-- dump date 20140619_091001 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 869729000001 SEQ_END SEQ_END NC_017630.1 114550 114550 DR NC_017630.1; contig end 114550..114550 Escherichia coli UM146 869729000002 SEQ_END SEQ_END NC_017632.1 4993013 4993013 DR NC_017632.1; contig end 4993013..4993013 Escherichia coli UM146 YP_006104018.1 CDS UM146_24031 NC_017630.1 41 199 R hypothetical protein complement(41..199) Escherichia coli UM146 12703351 YP_006104019.1 CDS UM146_24036 NC_017630.1 237 446 R putative regulator complement(237..446) Escherichia coli UM146 12703352 YP_006104020.1 CDS UM146_24041 NC_017630.1 492 953 R COG1525 Micrococcal nuclease (thermonuclease) homologs; putative nuclease complement(492..953) Escherichia coli UM146 12703353 YP_006104021.1 CDS UM146_24046 NC_017630.1 1539 2099 R conjugal transfer fertility inhibition protein FinO complement(1539..2099) Escherichia coli UM146 12703354 YP_006104022.1 CDS UM146_24051 NC_017630.1 2202 3062 R COG1073 Hydrolases of the alpha/beta superfamily; hypothetical protein complement(2202..3062) Escherichia coli UM146 12703355 YP_006104023.1 CDS UM146_24056 NC_017630.1 3121 3867 R conjugal transfer pilus acetylation protein TraX complement(3121..3867) Escherichia coli UM146 12703356 YP_006104024.1 CDS UM146_24061 NC_017630.1 3887 9157 R COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; conjugal transfer nickase/helicase TraI complement(3887..9157) Escherichia coli UM146 12703357 YP_006104025.1 CDS UM146_24066 NC_017630.1 9157 11301 R COG3505 Type IV secretory pathway, VirD4 components; conjugal transfer protein TraD complement(9157..11301) Escherichia coli UM146 12703358 YP_006104026.1 CDS UM146_24071 NC_017630.1 11352 12089 R hypothetical protein complement(11352..12089) Escherichia coli UM146 12703359 YP_006104027.1 CDS UM146_24076 NC_017630.1 12292 13023 R conjugal transfer surface exclusion protein TraT complement(12292..13023) Escherichia coli UM146 12703360 YP_006104028.1 CDS UM146_24081 NC_017630.1 13072 13557 R Surface exclusion inner membrane protein complement(13072..13557) Escherichia coli UM146 12703361 YP_006104029.1 CDS UM146_24086 NC_017630.1 13573 16395 R conjugal transfer mating pair stabilization protein TraG complement(13573..16395) Escherichia coli UM146 12703362 YP_006104030.1 CDS UM146_24091 NC_017630.1 16392 17765 R conjugal transfer pilus assembly protein TraH complement(16392..17765) Escherichia coli UM146 12703363 YP_006104031.1 CDS UM146_24096 NC_017630.1 17752 18411 R conjugal transfer protein TrbF complement(17752..18411) Escherichia coli UM146 12703364 YP_006104032.1 CDS UM146_24101 NC_017630.1 18401 18946 R conjugal transfer protein TrbB complement(18401..18946) Escherichia coli UM146 12703365 YP_006104033.1 CDS UM146_24106 NC_017630.1 18933 19217 R conjugal transfer pilin chaperone TraQ complement(18933..19217) Escherichia coli UM146 12703366 YP_006104034.1 CDS UM146_24111 NC_017630.1 19298 19633 D ArtA 19298..19633 Escherichia coli UM146 12703367 YP_006104035.1 CDS UM146_24116 NC_017630.1 19614 19955 R conjugal transfer protein TrbA complement(19614..19955) Escherichia coli UM146 12703368 YP_006104036.1 CDS UM146_24121 NC_017630.1 19969 20712 R conjugal pilus assembly protein TraF complement(19969..20712) Escherichia coli UM146 12703369 YP_006104037.1 CDS UM146_24126 NC_017630.1 20705 20962 R conjugal transfer protein TrbE complement(20705..20962) Escherichia coli UM146 12703370 YP_006104038.1 CDS UM146_24131 NC_017630.1 20989 22839 R COG1004 Predicted UDP-glucose 6-dehydrogenase; conjugal transfer mating pair stabilization protein TraN complement(20989..22839) Escherichia coli UM146 12703371 YP_006104039.1 CDS UM146_24136 NC_017630.1 22836 23474 R conjugal transfer pilus assembly protein TrbC complement(22836..23474) Escherichia coli UM146 12703372 YP_006104040.1 CDS UM146_24141 NC_017630.1 23483 23788 R hypothetical protein complement(23483..23788) Escherichia coli UM146 12703373 YP_006104041.1 CDS UM146_24146 NC_017630.1 23818 24216 R conjugal transfer pilus assembly protein TraU complement(23818..24216) Escherichia coli UM146 12703374 YP_006104042.1 CDS UM146_24151 NC_017630.1 24194 24811 R conjugal transfer pilus assembly protein TraU complement(24194..24811) Escherichia coli UM146 12703375 YP_006104043.1 CDS UM146_24156 NC_017630.1 24808 25440 R conjugal transfer pilus assembly protein TraW complement(24808..25440) Escherichia coli UM146 12703376 YP_006104044.1 CDS UM146_24161 NC_017630.1 25437 25823 R conjugal transfer protein TrbI complement(25437..25823) Escherichia coli UM146 12703377 YP_006104045.1 CDS UM146_24166 NC_017630.1 25820 28450 R COG3451 Type IV secretory pathway, VirB4 components; conjugal transfer ATP-binding protein TraC complement(25820..28450) Escherichia coli UM146 12703378 YP_006104046.1 CDS UM146_24171 NC_017630.1 28576 28674 R hypothetical protein complement(28576..28674) Escherichia coli UM146 12703379 YP_006104047.1 CDS UM146_24176 NC_017630.1 28819 29037 R hypothetical protein complement(28819..29037) Escherichia coli UM146 12703380 YP_006104048.1 CDS UM146_24181 NC_017630.1 29117 29590 R hypothetical protein complement(29117..29590) Escherichia coli UM146 12703381 YP_006104049.1 CDS UM146_24186 NC_017630.1 29583 29804 R COG1734 DnaK suppressor protein; conjugal transfer protein TraR complement(29583..29804) Escherichia coli UM146 12703382 YP_006104050.1 CDS UM146_24191 NC_017630.1 29939 30454 R COG1155 Archaeal/vacuolar-type H+-ATPase subunit A; conjugal transfer protein TraV complement(29939..30454) Escherichia coli UM146 12703383 YP_006104051.1 CDS UM146_24196 NC_017630.1 30451 30684 R conjugal transfer protein TrbG complement(30451..30684) Escherichia coli UM146 12703384 YP_006104052.1 CDS UM146_24201 NC_017630.1 30696 31016 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; conjugal transfer protein TrbD complement(30696..31016) Escherichia coli UM146 12703385 YP_006104053.1 CDS UM146_24206 NC_017630.1 31003 31593 R conjugal transfer protein TraP complement(31003..31593) Escherichia coli UM146 12703386 YP_006104054.1 CDS UM146_24211 NC_017630.1 31583 33010 R conjugal transfer pilus assembly protein TraB complement(31583..33010) Escherichia coli UM146 12703387 YP_006104055.1 CDS UM146_24216 NC_017630.1 33010 33681 R conjugal transfer protein TraK complement(33010..33681) Escherichia coli UM146 12703388 YP_006104056.1 CDS UM146_24221 NC_017630.1 33724 34290 R conjugal transfer pilus assembly protein TraE complement(33724..34290) Escherichia coli UM146 12703389 YP_006104057.1 CDS UM146_24226 NC_017630.1 34312 34623 R conjugal transfer pilus assembly protein TraL complement(34312..34623) Escherichia coli UM146 12703390 YP_006104058.1 CDS UM146_24231 NC_017630.1 34638 34997 R conjugal transfer pilin subunit TraA complement(34638..34997) Escherichia coli UM146 12703391 YP_006104059.1 CDS UM146_24236 NC_017630.1 35031 35258 R conjugal transfer protein TraY complement(35031..35258) Escherichia coli UM146 12703392 YP_006104060.1 CDS UM146_24241 NC_017630.1 35352 36038 R TraJ complement(35352..36038) Escherichia coli UM146 12703393 YP_006104061.1 CDS UM146_24246 NC_017630.1 36232 36615 R conjugal transfer protein TraM complement(36232..36615) Escherichia coli UM146 12703394 YP_006104062.1 CDS UM146_24251 NC_017630.1 37039 37548 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic transglycosylase 37039..37548 Escherichia coli UM146 12703395 YP_006104063.1 CDS UM146_24256 NC_017630.1 37845 38666 R hypothetical protein complement(37845..38666) Escherichia coli UM146 12703396 YP_006104064.1 CDS UM146_24261 NC_017630.1 39416 39751 D YubN 39416..39751 Escherichia coli UM146 12703397 YP_006104065.1 CDS UM146_24266 NC_017630.1 39988 40146 R small toxic polypeptide complement(39988..40146) Escherichia coli UM146 12703398 YP_006104066.1 CDS UM146_24271 NC_017630.1 39992 40204 R modulator of post-segregation killing protein complement(39992..40204) Escherichia coli UM146 12703399 YP_006104067.1 CDS UM146_24276 NC_017630.1 40422 41141 R plasmid SOS inhibition protein A complement(40422..41141) Escherichia coli UM146 12703400 YP_006104068.1 CDS psiB NC_017630.1 41138 41572 R plasmid SOS inhibition protein B complement(41138..41572) Escherichia coli UM146 12703401 YP_006104069.1 CDS UM146_24286 NC_017630.1 41627 43585 R COG1475 Predicted transcriptional regulators; hypothetical protein complement(41627..43585) Escherichia coli UM146 12703402 YP_006104070.1 CDS UM146_24291 NC_017630.1 43644 43877 R hypothetical protein complement(43644..43877) Escherichia coli UM146 12703403 YP_006104071.1 CDS UM146_24296 NC_017630.1 43934 44461 R COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein complement(43934..44461) Escherichia coli UM146 12703404 YP_006104072.1 CDS UM146_24301 NC_017630.1 44763 45221 D hypothetical protein 44763..45221 Escherichia coli UM146 12703405 YP_006104073.1 CDS UM146_24306 NC_017630.1 45307 45870 R COG0827 Adenine-specific DNA methylase; hypothetical protein complement(45307..45870) Escherichia coli UM146 12703406 YP_006104074.1 CDS UM146_24311 NC_017630.1 45917 47278 R hypothetical protein complement(45917..47278) Escherichia coli UM146 12703407 YP_006104075.1 CDS UM146_24316 NC_017630.1 47653 47790 R hypothetical protein complement(47653..47790) Escherichia coli UM146 12703408 YP_006104076.1 CDS UM146_24321 NC_017630.1 48522 48713 R hypothetical protein complement(48522..48713) Escherichia coli UM146 12703409 YP_006104077.1 CDS UM146_24326 NC_017630.1 48710 49132 R hypothetical protein complement(48710..49132) Escherichia coli UM146 12703410 YP_006104078.1 CDS UM146_24331 NC_017630.1 49179 49604 R hypothetical protein complement(49179..49604) Escherichia coli UM146 12703411 YP_006104079.1 CDS UM146_24336 NC_017630.1 49761 49901 D hypothetical protein 49761..49901 Escherichia coli UM146 12703412 YP_006104080.1 CDS UM146_24341 NC_017630.1 50020 50790 R hypothetical protein complement(50020..50790) Escherichia coli UM146 12703280 YP_006104081.1 CDS UM146_24346 NC_017630.1 50835 51269 R hypothetical protein complement(50835..51269) Escherichia coli UM146 12703281 YP_006104082.1 CDS UM146_24351 NC_017630.1 51283 51504 R putative cytoplasmic protein complement(51283..51504) Escherichia coli UM146 12703282 YP_006104083.1 CDS UM146_24356 NC_017630.1 51505 52188 R COG0863 DNA modification methylase; putative methylase complement(51505..52188) Escherichia coli UM146 12703283 YP_006104084.1 CDS UM146_24361 NC_017630.1 52572 52775 R hypothetical protein complement(52572..52775) Escherichia coli UM146 12703284 YP_006104085.1 CDS UM146_24366 NC_017630.1 52840 53988 D COG4584 Transposase and inactivated derivatives; putative transposase protein IstA 52840..53988 Escherichia coli UM146 12703285 YP_006104086.1 CDS UM146_24371 NC_017630.1 53988 54785 D COG1484 DNA replication protein; putative ATP-binding protein IstB 53988..54785 Escherichia coli UM146 12703286 YP_006104087.1 CDS UM146_24376 NC_017630.1 54779 55633 R hypothetical protein complement(54779..55633) Escherichia coli UM146 12703287 YP_006104088.1 CDS UM146_24381 NC_017630.1 55647 55916 R hypothetical protein complement(55647..55916) Escherichia coli UM146 12703288 YP_006104089.1 CDS UM146_24386 NC_017630.1 56028 57248 R COG3464 Transposase and inactivated derivatives; putative transposase protein complement(56028..57248) Escherichia coli UM146 12703289 YP_006104090.1 CDS UM146_24391 NC_017630.1 57267 57785 R COG4283 Uncharacterized conserved protein; hypothetical protein complement(57267..57785) Escherichia coli UM146 12703290 YP_006104091.1 CDS UM146_24396 NC_017630.1 57920 58168 D UV protection and mutation protein 57920..58168 Escherichia coli UM146 12703291 YP_006104092.1 CDS UM146_24401 NC_017630.1 58165 58602 D COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); DNA repair protein UmuD 58165..58602 Escherichia coli UM146 12703292 YP_006104093.1 CDS UM146_24416 NC_017630.1 59625 59873 D COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA polymerase V subunit UmuC 59625..59873 Escherichia coli UM146 12703293 YP_006104094.1 CDS UM146_24421 NC_017630.1 59878 60270 R putative stable plasmid inheritance protein complement(59878..60270) Escherichia coli UM146 12703294 YP_006104095.1 CDS UM146_24426 NC_017630.1 60275 61246 R COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit; stable plasmid inheritance protein StbA complement(60275..61246) Escherichia coli UM146 12703295 YP_006104096.1 CDS UM146_24431 NC_017630.1 61475 62119 D COG1192 ATPases involved in chromosome partitioning; hypothetical protein 61475..62119 Escherichia coli UM146 12703296 YP_006104097.1 CDS UM146_24436 NC_017630.1 62113 62388 D COG0587 DNA polymerase III, alpha subunit; hypothetical protein 62113..62388 Escherichia coli UM146 12703297 YP_006104098.1 CDS UM146_24451 NC_017630.1 63335 63640 R plasmid maintenance protein CcdB complement(63335..63640) Escherichia coli UM146 12703298 YP_006104099.1 CDS UM146_24456 NC_017630.1 63642 63860 R plasmid maintenance protein CcdA complement(63642..63860) Escherichia coli UM146 12703299 YP_006104100.1 CDS UM146_24461 NC_017630.1 65052 65219 D hypothetical protein 65052..65219 Escherichia coli UM146 12703300 YP_006104101.1 CDS UM146_24466 NC_017630.1 66045 66185 D hypothetical protein 66045..66185 Escherichia coli UM146 12703301 YP_006104102.1 CDS UM146_24471 NC_017630.1 68021 68974 D IncFIB replication protein RepA 68021..68974 Escherichia coli UM146 12703302 YP_006104103.1 CDS UM146_24476 NC_017630.1 69217 69957 R COG0582 Integrase; putative site-specific recombinase protein complement(69217..69957) Escherichia coli UM146 12703303 YP_006104104.1 CDS UM146_24491 NC_017630.1 73366 73557 R COG2801 Transposase and inactivated derivatives; insertion element IS2 transposase InsD complement(73366..73557) Escherichia coli UM146 12703304 YP_006104105.1 CDS UM146_24496 NC_017630.1 73515 73880 R COG2963 Transposase and inactivated derivatives; insertion sequence 2 OrfA protein complement(73515..73880) Escherichia coli UM146 12703305 YP_006104106.1 CDS UM146_24501 NC_017630.1 74162 76132 D COG1629 Outer membrane receptor proteins, mostly Fe transport; putative hemin receptor 74162..76132 Escherichia coli UM146 12703306 YP_006104107.1 CDS UM146_24506 NC_017630.1 76139 76930 D COG5266 ABC-type Co2+ transport system, periplasmic component; hypothetical protein 76139..76930 Escherichia coli UM146 12703307 YP_006104108.1 CDS UM146_24511 NC_017630.1 76993 77424 R COG3436 Transposase and inactivated derivatives; hypothetical protein complement(76993..77424) Escherichia coli UM146 12703308 YP_006104109.1 CDS UM146_24516 NC_017630.1 77669 78448 R COG1484 DNA replication protein; transposase/IS protein complement(77669..78448) Escherichia coli UM146 12703309 YP_006104110.1 CDS UM146_24521 NC_017630.1 78448 79470 R COG4584 Transposase and inactivated derivatives; putative transposase complement(78448..79470) Escherichia coli UM146 12703310 YP_006104111.1 CDS UM146_24526 NC_017630.1 79484 80242 R COG3436 Transposase and inactivated derivatives; transposase complement(79484..80242) Escherichia coli UM146 12703311 YP_006104112.1 CDS UM146_24531 NC_017630.1 80244 80501 R COG3436 Transposase and inactivated derivatives; transposase complement(80244..80501) Escherichia coli UM146 12703312 YP_006104113.1 CDS UM146_24536 NC_017630.1 80550 80897 R COG3436 Transposase and inactivated derivatives; IS66 family element complement(80550..80897) Escherichia coli UM146 12703313 YP_006104114.1 CDS UM146_24541 NC_017630.1 80894 81298 R COG2963 Transposase and inactivated derivatives; ISSfl3 protein complement(80894..81298) Escherichia coli UM146 12703314 YP_006104115.1 CDS UM146_24546 NC_017630.1 81327 81683 R COG2801 Transposase and inactivated derivatives; transposase complement(81327..81683) Escherichia coli UM146 12703315 YP_006104116.1 CDS UM146_24551 NC_017630.1 81800 83323 R COG3344 Retron-type reverse transcriptase; putative group II intron-encoded reverse transcriptase complement(81800..83323) Escherichia coli UM146 12703316 YP_006104117.1 CDS UM146_24556 NC_017630.1 83915 84139 R COG2801 Transposase and inactivated derivatives; transposase for insertion sequence element complement(83915..84139) Escherichia coli UM146 12703317 YP_006104118.1 CDS UM146_24561 NC_017630.1 84417 85916 D COG4584 Transposase and inactivated derivatives; hypothetical protein 84417..85916 Escherichia coli UM146 12703318 YP_006104119.1 CDS UM146_24566 NC_017630.1 85913 86668 D COG1484 DNA replication protein; putative IS element ATP-binding protein 85913..86668 Escherichia coli UM146 12703319 YP_006104120.1 CDS UM146_24571 NC_017630.1 86810 87136 R COG2963 Transposase and inactivated derivatives; IS629 orfA complement(86810..87136) Escherichia coli UM146 12703320 YP_006104121.1 CDS UM146_24576 NC_017630.1 87201 87467 D IS1294 transposase 87201..87467 Escherichia coli UM146 12703321 YP_006104122.1 CDS UM146_24581 NC_017630.1 87990 89264 R COG3391 Uncharacterized conserved protein; putative enterotoxin protein SenB complement(87990..89264) Escherichia coli UM146 12703322 YP_006104123.1 CDS UM146_24586 NC_017630.1 89234 91495 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent colicin J protein CjrC complement(89234..91495) Escherichia coli UM146 12703323 YP_006104124.1 CDS UM146_24591 NC_017630.1 91664 92440 R COG0810 Periplasmic protein TonB, links inner and outer membranes; TonB-dependent colicin J protein CjrB complement(91664..92440) Escherichia coli UM146 12703324 YP_006104125.1 CDS UM146_24596 NC_017630.1 92448 93365 R COG3016 Uncharacterized iron-regulated protein; CjrA complement(92448..93365) Escherichia coli UM146 12703325 YP_006104126.1 CDS UM146_24601 NC_017630.1 93655 94221 R hypothetical protein complement(93655..94221) Escherichia coli UM146 12703326 YP_006104127.1 CDS UM146_24606 NC_017630.1 94472 94564 R hypothetical protein complement(94472..94564) Escherichia coli UM146 12703327 YP_006104128.1 CDS UM146_24611 NC_017630.1 94798 94980 D hypothetical protein 94798..94980 Escherichia coli UM146 12703328 YP_006104129.1 CDS UM146_24616 NC_017630.1 95793 96128 R COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; immunity protein complement(95793..96128) Escherichia coli UM146 12703329 YP_006104130.1 CDS UM146_24621 NC_017630.1 96624 97133 R YdeA complement(96624..97133) Escherichia coli UM146 12703330 YP_006104131.1 CDS UM146_24626 NC_017630.1 97130 97390 R hypothetical protein complement(97130..97390) Escherichia coli UM146 12703331 YP_006104132.1 CDS UM146_24631 NC_017630.1 97492 97818 D COG2963 Transposase and inactivated derivatives; putative IS629 transposase OrfA 97492..97818 Escherichia coli UM146 12703332 YP_006104133.1 CDS UM146_24636 NC_017630.1 97815 98297 D COG2801 Transposase and inactivated derivatives; transposase ORF B, IS629 97815..98297 Escherichia coli UM146 12703333 YP_006104134.1 CDS UM146_24641 NC_017630.1 98889 99392 D COG3344 Retron-type reverse transcriptase; putative transposase protein 98889..99392 Escherichia coli UM146 12703334 YP_006104135.1 CDS UM146_24646 NC_017630.1 99431 99751 R hypothetical protein complement(99431..99751) Escherichia coli UM146 12703335 YP_006104136.1 CDS UM146_24651 NC_017630.1 99726 100175 R putative glucose-1-phosphatase complement(99726..100175) Escherichia coli UM146 12703336 YP_006104137.1 CDS UM146_24656 NC_017630.1 100297 100782 R hypothetical protein complement(100297..100782) Escherichia coli UM146 12703337 YP_006104138.1 CDS UM146_24661 NC_017630.1 100807 101292 R COG0526 Thiol-disulfide isomerase and thioredoxins; putative disulfide reductase complement(100807..101292) Escherichia coli UM146 12703338 YP_006104139.1 CDS UM146_24666 NC_017630.1 101279 101974 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; molybdenum transport ATP-binding protein modC complement(101279..101974) Escherichia coli UM146 12703339 YP_006104140.1 CDS UM146_24671 NC_017630.1 101990 103108 R COG0577 ABC-type antimicrobial peptide transport system, permease component; putative ABC transporter permease complement(101990..103108) Escherichia coli UM146 12703340 YP_006104141.1 CDS UM146_24676 NC_017630.1 103098 104381 R COG0577 ABC-type antimicrobial peptide transport system, permease component; ABC transporter complement(103098..104381) Escherichia coli UM146 12703341 YP_006104142.1 CDS UM146_24681 NC_017630.1 104384 105763 R COG4393 Predicted membrane protein; hypothetical protein complement(104384..105763) Escherichia coli UM146 12703342 YP_006104143.1 CDS UM146_24686 NC_017630.1 105867 106394 R COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport; hypothetical protein complement(105867..106394) Escherichia coli UM146 12703343 YP_006104144.1 CDS UM146_24691 NC_017630.1 108667 109428 R COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC; Na(+)-translocating NADH-quinone reductase subunit C complement(108667..109428) Escherichia coli UM146 12703344 YP_006104145.1 CDS UM146_24696 NC_017630.1 109665 110171 R COG0526 Thiol-disulfide isomerase and thioredoxins; suppressor for copper-sensitivity ScsD complement(109665..110171) Escherichia coli UM146 12703345 YP_006104146.1 CDS UM146_24701 NC_017630.1 110161 110319 R COG1651 Protein-disulfide isomerase; hypothetical protein complement(110161..110319) Escherichia coli UM146 12703346 YP_006104147.1 CDS UM146_24706 NC_017630.1 110418 111122 R COG3316 Transposase and inactivated derivatives; IS26 transposase protein complement(110418..111122) Escherichia coli UM146 12703347 YP_006104148.1 CDS UM146_24711 NC_017630.1 112178 113035 R replication protein complement(112178..113035) Escherichia coli UM146 12703348 YP_006104149.1 CDS UM146_24716 NC_017630.1 113335 113595 R COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; replication protein complement(113335..113595) Escherichia coli UM146 12703349 YP_006104150.1 CDS UM146_24721 NC_017630.1 113835 114425 R COG1112 Superfamily I DNA and RNA helicases and helicase subunits; hypothetical protein complement(113835..114425) Escherichia coli UM146 12703350 YP_006108944.1 CDS UM146_00005 NC_017632.1 1292 2050 R COG1126 ABC-type polar amino acid transport system, ATPase component; amino-acid transporter subunit ; ATP-binding component of ABC superfamily protein complement(1292..2050) Escherichia coli UM146 12703037 YP_006108945.1 CDS UM146_00010 NC_017632.1 2058 3161 R COG0765 ABC-type amino acid transport system, permease component; putative transport system permease complement(2058..3161) Escherichia coli UM146 12703039 YP_006108946.1 CDS UM146_00015 NC_017632.1 3171 4352 R COG4597 ABC-type amino acid transport system, permease component; amino-acid transporter subunit ; membrane component of ABC superfamily protein complement(3171..4352) Escherichia coli UM146 12703276 YP_006108947.1 CDS UM146_00020 NC_017632.1 4420 5445 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; periplasmic binding transport protein; periplasmic-binding component of ABC superfamily complement(4420..5445) Escherichia coli UM146 12703277 YP_006108948.1 CDS UM146_00025 NC_017632.1 5876 6097 R hypothetical protein complement(5876..6097) Escherichia coli UM146 12703278 YP_006108949.1 CDS UM146_00030 NC_017632.1 6203 6328 D hypothetical protein 6203..6328 Escherichia coli UM146 12702728 YP_006108950.1 CDS UM146_00035 NC_017632.1 6350 9454 R COG0841 Cation/multidrug efflux pump; multidrug efflux system protein complement(6350..9454) Escherichia coli UM146 12698521 YP_006108951.1 CDS UM146_00040 NC_017632.1 9466 10623 R COG0845 Membrane-fusion protein; hypothetical protein complement(9466..10623) Escherichia coli UM146 12698522 YP_006108952.1 CDS UM146_00045 NC_017632.1 11025 11687 D COG1309 Transcriptional regulator; DNA-binding transcriptional regulator EnvR 11025..11687 Escherichia coli UM146 12698523 YP_006108953.1 CDS UM146_00050 NC_017632.1 11690 11869 R hypothetical protein complement(11690..11869) Escherichia coli UM146 12698524 YP_006108954.1 CDS UM146_00055 NC_017632.1 11953 12837 R COG0863 DNA modification methylase; putative methyltransferase complement(11953..12837) Escherichia coli UM146 12698525 YP_006108955.1 CDS fis NC_017632.1 12925 13221 R COG2901 Factor for inversion stimulation Fis, transcriptional activator; DNA-binding protein Fis complement(12925..13221) Escherichia coli UM146 12698526 YP_006108956.1 CDS UM146_00065 NC_017632.1 13247 14092 R COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase B complement(13247..14092) Escherichia coli UM146 12698527 YP_006108957.1 CDS prmA NC_017632.1 14541 15422 R COG2264 Ribosomal protein L11 methylase; 50S ribosomal protein L11 methyltransferase complement(14541..15422) Escherichia coli UM146 12698528 YP_006108958.1 CDS panF NC_017632.1 15434 16885 R COG4145 Na+/panthothenate symporter; sodium/panthothenate symporter complement(15434..16885) Escherichia coli UM146 12698529 YP_006108959.1 CDS UM146_00080 NC_017632.1 16875 17117 R COG3924 Predicted membrane protein; hypothetical protein complement(16875..17117) Escherichia coli UM146 12698530 YP_006108960.1 CDS UM146_00085 NC_017632.1 17210 18166 R COG0524 Sugar kinases, ribokinase family; ribokinase family sugar kinase complement(17210..18166) Escherichia coli UM146 12698531 YP_006108961.1 CDS UM146_00090 NC_017632.1 18177 19007 R COG1349 Transcriptional regulators of sugar metabolism; putative DNA-binding transcriptional regulator complement(18177..19007) Escherichia coli UM146 12698532 YP_006108962.1 CDS gatY NC_017632.1 19348 20202 D COG0191 Fructose/tagatose bisphosphate aldolase; tagatose-bisphosphate aldolase 19348..20202 Escherichia coli UM146 12698533 YP_006108963.1 CDS UM146_00100 NC_017632.1 20238 21128 D COG1879 ABC-type sugar transport system, periplasmic component; putative sugar ABC transporter periplasmic protein 20238..21128 Escherichia coli UM146 12698534 YP_006108964.1 CDS UM146_00105 NC_017632.1 21189 22688 D COG1129 ABC-type sugar transport system, ATPase component; putative ribose transport ATP-binding protein RbsA 21189..22688 Escherichia coli UM146 12698535 YP_006108965.1 CDS UM146_00110 NC_017632.1 22689 23678 D COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; putative sugar transporter subunit: membrane component of ABC superfamily protein 22689..23678 Escherichia coli UM146 12698536 YP_006108966.1 CDS UM146_00125 NC_017632.1 24658 25704 D hypothetical protein 24658..25704 Escherichia coli UM146 12698537 YP_006108967.1 CDS UM146_00130 NC_017632.1 25796 27145 R COG0439 Biotin carboxylase; acetyl-CoA carboxylase biotin carboxylase subunit complement(25796..27145) Escherichia coli UM146 12698538 YP_006108968.1 CDS UM146_00135 NC_017632.1 27156 27626 R COG0511 Biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(27156..27626) Escherichia coli UM146 12698539 YP_006108969.1 CDS UM146_00140 NC_017632.1 28031 28195 R COG2717 Predicted membrane protein; hypothetical protein complement(28031..28195) Escherichia coli UM146 12698540 YP_006108970.1 CDS UM146_00145 NC_017632.1 28604 29578 R COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; putative oxidoreductase, Zn-dependent and NAD(P)-binding protein complement(28604..29578) Escherichia coli UM146 12698541 YP_006108971.1 CDS UM146_00150 NC_017632.1 29730 31670 D COG2199 FOG: GGDEF domain; regulatory protein CsrD 29730..31670 Escherichia coli UM146 12698542 YP_006108972.1 CDS UM146_00155 NC_017632.1 31975 33018 D COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB 31975..33018 Escherichia coli UM146 12698543 YP_006108973.1 CDS UM146_00160 NC_017632.1 33084 34187 D COG1792 Cell shape-determining protein; rod shape-determining protein MreC 33084..34187 Escherichia coli UM146 12698544 YP_006108974.1 CDS UM146_00165 NC_017632.1 34072 34203 D hypothetical protein 34072..34203 Escherichia coli UM146 12698545 YP_006108975.1 CDS UM146_00170 NC_017632.1 34187 34675 D COG2891 Cell shape-determining protein; rod shape-determining protein MreD 34187..34675 Escherichia coli UM146 12698546 YP_006108976.1 CDS UM146_00175 NC_017632.1 34684 35277 D COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 34684..35277 Escherichia coli UM146 12698547 YP_006108977.1 CDS UM146_00180 NC_017632.1 35267 36736 D COG1530 Ribonucleases G and E; ribonuclease G 35267..36736 Escherichia coli UM146 12698548 YP_006108978.1 CDS UM146_00185 NC_017632.1 36813 40604 D COG3164 Predicted membrane protein; hypothetical protein 36813..40604 Escherichia coli UM146 12698549 YP_006108979.1 CDS tldD NC_017632.1 40760 42205 D COG0312 Predicted Zn-dependent proteases and their inactivated homologs; protease TldD 40760..42205 Escherichia coli UM146 12698550 YP_006108980.1 CDS UM146_00195 NC_017632.1 42333 43244 R COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator complement(42333..43244) Escherichia coli UM146 12698551 YP_006108981.1 CDS UM146_00200 NC_017632.1 43445 43648 D hypothetical protein 43445..43648 Escherichia coli UM146 12698552 YP_006108982.1 CDS UM146_00205 NC_017632.1 43656 44588 D COG1566 Multidrug resistance efflux pump; p-hydroxybenzoic acid efflux subunit AaeA 43656..44588 Escherichia coli UM146 12698553 YP_006108983.1 CDS UM146_00210 NC_017632.1 44594 46561 D COG1289 Predicted membrane protein; p-hydroxybenzoic acid efflux subunit AaeB 44594..46561 Escherichia coli UM146 12698554 YP_006108984.1 CDS UM146_00215 NC_017632.1 46653 46925 D COG2732 Barstar, RNAse (barnase) inhibitor; putative barnase inhibitor 46653..46925 Escherichia coli UM146 12698555 YP_006108985.1 CDS UM146_00220 NC_017632.1 46980 47243 R hypothetical protein complement(46980..47243) Escherichia coli UM146 12698556 YP_006108986.1 CDS UM146_00225 NC_017632.1 47607 48077 R COG1438 Arginine repressor; arginine repressor complement(47607..48077) Escherichia coli UM146 12698557 YP_006108987.1 CDS UM146_00230 NC_017632.1 48512 49450 D COG0039 Malate/lactate dehydrogenases; malate dehydrogenase 48512..49450 Escherichia coli UM146 12698558 YP_006108988.1 CDS UM146_00235 NC_017632.1 49512 50579 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine endoprotease complement(49512..50579) Escherichia coli UM146 12698559 YP_006108989.1 CDS UM146_00240 NC_017632.1 50669 52036 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine endoprotease complement(50669..52036) Escherichia coli UM146 12698560 YP_006108990.1 CDS UM146_00245 NC_017632.1 52190 52588 R COG3105 Uncharacterized protein conserved in bacteria; cytochrome d ubiquinol oxidase subunit III complement(52190..52588) Escherichia coli UM146 12698561 YP_006108991.1 CDS UM146_00250 NC_017632.1 52782 53909 D COG1485 Predicted ATPase; hypothetical protein 52782..53909 Escherichia coli UM146 12698562 YP_006108992.1 CDS rplM NC_017632.1 54129 54557 D COG0102 Ribosomal protein L13; 50S ribosomal protein L13 54129..54557 Escherichia coli UM146 12698563 YP_006108993.1 CDS rpsI NC_017632.1 54573 54965 D COG0103 Ribosomal protein S9; 30S ribosomal protein S9 54573..54965 Escherichia coli UM146 12698564 YP_006108994.1 CDS sspA NC_017632.1 55360 55998 D COG0625 Glutathione S-transferase; stringent starvation protein A 55360..55998 Escherichia coli UM146 12698565 YP_006108995.1 CDS UM146_00270 NC_017632.1 56004 56501 D COG2969 Stringent starvation protein B; ClpXP protease specificity-enhancing factor 56004..56501 Escherichia coli UM146 12698566 YP_006108996.1 CDS UM146_00275 NC_017632.1 56618 57400 D COG2186 Transcriptional regulators; transcriptional regulator NanR 56618..57400 Escherichia coli UM146 12698567 YP_006108997.1 CDS UM146_00280 NC_017632.1 57522 58415 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; N-acetylneuraminate lyase 57522..58415 Escherichia coli UM146 12698568 YP_006108998.1 CDS UM146_00285 NC_017632.1 58524 60014 D COG0477 Permeases of the major facilitator superfamily; putative sialic acid transporter 58524..60014 Escherichia coli UM146 12698569 YP_006108999.1 CDS UM146_00290 NC_017632.1 60062 60751 D COG3010 Putative N-acetylmannosamine-6-phosphate epimerase; N-acetylmannosamine-6-phosphate 2-epimerase 60062..60751 Escherichia coli UM146 12698570 YP_006109000.1 CDS UM146_00295 NC_017632.1 60748 61623 D COG1940 Transcriptional regulator/sugar kinase; N-acetylmannosamine kinase 60748..61623 Escherichia coli UM146 12698571 YP_006109001.1 CDS UM146_00300 NC_017632.1 61620 62084 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 61620..62084 Escherichia coli UM146 12698572 YP_006109002.1 CDS gltD NC_017632.1 62152 63570 R COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; glutamate synthase subunit beta complement(62152..63570) Escherichia coli UM146 12698573 YP_006109003.1 CDS gltB NC_017632.1 63583 67791 R COG0067 Glutamate synthase domain 1; glutamate synthase subunit alpha complement(63583..67791) Escherichia coli UM146 12698574 YP_006109004.1 CDS gltB NC_017632.1 67812 68150 R COG0067 Glutamate synthase domain 1; glutamate synthase subunit alpha complement(67812..68150) Escherichia coli UM146 12698575 YP_006109005.1 CDS UM146_00320 NC_017632.1 68567 68671 D hypothetical protein 68567..68671 Escherichia coli UM146 12698576 YP_006109006.1 CDS UM146_00325 NC_017632.1 68717 69646 D COG1242 Predicted Fe-S oxidoreductase; putative Fe-S oxidoreductase 68717..69646 Escherichia coli UM146 12698577 YP_006109007.1 CDS UM146_00330 NC_017632.1 69742 72078 D COG0642 Signal transduction histidine kinase; aerobic respiration control sensor protein ArcB 69742..72078 Escherichia coli UM146 12698578 YP_006109008.1 CDS UM146_00335 NC_017632.1 72308 72961 D COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; isoprenoid biosynthesis protein 72308..72961 Escherichia coli UM146 12698579 YP_006109009.1 CDS mtgA NC_017632.1 72958 73686 D COG0744 Membrane carboxypeptidase (penicillin-binding protein); monofunctional biosynthetic peptidoglycan transglycosylase 72958..73686 Escherichia coli UM146 12698580 YP_006109010.1 CDS UM146_00345 NC_017632.1 73683 74315 R hypothetical protein complement(73683..74315) Escherichia coli UM146 12698581 YP_006109011.1 CDS UM146_00350 NC_017632.1 74529 74801 R COG1925 Phosphotransferase system, HPr-related proteins; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) complement(74529..74801) Escherichia coli UM146 12698582 YP_006109012.1 CDS UM146_00355 NC_017632.1 74798 75652 R COG1660 Predicted P-loop-containing kinase; hypothetical protein complement(74798..75652) Escherichia coli UM146 12698583 YP_006109013.1 CDS UM146_00360 NC_017632.1 75698 76189 R COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(75698..76189) Escherichia coli UM146 12698584 YP_006109014.1 CDS UM146_00365 NC_017632.1 76307 76594 R COG1544 Ribosome-associated protein Y (PSrp-1); putative sigma(54) modulation protein complement(76307..76594) Escherichia coli UM146 12698585 YP_006109015.1 CDS UM146_00370 NC_017632.1 76617 78050 R COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 complement(76617..78050) Escherichia coli UM146 12698586 YP_006109016.1 CDS UM146_00375 NC_017632.1 78098 78823 R COG1137 ABC-type (unclassified) transport system, ATPase component; putative ABC transporter ATP-binding protein YhbG complement(78098..78823) Escherichia coli UM146 12698587 YP_006109017.1 CDS UM146_00380 NC_017632.1 78830 79387 R COG1934 Uncharacterized protein conserved in bacteria; lipopolysaccharide transport periplasmic protein LptA complement(78830..79387) Escherichia coli UM146 12698588 YP_006109018.1 CDS UM146_00385 NC_017632.1 79356 79931 R COG3117 Uncharacterized protein conserved in bacteria; hypothetical protein complement(79356..79931) Escherichia coli UM146 12698589 YP_006109019.1 CDS UM146_00390 NC_017632.1 79928 80494 R COG1778 Low specificity phosphatase (HAD superfamily); 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(79928..80494) Escherichia coli UM146 12698590 YP_006109020.1 CDS UM146_00395 NC_017632.1 80515 81501 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; D-arabinose 5-phosphate isomerase complement(80515..81501) Escherichia coli UM146 12698591 YP_006109021.1 CDS UM146_00400 NC_017632.1 81515 82492 R COG0530 Ca2+/Na+ antiporter; putative calcium/sodium:proton antiporter complement(81515..82492) Escherichia coli UM146 12698592 YP_006109022.1 CDS UM146_00405 NC_017632.1 82702 83511 D COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; putative ABC transporter ATP-binding protein YrbF 82702..83511 Escherichia coli UM146 12698593 YP_006109023.1 CDS UM146_00410 NC_017632.1 83519 84301 D COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; toluene ABC transporter permease 83519..84301 Escherichia coli UM146 12698594 YP_006109024.1 CDS UM146_00415 NC_017632.1 84306 84857 D COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; hypothetical protein 84306..84857 Escherichia coli UM146 12698595 YP_006109025.1 CDS UM146_00420 NC_017632.1 84876 85511 D COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component; toluene tolerance protein Ttg2D 84876..85511 Escherichia coli UM146 12698596 YP_006109026.1 CDS UM146_00425 NC_017632.1 85511 85804 D COG3113 Predicted NTP binding protein (contains STAS domain); hypothetical protein 85511..85804 Escherichia coli UM146 12698597 YP_006109027.1 CDS UM146_00430 NC_017632.1 85949 86218 D COG5007 Predicted transcriptional regulator, BolA superfamily; putative transcriptional regulator, BolA superfamily protein 85949..86218 Escherichia coli UM146 12698598 YP_006109028.1 CDS UM146_00435 NC_017632.1 86273 87532 D COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 86273..87532 Escherichia coli UM146 12698599 YP_006109029.1 CDS UM146_00440 NC_017632.1 87580 87858 R COG3423 Predicted transcriptional regulator; DNA-binding transcriptional regulator Nlp complement(87580..87858) Escherichia coli UM146 12698600 YP_006109030.1 CDS UM146_00445 NC_017632.1 88091 89062 R COG0142 Geranylgeranyl pyrophosphate synthase; octaprenyl diphosphate synthase complement(88091..89062) Escherichia coli UM146 12698601 YP_006109031.1 CDS rplU NC_017632.1 89320 89631 D COG0261 Ribosomal protein L21; 50S ribosomal protein L21 89320..89631 Escherichia coli UM146 12698602 YP_006109032.1 CDS rpmA NC_017632.1 89652 89909 D COG0211 Ribosomal protein L27; 50S ribosomal protein L27 89652..89909 Escherichia coli UM146 12698603 YP_006109033.1 CDS UM146_00460 NC_017632.1 90036 91001 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 90036..91001 Escherichia coli UM146 12698604 YP_006109034.1 CDS obgE NC_017632.1 91017 92177 D COG0536 Predicted GTPase; GTPase ObgE 91017..92177 Escherichia coli UM146 12698605 YP_006109035.1 CDS UM146_00470 NC_017632.1 92218 93651 R COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); D-alanyl-D-alanine carboxypeptidase complement(92218..93651) Escherichia coli UM146 12698606 YP_006109036.1 CDS greA NC_017632.1 93899 94375 D COG0782 Transcription elongation factor; transcription elongation factor GreA 93899..94375 Escherichia coli UM146 12698607 YP_006109037.1 CDS UM146_00480 NC_017632.1 94531 94824 R COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; RNA-binding protein YhbY complement(94531..94824) Escherichia coli UM146 12698608 YP_006109038.1 CDS rrmJ NC_017632.1 94950 95579 D COG0293 23S rRNA methylase; 23S rRNA methyltransferase J 94950..95579 Escherichia coli UM146 12698609 YP_006109039.1 CDS hflB NC_017632.1 95679 97613 D COG0465 ATP-dependent Zn proteases; ATP-dependent metalloprotease 95679..97613 Escherichia coli UM146 12698610 YP_006109040.1 CDS folP NC_017632.1 97703 98551 D COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 97703..98551 Escherichia coli UM146 12698611 YP_006109041.1 CDS glmM NC_017632.1 98544 99881 D COG1109 Phosphomannomutase; phosphoglucosamine mutase 98544..99881 Escherichia coli UM146 12698612 YP_006109042.1 CDS secG NC_017632.1 100109 100441 D COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG 100109..100441 Escherichia coli UM146 12698613 YP_006109043.1 CDS UM146_00510 NC_017632.1 100995 102620 D COG2194 Predicted membrane-associated, metal-dependent hydrolase; putative hydrolase, inner membrane 100995..102620 Escherichia coli UM146 12698615 YP_006109044.1 CDS UM146_00515 NC_017632.1 102628 103971 R COG0137 Argininosuccinate synthase; argininosuccinate synthase complement(102628..103971) Escherichia coli UM146 12698616 YP_006109045.1 CDS UM146_00520 NC_017632.1 104632 105054 D COG0779 Uncharacterized protein conserved in bacteria; hypothetical protein 104632..105054 Escherichia coli UM146 12698618 YP_006109046.1 CDS nusA NC_017632.1 105082 106569 D COG0195 Transcription elongation factor; transcription elongation factor NusA 105082..106569 Escherichia coli UM146 12698619 YP_006109047.1 CDS infB NC_017632.1 106594 109266 D COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 106594..109266 Escherichia coli UM146 12698620 YP_006109048.1 CDS rbfA NC_017632.1 109430 109831 D COG0858 Ribosome-binding factor A; ribosome-binding factor A 109430..109831 Escherichia coli UM146 12698621 YP_006109049.1 CDS truB NC_017632.1 109831 110775 D COG0130 Pseudouridine synthase; tRNA pseudouridine synthase B 109831..110775 Escherichia coli UM146 12698622 YP_006109050.1 CDS rpsO NC_017632.1 110924 111193 D COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 110924..111193 Escherichia coli UM146 12698623 YP_006109051.1 CDS UM146_00550 NC_017632.1 111440 113575 D COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase 111440..113575 Escherichia coli UM146 12698624 YP_006109052.1 CDS UM146_00555 NC_017632.1 113684 114568 D COG4785 Lipoprotein NlpI, contains TPR repeats; lipoprotein NlpI 113684..114568 Escherichia coli UM146 12698625 YP_006109053.1 CDS UM146_00560 NC_017632.1 114748 116637 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase DeaD 114748..116637 Escherichia coli UM146 12698626 YP_006109054.1 CDS UM146_00565 NC_017632.1 116875 118035 D COG0814 Amino acid permeases; tryptophan permease 116875..118035 Escherichia coli UM146 12698627 YP_006109055.1 CDS UM146_00570 NC_017632.1 118153 119160 R COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; hypothetical protein complement(118153..119160) Escherichia coli UM146 12698628 YP_006109056.1 CDS UM146_00575 NC_017632.1 119241 120119 R COG0826 Collagenase and related proteases; putative protease complement(119241..120119) Escherichia coli UM146 12698629 YP_006109057.1 CDS UM146_00580 NC_017632.1 120128 121123 R COG0826 Collagenase and related proteases; peptidase (collagenase-like) protein complement(120128..121123) Escherichia coli UM146 12698630 YP_006109058.1 CDS UM146_00585 NC_017632.1 121332 121856 D COG3154 Putative lipid carrier protein; hypothetical protein 121332..121856 Escherichia coli UM146 12698631 YP_006109059.1 CDS UM146_00590 NC_017632.1 121850 122353 D COG3153 Predicted acetyltransferase; hypothetical protein 121850..122353 Escherichia coli UM146 12698632 YP_006109060.1 CDS UM146_00595 NC_017632.1 122340 122642 R COG2827 Predicted endonuclease containing a URI domain; GIY-YIG nuclease superfamily protein complement(122340..122642) Escherichia coli UM146 12698633 YP_006109061.1 CDS UM146_00600 NC_017632.1 122693 123136 D COG3787 Uncharacterized protein conserved in bacteria; hypothetical protein 122693..123136 Escherichia coli UM146 12698634 YP_006109062.1 CDS UM146_00605 NC_017632.1 123116 123634 R COG0693 Putative intracellular protease/amidase; putative intracellular protease complement(123116..123634) Escherichia coli UM146 12698635 YP_006109063.1 CDS UM146_00610 NC_017632.1 123762 124397 D COG0702 Predicted nucleoside-diphosphate-sugar epimerases; putative nucleoside-diphosphate-sugar epimerase 123762..124397 Escherichia coli UM146 12698636 YP_006109064.1 CDS UM146_00615 NC_017632.1 124470 125510 D COG0701 Predicted permeases; putative permease 124470..125510 Escherichia coli UM146 12698637 YP_006109065.1 CDS UM146_00620 NC_017632.1 125623 126198 R COG2823 Predicted periplasmic or secreted lipoprotein; hypothetical protein complement(125623..126198) Escherichia coli UM146 12698638 YP_006109066.1 CDS UM146_00625 NC_017632.1 126208 126798 R COG0279 Phosphoheptose isomerase; DnaA initiator-associating protein DiaA complement(126208..126798) Escherichia coli UM146 12698639 YP_006109067.1 CDS UM146_00630 NC_017632.1 126818 127213 R COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; hypothetical protein complement(126818..127213) Escherichia coli UM146 12698640 YP_006109068.1 CDS UM146_00635 NC_017632.1 127171 129207 R COG3107 Putative lipoprotein; hypothetical protein complement(127171..129207) Escherichia coli UM146 12698641 YP_006109069.1 CDS UM146_00640 NC_017632.1 129272 130135 D COG0313 Predicted methyltransferases; putative methyltransferase 129272..130135 Escherichia coli UM146 12698642 YP_006109070.1 CDS UM146_00645 NC_017632.1 130185 130952 R COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; galactosamine-6-phosphate isomerase complement(130185..130952) Escherichia coli UM146 12698643 YP_006109071.1 CDS UM146_00650 NC_017632.1 130953 131744 R COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; N-acetylgalactosamine-specific PTS system transporter subunit IID complement(130953..131744) Escherichia coli UM146 12698644 YP_006109072.1 CDS UM146_00655 NC_017632.1 131734 132537 R COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; N-acetylgalactosamine-specific PTS system transporter subunit IIC complement(131734..132537) Escherichia coli UM146 12698645 YP_006109073.1 CDS UM146_00660 NC_017632.1 132576 133052 R COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; N-acetylgalactosamine-specific PTS system transporter subunit IIB complement(132576..133052) Escherichia coli UM146 12698646 YP_006109074.1 CDS kbaY NC_017632.1 133219 134079 R COG0191 Fructose/tagatose bisphosphate aldolase; tagatose-bisphosphate aldolase complement(133219..134079) Escherichia coli UM146 12698647 YP_006109075.1 CDS UM146_00670 NC_017632.1 134092 135246 R COG2222 Predicted phosphosugar isomerases; tagatose-6-phosphate ketose/aldose isomerase complement(134092..135246) Escherichia coli UM146 12698648 YP_006109076.1 CDS UM146_00675 NC_017632.1 135595 136728 R COG1820 N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase complement(135595..136728) Escherichia coli UM146 12698649 YP_006109077.1 CDS UM146_00680 NC_017632.1 136725 137159 R COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; PTS system mannose/sorbose-specific transporter subunit IIA complement(136725..137159) Escherichia coli UM146 12698650 YP_006109078.1 CDS UM146_00685 NC_017632.1 137177 138055 R COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; putative hexose/hexosamine family PTS permease IID component complement(137177..138055) Escherichia coli UM146 12698651 YP_006109079.1 CDS UM146_00690 NC_017632.1 138045 138824 R COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; N-acetylgalactosamine-specific enzyme IIC component of PTS complement(138045..138824) Escherichia coli UM146 12698652 YP_006109080.1 CDS UM146_00695 NC_017632.1 138835 139308 R COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; N-acetylgalactosamine-specific PTS system transporter subunit IIB complement(138835..139308) Escherichia coli UM146 12698653 YP_006109081.1 CDS UM146_00700 NC_017632.1 139331 140611 R COG4573 Predicted tagatose 6-phosphate kinase; tagatose 6-phosphate aldolase 1, kbaZ subunit complement(139331..140611) Escherichia coli UM146 12698654 YP_006109082.1 CDS UM146_00705 NC_017632.1 140860 141684 D COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional regulator AgaR 140860..141684 Escherichia coli UM146 12698655 YP_006109083.1 CDS UM146_00710 NC_017632.1 141736 143307 R COG2721 Altronate dehydratase; (D)-galactarate dehydrogenase complement(141736..143307) Escherichia coli UM146 12698656 YP_006109084.1 CDS UM146_00715 NC_017632.1 143717 145015 D COG0477 Permeases of the major facilitator superfamily; putative (D)-galactarate transporter 143717..145015 Escherichia coli UM146 12698657 YP_006109085.1 CDS UM146_00720 NC_017632.1 145031 145801 D COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; alpha-dehydro-beta-deoxy-D-glucarate aldolase 145031..145801 Escherichia coli UM146 12698658 YP_006109086.1 CDS garR NC_017632.1 145831 146721 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; tartronate semialdehyde reductase 145831..146721 Escherichia coli UM146 12698659 YP_006109087.1 CDS UM146_00730 NC_017632.1 146818 147963 D COG1929 Glycerate kinase; glycerate kinase 146818..147963 Escherichia coli UM146 12698660 YP_006109088.1 CDS UM146_00735 NC_017632.1 148937 149293 R DNA-binding transcriptional activator TdcR complement(148937..149293) Escherichia coli UM146 12698661 YP_006109089.1 CDS UM146_00740 NC_017632.1 149471 150409 D COG0583 Transcriptional regulator; DNA-binding transcriptional activator TdcA 149471..150409 Escherichia coli UM146 12698662 YP_006109090.1 CDS UM146_00745 NC_017632.1 150508 151497 D COG1171 Threonine dehydratase; threonine dehydratase 150508..151497 Escherichia coli UM146 12698663 YP_006109091.1 CDS UM146_00750 NC_017632.1 151519 152850 D COG0814 Amino acid permeases; threonine/serine transporter TdcC 151519..152850 Escherichia coli UM146 12698664 YP_006109092.1 CDS UM146_00755 NC_017632.1 152876 154084 D COG0282 Acetate kinase; propionate/acetate kinase 152876..154084 Escherichia coli UM146 12698665 YP_006109093.1 CDS UM146_00760 NC_017632.1 154118 156412 D COG1882 Pyruvate-formate lyase; pyruvate formate-lyase 4/2-ketobutyrate formate-lyase 154118..156412 Escherichia coli UM146 12698666 YP_006109094.1 CDS UM146_00765 NC_017632.1 156426 156815 D COG0251 Putative translation initiation inhibitor, yjgF family; hypothetical protein 156426..156815 Escherichia coli UM146 12698667 YP_006109095.1 CDS UM146_00770 NC_017632.1 156887 158251 D COG1760 L-serine deaminase; L-serine dehydratase 3 156887..158251 Escherichia coli UM146 12698668 YP_006109096.1 CDS UM146_00775 NC_017632.1 158525 159856 D COG0814 Amino acid permeases; putative amino acid permease 158525..159856 Escherichia coli UM146 12698669 YP_006109097.1 CDS UM146_00780 NC_017632.1 159884 161194 D COG3681 Uncharacterized conserved protein; hypothetical protein 159884..161194 Escherichia coli UM146 12698670 YP_006109098.1 CDS UM146_00785 NC_017632.1 161326 161490 R hypothetical protein complement(161326..161490) Escherichia coli UM146 12698671 YP_006109099.1 CDS UM146_00790 NC_017632.1 161513 162214 R COG1741 Pirin-related protein; putative pirin-related protein complement(161513..162214) Escherichia coli UM146 12698672 YP_006109100.1 CDS UM146_00795 NC_017632.1 162319 163215 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 162319..163215 Escherichia coli UM146 12698673 YP_006109101.1 CDS UM146_00800 NC_017632.1 163249 163617 R COG3152 Predicted membrane protein; putative cytochrome complement(163249..163617) Escherichia coli UM146 12698674 YP_006109102.1 CDS UM146_00805 NC_017632.1 163900 164886 R COG0435 Predicted glutathione S-transferase; putative transferase complement(163900..164886) Escherichia coli UM146 12698675 YP_006109103.1 CDS UM146_00810 NC_017632.1 164956 165438 R COG2259 Predicted membrane protein; hypothetical protein complement(164956..165438) Escherichia coli UM146 12698676 YP_006109104.1 CDS UM146_00815 NC_017632.1 165535 165834 R hypothetical protein complement(165535..165834) Escherichia coli UM146 12698677 YP_006109105.1 CDS UM146_00820 NC_017632.1 165824 166228 R hypothetical protein complement(165824..166228) Escherichia coli UM146 12698678 YP_006109106.1 CDS UM146_00825 NC_017632.1 166231 166536 R COG4575 Uncharacterized conserved protein; hypothetical protein complement(166231..166536) Escherichia coli UM146 12698679 YP_006109107.1 CDS UM146_00830 NC_017632.1 166574 166942 R hypothetical protein complement(166574..166942) Escherichia coli UM146 12698680 YP_006109108.1 CDS UM146_00835 NC_017632.1 167089 167457 R hypothetical protein complement(167089..167457) Escherichia coli UM146 12698681 YP_006109109.1 CDS UM146_00840 NC_017632.1 167476 168138 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(167476..168138) Escherichia coli UM146 12698682 YP_006109110.1 CDS UM146_00845 NC_017632.1 168483 169259 R COG2186 Transcriptional regulators; DNA-binding transcriptional repressor ExuR complement(168483..169259) Escherichia coli UM146 12698683 YP_006109111.1 CDS UM146_00850 NC_017632.1 169389 170687 R COG0477 Permeases of the major facilitator superfamily; hexuronate transporter complement(169389..170687) Escherichia coli UM146 12698684 YP_006109112.1 CDS UM146_00855 NC_017632.1 171169 172581 D COG1904 Glucuronate isomerase; glucuronate isomerase 171169..172581 Escherichia coli UM146 12698685 YP_006109113.1 CDS UM146_00860 NC_017632.1 172596 174083 D COG2721 Altronate dehydratase; altronate hydrolase 172596..174083 Escherichia coli UM146 12698686 YP_006109114.1 CDS UM146_00865 NC_017632.1 174166 174717 D hypothetical protein 174166..174717 Escherichia coli UM146 12698687 YP_006109115.1 CDS UM146_00870 NC_017632.1 174721 175965 R COG3633 Na+/serine symporter; serine/threonine transporter SstT complement(174721..175965) Escherichia coli UM146 12698688 YP_006109116.1 CDS UM146_00875 NC_017632.1 176289 177254 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(176289..177254) Escherichia coli UM146 12698689 YP_006109117.1 CDS UM146_00880 NC_017632.1 177536 178540 R COG0673 Predicted dehydrogenases and related proteins; putative NAD(P)-binding dehydrogenase complement(177536..178540) Escherichia coli UM146 12698690 YP_006109118.1 CDS UM146_00885 NC_017632.1 178601 179293 R COG2949 Uncharacterized membrane protein; putative thioredoxin-like protein complement(178601..179293) Escherichia coli UM146 12698691 YP_006109119.1 CDS UM146_00890 NC_017632.1 179370 179873 R COG1451 Predicted metal-dependent hydrolase; hypothetical protein complement(179370..179873) Escherichia coli UM146 12698692 YP_006109120.1 CDS UM146_00895 NC_017632.1 179958 181094 D COG2813 16S RNA G1207 methylase RsmC; putative methyltransferase small domain-containing protein 179958..181094 Escherichia coli UM146 12698693 YP_006109121.1 CDS UM146_00900 NC_017632.1 181212 183230 R COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; 2,4-dienoyl-CoA reductase complement(181212..183230) Escherichia coli UM146 12698694 YP_006109122.1 CDS UM146_00905 NC_017632.1 183401 185752 R COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; putative glycosyl hydrolase complement(183401..185752) Escherichia coli UM146 12698695 YP_006109123.1 CDS UM146_00910 NC_017632.1 185769 186839 R hypothetical protein complement(185769..186839) Escherichia coli UM146 12698696 YP_006109124.1 CDS UM146_00915 NC_017632.1 186973 188406 R COG0531 Amino acid transporters; putative transporter complement(186973..188406) Escherichia coli UM146 12698697 YP_006109125.1 CDS ebgC NC_017632.1 188469 188918 R COG2731 Beta-galactosidase, beta subunit; cryptic beta-D-galactosidase subunit beta complement(188469..188918) Escherichia coli UM146 12698698 YP_006109126.1 CDS ebgA NC_017632.1 188915 192007 R COG3250 Beta-galactosidase/beta-glucuronidase; cryptic beta-D-galactosidase subunit alpha complement(188915..192007) Escherichia coli UM146 12698699 YP_006109127.1 CDS UM146_00930 NC_017632.1 192191 193174 R COG1609 Transcriptional regulators; DNA-binding transcriptional repressor EbgR complement(192191..193174) Escherichia coli UM146 12698700 YP_006109128.1 CDS UM146_00935 NC_017632.1 193393 193725 D COG0073 EMAP domain; hypothetical protein 193393..193725 Escherichia coli UM146 12698701 YP_006109129.1 CDS UM146_00940 NC_017632.1 193767 195173 R COG4992 Ornithine/acetylornithine aminotransferase; putrescine--2-oxoglutarate aminotransferase complement(193767..195173) Escherichia coli UM146 12698702 YP_006109130.1 CDS UM146_00945 NC_017632.1 195564 197084 D COG2202 FOG: PAS/PAC domain; aerotaxis sensor receptor, flavoprotein 195564..197084 Escherichia coli UM146 12698703 YP_006109131.1 CDS UM146_00950 NC_017632.1 197276 197860 R COG1695 Predicted transcriptional regulators; putative transcriptional regulator complement(197276..197860) Escherichia coli UM146 12698704 YP_006109132.1 CDS UM146_00955 NC_017632.1 198137 198901 D COG2375 Siderophore-interacting protein; siderophore-interacting protein 198137..198901 Escherichia coli UM146 12698705 YP_006109133.1 CDS UM146_00960 NC_017632.1 199155 199661 D COG3663 G:T/U mismatch-specific DNA glycosylase; G/U mismatch-specific DNA glycosylase 199155..199661 Escherichia coli UM146 12698707 YP_006109134.1 CDS UM146_00965 NC_017632.1 199740 201581 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD complement(199740..201581) Escherichia coli UM146 12698708 YP_006109135.1 CDS dnaG NC_017632.1 201776 203521 R COG0358 DNA primase (bacterial type); DNA primase complement(201776..203521) Escherichia coli UM146 12698709 YP_006109136.1 CDS rpsU NC_017632.1 203632 203847 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(203632..203847) Escherichia coli UM146 12698710 YP_006109137.1 CDS UM146_00980 NC_017632.1 204085 205098 D COG0533 Metal-dependent proteases with possible chaperone activity; putative DNA-binding/iron metalloprotein/AP endonuclease 204085..205098 Escherichia coli UM146 12698711 YP_006109138.1 CDS UM146_00985 NC_017632.1 205141 206604 R COG0471 Di- and tricarboxylate transporters; putative tartrate:succinate antiporter complement(205141..206604) Escherichia coli UM146 12698712 YP_006109139.1 CDS UM146_00990 NC_017632.1 206652 207257 R COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain; L(+)-tartrate dehydratase subunit beta complement(206652..207257) Escherichia coli UM146 12698713 YP_006109140.1 CDS UM146_00995 NC_017632.1 207254 208165 R COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; tartrate dehydratase subunit alpha complement(207254..208165) Escherichia coli UM146 12698714 YP_006109141.1 CDS UM146_01000 NC_017632.1 208372 209304 D COG0583 Transcriptional regulator; transcriptional activator TtdR 208372..209304 Escherichia coli UM146 12698715 YP_006109142.1 CDS UM146_01005 NC_017632.1 209317 209934 R COG0344 Predicted membrane protein; putative glycerol-3-phosphate acyltransferase PlsY complement(209317..209934) Escherichia coli UM146 12698716 YP_006109143.1 CDS folB NC_017632.1 210039 210407 D COG1539 Dihydroneopterin aldolase; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 210039..210407 Escherichia coli UM146 12698717 YP_006109144.1 CDS UM146_01015 NC_017632.1 210498 211319 D COG1968 Uncharacterized bacitracin resistance protein; undecaprenyl pyrophosphate phosphatase 210498..211319 Escherichia coli UM146 12698718 YP_006109145.1 CDS cca NC_017632.1 211507 212745 R COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase complement(211507..212745) Escherichia coli UM146 12698719 YP_006109146.1 CDS UM146_01025 NC_017632.1 212809 213429 R COG3103 SH3 domain protein; putative signal transduction protein complement(212809..213429) Escherichia coli UM146 12698720 YP_006109147.1 CDS UM146_01030 NC_017632.1 213671 214972 D COG3025 Uncharacterized conserved protein; adenylate cyclase 213671..214972 Escherichia coli UM146 12698721 YP_006109148.1 CDS UM146_01035 NC_017632.1 214995 217835 D COG1391 Glutamine synthetase adenylyltransferase; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 214995..217835 Escherichia coli UM146 12698722 YP_006109149.1 CDS UM146_01040 NC_017632.1 217883 219316 D COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 217883..219316 Escherichia coli UM146 12698723 YP_006109150.1 CDS UM146_01045 NC_017632.1 219735 221396 R COG2268 Uncharacterized protein conserved in bacteria; hypothetical protein complement(219735..221396) Escherichia coli UM146 12698724 YP_006109151.1 CDS UM146_01050 NC_017632.1 221423 222052 R inner membrane protein complement(221423..222052) Escherichia coli UM146 12698725 YP_006109152.1 CDS UM146_01055 NC_017632.1 222321 222521 D glycogen synthesis protein GlgS 222321..222521 Escherichia coli UM146 12698726 YP_006109153.1 CDS UM146_01060 NC_017632.1 222556 222855 R COG2960 Uncharacterized protein conserved in bacteria; hypothetical protein complement(222556..222855) Escherichia coli UM146 12698727 YP_006109154.1 CDS ribB NC_017632.1 223229 223882 D COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 223229..223882 Escherichia coli UM146 12698728 YP_006109155.1 CDS UM146_01070 NC_017632.1 223936 224985 R putative fimbrial adhesin complement(223936..224985) Escherichia coli UM146 12698729 YP_006109156.1 CDS UM146_01075 NC_017632.1 224982 225731 R COG3121 P pilus assembly protein, chaperone PapD; putative periplasmic pilin chaperone complement(224982..225731) Escherichia coli UM146 12698730 YP_006109157.1 CDS UM146_01080 NC_017632.1 225738 228260 R COG3188 P pilus assembly protein, porin PapC; putative outer membrane usher protein complement(225738..228260) Escherichia coli UM146 12698731 YP_006109158.1 CDS UM146_01085 NC_017632.1 228347 228979 R COG3539 P pilus assembly protein, pilin FimA; putative fimbrial protein complement(228347..228979) Escherichia coli UM146 12698732 YP_006109159.1 CDS UM146_01090 NC_017632.1 229481 229651 D hypothetical protein 229481..229651 Escherichia coli UM146 12698733 YP_006109160.1 CDS UM146_01095 NC_017632.1 229713 230486 R COG0428 Predicted divalent heavy-metal cations transporter; zinc transporter ZupT complement(229713..230486) Escherichia coli UM146 12698734 YP_006109161.1 CDS UM146_01100 NC_017632.1 230629 231417 D COG3384 Uncharacterized conserved protein; hypothetical protein 230629..231417 Escherichia coli UM146 12698735 YP_006109162.1 CDS UM146_01105 NC_017632.1 231463 232134 R COG1495 Disulfide bond formation protein DsbB; putative disulfide oxidoreductase complement(231463..232134) Escherichia coli UM146 12698736 YP_006109163.1 CDS UM146_01110 NC_017632.1 232149 232817 R COG0526 Thiol-disulfide isomerase and thioredoxins; Thiol:disulfide interchange protein dsbA precursor complement(232149..232817) Escherichia coli UM146 12698737 YP_006109164.1 CDS UM146_01115 NC_017632.1 232835 234631 R arylsulfate sulfotransferase complement(232835..234631) Escherichia coli UM146 12698738 YP_006109165.1 CDS UM146_01120 NC_017632.1 235116 236276 R COG0754 Glutathionylspermidine synthase; hypothetical protein complement(235116..236276) Escherichia coli UM146 12698739 YP_006109166.1 CDS UM146_01125 NC_017632.1 236282 236953 R COG5463 Predicted integral membrane protein; hypothetical protein complement(236282..236953) Escherichia coli UM146 12698740 YP_006109167.1 CDS tolC NC_017632.1 237101 238582 R COG1538 Outer membrane protein; outer membrane channel protein complement(237101..238582) Escherichia coli UM146 12698741 YP_006109168.1 CDS nudF NC_017632.1 238787 239416 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; ADP-ribose pyrophosphatase NudF 238787..239416 Escherichia coli UM146 12698742 YP_006109169.1 CDS UM146_01140 NC_017632.1 239417 239839 D COG3151 Uncharacterized protein conserved in bacteria; hypothetical protein 239417..239839 Escherichia coli UM146 12698743 YP_006109170.1 CDS UM146_01145 NC_017632.1 239864 240691 D COG1409 Predicted phosphohydrolases; cyclic 3',5'-adenosine monophosphate phosphodiesterase 239864..240691 Escherichia coli UM146 12698744 YP_006109171.1 CDS UM146_01150 NC_017632.1 240691 241272 D COG3150 Predicted esterase; esterase YqiA 240691..241272 Escherichia coli UM146 12698745 YP_006109172.1 CDS UM146_01155 NC_017632.1 241301 243193 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA topoisomerase IV subunit B 241301..243193 Escherichia coli UM146 12698746 YP_006109173.1 CDS UM146_01160 NC_017632.1 243257 245398 R COG1629 Outer membrane receptor proteins, mostly Fe transport; putative iron compound receptor complement(243257..245398) Escherichia coli UM146 12698747 YP_006109174.1 CDS UM146_01165 NC_017632.1 245772 246581 D COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; ferric enterobactin transport ATP-binding protein (fepC-like) 245772..246581 Escherichia coli UM146 12698748 YP_006109175.1 CDS UM146_01170 NC_017632.1 246578 247561 D COG0609 ABC-type Fe3+-siderophore transport system, permease component; putative iron compound permease protein of ABC transporter family 246578..247561 Escherichia coli UM146 12698749 YP_006109176.1 CDS UM146_01175 NC_017632.1 247558 248607 D COG4779 ABC-type enterobactin transport system, permease component; putative iron compound permease protein of ABC transporter family 247558..248607 Escherichia coli UM146 12698750 YP_006109177.1 CDS UM146_01180 NC_017632.1 248618 249565 D COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; ferrichrome-binding protein 248618..249565 Escherichia coli UM146 12698751 YP_006109178.1 CDS UM146_01185 NC_017632.1 249562 250449 D COG1737 Transcriptional regulators; putative bifunctional protein: transcriptional regulator and sugar phosphate isomerase 249562..250449 Escherichia coli UM146 12698752 YP_006109179.1 CDS UM146_01190 NC_017632.1 250494 250808 R COG1359 Uncharacterized conserved protein; quinol monooxygenase complement(250494..250808) Escherichia coli UM146 12698753 YP_006109180.1 CDS UM146_01195 NC_017632.1 250839 251420 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); Modulator of drug activity B complement(250839..251420) Escherichia coli UM146 12698754 YP_006109181.1 CDS UM146_01200 NC_017632.1 251670 252149 D COG3157 Hemolysin-coregulated protein (uncharacterized); hypothetical protein 251670..252149 Escherichia coli UM146 12698755 YP_006109182.1 CDS UM146_01205 NC_017632.1 252152 252862 D hypothetical protein 252152..252862 Escherichia coli UM146 12698756 YP_006109183.1 CDS UM146_01210 NC_017632.1 252869 253201 D hypothetical protein 252869..253201 Escherichia coli UM146 12698757 YP_006109184.1 CDS UM146_01215 NC_017632.1 253247 254596 R COG0642 Signal transduction histidine kinase; sensor protein QseC complement(253247..254596) Escherichia coli UM146 12698758 YP_006109185.1 CDS UM146_01220 NC_017632.1 254593 255252 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator QseB complement(254593..255252) Escherichia coli UM146 12698759 YP_006109186.1 CDS UM146_01225 NC_017632.1 255237 255404 R hypothetical protein complement(255237..255404) Escherichia coli UM146 12698760 YP_006109187.1 CDS UM146_01230 NC_017632.1 255403 255795 D COG3111 Uncharacterized conserved protein; Protein ygiW 255403..255795 Escherichia coli UM146 12698761 YP_006109188.1 CDS UM146_01235 NC_017632.1 255848 256330 D COG3449 DNA gyrase inhibitor; putative transcriptional regulator 255848..256330 Escherichia coli UM146 12698762 YP_006109189.1 CDS UM146_01240 NC_017632.1 256439 258046 D COG4166 ABC-type oligopeptide transport system, periplasmic component; putative binding protein 256439..258046 Escherichia coli UM146 12698763 YP_006109190.1 CDS UM146_01245 NC_017632.1 258184 260442 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA topoisomerase IV subunit A 258184..260442 Escherichia coli UM146 12698764 YP_006109191.1 CDS UM146_01250 NC_017632.1 260677 261414 D COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 260677..261414 Escherichia coli UM146 12698765 YP_006109192.1 CDS UM146_01255 NC_017632.1 261489 262901 D COG2132 Putative multicopper oxidases; repressor protein for FtsI 261489..262901 Escherichia coli UM146 12698766 YP_006109193.1 CDS UM146_01260 NC_017632.1 262972 264276 R COG1593 TRAP-type C4-dicarboxylate transport system, large permease component; c4-dicarboxylate permease complement(262972..264276) Escherichia coli UM146 12698767 YP_006109194.1 CDS UM146_01265 NC_017632.1 264287 264769 R COG3090 TRAP-type C4-dicarboxylate transport system, small permease component; hypothetical protein complement(264287..264769) Escherichia coli UM146 12698768 YP_006109195.1 CDS UM146_01270 NC_017632.1 264811 265794 R COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component; putative c4-dicarboxylate transport system binding protein; putative secreted protein complement(264811..265794) Escherichia coli UM146 12698769 YP_006109196.1 CDS UM146_01275 NC_017632.1 265867 266877 R COG2055 Malate/L-lactate dehydrogenases; Ureidoglycolate dehydrogenase complement(265867..266877) Escherichia coli UM146 12698770 YP_006109197.1 CDS UM146_01280 NC_017632.1 266888 267904 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative L-threonine 3-dehydrogenase complement(266888..267904) Escherichia coli UM146 12698771 YP_006109198.1 CDS UM146_01285 NC_017632.1 267901 269373 R COG0246 Mannitol-1-phosphate/altronate dehydrogenases; putative Fructuronate reductase complement(267901..269373) Escherichia coli UM146 12698772 YP_006109199.1 CDS UM146_01290 NC_017632.1 269696 270445 R COG2186 Transcriptional regulators; putative regulator complement(269696..270445) Escherichia coli UM146 12698773 YP_006109200.1 CDS UM146_01295 NC_017632.1 270697 272916 D COG1032 Fe-S oxidoreductase; hypothetical protein 270697..272916 Escherichia coli UM146 12698774 YP_006109201.1 CDS UM146_01300 NC_017632.1 272958 273215 R putative outer membrane lipoprotein complement(272958..273215) Escherichia coli UM146 12698775 YP_006109202.1 CDS UM146_01305 NC_017632.1 273266 274192 R hypothetical protein complement(273266..274192) Escherichia coli UM146 12698776 YP_006109203.1 CDS dkgA NC_017632.1 274392 275219 R COG0656 Aldo/keto reductases, related to diketogulonate reductase; 2,5-diketo-D-gluconate reductase A complement(274392..275219) Escherichia coli UM146 12698777 YP_006109204.1 CDS UM146_01315 NC_017632.1 275324 276487 R COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family; alcohol dehydrogenase complement(275324..276487) Escherichia coli UM146 12698778 YP_006109205.1 CDS UM146_01320 NC_017632.1 276624 277580 D COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator, ARAC-type 276624..277580 Escherichia coli UM146 12698779 YP_006109206.1 CDS UM146_01325 NC_017632.1 277620 278279 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(277620..278279) Escherichia coli UM146 12698780 YP_006109207.1 CDS UM146_01330 NC_017632.1 278419 279606 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine beta-lyase complement(278419..279606) Escherichia coli UM146 12698781 YP_006109208.1 CDS UM146_01335 NC_017632.1 279858 280592 D COG0811 Biopolymer transport proteins; biopolymer transport protein ExbB 279858..280592 Escherichia coli UM146 12698782 YP_006109209.1 CDS UM146_01340 NC_017632.1 280599 281024 D COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 280599..281024 Escherichia coli UM146 12698783 YP_006109210.1 CDS UM146_01345 NC_017632.1 281063 281947 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase complement(281063..281947) Escherichia coli UM146 12698784 YP_006109211.1 CDS UM146_01350 NC_017632.1 282138 282632 D COG2862 Predicted membrane protein; hypothetical protein 282138..282632 Escherichia coli UM146 12698785 YP_006109212.1 CDS UM146_01355 NC_017632.1 282672 283712 R COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); aldo-keto reductase complement(282672..283712) Escherichia coli UM146 12698786 YP_006109213.1 CDS UM146_01360 NC_017632.1 283869 284756 D COG0412 Dienelactone hydrolase and related enzymes; hypothetical protein 283869..284756 Escherichia coli UM146 12698787 YP_006109214.1 CDS UM146_01365 NC_017632.1 284875 285162 D hypothetical protein 284875..285162 Escherichia coli UM146 12698788 YP_006109215.1 CDS UM146_01370 NC_017632.1 285351 286469 D COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase 2 small subunit 285351..286469 Escherichia coli UM146 12698789 YP_006109216.1 CDS UM146_01375 NC_017632.1 286472 287458 D COG0437 Fe-S-cluster-containing hydrogenase components 1; hydrogenase 2 protein HybA 286472..287458 Escherichia coli UM146 12698790 YP_006109217.1 CDS UM146_01380 NC_017632.1 287448 288626 D COG5557 Polysulphide reductase; putative hydrogenase 2 b cytochrome subunit 287448..288626 Escherichia coli UM146 12698791 YP_006109218.1 CDS UM146_01385 NC_017632.1 288623 290326 D COG0374 Ni,Fe-hydrogenase I large subunit; hydrogenase 2 large subunit 288623..290326 Escherichia coli UM146 12698792 YP_006109219.1 CDS hybD NC_017632.1 290326 290820 D COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 2 maturation endopeptidase 290326..290820 Escherichia coli UM146 12698793 YP_006109220.1 CDS UM146_01395 NC_017632.1 290813 291301 D hydrogenase 2-specific chaperone 290813..291301 Escherichia coli UM146 12698794 YP_006109221.1 CDS UM146_01400 NC_017632.1 291294 291635 D COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein HybF 291294..291635 Escherichia coli UM146 12698795 YP_006109222.1 CDS UM146_01405 NC_017632.1 291648 291896 D COG0298 Hydrogenase maturation factor; hydrogenase 2 accessory protein HypG 291648..291896 Escherichia coli UM146 12698796 YP_006109223.1 CDS UM146_01410 NC_017632.1 292029 292895 R COG0625 Glutathione S-transferase; putative glutathione S-transferase YghU complement(292029..292895) Escherichia coli UM146 12698797 YP_006109224.1 CDS UM146_01415 NC_017632.1 293100 294959 D COG0754 Glutathionylspermidine synthase; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 293100..294959 Escherichia coli UM146 12698798 YP_006109225.1 CDS UM146_01420 NC_017632.1 295251 296750 D COG0306 Phosphate/sulphate permeases; phosphate transporter 295251..296750 Escherichia coli UM146 12698799 YP_006109226.1 CDS UM146_01425 NC_017632.1 296799 297491 R COG0125 Thymidylate kinase; hypothetical protein complement(296799..297491) Escherichia coli UM146 12698800 YP_006109227.1 CDS UM146_01430 NC_017632.1 297681 298379 D COG0125 Thymidylate kinase; hypothetical protein 297681..298379 Escherichia coli UM146 12698801 YP_006109228.1 CDS UM146_01435 NC_017632.1 298411 299169 D COG0125 Thymidylate kinase; hypothetical protein 298411..299169 Escherichia coli UM146 12698802 YP_006109229.1 CDS UM146_01440 NC_017632.1 299215 300564 D COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; hypothetical protein 299215..300564 Escherichia coli UM146 12698803 YP_006109230.1 CDS UM146_01445 NC_017632.1 300564 301400 D hypothetical protein 300564..301400 Escherichia coli UM146 12698804 YP_006109231.1 CDS UM146_01450 NC_017632.1 301400 301960 D COG3054 Predicted transcriptional regulator; Putative transcriptional regulator 301400..301960 Escherichia coli UM146 12698805 YP_006109232.1 CDS UM146_01455 NC_017632.1 301991 303061 D COG0795 Predicted permeases; hypothetical protein 301991..303061 Escherichia coli UM146 12698806 YP_006109233.1 CDS UM146_01460 NC_017632.1 303058 304137 D COG0795 Predicted permeases; hypothetical protein 303058..304137 Escherichia coli UM146 12698807 YP_006109234.1 CDS UM146_01465 NC_017632.1 304172 304960 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; Putative 8-amino-7-oxononanoate synthase complement(304172..304960) Escherichia coli UM146 12698808 YP_006109235.1 CDS UM146_01470 NC_017632.1 304993 305343 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; putative class II aminotransferase complement(304993..305343) Escherichia coli UM146 12698809 YP_006109236.1 CDS UM146_01475 NC_017632.1 305343 305591 R COG0236 Acyl carrier protein; hypothetical protein complement(305343..305591) Escherichia coli UM146 12698810 YP_006109237.1 CDS UM146_01480 NC_017632.1 305623 306537 R COG0702 Predicted nucleoside-diphosphate-sugar epimerases; putative epimerase complement(305623..306537) Escherichia coli UM146 12698811 YP_006109238.1 CDS UM146_01485 NC_017632.1 306534 308225 R COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; acyl-CoA synthetase complement(306534..308225) Escherichia coli UM146 12698812 YP_006109239.1 CDS UM146_01490 NC_017632.1 308629 309771 D putative DNA-binding transcriptional regulator 308629..309771 Escherichia coli UM146 12698813 YP_006109240.1 CDS UM146_01495 NC_017632.1 309778 310542 R COG2186 Transcriptional regulators; DNA-binding transcriptional regulator GlcC complement(309778..310542) Escherichia coli UM146 12698814 YP_006109241.1 CDS UM146_01500 NC_017632.1 310793 312292 D COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase subunit GlcD 310793..312292 Escherichia coli UM146 12698815 YP_006109242.1 CDS glcE NC_017632.1 312292 313344 D COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase FAD binding subunit 312292..313344 Escherichia coli UM146 12698816 YP_006109243.1 CDS glcF NC_017632.1 313355 314578 D COG0247 Fe-S oxidoreductase; glycolate oxidase iron-sulfur subunit 313355..314578 Escherichia coli UM146 12698817 YP_006109244.1 CDS UM146_01515 NC_017632.1 314583 314987 D COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol; hypothetical protein 314583..314987 Escherichia coli UM146 12698818 YP_006109245.1 CDS UM146_01520 NC_017632.1 315009 317180 D COG2225 Malate synthase; malate synthase G 315009..317180 Escherichia coli UM146 12698819 YP_006109246.1 CDS UM146_01525 NC_017632.1 317536 319218 D COG1620 L-lactate permease; glycolate transporter 317536..319218 Escherichia coli UM146 12698820 YP_006109247.1 CDS UM146_01530 NC_017632.1 319834 324264 D putative lipoprotein AcfD-like precursor 319834..324264 Escherichia coli UM146 12698821 YP_006109248.1 CDS UM146_01535 NC_017632.1 324428 325237 D COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; bifunctional prepilin leader peptidase and methylase 324428..325237 Escherichia coli UM146 12698822 YP_006109249.1 CDS UM146_01540 NC_017632.1 325303 325713 D hypothetical protein 325303..325713 Escherichia coli UM146 12698823 YP_006109250.1 CDS UM146_01545 NC_017632.1 325731 326690 D COG3031 Type II secretory pathway, component PulC; putative type II secretion protein GspC 325731..326690 Escherichia coli UM146 12698824 YP_006109251.1 CDS UM146_01550 NC_017632.1 326720 328780 D COG1450 Type II secretory pathway, component PulD; general secretion pathway protein D 326720..328780 Escherichia coli UM146 12698825 YP_006109252.1 CDS UM146_01555 NC_017632.1 328780 330273 D COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; general secretion pathway protein E 328780..330273 Escherichia coli UM146 12698826 YP_006109253.1 CDS UM146_01560 NC_017632.1 330273 331496 D COG1459 Type II secretory pathway, component PulF; General secretion pathway protein F 330273..331496 Escherichia coli UM146 12698827 YP_006109254.1 CDS UM146_01565 NC_017632.1 331513 331968 D COG2165 Type II secretory pathway, pseudopilin PulG; putative general secretion pathway protein G precursor (epsG-like) 331513..331968 Escherichia coli UM146 12698828 YP_006109255.1 CDS UM146_01570 NC_017632.1 331972 332535 D COG2165 Type II secretory pathway, pseudopilin PulG; hypothetical protein 331972..332535 Escherichia coli UM146 12698829 YP_006109256.1 CDS UM146_01575 NC_017632.1 332532 332903 D COG2165 Type II secretory pathway, pseudopilin PulG; putative type II secretion protein (GspI-like) 332532..332903 Escherichia coli UM146 12698830 YP_006109257.1 CDS UM146_01580 NC_017632.1 332936 333505 D COG4795 Type II secretory pathway, component PulJ; hypothetical protein 332936..333505 Escherichia coli UM146 12698831 YP_006109258.1 CDS UM146_01585 NC_017632.1 333502 334479 D COG3156 Type II secretory pathway, component PulK; putative type II secretion protein 333502..334479 Escherichia coli UM146 12698832 YP_006109259.1 CDS UM146_01590 NC_017632.1 334476 335654 D COG3297 Type II secretory pathway, component PulL; GspL-like protein 334476..335654 Escherichia coli UM146 12698833 YP_006109260.1 CDS UM146_01595 NC_017632.1 335656 336192 D COG3149 Type II secretory pathway, component PulM; putative general secretion pathway protein YghD 335656..336192 Escherichia coli UM146 12698834 YP_006109261.1 CDS UM146_01600 NC_017632.1 337250 338026 D COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; Polysialic acid transport protein 337250..338026 Escherichia coli UM146 12698835 YP_006109262.1 CDS UM146_01605 NC_017632.1 338023 338682 D COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; Polysialic acid transport ATP-binding protein 338023..338682 Escherichia coli UM146 12698836 YP_006109263.1 CDS UM146_01610 NC_017632.1 338732 339355 D COG0110 Acetyltransferase (isoleucine patch superfamily); NeuD protein involved in sialic acid synthesis 338732..339355 Escherichia coli UM146 12698837 YP_006109264.1 CDS UM146_01625 NC_017632.1 340391 341647 D COG1083 CMP-N-acetylneuraminic acid synthetase; N-acylneuraminate cytidylyltransferase 340391..341647 Escherichia coli UM146 12698838 YP_006109265.1 CDS UM146_01630 NC_017632.1 341644 342819 D COG0381 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 341644..342819 Escherichia coli UM146 12698839 YP_006109266.1 CDS UM146_01635 NC_017632.1 342812 343903 D polysialic acid biosynthesis protein 342812..343903 Escherichia coli UM146 12698840 YP_006109267.1 CDS UM146_01640 NC_017632.1 343949 345178 D Poly-alpha-2,8 sialosyl sialyltransferase 343949..345178 Escherichia coli UM146 12698841 YP_006109268.1 CDS UM146_01645 NC_017632.1 345328 346533 R COG3562 Capsule polysaccharide export protein; capsule polysaccharide biosynthesis protein complement(345328..346533) Escherichia coli UM146 12698842 YP_006109269.1 CDS UM146_01650 NC_017632.1 346568 348595 R COG3563 Capsule polysaccharide export protein; Capsule polysaccharide export protein complement(346568..348595) Escherichia coli UM146 12698843 YP_006109270.1 CDS UM146_01655 NC_017632.1 348592 349332 R COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(348592..349332) Escherichia coli UM146 12698844 YP_006109271.1 CDS UM146_01660 NC_017632.1 349342 351018 R COG1596 Periplasmic protein involved in polysaccharide export; Polysialic acid transport protein precursor complement(349342..351018) Escherichia coli UM146 12698845 YP_006109272.1 CDS UM146_01665 NC_017632.1 351042 352190 R COG3524 Capsule polysaccharide export protein; Capsule polysaccharide export inner-membrane protein kpsE complement(351042..352190) Escherichia coli UM146 12698846 YP_006109273.1 CDS UM146_01670 NC_017632.1 352262 353281 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Polysialic acid capsule expression protein complement(352262..353281) Escherichia coli UM146 12698847 YP_006109274.1 CDS UM146_01675 NC_017632.1 354055 354210 R COG3547 Transposase and inactivated derivatives; hypothetical protein complement(354055..354210) Escherichia coli UM146 12698848 YP_006109275.1 CDS UM146_01680 NC_017632.1 354616 355323 R COG1811 Uncharacterized membrane protein, possible Na+ channel or pump; hypothetical protein complement(354616..355323) Escherichia coli UM146 12698850 YP_006109276.1 CDS UM146_01685 NC_017632.1 355722 357857 D COG1982 Arginine/lysine/ornithine decarboxylases; ornithine decarboxylase 355722..357857 Escherichia coli UM146 12698851 YP_006109277.1 CDS UM146_01690 NC_017632.1 357906 359162 R COG0477 Permeases of the major facilitator superfamily; transport of nucleosides, permease protein complement(357906..359162) Escherichia coli UM146 12698852 YP_006109278.1 CDS mltC NC_017632.1 359364 360443 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); murein transglycosylase C complement(359364..360443) Escherichia coli UM146 12698853 YP_006109279.1 CDS UM146_01700 NC_017632.1 360508 360783 R COG2924 Fe-S cluster protector protein; hypothetical protein complement(360508..360783) Escherichia coli UM146 12698854 YP_006109280.1 CDS UM146_01705 NC_017632.1 360811 361863 R COG1194 A/G-specific DNA glycosylase; adenine DNA glycosylase complement(360811..361863) Escherichia coli UM146 12698855 YP_006109281.1 CDS trmB NC_017632.1 362024 362743 D COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 362024..362743 Escherichia coli UM146 12698856 YP_006109282.1 CDS UM146_01715 NC_017632.1 362743 363069 D COG3171 Uncharacterized protein conserved in bacteria; hypothetical protein 362743..363069 Escherichia coli UM146 12698857 YP_006109283.1 CDS UM146_01720 NC_017632.1 363092 363232 D hypothetical protein 363092..363232 Escherichia coli UM146 12698858 YP_006109284.1 CDS UM146_01725 NC_017632.1 363256 363972 D hypothetical protein 363256..363972 Escherichia coli UM146 12698859 YP_006109285.1 CDS ansB NC_017632.1 364148 365194 D COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase II 364148..365194 Escherichia coli UM146 12698860 YP_006109286.1 CDS UM146_01735 NC_017632.1 365311 366318 D hypothetical protein 365311..366318 Escherichia coli UM146 12698861 YP_006109287.1 CDS UM146_01740 NC_017632.1 366387 367523 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(366387..367523) Escherichia coli UM146 12698862 YP_006109288.1 CDS UM146_01745 NC_017632.1 367516 368109 R COG0127 Xanthosine triphosphate pyrophosphatase; putative deoxyribonucleotide triphosphate pyrophosphatase complement(367516..368109) Escherichia coli UM146 12698863 YP_006109289.1 CDS UM146_01750 NC_017632.1 368117 368407 R COG1872 Uncharacterized conserved protein; hypothetical protein complement(368117..368407) Escherichia coli UM146 12698864 YP_006109290.1 CDS UM146_01755 NC_017632.1 368404 368970 R COG0762 Predicted integral membrane protein; hypothetical protein complement(368404..368970) Escherichia coli UM146 12698865 YP_006109291.1 CDS UM146_01760 NC_017632.1 368988 369692 R COG0325 Predicted enzyme with a TIM-barrel fold; hypothetical protein complement(368988..369692) Escherichia coli UM146 12698866 YP_006109292.1 CDS UM146_01765 NC_017632.1 369710 370690 D COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT; transporter 369710..370690 Escherichia coli UM146 12698867 YP_006109293.1 CDS UM146_01770 NC_017632.1 370864 371280 R COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein complement(370864..371280) Escherichia coli UM146 12698868 YP_006109294.1 CDS UM146_01775 NC_017632.1 371280 371843 R COG1678 Putative transcriptional regulator; hypothetical protein complement(371280..371843) Escherichia coli UM146 12698869 YP_006109295.1 CDS UM146_01780 NC_017632.1 371952 372902 R COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); glutathione synthetase complement(371952..372902) Escherichia coli UM146 12698870 YP_006109296.1 CDS UM146_01785 NC_017632.1 372915 373646 R COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE complement(372915..373646) Escherichia coli UM146 12698871 YP_006109297.1 CDS UM146_01790 NC_017632.1 373726 374433 R COG2356 Endonuclease I; endonuclease I complement(373726..374433) Escherichia coli UM146 12698872 YP_006109298.1 CDS UM146_01795 NC_017632.1 374528 375025 R COG3091 Uncharacterized protein conserved in bacteria; hypothetical protein complement(374528..375025) Escherichia coli UM146 12698873 YP_006109299.1 CDS UM146_01800 NC_017632.1 375102 376457 R COG0477 Permeases of the major facilitator superfamily; D-galactose transporter complement(375102..376457) Escherichia coli UM146 12698874 YP_006109300.1 CDS UM146_01805 NC_017632.1 376933 378087 R COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase complement(376933..378087) Escherichia coli UM146 12698875 YP_006109301.1 CDS UM146_01810 NC_017632.1 378143 378394 D hypothetical protein 378143..378394 Escherichia coli UM146 12698876 YP_006109302.1 CDS UM146_01815 NC_017632.1 378742 378873 D hypothetical protein 378742..378873 Escherichia coli UM146 12698877 YP_006109303.1 CDS UM146_01820 NC_017632.1 378960 380858 D COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase 378960..380858 Escherichia coli UM146 12698878 YP_006109304.1 CDS UM146_01825 NC_017632.1 381004 381735 D hypothetical protein 381004..381735 Escherichia coli UM146 12698879 YP_006109305.1 CDS UM146_01830 NC_017632.1 381871 382791 D COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; agmatinase 381871..382791 Escherichia coli UM146 12698880 YP_006109306.1 CDS UM146_01835 NC_017632.1 382995 383753 R COG0501 Zn-dependent protease with chaperone function; putative peptidase complement(382995..383753) Escherichia coli UM146 12698881 YP_006109307.1 CDS UM146_01840 NC_017632.1 384031 386022 D COG0021 Transketolase; transketolase 384031..386022 Escherichia coli UM146 12698882 YP_006109308.1 CDS UM146_01845 NC_017632.1 386242 387150 R COG0330 Membrane protease subunits, stomatin/prohibitin homologs; putative membrane protease complement(386242..387150) Escherichia coli UM146 12698883 YP_006109309.1 CDS cmtB NC_017632.1 387527 387970 D COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); putative mannitol phosphotransferase subunit EIIA 387527..387970 Escherichia coli UM146 12698884 YP_006109310.1 CDS UM146_01855 NC_017632.1 387998 389386 D COG2213 Phosphotransferase system, mannitol-specific IIBC component; fused mannitol-specific PTS enzymes: IIB component ; IIC component 387998..389386 Escherichia coli UM146 12698885 YP_006109311.1 CDS UM146_01860 NC_017632.1 389401 390678 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative dehydrogenase 389401..390678 Escherichia coli UM146 12698886 YP_006109312.1 CDS UM146_01865 NC_017632.1 390675 390863 D COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins; hypothetical protein 390675..390863 Escherichia coli UM146 12698887 YP_006109313.1 CDS UM146_01870 NC_017632.1 390874 390990 D COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins; fructose-1,6-bisphosphatase II-like protein 390874..390990 Escherichia coli UM146 12698888 YP_006109314.1 CDS UM146_01875 NC_017632.1 391012 391521 D COG3722 Transcriptional regulator; putative DNA-binding transcriptional regulator 391012..391521 Escherichia coli UM146 12698889 YP_006109315.1 CDS frcK NC_017632.1 391518 392231 D COG1072 Panthothenate kinase; putative fructose transport system kinase 391518..392231 Escherichia coli UM146 12698890 YP_006109316.1 CDS UM146_01885 NC_017632.1 392203 392880 R COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; putative ATP-binding protein of ABC transport system complement(392203..392880) Escherichia coli UM146 12698891 YP_006109317.1 CDS UM146_01890 NC_017632.1 392874 393551 R COG1122 ABC-type cobalt transport system, ATPase component; putative ATP-binding protein of ABC transport system complement(392874..393551) Escherichia coli UM146 12698892 YP_006109318.1 CDS UM146_01895 NC_017632.1 393539 394246 R COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; putative ABC-type transport system complement(393539..394246) Escherichia coli UM146 12698893 YP_006109319.1 CDS UM146_01900 NC_017632.1 394247 394825 R putative ABC-type transport system complement(394247..394825) Escherichia coli UM146 12698894 YP_006109320.1 CDS UM146_01905 NC_017632.1 394848 395279 R COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif; hypothetical protein complement(394848..395279) Escherichia coli UM146 12698895 YP_006109321.1 CDS UM146_01910 NC_017632.1 395651 396670 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; erythrose 4-phosphate dehydrogenase 395651..396670 Escherichia coli UM146 12698896 YP_006109322.1 CDS pgk NC_017632.1 396720 397883 D COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase 396720..397883 Escherichia coli UM146 12698897 YP_006109323.1 CDS UM146_01920 NC_017632.1 398098 399177 D COG0191 Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 398098..399177 Escherichia coli UM146 12698898 YP_006109324.1 CDS UM146_01925 NC_017632.1 399368 400228 D COG0668 Small-conductance mechanosensitive channel; mechanosensitive channel MscS 399368..400228 Escherichia coli UM146 12698899 YP_006109325.1 CDS UM146_01930 NC_017632.1 400409 400999 D COG1279 Lysine efflux permease; arginine exporter protein 400409..400999 Escherichia coli UM146 12698900 YP_006109326.1 CDS UM146_01935 NC_017632.1 401092 401832 D COG2968 Uncharacterized conserved protein; hypothetical protein 401092..401832 Escherichia coli UM146 12698901 YP_006109327.1 CDS UM146_01940 NC_017632.1 401990 402886 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 401990..402886 Escherichia coli UM146 12698902 YP_006109328.1 CDS UM146_01945 NC_017632.1 402883 403938 R COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit; hypothetical protein complement(402883..403938) Escherichia coli UM146 12698903 YP_006109329.1 CDS UM146_01950 NC_017632.1 404141 405034 R COG0583 Transcriptional regulator; chromosome replication initiation inhibitor protein complement(404141..405034) Escherichia coli UM146 12698904 YP_006109330.1 CDS UM146_01955 NC_017632.1 405175 405405 D COG0583 Transcriptional regulator; hypothetical protein 405175..405405 Escherichia coli UM146 12698905 YP_006109331.1 CDS UM146_01960 NC_017632.1 405461 406120 D COG0120 Ribose 5-phosphate isomerase; ribose-5-phosphate isomerase A 405461..406120 Escherichia coli UM146 12698906 YP_006109332.1 CDS UM146_01965 NC_017632.1 406376 407608 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 406376..407608 Escherichia coli UM146 12698907 YP_006109333.1 CDS UM146_01970 NC_017632.1 407998 408546 R COG0212 5-formyltetrahydrofolate cyclo-ligase; putative ligase complement(407998..408546) Escherichia coli UM146 12698908 YP_006109334.1 CDS UM146_01975 NC_017632.1 408846 409175 R COG3027 Uncharacterized protein conserved in bacteria; Z-ring-associated protein complement(408846..409175) Escherichia coli UM146 12698909 YP_006109335.1 CDS UM146_01980 NC_017632.1 409343 409921 D COG3079 Uncharacterized protein conserved in bacteria; hypothetical protein 409343..409921 Escherichia coli UM146 12698910 YP_006109336.1 CDS UM146_01985 NC_017632.1 409946 411271 D COG0006 Xaa-Pro aminopeptidase; proline aminopeptidase P II 409946..411271 Escherichia coli UM146 12698911 YP_006109337.1 CDS UM146_01990 NC_017632.1 411268 412446 D COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 2-octaprenyl-6-methoxyphenyl hydroxylase 411268..412446 Escherichia coli UM146 12698912 YP_006109338.1 CDS UM146_01995 NC_017632.1 412469 413671 D COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; hypothetical protein 412469..413671 Escherichia coli UM146 12698913 YP_006109339.1 CDS gcvT NC_017632.1 414119 415213 D COG0404 Glycine cleavage system T protein (aminomethyltransferase); glycine cleavage system aminomethyltransferase T 414119..415213 Escherichia coli UM146 12698914 YP_006109340.1 CDS UM146_02005 NC_017632.1 415237 415626 D COG0509 Glycine cleavage system H protein (lipoate-binding); glycine cleavage system protein H 415237..415626 Escherichia coli UM146 12698915 YP_006109341.1 CDS UM146_02010 NC_017632.1 415744 418617 D COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; glycine dehydrogenase 415744..418617 Escherichia coli UM146 12698916 YP_006109342.1 CDS UM146_02015 NC_017632.1 418783 420276 R COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; 6-phospho-beta-glucosidase complement(418783..420276) Escherichia coli UM146 12698917 YP_006109343.1 CDS UM146_02020 NC_017632.1 420260 420571 D COG3097 Uncharacterized protein conserved in bacteria; hypothetical protein 420260..420571 Escherichia coli UM146 12698918 YP_006109344.1 CDS UM146_02025 NC_017632.1 420735 421394 D COG1272 Predicted membrane protein, hemolysin III homolog; hypothetical protein 420735..421394 Escherichia coli UM146 12698919 YP_006109345.1 CDS UM146_02030 NC_017632.1 421471 422451 R COG0354 Predicted aminomethyltransferase related to GcvT; putative global regulator complement(421471..422451) Escherichia coli UM146 12698920 YP_006109346.1 CDS UM146_02035 NC_017632.1 422694 422960 D COG2938 Uncharacterized conserved protein; hypothetical protein 422694..422960 Escherichia coli UM146 12698921 YP_006109347.1 CDS UM146_02040 NC_017632.1 422941 423348 D hypothetical protein 422941..423348 Escherichia coli UM146 12698922 YP_006109348.1 CDS UM146_02045 NC_017632.1 423388 423909 R COG0716 Flavodoxins; flavodoxin FldB complement(423388..423909) Escherichia coli UM146 12698923 YP_006109349.1 CDS xerD NC_017632.1 424021 424917 D COG4974 Site-specific recombinase XerD; site-specific tyrosine recombinase XerD 424021..424917 Escherichia coli UM146 12698924 YP_006109350.1 CDS UM146_02055 NC_017632.1 424942 425652 D COG1651 Protein-disulfide isomerase; thiol:disulfide interchange protein DsbC 424942..425652 Escherichia coli UM146 12698925 YP_006109351.1 CDS UM146_02060 NC_017632.1 425658 427391 D COG0608 Single-stranded DNA-specific exonuclease; ssDNA exonuclease RecJ 425658..427391 Escherichia coli UM146 12698926 YP_006109352.1 CDS prfB NC_017632.1 427699 428580 D COG1186 Protein chain release factor B; peptide chain release factor 2 427699..428580 Escherichia coli UM146 12698927 YP_006109353.1 CDS lysS NC_017632.1 428590 430107 D COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 428590..430107 Escherichia coli UM146 12698928 YP_006109354.1 CDS UM146_02075 NC_017632.1 430149 430697 R COG1443 Isopentenyldiphosphate isomerase; isopentenyl-diphosphate delta-isomerase complement(430149..430697) Escherichia coli UM146 12698929 YP_006109355.1 CDS UM146_02080 NC_017632.1 430820 430957 R hypothetical protein complement(430820..430957) Escherichia coli UM146 12698930 YP_006109356.1 CDS UM146_02085 NC_017632.1 430947 432395 R COG2233 Xanthine/uracil permeases; transporter complement(430947..432395) Escherichia coli UM146 12698931 YP_006109357.1 CDS UM146_02090 NC_017632.1 432816 434750 D COG1142 Fe-S-cluster-containing hydrogenase components 2; putative oxidoreductase Fe-S binding subunit 432816..434750 Escherichia coli UM146 12698932 YP_006109358.1 CDS UM146_02095 NC_017632.1 434750 435238 D COG1142 Fe-S-cluster-containing hydrogenase components 2; putative oxidoreductase, 4Fe-4S ferredoxin-type subunit 434750..435238 Escherichia coli UM146 12698933 YP_006109359.1 CDS UM146_02100 NC_017632.1 435274 436641 R COG2252 Permeases; transporter complement(435274..436641) Escherichia coli UM146 12698934 YP_006109360.1 CDS UM146_02105 NC_017632.1 436677 437993 R COG0402 Cytosine deaminase and related metal-dependent hydrolases; guanine deaminase complement(436677..437993) Escherichia coli UM146 12698935 YP_006109361.1 CDS UM146_02110 NC_017632.1 438011 439411 R COG2233 Xanthine/uracil permeases; putative transporter complement(438011..439411) Escherichia coli UM146 12698936 YP_006109362.1 CDS UM146_02115 NC_017632.1 439576 442446 R COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; putative selenate reductase subunit YgfN complement(439576..442446) Escherichia coli UM146 12698937 YP_006109363.1 CDS UM146_02120 NC_017632.1 442443 443222 R COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; putative selenate reductase subunit YgfM complement(442443..443222) Escherichia coli UM146 12698938 YP_006109364.1 CDS UM146_02125 NC_017632.1 443273 444601 R COG0402 Cytosine deaminase and related metal-dependent hydrolases; putative chlorohydrolase/aminohydrolase complement(443273..444601) Escherichia coli UM146 12698939 YP_006109365.1 CDS UM146_02130 NC_017632.1 444604 447702 R COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; putative selenate reductase subunit YgfK complement(444604..447702) Escherichia coli UM146 12698940 YP_006109366.1 CDS UM146_02135 NC_017632.1 448024 448602 R COG2068 Uncharacterized MobA-related protein; hypothetical protein complement(448024..448602) Escherichia coli UM146 12698941 YP_006109367.1 CDS UM146_02140 NC_017632.1 448706 449476 D COG0552 Signal recognition particle GTPase; hypothetical protein 448706..449476 Escherichia coli UM146 12698942 YP_006109368.1 CDS UM146_02145 NC_017632.1 449524 451149 D COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; hypothetical protein 449524..451149 Escherichia coli UM146 12698943 YP_006109369.1 CDS UM146_02150 NC_017632.1 451190 452122 R COG0549 Carbamate kinase; carbamate kinase complement(451190..452122) Escherichia coli UM146 12698944 YP_006109370.1 CDS UM146_02155 NC_017632.1 452170 453555 R COG0044 Dihydroorotase and related cyclic amidohydrolases; phenylhydantoinase complement(452170..453555) Escherichia coli UM146 12698945 YP_006109371.1 CDS UM146_02160 NC_017632.1 453608 454819 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; peptidase complement(453608..454819) Escherichia coli UM146 12698946 YP_006109372.1 CDS UM146_02165 NC_017632.1 454877 456073 R COG0133 Tryptophan synthase beta chain; diaminopropionate ammonia-lyase complement(454877..456073) Escherichia coli UM146 12698947 YP_006109373.1 CDS UM146_02170 NC_017632.1 456131 457318 R COG0078 Ornithine carbamoyltransferase; aspartate/ornithine carbamoyltransferase family protein complement(456131..457318) Escherichia coli UM146 12698948 YP_006109374.1 CDS UM146_02175 NC_017632.1 457797 459575 D COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; putative DNA-binding transcriptional regulator 457797..459575 Escherichia coli UM146 12698949 YP_006109375.1 CDS UM146_02180 NC_017632.1 459615 460094 R COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; xanthine dehydrogenase subunit XdhC complement(459615..460094) Escherichia coli UM146 12698950 YP_006109376.1 CDS UM146_02185 NC_017632.1 460091 460969 R COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; xanthine dehydrogenase subunit XdhB complement(460091..460969) Escherichia coli UM146 12698951 YP_006109377.1 CDS UM146_02190 NC_017632.1 460980 463277 R COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; xanthine dehydrogenase subunit XdhA complement(460980..463277) Escherichia coli UM146 12698952 YP_006109378.1 CDS UM146_02195 NC_017632.1 463691 464446 D COG0739 Membrane proteins related to metalloendopeptidases; Tetratricopeptide repeat transcriptional regulator 463691..464446 Escherichia coli UM146 12698953 YP_006109379.1 CDS UM146_02200 NC_017632.1 464915 466144 R COG0814 Amino acid permeases; putative transporter protein complement(464915..466144) Escherichia coli UM146 12698955 YP_006109380.1 CDS UM146_02205 NC_017632.1 466399 467580 D COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 466399..467580 Escherichia coli UM146 12698956 YP_006109381.1 CDS UM146_02210 NC_017632.1 467867 468703 D COG3717 5-keto 4-deoxyuronate isomerase; 5-keto-4-deoxyuronate isomerase 467867..468703 Escherichia coli UM146 12698957 YP_006109382.1 CDS UM146_02215 NC_017632.1 468733 469494 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 2-deoxy-D-gluconate 3-dehydrogenase 468733..469494 Escherichia coli UM146 12698958 YP_006109383.1 CDS UM146_02220 NC_017632.1 469809 471227 D COG0477 Permeases of the major facilitator superfamily; arabinose transporter 469809..471227 Escherichia coli UM146 12698959 YP_006109384.1 CDS UM146_02225 NC_017632.1 471356 472048 D COG1794 Aspartate racemase; putative racemase 471356..472048 Escherichia coli UM146 12698960 YP_006109385.1 CDS UM146_02230 NC_017632.1 472035 472970 R COG0583 Transcriptional regulator; DNA-binding transcriptional regulator LysR complement(472035..472970) Escherichia coli UM146 12698961 YP_006109386.1 CDS UM146_02235 NC_017632.1 473092 474354 D COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 473092..474354 Escherichia coli UM146 12698962 YP_006109387.1 CDS UM146_02240 NC_017632.1 474361 475392 R COG1609 Transcriptional regulators; DNA-binding transcriptional regulator GalR complement(474361..475392) Escherichia coli UM146 12698963 YP_006109388.1 CDS UM146_02245 NC_017632.1 475978 478137 D COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 475978..478137 Escherichia coli UM146 12698964 YP_006109389.1 CDS UM146_02250 NC_017632.1 478130 479323 D COG0477 Permeases of the major facilitator superfamily; lysophospholipid transporter LplT 478130..479323 Escherichia coli UM146 12698965 YP_006109390.1 CDS tas NC_017632.1 479355 480395 R COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); putative aldo-keto reductase complement(479355..480395) Escherichia coli UM146 12698966 YP_006109391.1 CDS UM146_02260 NC_017632.1 480503 480721 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; hypothetical protein complement(480503..480721) Escherichia coli UM146 12698967 YP_006109392.1 CDS UM146_02265 NC_017632.1 480859 481572 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(480859..481572) Escherichia coli UM146 12698968 YP_006109393.1 CDS UM146_02270 NC_017632.1 481641 482330 R COG3066 DNA mismatch repair protein; DNA mismatch repair protein complement(481641..482330) Escherichia coli UM146 12698969 YP_006109394.1 CDS UM146_02275 NC_017632.1 483015 483545 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; dinucleoside polyphosphate hydrolase 483015..483545 Escherichia coli UM146 12698970 YP_006109395.1 CDS UM146_02280 NC_017632.1 483558 485804 D COG3605 Signal transduction protein containing GAF and PtsI domains; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein 483558..485804 Escherichia coli UM146 12698971 YP_006109396.1 CDS UM146_02285 NC_017632.1 485955 486830 D COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase 485955..486830 Escherichia coli UM146 12698972 YP_006109397.1 CDS thyA NC_017632.1 486837 487631 D COG0207 Thymidylate synthase; thymidylate synthase 486837..487631 Escherichia coli UM146 12698973 YP_006109398.1 CDS UM146_02295 NC_017632.1 487816 488286 D COG2165 Type II secretory pathway, pseudopilin PulG; hypothetical protein 487816..488286 Escherichia coli UM146 12698974 YP_006109399.1 CDS UM146_02300 NC_017632.1 488277 488840 D COG4795 Type II secretory pathway, component PulJ; hypothetical protein 488277..488840 Escherichia coli UM146 12698975 YP_006109400.1 CDS UM146_02305 NC_017632.1 488837 489244 D hypothetical protein 488837..489244 Escherichia coli UM146 12698976 YP_006109401.1 CDS UM146_02310 NC_017632.1 489229 489552 D hypothetical protein 489229..489552 Escherichia coli UM146 12698977 YP_006109402.1 CDS recC NC_017632.1 489565 492933 D COG1330 Exonuclease V gamma subunit; exonuclease V subunit gamma 489565..492933 Escherichia coli UM146 12698978 YP_006109403.1 CDS UM146_02320 NC_017632.1 493109 495997 D COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like; protease III 493109..495997 Escherichia coli UM146 12698979 YP_006109404.1 CDS recB NC_017632.1 495990 499532 D COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); exonuclease V subunit beta 495990..499532 Escherichia coli UM146 12698980 YP_006109405.1 CDS recD NC_017632.1 499532 501358 D COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; exonuclease V subunit alpha 499532..501358 Escherichia coli UM146 12698981 YP_006109406.1 CDS UM146_02335 NC_017632.1 501420 502751 R COG0548 Acetylglutamate kinase; N-acetylglutamate synthase complement(501420..502751) Escherichia coli UM146 12698982 YP_006109407.1 CDS UM146_02340 NC_017632.1 502983 504236 D COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 502983..504236 Escherichia coli UM146 12698983 YP_006109408.1 CDS UM146_02355 NC_017632.1 505337 506917 D COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; Phosphotransferase system system, maltose and glucose-specific IIABC component 505337..506917 Escherichia coli UM146 12698984 YP_006109409.1 CDS UM146_02370 NC_017632.1 508094 508690 D COG0794 Predicted sugar phosphate isomerase involved in capsule formation; putative phosphosugar isomerase 508094..508690 Escherichia coli UM146 12698985 YP_006109410.1 CDS UM146_02375 NC_017632.1 508762 509709 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; 2-hydroxyacid dehydrogenase 508762..509709 Escherichia coli UM146 12698986 YP_006109411.1 CDS UM146_02380 NC_017632.1 510011 511387 R COG3515 Uncharacterized protein conserved in bacteria; hypothetical protein complement(510011..511387) Escherichia coli UM146 12698987 YP_006109412.1 CDS UM146_02385 NC_017632.1 511387 511815 R COG3518 Uncharacterized protein conserved in bacteria; hypothetical protein complement(511387..511815) Escherichia coli UM146 12698988 YP_006109413.1 CDS UM146_02390 NC_017632.1 511819 512355 R COG3521 Uncharacterized protein conserved in bacteria; hypothetical protein complement(511819..512355) Escherichia coli UM146 12698989 YP_006109414.1 CDS UM146_02395 NC_017632.1 512336 513415 R COG3520 Uncharacterized protein conserved in bacteria; hypothetical protein complement(512336..513415) Escherichia coli UM146 12698990 YP_006109415.1 CDS UM146_02400 NC_017632.1 513379 515139 R COG3519 Uncharacterized protein conserved in bacteria; type VI secretion protein complement(513379..515139) Escherichia coli UM146 12698991 YP_006109416.1 CDS UM146_02405 NC_017632.1 515509 515952 R hypothetical protein complement(515509..515952) Escherichia coli UM146 12698992 YP_006109417.1 CDS UM146_02410 NC_017632.1 516003 516143 R hypothetical protein complement(516003..516143) Escherichia coli UM146 12698993 YP_006109418.1 CDS UM146_02415 NC_017632.1 516209 516838 R hypothetical protein complement(516209..516838) Escherichia coli UM146 12698994 YP_006109419.1 CDS UM146_02420 NC_017632.1 516838 518421 R COG4104 Uncharacterized conserved protein; hypothetical protein complement(516838..518421) Escherichia coli UM146 12698995 YP_006109420.1 CDS UM146_02425 NC_017632.1 518421 520058 R COG3515 Uncharacterized protein conserved in bacteria; hypothetical protein complement(518421..520058) Escherichia coli UM146 12698996 YP_006109421.1 CDS UM146_02430 NC_017632.1 520024 523377 R COG3523 Uncharacterized protein conserved in bacteria; hypothetical protein complement(520024..523377) Escherichia coli UM146 12698997 YP_006109422.1 CDS UM146_02435 NC_017632.1 523387 524604 R hypothetical protein complement(523387..524604) Escherichia coli UM146 12698998 YP_006109423.1 CDS UM146_02440 NC_017632.1 524525 524785 R COG4104 Uncharacterized conserved protein; hypothetical protein complement(524525..524785) Escherichia coli UM146 12698999 YP_006109424.1 CDS UM146_02455 NC_017632.1 526319 528088 R hypothetical protein complement(526319..528088) Escherichia coli UM146 12699000 YP_006109425.1 CDS UM146_02460 NC_017632.1 528108 530588 R COG3501 Uncharacterized protein conserved in bacteria; hypothetical protein complement(528108..530588) Escherichia coli UM146 12699001 YP_006109426.1 CDS UM146_02465 NC_017632.1 530600 533245 R COG0542 ATPases with chaperone activity, ATP-binding subunit; ATPase complement(530600..533245) Escherichia coli UM146 12699002 YP_006109427.1 CDS UM146_02470 NC_017632.1 533437 533928 R COG3157 Hemolysin-coregulated protein (uncharacterized); hypothetical protein complement(533437..533928) Escherichia coli UM146 12699003 YP_006109428.1 CDS UM146_02475 NC_017632.1 533986 535638 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; hypothetical protein complement(533986..535638) Escherichia coli UM146 12699004 YP_006109429.1 CDS UM146_02480 NC_017632.1 535651 536316 R COG3455 Uncharacterized protein conserved in bacteria; DotU family type IV / VI secretion system protein complement(535651..536316) Escherichia coli UM146 12699005 YP_006109430.1 CDS UM146_02485 NC_017632.1 536313 537650 R COG3522 Uncharacterized protein conserved in bacteria; hypothetical protein complement(536313..537650) Escherichia coli UM146 12699006 YP_006109431.1 CDS UM146_02490 NC_017632.1 537668 539206 R COG3517 Uncharacterized protein conserved in bacteria; hypothetical protein complement(537668..539206) Escherichia coli UM146 12699007 YP_006109432.1 CDS UM146_02495 NC_017632.1 539265 539765 R COG3516 Uncharacterized protein conserved in bacteria; hypothetical protein complement(539265..539765) Escherichia coli UM146 12699008 YP_006109433.1 CDS mltA NC_017632.1 540907 542004 D COG2821 Membrane-bound lytic murein transglycosylase; murein transglycosylase A 540907..542004 Escherichia coli UM146 12699012 YP_006109434.1 CDS UM146_02505 NC_017632.1 542081 542887 D COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; hypothetical protein 542081..542887 Escherichia coli UM146 12699013 YP_006109435.1 CDS UM146_02510 NC_017632.1 542938 543381 R COG2166 SufE protein probably involved in Fe-S center assembly; putative Fe-S metabolism protein (sufE-like) complement(542938..543381) Escherichia coli UM146 12699014 YP_006109436.1 CDS UM146_02515 NC_017632.1 543381 544586 R COG0520 Selenocysteine lyase; cysteine sulfinate desulfinase complement(543381..544586) Escherichia coli UM146 12699015 YP_006109437.1 CDS UM146_02520 NC_017632.1 544778 545005 D hypothetical protein 544778..545005 Escherichia coli UM146 12699016 YP_006109438.1 CDS UM146_02525 NC_017632.1 545356 546273 D COG0583 Transcriptional regulator; DNA-binding transcriptional activator GcvA 545356..546273 Escherichia coli UM146 12699017 YP_006109439.1 CDS UM146_02530 NC_017632.1 546292 546687 D COG2363 Uncharacterized small membrane protein; hypothetical protein 546292..546687 Escherichia coli UM146 12699018 YP_006109440.1 CDS UM146_02535 NC_017632.1 546680 547780 D COG2933 Predicted SAM-dependent methyltransferase; putative RNA 2'-O-ribose methyltransferase 546680..547780 Escherichia coli UM146 12699019 YP_006109441.1 CDS UM146_02540 NC_017632.1 547824 548555 R COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional activator FucR complement(547824..548555) Escherichia coli UM146 12699020 YP_006109442.1 CDS UM146_02545 NC_017632.1 548613 549035 R COG4154 Fucose dissimilation pathway protein FucU; L-fucose mutarotase complement(548613..549035) Escherichia coli UM146 12699021 YP_006109443.1 CDS UM146_02550 NC_017632.1 549037 550455 R COG1070 Sugar (pentulose and hexulose) kinases; L-fuculokinase complement(549037..550455) Escherichia coli UM146 12699022 YP_006109444.1 CDS fucI NC_017632.1 550564 552339 R COG2407 L-fucose isomerase and related proteins; L-fucose isomerase complement(550564..552339) Escherichia coli UM146 12699023 YP_006109445.1 CDS UM146_02560 NC_017632.1 552372 553688 R COG0738 Fucose permease; L-fucose transporter complement(552372..553688) Escherichia coli UM146 12699024 YP_006109446.1 CDS UM146_02565 NC_017632.1 554235 554882 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-fuculose phosphate aldolase 554235..554882 Escherichia coli UM146 12699025 YP_006109447.1 CDS UM146_02570 NC_017632.1 554910 556058 D COG1454 Alcohol dehydrogenase, class IV; L-1,2-propanediol oxidoreductase 554910..556058 Escherichia coli UM146 12699026 YP_006109448.1 CDS xni NC_017632.1 556163 556918 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); exonuclease IX complement(556163..556918) Escherichia coli UM146 12699027 YP_006109449.1 CDS UM146_02580 NC_017632.1 557030 558397 R COG1760 L-serine deaminase; L-serine deaminase II complement(557030..558397) Escherichia coli UM146 12699028 YP_006109450.1 CDS UM146_02585 NC_017632.1 558455 559744 R COG0814 Amino acid permeases; serine transporter complement(558455..559744) Escherichia coli UM146 12699029 YP_006109451.1 CDS UM146_02590 NC_017632.1 560301 561665 R COG1611 Predicted Rossmann fold nucleotide-binding protein; hypothetical protein complement(560301..561665) Escherichia coli UM146 12699030 YP_006109452.1 CDS queF NC_017632.1 561777 562625 R COG2904 Uncharacterized protein conserved in bacteria; 7-cyano-7-deazaguanine reductase complement(561777..562625) Escherichia coli UM146 12699031 YP_006109453.1 CDS UM146_02600 NC_017632.1 562693 563238 D SecY interacting protein Syd 562693..563238 Escherichia coli UM146 12699032 YP_006109454.1 CDS UM146_02605 NC_017632.1 563488 563613 D hypothetical protein 563488..563613 Escherichia coli UM146 12699033 YP_006109455.1 CDS UM146_02610 NC_017632.1 563860 564189 D COG3098 Uncharacterized protein conserved in bacteria; hypothetical protein 563860..564189 Escherichia coli UM146 12699034 YP_006109456.1 CDS UM146_02615 NC_017632.1 564189 564971 D COG0564 Pseudouridylate synthases, 23S RNA-specific; tRNA pseudouridine synthase C 564189..564971 Escherichia coli UM146 12699035 YP_006109457.1 CDS UM146_02620 NC_017632.1 564989 565438 D COG0716 Flavodoxins; flavodoxin 564989..565438 Escherichia coli UM146 12699036 YP_006109458.1 CDS UM146_02625 NC_017632.1 565872 567224 D COG0477 Permeases of the major facilitator superfamily; putative D-glucarate transporter GudP 565872..567224 Escherichia coli UM146 12699037 YP_006109459.1 CDS UM146_02630 NC_017632.1 567226 568566 D COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; glucarate dehydratase 567226..568566 Escherichia coli UM146 12699038 YP_006109460.1 CDS UM146_02635 NC_017632.1 568587 569927 D COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; (D)-glucarate dehydratase 1 568587..569927 Escherichia coli UM146 12699039 YP_006109461.1 CDS UM146_02640 NC_017632.1 570158 572914 R COG0642 Signal transduction histidine kinase; hybrid sensory histidine kinase BarA complement(570158..572914) Escherichia coli UM146 12699040 YP_006109462.1 CDS rumA NC_017632.1 572971 574272 D COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; 23S rRNA 5-methyluridine methyltransferase 572971..574272 Escherichia coli UM146 12699041 YP_006109463.1 CDS relA NC_017632.1 574320 576554 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; GDP/GTP pyrophosphokinase 574320..576554 Escherichia coli UM146 12699042 YP_006109464.1 CDS UM146_02655 NC_017632.1 576632 576880 D COG2336 Growth regulator; antitoxin MazE 576632..576880 Escherichia coli UM146 12699043 YP_006109465.1 CDS UM146_02660 NC_017632.1 576880 577215 D COG2337 Growth inhibitor; toxin ChpA 576880..577215 Escherichia coli UM146 12699044 YP_006109466.1 CDS mazG NC_017632.1 577287 578078 D COG1694 Predicted pyrophosphatase; nucleoside triphosphate pyrophosphohydrolase 577287..578078 Escherichia coli UM146 12699045 YP_006109467.1 CDS pyrG NC_017632.1 578306 579943 D COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase 578306..579943 Escherichia coli UM146 12699046 YP_006109468.1 CDS eno NC_017632.1 580031 581329 D COG0148 Enolase; phosphopyruvate hydratase 580031..581329 Escherichia coli UM146 12699047 YP_006109469.1 CDS UM146_02680 NC_017632.1 581389 582294 R COG1512 Beta-propeller domains of methanol dehydrogenase type; hypothetical protein complement(581389..582294) Escherichia coli UM146 12699048 YP_006109470.1 CDS UM146_02685 NC_017632.1 582288 583436 R COG1512 Beta-propeller domains of methanol dehydrogenase type; hypothetical protein complement(582288..583436) Escherichia coli UM146 12699049 YP_006109471.1 CDS UM146_02690 NC_017632.1 583451 584260 R COG1512 Beta-propeller domains of methanol dehydrogenase type; hypothetical protein complement(583451..584260) Escherichia coli UM146 12699050 YP_006109472.1 CDS UM146_02695 NC_017632.1 584358 584972 R COG1704 Uncharacterized conserved protein; hypothetical protein complement(584358..584972) Escherichia coli UM146 12699051 YP_006109473.1 CDS UM146_02700 NC_017632.1 585145 585816 D COG0602 Organic radical activating enzymes; hypothetical protein 585145..585816 Escherichia coli UM146 12699052 YP_006109474.1 CDS UM146_02705 NC_017632.1 586290 587768 R COG1070 Sugar (pentulose and hexulose) kinases; putative kinase complement(586290..587768) Escherichia coli UM146 12699053 YP_006109475.1 CDS UM146_02720 NC_017632.1 589390 590175 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); putative deoxygluconate dehydrogenase 589390..590175 Escherichia coli UM146 12699054 YP_006109476.1 CDS UM146_02725 NC_017632.1 590245 591699 D COG0277 FAD/FMN-containing dehydrogenases; putative FAD containing dehydrogenase 590245..591699 Escherichia coli UM146 12699055 YP_006109477.1 CDS UM146_02730 NC_017632.1 591793 593130 D COG0477 Permeases of the major facilitator superfamily; putative transporter 591793..593130 Escherichia coli UM146 12699056 YP_006109478.1 CDS UM146_02745 NC_017632.1 593883 594743 D COG2025 Electron transfer flavoprotein, alpha subunit; putative flavoprotein 593883..594743 Escherichia coli UM146 12699057 YP_006109479.1 CDS UM146_02750 NC_017632.1 594891 595466 R COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding); putative anti-terminator regulatory protein complement(594891..595466) Escherichia coli UM146 12699058 YP_006109480.1 CDS UM146_02755 NC_017632.1 595483 595743 R COG2440 Ferredoxin-like protein; ferredoxin-like protein YgcO complement(595483..595743) Escherichia coli UM146 12699059 YP_006109481.1 CDS UM146_02760 NC_017632.1 595734 597005 R COG0644 Dehydrogenases (flavoproteins); putative oxidoreductase with FAD/NAD(P)-binding domain complement(595734..597005) Escherichia coli UM146 12699060 YP_006109482.1 CDS UM146_02765 NC_017632.1 597083 597445 R COG0720 6-pyruvoyl-tetrahydropterin synthase; putative 6-pyruvoyl tetrahydrobiopterin synthase complement(597083..597445) Escherichia coli UM146 12699061 YP_006109483.1 CDS cysJ NC_017632.1 597764 599563 D COG0369 Sulfite reductase, alpha subunit (flavoprotein); sulfite reductase subunit alpha 597764..599563 Escherichia coli UM146 12699062 YP_006109484.1 CDS UM146_02775 NC_017632.1 599563 601275 D COG0155 Sulfite reductase, beta subunit (hemoprotein); sulfite reductase subunit beta 599563..601275 Escherichia coli UM146 12699063 YP_006109485.1 CDS UM146_02780 NC_017632.1 601349 602083 D COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes; phosphoadenosine phosphosulfate reductase 601349..602083 Escherichia coli UM146 12699064 YP_006109486.1 CDS UM146_02785 NC_017632.1 602348 602500 D Small toxic membrane polypeptide 602348..602500 Escherichia coli UM146 12699065 YP_006109487.1 CDS UM146_02790 NC_017632.1 602625 603662 R COG2234 Predicted aminopeptidases; alkaline phosphatase isozyme conversion aminopeptidase complement(602625..603662) Escherichia coli UM146 12699066 YP_006109488.1 CDS UM146_02795 NC_017632.1 603914 604822 D COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes; sulfate adenylyltransferase subunit 2 603914..604822 Escherichia coli UM146 12699067 YP_006109489.1 CDS cysN NC_017632.1 604824 606251 D COG2895 GTPases - Sulfate adenylate transferase subunit 1; sulfate adenylyltransferase subunit 1 604824..606251 Escherichia coli UM146 12699068 YP_006109490.1 CDS UM146_02805 NC_017632.1 606251 606856 D COG0529 Adenylylsulfate kinase and related kinases; adenylylsulfate kinase 606251..606856 Escherichia coli UM146 12699069 YP_006109491.1 CDS UM146_02810 NC_017632.1 606906 607229 D hypothetical protein 606906..607229 Escherichia coli UM146 12699070 YP_006109492.1 CDS ftsB NC_017632.1 607422 607733 D COG2919 Septum formation initiator; cell division protein FtsB 607422..607733 Escherichia coli UM146 12699071 YP_006109493.1 CDS ispD NC_017632.1 607752 608462 D COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 607752..608462 Escherichia coli UM146 12699072 YP_006109494.1 CDS ispF NC_017632.1 608462 608941 D COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 608462..608941 Escherichia coli UM146 12699073 YP_006109495.1 CDS truD NC_017632.1 608938 609987 D COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 608938..609987 Escherichia coli UM146 12699074 YP_006109496.1 CDS surE NC_017632.1 609968 610729 D COG0496 Predicted acid phosphatase; stationary phase survival protein SurE 609968..610729 Escherichia coli UM146 12699075 YP_006109497.1 CDS pcm NC_017632.1 610723 611349 D COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 610723..611349 Escherichia coli UM146 12699076 YP_006109498.1 CDS nlpD NC_017632.1 611489 612628 D COG0739 Membrane proteins related to metalloendopeptidases; lipoprotein NlpD 611489..612628 Escherichia coli UM146 12699077 YP_006109499.1 CDS UM146_02850 NC_017632.1 612691 613683 D COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoS 612691..613683 Escherichia coli UM146 12699078 YP_006109500.1 CDS UM146_02855 NC_017632.1 613861 614412 R COG0655 Multimeric flavodoxin WrbA; putative protein with flavodoxin fold complement(613861..614412) Escherichia coli UM146 12699079 YP_006109501.1 CDS UM146_02860 NC_017632.1 614637 615680 D COG0491 Zn-dependent hydrolases, including glyoxylases; putative exported Zn-dependent hydrolase 614637..615680 Escherichia coli UM146 12699080 YP_006109502.1 CDS UM146_02865 NC_017632.1 615823 617187 R COG2610 H+/gluconate symporter and related permeases; inner membrane permease YgbN complement(615823..617187) Escherichia coli UM146 12699081 YP_006109503.1 CDS UM146_02870 NC_017632.1 617276 618052 R COG3622 Hydroxypyruvate isomerase; hypothetical protein complement(617276..618052) Escherichia coli UM146 12699082 YP_006109504.1 CDS UM146_02875 NC_017632.1 618057 618695 R COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; putative aldolase complement(618057..618695) Escherichia coli UM146 12699083 YP_006109505.1 CDS UM146_02880 NC_017632.1 618692 619954 R COG3395 Uncharacterized protein conserved in bacteria; hypothetical protein complement(618692..619954) Escherichia coli UM146 12699084 YP_006109506.1 CDS UM146_02885 NC_017632.1 619951 620859 R COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; putative dehydrogenase, with NAD(P)-binding Rossmann-fold domain complement(619951..620859) Escherichia coli UM146 12699085 YP_006109507.1 CDS UM146_02890 NC_017632.1 621055 621822 D COG1349 Transcriptional regulators of sugar metabolism; putative DNA-binding transcriptional regulator 621055..621822 Escherichia coli UM146 12699086 YP_006109508.1 CDS UM146_02895 NC_017632.1 621873 622181 R COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; serine/threonine-specific protein phosphatase 2 complement(621873..622181) Escherichia coli UM146 12699087 YP_006109509.1 CDS UM146_02900 NC_017632.1 622252 622527 D COG3677 Transposase and inactivated derivatives; transposase 622252..622527 Escherichia coli UM146 12699088 YP_006109510.1 CDS UM146_02905 NC_017632.1 622446 622949 D COG1662 Transposase and inactivated derivatives, IS1 family; InsBcp5 protein 622446..622949 Escherichia coli UM146 12699089 YP_006109511.1 CDS UM146_02910 NC_017632.1 623214 625775 R COG0249 Mismatch repair ATPase (MutS family); DNA mismatch repair protein MutS complement(623214..625775) Escherichia coli UM146 12699090 YP_006109512.1 CDS UM146_02915 NC_017632.1 626061 626405 D hypothetical protein 626061..626405 Escherichia coli UM146 12699091 YP_006109513.1 CDS UM146_02920 NC_017632.1 626444 626872 R COG2005 N-terminal domain of molybdenum-binding protein; Putative molybdenum-pterin-binding-protein complement(626444..626872) Escherichia coli UM146 12699092 YP_006109514.1 CDS UM146_02925 NC_017632.1 626917 628995 R COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains; DNA-binding transcriptional activator complement(626917..628995) Escherichia coli UM146 12699093 YP_006109515.1 CDS UM146_02930 NC_017632.1 629069 630079 R COG0309 Hydrogenase maturation factor; hydrogenase expression/formation protein HypE complement(629069..630079) Escherichia coli UM146 12699094 YP_006109516.1 CDS UM146_02935 NC_017632.1 630076 631197 R COG0409 Hydrogenase maturation factor; hydrogenase expression/formation protein HypD complement(630076..631197) Escherichia coli UM146 12699095 YP_006109517.1 CDS UM146_02940 NC_017632.1 631197 631469 R COG0298 Hydrogenase maturation factor; hydrogenase assembly chaperone complement(631197..631469) Escherichia coli UM146 12699096 YP_006109518.1 CDS UM146_02945 NC_017632.1 631460 632332 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; hydrogenase nickel incorporation protein HypB complement(631460..632332) Escherichia coli UM146 12699097 YP_006109519.1 CDS hypA NC_017632.1 632336 632698 R COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein complement(632336..632698) Escherichia coli UM146 12699098 YP_006109520.1 CDS UM146_02955 NC_017632.1 632898 633359 D formate hydrogenlyase regulatory protein HycA 632898..633359 Escherichia coli UM146 12699099 YP_006109521.1 CDS UM146_02960 NC_017632.1 633484 634095 D COG1142 Fe-S-cluster-containing hydrogenase components 2; hydrogenase 3, Fe-S subunit 633484..634095 Escherichia coli UM146 12699100 YP_006109522.1 CDS UM146_02965 NC_017632.1 634092 635918 D COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; formate hydrogenlyase subunit 3 634092..635918 Escherichia coli UM146 12699101 YP_006109523.1 CDS UM146_02970 NC_017632.1 635921 636844 D COG0650 Formate hydrogenlyase subunit 4; hydrogenase 3, membrane subunit 635921..636844 Escherichia coli UM146 12699102 YP_006109524.1 CDS UM146_02975 NC_017632.1 636862 638571 D COG3262 Ni,Fe-hydrogenase III component G; Formate hydrogenlyase, subunit E 636862..638571 Escherichia coli UM146 12699103 YP_006109525.1 CDS UM146_02980 NC_017632.1 638581 639123 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); formate hydrogenlyase complex iron-sulfur subunit 638581..639123 Escherichia coli UM146 12699104 YP_006109526.1 CDS UM146_02985 NC_017632.1 639123 639890 D COG3260 Ni,Fe-hydrogenase III small subunit; hydrogenase 3 and formate hydrogenase complex, HycG subunit 639123..639890 Escherichia coli UM146 12699105 YP_006109527.1 CDS UM146_02990 NC_017632.1 639887 640297 D protein required for maturation of hydrogenase 3 639887..640297 Escherichia coli UM146 12699106 YP_006109528.1 CDS hycI NC_017632.1 640290 640760 D COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 3 maturation protease 640290..640760 Escherichia coli UM146 12699107 YP_006109529.1 CDS UM146_03000 NC_017632.1 640812 640979 D hypothetical protein 640812..640979 Escherichia coli UM146 12699108 YP_006109530.1 CDS UM146_03005 NC_017632.1 641005 641424 D COG5499 Predicted transcription regulator containing HTH domain; putative HTH-type transcriptional regulator ygjM 641005..641424 Escherichia coli UM146 12699109 YP_006109531.1 CDS UM146_03010 NC_017632.1 641522 642946 R COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; cryptic 6-phospho-beta-glucosidase complement(641522..642946) Escherichia coli UM146 12699110 YP_006109532.1 CDS UM146_03015 NC_017632.1 642955 644412 R COG1264 Phosphotransferase system IIB components; cellobiose/arbutin/salicin-specific PTS system components IIBC complement(642955..644412) Escherichia coli UM146 12699111 YP_006109533.1 CDS UM146_03020 NC_017632.1 644630 645682 D COG1609 Transcriptional regulators; transcriptional regulator 644630..645682 Escherichia coli UM146 12699112 YP_006109534.1 CDS UM146_03025 NC_017632.1 645831 646358 D COG1142 Fe-S-cluster-containing hydrogenase components 2; electron transport protein HydN 645831..646358 Escherichia coli UM146 12699113 YP_006109535.1 CDS UM146_03030 NC_017632.1 646511 648763 D COG0068 Hydrogenase maturation factor; hydrogenase maturation protein 646511..648763 Escherichia coli UM146 12699114 YP_006109536.1 CDS UM146_03035 NC_017632.1 648987 650120 R COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; nitric oxide reductase complement(648987..650120) Escherichia coli UM146 12699115 YP_006109537.1 CDS UM146_03040 NC_017632.1 650117 651556 R COG0426 Uncharacterized flavoproteins; anaerobic nitric oxide reductase flavorubredoxin complement(650117..651556) Escherichia coli UM146 12699116 YP_006109538.1 CDS UM146_03045 NC_017632.1 651743 653257 D COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains; anaerobic nitric oxide reductase transcriptional regulator 651743..653257 Escherichia coli UM146 12699117 YP_006109539.1 CDS gutQ NC_017632.1 653254 654219 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; D-arabinose 5-phosphate isomerase complement(653254..654219) Escherichia coli UM146 12699118 YP_006109540.1 CDS srlR NC_017632.1 654212 654985 R COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional repressor SrlR complement(654212..654985) Escherichia coli UM146 12699119 YP_006109541.1 CDS UM146_03060 NC_017632.1 655052 655411 R COG4578 Glucitol operon activator; DNA-binding transcriptional activator GutM complement(655052..655411) Escherichia coli UM146 12699120 YP_006109542.1 CDS UM146_03065 NC_017632.1 655517 656296 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); sorbitol-6-phosphate dehydrogenase complement(655517..656296) Escherichia coli UM146 12699121 YP_006109543.1 CDS UM146_03070 NC_017632.1 656300 656671 R COG3731 Phosphotransferase system sorbitol-specific component IIA; glucitol/sorbitol-specific PTS system component IIA complement(656300..656671) Escherichia coli UM146 12699122 YP_006109544.1 CDS UM146_03075 NC_017632.1 656682 657641 R COG3732 Phosphotransferase system sorbitol-specific component IIBC; glucitol/sorbitol-specific enzyme IIB component of PTS complement(656682..657641) Escherichia coli UM146 12699123 YP_006109545.1 CDS UM146_03080 NC_017632.1 657638 658201 R COG3730 Phosphotransferase system sorbitol-specific component IIC; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(657638..658201) Escherichia coli UM146 12699124 YP_006109546.1 CDS UM146_03085 NC_017632.1 658458 659543 D COG2951 Membrane-bound lytic murein transglycosylase B; murein hydrolase B 658458..659543 Escherichia coli UM146 12699125 YP_006109547.1 CDS UM146_03090 NC_017632.1 659688 660185 D COG1546 Uncharacterized protein (competence- and mitomycin-induced); competence damage-inducible protein A 659688..660185 Escherichia coli UM146 12699126 YP_006109548.1 CDS recA NC_017632.1 660265 661326 D COG0468 RecA/RadA recombinase; recombinase A 660265..661326 Escherichia coli UM146 12699127 YP_006109549.1 CDS recX NC_017632.1 661395 661895 D COG2137 Uncharacterized protein conserved in bacteria; recombination regulator RecX 661395..661895 Escherichia coli UM146 12699128 YP_006109550.1 CDS UM146_03105 NC_017632.1 661936 662085 R hypothetical protein complement(661936..662085) Escherichia coli UM146 12699129 YP_006109551.1 CDS alaS NC_017632.1 662023 664653 D COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase 662023..664653 Escherichia coli UM146 12699130 YP_006109552.1 CDS UM146_03115 NC_017632.1 664888 665073 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 664888..665073 Escherichia coli UM146 12699131 YP_006109553.1 CDS UM146_03125 NC_017632.1 666123 666689 D COG0637 Predicted phosphatase/phosphohexomutase; fructose-1-phosphatase 666123..666689 Escherichia coli UM146 12699136 YP_006109554.1 CDS UM146_03130 NC_017632.1 666830 667099 D COG1238 Predicted membrane protein; putative inner membrane protein 666830..667099 Escherichia coli UM146 12699137 YP_006109555.1 CDS UM146_03135 NC_017632.1 667186 668742 D COG2918 Gamma-glutamylcysteine synthetase; glutamate--cysteine ligase 667186..668742 Escherichia coli UM146 12699138 YP_006109556.1 CDS UM146_03140 NC_017632.1 668893 669408 D COG1854 LuxS protein involved in autoinducer AI2 synthesis; S-ribosylhomocysteinase 668893..669408 Escherichia coli UM146 12699139 YP_006109557.1 CDS UM146_03145 NC_017632.1 669459 670571 R COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; hypothetical protein complement(669459..670571) Escherichia coli UM146 12699140 YP_006109558.1 CDS UM146_03150 NC_017632.1 670568 671275 R hypothetical protein complement(670568..671275) Escherichia coli UM146 12699141 YP_006109559.1 CDS UM146_03155 NC_017632.1 671533 673071 R COG0477 Permeases of the major facilitator superfamily; multidrug efflux system protein complement(671533..673071) Escherichia coli UM146 12699142 YP_006109560.1 CDS UM146_03160 NC_017632.1 673088 674260 R COG1566 Multidrug resistance efflux pump; multidrug efflux system protein EmrA complement(673088..674260) Escherichia coli UM146 12699143 YP_006109561.1 CDS UM146_03165 NC_017632.1 674387 674917 R COG1846 Transcriptional regulators; transcriptional repressor MprA complement(674387..674917) Escherichia coli UM146 12699144 YP_006109562.1 CDS UM146_03170 NC_017632.1 675008 675343 R hypothetical protein complement(675008..675343) Escherichia coli UM146 12699145 YP_006109563.1 CDS UM146_03175 NC_017632.1 675333 676070 R COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); putative transporter complement(675333..676070) Escherichia coli UM146 12699146 YP_006109564.1 CDS UM146_03180 NC_017632.1 676194 677378 R COG0477 Permeases of the major facilitator superfamily; putative transport protein complement(676194..677378) Escherichia coli UM146 12699147 YP_006109565.1 CDS proX NC_017632.1 677570 678562 R COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; glycine betaine transporter periplasmic subunit complement(677570..678562) Escherichia coli UM146 12699148 YP_006109566.1 CDS UM146_03190 NC_017632.1 678620 679684 R COG4176 ABC-type proline/glycine betaine transport system, permease component; glycine betaine transporter membrane protein complement(678620..679684) Escherichia coli UM146 12699149 YP_006109567.1 CDS UM146_03195 NC_017632.1 679677 680879 R COG4175 ABC-type proline/glycine betaine transport system, ATPase component; glycine betaine transporter ATP-binding subunit complement(679677..680879) Escherichia coli UM146 12699150 YP_006109568.1 CDS nrdF NC_017632.1 681235 682194 R COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta complement(681235..682194) Escherichia coli UM146 12699151 YP_006109569.1 CDS UM146_03205 NC_017632.1 682204 684348 R COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha complement(682204..684348) Escherichia coli UM146 12699152 YP_006109570.1 CDS nrdI NC_017632.1 684321 684731 R COG1780 Protein involved in ribonucleotide reduction; ribonucleotide reductase stimulatory protein complement(684321..684731) Escherichia coli UM146 12699153 YP_006109571.1 CDS UM146_03215 NC_017632.1 684728 684973 R COG0695 Glutaredoxin and related proteins; glutaredoxin-like protein complement(684728..684973) Escherichia coli UM146 12699154 YP_006109572.1 CDS UM146_03220 NC_017632.1 685182 685613 R COG2128 Uncharacterized conserved protein; hypothetical protein complement(685182..685613) Escherichia coli UM146 12699155 YP_006109573.1 CDS UM146_03225 NC_017632.1 685701 687035 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; putative fused protein: aminotransaminase/transcriptional regulator, GntR family 685701..687035 Escherichia coli UM146 12699156 YP_006109574.1 CDS UM146_03230 NC_017632.1 687092 687421 R COG4575 Uncharacterized conserved protein; hypothetical protein complement(687092..687421) Escherichia coli UM146 12699157 YP_006109575.1 CDS UM146_03235 NC_017632.1 687573 687917 D hypothetical protein 687573..687917 Escherichia coli UM146 12699158 YP_006109576.1 CDS UM146_03240 NC_017632.1 687954 688403 R hypothetical protein complement(687954..688403) Escherichia coli UM146 12699159 YP_006109577.1 CDS UM146_03245 NC_017632.1 689071 689475 D COG2916 DNA-binding protein H-NS; DNA binding protein 689071..689475 Escherichia coli UM146 12699160 YP_006109578.1 CDS UM146_03250 NC_017632.1 689903 690046 R COG0607 Rhodanese-related sulfurtransferase; hypothetical protein complement(689903..690046) Escherichia coli UM146 12699161 YP_006109579.1 CDS UM146_03255 NC_017632.1 690056 690355 R COG0640 Predicted transcriptional regulators; DNA-binding transcriptional regulator complement(690056..690355) Escherichia coli UM146 12699162 YP_006109580.1 CDS UM146_03260 NC_017632.1 690538 690696 D COG0401 Uncharacterized homolog of Blt101; hypothetical protein 690538..690696 Escherichia coli UM146 12699163 YP_006109581.1 CDS UM146_03265 NC_017632.1 690780 691229 D COG1652 Uncharacterized protein containing LysM domain; LysM domain/BON superfamily protein 690780..691229 Escherichia coli UM146 12699164 YP_006109582.1 CDS UM146_03270 NC_017632.1 691230 691892 R COG1802 Transcriptional regulators; DNA-binding transcriptional regulator CsiR complement(691230..691892) Escherichia coli UM146 12699165 YP_006109583.1 CDS UM146_03275 NC_017632.1 691913 693313 R COG1113 Gamma-aminobutyrate permease and related permeases; gamma-aminobutyrate transporter complement(691913..693313) Escherichia coli UM146 12699166 YP_006109584.1 CDS UM146_03280 NC_017632.1 693551 694831 R COG0160 4-aminobutyrate aminotransferase and related aminotransferases; 4-aminobutyrate aminotransferase complement(693551..694831) Escherichia coli UM146 12699167 YP_006109585.1 CDS gabD NC_017632.1 694845 696293 R COG1012 NAD-dependent aldehyde dehydrogenases; succinate-semialdehyde dehydrogenase I complement(694845..696293) Escherichia coli UM146 12699168 YP_006109586.1 CDS UM146_03290 NC_017632.1 696316 697584 R COG0579 Predicted dehydrogenase; hydroxyglutarate oxidase complement(696316..697584) Escherichia coli UM146 12699169 YP_006109587.1 CDS UM146_03295 NC_017632.1 697604 698581 R hypothetical protein complement(697604..698581) Escherichia coli UM146 12699170 YP_006109588.1 CDS UM146_03300 NC_017632.1 699213 699449 R hypothetical protein complement(699213..699449) Escherichia coli UM146 12699171 YP_006109589.1 CDS UM146_03305 NC_017632.1 699442 700353 D hypothetical protein 699442..700353 Escherichia coli UM146 12699172 YP_006109590.1 CDS UM146_03310 NC_017632.1 700358 700684 D COG2759 Formyltetrahydrofolate synthetase; hypothetical protein 700358..700684 Escherichia coli UM146 12699173 YP_006109591.1 CDS UM146_03315 NC_017632.1 700713 701312 D hypothetical protein 700713..701312 Escherichia coli UM146 12699174 YP_006109592.1 CDS UM146_03320 NC_017632.1 701304 702476 R COG0582 Integrase; hypothetical protein complement(701304..702476) Escherichia coli UM146 12699175 YP_006109593.1 CDS UM146_03325 NC_017632.1 702894 703004 R hypothetical protein complement(702894..703004) Escherichia coli UM146 12699176 YP_006109594.1 CDS UM146_03330 NC_017632.1 703659 704183 R COG1896 Predicted hydrolases of HD superfamily; hypothetical protein complement(703659..704183) Escherichia coli UM146 12699177 YP_006109595.1 CDS UM146_03335 NC_017632.1 704311 705135 R COG5532 Uncharacterized conserved protein; hypothetical protein complement(704311..705135) Escherichia coli UM146 12699178 YP_006109596.1 CDS UM146_03340 NC_017632.1 706032 706544 D hypothetical protein 706032..706544 Escherichia coli UM146 12699179 YP_006109597.1 CDS UM146_03345 NC_017632.1 706747 707421 R COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); repressor protein phage e14; e14 prophage complement(706747..707421) Escherichia coli UM146 12699180 YP_006109598.1 CDS UM146_03350 NC_017632.1 707512 707712 D putative DNA-binding transcriptional regulator 707512..707712 Escherichia coli UM146 12699181 YP_006109599.1 CDS UM146_03355 NC_017632.1 707756 708307 D putative nucleic acid-binding protein; e14 prophage 707756..708307 Escherichia coli UM146 12699182 YP_006109600.1 CDS UM146_03360 NC_017632.1 708304 708642 D hypothetical protein 708304..708642 Escherichia coli UM146 12699183 YP_006109601.1 CDS UM146_03375 NC_017632.1 709589 710083 D hypothetical protein 709589..710083 Escherichia coli UM146 12699184 YP_006109602.1 CDS UM146_03380 NC_017632.1 710083 710736 D putative AdoMet-dependent methyltransferase 710083..710736 Escherichia coli UM146 12699185 YP_006109603.1 CDS UM146_03385 NC_017632.1 710733 711059 D COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); putative regulatory protein; lexA-binding domain protein 710733..711059 Escherichia coli UM146 12699186 YP_006109604.1 CDS UM146_03390 NC_017632.1 711056 711445 D COG4570 Holliday junction resolvase; Crossover junction endodeoxyribonuclease 711056..711445 Escherichia coli UM146 12699187 YP_006109605.1 CDS UM146_03395 NC_017632.1 711465 712262 D putative KilA protein; KilA-N domain protein 711465..712262 Escherichia coli UM146 12699188 YP_006109606.1 CDS UM146_03400 NC_017632.1 712270 713259 D hypothetical protein 712270..713259 Escherichia coli UM146 12699189 YP_006109607.1 CDS UM146_03405 NC_017632.1 713273 714025 D COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; putative antitermination protein Q; Qin prophage 713273..714025 Escherichia coli UM146 12699190 YP_006109608.1 CDS UM146_03410 NC_017632.1 714211 714546 D hypothetical protein 714211..714546 Escherichia coli UM146 12699191 YP_006109609.1 CDS UM146_03415 NC_017632.1 714906 715004 D gp13 714906..715004 Escherichia coli UM146 12699192 YP_006109610.1 CDS UM146_03420 NC_017632.1 714991 715467 D COG4678 Muramidase (phage lambda lysozyme); Lysozyme (Lysis protein) (Muramidase) (Endolysin) 714991..715467 Escherichia coli UM146 12699193 YP_006109611.1 CDS UM146_03425 NC_017632.1 715464 715901 D endopeptidase; bacteriophage lysis protein 715464..715901 Escherichia coli UM146 12699194 YP_006109612.1 CDS UM146_03430 NC_017632.1 715999 716223 D hypothetical protein 715999..716223 Escherichia coli UM146 12699195 YP_006109613.1 CDS UM146_03435 NC_017632.1 716602 716769 R hypothetical protein complement(716602..716769) Escherichia coli UM146 12699196 YP_006109614.1 CDS UM146_03440 NC_017632.1 716872 717222 D COG1403 Restriction endonuclease; putative endonuclease 716872..717222 Escherichia coli UM146 12699197 YP_006109615.1 CDS UM146_03455 NC_017632.1 717837 719570 D COG4626 Phage terminase-like protein, large subunit; putative phage terminase 717837..719570 Escherichia coli UM146 12699198 YP_006109616.1 CDS UM146_03460 NC_017632.1 719582 719764 D hypothetical protein 719582..719764 Escherichia coli UM146 12699199 YP_006109617.1 CDS UM146_03465 NC_017632.1 719764 721005 D COG4695 Phage-related protein; putative phage portal protein 719764..721005 Escherichia coli UM146 12699200 YP_006109618.1 CDS UM146_03470 NC_017632.1 720983 721633 D COG3740 Phage head maturation protease; putative phage pro-head protease 720983..721633 Escherichia coli UM146 12699201 YP_006109619.1 CDS UM146_03475 NC_017632.1 721648 722853 D COG4653 Predicted phage phi-C31 gp36 major capsid-like protein; putative major capsid protein 721648..722853 Escherichia coli UM146 12699202 YP_006109620.1 CDS UM146_03480 NC_017632.1 722903 723103 D hypothetical protein 722903..723103 Escherichia coli UM146 12699203 YP_006109621.1 CDS UM146_03485 NC_017632.1 723106 723429 D hypothetical protein 723106..723429 Escherichia coli UM146 12699204 YP_006109622.1 CDS UM146_03490 NC_017632.1 723426 723836 D COG5614 Bacteriophage head-tail adaptor; putative phage head-tail adaptor 723426..723836 Escherichia coli UM146 12699205 YP_006109623.1 CDS UM146_03495 NC_017632.1 723811 724317 D hypothetical protein 723811..724317 Escherichia coli UM146 12699206 YP_006109624.1 CDS UM146_03500 NC_017632.1 724314 724874 D hypothetical protein 724314..724874 Escherichia coli UM146 12699207 YP_006109625.1 CDS UM146_03505 NC_017632.1 724883 725053 D hypothetical protein 724883..725053 Escherichia coli UM146 12699208 YP_006109626.1 CDS UM146_03510 NC_017632.1 725037 726533 D COG4386 Mu-like prophage tail sheath protein gpL; Tail sheath protein 725037..726533 Escherichia coli UM146 12699209 YP_006109627.1 CDS UM146_03515 NC_017632.1 726533 726889 D putative phage tail protein 726533..726889 Escherichia coli UM146 12699210 YP_006109628.1 CDS UM146_03520 NC_017632.1 727300 729135 D phage tail tape measure protein 727300..729135 Escherichia coli UM146 12699211 YP_006109629.1 CDS UM146_03525 NC_017632.1 729196 730524 D COG4228 Mu-like prophage DNA circulation protein; Tail/DNA circulation protein 729196..730524 Escherichia coli UM146 12699212 YP_006109630.1 CDS UM146_03530 NC_017632.1 730521 731600 D COG4379 Mu-like prophage tail protein gpP; Tail protein 730521..731600 Escherichia coli UM146 12699213 YP_006109631.1 CDS UM146_03535 NC_017632.1 731600 732148 D COG4384 Mu-like prophage protein gp45; putative baseplate assembly phage protein 731600..732148 Escherichia coli UM146 12699214 YP_006109632.1 CDS UM146_03540 NC_017632.1 732148 732573 D COG4381 Mu-like prophage protein gp46; putative tail protein 732148..732573 Escherichia coli UM146 12699215 YP_006109633.1 CDS UM146_03545 NC_017632.1 732560 733618 D COG3299 Uncharacterized homolog of phage Mu protein gp47; putative baseplate J-like phage protein 732560..733618 Escherichia coli UM146 12699216 YP_006109634.1 CDS UM146_03550 NC_017632.1 733609 734193 D COG3778 Uncharacterized protein conserved in bacteria; hypothetical protein 733609..734193 Escherichia coli UM146 12699217 YP_006109635.1 CDS UM146_03555 NC_017632.1 734197 734595 D putative phage tail protein 734197..734595 Escherichia coli UM146 12699218 YP_006109636.1 CDS UM146_03560 NC_017632.1 734861 734941 D putative phage tail protein 734861..734941 Escherichia coli UM146 12699219 YP_006109637.1 CDS UM146_03565 NC_017632.1 734941 735543 D putative tail fiber chaperone (assembly protein); e14 prophage 734941..735543 Escherichia coli UM146 12699220 YP_006109638.1 CDS UM146_03570 NC_017632.1 735515 735958 R putative tail fiber assembly protein complement(735515..735958) Escherichia coli UM146 12699221 YP_006109639.1 CDS UM146_03575 NC_017632.1 735961 736446 R hypothetical protein complement(735961..736446) Escherichia coli UM146 12699222 YP_006109640.1 CDS UM146_03580 NC_017632.1 736484 736612 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; DNA invertase 736484..736612 Escherichia coli UM146 12699223 YP_006109641.1 CDS UM146_03585 NC_017632.1 736691 738598 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(736691..738598) Escherichia coli UM146 12699224 YP_006109642.1 CDS UM146_03590 NC_017632.1 739023 739160 R putative protein from DinI-like family complement(739023..739160) Escherichia coli UM146 12699225 YP_006109643.1 CDS UM146_03595 NC_017632.1 739650 740423 D COG3680 Uncharacterized protein conserved in bacteria; hypothetical protein 739650..740423 Escherichia coli UM146 12699226 YP_006109644.1 CDS UM146_03600 NC_017632.1 740634 740927 D hypothetical protein 740634..740927 Escherichia coli UM146 12699227 YP_006109645.1 CDS UM146_03605 NC_017632.1 741015 741803 R hypothetical protein complement(741015..741803) Escherichia coli UM146 12699228 YP_006109646.1 CDS UM146_03610 NC_017632.1 741800 741997 R hypothetical protein complement(741800..741997) Escherichia coli UM146 12699229 YP_006109647.1 CDS smpB NC_017632.1 742960 743442 R COG0691 tmRNA-binding protein; SsrA-binding protein complement(742960..743442) Escherichia coli UM146 12699230 YP_006109648.1 CDS UM146_03620 NC_017632.1 743574 744050 D COG2867 Oligoketide cyclase/lipid transport protein; hypothetical protein 743574..744050 Escherichia coli UM146 12699231 YP_006109649.1 CDS UM146_03625 NC_017632.1 744040 744330 D COG2914 Uncharacterized protein conserved in bacteria; hypothetical protein 744040..744330 Escherichia coli UM146 12699232 YP_006109650.1 CDS UM146_03630 NC_017632.1 744392 744733 R COG2913 Small protein A (tmRNA-binding); hypothetical protein complement(744392..744733) Escherichia coli UM146 12699233 YP_006109651.1 CDS UM146_03635 NC_017632.1 744882 746543 R COG0497 ATPase involved in DNA repair; recombination and repair protein complement(744882..746543) Escherichia coli UM146 12699234 YP_006109652.1 CDS ppnK NC_017632.1 746629 747507 R COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase complement(746629..747507) Escherichia coli UM146 12699235 YP_006109653.1 CDS UM146_03645 NC_017632.1 747630 748223 D COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE 747630..748223 Escherichia coli UM146 12699236 YP_006109654.1 CDS UM146_03650 NC_017632.1 748278 749474 R COG4536 Putative Mg2+ and Co2+ transporter CorB; hypothetical protein complement(748278..749474) Escherichia coli UM146 12699237 YP_006109655.1 CDS UM146_03655 NC_017632.1 749585 750451 R COG4137 ABC-type uncharacterized transport system, permease component; hypothetical protein complement(749585..750451) Escherichia coli UM146 12699238 YP_006109656.1 CDS UM146_03660 NC_017632.1 750543 751904 D COG0541 Signal recognition particle GTPase; signal recognition particle protein 750543..751904 Escherichia coli UM146 12699239 YP_006109657.1 CDS rpsP NC_017632.1 752041 752289 D COG0228 Ribosomal protein S16; 30S ribosomal protein S16 752041..752289 Escherichia coli UM146 12699240 YP_006109658.1 CDS rimM NC_017632.1 752308 752856 D COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM 752308..752856 Escherichia coli UM146 12699241 YP_006109659.1 CDS trmD NC_017632.1 752887 753654 D COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 752887..753654 Escherichia coli UM146 12699242 YP_006109660.1 CDS rplS NC_017632.1 753696 754043 D COG0335 Ribosomal protein L19; 50S ribosomal protein L19 753696..754043 Escherichia coli UM146 12699243 YP_006109661.1 CDS UM146_03685 NC_017632.1 754120 754602 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; putative outer membrane lipoprotein complement(754120..754602) Escherichia coli UM146 12699244 YP_006109662.1 CDS UM146_03690 NC_017632.1 754618 755841 R COG2199 FOG: GGDEF domain; hypothetical protein complement(754618..755841) Escherichia coli UM146 12699245 YP_006109663.1 CDS UM146_03695 NC_017632.1 755834 756352 R hypothetical protein complement(755834..756352) Escherichia coli UM146 12699246 YP_006109664.1 CDS UM146_03700 NC_017632.1 756499 756864 R hypothetical protein complement(756499..756864) Escherichia coli UM146 12699247 YP_006109665.1 CDS UM146_03705 NC_017632.1 757074 758144 D COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 757074..758144 Escherichia coli UM146 12699248 YP_006109666.1 CDS tyrA NC_017632.1 758155 759276 D COG1605 Chorismate mutase; bifunctional chorismate mutase/prephenate dehydrogenase 758155..759276 Escherichia coli UM146 12699249 YP_006109667.1 CDS pheA NC_017632.1 759319 760479 R COG1605 Chorismate mutase; bifunctional chorismate mutase/prephenate dehydratase complement(759319..760479) Escherichia coli UM146 12699250 YP_006109668.1 CDS UM146_03720 NC_017632.1 760729 761070 R COG1544 Ribosome-associated protein Y (PSrp-1); translation inhibitor protein RaiA complement(760729..761070) Escherichia coli UM146 12699251 YP_006109669.1 CDS UM146_03725 NC_017632.1 761340 762077 R COG4105 DNA uptake lipoprotein; outer membrane protein assembly complex subunit YfiO complement(761340..762077) Escherichia coli UM146 12699252 YP_006109670.1 CDS rluD NC_017632.1 762212 763192 D COG0564 Pseudouridylate synthases, 23S RNA-specific; 23S rRNA pseudouridine synthase D 762212..763192 Escherichia coli UM146 12699253 YP_006109671.1 CDS UM146_03735 NC_017632.1 763189 763920 D COG1496 Uncharacterized conserved protein; hypothetical protein 763189..763920 Escherichia coli UM146 12699254 YP_006109672.1 CDS UM146_03740 NC_017632.1 764050 766623 D COG0542 ATPases with chaperone activity, ATP-binding subunit; protein disaggregation chaperone 764050..766623 Escherichia coli UM146 12699255 YP_006109673.1 CDS UM146_03745 NC_017632.1 766852 767019 D hypothetical protein 766852..767019 Escherichia coli UM146 12699256 YP_006109674.1 CDS UM146_03750 NC_017632.1 772212 772454 D COG2963 Transposase and inactivated derivatives; IS putative transposase 772212..772454 Escherichia coli UM146 12699261 YP_006109675.1 CDS UM146_03755 NC_017632.1 772559 772732 D transposase ORF A, IS1397 772559..772732 Escherichia coli UM146 12699262 YP_006109676.1 CDS UM146_03760 NC_017632.1 772837 773559 D COG2801 Transposase and inactivated derivatives; transposase ORF B, IS3 family, IS150 group 772837..773559 Escherichia coli UM146 12699263 YP_006109677.1 CDS UM146_03765 NC_017632.1 773803 774207 D COG3547 Transposase and inactivated derivatives; putative transposase 773803..774207 Escherichia coli UM146 12699264 YP_006109678.1 CDS UM146_03770 NC_017632.1 774231 774455 D COG3547 Transposase and inactivated derivatives; hypothetical protein 774231..774455 Escherichia coli UM146 12699265 YP_006109679.1 CDS UM146_03775 NC_017632.1 774593 774769 D COG3547 Transposase and inactivated derivatives; hypothetical protein 774593..774769 Escherichia coli UM146 12699266 YP_006109680.1 CDS UM146_03780 NC_017632.1 775112 776410 D COG0477 Permeases of the major facilitator superfamily; alpha-ketoglutarate transporter 775112..776410 Escherichia coli UM146 12699267 YP_006109681.1 CDS UM146_03785 NC_017632.1 776407 776679 R COG5544 Predicted periplasmic lipoprotein; hypothetical protein complement(776407..776679) Escherichia coli UM146 12699268 YP_006109682.1 CDS pssA NC_017632.1 776776 778131 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylserine synthase complement(776776..778131) Escherichia coli UM146 12699269 YP_006109683.1 CDS UM146_03795 NC_017632.1 778245 780905 R COG1042 Acyl-CoA synthetase (NDP forming); fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit complement(778245..780905) Escherichia coli UM146 12699270 YP_006109684.1 CDS UM146_03800 NC_017632.1 780937 781635 R COG3148 Uncharacterized conserved protein; hypothetical protein complement(780937..781635) Escherichia coli UM146 12699271 YP_006109685.1 CDS UM146_03805 NC_017632.1 781704 782123 R COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 2 complement(781704..782123) Escherichia coli UM146 12699272 YP_006109686.1 CDS UM146_03810 NC_017632.1 782330 783367 D COG0566 rRNA methylases; putative methyltransferase 782330..783367 Escherichia coli UM146 12699273 YP_006109687.1 CDS UM146_03815 NC_017632.1 783415 784104 R COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase complement(783415..784104) Escherichia coli UM146 12699274 YP_006109688.1 CDS UM146_03820 NC_017632.1 784408 784791 D COG3445 Acid-induced glycyl radical enzyme; autonomous glycyl radical cofactor GrcA 784408..784791 Escherichia coli UM146 12699275 YP_006109689.1 CDS UM146_03825 NC_017632.1 784847 785434 R COG1280 Putative threonine efflux protein; neutral amino-acid efflux protein complement(784847..785434) Escherichia coli UM146 12699276 YP_006109690.1 CDS UM146_03830 NC_017632.1 785492 786418 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 785492..786418 Escherichia coli UM146 12699277 YP_006109691.1 CDS UM146_03835 NC_017632.1 786451 787785 R COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase SrmB complement(786451..787785) Escherichia coli UM146 12699278 YP_006109692.1 CDS UM146_03840 NC_017632.1 787917 788654 D COG4123 Predicted O-methyltransferase; putative S-adenosyl-L-methionine-dependent methyltransferase 787917..788654 Escherichia coli UM146 12699279 YP_006109693.1 CDS UM146_03845 NC_017632.1 788639 790261 R COG0029 Aspartate oxidase; L-aspartate oxidase complement(788639..790261) Escherichia coli UM146 12699280 YP_006109694.1 CDS UM146_03850 NC_017632.1 790517 790672 D hypothetical protein 790517..790672 Escherichia coli UM146 12699281 YP_006109695.1 CDS UM146_03855 NC_017632.1 790669 791244 D COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; RNA polymerase sigma factor RpoE 790669..791244 Escherichia coli UM146 12699282 YP_006109696.1 CDS UM146_03860 NC_017632.1 791277 791927 D COG3073 Negative regulator of sigma E activity; anti-RNA polymerase sigma factor SigE 791277..791927 Escherichia coli UM146 12699283 YP_006109697.1 CDS rseB NC_017632.1 791927 792883 D COG3026 Negative regulator of sigma E activity; periplasmic negative regulator of sigmaE 791927..792883 Escherichia coli UM146 12699284 YP_006109698.1 CDS UM146_03870 NC_017632.1 792880 793359 D COG3086 Positive regulator of sigma E activity; SoxR reducing system protein RseC 792880..793359 Escherichia coli UM146 12699285 YP_006109699.1 CDS UM146_03875 NC_017632.1 793557 795356 D COG0481 Membrane GTPase LepA; GTP-binding protein LepA 793557..795356 Escherichia coli UM146 12699286 YP_006109700.1 CDS UM146_03880 NC_017632.1 795372 796346 D COG0681 Signal peptidase I; signal peptidase I 795372..796346 Escherichia coli UM146 12699287 YP_006109701.1 CDS rnc NC_017632.1 796613 797293 D COG0571 dsRNA-specific ribonuclease; ribonuclease III 796613..797293 Escherichia coli UM146 12699288 YP_006109702.1 CDS era NC_017632.1 797290 798195 D COG1159 GTPase; GTP-binding protein Era 797290..798195 Escherichia coli UM146 12699289 YP_006109703.1 CDS recO NC_017632.1 798207 798935 D COG1381 Recombinational DNA repair protein (RecF pathway); DNA repair protein RecO 798207..798935 Escherichia coli UM146 12699290 YP_006109704.1 CDS UM146_03900 NC_017632.1 798947 799678 D COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase 798947..799678 Escherichia coli UM146 12699291 YP_006109705.1 CDS acpS NC_017632.1 799678 800058 D COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase 799678..800058 Escherichia coli UM146 12699292 YP_006109706.1 CDS UM146_03910 NC_017632.1 800753 801013 R COG1145 Ferredoxin; ferredoxin (4Fe-4S cluster-containing protein) (fdx-like) complement(800753..801013) Escherichia coli UM146 12699293 YP_006109707.1 CDS UM146_03915 NC_017632.1 801069 801917 R COG1737 Transcriptional regulators; putative DNA-binding transcriptional regulator complement(801069..801917) Escherichia coli UM146 12699294 YP_006109708.1 CDS UM146_03920 NC_017632.1 802126 802761 D COG0560 Phosphoserine phosphatase; hypothetical protein 802126..802761 Escherichia coli UM146 12699295 YP_006109709.1 CDS UM146_03925 NC_017632.1 802786 803322 D COG0590 Cytosine/adenosine deaminases; tRNA-specific adenosine deaminase 802786..803322 Escherichia coli UM146 12699296 YP_006109710.1 CDS UM146_03930 NC_017632.1 803319 804875 R COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; putative transglycosylase complement(803319..804875) Escherichia coli UM146 12699297 YP_006109711.1 CDS UM146_03935 NC_017632.1 805134 809021 D COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; phosphoribosylformylglycinamidine synthase 805134..809021 Escherichia coli UM146 12699298 YP_006109712.1 CDS UM146_03940 NC_017632.1 809597 811024 D COG0642 Signal transduction histidine kinase; putative sensory kinase in two-component system 809597..811024 Escherichia coli UM146 12699299 YP_006109713.1 CDS UM146_03945 NC_017632.1 811189 811902 D hypothetical protein 811189..811902 Escherichia coli UM146 12699300 YP_006109714.1 CDS UM146_03950 NC_017632.1 811892 813226 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; putative DNA-binding response regulator in two-component system 811892..813226 Escherichia coli UM146 12699301 YP_006109715.1 CDS UM146_03955 NC_017632.1 813287 813625 D COG0347 Nitrogen regulatory protein PII; nitrogen regulatory protein P-II 1 813287..813625 Escherichia coli UM146 12699302 YP_006109716.1 CDS UM146_03960 NC_017632.1 813670 814860 R COG1017 Hemoglobin-like flavoprotein; nitric oxide dioxygenase complement(813670..814860) Escherichia coli UM146 12699303 YP_006109717.1 CDS glyA NC_017632.1 815188 816441 D COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 815188..816441 Escherichia coli UM146 12699304 YP_006109718.1 CDS UM146_03970 NC_017632.1 816505 817698 R COG1940 Transcriptional regulator/sugar kinase; putative DNA-binding transcriptional regulator complement(816505..817698) Escherichia coli UM146 12699305 YP_006109719.1 CDS UM146_03975 NC_017632.1 817816 821097 D COG0457 FOG: TPR repeat; hypothetical protein 817816..821097 Escherichia coli UM146 12699306 YP_006109720.1 CDS UM146_03980 NC_017632.1 821194 822177 D COG1879 ABC-type sugar transport system, periplasmic component; putative sugar transporter subunit: periplasmic-binding component of ABC superfamily protein 821194..822177 Escherichia coli UM146 12699307 YP_006109721.1 CDS UM146_03985 NC_017632.1 822200 823711 D COG1129 ABC-type sugar transport system, ATPase component; fused putative sugar transporter subunits of ABC superfamily: ATP-binding components 822200..823711 Escherichia coli UM146 12699308 YP_006109722.1 CDS UM146_03990 NC_017632.1 823736 824734 D COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; putative sugar transporter subunit: membrane component of ABC superfamily protein 823736..824734 Escherichia coli UM146 12699309 YP_006109723.1 CDS UM146_03995 NC_017632.1 824767 825861 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; hypothetical protein 824767..825861 Escherichia coli UM146 12699310 YP_006109724.1 CDS UM146_04000 NC_017632.1 825873 826745 D COG2017 Galactose mutarotase and related enzymes; aldose 1-epimerase 825873..826745 Escherichia coli UM146 12699311 YP_006109725.1 CDS UM146_04005 NC_017632.1 826905 827327 R COG2259 Predicted membrane protein; hypothetical protein complement(826905..827327) Escherichia coli UM146 12699312 YP_006109726.1 CDS UM146_04010 NC_017632.1 827696 828835 D COG0477 Permeases of the major facilitator superfamily; putative 3-phenylpropionic acid transporter 827696..828835 Escherichia coli UM146 12699313 YP_006109727.1 CDS UM146_04030 NC_017632.1 830302 831156 R COG1073 Hydrolases of the alpha/beta superfamily; putative peptidase complement(830302..831156) Escherichia coli UM146 12699314 YP_006109728.1 CDS UM146_04035 NC_017632.1 831301 832104 R COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; inositol monophosphatase complement(831301..832104) Escherichia coli UM146 12699315 YP_006109729.1 CDS UM146_04040 NC_017632.1 832223 832963 D COG0565 rRNA methylase; putative methyltransferase 832223..832963 Escherichia coli UM146 12699316 YP_006109730.1 CDS UM146_04045 NC_017632.1 833233 833721 D COG1959 Predicted transcriptional regulator; DNA-binding transcriptional regulator IscR 833233..833721 Escherichia coli UM146 12699317 YP_006109731.1 CDS UM146_04050 NC_017632.1 833833 835047 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 833833..835047 Escherichia coli UM146 12699318 YP_006109732.1 CDS UM146_04055 NC_017632.1 835075 835461 D COG0822 NifU homolog involved in Fe-S cluster formation; scaffold protein 835075..835461 Escherichia coli UM146 12699319 YP_006109733.1 CDS iscA NC_017632.1 835478 835801 D COG0316 Uncharacterized conserved protein; iron-sulfur cluster assembly protein 835478..835801 Escherichia coli UM146 12699320 YP_006109734.1 CDS hscB NC_017632.1 835897 836412 D COG1076 DnaJ-domain-containing proteins 1; co-chaperone HscB 835897..836412 Escherichia coli UM146 12699321 YP_006109735.1 CDS hscA NC_017632.1 836429 838279 D COG0443 Molecular chaperone; chaperone protein HscA 836429..838279 Escherichia coli UM146 12699322 YP_006109736.1 CDS UM146_04075 NC_017632.1 838281 838616 D COG0633 Ferredoxin; [2Fe-2S] ferredoxin 838281..838616 Escherichia coli UM146 12699323 YP_006109737.1 CDS UM146_04080 NC_017632.1 838628 838828 D COG2975 Uncharacterized protein conserved in bacteria; hypothetical protein 838628..838828 Escherichia coli UM146 12699324 YP_006109738.1 CDS UM146_04085 NC_017632.1 838887 840170 D COG0260 Leucyl aminopeptidase; aminopeptidase B 838887..840170 Escherichia coli UM146 12699325 YP_006109739.1 CDS UM146_04090 NC_017632.1 840312 841088 D enhanced serine sensitivity protein SseB 840312..841088 Escherichia coli UM146 12699326 YP_006109740.1 CDS sseA NC_017632.1 841582 842427 R COG2897 Rhodanese-related sulfurtransferase; 3-mercaptopyruvate sulfurtransferase complement(841582..842427) Escherichia coli UM146 12699327 YP_006109741.1 CDS UM146_04100 NC_017632.1 842634 847595 D COG2373 Large extracellular alpha-helical protein; hypothetical protein 842634..847595 Escherichia coli UM146 12699328 YP_006109742.1 CDS ndk NC_017632.1 850058 850489 D COG0105 Nucleoside diphosphate kinase; nucleoside diphosphate kinase 850058..850489 Escherichia coli UM146 12699329 YP_006109743.1 CDS UM146_04120 NC_017632.1 850639 851793 D COG0820 Predicted Fe-S-cluster redox enzyme; ribosomal RNA large subunit methyltransferase N 850639..851793 Escherichia coli UM146 12699330 YP_006109744.1 CDS UM146_04125 NC_017632.1 852078 853085 D COG1426 Uncharacterized protein conserved in bacteria; cytoskeletal protein RodZ 852078..853085 Escherichia coli UM146 12699331 YP_006109745.1 CDS ispG NC_017632.1 853112 854230 D COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 853112..854230 Escherichia coli UM146 12699332 YP_006109746.1 CDS hisS NC_017632.1 854341 855615 D COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase 854341..855615 Escherichia coli UM146 12699333 YP_006109747.1 CDS UM146_04140 NC_017632.1 855633 856253 D COG2976 Uncharacterized protein conserved in bacteria; hypothetical protein 855633..856253 Escherichia coli UM146 12699334 YP_006109748.1 CDS UM146_04145 NC_017632.1 856264 857442 D COG1520 FOG: WD40-like repeat; outer membrane protein assembly complex subunit YfgL 856264..857442 Escherichia coli UM146 12699335 YP_006109749.1 CDS engA NC_017632.1 857560 859032 D COG1160 Predicted GTPases; GTP-binding protein EngA 857560..859032 Escherichia coli UM146 12699336 YP_006109750.1 CDS UM146_04155 NC_017632.1 859095 859310 D COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; hypothetical protein 859095..859310 Escherichia coli UM146 12699337 YP_006109751.1 CDS UM146_04160 NC_017632.1 859519 861723 D putative intimin (attaching and effacing protein) or invasin protein (sivH-like) 859519..861723 Escherichia coli UM146 12699338 YP_006109752.1 CDS UM146_04165 NC_017632.1 861778 862755 D SinI-like protein 861778..862755 Escherichia coli UM146 12699339 YP_006109753.1 CDS UM146_04170 NC_017632.1 862876 870927 D hypothetical protein 862876..870927 Escherichia coli UM146 12699340 YP_006109754.1 CDS xseA NC_017632.1 870996 872372 R COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit complement(870996..872372) Escherichia coli UM146 12699341 YP_006109755.1 CDS UM146_04180 NC_017632.1 872534 874000 D COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase 872534..874000 Escherichia coli UM146 12699342 YP_006109756.1 CDS guaA NC_017632.1 874069 875646 D COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase 874069..875646 Escherichia coli UM146 12699343 YP_006109757.1 CDS UM146_04190 NC_017632.1 875740 876279 R hypothetical protein complement(875740..876279) Escherichia coli UM146 12699344 YP_006109758.1 CDS UM146_04195 NC_017632.1 876295 876810 R putative outer membrane lipoprotein complement(876295..876810) Escherichia coli UM146 12699345 YP_006109759.1 CDS UM146_04200 NC_017632.1 877124 877315 R hypothetical protein complement(877124..877315) Escherichia coli UM146 12699346 YP_006109760.1 CDS UM146_04205 NC_017632.1 877333 877485 D hypothetical protein 877333..877485 Escherichia coli UM146 12699347 YP_006109761.1 CDS UM146_04210 NC_017632.1 877667 879910 D COG2199 FOG: GGDEF domain; hypothetical protein 877667..879910 Escherichia coli UM146 12699348 YP_006109762.1 CDS UM146_04215 NC_017632.1 879949 881490 R COG0248 Exopolyphosphatase; exopolyphosphatase complement(879949..881490) Escherichia coli UM146 12699349 YP_006109763.1 CDS UM146_04220 NC_017632.1 881495 883561 R COG0855 Polyphosphate kinase; polyphosphate kinase complement(881495..883561) Escherichia coli UM146 12699350 YP_006109764.1 CDS purN NC_017632.1 883733 884371 R COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; phosphoribosylglycinamide formyltransferase complement(883733..884371) Escherichia coli UM146 12699351 YP_006109765.1 CDS UM146_04230 NC_017632.1 884371 885408 R COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; phosphoribosylaminoimidazole synthetase complement(884371..885408) Escherichia coli UM146 12699352 YP_006109766.1 CDS upp NC_017632.1 885732 886358 D COG0035 Uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 885732..886358 Escherichia coli UM146 12699353 YP_006109767.1 CDS UM146_04240 NC_017632.1 886445 887734 D COG2233 Xanthine/uracil permeases; uracil transporter 886445..887734 Escherichia coli UM146 12699354 YP_006109768.1 CDS UM146_04245 NC_017632.1 887784 888530 D COG0593 ATPase involved in DNA replication initiation; DNA replication initiation factor 887784..888530 Escherichia coli UM146 12699355 YP_006109769.1 CDS UM146_04250 NC_017632.1 888668 889027 R COG1393 Arsenate reductase and related proteins, glutaredoxin family; putative oxidoreductase complement(888668..889027) Escherichia coli UM146 12699356 YP_006109770.1 CDS UM146_04255 NC_017632.1 889048 890511 R COG4783 Putative Zn-dependent protease, contains TPR repeats; putative peptidase complement(889048..890511) Escherichia coli UM146 12699357 YP_006109771.1 CDS UM146_04260 NC_017632.1 890724 891785 D COG0628 Predicted permease; putative permease 890724..891785 Escherichia coli UM146 12699358 YP_006109772.1 CDS bcp NC_017632.1 891884 892354 R COG1225 Peroxiredoxin; thioredoxin-dependent thiol peroxidase complement(891884..892354) Escherichia coli UM146 12699359 YP_006109773.1 CDS gcvR NC_017632.1 892354 892926 R COG2716 Glycine cleavage system regulatory protein; glycine cleavage system transcriptional repressor complement(892354..892926) Escherichia coli UM146 12699360 YP_006109774.1 CDS UM146_04275 NC_017632.1 893071 893949 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase 893071..893949 Escherichia coli UM146 12699361 YP_006109775.1 CDS UM146_04280 NC_017632.1 893966 895000 D COG3317 Uncharacterized lipoprotein; lipoprotein 893966..895000 Escherichia coli UM146 12699362 YP_006109776.1 CDS UM146_04285 NC_017632.1 895213 895926 D COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 895213..895926 Escherichia coli UM146 12699363 YP_006109777.1 CDS UM146_04290 NC_017632.1 896094 896957 D COG2321 Predicted metalloprotease; hypothetical protein 896094..896957 Escherichia coli UM146 12699364 YP_006109778.1 CDS UM146_04295 NC_017632.1 896972 898987 D COG1444 Predicted P-loop ATPase fused to an acetyltransferase; putative hydrolase 896972..898987 Escherichia coli UM146 12699365 YP_006109779.1 CDS UM146_04300 NC_017632.1 899061 899759 D COG0400 Predicted esterase; esterase YpfH 899061..899759 Escherichia coli UM146 12699366 YP_006109780.1 CDS UM146_04305 NC_017632.1 899840 900040 R hypothetical protein complement(899840..900040) Escherichia coli UM146 12699367 YP_006109781.1 CDS UM146_04310 NC_017632.1 900068 901195 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase complement(900068..901195) Escherichia coli UM146 12699368 YP_006109782.1 CDS UM146_04315 NC_017632.1 901199 901555 R COG1393 Arsenate reductase and related proteins, glutaredoxin family; hypothetical protein complement(901199..901555) Escherichia coli UM146 12699369 YP_006109783.1 CDS UM146_04320 NC_017632.1 902094 905207 R COG0841 Cation/multidrug efflux pump; aminoglycoside/multidrug efflux system complement(902094..905207) Escherichia coli UM146 12699370 YP_006109784.1 CDS UM146_04325 NC_017632.1 905371 906546 R COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; nitrate/nitrite sensor protein NarQ complement(905371..906546) Escherichia coli UM146 12699371 YP_006109785.1 CDS UM146_04330 NC_017632.1 906531 907070 R COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; nitrate/nitrite sensor protein NarQ complement(906531..907070) Escherichia coli UM146 12699372 YP_006109786.1 CDS UM146_04335 NC_017632.1 907275 909254 D COG1142 Fe-S-cluster-containing hydrogenase components 2; putative oxidoreductase Fe-S binding subunit 907275..909254 Escherichia coli UM146 12699373 YP_006109787.1 CDS UM146_04340 NC_017632.1 909322 909897 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; putative NUDIX hydrolase 909322..909897 Escherichia coli UM146 12699374 YP_006109788.1 CDS UM146_04345 NC_017632.1 910076 911065 D COG1088 dTDP-D-glucose 4,6-dehydratase; hypothetical protein 910076..911065 Escherichia coli UM146 12699375 YP_006109789.1 CDS UM146_04350 NC_017632.1 911142 913145 R COG0021 Transketolase; transketolase complement(911142..913145) Escherichia coli UM146 12699376 YP_006109790.1 CDS UM146_04355 NC_017632.1 913165 914115 R COG0176 Transaldolase; transaldolase A complement(913165..914115) Escherichia coli UM146 12699377 YP_006109791.1 CDS UM146_04360 NC_017632.1 914404 916683 D COG0281 Malic enzyme; malic enzyme 914404..916683 Escherichia coli UM146 12699378 YP_006109792.1 CDS UM146_04365 NC_017632.1 916976 917311 D COG4810 Ethanolamine utilization protein; putative carboxysome-like ethanolaminosome structural protein with putative role in ethanol utilization 916976..917311 Escherichia coli UM146 12699379 YP_006109793.1 CDS UM146_04370 NC_017632.1 917324 917803 D COG4917 Ethanolamine utilization protein; ethanolamine utilization protein, EutP 917324..917803 Escherichia coli UM146 12699380 YP_006109794.1 CDS UM146_04375 NC_017632.1 917778 918479 D COG4766 Ethanolamine utilization protein; ethanolamine utilization protein EutQ 917778..918479 Escherichia coli UM146 12699381 YP_006109795.1 CDS UM146_04380 NC_017632.1 918476 919279 D COG4812 Ethanolamine utilization cobalamin adenosyltransferase; ethanolamine utilization cobalamin adenosyltransferase 918476..919279 Escherichia coli UM146 12699382 YP_006109796.1 CDS eutD NC_017632.1 919276 920292 D COG0280 Phosphotransacetylase; phosphotransacetylase 919276..920292 Escherichia coli UM146 12699383 YP_006109797.1 CDS UM146_04390 NC_017632.1 920331 920624 D COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; Detox protein 920331..920624 Escherichia coli UM146 12699384 YP_006109798.1 CDS UM146_04395 NC_017632.1 920731 921018 D COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; putative carboxysome structural protein 920731..921018 Escherichia coli UM146 12699385 YP_006109799.1 CDS UM146_04400 NC_017632.1 921030 922433 D COG1012 NAD-dependent aldehyde dehydrogenases; putative aldehyde dehydrogenase, ethanolamine utilization protein 921030..922433 Escherichia coli UM146 12699386 YP_006109800.1 CDS UM146_04405 NC_017632.1 922444 923280 D COG4820 Ethanolamine utilization protein, possible chaperonin; ethanolamine utilization protein EutJ 922444..923280 Escherichia coli UM146 12699387 YP_006109801.1 CDS UM146_04410 NC_017632.1 923270 924457 D COG1454 Alcohol dehydrogenase, class IV; putative alcohol dehydrogenase in ethanolamine utilization 923270..924457 Escherichia coli UM146 12699388 YP_006109802.1 CDS UM146_04415 NC_017632.1 924674 925900 D COG3192 Ethanolamine utilization protein; ethanolamine utilization protein EutH 924674..925900 Escherichia coli UM146 12699389 YP_006109803.1 CDS eutA NC_017632.1 925897 927300 D COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition; reactivating factor for ethanolamine ammonia lyase 925897..927300 Escherichia coli UM146 12699390 YP_006109804.1 CDS UM146_04425 NC_017632.1 927312 928673 D COG4303 Ethanolamine ammonia-lyase, large subunit; ethanolamine ammonia lyase large subunit 927312..928673 Escherichia coli UM146 12699391 YP_006109805.1 CDS UM146_04430 NC_017632.1 928694 929581 D COG4302 Ethanolamine ammonia-lyase, small subunit; ethanolamine ammonia-lyase small subunit 928694..929581 Escherichia coli UM146 12699392 YP_006109806.1 CDS UM146_04435 NC_017632.1 929591 930250 D COG4816 Ethanolamine utilization protein; ethanolamine utilization protein EutL 929591..930250 Escherichia coli UM146 12699393 YP_006109807.1 CDS UM146_04440 NC_017632.1 930263 930763 D COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; putative ethanolaminosome structural protein with putative role in ethanolamine utilization 930263..930763 Escherichia coli UM146 12699394 YP_006109808.1 CDS UM146_04445 NC_017632.1 930809 931861 D COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional regulator EutR 930809..931861 Escherichia coli UM146 12699395 YP_006109809.1 CDS UM146_04450 NC_017632.1 931867 932769 R COG0408 Coproporphyrinogen III oxidase; coproporphyrinogen III oxidase complement(931867..932769) Escherichia coli UM146 12699396 YP_006109810.1 CDS UM146_04455 NC_017632.1 932770 933639 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase I complement(932770..933639) Escherichia coli UM146 12699397 YP_006109811.1 CDS UM146_04460 NC_017632.1 933853 934278 D COG0456 Acetyltransferases; putative acetyltransferase 933853..934278 Escherichia coli UM146 12699398 YP_006109812.1 CDS UM146_04465 NC_017632.1 934265 934714 D hypothetical protein 934265..934714 Escherichia coli UM146 12699399 YP_006109813.1 CDS UM146_04470 NC_017632.1 934750 934890 R hypothetical protein complement(934750..934890) Escherichia coli UM146 12699400 YP_006109814.1 CDS UM146_04475 NC_017632.1 934775 935350 D hypothetical protein 934775..935350 Escherichia coli UM146 12699401 YP_006109815.1 CDS UM146_04480 NC_017632.1 935447 936346 D COG2837 Predicted iron-dependent peroxidase; dyp-type peroxidase family protein 935447..936346 Escherichia coli UM146 12699402 YP_006109816.1 CDS murP NC_017632.1 936524 937948 R COG1264 Phosphotransferase system IIB components; N-acetylmuramic acid phosphotransfer permease complement(936524..937948) Escherichia coli UM146 12699403 YP_006109817.1 CDS murQ NC_017632.1 937952 938848 R COG2103 Predicted sugar phosphate isomerase; N-acetylmuramic acid 6-phosphate etherase complement(937952..938848) Escherichia coli UM146 12699404 YP_006109818.1 CDS UM146_04495 NC_017632.1 939128 939919 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 939128..939919 Escherichia coli UM146 12699405 YP_006109819.1 CDS UM146_04500 NC_017632.1 940077 941093 D COG4150 ABC-type sulfate transport system, periplasmic component; thiosulfate transporter subunit 940077..941093 Escherichia coli UM146 12699406 YP_006109820.1 CDS UM146_04505 NC_017632.1 941093 941926 D COG0555 ABC-type sulfate transport system, permease component; sulfate/thiosulfate transporter subunit 941093..941926 Escherichia coli UM146 12699407 YP_006109821.1 CDS cysW NC_017632.1 941926 942801 D COG4208 ABC-type sulfate transport system, permease component; sulfate/thiosulfate transporter permease subunit 941926..942801 Escherichia coli UM146 12699408 YP_006109822.1 CDS UM146_04515 NC_017632.1 942791 943888 D COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; sulfate/thiosulfate transporter subunit 942791..943888 Escherichia coli UM146 12699409 YP_006109823.1 CDS cysM NC_017632.1 944023 944934 D COG0031 Cysteine synthase; cysteine synthase B 944023..944934 Escherichia coli UM146 12699410 YP_006109824.1 CDS UM146_04525 NC_017632.1 944937 945305 R hypothetical protein complement(944937..945305) Escherichia coli UM146 12699411 YP_006109825.1 CDS pdxK NC_017632.1 945410 946261 D COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxal kinase 945410..946261 Escherichia coli UM146 12699412 YP_006109826.1 CDS UM146_04535 NC_017632.1 946304 946813 R COG2190 Phosphotransferase system IIA components; glucose-specific PTS system component complement(946304..946813) Escherichia coli UM146 12699413 YP_006109827.1 CDS UM146_04540 NC_017632.1 946854 948581 R COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); phosphoenolpyruvate-protein phosphotransferase complement(946854..948581) Escherichia coli UM146 12699414 YP_006109828.1 CDS UM146_04545 NC_017632.1 948626 948883 R COG1925 Phosphotransferase system, HPr-related proteins; phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) complement(948626..948883) Escherichia coli UM146 12699415 YP_006109829.1 CDS UM146_04550 NC_017632.1 949267 950238 R COG0031 Cysteine synthase; cysteine synthase A complement(949267..950238) Escherichia coli UM146 12699416 YP_006109830.1 CDS UM146_04555 NC_017632.1 950423 951184 R COG2981 Uncharacterized protein involved in cysteine biosynthesis; putative sulfate transport protein CysZ complement(950423..951184) Escherichia coli UM146 12699417 YP_006109831.1 CDS UM146_04560 NC_017632.1 951414 952412 D COG3115 Cell division protein; cell division protein ZipA 951414..952412 Escherichia coli UM146 12699418 YP_006109832.1 CDS ligA NC_017632.1 952483 954498 D COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA 952483..954498 Escherichia coli UM146 12699419 YP_006109833.1 CDS UM146_04570 NC_017632.1 954500 954718 D COG3530 Uncharacterized protein conserved in bacteria; hypothetical protein 954500..954718 Escherichia coli UM146 12699420 YP_006109834.1 CDS UM146_04575 NC_017632.1 954715 955713 R COG0385 Predicted Na+-dependent transporter; putative cytochrome oxidase complement(954715..955713) Escherichia coli UM146 12699421 YP_006109835.1 CDS UM146_04580 NC_017632.1 955803 956729 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 955803..956729 Escherichia coli UM146 12699422 YP_006109836.1 CDS UM146_04585 NC_017632.1 956768 957532 R hypothetical protein complement(956768..957532) Escherichia coli UM146 12699423 YP_006109837.1 CDS UM146_04590 NC_017632.1 957781 958614 D COG0005 Purine nucleoside phosphorylase; purine nucleoside phosphorylase 957781..958614 Escherichia coli UM146 12699424 YP_006109838.1 CDS UM146_04595 NC_017632.1 958675 959931 D COG0477 Permeases of the major facilitator superfamily; xanthosine transporter 958675..959931 Escherichia coli UM146 12699425 YP_006109839.1 CDS UM146_04600 NC_017632.1 959984 960142 D hypothetical protein 959984..960142 Escherichia coli UM146 12699426 YP_006109840.1 CDS UM146_04605 NC_017632.1 960183 961067 D COG0583 Transcriptional regulator; DNA-binding transcriptional activator XapR 960183..961067 Escherichia coli UM146 12699427 YP_006109841.1 CDS gltX NC_017632.1 961835 963250 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase 961835..963250 Escherichia coli UM146 12699432 YP_006109842.1 CDS UM146_04615 NC_017632.1 963301 963693 R COG1396 Predicted transcriptional regulators; putative nucleic acid-binding transcriptional regulator complement(963301..963693) Escherichia coli UM146 12699433 YP_006109843.1 CDS UM146_04620 NC_017632.1 963695 964039 R hypothetical protein complement(963695..964039) Escherichia coli UM146 12699434 YP_006109844.1 CDS UM146_04625 NC_017632.1 964672 966861 D COG2199 FOG: GGDEF domain; outer membrane protein 964672..966861 Escherichia coli UM146 12699437 YP_006109845.1 CDS UM146_04630 NC_017632.1 966904 967920 R COG1972 Nucleoside permease; nucleoside (except guanosine) transporter NupC complement(966904..967920) Escherichia coli UM146 12699438 YP_006109846.1 CDS UM146_04635 NC_017632.1 967962 968105 R hypothetical protein complement(967962..968105) Escherichia coli UM146 12699439 YP_006109847.1 CDS UM146_04640 NC_017632.1 968504 969679 D COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; manganese transport protein MntH 968504..969679 Escherichia coli UM146 12699440 YP_006109848.1 CDS UM146_04645 NC_017632.1 969738 969866 R hypothetical protein complement(969738..969866) Escherichia coli UM146 12699441 YP_006109849.1 CDS UM146_04650 NC_017632.1 969820 970146 R hypothetical protein complement(969820..970146) Escherichia coli UM146 12699442 YP_006109850.1 CDS UM146_04655 NC_017632.1 970261 971517 R hypothetical protein complement(970261..971517) Escherichia coli UM146 12699443 YP_006109851.1 CDS glk NC_017632.1 971721 972686 D COG0837 Glucokinase; glucokinase 971721..972686 Escherichia coli UM146 12699444 YP_006109852.1 CDS UM146_04665 NC_017632.1 972905 973231 D COG1445 Phosphotransferase system fructose-specific component IIB; Fructose-like phosphotransferase enzyme IIB component 1 972905..973231 Escherichia coli UM146 12699445 YP_006109853.1 CDS UM146_04670 NC_017632.1 973253 974500 D COG1299 Phosphotransferase system, fructose-specific IIC component; putative enzyme IIC component of PTS 973253..974500 Escherichia coli UM146 12699446 YP_006109854.1 CDS UM146_04675 NC_017632.1 974516 975601 D COG0006 Xaa-Pro aminopeptidase; aminopeptidase 974516..975601 Escherichia coli UM146 12699447 YP_006109855.1 CDS UM146_04680 NC_017632.1 975601 976638 D COG1363 Cellulase M and related proteins; exoaminopeptidase 975601..976638 Escherichia coli UM146 12699448 YP_006109856.1 CDS UM146_04685 NC_017632.1 976663 979158 D COG1925 Phosphotransferase system, HPr-related proteins; putative fused PTS enzymes (multiphosphoryl transfer protein): Hpr component ; enzyme I component ; enzyme IIA component 976663..979158 Escherichia coli UM146 12699449 YP_006109857.1 CDS UM146_04690 NC_017632.1 979161 980018 R COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding protein complement(979161..980018) Escherichia coli UM146 12699450 YP_006109858.1 CDS UM146_04695 NC_017632.1 980031 980768 R COG3279 Response regulator of the LytR/AlgR family; putative response regulator in two-component system with YpdA complement(980031..980768) Escherichia coli UM146 12699451 YP_006109859.1 CDS UM146_04700 NC_017632.1 980783 982462 R COG3275 Putative regulator of cell autolysis; YpdA, sensory kinase in two-component system with YpdB complement(980783..982462) Escherichia coli UM146 12699452 YP_006109860.1 CDS UM146_04705 NC_017632.1 982857 984095 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; aminotransferase 982857..984095 Escherichia coli UM146 12699453 YP_006109861.1 CDS UM146_04710 NC_017632.1 984587 985507 R COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis palmitoleoyl acyltransferase complement(984587..985507) Escherichia coli UM146 12699454 YP_006109862.1 CDS UM146_04715 NC_017632.1 985860 986102 D hypothetical protein 985860..986102 Escherichia coli UM146 12699455 YP_006109863.1 CDS UM146_04720 NC_017632.1 986179 986454 R putative lipoprotein involved in colanic acid biosynthesis complement(986179..986454) Escherichia coli UM146 12699456 YP_006109864.1 CDS UM146_04725 NC_017632.1 986750 987385 D hypothetical protein 986750..987385 Escherichia coli UM146 12699457 YP_006109865.1 CDS UM146_04730 NC_017632.1 987897 989147 D COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; formyl-coenzyme A transferase 987897..989147 Escherichia coli UM146 12699458 YP_006109866.1 CDS UM146_04735 NC_017632.1 989201 990895 D COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; putative oxalyl-CoA decarboxylase 989201..990895 Escherichia coli UM146 12699459 YP_006109867.1 CDS UM146_04740 NC_017632.1 990965 991909 D COG0679 Predicted permeases; putative transporter YfdV 990965..991909 Escherichia coli UM146 12699460 YP_006109868.1 CDS UM146_04745 NC_017632.1 991983 993128 D COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; hypothetical protein 991983..993128 Escherichia coli UM146 12699461 YP_006109869.1 CDS UM146_04750 NC_017632.1 993184 996777 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; hybrid sensory histidine kinase in two-component regulatory system with EvgA complement(993184..996777) Escherichia coli UM146 12699462 YP_006109870.1 CDS UM146_04755 NC_017632.1 996782 997396 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; DNA-binding transcriptional activator EvgA complement(996782..997396) Escherichia coli UM146 12699463 YP_006109871.1 CDS UM146_04760 NC_017632.1 997811 998974 D COG1566 Multidrug resistance efflux pump; EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component 997811..998974 Escherichia coli UM146 12699464 YP_006109872.1 CDS UM146_04765 NC_017632.1 998974 1000512 D COG0477 Permeases of the major facilitator superfamily; putative multidrug efflux system protein Y 998974..1000512 Escherichia coli UM146 12699465 YP_006109873.1 CDS UM146_04770 NC_017632.1 1000620 1001948 R COG3048 D-serine dehydratase; D-serine dehydratase complement(1000620..1001948) Escherichia coli UM146 12699466 YP_006109874.1 CDS UM146_04775 NC_017632.1 1001966 1003303 R COG2610 H+/gluconate symporter and related permeases; permease DsdX complement(1001966..1003303) Escherichia coli UM146 12699467 YP_006109875.1 CDS UM146_04780 NC_017632.1 1003521 1004456 D COG0583 Transcriptional regulator; DNA-binding transcriptional regulator DsdC 1003521..1004456 Escherichia coli UM146 12699468 YP_006109876.1 CDS UM146_04785 NC_017632.1 1004643 1004843 R hypothetical protein complement(1004643..1004843) Escherichia coli UM146 12699469 YP_006109877.1 CDS UM146_04790 NC_017632.1 1005140 1005424 R hypothetical protein complement(1005140..1005424) Escherichia coli UM146 12699470 YP_006109878.1 CDS UM146_04795 NC_017632.1 1005417 1005701 R hypothetical protein complement(1005417..1005701) Escherichia coli UM146 12699471 YP_006109879.1 CDS UM146_04800 NC_017632.1 1005701 1006273 R hypothetical protein complement(1005701..1006273) Escherichia coli UM146 12699472 YP_006109880.1 CDS UM146_04805 NC_017632.1 1006571 1007089 R hypothetical protein complement(1006571..1007089) Escherichia coli UM146 12699473 YP_006109881.1 CDS UM146_04810 NC_017632.1 1007184 1007480 R Anti-RecBCD protein 2 complement(1007184..1007480) Escherichia coli UM146 12699474 YP_006109882.1 CDS UM146_04815 NC_017632.1 1007504 1007887 R hypothetical protein complement(1007504..1007887) Escherichia coli UM146 12699475 YP_006109883.1 CDS UM146_04820 NC_017632.1 1007887 1008492 R DNA single-strand annealing protein; essential recombination function protein Erf complement(1007887..1008492) Escherichia coli UM146 12699476 YP_006109884.1 CDS UM146_04825 NC_017632.1 1008594 1008752 R hypothetical protein complement(1008594..1008752) Escherichia coli UM146 12699477 YP_006109885.1 CDS UM146_04830 NC_017632.1 1008749 1008901 R putative host killing protein complement(1008749..1008901) Escherichia coli UM146 12699478 YP_006109886.1 CDS UM146_04835 NC_017632.1 1008886 1009017 R putative regulatory protein CIII complement(1008886..1009017) Escherichia coli UM146 12699479 YP_006109887.1 CDS UM146_04850 NC_017632.1 1010201 1010623 R Gene 34 protein complement(1010201..1010623) Escherichia coli UM146 12699480 YP_006109888.1 CDS UM146_04855 NC_017632.1 1010681 1010881 R restriction inhibitor protein ral (antirestriction protein) complement(1010681..1010881) Escherichia coli UM146 12699481 YP_006109889.1 CDS UM146_04860 NC_017632.1 1010960 1011259 R regulatory protein N complement(1010960..1011259) Escherichia coli UM146 12699482 YP_006109890.1 CDS UM146_04865 NC_017632.1 1011780 1012430 R COG1396 Predicted transcriptional regulators; Repressor protein CII complement(1011780..1012430) Escherichia coli UM146 12699483 YP_006109891.1 CDS UM146_04870 NC_017632.1 1012511 1012696 D Regulatory protein cro (Antirepressor) 1012511..1012696 Escherichia coli UM146 12699484 YP_006109892.1 CDS UM146_04875 NC_017632.1 1012805 1013098 D Regulatory protein CII 1012805..1013098 Escherichia coli UM146 12699485 YP_006109893.1 CDS UM146_04880 NC_017632.1 1013121 1013393 D hypothetical protein 1013121..1013393 Escherichia coli UM146 12699486 YP_006109894.1 CDS UM146_04885 NC_017632.1 1013456 1014343 D hypothetical protein 1013456..1014343 Escherichia coli UM146 12699487 YP_006109895.1 CDS UM146_04890 NC_017632.1 1014340 1015716 D COG0305 Replicative DNA helicase; replicative DNA helicase 1014340..1015716 Escherichia coli UM146 12699488 YP_006109896.1 CDS UM146_04895 NC_017632.1 1015713 1015811 D hypothetical protein 1015713..1015811 Escherichia coli UM146 12699489 YP_006109897.1 CDS UM146_04900 NC_017632.1 1015991 1016431 D recombination protein ninB from phage origin 1015991..1016431 Escherichia coli UM146 12699490 YP_006109898.1 CDS UM146_04905 NC_017632.1 1016428 1016604 D hypothetical protein 1016428..1016604 Escherichia coli UM146 12699491 YP_006109899.1 CDS UM146_04910 NC_017632.1 1016607 1016954 D hypothetical protein 1016607..1016954 Escherichia coli UM146 12699492 YP_006109900.1 CDS UM146_04915 NC_017632.1 1016947 1017123 D hypothetical protein 1016947..1017123 Escherichia coli UM146 12699493 YP_006109901.1 CDS UM146_04920 NC_017632.1 1017116 1017838 D COG3646 Uncharacterized phage-encoded protein; DNA-binding protein from phage origin 1017116..1017838 Escherichia coli UM146 12699494 YP_006109902.1 CDS UM146_04925 NC_017632.1 1017838 1018128 D hypothetical protein 1017838..1018128 Escherichia coli UM146 12699495 YP_006109903.1 CDS UM146_04930 NC_017632.1 1018125 1018487 D COG4570 Holliday junction resolvase; crossover junction endodeoxyribonuclease 1018125..1018487 Escherichia coli UM146 12699496 YP_006109904.1 CDS UM146_04935 NC_017632.1 1018484 1018672 D NinH protein 1018484..1018672 Escherichia coli UM146 12699497 YP_006109905.1 CDS UM146_04940 NC_017632.1 1018669 1019187 D putative antitermination protein 1018669..1019187 Escherichia coli UM146 12699498 YP_006109906.1 CDS UM146_04945 NC_017632.1 1019784 1020107 D putative holin 1019784..1020107 Escherichia coli UM146 12699499 YP_006109907.1 CDS UM146_04950 NC_017632.1 1020091 1020567 D COG4678 Muramidase (phage lambda lysozyme); Lysozyme (Muramidase) (Endolysin) 1020091..1020567 Escherichia coli UM146 12699500 YP_006109908.1 CDS UM146_04955 NC_017632.1 1020564 1021001 D bacteriophage lysis protein 1020564..1021001 Escherichia coli UM146 12699501 YP_006109909.1 CDS UM146_04960 NC_017632.1 1020998 1021141 D hypothetical protein 1020998..1021141 Escherichia coli UM146 12699502 YP_006109910.1 CDS UM146_04965 NC_017632.1 1021278 1021889 D COG3646 Uncharacterized phage-encoded protein; phage regulatory protein, Rha family 1021278..1021889 Escherichia coli UM146 12699503 YP_006109911.1 CDS UM146_04970 NC_017632.1 1022117 1022359 D hypothetical protein 1022117..1022359 Escherichia coli UM146 12699504 YP_006109912.1 CDS UM146_04975 NC_017632.1 1022362 1022802 D COG2963 Transposase and inactivated derivatives; hypothetical protein 1022362..1022802 Escherichia coli UM146 12699505 YP_006109913.1 CDS UM146_04980 NC_017632.1 1022799 1024214 D COG1783 Phage terminase large subunit; terminase large subunit 1022799..1024214 Escherichia coli UM146 12699506 YP_006109914.1 CDS UM146_04985 NC_017632.1 1024216 1026414 D putative Bacteriophage portal protein 1024216..1026414 Escherichia coli UM146 12699507 YP_006109915.1 CDS UM146_04990 NC_017632.1 1026505 1027398 D putative bacteriophage protein 1026505..1027398 Escherichia coli UM146 12699508 YP_006109916.1 CDS UM146_04995 NC_017632.1 1027417 1028670 D hypothetical protein 1027417..1028670 Escherichia coli UM146 12699509 YP_006109917.1 CDS UM146_05000 NC_017632.1 1028724 1028900 D hypothetical protein 1028724..1028900 Escherichia coli UM146 12699510 YP_006109918.1 CDS UM146_05005 NC_017632.1 1028881 1029342 D putative head DNA stabilization protein 1028881..1029342 Escherichia coli UM146 12699511 YP_006109919.1 CDS UM146_05010 NC_017632.1 1029352 1030770 D Packaged DNA stabilization protein from phage 1029352..1030770 Escherichia coli UM146 12699512 YP_006109920.1 CDS UM146_05015 NC_017632.1 1030770 1031471 D Packaged DNA stabilization protein from phage 1030770..1031471 Escherichia coli UM146 12699513 YP_006109921.1 CDS UM146_05020 NC_017632.1 1031471 1031926 D Head assembly protein 1031471..1031926 Escherichia coli UM146 12699514 YP_006109922.1 CDS UM146_05025 NC_017632.1 1031929 1032621 D DNA transfer protein 1031929..1032621 Escherichia coli UM146 12699515 YP_006109923.1 CDS UM146_05030 NC_017632.1 1032632 1033981 D hypothetical protein 1032632..1033981 Escherichia coli UM146 12699516 YP_006109924.1 CDS UM146_05035 NC_017632.1 1033981 1036140 D injection protein 1033981..1036140 Escherichia coli UM146 12699517 YP_006109925.1 CDS UM146_05040 NC_017632.1 1036141 1036464 R hypothetical protein complement(1036141..1036464) Escherichia coli UM146 12699518 YP_006109926.1 CDS UM146_05045 NC_017632.1 1036487 1036906 R hypothetical protein complement(1036487..1036906) Escherichia coli UM146 12699519 YP_006109927.1 CDS UM146_05050 NC_017632.1 1036891 1037490 R hypothetical protein complement(1036891..1037490) Escherichia coli UM146 12699520 YP_006109928.1 CDS UM146_05055 NC_017632.1 1037533 1037781 R putative transcriptional repressor complement(1037533..1037781) Escherichia coli UM146 12699521 YP_006109929.1 CDS UM146_05060 NC_017632.1 1037805 1038062 R hypothetical protein complement(1037805..1038062) Escherichia coli UM146 12699522 YP_006109930.1 CDS UM146_05065 NC_017632.1 1038168 1038308 D hypothetical protein 1038168..1038308 Escherichia coli UM146 12699523 YP_006109931.1 CDS UM146_05070 NC_017632.1 1038572 1039495 D antirepressor-like protein 1038572..1039495 Escherichia coli UM146 12699524 YP_006109932.1 CDS UM146_05075 NC_017632.1 1039596 1042541 D Endo-alpha-sialidase, phage head protein 1039596..1042541 Escherichia coli UM146 12699525 YP_006109933.1 CDS UM146_05080 NC_017632.1 1043724 1044881 R COG0582 Integrase; CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase complement(1043724..1044881) Escherichia coli UM146 12699526 YP_006109934.1 CDS UM146_05085 NC_017632.1 1045193 1046125 R COG2116 Formate/nitrite family of transporters; hypothetical protein complement(1045193..1046125) Escherichia coli UM146 12699528 YP_006109935.1 CDS UM146_05090 NC_017632.1 1046419 1047174 D COG2853 Surface lipoprotein; lipoprotein 1046419..1047174 Escherichia coli UM146 12699529 YP_006109936.1 CDS UM146_05095 NC_017632.1 1047232 1048572 R COG2067 Long-chain fatty acid transport protein; long-chain fatty acid outer membrane transporter complement(1047232..1048572) Escherichia coli UM146 12699530 YP_006109937.1 CDS UM146_05100 NC_017632.1 1048944 1049228 D COG3691 Uncharacterized protein conserved in bacteria; hypothetical protein 1048944..1049228 Escherichia coli UM146 12699531 YP_006109938.1 CDS fadI NC_017632.1 1049409 1050719 D COG0183 Acetyl-CoA acetyltransferase; 3-ketoacyl-CoA thiolase 1049409..1050719 Escherichia coli UM146 12699532 YP_006109939.1 CDS fadJ NC_017632.1 1050719 1052863 D COG1024 Enoyl-CoA hydratase/carnithine racemase; multifunctional fatty acid oxidation complex subunit alpha 1050719..1052863 Escherichia coli UM146 12699533 YP_006109940.1 CDS UM146_05115 NC_017632.1 1053065 1053550 D COG2062 Phosphohistidine phosphatase SixA; phosphohistidine phosphatase 1053065..1053550 Escherichia coli UM146 12699534 YP_006109941.1 CDS UM146_05120 NC_017632.1 1054115 1054864 D putative fimbrial-like adhesin protein 1054115..1054864 Escherichia coli UM146 12699535 YP_006109942.1 CDS UM146_05125 NC_017632.1 1054738 1057386 D COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein YfcU 1054738..1057386 Escherichia coli UM146 12699536 YP_006109943.1 CDS UM146_05130 NC_017632.1 1057406 1058158 D COG3121 P pilus assembly protein, chaperone PapD; putative periplasmic pilus exported chaperone 1057406..1058158 Escherichia coli UM146 12699537 YP_006109944.1 CDS UM146_05135 NC_017632.1 1058175 1058678 D hypothetical protein 1058175..1058678 Escherichia coli UM146 12699538 YP_006109945.1 CDS UM146_05140 NC_017632.1 1058675 1059154 D putative fimbrial-like adhesin exported protein 1058675..1059154 Escherichia coli UM146 12699539 YP_006109946.1 CDS UM146_05145 NC_017632.1 1059151 1059678 D putative exported fimbrial-like adhesin protein 1059151..1059678 Escherichia coli UM146 12699540 YP_006109947.1 CDS UM146_05150 NC_017632.1 1060145 1060522 D putative fimbrial adhesin YfcO precursor 1060145..1060522 Escherichia coli UM146 12699541 YP_006109948.1 CDS UM146_05155 NC_017632.1 1060842 1061393 R COG2840 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1060842..1061393) Escherichia coli UM146 12699542 YP_006109949.1 CDS UM146_05160 NC_017632.1 1061559 1062491 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1061559..1062491 Escherichia coli UM146 12699543 YP_006109950.1 CDS UM146_05165 NC_017632.1 1062526 1063611 D COG0082 Chorismate synthase; chorismate synthase 1062526..1063611 Escherichia coli UM146 12699544 YP_006109951.1 CDS mepA NC_017632.1 1063615 1064439 D COG3770 Murein endopeptidase; penicillin-insensitive murein endopeptidase 1063615..1064439 Escherichia coli UM146 12699545 YP_006109952.1 CDS UM146_05175 NC_017632.1 1064439 1065248 D COG0730 Predicted permeases; hypothetical protein 1064439..1065248 Escherichia coli UM146 12699546 YP_006109953.1 CDS UM146_05180 NC_017632.1 1065248 1065796 D COG3101 Uncharacterized protein conserved in bacteria; hypothetical protein 1065248..1065796 Escherichia coli UM146 12699547 YP_006109954.1 CDS UM146_05185 NC_017632.1 1065830 1066108 D hypothetical protein 1065830..1066108 Escherichia coli UM146 12699548 YP_006109955.1 CDS mnmC NC_017632.1 1066229 1068235 R COG4121 Uncharacterized conserved protein; 5-methylaminomethyl-2-thiouridine methyltransferase complement(1066229..1068235) Escherichia coli UM146 12699549 YP_006109956.1 CDS UM146_05195 NC_017632.1 1068394 1069614 D COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-ACP synthase 1068394..1069614 Escherichia coli UM146 12699550 YP_006109957.1 CDS UM146_05200 NC_017632.1 1069879 1071057 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 1069879..1071057 Escherichia coli UM146 12699551 YP_006109958.1 CDS flk NC_017632.1 1071054 1072049 R flagella biosynthesis regulator complement(1071054..1072049) Escherichia coli UM146 12699552 YP_006109959.1 CDS UM146_05210 NC_017632.1 1072148 1073284 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; erythronate-4-phosphate dehydrogenase 1072148..1073284 Escherichia coli UM146 12699553 YP_006109960.1 CDS UM146_05215 NC_017632.1 1073350 1074363 D COG0136 Aspartate-semialdehyde dehydrogenase; putative semialdehyde dehydrogenase 1073350..1074363 Escherichia coli UM146 12699554 YP_006109961.1 CDS truA NC_017632.1 1074363 1075175 D COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 1074363..1075175 Escherichia coli UM146 12699555 YP_006109962.1 CDS UM146_05225 NC_017632.1 1075258 1075917 D COG0586 Uncharacterized membrane-associated protein; hypothetical protein 1075258..1075917 Escherichia coli UM146 12699556 YP_006109963.1 CDS UM146_05230 NC_017632.1 1076073 1076987 D COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta 1076073..1076987 Escherichia coli UM146 12699557 YP_006109964.1 CDS UM146_05235 NC_017632.1 1077057 1078325 D COG0285 Folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1077057..1078325 Escherichia coli UM146 12699558 YP_006109965.1 CDS UM146_05240 NC_017632.1 1078315 1078977 D COG3147 Uncharacterized protein conserved in bacteria; hypothetical protein 1078315..1078977 Escherichia coli UM146 12699559 YP_006109966.1 CDS UM146_05245 NC_017632.1 1079509 1079997 D COG1286 Uncharacterized membrane protein, required for colicin V production; colicin V production protein 1079509..1079997 Escherichia coli UM146 12699560 YP_006109967.1 CDS UM146_05250 NC_017632.1 1080034 1081551 D COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; amidophosphoribosyltransferase 1080034..1081551 Escherichia coli UM146 12699561 YP_006109968.1 CDS UM146_05255 NC_017632.1 1081646 1082215 D COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1081646..1082215 Escherichia coli UM146 12699562 YP_006109969.1 CDS UM146_05260 NC_017632.1 1082481 1083263 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; lysine-arginine-ornithine-binding periplasmic protein 1082481..1083263 Escherichia coli UM146 12699563 YP_006109970.1 CDS UM146_05265 NC_017632.1 1083484 1084266 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Histidine-binding periplasmic protein precursor 1083484..1084266 Escherichia coli UM146 12699564 YP_006109971.1 CDS UM146_05270 NC_017632.1 1084356 1085042 D COG4215 ABC-type arginine transport system, permease component; ABC-type arginine transport system permease 1084356..1085042 Escherichia coli UM146 12699565 YP_006109972.1 CDS UM146_05275 NC_017632.1 1085039 1085755 D COG4160 ABC-type arginine/histidine transport system, permease component; histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily protein 1085039..1085755 Escherichia coli UM146 12699566 YP_006109973.1 CDS UM146_05280 NC_017632.1 1085763 1086536 D COG4598 ABC-type histidine transport system, ATPase component; histidine/lysine/arginine/ornithine transporter subunit 1085763..1086536 Escherichia coli UM146 12699567 YP_006109974.1 CDS UM146_05285 NC_017632.1 1086732 1087622 D putative transposase 1086732..1087622 Escherichia coli UM146 12699568 YP_006109975.1 CDS UM146_05290 NC_017632.1 1087670 1088563 R COG1090 Predicted nucleoside-diphosphate sugar epimerase; hypothetical protein complement(1087670..1088563) Escherichia coli UM146 12699569 YP_006109976.1 CDS folX NC_017632.1 1088584 1088946 R COG1539 Dihydroneopterin aldolase; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase complement(1088584..1088946) Escherichia coli UM146 12699570 YP_006109977.1 CDS UM146_05300 NC_017632.1 1089003 1089650 R COG0625 Glutathione S-transferase; glutathione S-transferase complement(1089003..1089650) Escherichia coli UM146 12699571 YP_006109978.1 CDS UM146_05305 NC_017632.1 1089786 1090430 D COG0625 Glutathione S-transferase; glutathione S-transferase 1089786..1090430 Escherichia coli UM146 12699572 YP_006109979.1 CDS UM146_05310 NC_017632.1 1090486 1091037 D COG0622 Predicted phosphoesterase; phosphodiesterase 1090486..1091037 Escherichia coli UM146 12699573 YP_006109980.1 CDS UM146_05315 NC_017632.1 1091095 1091637 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein 1091095..1091637 Escherichia coli UM146 12699574 YP_006109981.1 CDS UM146_05320 NC_017632.1 1091670 1093148 R COG1288 Predicted membrane protein; hypothetical protein complement(1091670..1093148) Escherichia coli UM146 12699575 YP_006109982.1 CDS UM146_05325 NC_017632.1 1093380 1095524 R COG0857 BioD-like N-terminal domain of phosphotransacetylase; phosphate acetyltransferase complement(1093380..1095524) Escherichia coli UM146 12699576 YP_006109983.1 CDS UM146_05330 NC_017632.1 1095599 1096801 R COG0282 Acetate kinase; acetate kinase complement(1095599..1096801) Escherichia coli UM146 12699577 YP_006109984.1 CDS UM146_05335 NC_017632.1 1096939 1097070 D hypothetical protein 1096939..1097070 Escherichia coli UM146 12699578 YP_006109985.1 CDS UM146_05340 NC_017632.1 1097139 1097594 D COG3092 Uncharacterized protein conserved in bacteria; hypothetical protein 1097139..1097594 Escherichia coli UM146 12699579 YP_006109986.1 CDS UM146_05345 NC_017632.1 1097676 1098170 D COG3013 Uncharacterized conserved protein; hypothetical protein 1097676..1098170 Escherichia coli UM146 12699580 YP_006109987.1 CDS UM146_05350 NC_017632.1 1098181 1098831 D COG0637 Predicted phosphatase/phosphohexomutase; putative phosphatase 1098181..1098831 Escherichia coli UM146 12699581 YP_006109988.1 CDS UM146_05355 NC_017632.1 1098918 1100750 D COG0471 Di- and tricarboxylate transporters; putative transport protein 1098918..1100750 Escherichia coli UM146 12699582 YP_006109989.1 CDS UM146_05360 NC_017632.1 1100809 1101408 R COG1896 Predicted hydrolases of HD superfamily; hypothetical protein complement(1100809..1101408) Escherichia coli UM146 12699583 YP_006109990.1 CDS UM146_05365 NC_017632.1 1101492 1102709 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; aminotransferase AlaT complement(1101492..1102709) Escherichia coli UM146 12699584 YP_006109991.1 CDS UM146_05370 NC_017632.1 1103629 1104567 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1103629..1104567 Escherichia coli UM146 12699585 YP_006109992.1 CDS UM146_05375 NC_017632.1 1105196 1105639 D COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH dehydrogenase subunit A 1105196..1105639 Escherichia coli UM146 12699586 YP_006109993.1 CDS UM146_05380 NC_017632.1 1105655 1106317 D COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 1105655..1106317 Escherichia coli UM146 12699587 YP_006109994.1 CDS UM146_05385 NC_017632.1 1106411 1108213 D COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1106411..1108213 Escherichia coli UM146 12699588 YP_006109995.1 CDS UM146_05390 NC_017632.1 1108216 1108716 D COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; NADH dehydrogenase subunit E 1108216..1108716 Escherichia coli UM146 12699589 YP_006109996.1 CDS UM146_05395 NC_017632.1 1108713 1110050 D COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; NADH dehydrogenase I subunit F 1108713..1110050 Escherichia coli UM146 12699590 YP_006109997.1 CDS UM146_05400 NC_017632.1 1110103 1112829 D COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 1110103..1112829 Escherichia coli UM146 12699591 YP_006109998.1 CDS UM146_05405 NC_017632.1 1112826 1113803 D COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH dehydrogenase subunit H 1112826..1113803 Escherichia coli UM146 12699592 YP_006109999.1 CDS UM146_05410 NC_017632.1 1113818 1114360 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 1113818..1114360 Escherichia coli UM146 12699593 YP_006110000.1 CDS UM146_05415 NC_017632.1 1114372 1114926 D COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH dehydrogenase subunit J 1114372..1114926 Escherichia coli UM146 12699594 YP_006110001.1 CDS UM146_05420 NC_017632.1 1114923 1115225 D COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH dehydrogenase subunit K 1114923..1115225 Escherichia coli UM146 12699595 YP_006110002.1 CDS UM146_05425 NC_017632.1 1115222 1117063 D COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH dehydrogenase subunit L 1115222..1117063 Escherichia coli UM146 12699596 YP_006110003.1 CDS UM146_05430 NC_017632.1 1117227 1118756 D COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH dehydrogenase subunit M 1117227..1118756 Escherichia coli UM146 12699597 YP_006110004.1 CDS UM146_05435 NC_017632.1 1118763 1120220 D COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH dehydrogenase subunit N 1118763..1120220 Escherichia coli UM146 12699598 YP_006110005.1 CDS UM146_05440 NC_017632.1 1120286 1120789 R hypothetical protein complement(1120286..1120789) Escherichia coli UM146 12699599 YP_006110006.1 CDS UM146_05445 NC_017632.1 1120892 1121863 R COG2234 Predicted aminopeptidases; putative membrane-associated peptidase complement(1120892..1121863) Escherichia coli UM146 12699600 YP_006110007.1 CDS UM146_05450 NC_017632.1 1122001 1123743 D COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; hypothetical protein 1122001..1123743 Escherichia coli UM146 12699601 YP_006110008.1 CDS UM146_05455 NC_017632.1 1123864 1124781 R COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; ribonuclease Z complement(1123864..1124781) Escherichia coli UM146 12699602 YP_006110009.1 CDS UM146_05460 NC_017632.1 1124846 1125307 D COG2153 Predicted acyltransferase; hypothetical protein 1124846..1125307 Escherichia coli UM146 12699603 YP_006110010.1 CDS UM146_05465 NC_017632.1 1125362 1125667 D COG4575 Uncharacterized conserved protein; hypothetical protein 1125362..1125667 Escherichia coli UM146 12699604 YP_006110011.1 CDS UM146_05470 NC_017632.1 1125746 1127041 D COG1169 Isochorismate synthase; menaquinone-specific isochorismate synthase 1125746..1127041 Escherichia coli UM146 12699605 YP_006110012.1 CDS UM146_05475 NC_017632.1 1127130 1128800 D COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 1127130..1128800 Escherichia coli UM146 12699606 YP_006110013.1 CDS UM146_05480 NC_017632.1 1128797 1129555 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); acyl-CoA thioester hydrolase YfbB 1128797..1129555 Escherichia coli UM146 12699607 YP_006110014.1 CDS UM146_05485 NC_017632.1 1129570 1130427 D COG0447 Dihydroxynaphthoic acid synthase; naphthoate synthase 1129570..1130427 Escherichia coli UM146 12699608 YP_006110015.1 CDS UM146_05490 NC_017632.1 1130427 1131389 D COG1441 O-succinylbenzoate synthase; O-succinylbenzoate synthase 1130427..1131389 Escherichia coli UM146 12699609 YP_006110016.1 CDS UM146_05495 NC_017632.1 1131386 1132741 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; O-succinylbenzoic acid--CoA ligase 1131386..1132741 Escherichia coli UM146 12699610 YP_006110017.1 CDS UM146_05500 NC_017632.1 1132851 1133117 D COG1601 Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain; polymyxin resistance protein B 1132851..1133117 Escherichia coli UM146 12699611 YP_006110018.1 CDS UM146_05505 NC_017632.1 1133111 1133497 R hypothetical protein complement(1133111..1133497) Escherichia coli UM146 12699612 YP_006110019.1 CDS UM146_05510 NC_017632.1 1133497 1133832 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(1133497..1133832) Escherichia coli UM146 12699613 YP_006110020.1 CDS arnT NC_017632.1 1133829 1135481 R COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family; 4-amino-4-deoxy-L-arabinose transferase complement(1133829..1135481) Escherichia coli UM146 12699614 YP_006110021.1 CDS UM146_05520 NC_017632.1 1135481 1136371 R COG0726 Predicted xylanase/chitin deacetylase; hypothetical protein complement(1135481..1136371) Escherichia coli UM146 12699615 YP_006110022.1 CDS UM146_05525 NC_017632.1 1136368 1138350 R COG0223 Methionyl-tRNA formyltransferase; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase complement(1136368..1138350) Escherichia coli UM146 12699616 YP_006110023.1 CDS UM146_05530 NC_017632.1 1138350 1139318 R COG0463 Glycosyltransferases involved in cell wall biogenesis; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase complement(1138350..1139318) Escherichia coli UM146 12699617 YP_006110024.1 CDS UM146_05535 NC_017632.1 1139322 1140479 R COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase complement(1139322..1140479) Escherichia coli UM146 12699618 YP_006110025.1 CDS UM146_05540 NC_017632.1 1140769 1141371 D hypothetical protein 1140769..1141371 Escherichia coli UM146 12699619 YP_006110026.1 CDS UM146_05545 NC_017632.1 1141410 1141835 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; putative NUDIX hydrolase complement(1141410..1141835) Escherichia coli UM146 12699620 YP_006110027.1 CDS UM146_05550 NC_017632.1 1142114 1142656 D hypothetical protein 1142114..1142656 Escherichia coli UM146 12699621 YP_006110028.1 CDS UM146_05555 NC_017632.1 1142756 1143958 D COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; competence damage-inducible protein A 1142756..1143958 Escherichia coli UM146 12699622 YP_006110029.1 CDS UM146_05560 NC_017632.1 1144178 1144960 D COG1414 Transcriptional regulator; putative transcriptional regulator 1144178..1144960 Escherichia coli UM146 12699623 YP_006110030.1 CDS UM146_05565 NC_017632.1 1144975 1146180 D COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; putative epimerase/enolase/dehydratase 1144975..1146180 Escherichia coli UM146 12699624 YP_006110031.1 CDS UM146_05570 NC_017632.1 1146237 1147526 D COG0477 Permeases of the major facilitator superfamily; putative transmembrane transporter YfaV 1146237..1147526 Escherichia coli UM146 12699625 YP_006110032.1 CDS UM146_05575 NC_017632.1 1147544 1148347 D COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; putative aldolase 1147544..1148347 Escherichia coli UM146 12699626 YP_006110033.1 CDS UM146_05580 NC_017632.1 1148388 1148573 R COG5464 Uncharacterized conserved protein; hypothetical protein complement(1148388..1148573) Escherichia coli UM146 12699627 YP_006110034.1 CDS UM146_05585 NC_017632.1 1148586 1149545 R COG5464 Uncharacterized conserved protein; hypothetical protein complement(1148586..1149545) Escherichia coli UM146 12699628 YP_006110035.1 CDS UM146_05590 NC_017632.1 1149588 1149713 R hypothetical protein complement(1149588..1149713) Escherichia coli UM146 12699629 YP_006110036.1 CDS glpC NC_017632.1 1149738 1150928 R COG0247 Fe-S oxidoreductase; sn-glycerol-3-phosphate dehydrogenase subunit C complement(1149738..1150928) Escherichia coli UM146 12699630 YP_006110037.1 CDS UM146_05600 NC_017632.1 1150925 1152184 R COG3075 Anaerobic glycerol-3-phosphate dehydrogenase; anaerobic glycerol-3-phosphate dehydrogenase subunit B complement(1150925..1152184) Escherichia coli UM146 12699631 YP_006110038.1 CDS glpA NC_017632.1 1152174 1153802 R COG0578 Glycerol-3-phosphate dehydrogenase; sn-glycerol-3-phosphate dehydrogenase subunit A complement(1152174..1153802) Escherichia coli UM146 12699632 YP_006110039.1 CDS glpT NC_017632.1 1154075 1155433 D COG2271 Sugar phosphate permease; sn-glycerol-3-phosphate transporter 1154075..1155433 Escherichia coli UM146 12699633 YP_006110040.1 CDS glpQ NC_017632.1 1155438 1156514 D COG0584 Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase 1155438..1156514 Escherichia coli UM146 12699634 YP_006110041.1 CDS UM146_05620 NC_017632.1 1156717 1157367 D hypothetical protein 1156717..1157367 Escherichia coli UM146 12699635 YP_006110042.1 CDS UM146_05625 NC_017632.1 1157421 1157675 R COG0633 Ferredoxin; 2Fe-2S ferredoxin complement(1157421..1157675) Escherichia coli UM146 12699636 YP_006110043.1 CDS nrdB NC_017632.1 1157675 1158844 R COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta complement(1157675..1158844) Escherichia coli UM146 12699637 YP_006110044.1 CDS UM146_05635 NC_017632.1 1158952 1161237 R COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha complement(1158952..1161237) Escherichia coli UM146 12699638 YP_006110045.1 CDS UM146_05640 NC_017632.1 1161967 1165677 D COG3468 Type V secretory pathway, adhesin AidA; adhesin 1161967..1165677 Escherichia coli UM146 12699639 YP_006110046.1 CDS UM146_05645 NC_017632.1 1165817 1166539 R COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase; 3-demethylubiquinone-9 3-methyltransferase complement(1165817..1166539) Escherichia coli UM146 12699640 YP_006110047.1 CDS UM146_05650 NC_017632.1 1166686 1169313 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 1166686..1169313 Escherichia coli UM146 12699641 YP_006110048.1 CDS UM146_05655 NC_017632.1 1169462 1171150 D COG4685 Uncharacterized protein conserved in bacteria; hypothetical protein 1169462..1171150 Escherichia coli UM146 12699642 YP_006110049.1 CDS UM146_05660 NC_017632.1 1171147 1171770 D COG3234 Uncharacterized protein conserved in bacteria; hypothetical protein 1171147..1171770 Escherichia coli UM146 12699643 YP_006110050.1 CDS UM146_05665 NC_017632.1 1171704 1176308 D COG2373 Large extracellular alpha-helical protein; alpha-2-macroglobulin family protein 1171704..1176308 Escherichia coli UM146 12699644 YP_006110051.1 CDS UM146_05670 NC_017632.1 1176309 1177958 D COG5445 Predicted secreted protein; hypothetical protein 1176309..1177958 Escherichia coli UM146 12699645 YP_006110052.1 CDS UM146_05675 NC_017632.1 1177963 1178739 D COG4676 Uncharacterized protein conserved in bacteria; hypothetical protein 1177963..1178739 Escherichia coli UM146 12699646 YP_006110053.1 CDS UM146_05680 NC_017632.1 1178813 1179997 R COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase complement(1178813..1179997) Escherichia coli UM146 12699647 YP_006110054.1 CDS UM146_05685 NC_017632.1 1180028 1181350 R COG2031 Short chain fatty acids transporter; short chain fatty acid transporter complement(1180028..1181350) Escherichia coli UM146 12699648 YP_006110055.1 CDS UM146_05690 NC_017632.1 1181347 1181997 R COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; acetyl-CoA:acetoacetyl-CoA transferase subunit beta complement(1181347..1181997) Escherichia coli UM146 12699649 YP_006110056.1 CDS UM146_05695 NC_017632.1 1181997 1182659 R COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; acetyl-CoA:acetoacetyl-CoA transferase subunit alpha complement(1181997..1182659) Escherichia coli UM146 12699650 YP_006110057.1 CDS UM146_05700 NC_017632.1 1182855 1184240 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; acetoacetate metabolism regulatory protein AtoC complement(1182855..1184240) Escherichia coli UM146 12699651 YP_006110058.1 CDS UM146_05705 NC_017632.1 1184237 1186063 R COG0642 Signal transduction histidine kinase; sensory histidine kinase AtoS complement(1184237..1186063) Escherichia coli UM146 12699652 YP_006110059.1 CDS UM146_05710 NC_017632.1 1186230 1189079 D COG0642 Signal transduction histidine kinase; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 1186230..1189079 Escherichia coli UM146 12699653 YP_006110060.1 CDS UM146_05715 NC_017632.1 1189279 1189929 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator RcsB complement(1189279..1189929) Escherichia coli UM146 12699654 YP_006110061.1 CDS UM146_05720 NC_017632.1 1189946 1192618 R COG0642 Signal transduction histidine kinase; phosphotransfer intermediate protein in two-component regulatory system with RcsBC complement(1189946..1192618) Escherichia coli UM146 12699655 YP_006110062.1 CDS UM146_05725 NC_017632.1 1193356 1194447 D COG3203 Outer membrane protein (porin); outer membrane porin protein C 1193356..1194447 Escherichia coli UM146 12699656 YP_006110063.1 CDS UM146_05730 NC_017632.1 1194559 1195614 D COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; thiamine biosynthesis lipoprotein ApbE 1194559..1195614 Escherichia coli UM146 12699657 YP_006110064.1 CDS UM146_05735 NC_017632.1 1195688 1196752 D COG2169 Adenosine deaminase; bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase 1195688..1196752 Escherichia coli UM146 12699658 YP_006110065.1 CDS UM146_05740 NC_017632.1 1196752 1197402 D COG3145 Alkylated DNA repair protein; 2OG-Fe(II) oxygenase 1196752..1197402 Escherichia coli UM146 12699659 YP_006110066.1 CDS UM146_05745 NC_017632.1 1197478 1199121 D COG4615 ABC-type siderophore export system, fused ATPase and permease components; multidrug transporter membrane protein/ATP-binding component 1197478..1199121 Escherichia coli UM146 12699660 YP_006110067.1 CDS UM146_05750 NC_017632.1 1199339 1200985 D COG0579 Predicted dehydrogenase; malate:quinone oxidoreductase 1199339..1200985 Escherichia coli UM146 12699661 YP_006110068.1 CDS UM146_05755 NC_017632.1 1201135 1201623 R COG4574 Serine protease inhibitor ecotin; ecotin complement(1201135..1201623) Escherichia coli UM146 12699662 YP_006110069.1 CDS UM146_05760 NC_017632.1 1201758 1201922 R hypothetical protein complement(1201758..1201922) Escherichia coli UM146 12699663 YP_006110070.1 CDS UM146_05765 NC_017632.1 1202031 1202525 D COG1145 Ferredoxin; ferredoxin-type protein 1202031..1202525 Escherichia coli UM146 12699664 YP_006110071.1 CDS UM146_05770 NC_017632.1 1202515 1202778 D COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase; assembly protein for periplasmic nitrate reductase 1202515..1202778 Escherichia coli UM146 12699665 YP_006110072.1 CDS UM146_05775 NC_017632.1 1202775 1205261 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; nitrate reductase catalytic subunit 1202775..1205261 Escherichia coli UM146 12699666 YP_006110073.1 CDS napG NC_017632.1 1205268 1205963 D COG1145 Ferredoxin; quinol dehydrogenase periplasmic component 1205268..1205963 Escherichia coli UM146 12699667 YP_006110074.1 CDS napH NC_017632.1 1205950 1206813 D COG0348 Polyferredoxin; quinol dehydrogenase membrane component 1205950..1206813 Escherichia coli UM146 12699668 YP_006110075.1 CDS napB NC_017632.1 1206810 1207259 D COG3043 Nitrate reductase cytochrome c-type subunit; citrate reductase cytochrome c-type subunit 1206810..1207259 Escherichia coli UM146 12699669 YP_006110076.1 CDS UM146_05795 NC_017632.1 1207269 1207871 D COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit; cytochrome c-type protein NapC 1207269..1207871 Escherichia coli UM146 12699670 YP_006110077.1 CDS UM146_05800 NC_017632.1 1207884 1208507 D COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component; cytochrome c biogenesis protein CcmA 1207884..1208507 Escherichia coli UM146 12699671 YP_006110078.1 CDS UM146_05805 NC_017632.1 1208507 1209166 D COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component; Heme exporter protein B 1208507..1209166 Escherichia coli UM146 12699672 YP_006110079.1 CDS UM146_05810 NC_017632.1 1209208 1209945 D COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme exporter protein C 1209208..1209945 Escherichia coli UM146 12699673 YP_006110080.1 CDS UM146_05815 NC_017632.1 1209942 1210151 D COG3114 Heme exporter protein D; cytochrome c biogenesis protein CcmD 1209942..1210151 Escherichia coli UM146 12699674 YP_006110081.1 CDS UM146_05820 NC_017632.1 1210148 1210627 D COG2332 Cytochrome c-type biogenesis protein CcmE; cytochrome c-type biogenesis protein CcmE 1210148..1210627 Escherichia coli UM146 12699675 YP_006110082.1 CDS UM146_05825 NC_017632.1 1210624 1212567 D COG1138 Cytochrome c biogenesis factor; heme lyase, CcmF subunit 1210624..1212567 Escherichia coli UM146 12699676 YP_006110083.1 CDS UM146_05830 NC_017632.1 1212564 1213121 D COG0526 Thiol-disulfide isomerase and thioredoxins; periplasmic thioredoxin of cytochrome c-type biogenesis 1212564..1213121 Escherichia coli UM146 12699677 YP_006110084.1 CDS UM146_05835 NC_017632.1 1213118 1214170 D COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; heme lyase, CcmH subunit 1213118..1214170 Escherichia coli UM146 12699678 YP_006110085.1 CDS UM146_05840 NC_017632.1 1214205 1214852 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator NarP complement(1214205..1214852) Escherichia coli UM146 12699679 YP_006110086.1 CDS UM146_05845 NC_017632.1 1215484 1215969 D autotransporter outer membrane protein 1215484..1215969 Escherichia coli UM146 12699680 YP_006110087.1 CDS UM146_05850 NC_017632.1 1216222 1217982 R COG3083 Predicted hydrolase of alkaline phosphatase superfamily; Inner membrane protein yejM complement(1216222..1217982) Escherichia coli UM146 12699682 YP_006110088.1 CDS UM146_05855 NC_017632.1 1218002 1218229 R COG3082 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1218002..1218229) Escherichia coli UM146 12699683 YP_006110089.1 CDS UM146_05860 NC_017632.1 1218411 1219418 D COG3081 Nucleoid-associated protein; nucleoid-associated protein NdpA 1218411..1219418 Escherichia coli UM146 12699684 YP_006110090.1 CDS UM146_05865 NC_017632.1 1219557 1219841 R COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25 complement(1219557..1219841) Escherichia coli UM146 12699685 YP_006110091.1 CDS UM146_05870 NC_017632.1 1219966 1221726 R COG1061 DNA or RNA helicases of superfamily II; putative nucleic acid ATP-dependent helicase complement(1219966..1221726) Escherichia coli UM146 12699686 YP_006110092.1 CDS UM146_05875 NC_017632.1 1221876 1222571 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 16S rRNA pseudouridylate synthase A 1221876..1222571 Escherichia coli UM146 12699687 YP_006110093.1 CDS UM146_05880 NC_017632.1 1222599 1223789 D COG0477 Permeases of the major facilitator superfamily; bicyclomycin/multidrug efflux system protein 1222599..1223789 Escherichia coli UM146 12699688 YP_006110094.1 CDS UM146_05885 NC_017632.1 1224123 1224467 D hypothetical protein 1224123..1224467 Escherichia coli UM146 12699689 YP_006110095.1 CDS UM146_05890 NC_017632.1 1224471 1226060 R COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components complement(1224471..1226060) Escherichia coli UM146 12699690 YP_006110096.1 CDS UM146_05895 NC_017632.1 1226062 1227087 R COG4239 ABC-type uncharacterized transport system, permease component; putative oligopeptide transporter subunit complement(1226062..1227087) Escherichia coli UM146 12699691 YP_006110097.1 CDS UM146_05900 NC_017632.1 1227087 1228181 R COG4174 ABC-type uncharacterized transport system, permease component; oligopeptide transporter subunit; membrane component of ABC superfamily protein complement(1227087..1228181) Escherichia coli UM146 12699692 YP_006110098.1 CDS UM146_05905 NC_017632.1 1228182 1229996 R COG4166 ABC-type oligopeptide transport system, periplasmic component; putative oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily transporter complement(1228182..1229996) Escherichia coli UM146 12699693 YP_006110099.1 CDS UM146_05910 NC_017632.1 1230078 1231634 R COG2200 FOG: EAL domain; hypothetical protein complement(1230078..1231634) Escherichia coli UM146 12699694 YP_006110100.1 CDS spr NC_017632.1 1231815 1232381 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); putative outer membrane lipoprotein complement(1231815..1232381) Escherichia coli UM146 12699695 YP_006110101.1 CDS UM146_05920 NC_017632.1 1232793 1233506 R COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein complement(1232793..1233506) Escherichia coli UM146 12699696 YP_006110102.1 CDS UM146_05925 NC_017632.1 1233545 1234531 R COG0523 Putative GTPases (G3E family); hypothetical protein complement(1233545..1234531) Escherichia coli UM146 12699697 YP_006110103.1 CDS UM146_05930 NC_017632.1 1234649 1236115 R COG0246 Mannitol-1-phosphate/altronate dehydrogenases; putative sugar dehydrogenase, NAD-dependent complement(1234649..1236115) Escherichia coli UM146 12699698 YP_006110104.1 CDS UM146_05935 NC_017632.1 1236338 1236910 R COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P complement(1236338..1236910) Escherichia coli UM146 12699699 YP_006110105.1 CDS UM146_05940 NC_017632.1 1237065 1237319 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 1237065..1237319 Escherichia coli UM146 12699700 YP_006110106.1 CDS UM146_05945 NC_017632.1 1237316 1238497 R COG0477 Permeases of the major facilitator superfamily; lactose/glucose efflux system complement(1237316..1238497) Escherichia coli UM146 12699701 YP_006110107.1 CDS UM146_05950 NC_017632.1 1238864 1239994 D COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; bifunctional fructose-specific PTS IIA/HPr protein 1238864..1239994 Escherichia coli UM146 12699702 YP_006110108.1 CDS fruK NC_017632.1 1239994 1240932 D COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); 1-phosphofructokinase 1239994..1240932 Escherichia coli UM146 12699703 YP_006110109.1 CDS UM146_05960 NC_017632.1 1240949 1242640 D COG3925 N-terminal domain of the phosphotransferase system fructose-specific component IIB; PTS system fructose-specific transporter subunit IIBC 1240949..1242640 Escherichia coli UM146 12699704 YP_006110110.1 CDS UM146_05965 NC_017632.1 1243096 1244037 D COG0524 Sugar kinases, ribokinase family; hypothetical protein 1243096..1244037 Escherichia coli UM146 12699705 YP_006110111.1 CDS UM146_05970 NC_017632.1 1244138 1244962 D COG2313 Uncharacterized enzyme involved in pigment biosynthesis; indigoidine synthase A family protein 1244138..1244962 Escherichia coli UM146 12699706 YP_006110112.1 CDS UM146_05975 NC_017632.1 1245056 1246306 D COG1972 Nucleoside permease; putative sodium/proton nucleoside transporter 1245056..1246306 Escherichia coli UM146 12699707 YP_006110113.1 CDS UM146_05980 NC_017632.1 1246373 1247071 R COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; DNA-binding transcriptional activator YeiL complement(1246373..1247071) Escherichia coli UM146 12699708 YP_006110114.1 CDS rihB NC_017632.1 1247201 1248142 D COG1957 Inosine-uridine nucleoside N-ribohydrolase; ribonucleoside hydrolase 2 1247201..1248142 Escherichia coli UM146 12699709 YP_006110115.1 CDS UM146_05990 NC_017632.1 1248410 1249498 R COG2771 DNA-binding HTH domain-containing proteins; hypothetical protein complement(1248410..1249498) Escherichia coli UM146 12699710 YP_006110116.1 CDS UM146_05995 NC_017632.1 1249502 1250359 R COG0648 Endonuclease IV; endonuclease IV complement(1249502..1250359) Escherichia coli UM146 12699711 YP_006110117.1 CDS UM146_06000 NC_017632.1 1250433 1251482 R COG2855 Predicted membrane protein; hypothetical protein complement(1250433..1251482) Escherichia coli UM146 12699712 YP_006110118.1 CDS UM146_06005 NC_017632.1 1251581 1252462 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 1251581..1252462 Escherichia coli UM146 12699713 YP_006110119.1 CDS UM146_06010 NC_017632.1 1252667 1254136 D COG0833 Amino acid transporters; lysine transporter 1252667..1254136 Escherichia coli UM146 12699714 YP_006110120.1 CDS UM146_06015 NC_017632.1 1254428 1256419 D COG4771 Outer membrane receptor for ferrienterochelin and colicins; colicin I receptor 1254428..1256419 Escherichia coli UM146 12699715 YP_006110121.1 CDS UM146_06020 NC_017632.1 1256451 1257287 R COG0627 Predicted esterase; S-formylglutathione hydrolase complement(1256451..1257287) Escherichia coli UM146 12699716 YP_006110122.1 CDS folE NC_017632.1 1257545 1258213 D COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 1257545..1258213 Escherichia coli UM146 12699717 YP_006110123.1 CDS UM146_06030 NC_017632.1 1258230 1259387 D COG2311 Predicted membrane protein; hypothetical protein 1258230..1259387 Escherichia coli UM146 12699718 YP_006110124.1 CDS UM146_06035 NC_017632.1 1259529 1260569 D COG1609 Transcriptional regulators; DNA-binding transcriptional regulator GalS 1259529..1260569 Escherichia coli UM146 12699719 YP_006110125.1 CDS UM146_06040 NC_017632.1 1260849 1261847 D COG1879 ABC-type sugar transport system, periplasmic component; galactose-binding transport protein MglB 1260849..1261847 Escherichia coli UM146 12699720 YP_006110126.1 CDS UM146_06045 NC_017632.1 1261908 1263428 D COG1129 ABC-type sugar transport system, ATPase component; galactose/methyl galaxtoside transporter ATP-binding protein 1261908..1263428 Escherichia coli UM146 12699721 YP_006110127.1 CDS mglC NC_017632.1 1263444 1264454 D COG4211 ABC-type glucose/galactose transport system, permease component; beta-methylgalactoside transporter inner membrane protein 1263444..1264454 Escherichia coli UM146 12699722 YP_006110128.1 CDS UM146_06055 NC_017632.1 1264697 1265932 R COG0167 Dihydroorotate dehydrogenase; dihydropyrimidine dehydrogenase complement(1264697..1265932) Escherichia coli UM146 12699723 YP_006110129.1 CDS UM146_06060 NC_017632.1 1265926 1267164 R COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; putative oxidoreductase complement(1265926..1267164) Escherichia coli UM146 12699724 YP_006110130.1 CDS UM146_06065 NC_017632.1 1267358 1267597 R hypothetical protein complement(1267358..1267597) Escherichia coli UM146 12699725 YP_006110131.1 CDS UM146_06070 NC_017632.1 1267600 1268319 R COG2949 Uncharacterized membrane protein; hypothetical protein complement(1267600..1268319) Escherichia coli UM146 12699726 YP_006110132.1 CDS UM146_06075 NC_017632.1 1268469 1269353 R COG0295 Cytidine deaminase; cytidine deaminase complement(1268469..1269353) Escherichia coli UM146 12699727 YP_006110133.1 CDS UM146_06080 NC_017632.1 1269483 1270178 R COG1346 Putative effector of murein hydrolase; hypothetical protein complement(1269483..1270178) Escherichia coli UM146 12699728 YP_006110134.1 CDS UM146_06085 NC_017632.1 1270175 1270573 R COG1380 Putative effector of murein hydrolase LrgA; hypothetical protein complement(1270175..1270573) Escherichia coli UM146 12699729 YP_006110135.1 CDS UM146_06090 NC_017632.1 1270746 1271762 D COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase C 1270746..1271762 Escherichia coli UM146 12699730 YP_006110136.1 CDS UM146_06095 NC_017632.1 1272457 1273893 D COG1538 Outer membrane protein; multidrug resistance outer membrane protein MdtQ 1272457..1273893 Escherichia coli UM146 12699731 YP_006110137.1 CDS UM146_06100 NC_017632.1 1273946 1274707 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); acetoin dehydrogenase 1273946..1274707 Escherichia coli UM146 12699732 YP_006110138.1 CDS UM146_06105 NC_017632.1 1274827 1275405 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(1274827..1275405) Escherichia coli UM146 12699733 YP_006110139.1 CDS UM146_06110 NC_017632.1 1275575 1276162 D hypothetical protein 1275575..1276162 Escherichia coli UM146 12699734 YP_006110140.1 CDS pbpG NC_017632.1 1276336 1277268 D COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine endopeptidase 1276336..1277268 Escherichia coli UM146 12699735 YP_006110141.1 CDS UM146_06120 NC_017632.1 1277307 1279022 R COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase complement(1277307..1279022) Escherichia coli UM146 12699736 YP_006110142.1 CDS UM146_06125 NC_017632.1 1279218 1281515 D COG1472 Beta-glucosidase-related glycosidases; beta-D-glucoside glucohydrolase-like protein 1279218..1281515 Escherichia coli UM146 12699737 YP_006110143.1 CDS UM146_06130 NC_017632.1 1281705 1282622 D COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); putative transporter subunit: periplasmic-binding component of ABC superfamily protein 1281705..1282622 Escherichia coli UM146 12699738 YP_006110144.1 CDS UM146_06135 NC_017632.1 1282629 1283786 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; putative transporter subunit: permease component of ABC superfamily protein 1282629..1283786 Escherichia coli UM146 12699739 YP_006110145.1 CDS UM146_06140 NC_017632.1 1283779 1284705 D COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; putative transporter subunit: ATP-binding component of ABC superfamily transporter 1283779..1284705 Escherichia coli UM146 12699740 YP_006110146.1 CDS UM146_06145 NC_017632.1 1284710 1285441 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; putative transporter subunit: permease component of ABC superfamily transporter 1284710..1285441 Escherichia coli UM146 12699741 YP_006110147.1 CDS UM146_06150 NC_017632.1 1285422 1285529 R hypothetical protein complement(1285422..1285529) Escherichia coli UM146 12699742 YP_006110148.1 CDS UM146_06155 NC_017632.1 1285589 1286320 R COG0789 Predicted transcriptional regulators; HTH-type transcriptional regulator mlrA complement(1285589..1286320) Escherichia coli UM146 12699743 YP_006110149.1 CDS UM146_06160 NC_017632.1 1286542 1288227 D COG3275 Putative regulator of cell autolysis; putative sensory kinase in two-component system with YehT 1286542..1288227 Escherichia coli UM146 12699744 YP_006110150.1 CDS UM146_06165 NC_017632.1 1288224 1288943 D COG3279 Response regulator of the LytR/AlgR family; putative two-component response-regulatory protein YehT 1288224..1288943 Escherichia coli UM146 12699745 YP_006110151.1 CDS UM146_06170 NC_017632.1 1288990 1289460 D COG4807 Uncharacterized protein conserved in bacteria; hypothetical protein 1288990..1289460 Escherichia coli UM146 12699746 YP_006110152.1 CDS UM146_06175 NC_017632.1 1289501 1289962 R COG4808 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1289501..1289962) Escherichia coli UM146 12699747 YP_006110153.1 CDS UM146_06190 NC_017632.1 1292086 1293222 R COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; hypothetical protein complement(1292086..1293222) Escherichia coli UM146 12699748 YP_006110154.1 CDS UM146_06195 NC_017632.1 1293215 1295491 R hypothetical protein complement(1293215..1295491) Escherichia coli UM146 12699749 YP_006110155.1 CDS UM146_06200 NC_017632.1 1295498 1296586 R COG0714 MoxR-like ATPases; putative ATPase complement(1295498..1296586) Escherichia coli UM146 12699750 YP_006110156.1 CDS UM146_06215 NC_017632.1 1301383 1305171 R COG3831 Uncharacterized conserved protein; putative Molybdate metabolism regulator (molR) complement(1301383..1305171) Escherichia coli UM146 12699751 YP_006110157.1 CDS metG NC_017632.1 1305312 1307345 R COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1305312..1307345) Escherichia coli UM146 12699752 YP_006110158.1 CDS UM146_06225 NC_017632.1 1307477 1308586 D COG0489 ATPases involved in chromosome partitioning; putative ATPase 1307477..1308586 Escherichia coli UM146 12699753 YP_006110159.1 CDS UM146_06230 NC_017632.1 1308849 1309130 D hypothetical protein 1308849..1309130 Escherichia coli UM146 12699754 YP_006110160.1 CDS UM146_06235 NC_017632.1 1309423 1309965 D COG3539 P pilus assembly protein, pilin FimA; putative fimbrial-like protein 1309423..1309965 Escherichia coli UM146 12699755 YP_006110161.1 CDS UM146_06240 NC_017632.1 1310046 1310720 D COG3121 P pilus assembly protein, chaperone PapD; putative membrane-associated pilin chaperone 1310046..1310720 Escherichia coli UM146 12699756 YP_006110162.1 CDS UM146_06245 NC_017632.1 1310736 1313216 D COG3188 P pilus assembly protein, porin PapC; hypothetical protein 1310736..1313216 Escherichia coli UM146 12699757 YP_006110163.1 CDS UM146_06250 NC_017632.1 1313232 1314266 D putative exported fimbrial-like adhesin protein 1313232..1314266 Escherichia coli UM146 12699758 YP_006110164.1 CDS UM146_06255 NC_017632.1 1314347 1314685 R COG5455 Predicted integral membrane protein; hypothetical protein complement(1314347..1314685) Escherichia coli UM146 12699759 YP_006110165.1 CDS UM146_06260 NC_017632.1 1314904 1315728 R COG2215 ABC-type uncharacterized transport system, permease component; nickel/cobalt efflux protein RcnA complement(1314904..1315728) Escherichia coli UM146 12699760 YP_006110166.1 CDS UM146_06265 NC_017632.1 1315849 1316121 D COG1937 Uncharacterized protein conserved in bacteria; hypothetical protein 1315849..1316121 Escherichia coli UM146 12699761 YP_006110167.1 CDS UM146_06270 NC_017632.1 1316344 1317132 D COG2145 Hydroxyethylthiazole kinase, sugar kinase family; hydroxyethylthiazole kinase 1316344..1317132 Escherichia coli UM146 12699762 YP_006110168.1 CDS UM146_06275 NC_017632.1 1317129 1317929 D COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 1317129..1317929 Escherichia coli UM146 12699763 YP_006110169.1 CDS UM146_06280 NC_017632.1 1317994 1318812 D COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase); hypothetical protein 1317994..1318812 Escherichia coli UM146 12699764 YP_006110170.1 CDS UM146_06285 NC_017632.1 1318864 1319610 D COG2188 Transcriptional regulators; GntR family transcriptional regulator 1318864..1319610 Escherichia coli UM146 12699765 YP_006110171.1 CDS UM146_06290 NC_017632.1 1319584 1320549 R COG0524 Sugar kinases, ribokinase family; putative kinase complement(1319584..1320549) Escherichia coli UM146 12699766 YP_006110172.1 CDS UM146_06295 NC_017632.1 1320546 1321550 R COG1397 ADP-ribosylglycohydrolase; putative (phospho)hydrolase complement(1320546..1321550) Escherichia coli UM146 12699767 YP_006110173.1 CDS UM146_06300 NC_017632.1 1321547 1322824 R COG0477 Permeases of the major facilitator superfamily; putative hydrophilic substrate transporter; MFS superfamily protein complement(1321547..1322824) Escherichia coli UM146 12699768 YP_006110174.1 CDS UM146_06305 NC_017632.1 1323081 1324133 D COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; fructose-bisphosphate aldolase 1323081..1324133 Escherichia coli UM146 12699769 YP_006110175.1 CDS gatY NC_017632.1 1324362 1325216 D COG0191 Fructose/tagatose bisphosphate aldolase; tagatose-bisphosphate aldolase 1324362..1325216 Escherichia coli UM146 12699770 YP_006110176.1 CDS UM146_06315 NC_017632.1 1325245 1326507 D COG4573 Predicted tagatose 6-phosphate kinase; D-tagatose 1,6-bisphosphate aldolase 2, subunit 1325245..1326507 Escherichia coli UM146 12699771 YP_006110177.1 CDS UM146_06320 NC_017632.1 1326517 1326969 D COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); galactitol-specific PTS system component IIA 1326517..1326969 Escherichia coli UM146 12699772 YP_006110178.1 CDS UM146_06325 NC_017632.1 1327000 1327284 D COG3414 Phosphotransferase system, galactitol-specific IIB component; galactitol-specific PTS system component IIB 1327000..1327284 Escherichia coli UM146 12699773 YP_006110179.1 CDS UM146_06330 NC_017632.1 1327288 1328643 D COG3775 Phosphotransferase system, galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC 1327288..1328643 Escherichia coli UM146 12699774 YP_006110180.1 CDS UM146_06335 NC_017632.1 1328691 1329731 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; galactitol-1-phosphate dehydrogenase 1328691..1329731 Escherichia coli UM146 12699775 YP_006110181.1 CDS UM146_06340 NC_017632.1 1329837 1330610 D COG1349 Transcriptional regulators of sugar metabolism; galactitol utilization operon repressor 1329837..1330610 Escherichia coli UM146 12699776 YP_006110182.1 CDS UM146_06345 NC_017632.1 1330692 1331591 R COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; lipid kinase complement(1330692..1331591) Escherichia coli UM146 12699777 YP_006110183.1 CDS UM146_06350 NC_017632.1 1332007 1332324 D hypothetical protein 1332007..1332324 Escherichia coli UM146 12699778 YP_006110184.1 CDS UM146_06355 NC_017632.1 1332824 1334185 R COG0826 Collagenase and related proteases; putative peptidase complement(1332824..1334185) Escherichia coli UM146 12699779 YP_006110185.1 CDS UM146_06360 NC_017632.1 1334673 1335887 D hypothetical protein 1334673..1335887 Escherichia coli UM146 12699780 YP_006110186.1 CDS UM146_06365 NC_017632.1 1335887 1335997 D hypothetical protein 1335887..1335997 Escherichia coli UM146 12699781 YP_006110187.1 CDS UM146_06370 NC_017632.1 1336108 1336602 D hypothetical protein 1336108..1336602 Escherichia coli UM146 12699782 YP_006110188.1 CDS UM146_06375 NC_017632.1 1336613 1338721 D hypothetical protein 1336613..1338721 Escherichia coli UM146 12699783 YP_006110189.1 CDS UM146_06380 NC_017632.1 1338805 1339386 D hypothetical protein 1338805..1339386 Escherichia coli UM146 12699784 YP_006110190.1 CDS UM146_06385 NC_017632.1 1339511 1339843 R COG3422 Uncharacterized conserved protein; hypothetical protein complement(1339511..1339843) Escherichia coli UM146 12699785 YP_006110191.1 CDS UM146_06390 NC_017632.1 1340023 1340745 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator BaeR complement(1340023..1340745) Escherichia coli UM146 12699786 YP_006110192.1 CDS UM146_06395 NC_017632.1 1340742 1342145 R COG0642 Signal transduction histidine kinase; signal transduction histidine-protein kinase BaeS complement(1340742..1342145) Escherichia coli UM146 12699787 YP_006110193.1 CDS UM146_06400 NC_017632.1 1342142 1343557 R COG0477 Permeases of the major facilitator superfamily; multidrug efflux system protein MdtE complement(1342142..1343557) Escherichia coli UM146 12699788 YP_006110194.1 CDS UM146_06405 NC_017632.1 1343558 1346635 R COG0841 Cation/multidrug efflux pump; multidrug efflux system subunit MdtC complement(1343558..1346635) Escherichia coli UM146 12699789 YP_006110195.1 CDS UM146_06410 NC_017632.1 1346636 1349758 R COG0841 Cation/multidrug efflux pump; multidrug efflux system subunit MdtB complement(1346636..1349758) Escherichia coli UM146 12699790 YP_006110196.1 CDS UM146_06415 NC_017632.1 1349758 1351005 R COG0845 Membrane-fusion protein; multidrug efflux system subunit MdtA complement(1349758..1351005) Escherichia coli UM146 12699791 YP_006110197.1 CDS UM146_06420 NC_017632.1 1351886 1352545 D COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain; von Willebrand factor type A 1351886..1352545 Escherichia coli UM146 12699792 YP_006110198.1 CDS UM146_06425 NC_017632.1 1352542 1353303 D hypothetical protein 1352542..1353303 Escherichia coli UM146 12699793 YP_006110199.1 CDS UM146_06430 NC_017632.1 1353300 1355240 D COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains; hypothetical protein 1353300..1355240 Escherichia coli UM146 12699794 YP_006110200.1 CDS UM146_06435 NC_017632.1 1355253 1356605 R COG0443 Molecular chaperone; putative chaperone complement(1355253..1356605) Escherichia coli UM146 12699795 YP_006110201.1 CDS UM146_06440 NC_017632.1 1356739 1357587 D COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; 3-methyladenine DNA glycosylase 1356739..1357587 Escherichia coli UM146 12699796 YP_006110202.1 CDS UM146_06445 NC_017632.1 1357698 1361015 R COG2202 FOG: PAS/PAC domain; putative sensor protein complement(1357698..1361015) Escherichia coli UM146 12699797 YP_006110203.1 CDS UM146_06450 NC_017632.1 1361333 1361974 D COG0572 Uridine kinase; uridine kinase 1361333..1361974 Escherichia coli UM146 12699798 YP_006110204.1 CDS dcd NC_017632.1 1362066 1362647 D COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase 1362066..1362647 Escherichia coli UM146 12699799 YP_006110205.1 CDS UM146_06460 NC_017632.1 1362669 1364522 D COG2982 Uncharacterized protein involved in outer membrane biogenesis; putative assembly protein 1362669..1364522 Escherichia coli UM146 12699800 YP_006110206.1 CDS UM146_06465 NC_017632.1 1364575 1364865 R COG5606 Uncharacterized conserved small protein; hypothetical protein complement(1364575..1364865) Escherichia coli UM146 12699801 YP_006110207.1 CDS UM146_06470 NC_017632.1 1364855 1365193 R COG4679 Phage-related protein; hypothetical protein complement(1364855..1365193) Escherichia coli UM146 12699802 YP_006110208.1 CDS UM146_06475 NC_017632.1 1365268 1366851 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(1365268..1366851) Escherichia coli UM146 12699803 YP_006110209.1 CDS UM146_06480 NC_017632.1 1367602 1368648 D COG1596 Periplasmic protein involved in polysaccharide export; lipoprotein required for capsular polysaccharide translocation through the outer membrane 1367602..1368648 Escherichia coli UM146 12699804 YP_006110210.1 CDS UM146_06485 NC_017632.1 1368654 1369097 D COG0394 Protein-tyrosine-phosphatase; tyrosine phosphatase 1368654..1369097 Escherichia coli UM146 12699805 YP_006110211.1 CDS UM146_06490 NC_017632.1 1369100 1371262 D COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; tyrosine kinase 1369100..1371262 Escherichia coli UM146 12699806 YP_006110212.1 CDS UM146_06495 NC_017632.1 1371391 1372230 D COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyl transferase 1371391..1372230 Escherichia coli UM146 12699807 YP_006110213.1 CDS UM146_06500 NC_017632.1 1372233 1372721 D COG1045 Serine acetyltransferase; putative colanic acid biosynthesis acetyltransferase WcaB 1372233..1372721 Escherichia coli UM146 12699808 YP_006110214.1 CDS UM146_06505 NC_017632.1 1372718 1373935 D COG0438 Glycosyltransferase; putative glycosyl transferase 1372718..1373935 Escherichia coli UM146 12699809 YP_006110215.1 CDS wcaD NC_017632.1 1373910 1375130 D putative colanic acid biosynthesis protein 1373910..1375130 Escherichia coli UM146 12699810 YP_006110216.1 CDS UM146_06515 NC_017632.1 1375211 1375957 D COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyl transferase 1375211..1375957 Escherichia coli UM146 12699811 YP_006110217.1 CDS UM146_06520 NC_017632.1 1375973 1376521 D COG0110 Acetyltransferase (isoleucine patch superfamily); putative colanic acid biosynthesis acetyltransferase WcaF 1375973..1376521 Escherichia coli UM146 12699812 YP_006110218.1 CDS UM146_06525 NC_017632.1 1376548 1377669 D COG1089 GDP-D-mannose dehydratase; GDP-mannose 4,6-dehydratase 1376548..1377669 Escherichia coli UM146 12699813 YP_006110219.1 CDS UM146_06530 NC_017632.1 1377672 1378637 D COG0451 Nucleoside-diphosphate-sugar epimerases; bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase 1377672..1378637 Escherichia coli UM146 12699814 YP_006110220.1 CDS UM146_06535 NC_017632.1 1378637 1379119 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; GDP-mannose mannosyl hydrolase 1378637..1379119 Escherichia coli UM146 12699815 YP_006110221.1 CDS UM146_06540 NC_017632.1 1379116 1379898 D COG0438 Glycosyltransferase; putative glycosyl transferase 1379116..1379898 Escherichia coli UM146 12699816 YP_006110222.1 CDS UM146_06545 NC_017632.1 1379946 1380338 D COG0438 Glycosyltransferase; putative glycosyl transferase 1379946..1380338 Escherichia coli UM146 12699817 YP_006110223.1 CDS UM146_06550 NC_017632.1 1380341 1381777 D COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase 1380341..1381777 Escherichia coli UM146 12699818 YP_006110224.1 CDS UM146_06555 NC_017632.1 1381970 1383340 D COG1109 Phosphomannomutase; phosphomannomutase 1381970..1383340 Escherichia coli UM146 12699819 YP_006110225.1 CDS UM146_06560 NC_017632.1 1383394 1384788 D COG2148 Sugar transferases involved in lipopolysaccharide synthesis; putative UDP-glucose lipid carrier transferase 1383394..1384788 Escherichia coli UM146 12699820 YP_006110226.1 CDS UM146_06565 NC_017632.1 1384790 1386268 D COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; colanic acid exporter 1384790..1386268 Escherichia coli UM146 12699821 YP_006110227.1 CDS UM146_06570 NC_017632.1 1386931 1388211 D COG2327 Uncharacterized conserved protein; putative pyruvyl transferase 1386931..1388211 Escherichia coli UM146 12699822 YP_006110228.1 CDS UM146_06575 NC_017632.1 1388208 1389428 D COG0438 Glycosyltransferase; putative glycosyl transferase 1388208..1389428 Escherichia coli UM146 12699823 YP_006110229.1 CDS wcaM NC_017632.1 1389439 1390833 D putative colanic acid biosynthesis protein 1389439..1390833 Escherichia coli UM146 12699824 YP_006110230.1 CDS UM146_06585 NC_017632.1 1391008 1391901 D COG1210 UDP-glucose pyrophosphorylase; UTP--glucose-1-phosphate uridylyltransferase subunit GalF 1391008..1391901 Escherichia coli UM146 12699825 YP_006110231.1 CDS UM146_06590 NC_017632.1 1392274 1393359 D COG1088 dTDP-D-glucose 4,6-dehydratase; dTDP-glucose-4,6-dehydratase 1392274..1393359 Escherichia coli UM146 12699826 YP_006110232.1 CDS UM146_06595 NC_017632.1 1393359 1394258 D COG1091 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1393359..1394258 Escherichia coli UM146 12699827 YP_006110233.1 CDS UM146_06600 NC_017632.1 1394316 1395191 D COG1209 dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase 1394316..1395191 Escherichia coli UM146 12699828 YP_006110234.1 CDS UM146_06605 NC_017632.1 1395199 1395756 D COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes; putative dTDP-4-dehydrorhamnose 3,5-epimerase 1395199..1395756 Escherichia coli UM146 12699829 YP_006110235.1 CDS UM146_06620 NC_017632.1 1397056 1397703 D hypothetical protein 1397056..1397703 Escherichia coli UM146 12699830 YP_006110236.1 CDS UM146_06625 NC_017632.1 1398194 1398742 D COG0463 Glycosyltransferases involved in cell wall biogenesis; family 2 glycosyl transferase 1398194..1398742 Escherichia coli UM146 12699831 YP_006110237.1 CDS UM146_06630 NC_017632.1 1398724 1399161 D COG0463 Glycosyltransferases involved in cell wall biogenesis; hypothetical protein 1398724..1399161 Escherichia coli UM146 12699832 YP_006110238.1 CDS UM146_06635 NC_017632.1 1399158 1399904 D COG0463 Glycosyltransferases involved in cell wall biogenesis; LPS biosynthesis glycosyltransferase 1399158..1399904 Escherichia coli UM146 12699833 YP_006110239.1 CDS UM146_06640 NC_017632.1 1399942 1401048 D COG0438 Glycosyltransferase; putative glycosyltransferase 1399942..1401048 Escherichia coli UM146 12699834 YP_006110240.1 CDS UM146_06645 NC_017632.1 1401390 1402493 D COG0438 Glycosyltransferase; putative galactosyltransferase WbgM 1401390..1402493 Escherichia coli UM146 12699835 YP_006110241.1 CDS UM146_06650 NC_017632.1 1402634 1404040 D COG0362 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 1402634..1404040 Escherichia coli UM146 12699836 YP_006110242.1 CDS UM146_06655 NC_017632.1 1404287 1405453 D COG1004 Predicted UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 1404287..1405453 Escherichia coli UM146 12699837 YP_006110243.1 CDS UM146_06660 NC_017632.1 1405599 1406576 D COG3765 Chain length determinant protein; chain length determinant protein 1405599..1406576 Escherichia coli UM146 12699838 YP_006110244.1 CDS UM146_06665 NC_017632.1 1406762 1407373 R COG0139 Phosphoribosyl-AMP cyclohydrolase; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase complement(1406762..1407373) Escherichia coli UM146 12699839 YP_006110245.1 CDS UM146_06670 NC_017632.1 1407367 1408143 R COG0107 Imidazoleglycerol-phosphate synthase; imidazole glycerol phosphate synthase subunit HisF complement(1407367..1408143) Escherichia coli UM146 12699840 YP_006110246.1 CDS UM146_06675 NC_017632.1 1408125 1408862 R COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(1408125..1408862) Escherichia coli UM146 12699841 YP_006110247.1 CDS hisH NC_017632.1 1408862 1409452 R COG0118 Glutamine amidotransferase; imidazole glycerol phosphate synthase subunit HisH complement(1408862..1409452) Escherichia coli UM146 12699842 YP_006110248.1 CDS UM146_06685 NC_017632.1 1409452 1410519 R COG0241 Histidinol phosphatase and related phosphatases; imidazole glycerol-phosphate dehydratase/histidinol phosphatase complement(1409452..1410519) Escherichia coli UM146 12699843 YP_006110249.1 CDS UM146_06690 NC_017632.1 1410519 1411589 R COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; histidinol-phosphate aminotransferase complement(1410519..1411589) Escherichia coli UM146 12699844 YP_006110250.1 CDS hisD NC_017632.1 1411586 1412890 R COG0141 Histidinol dehydrogenase; histidinol dehydrogenase complement(1411586..1412890) Escherichia coli UM146 12699845 YP_006110251.1 CDS hisG NC_017632.1 1412896 1413795 R COG0040 ATP phosphoribosyltransferase; ATP phosphoribosyltransferase complement(1412896..1413795) Escherichia coli UM146 12699846 YP_006110252.1 CDS UM146_06705 NC_017632.1 1414274 1414525 D COG2161 Antitoxin of toxin-antitoxin stability system; antitoxin YefM 1414274..1414525 Escherichia coli UM146 12699847 YP_006110253.1 CDS UM146_06710 NC_017632.1 1414522 1414776 D COG4115 Uncharacterized protein conserved in bacteria; hypothetical protein 1414522..1414776 Escherichia coli UM146 12699848 YP_006110254.1 CDS UM146_06715 NC_017632.1 1414859 1415683 D COG0451 Nucleoside-diphosphate-sugar epimerases; protein YeeZ 1414859..1415683 Escherichia coli UM146 12699849 YP_006110255.1 CDS UM146_06720 NC_017632.1 1415729 1416658 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 1415729..1416658 Escherichia coli UM146 12699850 YP_006110256.1 CDS UM146_06725 NC_017632.1 1416925 1418283 D COG0531 Amino acid transporters; amino acid permease 1416925..1418283 Escherichia coli UM146 12699851 YP_006110257.1 CDS sbcB NC_017632.1 1418357 1419784 R COG2925 Exonuclease I; exonuclease I complement(1418357..1419784) Escherichia coli UM146 12699852 YP_006110258.1 CDS dacD NC_017632.1 1419993 1420184 D COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 1419993..1420184 Escherichia coli UM146 12699853 YP_006110259.1 CDS dacD NC_017632.1 1420193 1421158 D COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 1420193..1421158 Escherichia coli UM146 12699854 YP_006110260.1 CDS UM146_06745 NC_017632.1 1421277 1421750 D COG3449 DNA gyrase inhibitor; DNA gyrase inhibitor 1421277..1421750 Escherichia coli UM146 12699855 YP_006110261.1 CDS UM146_06750 NC_017632.1 1421948 1423006 D COG1289 Predicted membrane protein; inner membrane protein YeeA 1421948..1423006 Escherichia coli UM146 12699856 YP_006110262.1 CDS UM146_06755 NC_017632.1 1423178 1423507 D COG2926 Uncharacterized protein conserved in bacteria; hypothetical protein 1423178..1423507 Escherichia coli UM146 12699857 YP_006110263.1 CDS UM146_06760 NC_017632.1 1423608 1423964 R COG4917 Ethanolamine utilization protein; hypothetical protein complement(1423608..1423964) Escherichia coli UM146 12699858 YP_006110264.1 CDS UM146_06765 NC_017632.1 1424405 1424596 R hypothetical protein complement(1424405..1424596) Escherichia coli UM146 12699859 YP_006110265.1 CDS UM146_06770 NC_017632.1 1424596 1424970 R CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system complement(1424596..1424970) Escherichia coli UM146 12699860 YP_006110266.1 CDS UM146_06775 NC_017632.1 1425059 1425427 R hypothetical protein complement(1425059..1425427) Escherichia coli UM146 12699861 YP_006110267.1 CDS UM146_06780 NC_017632.1 1425501 1425722 R hypothetical protein complement(1425501..1425722) Escherichia coli UM146 12699862 YP_006110268.1 CDS UM146_06785 NC_017632.1 1425791 1426267 R COG2003 DNA repair proteins; putative DNA repair protein complement(1425791..1426267) Escherichia coli UM146 12699863 YP_006110269.1 CDS UM146_06790 NC_017632.1 1426282 1426755 R hypothetical protein complement(1426282..1426755) Escherichia coli UM146 12699864 YP_006110270.1 CDS UM146_06795 NC_017632.1 1427018 1427839 R hypothetical protein complement(1427018..1427839) Escherichia coli UM146 12699865 YP_006110271.1 CDS UM146_06800 NC_017632.1 1428060 1428470 R hypothetical protein complement(1428060..1428470) Escherichia coli UM146 12699866 YP_006110272.1 CDS UM146_06805 NC_017632.1 1428486 1429163 R COG0516 IMP dehydrogenase/GMP reductase; hypothetical protein complement(1428486..1429163) Escherichia coli UM146 12699867 YP_006110273.1 CDS UM146_06810 NC_017632.1 1429299 1430369 R COG1752 Predicted esterase of the alpha-beta hydrolase superfamily; hypothetical protein complement(1429299..1430369) Escherichia coli UM146 12699868 YP_006110274.1 CDS UM146_06815 NC_017632.1 1430366 1431271 R hypothetical protein complement(1430366..1431271) Escherichia coli UM146 12699869 YP_006110275.1 CDS UM146_06820 NC_017632.1 1431268 1433652 R COG0699 Predicted GTPases (dynamin-related); hypothetical protein complement(1431268..1433652) Escherichia coli UM146 12699870 YP_006110276.1 CDS UM146_06825 NC_017632.1 1433870 1434304 R COG3596 Predicted GTPase; hypothetical protein complement(1433870..1434304) Escherichia coli UM146 12699871 YP_006110277.1 CDS UM146_06830 NC_017632.1 1434733 1436898 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor 1434733..1436898 Escherichia coli UM146 12699872 YP_006110278.1 CDS UM146_06835 NC_017632.1 1436909 1437898 D COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron-chelating periplasmic-binding protein 1436909..1437898 Escherichia coli UM146 12699873 YP_006110279.1 CDS UM146_06840 NC_017632.1 1437917 1438975 D COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron ABC transporter 1437917..1438975 Escherichia coli UM146 12699874 YP_006110280.1 CDS UM146_06845 NC_017632.1 1438972 1439739 D COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; putative ABC transporter 1438972..1439739 Escherichia coli UM146 12699875 YP_006110281.1 CDS UM146_06850 NC_017632.1 1439793 1440050 D hypothetical protein 1439793..1440050 Escherichia coli UM146 12699876 YP_006110282.1 CDS UM146_06855 NC_017632.1 1440581 1441726 R hypothetical protein complement(1440581..1441726) Escherichia coli UM146 12699877 YP_006110283.1 CDS UM146_06860 NC_017632.1 1442925 1443197 R COG4584 Transposase and inactivated derivatives; putative transposase subunit complement(1442925..1443197) Escherichia coli UM146 12699878 YP_006110284.1 CDS UM146_06865 NC_017632.1 1443250 1444272 D COG4584 Transposase and inactivated derivatives; putative transposase protein 1443250..1444272 Escherichia coli UM146 12699879 YP_006110285.1 CDS UM146_06870 NC_017632.1 1444272 1445051 D COG1484 DNA replication protein; transposase/IS protein 1444272..1445051 Escherichia coli UM146 12699880 YP_006110286.1 CDS UM146_06875 NC_017632.1 1445067 1445297 D hypothetical protein 1445067..1445297 Escherichia coli UM146 12699881 YP_006110287.1 CDS UM146_06880 NC_017632.1 1446077 1446679 R hypothetical protein complement(1446077..1446679) Escherichia coli UM146 12699882 YP_006110288.1 CDS UM146_06885 NC_017632.1 1446773 1446979 R COG3311 Predicted transcriptional regulator; putative regulatory protein complement(1446773..1446979) Escherichia coli UM146 12699883 YP_006110289.1 CDS UM146_06890 NC_017632.1 1447175 1448371 R COG3547 Transposase and inactivated derivatives; putative transposase complement(1447175..1448371) Escherichia coli UM146 12699884 YP_006110290.1 CDS UM146_06895 NC_017632.1 1448603 1448836 D hypothetical protein 1448603..1448836 Escherichia coli UM146 12699885 YP_006110291.1 CDS UM146_06900 NC_017632.1 1449171 1449311 D hypothetical protein 1449171..1449311 Escherichia coli UM146 12699886 YP_006110292.1 CDS UM146_06905 NC_017632.1 1449551 1449751 R hypothetical protein complement(1449551..1449751) Escherichia coli UM146 12699887 YP_006110293.1 CDS UM146_06910 NC_017632.1 1449951 1450520 D hypothetical protein 1449951..1450520 Escherichia coli UM146 12699888 YP_006110294.1 CDS UM146_06915 NC_017632.1 1450686 1451087 D COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; hypothetical protein 1450686..1451087 Escherichia coli UM146 12699889 YP_006110295.1 CDS UM146_06920 NC_017632.1 1451075 1451485 D hypothetical protein 1451075..1451485 Escherichia coli UM146 12699890 YP_006110296.1 CDS UM146_06925 NC_017632.1 1451769 1452032 D COG3464 Transposase and inactivated derivatives; putative transposase, ISL3 family protein 1451769..1452032 Escherichia coli UM146 12699891 YP_006110297.1 CDS UM146_06930 NC_017632.1 1452780 1453148 D COG3464 Transposase and inactivated derivatives; putative transposase 1452780..1453148 Escherichia coli UM146 12699892 YP_006110298.1 CDS UM146_06935 NC_017632.1 1453227 1453388 D COG3464 Transposase and inactivated derivatives; putative transposase (part) 1453227..1453388 Escherichia coli UM146 12699893 YP_006110299.1 CDS UM146_06940 NC_017632.1 1453498 1453584 D hypothetical protein 1453498..1453584 Escherichia coli UM146 12699894 YP_006110300.1 CDS UM146_06945 NC_017632.1 1453647 1453760 D hypothetical protein 1453647..1453760 Escherichia coli UM146 12699895 YP_006110301.1 CDS UM146_06950 NC_017632.1 1453800 1454834 R COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold; putative phosphotriesterase complement(1453800..1454834) Escherichia coli UM146 12699896 YP_006110302.1 CDS UM146_06955 NC_017632.1 1454837 1455721 R COG3238 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1454837..1455721) Escherichia coli UM146 12699897 YP_006110303.1 CDS UM146_06960 NC_017632.1 1455856 1456614 R COG5426 Uncharacterized membrane protein; hypothetical protein complement(1455856..1456614) Escherichia coli UM146 12699898 YP_006110304.1 CDS UM146_06975 NC_017632.1 1458037 1458153 R COG3436 Transposase and inactivated derivatives; hypothetical protein complement(1458037..1458153) Escherichia coli UM146 12699899 YP_006110305.1 CDS UM146_06980 NC_017632.1 1458217 1459350 D COG3547 Transposase and inactivated derivatives; putative transposase, IS110 family protein 1458217..1459350 Escherichia coli UM146 12699900 YP_006110306.1 CDS UM146_06985 NC_017632.1 1459579 1459776 R hypothetical protein complement(1459579..1459776) Escherichia coli UM146 12699901 YP_006110307.1 CDS UM146_06990 NC_017632.1 1460290 1461063 R hypothetical protein complement(1460290..1461063) Escherichia coli UM146 12699902 YP_006110308.1 CDS UM146_06995 NC_017632.1 1461065 1461589 R COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); hypothetical protein complement(1461065..1461589) Escherichia coli UM146 12699903 YP_006110309.1 CDS UM146_07000 NC_017632.1 1461624 1462820 R COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; putative membrane-associated glycosyltransferase complement(1461624..1462820) Escherichia coli UM146 12699904 YP_006110310.1 CDS UM146_07005 NC_017632.1 1462834 1463487 R COG2120 Uncharacterized proteins, LmbE homologs; hypothetical protein complement(1462834..1463487) Escherichia coli UM146 12699905 YP_006110311.1 CDS UM146_07010 NC_017632.1 1464472 1465758 D COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase; putative phosphoadenosine phosphosulfate reductase 1464472..1465758 Escherichia coli UM146 12699906 YP_006110312.1 CDS UM146_07015 NC_017632.1 1465743 1466387 D COG1475 Predicted transcriptional regulators; hypothetical protein 1465743..1466387 Escherichia coli UM146 12699907 YP_006110313.1 CDS UM146_07020 NC_017632.1 1466642 1466758 R hypothetical protein complement(1466642..1466758) Escherichia coli UM146 12699908 YP_006110314.1 CDS UM146_07025 NC_017632.1 1466758 1468905 R COG1629 Outer membrane receptor proteins, mostly Fe transport; putative outer membrane receptor for iron compound or colicin complement(1466758..1468905) Escherichia coli UM146 12699909 YP_006110315.1 CDS UM146_07030 NC_017632.1 1469948 1470112 D hypothetical protein 1469948..1470112 Escherichia coli UM146 12699910 YP_006110316.1 CDS cobU NC_017632.1 1470577 1471122 D COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1470577..1471122 Escherichia coli UM146 12699911 YP_006110317.1 CDS cobS NC_017632.1 1471119 1471862 D COG0368 Cobalamin-5-phosphate synthase; cobalamin synthase 1471119..1471862 Escherichia coli UM146 12699912 YP_006110318.1 CDS cobT NC_017632.1 1471874 1472953 D COG2038 NaMN:DMB phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1471874..1472953 Escherichia coli UM146 12699913 YP_006110319.1 CDS UM146_07050 NC_017632.1 1473015 1473950 D COG1376 Uncharacterized protein conserved in bacteria; hypothetical protein 1473015..1473950 Escherichia coli UM146 12699914 YP_006110320.1 CDS UM146_07055 NC_017632.1 1474269 1474667 D hypothetical protein 1474269..1474667 Escherichia coli UM146 12699915 YP_006110321.1 CDS UM146_07060 NC_017632.1 1474757 1474984 R COG2801 Transposase and inactivated derivatives; putative transposase complement(1474757..1474984) Escherichia coli UM146 12699916 YP_006110322.1 CDS UM146_07065 NC_017632.1 1474975 1475454 R COG2801 Transposase and inactivated derivatives; hypothetical protein complement(1474975..1475454) Escherichia coli UM146 12699917 YP_006110323.1 CDS UM146_07070 NC_017632.1 1475449 1475562 D hypothetical protein 1475449..1475562 Escherichia coli UM146 12699918 YP_006110324.1 CDS UM146_07075 NC_017632.1 1475559 1475825 R COG2801 Transposase and inactivated derivatives; hypothetical protein complement(1475559..1475825) Escherichia coli UM146 12699919 YP_006110325.1 CDS UM146_07080 NC_017632.1 1476081 1476218 D hypothetical protein 1476081..1476218 Escherichia coli UM146 12699920 YP_006110326.1 CDS UM146_07085 NC_017632.1 1476414 1476704 R COG2091 Phosphopantetheinyl transferase; hypothetical protein complement(1476414..1476704) Escherichia coli UM146 12699921 YP_006110327.1 CDS UM146_07090 NC_017632.1 1476705 1476917 R COG2771 DNA-binding HTH domain-containing proteins; hypothetical protein complement(1476705..1476917) Escherichia coli UM146 12699922 YP_006110328.1 CDS UM146_07095 NC_017632.1 1478027 1486939 D COG1020 Non-ribosomal peptide synthetase modules and related proteins; hypothetical protein 1478027..1486939 Escherichia coli UM146 12699923 YP_006110329.1 CDS UM146_07100 NC_017632.1 1486980 1489580 D COG3321 Polyketide synthase modules and related proteins; hypothetical protein 1486980..1489580 Escherichia coli UM146 12699924 YP_006110330.1 CDS UM146_07115 NC_017632.1 1490488 1490736 D COG0236 Acyl carrier protein; hypothetical protein 1490488..1490736 Escherichia coli UM146 12699925 YP_006110331.1 CDS UM146_07120 NC_017632.1 1490740 1491870 D COG1960 Acyl-CoA dehydrogenases; hypothetical protein 1490740..1491870 Escherichia coli UM146 12699926 YP_006110332.1 CDS UM146_07125 NC_017632.1 1491867 1493135 D COG0331 (acyl-carrier-protein) S-malonyltransferase; hypothetical protein 1491867..1493135 Escherichia coli UM146 12699927 YP_006110333.1 CDS UM146_07130 NC_017632.1 1493183 1497979 D COG1020 Non-ribosomal peptide synthetase modules and related proteins; peptide synthetase protein 1493183..1497979 Escherichia coli UM146 12699928 YP_006110334.1 CDS UM146_07135 NC_017632.1 1498029 1501061 D COG3321 Polyketide synthase modules and related proteins; polyketide synthase protein 1498029..1501061 Escherichia coli UM146 12699929 YP_006110335.1 CDS UM146_07140 NC_017632.1 1501172 1507603 D COG1020 Non-ribosomal peptide synthetase modules and related proteins; putative non-ribosomal peptide synthase 1501172..1507603 Escherichia coli UM146 12699930 YP_006110336.1 CDS UM146_07145 NC_017632.1 1507614 1514078 D COG3321 Polyketide synthase modules and related proteins; hypothetical protein 1507614..1514078 Escherichia coli UM146 12699931 YP_006110337.1 CDS UM146_07150 NC_017632.1 1514071 1515534 D COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; hypothetical protein 1514071..1515534 Escherichia coli UM146 12699932 YP_006110338.1 CDS UM146_07155 NC_017632.1 1515596 1517035 D COG0534 Na+-driven multidrug efflux pump; hypothetical protein 1515596..1517035 Escherichia coli UM146 12699933 YP_006110339.1 CDS UM146_07160 NC_017632.1 1517035 1521399 D COG1020 Non-ribosomal peptide synthetase modules and related proteins; hypothetical protein 1517035..1521399 Escherichia coli UM146 12699934 YP_006110340.1 CDS UM146_07165 NC_017632.1 1521430 1523889 D COG3321 Polyketide synthase modules and related proteins; hypothetical protein 1521430..1523889 Escherichia coli UM146 12699935 YP_006110341.1 CDS UM146_07180 NC_017632.1 1525408 1526130 D COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; putative thioesterase 1525408..1526130 Escherichia coli UM146 12699936 YP_006110342.1 CDS UM146_07185 NC_017632.1 1526165 1526677 D COG4283 Uncharacterized conserved protein; hypothetical protein 1526165..1526677 Escherichia coli UM146 12699937 YP_006110343.1 CDS UM146_07190 NC_017632.1 1526957 1528228 R COG0582 Integrase; bacteriophage integrase complement(1526957..1528228) Escherichia coli UM146 12699938 YP_006110344.1 CDS UM146_07195 NC_017632.1 1528566 1528790 R COG0534 Na+-driven multidrug efflux pump; hypothetical protein complement(1528566..1528790) Escherichia coli UM146 12699940 YP_006110345.1 CDS UM146_07200 NC_017632.1 1528840 1529094 R hypothetical protein complement(1528840..1529094) Escherichia coli UM146 12699941 YP_006110346.1 CDS UM146_07205 NC_017632.1 1529693 1530610 D COG0583 Transcriptional regulator; nitrogen assimilation transcriptional regulator 1529693..1530610 Escherichia coli UM146 12699943 YP_006110347.1 CDS cbl NC_017632.1 1530712 1531662 D COG0583 Transcriptional regulator; transcriptional regulator Cbl 1530712..1531662 Escherichia coli UM146 12699944 YP_006110348.1 CDS UM146_07215 NC_017632.1 1531783 1533420 D COG0534 Na+-driven multidrug efflux pump; hypothetical protein 1531783..1533420 Escherichia coli UM146 12699946 YP_006110349.1 CDS UM146_07220 NC_017632.1 1534048 1534764 R COG0217 Uncharacterized conserved protein; hypothetical protein complement(1534048..1534764) Escherichia coli UM146 12699948 YP_006110350.1 CDS UM146_07225 NC_017632.1 1535107 1536561 R COG0775 Nucleoside phosphorylase; AMP nucleosidase complement(1535107..1536561) Escherichia coli UM146 12699949 YP_006110351.1 CDS UM146_07230 NC_017632.1 1536663 1537979 R COG0477 Permeases of the major facilitator superfamily; shikimate transporter complement(1536663..1537979) Escherichia coli UM146 12699950 YP_006110352.1 CDS UM146_07235 NC_017632.1 1538416 1539345 D COG0859 ADP-heptose:LPS heptosyltransferase; putative ADP-heptose:LPS heptosyl transferase 1538416..1539345 Escherichia coli UM146 12699951 YP_006110353.1 CDS UM146_07250 NC_017632.1 1541467 1541607 R hypothetical protein complement(1541467..1541607) Escherichia coli UM146 12699952 YP_006110354.1 CDS UM146_07255 NC_017632.1 1541564 1542313 R hypothetical protein complement(1541564..1542313) Escherichia coli UM146 12699953 YP_006110355.1 CDS UM146_07260 NC_017632.1 1542964 1544985 R COG1629 Outer membrane receptor proteins, mostly Fe transport; Yersiniabactin/pesticin outer membrane receptor (IRPC) complement(1542964..1544985) Escherichia coli UM146 12699954 YP_006110356.1 CDS UM146_07265 NC_017632.1 1545117 1546694 R COG1021 Peptide arylation enzymes; salicyl-AMP ligase YbtE complement(1545117..1546694) Escherichia coli UM146 12699955 YP_006110357.1 CDS UM146_07270 NC_017632.1 1546698 1547486 R COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; putative siderophore biosynthetic protein complement(1546698..1547486) Escherichia coli UM146 12699956 YP_006110358.1 CDS UM146_07275 NC_017632.1 1547498 1548598 R COG4693 Oxidoreductase (NAD-binding), involved in siderophore biosynthesis; Thiazolinyl-S-HMWP1 reductase YbtU complement(1547498..1548598) Escherichia coli UM146 12699957 YP_006110359.1 CDS UM146_07280 NC_017632.1 1548595 1558086 R COG3321 Polyketide synthase modules and related proteins; yersiniabactin biosynthetic protein complement(1548595..1558086) Escherichia coli UM146 12699958 YP_006110360.1 CDS UM146_07285 NC_017632.1 1558174 1563888 R COG1020 Non-ribosomal peptide synthetase modules and related proteins; High-molecular-weight nonribosomal peptide/polyketide synthetase 2 (HMWP2) complement(1558174..1563888) Escherichia coli UM146 12699959 YP_006110361.1 CDS UM146_07290 NC_017632.1 1563845 1564288 R COG3433 Aryl carrier domain; yersiniabactin biosynthetic protein complement(1563845..1564288) Escherichia coli UM146 12699960 YP_006110362.1 CDS UM146_07295 NC_017632.1 1564479 1565438 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(1564479..1565438) Escherichia coli UM146 12699961 YP_006110363.1 CDS UM146_07300 NC_017632.1 1565695 1567407 D COG1132 ABC-type multidrug transport system, ATPase and permease components; permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtP 1565695..1567407 Escherichia coli UM146 12699962 YP_006110364.1 CDS UM146_07305 NC_017632.1 1567394 1569196 D COG1132 ABC-type multidrug transport system, ATPase and permease components; permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtQ 1567394..1569196 Escherichia coli UM146 12699963 YP_006110365.1 CDS UM146_07310 NC_017632.1 1569189 1570469 D COG0477 Permeases of the major facilitator superfamily; yersiniabactin-iron transporter permease YbtX 1569189..1570469 Escherichia coli UM146 12699964 YP_006110366.1 CDS UM146_07315 NC_017632.1 1570497 1571801 D COG0147 Anthranilate/para-aminobenzoate synthases component I; salicylate synthase Irp9 1570497..1571801 Escherichia coli UM146 12699965 YP_006110367.1 CDS UM146_07320 NC_017632.1 1572076 1573038 R COG0582 Integrase; putative phage integrase complement(1572076..1573038) Escherichia coli UM146 12699966 YP_006110368.1 CDS UM146_07325 NC_017632.1 1573057 1573284 D hypothetical protein 1573057..1573284 Escherichia coli UM146 12699967 YP_006110369.1 CDS UM146_07330 NC_017632.1 1573595 1574392 R COG3228 Uncharacterized protein conserved in bacteria; protein mtfA complement(1573595..1574392) Escherichia coli UM146 12699969 YP_006110370.1 CDS UM146_07335 NC_017632.1 1575245 1575895 R COG3443 Predicted periplasmic or secreted protein; hypothetical protein complement(1575245..1575895) Escherichia coli UM146 12699971 YP_006110371.1 CDS UM146_07340 NC_017632.1 1576152 1576787 R COG2717 Predicted membrane protein; putative sulfite oxidase subunit YedZ complement(1576152..1576787) Escherichia coli UM146 12699972 YP_006110372.1 CDS UM146_07345 NC_017632.1 1576788 1577792 R COG2041 Sulfite oxidase and related enzymes; putative sulfite oxidase subunit YedY complement(1576788..1577792) Escherichia coli UM146 12699973 YP_006110373.1 CDS UM146_07350 NC_017632.1 1577901 1578314 R COG2351 Transthyretin-like protein; hydroxyisourate hydrolase complement(1577901..1578314) Escherichia coli UM146 12699974 YP_006110374.1 CDS UM146_07355 NC_017632.1 1578336 1579118 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulatory protein YedW 1578336..1579118 Escherichia coli UM146 12699975 YP_006110375.1 CDS UM146_07360 NC_017632.1 1579118 1580476 D COG0642 Signal transduction histidine kinase; sensory kinase in two-component regulatory system with YedW 1579118..1580476 Escherichia coli UM146 12699976 YP_006110376.1 CDS UM146_07365 NC_017632.1 1580583 1581434 R COG0693 Putative intracellular protease/amidase; chaperone protein HchA complement(1580583..1581434) Escherichia coli UM146 12699977 YP_006110377.1 CDS UM146_07370 NC_017632.1 1582030 1583145 R COG3203 Outer membrane protein (porin); Outer membrane protein N precursor complement(1582030..1583145) Escherichia coli UM146 12699978 YP_006110378.1 CDS UM146_07375 NC_017632.1 1583711 1584076 D COG0477 Permeases of the major facilitator superfamily; outer membrane protein N 1583711..1584076 Escherichia coli UM146 12699979 YP_006110379.1 CDS UM146_07380 NC_017632.1 1584116 1584811 D COG1418 Predicted HD superfamily hydrolase; hypothetical protein 1584116..1584811 Escherichia coli UM146 12699980 YP_006110380.1 CDS UM146_07385 NC_017632.1 1584878 1586296 D COG0270 Site-specific DNA methylase; DNA cytosine methylase 1584878..1586296 Escherichia coli UM146 12699981 YP_006110381.1 CDS UM146_07390 NC_017632.1 1586277 1586747 D COG3727 DNA G:T-mismatch repair endonuclease; very short patch repair protein 1586277..1586747 Escherichia coli UM146 12699982 YP_006110382.1 CDS UM146_07395 NC_017632.1 1586736 1587656 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(1586736..1587656) Escherichia coli UM146 12699983 YP_006110383.1 CDS UM146_07400 NC_017632.1 1587829 1588746 D COG2354 Uncharacterized protein conserved in bacteria; hypothetical protein 1587829..1588746 Escherichia coli UM146 12699984 YP_006110384.1 CDS UM146_07405 NC_017632.1 1588825 1588920 D hypothetical protein 1588825..1588920 Escherichia coli UM146 12699985 YP_006110385.1 CDS UM146_07410 NC_017632.1 1589196 1590872 D COG2199 FOG: GGDEF domain; putative diguanylate cyclase 1589196..1590872 Escherichia coli UM146 12699986 YP_006110386.1 CDS UM146_07415 NC_017632.1 1590869 1591684 R COG3769 Predicted hydrolase (HAD superfamily); mannosyl-3-phosphoglycerate phosphatase complement(1590869..1591684) Escherichia coli UM146 12699987 YP_006110387.1 CDS UM146_07420 NC_017632.1 1591982 1592209 R hypothetical protein complement(1591982..1592209) Escherichia coli UM146 12699988 YP_006110388.1 CDS UM146_07425 NC_017632.1 1592372 1592560 D hypothetical protein 1592372..1592560 Escherichia coli UM146 12699989 YP_006110389.1 CDS UM146_07430 NC_017632.1 1592604 1593227 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Colanic acid capsular biosynthesis activation protein A complement(1592604..1593227) Escherichia coli UM146 12699990 YP_006110390.1 CDS fliR NC_017632.1 1593517 1594302 R COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR complement(1593517..1594302) Escherichia coli UM146 12699991 YP_006110391.1 CDS fliQ NC_017632.1 1594311 1594580 R COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ complement(1594311..1594580) Escherichia coli UM146 12699992 YP_006110392.1 CDS fliP NC_017632.1 1594590 1595327 R COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP complement(1594590..1595327) Escherichia coli UM146 12699993 YP_006110393.1 CDS UM146_07450 NC_017632.1 1595327 1595692 R COG3190 Flagellar biogenesis protein; flagellar biosynthesis protein FliO complement(1595327..1595692) Escherichia coli UM146 12699994 YP_006110394.1 CDS fliN NC_017632.1 1595695 1596108 R COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein FliN complement(1595695..1596108) Escherichia coli UM146 12699995 YP_006110395.1 CDS fliM NC_017632.1 1596105 1597109 R COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM complement(1596105..1597109) Escherichia coli UM146 12699996 YP_006110396.1 CDS fliL NC_017632.1 1597114 1597578 R COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL complement(1597114..1597578) Escherichia coli UM146 12699997 YP_006110397.1 CDS UM146_07470 NC_017632.1 1597683 1598810 R COG3144 Flagellar hook-length control protein; flagellar hook-length control protein complement(1597683..1598810) Escherichia coli UM146 12699998 YP_006110398.1 CDS fliJ NC_017632.1 1598807 1599250 R COG2882 Flagellar biosynthesis chaperone; flagellar biosynthesis chaperone complement(1598807..1599250) Escherichia coli UM146 12699999 YP_006110399.1 CDS fliI NC_017632.1 1599269 1600642 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase complement(1599269..1600642) Escherichia coli UM146 12700000 YP_006110400.1 CDS fliH NC_017632.1 1600642 1601328 R COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H complement(1600642..1601328) Escherichia coli UM146 12700001 YP_006110401.1 CDS fliG NC_017632.1 1601321 1602316 R COG1536 Flagellar motor switch protein; flagellar motor switch protein G complement(1601321..1602316) Escherichia coli UM146 12700002 YP_006110402.1 CDS fliF NC_017632.1 1602309 1603967 R COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein complement(1602309..1603967) Escherichia coli UM146 12700003 YP_006110403.1 CDS fliE NC_017632.1 1604182 1604496 D COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE 1604182..1604496 Escherichia coli UM146 12700004 YP_006110404.1 CDS emrE NC_017632.1 1604841 1605173 D COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux protein 1604841..1605173 Escherichia coli UM146 12700005 YP_006110405.1 CDS UM146_07510 NC_017632.1 1605341 1605892 D COG1881 Phospholipid-binding protein; putative kinase inhibitor 1605341..1605892 Escherichia coli UM146 12700006 YP_006110406.1 CDS UM146_07515 NC_017632.1 1605902 1606699 D COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator; DLP12 prophage 1605902..1606699 Escherichia coli UM146 12700007 YP_006110407.1 CDS UM146_07520 NC_017632.1 1607201 1608283 R COG3203 Outer membrane protein (porin); outer membrane porin; DLP12 prophage complement(1607201..1608283) Escherichia coli UM146 12700008 YP_006110408.1 CDS UM146_07525 NC_017632.1 1608795 1609463 R COG2135 Uncharacterized conserved protein; hypothetical protein complement(1608795..1609463) Escherichia coli UM146 12700009 YP_006110409.1 CDS UM146_07530 NC_017632.1 1609572 1609805 R COG0425 Predicted redox protein, regulator of disulfide bond formation; hypothetical protein complement(1609572..1609805) Escherichia coli UM146 12700010 YP_006110410.1 CDS UM146_07535 NC_017632.1 1609802 1611007 R COG2391 Predicted transporter component; putative inner membrane protein complement(1609802..1611007) Escherichia coli UM146 12700011 YP_006110411.1 CDS UM146_07540 NC_017632.1 1611194 1611607 D hypothetical protein 1611194..1611607 Escherichia coli UM146 12700012 YP_006110412.1 CDS UM146_07545 NC_017632.1 1611641 1613128 R COG0366 Glycosidases; alpha-amylase complement(1611641..1613128) Escherichia coli UM146 12700013 YP_006110413.1 CDS UM146_07550 NC_017632.1 1613206 1613571 R COG1012 NAD-dependent aldehyde dehydrogenases; flagellar biosynthesis protein FliT complement(1613206..1613571) Escherichia coli UM146 12700014 YP_006110414.1 CDS fliS NC_017632.1 1613571 1613981 R COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS complement(1613571..1613981) Escherichia coli UM146 12700015 YP_006110415.1 CDS fliD NC_017632.1 1614006 1615412 R COG1345 Flagellar capping protein; flagellar capping protein complement(1614006..1615412) Escherichia coli UM146 12700016 YP_006110416.1 CDS UM146_07565 NC_017632.1 1615677 1617434 D COG1344 Flagellin and related hook-associated proteins; flagellin 1615677..1617434 Escherichia coli UM146 12700017 YP_006110417.1 CDS fliA NC_017632.1 1617784 1618473 D COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 1617784..1618473 Escherichia coli UM146 12700018 YP_006110418.1 CDS UM146_07575 NC_017632.1 1618519 1619070 D flagella biosynthesis protein FliZ 1618519..1619070 Escherichia coli UM146 12700019 YP_006110419.1 CDS UM146_07580 NC_017632.1 1619158 1619958 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; cystine transporter subunit 1619158..1619958 Escherichia coli UM146 12700020 YP_006110420.1 CDS UM146_07585 NC_017632.1 1620063 1621049 D COG2515 1-aminocyclopropane-1-carboxylate deaminase; D-cysteine desulfhydrase 1620063..1621049 Escherichia coli UM146 12700021 YP_006110421.1 CDS UM146_07590 NC_017632.1 1621064 1621732 D COG0765 ABC-type amino acid transport system, permease component; putative transporter subunit 1621064..1621732 Escherichia coli UM146 12700022 YP_006110422.1 CDS UM146_07595 NC_017632.1 1621729 1622481 D COG1126 ABC-type polar amino acid transport system, ATPase component; putative amino-acid ABC transporter ATP-binding protein YecC 1621729..1622481 Escherichia coli UM146 12700023 YP_006110423.1 CDS UM146_07600 NC_017632.1 1622711 1623433 D COG2771 DNA-binding HTH domain-containing proteins; DNA-binding transcriptional activator SdiA 1622711..1623433 Escherichia coli UM146 12700024 YP_006110424.1 CDS UM146_07605 NC_017632.1 1623501 1623725 R hypothetical protein complement(1623501..1623725) Escherichia coli UM146 12700025 YP_006110425.1 CDS UM146_07610 NC_017632.1 1624184 1624840 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; response regulator 1624184..1624840 Escherichia coli UM146 12700026 YP_006110426.1 CDS uvrC NC_017632.1 1624837 1626669 D COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 1624837..1626669 Escherichia coli UM146 12700027 YP_006110427.1 CDS UM146_07620 NC_017632.1 1626726 1627274 D COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthetase 1626726..1627274 Escherichia coli UM146 12700028 YP_006110428.1 CDS UM146_07625 NC_017632.1 1627923 1628588 D COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; hypothetical protein 1627923..1628588 Escherichia coli UM146 12700032 YP_006110429.1 CDS UM146_07630 NC_017632.1 1628639 1629373 R COG0814 Amino acid permeases; tyrosine-specific transport protein complement(1628639..1629373) Escherichia coli UM146 12700033 YP_006110430.1 CDS UM146_07635 NC_017632.1 1629373 1629849 R COG0814 Amino acid permeases; tyrosine-specific transport protein complement(1629373..1629849) Escherichia coli UM146 12700034 YP_006110431.1 CDS UM146_07640 NC_017632.1 1630040 1630279 D hypothetical protein 1630040..1630279 Escherichia coli UM146 12700035 YP_006110432.1 CDS UM146_07645 NC_017632.1 1630317 1630814 R COG1528 Ferritin-like protein; ferritin complement(1630317..1630814) Escherichia coli UM146 12700036 YP_006110433.1 CDS UM146_07650 NC_017632.1 1631106 1631282 D hypothetical protein 1631106..1631282 Escherichia coli UM146 12700037 YP_006110434.1 CDS UM146_07655 NC_017632.1 1631774 1632025 D hypothetical protein 1631774..1632025 Escherichia coli UM146 12700038 YP_006110435.1 CDS UM146_07660 NC_017632.1 1632103 1632606 R COG1528 Ferritin-like protein; ferritin-like protein complement(1632103..1632606) Escherichia coli UM146 12700039 YP_006110436.1 CDS UM146_07665 NC_017632.1 1633403 1634392 D COG1879 ABC-type sugar transport system, periplasmic component; L-arabinose-binding periplasmic protein 1633403..1634392 Escherichia coli UM146 12700040 YP_006110437.1 CDS araG NC_017632.1 1634462 1635976 D COG1129 ABC-type sugar transport system, ATPase component; L-arabinose transporter ATP-binding protein 1634462..1635976 Escherichia coli UM146 12700041 YP_006110438.1 CDS araH NC_017632.1 1635991 1636977 D COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; L-arabinose transporter permease 1635991..1636977 Escherichia coli UM146 12700042 YP_006110439.1 CDS UM146_07680 NC_017632.1 1637918 1639342 D COG0380 Trehalose-6-phosphate synthase; trehalose-6-phosphate synthase 1637918..1639342 Escherichia coli UM146 12700043 YP_006110440.1 CDS UM146_07685 NC_017632.1 1639349 1639777 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspC complement(1639349..1639777) Escherichia coli UM146 12700044 YP_006110441.1 CDS UM146_07690 NC_017632.1 1640557 1640907 D transcriptional activator FlhD 1640557..1640907 Escherichia coli UM146 12700045 YP_006110442.1 CDS UM146_07695 NC_017632.1 1640910 1641488 D transcriptional activator FlhC 1640910..1641488 Escherichia coli UM146 12700046 YP_006110443.1 CDS UM146_07700 NC_017632.1 1641615 1642502 D COG1291 Flagellar motor component; flagellar motor protein MotA 1641615..1642502 Escherichia coli UM146 12700047 YP_006110444.1 CDS motB NC_017632.1 1642499 1643425 D COG1360 Flagellar motor protein; flagellar motor protein MotB 1642499..1643425 Escherichia coli UM146 12700048 YP_006110445.1 CDS UM146_07710 NC_017632.1 1643436 1645394 D COG0643 Chemotaxis protein histidine kinase and related kinases; chemotaxis protein CheA 1643436..1645394 Escherichia coli UM146 12700049 YP_006110446.1 CDS UM146_07715 NC_017632.1 1645415 1645918 D COG0835 Chemotaxis signal transduction protein; purine-binding chemotaxis protein 1645415..1645918 Escherichia coli UM146 12700050 YP_006110447.1 CDS UM146_07720 NC_017632.1 1646063 1647724 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein II 1646063..1647724 Escherichia coli UM146 12700051 YP_006110448.1 CDS UM146_07725 NC_017632.1 1647770 1647889 D hypothetical protein 1647770..1647889 Escherichia coli UM146 12700052 YP_006110449.1 CDS UM146_07730 NC_017632.1 1648015 1648875 D COG1352 Methylase of chemotaxis methyl-accepting proteins; chemotaxis methyltransferase CheR 1648015..1648875 Escherichia coli UM146 12700053 YP_006110450.1 CDS UM146_07735 NC_017632.1 1648878 1649927 D COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; chemotaxis-specific methylesterase 1648878..1649927 Escherichia coli UM146 12700054 YP_006110451.1 CDS UM146_07740 NC_017632.1 1649942 1650331 D COG0784 FOG: CheY-like receiver; chemotaxis regulatory protein CheY 1649942..1650331 Escherichia coli UM146 12700055 YP_006110452.1 CDS UM146_07745 NC_017632.1 1650342 1650986 D COG3143 Chemotaxis protein; chemotaxis regulator CheZ 1650342..1650986 Escherichia coli UM146 12700056 YP_006110453.1 CDS UM146_07750 NC_017632.1 1651016 1651162 R hypothetical protein complement(1651016..1651162) Escherichia coli UM146 12700057 YP_006110454.1 CDS flhB NC_017632.1 1651195 1652343 D COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 1651195..1652343 Escherichia coli UM146 12700058 YP_006110455.1 CDS flhA NC_017632.1 1652336 1654414 D COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA 1652336..1654414 Escherichia coli UM146 12700059 YP_006110456.1 CDS UM146_07765 NC_017632.1 1654414 1654806 D flagellar protein FlhE 1654414..1654806 Escherichia coli UM146 12700060 YP_006110457.1 CDS argS NC_017632.1 1654859 1656592 R COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(1654859..1656592) Escherichia coli UM146 12700061 YP_006110458.1 CDS UM146_07775 NC_017632.1 1656626 1656805 D COG0498 Threonine synthase; hypothetical protein 1656626..1656805 Escherichia coli UM146 12700062 YP_006110459.1 CDS UM146_07780 NC_017632.1 1656808 1657374 D COG3102 Uncharacterized protein conserved in bacteria; hypothetical protein 1656808..1657374 Escherichia coli UM146 12700063 YP_006110460.1 CDS UM146_07785 NC_017632.1 1657468 1658133 D COG3142 Uncharacterized protein involved in copper resistance; copper homeostasis protein CutC 1657468..1658133 Escherichia coli UM146 12700064 YP_006110461.1 CDS UM146_07790 NC_017632.1 1658521 1659621 D COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit; TMAO reductase III (TorYZ), cytochrome c-type subunit 1658521..1659621 Escherichia coli UM146 12700065 YP_006110462.1 CDS UM146_07795 NC_017632.1 1659646 1662075 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; trimethylamine N-oxide reductase system III, catalytic subunit 1659646..1662075 Escherichia coli UM146 12700066 YP_006110463.1 CDS UM146_07800 NC_017632.1 1662240 1663211 R COG0500 SAM-dependent methyltransferases; putative S-adenosyl-L-methionine-dependent methyltransferase complement(1662240..1663211) Escherichia coli UM146 12700067 YP_006110464.1 CDS UM146_07805 NC_017632.1 1663208 1663951 R COG0500 SAM-dependent methyltransferases; tRNA (cmo5U34)-methyltransferase complement(1663208..1663951) Escherichia coli UM146 12700068 YP_006110465.1 CDS UM146_07810 NC_017632.1 1663992 1665257 R COG1801 Uncharacterized conserved protein; hypothetical protein complement(1663992..1665257) Escherichia coli UM146 12700069 YP_006110466.1 CDS UM146_07815 NC_017632.1 1665254 1665820 R COG1335 Amidases related to nicotinamidase; hypothetical protein complement(1665254..1665820) Escherichia coli UM146 12700070 YP_006110467.1 CDS aspS NC_017632.1 1666130 1667902 D COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 1666130..1667902 Escherichia coli UM146 12700071 YP_006110468.1 CDS ntpA NC_017632.1 1667904 1668347 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; dATP pyrophosphohydrolase 1667904..1668347 Escherichia coli UM146 12700072 YP_006110469.1 CDS UM146_07830 NC_017632.1 1668376 1669116 D COG0217 Uncharacterized conserved protein; hypothetical protein 1668376..1669116 Escherichia coli UM146 12700073 YP_006110470.1 CDS ruvC NC_017632.1 1669151 1669672 D COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase 1669151..1669672 Escherichia coli UM146 12700074 YP_006110471.1 CDS UM146_07840 NC_017632.1 1669674 1670276 R hypothetical protein complement(1669674..1670276) Escherichia coli UM146 12700075 YP_006110472.1 CDS ruvA NC_017632.1 1670552 1671163 D COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA 1670552..1671163 Escherichia coli UM146 12700076 YP_006110473.1 CDS ruvB NC_017632.1 1671172 1672182 D COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB 1671172..1672182 Escherichia coli UM146 12700077 YP_006110474.1 CDS znuB NC_017632.1 1672399 1673184 R COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; high-affinity zinc transporter membrane protein complement(1672399..1673184) Escherichia coli UM146 12700078 YP_006110475.1 CDS znuC NC_017632.1 1673181 1673936 R COG1121 ABC-type Mn/Zn transport systems, ATPase component; high-affinity zinc transporter ATPase complement(1673181..1673936) Escherichia coli UM146 12700079 YP_006110476.1 CDS znuA NC_017632.1 1673961 1674947 D COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin; high-affinity zinc transporter periplasmic protein 1673961..1674947 Escherichia coli UM146 12700080 YP_006110477.1 CDS UM146_07870 NC_017632.1 1674963 1676285 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 1674963..1676285 Escherichia coli UM146 12700081 YP_006110478.1 CDS UM146_07875 NC_017632.1 1676379 1677374 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1676379..1677374 Escherichia coli UM146 12700082 YP_006110479.1 CDS UM146_07880 NC_017632.1 1677506 1678948 R COG0469 Pyruvate kinase; pyruvate kinase complement(1677506..1678948) Escherichia coli UM146 12700083 YP_006110480.1 CDS UM146_07885 NC_017632.1 1679076 1679945 R COG1737 Transcriptional regulators; DNA-binding transcriptional regulator HexR complement(1679076..1679945) Escherichia coli UM146 12700084 YP_006110481.1 CDS UM146_07890 NC_017632.1 1679968 1680117 D hypothetical protein 1679968..1680117 Escherichia coli UM146 12700085 YP_006110482.1 CDS UM146_07895 NC_017632.1 1680283 1681758 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1680283..1681758 Escherichia coli UM146 12700086 YP_006110483.1 CDS UM146_07900 NC_017632.1 1681993 1683804 D COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase 1681993..1683804 Escherichia coli UM146 12700087 YP_006110484.1 CDS UM146_07905 NC_017632.1 1683841 1684482 D COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 1683841..1684482 Escherichia coli UM146 12700088 YP_006110485.1 CDS purT NC_017632.1 1684538 1685716 R COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase); phosphoribosylglycinamide formyltransferase 2 complement(1684538..1685716) Escherichia coli UM146 12700089 YP_006110486.1 CDS UM146_07915 NC_017632.1 1685850 1686140 D COG3141 Uncharacterized protein conserved in bacteria; DNA damage-inducible protein YebG 1685850..1686140 Escherichia coli UM146 12700090 YP_006110487.1 CDS UM146_07920 NC_017632.1 1686207 1686563 D hypothetical protein 1686207..1686563 Escherichia coli UM146 12700091 YP_006110488.1 CDS UM146_07925 NC_017632.1 1686720 1686830 R hypothetical protein complement(1686720..1686830) Escherichia coli UM146 12700092 YP_006110489.1 CDS UM146_07930 NC_017632.1 1686890 1687549 D COG2979 Uncharacterized protein conserved in bacteria; hypothetical protein 1686890..1687549 Escherichia coli UM146 12700093 YP_006110490.1 CDS UM146_07935 NC_017632.1 1687758 1689818 D COG1770 Protease II; protease 2 1687758..1689818 Escherichia coli UM146 12700094 YP_006110491.1 CDS UM146_07940 NC_017632.1 1689815 1690477 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; exodeoxyribonuclease X complement(1689815..1690477) Escherichia coli UM146 12700095 YP_006110492.1 CDS UM146_07945 NC_017632.1 1690500 1691156 R COG0388 Predicted amidohydrolase; hypothetical protein complement(1690500..1691156) Escherichia coli UM146 12700096 YP_006110493.1 CDS UM146_07950 NC_017632.1 1691258 1691488 R DNA polymerase III subunit theta complement(1691258..1691488) Escherichia coli UM146 12700097 YP_006110494.1 CDS UM146_07955 NC_017632.1 1691627 1692001 D COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC; hypothetical protein 1691627..1692001 Escherichia coli UM146 12700098 YP_006110495.1 CDS UM146_07960 NC_017632.1 1692005 1692877 D COG1276 Putative copper export protein; inner membrane protein yebZ 1692005..1692877 Escherichia coli UM146 12700099 YP_006110496.1 CDS UM146_07965 NC_017632.1 1692890 1693231 D hypothetical protein 1692890..1693231 Escherichia coli UM146 12700100 YP_006110497.1 CDS UM146_07970 NC_017632.1 1693249 1693401 D hypothetical protein 1693249..1693401 Escherichia coli UM146 12700101 YP_006110498.1 CDS pphA NC_017632.1 1693626 1694282 D COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; serine/threonine protein phosphatase 1 1693626..1694282 Escherichia coli UM146 12700102 YP_006110499.1 CDS UM146_07980 NC_017632.1 1694283 1694558 R hypothetical protein complement(1694283..1694558) Escherichia coli UM146 12700103 YP_006110500.1 CDS UM146_07985 NC_017632.1 1694579 1694815 R hypothetical protein complement(1694579..1694815) Escherichia coli UM146 12700104 YP_006110501.1 CDS yebU NC_017632.1 1694933 1696378 R COG0144 tRNA and rRNA cytosine-C5-methylases; rRNA (cytosine-C(5)-)-methyltransferase RsmF complement(1694933..1696378) Escherichia coli UM146 12700105 YP_006110502.1 CDS UM146_07995 NC_017632.1 1696452 1699085 R COG3008 Paraquat-inducible protein B; mce-like protein complement(1696452..1699085) Escherichia coli UM146 12700106 YP_006110503.1 CDS UM146_08000 NC_017632.1 1699054 1700337 R COG2995 Uncharacterized paraquat-inducible protein A; hypothetical protein complement(1699054..1700337) Escherichia coli UM146 12700107 YP_006110504.1 CDS UM146_08005 NC_017632.1 1700467 1700964 D COG1956 GAF domain-containing protein; hypothetical protein 1700467..1700964 Escherichia coli UM146 12700108 YP_006110505.1 CDS UM146_08010 NC_017632.1 1701061 1701759 D COG3109 Activator of osmoprotectant transporter ProP; putative solute/DNA competence effector 1701061..1701759 Escherichia coli UM146 12700109 YP_006110506.1 CDS UM146_08015 NC_017632.1 1701907 1703826 D COG0793 Periplasmic protease; carboxy-terminal protease 1701907..1703826 Escherichia coli UM146 12700110 YP_006110507.1 CDS UM146_08020 NC_017632.1 1704018 1704899 D COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX 1704018..1704899 Escherichia coli UM146 12700111 YP_006110508.1 CDS UM146_08025 NC_017632.1 1704944 1706317 R COG0477 Permeases of the major facilitator superfamily; putative transport protein complement(1704944..1706317) Escherichia coli UM146 12700112 YP_006110509.1 CDS UM146_08030 NC_017632.1 1706494 1707285 D COG1414 Transcriptional regulator; transcriptional regulator KdgR 1706494..1707285 Escherichia coli UM146 12700113 YP_006110510.1 CDS UM146_08035 NC_017632.1 1707429 1707668 R hypothetical protein complement(1707429..1707668) Escherichia coli UM146 12700114 YP_006110511.1 CDS UM146_08040 NC_017632.1 1707827 1707970 D hypothetical protein 1707827..1707970 Escherichia coli UM146 12700115 YP_006110512.1 CDS UM146_08045 NC_017632.1 1708045 1708332 D hypothetical protein 1708045..1708332 Escherichia coli UM146 12700116 YP_006110513.1 CDS UM146_08050 NC_017632.1 1709003 1709146 D hypothetical protein 1709003..1709146 Escherichia coli UM146 12700117 YP_006110514.1 CDS UM146_08055 NC_017632.1 1709159 1709368 D COG1278 Cold shock proteins; cold-shock protein 1709159..1709368 Escherichia coli UM146 12700118 YP_006110515.1 CDS rrmA NC_017632.1 1709534 1710343 D COG0500 SAM-dependent methyltransferases; 23S rRNA methyltransferase A 1709534..1710343 Escherichia coli UM146 12700119 YP_006110516.1 CDS UM146_08065 NC_017632.1 1710340 1710906 R COG1971 Predicted membrane protein; hypothetical protein complement(1710340..1710906) Escherichia coli UM146 12700120 YP_006110517.1 CDS UM146_08070 NC_017632.1 1711335 1711793 R COG4811 Predicted membrane protein; hypothetical protein complement(1711335..1711793) Escherichia coli UM146 12700121 YP_006110518.1 CDS UM146_08075 NC_017632.1 1711848 1712699 R COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; mannose-specific PTS system protein IID complement(1711848..1712699) Escherichia coli UM146 12700122 YP_006110519.1 CDS UM146_08080 NC_017632.1 1712712 1713512 R COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; PTS enzyme IIC, mannose-specific complement(1712712..1713512) Escherichia coli UM146 12700123 YP_006110520.1 CDS UM146_08085 NC_017632.1 1713575 1714546 R COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; fused mannose-specific PTS enzymes: IIA component ; IIB component complement(1713575..1714546) Escherichia coli UM146 12700124 YP_006110521.1 CDS UM146_08090 NC_017632.1 1715009 1716565 D COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein 1715009..1716565 Escherichia coli UM146 12700125 YP_006110522.1 CDS UM146_08095 NC_017632.1 1716569 1718167 R COG2200 FOG: EAL domain; hypothetical protein complement(1716569..1718167) Escherichia coli UM146 12700126 YP_006110523.1 CDS UM146_08100 NC_017632.1 1718298 1719662 R COG1760 L-serine deaminase; L-serine deaminase I complement(1718298..1719662) Escherichia coli UM146 12700127 YP_006110524.1 CDS UM146_08105 NC_017632.1 1719846 1720424 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein complement(1719846..1720424) Escherichia coli UM146 12700128 YP_006110525.1 CDS UM146_08110 NC_017632.1 1720428 1721789 R COG0147 Anthranilate/para-aminobenzoate synthases component I; para-aminobenzoate synthase component I complement(1720428..1721789) Escherichia coli UM146 12700129 YP_006110526.1 CDS UM146_08115 NC_017632.1 1721863 1722042 D COG3140 Uncharacterized protein conserved in bacteria; hypothetical protein 1721863..1722042 Escherichia coli UM146 12700130 YP_006110527.1 CDS UM146_08120 NC_017632.1 1722162 1722461 R hypothetical protein complement(1722162..1722461) Escherichia coli UM146 12700131 YP_006110528.1 CDS UM146_08125 NC_017632.1 1722883 1723230 R COG0251 Putative translation initiation inhibitor, yjgF family; hypothetical protein complement(1722883..1723230) Escherichia coli UM146 12700132 YP_006110529.1 CDS UM146_08130 NC_017632.1 1723359 1725269 D COG1199 Rad3-related DNA helicases; putative ATP-dependent helicase 1723359..1725269 Escherichia coli UM146 12700133 YP_006110530.1 CDS UM146_08135 NC_017632.1 1725327 1726022 D COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; putative peptidase 1725327..1726022 Escherichia coli UM146 12700134 YP_006110531.1 CDS UM146_08140 NC_017632.1 1726062 1726643 D COG3065 Starvation-inducible outer membrane lipoprotein; putative outer membrane protein 1726062..1726643 Escherichia coli UM146 12700135 YP_006110532.1 CDS UM146_08145 NC_017632.1 1726782 1728533 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long-chain-fatty-acid--CoA ligase 1726782..1728533 Escherichia coli UM146 12700136 YP_006110533.1 CDS UM146_08150 NC_017632.1 1728615 1729730 D COG0349 Ribonuclease D; ribonuclease D 1728615..1729730 Escherichia coli UM146 12700137 YP_006110534.1 CDS UM146_08155 NC_017632.1 1730273 1730911 D COG1280 Putative threonine efflux protein; leucine export protein LeuE 1730273..1730911 Escherichia coli UM146 12700138 YP_006110535.1 CDS UM146_08160 NC_017632.1 1731084 1731443 D COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance; hypothetical protein 1731084..1731443 Escherichia coli UM146 12700139 YP_006110536.1 CDS UM146_08165 NC_017632.1 1731447 1731629 D Protein yoaG 1731447..1731629 Escherichia coli UM146 12700140 YP_006110537.1 CDS UM146_08170 NC_017632.1 1731777 1732025 D COG2261 Predicted membrane protein; hypothetical protein 1731777..1732025 Escherichia coli UM146 12700141 YP_006110538.1 CDS UM146_08175 NC_017632.1 1732292 1733317 R COG2199 FOG: GGDEF domain; putative diguanylate cyclase complement(1732292..1733317) Escherichia coli UM146 12700142 YP_006110539.1 CDS UM146_08180 NC_017632.1 1733500 1733754 D COG3042 Putative hemolysin; putative hemolysin 1733500..1733754 Escherichia coli UM146 12700143 YP_006110540.1 CDS UM146_08185 NC_017632.1 1733776 1734123 R COG3189 Uncharacterized conserved protein; hypothetical protein complement(1733776..1734123) Escherichia coli UM146 12700144 YP_006110541.1 CDS UM146_08190 NC_017632.1 1734178 1735359 R COG2807 Cyanate permease; putative transporter; MFS superfamily protein complement(1734178..1735359) Escherichia coli UM146 12700145 YP_006110542.1 CDS UM146_08195 NC_017632.1 1735456 1736277 D COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator 1735456..1736277 Escherichia coli UM146 12700146 YP_006110543.1 CDS UM146_08200 NC_017632.1 1736234 1736680 R COG2707 Predicted membrane protein; hypothetical protein complement(1736234..1736680) Escherichia coli UM146 12700147 YP_006110544.1 CDS UM146_08205 NC_017632.1 1736850 1736954 D hypothetical protein 1736850..1736954 Escherichia coli UM146 12700148 YP_006110545.1 CDS UM146_08210 NC_017632.1 1736955 1737458 R COG2606 Uncharacterized conserved protein; hypothetical protein complement(1736955..1737458) Escherichia coli UM146 12700149 YP_006110546.1 CDS UM146_08215 NC_017632.1 1737501 1738991 R COG2199 FOG: GGDEF domain; putative diguanylate cyclase complement(1737501..1738991) Escherichia coli UM146 12700150 YP_006110547.1 CDS UM146_08220 NC_017632.1 1739172 1740647 R COG2199 FOG: GGDEF domain; hypothetical protein complement(1739172..1740647) Escherichia coli UM146 12700151 YP_006110548.1 CDS UM146_08225 NC_017632.1 1740794 1742077 R COG2718 Uncharacterized conserved protein; hypothetical protein complement(1740794..1742077) Escherichia coli UM146 12700152 YP_006110549.1 CDS UM146_08230 NC_017632.1 1742190 1744124 R COG2766 Putative Ser protein kinase; putative serine protein kinase PrkA complement(1742190..1744124) Escherichia coli UM146 12700153 YP_006110550.1 CDS UM146_08235 NC_017632.1 1744560 1745306 D COG3713 Outer membrane protein V; MltA-interacting protein 1744560..1745306 Escherichia coli UM146 12700154 YP_006110551.1 CDS UM146_08240 NC_017632.1 1745396 1746250 D COG0656 Aldo/keto reductases, related to diketogulonate reductase; putative oxidoreductase 1745396..1746250 Escherichia coli UM146 12700155 YP_006110552.1 CDS UM146_08245 NC_017632.1 1746301 1747185 R COG0676 Uncharacterized enzymes related to aldose 1-epimerase; hypothetical protein complement(1746301..1747185) Escherichia coli UM146 12700156 YP_006110553.1 CDS UM146_08250 NC_017632.1 1747269 1748264 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(1747269..1748264) Escherichia coli UM146 12700157 YP_006110554.1 CDS UM146_08255 NC_017632.1 1748653 1749018 D COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; methionine sulfoxide reductase B 1748653..1749018 Escherichia coli UM146 12700158 YP_006110555.1 CDS UM146_08260 NC_017632.1 1749060 1749332 D COG3139 Uncharacterized protein conserved in bacteria; hypothetical protein 1749060..1749332 Escherichia coli UM146 12700159 YP_006110556.1 CDS UM146_08265 NC_017632.1 1749702 1750778 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative oxidoreductase, Zn-dependent and NAD(P)-binding protein 1749702..1750778 Escherichia coli UM146 12700160 YP_006110557.1 CDS UM146_08270 NC_017632.1 1750805 1752184 D COG0477 Permeases of the major facilitator superfamily; putative transporter; MFS superfamily protein 1750805..1752184 Escherichia coli UM146 12700161 YP_006110558.1 CDS UM146_08275 NC_017632.1 1752201 1753244 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative iditol dehydrogenase 1752201..1753244 Escherichia coli UM146 12700162 YP_006110559.1 CDS UM146_08280 NC_017632.1 1753265 1754101 D COG0191 Fructose/tagatose bisphosphate aldolase; putative aldolase 1753265..1754101 Escherichia coli UM146 12700163 YP_006110560.1 CDS UM146_08285 NC_017632.1 1754106 1755053 D COG0524 Sugar kinases, ribokinase family; sugar kinase 1754106..1755053 Escherichia coli UM146 12700164 YP_006110561.1 CDS UM146_08290 NC_017632.1 1755063 1756043 D COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); putative oxidoreductase 1755063..1756043 Escherichia coli UM146 12700165 YP_006110562.1 CDS UM146_08295 NC_017632.1 1756180 1756938 D COG1349 Transcriptional regulators of sugar metabolism; putative DEOR-type transcriptional regulator 1756180..1756938 Escherichia coli UM146 12700166 YP_006110563.1 CDS UM146_08300 NC_017632.1 1757056 1758414 D COG0477 Permeases of the major facilitator superfamily; putative transporter; MFS superfamily protein 1757056..1758414 Escherichia coli UM146 12700167 YP_006110564.1 CDS UM146_08305 NC_017632.1 1758507 1759148 R COG1335 Amidases related to nicotinamidase; nicotinamidase/pyrazinamidase complement(1758507..1759148) Escherichia coli UM146 12700168 YP_006110565.1 CDS ansA NC_017632.1 1759159 1760175 R COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; asparaginase complement(1759159..1760175) Escherichia coli UM146 12700169 YP_006110566.1 CDS UM146_08315 NC_017632.1 1760342 1762198 R COG0616 Periplasmic serine proteases (ClpP class); protease 4 complement(1760342..1762198) Escherichia coli UM146 12700170 YP_006110567.1 CDS UM146_08320 NC_017632.1 1762359 1762910 D COG0778 Nitroreductase; hypothetical protein 1762359..1762910 Escherichia coli UM146 12700171 YP_006110568.1 CDS UM146_08325 NC_017632.1 1763027 1764070 D COG0709 Selenophosphate synthase; selenophosphate synthetase 1763027..1764070 Escherichia coli UM146 12700172 YP_006110569.1 CDS UM146_08330 NC_017632.1 1764075 1766030 D COG0550 Topoisomerase IA; DNA topoisomerase III 1764075..1766030 Escherichia coli UM146 12700173 YP_006110570.1 CDS UM146_08335 NC_017632.1 1766107 1767450 R COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase complement(1766107..1767450) Escherichia coli UM146 12700174 YP_006110571.1 CDS UM146_08340 NC_017632.1 1767686 1767958 D hypothetical protein 1767686..1767958 Escherichia coli UM146 12700175 YP_006110572.1 CDS UM146_08345 NC_017632.1 1767924 1768331 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase complement(1767924..1768331) Escherichia coli UM146 12700176 YP_006110573.1 CDS UM146_08350 NC_017632.1 1768418 1769038 D COG0558 Phosphatidylglycerophosphate synthase; hypothetical protein 1768418..1769038 Escherichia coli UM146 12700177 YP_006110574.1 CDS UM146_08355 NC_017632.1 1769047 1770354 R COG2897 Rhodanese-related sulfurtransferase; putative thiosulfate sulfur transferase complement(1769047..1770354) Escherichia coli UM146 12700178 YP_006110575.1 CDS UM146_08360 NC_017632.1 1770421 1771074 R COG4136 ABC-type uncharacterized transport system, ATPase component; ABC transporter ATP-binding protein complement(1770421..1771074) Escherichia coli UM146 12700179 YP_006110576.1 CDS UM146_08365 NC_017632.1 1771074 1772609 R COG4135 ABC-type uncharacterized transport system, permease component; putative ABC transporter permease protein YnjC complement(1771074..1772609) Escherichia coli UM146 12700180 YP_006110577.1 CDS UM146_08380 NC_017632.1 1773757 1774305 R COG2128 Uncharacterized conserved protein; hypothetical protein complement(1773757..1774305) Escherichia coli UM146 12700181 YP_006110578.1 CDS UM146_08385 NC_017632.1 1774305 1775009 R COG0398 Uncharacterized conserved protein; hypothetical protein complement(1774305..1775009) Escherichia coli UM146 12700182 YP_006110579.1 CDS UM146_08390 NC_017632.1 1775026 1775703 R hypothetical protein complement(1775026..1775703) Escherichia coli UM146 12700183 YP_006110580.1 CDS UM146_08395 NC_017632.1 1775708 1776418 R COG0398 Uncharacterized conserved protein; hypothetical protein complement(1775708..1776418) Escherichia coli UM146 12700184 YP_006110581.1 CDS UM146_08400 NC_017632.1 1776585 1777391 R COG0708 Exonuclease III; exonuclease III complement(1776585..1777391) Escherichia coli UM146 12700185 YP_006110582.1 CDS UM146_08405 NC_017632.1 1777837 1779057 D COG4992 Ornithine/acetylornithine aminotransferase; bifunctional succinylornithine transaminase/acetylornithine transaminase 1777837..1779057 Escherichia coli UM146 12700186 YP_006110583.1 CDS UM146_08410 NC_017632.1 1779054 1780088 D COG3138 Arginine/ornithine N-succinyltransferase beta subunit; arginine succinyltransferase 1779054..1780088 Escherichia coli UM146 12700187 YP_006110584.1 CDS astD NC_017632.1 1780085 1781563 D COG1012 NAD-dependent aldehyde dehydrogenases; succinylglutamic semialdehyde dehydrogenase 1780085..1781563 Escherichia coli UM146 12700188 YP_006110585.1 CDS UM146_08420 NC_017632.1 1781464 1781610 R hypothetical protein complement(1781464..1781610) Escherichia coli UM146 12700189 YP_006110586.1 CDS UM146_08425 NC_017632.1 1781560 1782903 D COG3724 Succinylarginine dihydrolase; succinylarginine dihydrolase 1781560..1782903 Escherichia coli UM146 12700190 YP_006110587.1 CDS UM146_08430 NC_017632.1 1782896 1783864 D COG2988 Succinylglutamate desuccinylase; succinylglutamate desuccinylase 1782896..1783864 Escherichia coli UM146 12700191 YP_006110588.1 CDS UM146_08435 NC_017632.1 1784193 1784678 D COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; hypothetical protein 1784193..1784678 Escherichia coli UM146 12700192 YP_006110589.1 CDS UM146_08440 NC_017632.1 1784881 1785456 D COG3758 Uncharacterized protein conserved in bacteria; hypothetical protein 1784881..1785456 Escherichia coli UM146 12700193 YP_006110590.1 CDS UM146_08445 NC_017632.1 1785416 1786303 R COG0322 Nuclease subunit of the excinuclease complex; nucleotide excision repair endonuclease complement(1785416..1786303) Escherichia coli UM146 12700194 YP_006110591.1 CDS nadE NC_017632.1 1786533 1787360 R COG0171 NAD synthase; NAD synthetase complement(1786533..1787360) Escherichia coli UM146 12700195 YP_006110592.1 CDS UM146_08455 NC_017632.1 1787562 1787900 D DNA-binding transcriptional activator OsmE 1787562..1787900 Escherichia coli UM146 12700196 YP_006110593.1 CDS UM146_08460 NC_017632.1 1788199 1788519 D COG1440 Phosphotransferase system cellobiose-specific component IIB; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB 1788199..1788519 Escherichia coli UM146 12700197 YP_006110594.1 CDS UM146_08465 NC_017632.1 1788604 1789962 D COG1455 Phosphotransferase system cellobiose-specific component IIC; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC 1788604..1789962 Escherichia coli UM146 12700198 YP_006110595.1 CDS UM146_08470 NC_017632.1 1790013 1790363 D COG1447 Phosphotransferase system cellobiose-specific component IIA; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA 1790013..1790363 Escherichia coli UM146 12700199 YP_006110596.1 CDS UM146_08475 NC_017632.1 1790374 1791213 D COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator ChbR 1790374..1791213 Escherichia coli UM146 12700200 YP_006110597.1 CDS UM146_08480 NC_017632.1 1791317 1792669 D COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; cryptic phospho-beta-glucosidase, NAD(P)-binding protein 1791317..1792669 Escherichia coli UM146 12700201 YP_006110598.1 CDS UM146_08485 NC_017632.1 1792682 1793440 D COG3394 Uncharacterized protein conserved in bacteria; hypothetical protein 1792682..1793440 Escherichia coli UM146 12700202 YP_006110599.1 CDS katE NC_017632.1 1793486 1795747 R COG0753 Catalase; hydroperoxidase II complement(1793486..1795747) Escherichia coli UM146 12700203 YP_006110600.1 CDS UM146_08495 NC_017632.1 1795951 1796193 D cell division modulator 1795951..1796193 Escherichia coli UM146 12700204 YP_006110601.1 CDS UM146_08500 NC_017632.1 1796240 1797631 R COG1823 Predicted Na+/dicarboxylate symporter; symporter protein YdjN complement(1796240..1797631) Escherichia coli UM146 12700205 YP_006110602.1 CDS UM146_08505 NC_017632.1 1797764 1798354 R COG1988 Predicted membrane-bound metal-dependent hydrolases; hypothetical protein complement(1797764..1798354) Escherichia coli UM146 12700206 YP_006110603.1 CDS UM146_08510 NC_017632.1 1798518 1799186 R COG0637 Predicted phosphatase/phosphohexomutase; 2-deoxyglucose-6-phosphatase complement(1798518..1799186) Escherichia coli UM146 12700207 YP_006110604.1 CDS UM146_08515 NC_017632.1 1799333 1799869 D hypothetical protein 1799333..1799869 Escherichia coli UM146 12700208 YP_006110605.1 CDS UM146_08520 NC_017632.1 1799910 1800770 R COG3001 Fructosamine-3-kinase; putative phosphotransferase/kinase complement(1799910..1800770) Escherichia coli UM146 12700209 YP_006110606.1 CDS UM146_08525 NC_017632.1 1800876 1801166 R COG3343 DNA-directed RNA polymerase, delta subunit; hypothetical protein complement(1800876..1801166) Escherichia coli UM146 12700210 YP_006110607.1 CDS UM146_08530 NC_017632.1 1801267 1802196 R COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); 6-phosphofructokinase complement(1801267..1802196) Escherichia coli UM146 12700211 YP_006110608.1 CDS UM146_08535 NC_017632.1 1802482 1803240 D COG3137 Putative salt-induced outer membrane protein; hypothetical protein 1802482..1803240 Escherichia coli UM146 12700212 YP_006110609.1 CDS UM146_08540 NC_017632.1 1803293 1803400 R hypothetical protein complement(1803293..1803400) Escherichia coli UM146 12700213 YP_006110610.1 CDS UM146_08555 NC_017632.1 1805123 1807051 D COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 1805123..1807051 Escherichia coli UM146 12700214 YP_006110611.1 CDS infC NC_017632.1 1807163 1807597 D COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 1807163..1807597 Escherichia coli UM146 12700215 YP_006110612.1 CDS rpmI NC_017632.1 1807694 1807891 D COG0291 Ribosomal protein L35; 50S ribosomal protein L35 1807694..1807891 Escherichia coli UM146 12700216 YP_006110613.1 CDS rplT NC_017632.1 1807944 1808300 D COG0292 Ribosomal protein L20; 50S ribosomal protein L20 1807944..1808300 Escherichia coli UM146 12700217 YP_006110614.1 CDS UM146_08575 NC_017632.1 1808542 1808637 D hypothetical protein 1808542..1808637 Escherichia coli UM146 12700218 YP_006110615.1 CDS pheS NC_017632.1 1808751 1809734 D COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1808751..1809734 Escherichia coli UM146 12700219 YP_006110616.1 CDS pheT NC_017632.1 1809749 1812136 D COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 1809749..1812136 Escherichia coli UM146 12700220 YP_006110617.1 CDS ihfA NC_017632.1 1812141 1812440 D COG0776 Bacterial nucleoid DNA-binding protein; integration host factor subunit alpha 1812141..1812440 Escherichia coli UM146 12700221 YP_006110618.1 CDS UM146_08595 NC_017632.1 1812541 1813521 D COG4139 ABC-type cobalamin transport system, permease component; vtamin B12-transporter permease 1812541..1813521 Escherichia coli UM146 12700222 YP_006110619.1 CDS btuE NC_017632.1 1813583 1814134 D COG0386 Glutathione peroxidase; putative glutathione peroxidase 1813583..1814134 Escherichia coli UM146 12700223 YP_006110620.1 CDS UM146_08605 NC_017632.1 1814134 1814883 D COG4138 ABC-type cobalamin transport system, ATPase component; vitamin B12-transporter ATPase 1814134..1814883 Escherichia coli UM146 12700224 YP_006110621.1 CDS UM146_08610 NC_017632.1 1814961 1815425 D COG0791 Cell wall-associated hydrolases (invasion-associated proteins); putative peptidase lipoprotein 1814961..1815425 Escherichia coli UM146 12700225 YP_006110622.1 CDS UM146_08615 NC_017632.1 1815672 1816385 D COG2200 FOG: EAL domain; hypothetical protein 1815672..1816385 Escherichia coli UM146 12700226 YP_006110623.1 CDS UM146_08620 NC_017632.1 1816448 1817884 D COG0397 Uncharacterized conserved protein; hypothetical protein 1816448..1817884 Escherichia coli UM146 12700227 YP_006110624.1 CDS UM146_08625 NC_017632.1 1817888 1818106 R COG4256 Hemin uptake protein; hypothetical protein complement(1817888..1818106) Escherichia coli UM146 12700228 YP_006110625.1 CDS UM146_08630 NC_017632.1 1818211 1819257 R COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1818211..1819257) Escherichia coli UM146 12700229 YP_006110626.1 CDS UM146_08635 NC_017632.1 1819414 1820247 R COG1806 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1819414..1820247) Escherichia coli UM146 12700230 YP_006110627.1 CDS UM146_08640 NC_017632.1 1820580 1822958 D COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase 1820580..1822958 Escherichia coli UM146 12700231 YP_006110628.1 CDS UM146_08645 NC_017632.1 1823015 1824661 R COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; short chain acyl-CoA synthetase complement(1823015..1824661) Escherichia coli UM146 12700232 YP_006110629.1 CDS UM146_08650 NC_017632.1 1824718 1825011 R COG2440 Ferredoxin-like protein; ferredoxin-like protein ydiT complement(1824718..1825011) Escherichia coli UM146 12700233 YP_006110630.1 CDS UM146_08655 NC_017632.1 1825008 1826297 R COG0644 Dehydrogenases (flavoproteins); hypothetical protein complement(1825008..1826297) Escherichia coli UM146 12700234 YP_006110631.1 CDS UM146_08660 NC_017632.1 1826352 1827290 R COG2025 Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit YdiR complement(1826352..1827290) Escherichia coli UM146 12700235 YP_006110632.1 CDS UM146_08665 NC_017632.1 1827310 1828074 R COG2086 Electron transfer flavoprotein, beta subunit; putative electron transfer flavoprotein YdiQ complement(1827310..1828074) Escherichia coli UM146 12700236 YP_006110633.1 CDS UM146_08670 NC_017632.1 1828390 1829301 D COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator 1828390..1829301 Escherichia coli UM146 12700237 YP_006110634.1 CDS UM146_08675 NC_017632.1 1829344 1830495 R COG1960 Acyl-CoA dehydrogenases; putative acyl-CoA dehydrogenase complement(1829344..1830495) Escherichia coli UM146 12700238 YP_006110635.1 CDS UM146_08680 NC_017632.1 1830509 1832104 R COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; short chain acyl-CoA transferase: fused alpha subunit ; beta subunit complement(1830509..1832104) Escherichia coli UM146 12700239 YP_006110636.1 CDS aroD NC_017632.1 1832250 1833008 R COG0710 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase complement(1832250..1833008) Escherichia coli UM146 12700240 YP_006110637.1 CDS UM146_08690 NC_017632.1 1833039 1833905 R COG0169 Shikimate 5-dehydrogenase; quinate/shikimate dehydrogenase complement(1833039..1833905) Escherichia coli UM146 12700241 YP_006110638.1 CDS UM146_08695 NC_017632.1 1833917 1835182 R COG0477 Permeases of the major facilitator superfamily; putative transporter complement(1833917..1835182) Escherichia coli UM146 12700242 YP_006110639.1 CDS UM146_08700 NC_017632.1 1835409 1836623 R COG0477 Permeases of the major facilitator superfamily; putative transporter; MFS superfamily protein complement(1835409..1836623) Escherichia coli UM146 12700243 YP_006110640.1 CDS UM146_08705 NC_017632.1 1836723 1837079 R hypothetical protein complement(1836723..1837079) Escherichia coli UM146 12700244 YP_006110641.1 CDS UM146_08710 NC_017632.1 1837508 1838113 R COG0628 Predicted permease; putative inner membrane protein complement(1837508..1838113) Escherichia coli UM146 12700245 YP_006110642.1 CDS UM146_08715 NC_017632.1 1838076 1838621 R COG0628 Predicted permease; putative inner membrane protein complement(1838076..1838621) Escherichia coli UM146 12700246 YP_006110643.1 CDS UM146_08720 NC_017632.1 1838835 1841891 D COG0277 FAD/FMN-containing dehydrogenases; putative FAD-linked oxidoreductase 1838835..1841891 Escherichia coli UM146 12700247 YP_006110644.1 CDS UM146_08725 NC_017632.1 1841888 1842298 D COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein 1841888..1842298 Escherichia coli UM146 12700248 YP_006110645.1 CDS UM146_08730 NC_017632.1 1842317 1842586 D hypothetical protein 1842317..1842586 Escherichia coli UM146 12700249 YP_006110646.1 CDS sufA NC_017632.1 1843135 1843503 D COG0316 Uncharacterized conserved protein; iron-sulfur cluster assembly scaffold protein 1843135..1843503 Escherichia coli UM146 12700250 YP_006110647.1 CDS UM146_08740 NC_017632.1 1843512 1844999 D COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; cysteine desulfurase activator complex subunit SufB 1843512..1844999 Escherichia coli UM146 12700251 YP_006110648.1 CDS sufC NC_017632.1 1845009 1845755 D COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component; cysteine desulfurase 1845009..1845755 Escherichia coli UM146 12700252 YP_006110649.1 CDS UM146_08750 NC_017632.1 1845730 1847001 D COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; cysteine desulfurase activator complex subunit SufD 1845730..1847001 Escherichia coli UM146 12700253 YP_006110650.1 CDS UM146_08755 NC_017632.1 1846998 1848218 D COG0520 Selenocysteine lyase; bifunctional cysteine desulfurase/selenocysteine lyase 1846998..1848218 Escherichia coli UM146 12700254 YP_006110651.1 CDS UM146_08760 NC_017632.1 1848231 1848647 D COG2166 SufE protein probably involved in Fe-S center assembly; cysteine desufuration protein SufE 1848231..1848647 Escherichia coli UM146 12700255 YP_006110652.1 CDS UM146_08765 NC_017632.1 1848796 1849800 D COG1376 Uncharacterized protein conserved in bacteria; hypothetical protein 1848796..1849800 Escherichia coli UM146 12700256 YP_006110653.1 CDS UM146_08770 NC_017632.1 1849863 1850099 R COG4238 Murein lipoprotein; Major outer membrane lipoprotein precursor complement(1849863..1850099) Escherichia coli UM146 12700257 YP_006110654.1 CDS UM146_08775 NC_017632.1 1850408 1851820 R COG0469 Pyruvate kinase; pyruvate kinase complement(1850408..1851820) Escherichia coli UM146 12700258 YP_006110655.1 CDS UM146_08780 NC_017632.1 1852377 1852586 D hypothetical protein 1852377..1852586 Escherichia coli UM146 12700259 YP_006110656.1 CDS UM146_08785 NC_017632.1 1853042 1853668 D COG0437 Fe-S-cluster-containing hydrogenase components 1; hypothetical protein 1853042..1853668 Escherichia coli UM146 12700260 YP_006110657.1 CDS UM146_08790 NC_017632.1 1853689 1855791 D COG2414 Aldehyde:ferredoxin oxidoreductase; putative oxidoreductase 1853689..1855791 Escherichia coli UM146 12700261 YP_006110658.1 CDS UM146_08795 NC_017632.1 1855804 1856442 D hypothetical protein 1855804..1856442 Escherichia coli UM146 12700262 YP_006110659.1 CDS UM146_08800 NC_017632.1 1856455 1857174 D COG0437 Fe-S-cluster-containing hydrogenase components 1; putative oxidoreductase Fe-S subunit 1856455..1857174 Escherichia coli UM146 12700263 YP_006110660.1 CDS UM146_08805 NC_017632.1 1857171 1857956 D putative cytochrome b subunit of a reductase 1857171..1857956 Escherichia coli UM146 12700264 YP_006110661.1 CDS UM146_08810 NC_017632.1 1857960 1858772 D hypothetical protein 1857960..1858772 Escherichia coli UM146 12700265 YP_006110662.1 CDS UM146_08815 NC_017632.1 1858784 1860388 R COG4529 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1858784..1860388) Escherichia coli UM146 12700266 YP_006110663.1 CDS UM146_08820 NC_017632.1 1860514 1860819 R COG0113 Delta-aminolevulinic acid dehydratase; hypothetical protein complement(1860514..1860819) Escherichia coli UM146 12700267 YP_006110664.1 CDS UM146_08825 NC_017632.1 1861393 1862649 D hypothetical protein 1861393..1862649 Escherichia coli UM146 12700270 YP_006110665.1 CDS UM146_08830 NC_017632.1 1862690 1864063 R COG0534 Na+-driven multidrug efflux pump; multidrug efflux protein complement(1862690..1864063) Escherichia coli UM146 12700271 YP_006110666.1 CDS UM146_08835 NC_017632.1 1864278 1864919 D COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 1864278..1864919 Escherichia coli UM146 12700272 YP_006110667.1 CDS UM146_08840 NC_017632.1 1864959 1866107 R COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane-fatty-acyl-phospholipid synthase complement(1864959..1866107) Escherichia coli UM146 12700273 YP_006110668.1 CDS UM146_08845 NC_017632.1 1866398 1867609 R COG0477 Permeases of the major facilitator superfamily; inner membrane transport protein YdhC complement(1866398..1867609) Escherichia coli UM146 12700274 YP_006110669.1 CDS UM146_08850 NC_017632.1 1867722 1868654 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 1867722..1868654 Escherichia coli UM146 12700275 YP_006110670.1 CDS UM146_08855 NC_017632.1 1868651 1869676 R COG1609 Transcriptional regulators; DNA-binding transcriptional repressor PurR complement(1868651..1869676) Escherichia coli UM146 12700276 YP_006110671.1 CDS UM146_08860 NC_017632.1 1869975 1870064 D membrane protein 1869975..1870064 Escherichia coli UM146 12700277 YP_006110672.1 CDS UM146_08865 NC_017632.1 1870230 1871399 D COG2814 Arabinose efflux permease; transporter 1870230..1871399 Escherichia coli UM146 12700278 YP_006110673.1 CDS UM146_08870 NC_017632.1 1871545 1872126 R COG0605 Superoxide dismutase; superoxide dismutase complement(1871545..1872126) Escherichia coli UM146 12700279 YP_006110674.1 CDS UM146_08875 NC_017632.1 1872254 1873069 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); putative exported hydrolase complement(1872254..1873069) Escherichia coli UM146 12700280 YP_006110675.1 CDS UM146_08880 NC_017632.1 1873404 1873751 D COG0278 Glutaredoxin-related protein; hypothetical protein 1873404..1873751 Escherichia coli UM146 12700281 YP_006110676.1 CDS UM146_08885 NC_017632.1 1873887 1874030 R hypothetical protein complement(1873887..1874030) Escherichia coli UM146 12700282 YP_006110677.1 CDS UM146_08890 NC_017632.1 1874123 1874770 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; ribonuclease T complement(1874123..1874770) Escherichia coli UM146 12700283 YP_006110678.1 CDS UM146_08895 NC_017632.1 1874873 1875280 R COG0346 Lactoylglutathione lyase and related lyases; glyoxalase I complement(1874873..1875280) Escherichia coli UM146 12700284 YP_006110679.1 CDS UM146_08900 NC_017632.1 1875361 1876458 R COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; N-ethylmaleimide reductase complement(1875361..1876458) Escherichia coli UM146 12700285 YP_006110680.1 CDS UM146_08905 NC_017632.1 1876495 1877094 R COG1309 Transcriptional regulator; putative DNA-binding transcriptional regulator complement(1876495..1877094) Escherichia coli UM146 12700286 YP_006110681.1 CDS UM146_08910 NC_017632.1 1877026 1877436 D COG3313 Predicted Fe-S protein; hypothetical protein 1877026..1877436 Escherichia coli UM146 12700287 YP_006110682.1 CDS UM146_08915 NC_017632.1 1877485 1878381 D COG4989 Predicted oxidoreductase; putative oxidoreductase 1877485..1878381 Escherichia coli UM146 12700288 YP_006110683.1 CDS UM146_08920 NC_017632.1 1878447 1878983 D COG2032 Cu/Zn superoxide dismutase; superoxide dismutase 1878447..1878983 Escherichia coli UM146 12700289 YP_006110684.1 CDS UM146_08925 NC_017632.1 1878984 1880996 R COG1289 Predicted membrane protein; hypothetical protein complement(1878984..1880996) Escherichia coli UM146 12700290 YP_006110685.1 CDS UM146_08930 NC_017632.1 1880996 1881853 R COG1566 Multidrug resistance efflux pump; undecaprenyl pyrophosphate phosphatase complement(1880996..1881853) Escherichia coli UM146 12700291 YP_006110686.1 CDS UM146_08935 NC_017632.1 1881856 1882092 R hypothetical protein complement(1881856..1882092) Escherichia coli UM146 12700292 YP_006110687.1 CDS UM146_08940 NC_017632.1 1882293 1882727 D COG1846 Transcriptional regulators; transcriptional regulator SlyA 1882293..1882727 Escherichia coli UM146 12700293 YP_006110688.1 CDS UM146_08945 NC_017632.1 1882774 1883241 R COG3133 Outer membrane lipoprotein; putative outer membrane lipoprotein complement(1882774..1883241) Escherichia coli UM146 12700294 YP_006110689.1 CDS anmK NC_017632.1 1883515 1884624 D COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases; anhydro-N-acetylmuramic acid kinase 1883515..1884624 Escherichia coli UM146 12700295 YP_006110690.1 CDS UM146_08955 NC_017632.1 1884722 1885051 D COG3895 Predicted periplasmic protein; lysozyme inhibitor 1884722..1885051 Escherichia coli UM146 12700296 YP_006110691.1 CDS UM146_08960 NC_017632.1 1885110 1885766 D COG0259 Pyridoxamine-phosphate oxidase; pyridoxamine 5'-phosphate oxidase 1885110..1885766 Escherichia coli UM146 12700297 YP_006110692.1 CDS UM146_08965 NC_017632.1 1885883 1887169 D COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 1885883..1887169 Escherichia coli UM146 12700298 YP_006110693.1 CDS UM146_08970 NC_017632.1 1887231 1888091 D COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxamine kinase 1887231..1888091 Escherichia coli UM146 12700299 YP_006110694.1 CDS UM146_08975 NC_017632.1 1888135 1888740 R COG0625 Glutathione S-transferase; glutathionine S-transferase complement(1888135..1888740) Escherichia coli UM146 12700300 YP_006110695.1 CDS tppB NC_017632.1 1888845 1890347 R COG3104 Dipeptide/tripeptide permease; putative tripeptide transporter permease complement(1888845..1890347) Escherichia coli UM146 12700301 YP_006110696.1 CDS UM146_08985 NC_017632.1 1890630 1890830 R hypothetical protein complement(1890630..1890830) Escherichia coli UM146 12700302 YP_006110697.1 CDS UM146_08990 NC_017632.1 1890958 1891593 R COG0177 Predicted EndoIII-related endonuclease; endonuclease III complement(1890958..1891593) Escherichia coli UM146 12700303 YP_006110698.1 CDS UM146_08995 NC_017632.1 1891593 1892288 R COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE; electron transport complex protein RsxE complement(1891593..1892288) Escherichia coli UM146 12700304 YP_006110699.1 CDS UM146_09000 NC_017632.1 1892292 1892912 R COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG; electron transport complex protein RnfG complement(1892292..1892912) Escherichia coli UM146 12700305 YP_006110700.1 CDS rnfD NC_017632.1 1892916 1893974 R COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD; electron transport complex protein RnfD complement(1892916..1893974) Escherichia coli UM146 12700306 YP_006110701.1 CDS UM146_09010 NC_017632.1 1893975 1896101 R COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC; electron transport complex protein RnfC complement(1893975..1896101) Escherichia coli UM146 12700307 YP_006110702.1 CDS UM146_09015 NC_017632.1 1896094 1896672 R COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB; electron transport complex protein RnfB complement(1896094..1896672) Escherichia coli UM146 12700308 YP_006110703.1 CDS UM146_09020 NC_017632.1 1896672 1897253 R COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA; Na(+)-translocating NADH-quinone reductase subunit E complement(1896672..1897253) Escherichia coli UM146 12700309 YP_006110704.1 CDS UM146_09025 NC_017632.1 1897330 1897770 R hypothetical protein complement(1897330..1897770) Escherichia coli UM146 12700310 YP_006110705.1 CDS UM146_09030 NC_017632.1 1897856 1898071 R oriC-binding nucleoid-associated protein complement(1897856..1898071) Escherichia coli UM146 12700311 YP_006110706.1 CDS UM146_09035 NC_017632.1 1898712 1899752 D COG0673 Predicted dehydrogenases and related proteins; putative oxidoreductase 1898712..1899752 Escherichia coli UM146 12700312 YP_006110707.1 CDS UM146_09040 NC_017632.1 1899788 1900789 R COG1816 Adenosine deaminase; adenosine deaminase complement(1899788..1900789) Escherichia coli UM146 12700313 YP_006110708.1 CDS UM146_09045 NC_017632.1 1900893 1902065 R COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon complement(1900893..1902065) Escherichia coli UM146 12700314 YP_006110709.1 CDS UM146_09050 NC_017632.1 1902075 1903667 R COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; PTS system maltose and glucose-specific transporter subunit IICB complement(1902075..1903667) Escherichia coli UM146 12700315 YP_006110710.1 CDS UM146_09055 NC_017632.1 1903842 1904870 D COG1609 Transcriptional regulators; DNA-binding transcriptional repressor MalI 1903842..1904870 Escherichia coli UM146 12700316 YP_006110711.1 CDS UM146_09060 NC_017632.1 1904982 1905749 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 7-alpha-hydroxysteroid dehydrogenase 1904982..1905749 Escherichia coli UM146 12700317 YP_006110712.1 CDS UM146_09065 NC_017632.1 1905978 1906568 D COG1309 Transcriptional regulator; repressor for uid operon 1905978..1906568 Escherichia coli UM146 12700318 YP_006110713.1 CDS UM146_09070 NC_017632.1 1906958 1908769 D COG3250 Beta-galactosidase/beta-glucuronidase; beta-D-glucuronidase 1906958..1908769 Escherichia coli UM146 12700319 YP_006110714.1 CDS UM146_09075 NC_017632.1 1908766 1910139 D COG2211 Na+/melibiose symporter and related transporters; glucuronide transporter 1908766..1910139 Escherichia coli UM146 12700320 YP_006110715.1 CDS UM146_09080 NC_017632.1 1910178 1911443 D putative outer membrane porin protein 1910178..1911443 Escherichia coli UM146 12700321 YP_006110716.1 CDS UM146_09085 NC_017632.1 1911488 1912996 R COG5339 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1911488..1912996) Escherichia coli UM146 12700322 YP_006110717.1 CDS UM146_09090 NC_017632.1 1913097 1914272 R COG1482 Phosphomannose isomerase; mannose-6-phosphate isomerase complement(1913097..1914272) Escherichia coli UM146 12700323 YP_006110718.1 CDS UM146_09095 NC_017632.1 1914471 1916117 D COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; fumarate hydratase (fumarase A), aerobic Class I 1914471..1916117 Escherichia coli UM146 12700324 YP_006110719.1 CDS fumC NC_017632.1 1916260 1917663 D COG0114 Fumarase; fumarate hydratase 1916260..1917663 Escherichia coli UM146 12700325 YP_006110720.1 CDS UM146_09105 NC_017632.1 1917660 1918601 R DNA replication terminus site-binding protein complement(1917660..1918601) Escherichia coli UM146 12700326 YP_006110721.1 CDS UM146_09120 NC_017632.1 1919969 1920688 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator RstA complement(1919969..1920688) Escherichia coli UM146 12700327 YP_006110722.1 CDS UM146_09125 NC_017632.1 1920817 1921152 D COG3136 Uncharacterized membrane protein required for alginate biosynthesis; GlpM family protein 1920817..1921152 Escherichia coli UM146 12700328 YP_006110723.1 CDS UM146_09130 NC_017632.1 1921098 1921214 D hypothetical protein 1921098..1921214 Escherichia coli UM146 12700329 YP_006110724.1 CDS UM146_09135 NC_017632.1 1921149 1921871 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase complement(1921149..1921871) Escherichia coli UM146 12700330 YP_006110725.1 CDS UM146_09140 NC_017632.1 1921908 1923290 R COG0531 Amino acid transporters; putative arginine/ornithine antiporter transporter complement(1921908..1923290) Escherichia coli UM146 12700331 YP_006110726.1 CDS UM146_09145 NC_017632.1 1923476 1924420 R hypothetical protein complement(1923476..1924420) Escherichia coli UM146 12700332 YP_006110727.1 CDS pntA NC_017632.1 1924944 1926476 D COG3288 NAD/NADP transhydrogenase alpha subunit; NAD(P) transhydrogenase subunit alpha 1924944..1926476 Escherichia coli UM146 12700333 YP_006110728.1 CDS pntB NC_017632.1 1926487 1927875 D COG1282 NAD/NADP transhydrogenase beta subunit; pyridine nucleotide transhydrogenase 1926487..1927875 Escherichia coli UM146 12700334 YP_006110729.1 CDS tqsA NC_017632.1 1927900 1928934 R COG0628 Predicted permease; putative transport protein complement(1927900..1928934) Escherichia coli UM146 12700335 YP_006110730.1 CDS UM146_09165 NC_017632.1 1929345 1929710 D COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux system protein MdtJ 1929345..1929710 Escherichia coli UM146 12700336 YP_006110731.1 CDS UM146_09170 NC_017632.1 1929697 1930026 D COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux system protein MdtI 1929697..1930026 Escherichia coli UM146 12700337 YP_006110732.1 CDS UM146_09175 NC_017632.1 1930065 1930886 R COG3591 V8-like Glu-specific endopeptidase; putative exported metallopeptidase complement(1930065..1930886) Escherichia coli UM146 12700338 YP_006110733.1 CDS UM146_09180 NC_017632.1 1931162 1931497 R hypothetical protein complement(1931162..1931497) Escherichia coli UM146 12700339 YP_006110734.1 CDS UM146_09185 NC_017632.1 1931895 1933148 R COG0477 Permeases of the major facilitator superfamily; putative transporter; MFS type complement(1931895..1933148) Escherichia coli UM146 12700340 YP_006110735.1 CDS UM146_09190 NC_017632.1 1933255 1934148 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 1933255..1934148 Escherichia coli UM146 12700341 YP_006110736.1 CDS UM146_09195 NC_017632.1 1934283 1935503 D COG1940 Transcriptional regulator/sugar kinase; putative NAGC-like transcriptional regulator 1934283..1935503 Escherichia coli UM146 12700342 YP_006110737.1 CDS UM146_09200 NC_017632.1 1935628 1936323 D COG0132 Dethiobiotin synthetase; putative dithiobiotin synthetase 1935628..1936323 Escherichia coli UM146 12700343 YP_006110738.1 CDS UM146_09205 NC_017632.1 1936276 1937457 R COG0038 Chloride channel protein EriC; putative voltage-gated ClC-type chloride channel ClcB complement(1936276..1937457) Escherichia coli UM146 12700344 YP_006110739.1 CDS UM146_09210 NC_017632.1 1937654 1938268 R COG3381 Uncharacterized component of anaerobic dehydrogenases; twin-argninine leader-binding protein DmsD complement(1937654..1938268) Escherichia coli UM146 12700345 YP_006110740.1 CDS UM146_09215 NC_017632.1 1938311 1939165 R COG3302 DMSO reductase anchor subunit; oxidoreductase, membrane subunit complement(1938311..1939165) Escherichia coli UM146 12700346 YP_006110741.1 CDS UM146_09220 NC_017632.1 1939167 1939784 R COG0437 Fe-S-cluster-containing hydrogenase components 1; putative anaerobic dimethyl sulfoxide reductase chain ynfG complement(1939167..1939784) Escherichia coli UM146 12700347 YP_006110742.1 CDS UM146_09225 NC_017632.1 1939795 1942221 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; putative dimethyl sulfoxide reductase chain YnfF precursor complement(1939795..1942221) Escherichia coli UM146 12700348 YP_006110743.1 CDS UM146_09240 NC_017632.1 1944903 1945208 R hypothetical protein complement(1944903..1945208) Escherichia coli UM146 12700349 YP_006110744.1 CDS UM146_09245 NC_017632.1 1945316 1946026 D hypothetical protein 1945316..1946026 Escherichia coli UM146 12700350 YP_006110745.1 CDS UM146_09250 NC_017632.1 1946029 1946589 R COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; spermidine N1-acetyltransferase complement(1946029..1946589) Escherichia coli UM146 12700351 YP_006110746.1 CDS UM146_09255 NC_017632.1 1946624 1946965 R hypothetical protein complement(1946624..1946965) Escherichia coli UM146 12700352 YP_006110747.1 CDS UM146_09260 NC_017632.1 1947100 1947426 D COG1742 Uncharacterized conserved protein; hypothetical protein 1947100..1947426 Escherichia coli UM146 12700353 YP_006110748.1 CDS UM146_09265 NC_017632.1 1947632 1948846 D COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; starvation sensing protein RspA 1947632..1948846 Escherichia coli UM146 12700354 YP_006110749.1 CDS UM146_09270 NC_017632.1 1948858 1949877 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative dehydrogenase 1948858..1949877 Escherichia coli UM146 12700355 YP_006110750.1 CDS UM146_09275 NC_017632.1 1950041 1950289 D COG0477 Permeases of the major facilitator superfamily; transporter 1950041..1950289 Escherichia coli UM146 12700356 YP_006110751.1 CDS UM146_09280 NC_017632.1 1950378 1951838 D COG0246 Mannitol-1-phosphate/altronate dehydrogenases; putative mannonate dehydrogenase 1950378..1951838 Escherichia coli UM146 12700357 YP_006110752.1 CDS UM146_09285 NC_017632.1 1951874 1952077 R putative selenoprotein ydfZ complement(1951874..1952077) Escherichia coli UM146 12700358 YP_006110753.1 CDS UM146_09290 NC_017632.1 1952254 1952940 R COG1802 Transcriptional regulators; hypothetical protein complement(1952254..1952940) Escherichia coli UM146 12700359 YP_006110754.1 CDS UM146_09295 NC_017632.1 1953029 1953775 R COG4221 Short-chain alcohol dehydrogenase of unknown specificity; 3-hydroxy acid dehydrogenase complement(1953029..1953775) Escherichia coli UM146 12700360 YP_006110755.1 CDS UM146_09300 NC_017632.1 1953912 1955957 D COG0339 Zn-dependent oligopeptidases; dipeptidyl carboxypeptidase II 1953912..1955957 Escherichia coli UM146 12700361 YP_006110756.1 CDS UM146_09305 NC_017632.1 1956046 1956198 R hypothetical protein complement(1956046..1956198) Escherichia coli UM146 12700362 YP_006110757.1 CDS UM146_09310 NC_017632.1 1956465 1957355 D COG2199 FOG: GGDEF domain; hypothetical protein 1956465..1957355 Escherichia coli UM146 12700363 YP_006110758.1 CDS UM146_09315 NC_017632.1 1957574 1957669 R hypothetical protein complement(1957574..1957669) Escherichia coli UM146 12700364 YP_006110759.1 CDS UM146_09320 NC_017632.1 1957796 1958983 R COG0477 Permeases of the major facilitator superfamily; putative MFS-type transporter YdeE complement(1957796..1958983) Escherichia coli UM146 12700365 YP_006110760.1 CDS UM146_09325 NC_017632.1 1959178 1960077 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; O-acetylserine/cysteine export protein 1959178..1960077 Escherichia coli UM146 12700366 YP_006110761.1 CDS UM146_09330 NC_017632.1 1960122 1960820 R COG2188 Transcriptional regulators; putative transcriptional regulator complement(1960122..1960820) Escherichia coli UM146 12700367 YP_006110762.1 CDS UM146_09335 NC_017632.1 1961019 1961330 D COG1440 Phosphotransferase system cellobiose-specific component IIB; putative cellobiose-specific phosphotransferase enzyme IIB component 1961019..1961330 Escherichia coli UM146 12700368 YP_006110763.1 CDS UM146_09340 NC_017632.1 1961445 1962767 D COG1455 Phosphotransferase system cellobiose-specific component IIC; putative phosphotransferase system IIC component 1961445..1962767 Escherichia coli UM146 12700369 YP_006110764.1 CDS UM146_09345 NC_017632.1 1962795 1963106 D COG1447 Phosphotransferase system cellobiose-specific component IIA; putative phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit 1962795..1963106 Escherichia coli UM146 12700370 YP_006110765.1 CDS UM146_09350 NC_017632.1 1963161 1964834 D COG0789 Predicted transcriptional regulators; putative carbohydrate-specific outer membrane porin 1963161..1964834 Escherichia coli UM146 12700371 YP_006110766.1 CDS celA NC_017632.1 1964858 1966297 D COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; 6-phospho-beta-glucosidase 1964858..1966297 Escherichia coli UM146 12700372 YP_006110767.1 CDS UM146_09360 NC_017632.1 1966354 1966572 R hypothetical protein complement(1966354..1966572) Escherichia coli UM146 12700373 YP_006110768.1 CDS UM146_09365 NC_017632.1 1966604 1966987 R COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator MarA complement(1966604..1966987) Escherichia coli UM146 12700374 YP_006110769.1 CDS UM146_09370 NC_017632.1 1967008 1967442 R COG1846 Transcriptional regulators; DNA-binding transcriptional repressor MarR complement(1967008..1967442) Escherichia coli UM146 12700375 YP_006110770.1 CDS UM146_09375 NC_017632.1 1967654 1968319 D COG2095 Multiple antibiotic transporter; multiple drug resistance protein MarC 1967654..1968319 Escherichia coli UM146 12700376 YP_006110771.1 CDS UM146_09380 NC_017632.1 1968344 1969534 R COG2814 Arabinose efflux permease; sugar efflux transporter complement(1968344..1969534) Escherichia coli UM146 12700377 YP_006110772.1 CDS UM146_09385 NC_017632.1 1969873 1970754 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1969873..1970754) Escherichia coli UM146 12700378 YP_006110773.1 CDS UM146_09390 NC_017632.1 1970855 1972243 D COG1012 NAD-dependent aldehyde dehydrogenases; putative succinate-semialdehyde dehydrogenase 1970855..1972243 Escherichia coli UM146 12700379 YP_006110774.1 CDS UM146_09395 NC_017632.1 1972307 1973233 D COG2066 Glutaminase; glutaminase 1972307..1973233 Escherichia coli UM146 12700380 YP_006110775.1 CDS UM146_09400 NC_017632.1 1973233 1973592 D hypothetical protein 1973233..1973592 Escherichia coli UM146 12700381 YP_006110776.1 CDS UM146_09405 NC_017632.1 1973731 1975149 D COG2199 FOG: GGDEF domain; putative membrane-associated diguanylate cyclase (GGDEF domain) 1973731..1975149 Escherichia coli UM146 12700382 YP_006110777.1 CDS UM146_09410 NC_017632.1 1975376 1976827 D COG0246 Mannitol-1-phosphate/altronate dehydrogenases; altronate oxidoreductase 1975376..1976827 Escherichia coli UM146 12700383 YP_006110778.1 CDS UM146_09415 NC_017632.1 1977024 1977938 D COG3781 Predicted membrane protein; hypothetical protein 1977024..1977938 Escherichia coli UM146 12700384 YP_006110779.1 CDS UM146_09420 NC_017632.1 1977942 1978700 R COG4106 Trans-aconitate methyltransferase; trans-aconitate 2-methyltransferase complement(1977942..1978700) Escherichia coli UM146 12700385 YP_006110780.1 CDS UM146_09425 NC_017632.1 1979008 1979274 D COG1396 Predicted transcriptional regulators; DNA-binding transcriptional regulator HipB 1979008..1979274 Escherichia coli UM146 12700386 YP_006110781.1 CDS UM146_09430 NC_017632.1 1979274 1980560 D COG3550 Uncharacterized protein related to capsule biosynthesis enzymes; regulator with HipB 1979274..1980560 Escherichia coli UM146 12700387 YP_006110782.1 CDS UM146_09435 NC_017632.1 1980781 1981260 R hypothetical protein complement(1980781..1981260) Escherichia coli UM146 12700388 YP_006110783.1 CDS UM146_09440 NC_017632.1 1981260 1981535 R COG2051 Ribosomal protein S27E; hypothetical protein complement(1981260..1981535) Escherichia coli UM146 12700389 YP_006110784.1 CDS UM146_09445 NC_017632.1 1981564 1981986 R hypothetical protein complement(1981564..1981986) Escherichia coli UM146 12700390 YP_006110785.1 CDS UM146_09450 NC_017632.1 1982075 1982257 R hypothetical protein complement(1982075..1982257) Escherichia coli UM146 12700391 YP_006110786.1 CDS UM146_09455 NC_017632.1 1982427 1983479 D hypothetical protein 1982427..1983479 Escherichia coli UM146 12700392 YP_006110787.1 CDS UM146_09460 NC_017632.1 1983491 1983808 D hypothetical protein 1983491..1983808 Escherichia coli UM146 12700393 YP_006110788.1 CDS UM146_09465 NC_017632.1 1984012 1984254 D hypothetical protein 1984012..1984254 Escherichia coli UM146 12700394 YP_006110789.1 CDS UM146_09470 NC_017632.1 1984472 1985593 D hypothetical protein 1984472..1985593 Escherichia coli UM146 12700395 YP_006110790.1 CDS UM146_09475 NC_017632.1 1985593 1985934 D hypothetical protein 1985593..1985934 Escherichia coli UM146 12700396 YP_006110791.1 CDS UM146_09480 NC_017632.1 1986067 1987029 D hypothetical protein 1986067..1987029 Escherichia coli UM146 12700397 YP_006110792.1 CDS UM146_09485 NC_017632.1 1987037 1988302 D COG1450 Type II secretory pathway, component PulD; general secretion pathway protein D 1987037..1988302 Escherichia coli UM146 12700398 YP_006110793.1 CDS UM146_09490 NC_017632.1 1988372 1988680 D hypothetical protein 1988372..1988680 Escherichia coli UM146 12700399 YP_006110794.1 CDS UM146_09495 NC_017632.1 1988798 1989031 D hypothetical protein 1988798..1989031 Escherichia coli UM146 12700400 YP_006110795.1 CDS UM146_09500 NC_017632.1 1989384 1989536 R hypothetical protein complement(1989384..1989536) Escherichia coli UM146 12700401 YP_006110796.1 CDS UM146_09505 NC_017632.1 1989617 1990399 D COG0702 Predicted nucleoside-diphosphate-sugar epimerases; hypothetical protein 1989617..1990399 Escherichia coli UM146 12700402 YP_006110797.1 CDS UM146_09510 NC_017632.1 1990525 1990647 D hypothetical protein 1990525..1990647 Escherichia coli UM146 12700403 YP_006110798.1 CDS UM146_09515 NC_017632.1 1991175 1991738 D COG3539 P pilus assembly protein, pilin FimA; putative major fimbrial subunit FmlA 1991175..1991738 Escherichia coli UM146 12700404 YP_006110799.1 CDS UM146_09520 NC_017632.1 1992091 1992810 D COG3121 P pilus assembly protein, chaperone PapD; chaperone protein fimC precursor 1992091..1992810 Escherichia coli UM146 12700405 YP_006110800.1 CDS UM146_09525 NC_017632.1 1992852 1995503 D COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein FimD 1992852..1995503 Escherichia coli UM146 12700406 YP_006110801.1 CDS UM146_09530 NC_017632.1 1995517 1996047 D COG3539 P pilus assembly protein, pilin FimA; fimbrial-like adhesin protein 1995517..1996047 Escherichia coli UM146 12700407 YP_006110802.1 CDS UM146_09535 NC_017632.1 1996060 1996563 D COG3539 P pilus assembly protein, pilin FimA; fimbrial-like adhesin protein 1996060..1996563 Escherichia coli UM146 12700408 YP_006110803.1 CDS UM146_09540 NC_017632.1 1996623 1997537 D putative Fml fimbrial adhesin FmlD precursor 1996623..1997537 Escherichia coli UM146 12700409 YP_006110804.1 CDS UM146_09545 NC_017632.1 1997875 2000154 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; putative oxidoreductase 1997875..2000154 Escherichia coli UM146 12700410 YP_006110805.1 CDS UM146_09550 NC_017632.1 2000402 2000599 D hypothetical protein 2000402..2000599 Escherichia coli UM146 12700411 YP_006110806.1 CDS UM146_09555 NC_017632.1 2000674 2001435 D COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional regulator YdeO 2000674..2001435 Escherichia coli UM146 12700412 YP_006110807.1 CDS UM146_09560 NC_017632.1 2001837 2003519 D COG3119 Arylsulfatase A and related enzymes; putative sulfatase 2001837..2003519 Escherichia coli UM146 12700413 YP_006110808.1 CDS UM146_09565 NC_017632.1 2003571 2004728 D COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); hypothetical protein 2003571..2004728 Escherichia coli UM146 12700414 YP_006110809.1 CDS UM146_09570 NC_017632.1 2005006 2005125 R hypothetical protein complement(2005006..2005125) Escherichia coli UM146 12700415 YP_006110810.1 CDS UM146_09575 NC_017632.1 2005112 2006704 D COG4178 ABC-type uncharacterized transport system, permease and ATPase components; putative multidrug transporter fused subunits of ABC superfamily transporter: permease component; ATP-binding component 2005112..2006704 Escherichia coli UM146 12700416 YP_006110811.1 CDS UM146_09580 NC_017632.1 2006742 2009114 D COG1629 Outer membrane receptor proteins, mostly Fe transport; hypothetical protein 2006742..2009114 Escherichia coli UM146 12700417 YP_006110812.1 CDS UM146_09585 NC_017632.1 2009171 2011954 D COG0612 Predicted Zn-dependent peptidases; putative membrane-associated peptidase 2009171..2011954 Escherichia coli UM146 12700418 YP_006110813.1 CDS UM146_09590 NC_017632.1 2012161 2012304 D hypothetical protein 2012161..2012304 Escherichia coli UM146 12700419 YP_006110814.1 CDS UM146_09595 NC_017632.1 2012315 2013715 D COG0076 Glutamate decarboxylase and related PLP-dependent proteins; glutamate decarboxylase 2012315..2013715 Escherichia coli UM146 12700420 YP_006110815.1 CDS UM146_09600 NC_017632.1 2013871 2015406 D COG0531 Amino acid transporters; glutamate:gamma-aminobutyric acid antiporter 2013871..2015406 Escherichia coli UM146 12700421 YP_006110816.1 CDS UM146_09605 NC_017632.1 2015702 2016856 D COG1649 Uncharacterized protein conserved in bacteria; putative lipoprotein 2015702..2016856 Escherichia coli UM146 12700422 YP_006110817.1 CDS UM146_09610 NC_017632.1 2017180 2017398 D COG2199 FOG: GGDEF domain; diguanylate cyclase 2017180..2017398 Escherichia coli UM146 12700423 YP_006110818.1 CDS UM146_09615 NC_017632.1 2017423 2019822 D COG2202 FOG: PAS/PAC domain; cAMP phosphodiesterase 2017423..2019822 Escherichia coli UM146 12700424 YP_006110819.1 CDS UM146_09620 NC_017632.1 2020012 2020443 R COG1764 Predicted redox protein, regulator of disulfide bond formation; osmotically inducible, stress-inducible membrane protein complement(2020012..2020443) Escherichia coli UM146 12700425 YP_006110820.1 CDS UM146_09625 NC_017632.1 2020788 2021003 D biofilm-dependent modulation protein 2020788..2021003 Escherichia coli UM146 12700426 YP_006110821.1 CDS rpsV NC_017632.1 2021105 2021242 D 30S ribosomal subunit S22 2021105..2021242 Escherichia coli UM146 12700427 YP_006110822.1 CDS UM146_09635 NC_017632.1 2021398 2023095 D COG0281 Malic enzyme; malate dehydrogenase 2021398..2023095 Escherichia coli UM146 12700428 YP_006110823.1 CDS UM146_09640 NC_017632.1 2023229 2024239 D COG1064 Zn-dependent alcohol dehydrogenases; alcohol dehydrogenase 2023229..2024239 Escherichia coli UM146 12700429 YP_006110824.1 CDS UM146_09645 NC_017632.1 2024425 2024703 D COG3549 Plasmid maintenance system killer protein; hypothetical protein 2024425..2024703 Escherichia coli UM146 12700430 YP_006110825.1 CDS UM146_09650 NC_017632.1 2024703 2024987 D COG3093 Plasmid maintenance system antidote protein; DNA-binding transcriptional regulator 2024703..2024987 Escherichia coli UM146 12700431 YP_006110826.1 CDS UM146_09655 NC_017632.1 2025216 2025869 R COG2864 Cytochrome b subunit of formate dehydrogenase; formate dehydrogenase-N subunit gamma complement(2025216..2025869) Escherichia coli UM146 12700432 YP_006110827.1 CDS UM146_09660 NC_017632.1 2025862 2026746 R COG0437 Fe-S-cluster-containing hydrogenase components 1; formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible complement(2025862..2026746) Escherichia coli UM146 12700433 YP_006110828.1 CDS UM146_09665 NC_017632.1 2026759 2029170 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-N subunit alpha, nitrate-inducible complement(2026759..2029170) Escherichia coli UM146 12700434 YP_006110829.1 CDS UM146_09670 NC_017632.1 2029219 2029806 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase N subunit nitrate-inducible subunit alpha complement(2029219..2029806) Escherichia coli UM146 12700435 YP_006110830.1 CDS UM146_09675 NC_017632.1 2030095 2030919 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 2030095..2030919 Escherichia coli UM146 12700436 YP_006110831.1 CDS UM146_09680 NC_017632.1 2031191 2032579 D COG2223 Nitrate/nitrite transporter; nitrite extrusion protein 2 2031191..2032579 Escherichia coli UM146 12700437 YP_006110832.1 CDS UM146_09685 NC_017632.1 2032674 2036414 D COG5013 Nitrate reductase alpha subunit; respiratory nitrate reductase 2 alpha chain 2032674..2036414 Escherichia coli UM146 12700438 YP_006110833.1 CDS UM146_09690 NC_017632.1 2036411 2037955 D COG1140 Nitrate reductase beta subunit; nitrate reductase 2 (NRZ), beta subunit 2036411..2037955 Escherichia coli UM146 12700439 YP_006110834.1 CDS UM146_09695 NC_017632.1 2037955 2038650 D COG2180 Nitrate reductase delta subunit; nitrate reductase 2 (NRZ), delta subunit (assembly subunit) 2037955..2038650 Escherichia coli UM146 12700440 YP_006110835.1 CDS UM146_09700 NC_017632.1 2038647 2039327 D COG2181 Nitrate reductase gamma subunit; nitrate reductase 2 (NRZ), gamma subunit 2038647..2039327 Escherichia coli UM146 12700441 YP_006110836.1 CDS UM146_09705 NC_017632.1 2039407 2040300 D COG0384 Predicted epimerase, PhzC/PhzF homolog; hypothetical protein 2039407..2040300 Escherichia coli UM146 12700442 YP_006110837.1 CDS UM146_09710 NC_017632.1 2040396 2041241 R COG2162 Arylamine N-acetyltransferase; N-hydroxyarylamine O-acetyltransferase complement(2040396..2041241) Escherichia coli UM146 12700443 YP_006110838.1 CDS UM146_09715 NC_017632.1 2041416 2041985 D COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; hypothetical protein 2041416..2041985 Escherichia coli UM146 12700444 YP_006110839.1 CDS UM146_09720 NC_017632.1 2042302 2042517 R hypothetical protein complement(2042302..2042517) Escherichia coli UM146 12700445 YP_006110840.1 CDS UM146_09725 NC_017632.1 2042595 2042738 R COG5433 Transposase; H repeat-containing Rhs element protein complement(2042595..2042738) Escherichia coli UM146 12700446 YP_006110841.1 CDS UM146_09740 NC_017632.1 2043688 2044449 R putative zinc-dependent metallopeptidase complement(2043688..2044449) Escherichia coli UM146 12700447 YP_006110842.1 CDS UM146_09745 NC_017632.1 2044495 2046843 R COG3501 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2044495..2046843) Escherichia coli UM146 12700448 YP_006110843.1 CDS UM146_09750 NC_017632.1 2046862 2047146 R COG4104 Uncharacterized conserved protein; hypothetical protein complement(2046862..2047146) Escherichia coli UM146 12700449 YP_006110844.1 CDS UM146_09755 NC_017632.1 2047687 2048097 R COG0625 Glutathione S-transferase; hypothetical protein complement(2047687..2048097) Escherichia coli UM146 12700450 YP_006110845.1 CDS UM146_09760 NC_017632.1 2048111 2048287 R COG0625 Glutathione S-transferase; glutathione S-transferase-like protein complement(2048111..2048287) Escherichia coli UM146 12700451 YP_006110846.1 CDS UM146_09765 NC_017632.1 2048554 2050053 D COG1113 Gamma-aminobutyrate permease and related permeases; L-asparagine permease 2048554..2050053 Escherichia coli UM146 12700452 YP_006110847.1 CDS UM146_09770 NC_017632.1 2050166 2051227 R COG3391 Uncharacterized conserved protein; hypothetical protein complement(2050166..2051227) Escherichia coli UM146 12700453 YP_006110848.1 CDS UM146_09775 NC_017632.1 2051469 2053571 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron outer membrane transporter 2051469..2053571 Escherichia coli UM146 12700454 YP_006110849.1 CDS UM146_09780 NC_017632.1 2053609 2053845 R hypothetical protein complement(2053609..2053845) Escherichia coli UM146 12700455 YP_006110850.1 CDS UM146_09785 NC_017632.1 2054052 2054570 D COG1247 Sortase and related acyltransferases; putative acyl-CoA N-acyltransferase 2054052..2054570 Escherichia coli UM146 12700456 YP_006110851.1 CDS UM146_09790 NC_017632.1 2054567 2055016 D COG3238 Uncharacterized protein conserved in bacteria; inner membrane protein YdcZ 2054567..2055016 Escherichia coli UM146 12700457 YP_006110852.1 CDS UM146_09795 NC_017632.1 2055017 2055250 R hypothetical protein complement(2055017..2055250) Escherichia coli UM146 12700458 YP_006110853.1 CDS UM146_09800 NC_017632.1 2055336 2055545 R hypothetical protein complement(2055336..2055545) Escherichia coli UM146 12700459 YP_006110854.1 CDS UM146_09805 NC_017632.1 2055895 2057319 R COG1012 NAD-dependent aldehyde dehydrogenases; gamma-aminobutyraldehyde dehydrogenase complement(2055895..2057319) Escherichia coli UM146 12700460 YP_006110855.1 CDS UM146_09810 NC_017632.1 2057341 2058135 R COG1177 ABC-type spermidine/putrescine transport system, permease component II; inner membrane ABC transporter permease protein ydcV complement(2057341..2058135) Escherichia coli UM146 12700461 YP_006110856.1 CDS UM146_09815 NC_017632.1 2058125 2059066 R COG1176 ABC-type spermidine/putrescine transport system, permease component I; putative spermidine/putrescine transporter subunit ; permease of ABC superfamily transporter complement(2058125..2059066) Escherichia coli UM146 12700462 YP_006110857.1 CDS UM146_09820 NC_017632.1 2059067 2060080 R COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; ABC transporter ATP-binding protein complement(2059067..2060080) Escherichia coli UM146 12700463 YP_006110858.1 CDS UM146_09825 NC_017632.1 2060098 2061243 R COG0687 Spermidine/putrescine-binding periplasmic protein; putative spermidine/putrescine transporter subunit ; periplasmic-binding component of ABC superfamily protein complement(2060098..2061243) Escherichia coli UM146 12700464 YP_006110859.1 CDS UM146_09830 NC_017632.1 2061488 2062894 R COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; putative DNA-binding transcriptional regulator fused with a domain with PLP-binding motif complement(2061488..2062894) Escherichia coli UM146 12700465 YP_006110860.1 CDS UM146_09835 NC_017632.1 2063387 2063617 D hypothetical protein 2063387..2063617 Escherichia coli UM146 12700466 YP_006110861.1 CDS UM146_09840 NC_017632.1 2063709 2065670 R COG0826 Collagenase and related proteases; putative protease YdcP precursor complement(2063709..2065670) Escherichia coli UM146 12700467 YP_006110862.1 CDS UM146_09845 NC_017632.1 2065743 2066279 R COG1396 Predicted transcriptional regulators; putative DNA-binding transcriptional regulator complement(2065743..2066279) Escherichia coli UM146 12700468 YP_006110863.1 CDS UM146_09860 NC_017632.1 2067577 2068245 R putative lipoprotein complement(2067577..2068245) Escherichia coli UM146 12700469 YP_006110864.1 CDS UM146_09865 NC_017632.1 2068548 2069141 R COG0500 SAM-dependent methyltransferases; tellurite resistance protein TehB complement(2068548..2069141) Escherichia coli UM146 12700470 YP_006110865.1 CDS UM146_09870 NC_017632.1 2069138 2070130 R COG1275 Tellurite resistance protein and related permeases; potassium-tellurite ethidium and proflavin transporter complement(2069138..2070130) Escherichia coli UM146 12700471 YP_006110866.1 CDS UM146_09875 NC_017632.1 2070254 2071234 D COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); hypothetical protein 2070254..2071234 Escherichia coli UM146 12700472 YP_006110867.1 CDS UM146_09880 NC_017632.1 2071226 2071765 R COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; ribosomal-protein-L7/L12-serine acetyltransferase complement(2071226..2071765) Escherichia coli UM146 12700473 YP_006110868.1 CDS UM146_09885 NC_017632.1 2071828 2072052 R COG2841 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2071828..2072052) Escherichia coli UM146 12700474 YP_006110869.1 CDS UM146_09890 NC_017632.1 2072068 2072271 D hypothetical protein 2072068..2072271 Escherichia coli UM146 12700475 YP_006110870.1 CDS mdoD NC_017632.1 2072192 2073811 R COG3131 Periplasmic glucans biosynthesis protein; glucan biosynthesis protein D complement(2072192..2073811) Escherichia coli UM146 12700476 YP_006110871.1 CDS UM146_09900 NC_017632.1 2074072 2075415 R COG5383 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2074072..2075415) Escherichia coli UM146 12700477 YP_006110872.1 CDS UM146_09905 NC_017632.1 2075632 2076555 D COG0583 Transcriptional regulator; putative transcriptional regulator YdcI 2075632..2076555 Escherichia coli UM146 12700478 YP_006110873.1 CDS UM146_09910 NC_017632.1 2076593 2077048 R COG0840 Methyl-accepting chemotaxis protein; hypothetical protein complement(2076593..2077048) Escherichia coli UM146 12700479 YP_006110874.1 CDS UM146_09915 NC_017632.1 2077221 2077394 R hypothetical protein complement(2077221..2077394) Escherichia coli UM146 12700480 YP_006110875.1 CDS UM146_09920 NC_017632.1 2077639 2078205 R COG3038 Cytochrome B561; cytochrome b561 complement(2077639..2078205) Escherichia coli UM146 12700481 YP_006110876.1 CDS UM146_09925 NC_017632.1 2078358 2079359 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2078358..2079359 Escherichia coli UM146 12700482 YP_006110877.1 CDS UM146_09930 NC_017632.1 2079401 2080840 R COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase A complement(2079401..2080840) Escherichia coli UM146 12700483 YP_006110878.1 CDS UM146_09935 NC_017632.1 2081037 2081837 R COG1434 Uncharacterized conserved protein; hypothetical protein complement(2081037..2081837) Escherichia coli UM146 12700484 YP_006110879.1 CDS UM146_09940 NC_017632.1 2082110 2086012 R COG1643 HrpA-like helicases; ATP-dependent RNA helicase HrpA complement(2082110..2086012) Escherichia coli UM146 12700485 YP_006110880.1 CDS UM146_09945 NC_017632.1 2086213 2086818 D COG1182 Acyl carrier protein phosphodiesterase; azoreductase 2086213..2086818 Escherichia coli UM146 12700486 YP_006110881.1 CDS UM146_09950 NC_017632.1 2086872 2088140 R COG0671 Membrane-associated phospholipid phosphatase; putative membrane associated phosphatase complement(2086872..2088140) Escherichia coli UM146 12700487 YP_006110882.1 CDS UM146_09955 NC_017632.1 2088178 2089935 R COG2267 Lysophospholipase; putative hydrolase complement(2088178..2089935) Escherichia coli UM146 12700488 YP_006110883.1 CDS UM146_09960 NC_017632.1 2089951 2090847 R COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; putative membrane associated CTP-phosphosubstrate transferase complement(2089951..2090847) Escherichia coli UM146 12700489 YP_006110884.1 CDS UM146_09965 NC_017632.1 2090847 2091452 R COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthase complement(2090847..2091452) Escherichia coli UM146 12700490 YP_006110885.1 CDS UM146_09970 NC_017632.1 2091751 2092611 R COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); putative oxidoreductase complement(2091751..2092611) Escherichia coli UM146 12700491 YP_006110886.1 CDS UM146_09995 NC_017632.1 2099915 2100241 R COG3784 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2099915..2100241) Escherichia coli UM146 12700492 YP_006110887.1 CDS UM146_10000 NC_017632.1 2100249 2100434 R putative lipoprotein complement(2100249..2100434) Escherichia coli UM146 12700493 YP_006110888.1 CDS UM146_10005 NC_017632.1 2100431 2103070 R hypothetical protein complement(2100431..2103070) Escherichia coli UM146 12700494 YP_006110889.1 CDS UM146_10010 NC_017632.1 2103278 2104267 D COG1052 Lactate dehydrogenase and related dehydrogenases; D-lactate dehydrogenase 2103278..2104267 Escherichia coli UM146 12700495 YP_006110890.1 CDS UM146_10015 NC_017632.1 2104378 2104800 D COG3187 Heat shock protein; heat-inducible protein 2104378..2104800 Escherichia coli UM146 12700496 YP_006110891.1 CDS UM146_10020 NC_017632.1 2104797 2105063 R COG3042 Putative hemolysin; putative cytoplasmic protein complement(2104797..2105063) Escherichia coli UM146 12700497 YP_006110892.1 CDS UM146_10025 NC_017632.1 2104826 2105266 D hypothetical protein 2104826..2105266 Escherichia coli UM146 12700498 YP_006110893.1 CDS UM146_10030 NC_017632.1 2105337 2108861 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; putative 2-oxoacid-flavodoxin fused oxidoreductase 2105337..2108861 Escherichia coli UM146 12700499 YP_006110894.1 CDS UM146_10035 NC_017632.1 2109227 2110360 D COG3203 Outer membrane protein (porin); outer membrane pore protein N, non-specific 2109227..2110360 Escherichia coli UM146 12700500 YP_006110895.1 CDS UM146_10040 NC_017632.1 2110501 2110935 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; Universal stress protein F 2110501..2110935 Escherichia coli UM146 12700501 YP_006110896.1 CDS UM146_10045 NC_017632.1 2111172 2111393 D COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; hypothetical protein 2111172..2111393 Escherichia coli UM146 12700502 YP_006110897.1 CDS UM146_10050 NC_017632.1 2113069 2113209 D COG0582 Integrase; putative integrase 2113069..2113209 Escherichia coli UM146 12700503 YP_006110898.1 CDS UM146_10055 NC_017632.1 2113261 2114196 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; C32 tRNA thiolase 2113261..2114196 Escherichia coli UM146 12700504 YP_006110899.1 CDS UM146_10060 NC_017632.1 2114325 2115698 R COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase DbpA complement(2114325..2115698) Escherichia coli UM146 12700505 YP_006110900.1 CDS zntB NC_017632.1 2116176 2117159 R COG0598 Mg2+ and Co2+ transporters; zinc transporter complement(2116176..2117159) Escherichia coli UM146 12700506 YP_006110901.1 CDS UM146_10070 NC_017632.1 2117354 2118646 D COG2199 FOG: GGDEF domain; hypothetical protein 2117354..2118646 Escherichia coli UM146 12700507 YP_006110902.1 CDS UM146_10075 NC_017632.1 2118667 2119230 R COG2840 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2118667..2119230) Escherichia coli UM146 12700508 YP_006110903.1 CDS UM146_10080 NC_017632.1 2119425 2120939 R COG0477 Permeases of the major facilitator superfamily; putative drug resistance transporter EmrB/QacA subfamily protein complement(2119425..2120939) Escherichia coli UM146 12700509 YP_006110904.1 CDS UM146_10085 NC_017632.1 2120936 2121964 R COG1566 Multidrug resistance efflux pump; Putative HlyD family secretion protein complement(2120936..2121964) Escherichia coli UM146 12700510 YP_006110905.1 CDS UM146_10090 NC_017632.1 2122061 2122876 D COG2207 AraC-type DNA-binding domain-containing proteins; Putative HTH-type transcriptional regulator 2122061..2122876 Escherichia coli UM146 12700511 YP_006110906.1 CDS UM146_10095 NC_017632.1 2123248 2123397 D hypothetical protein 2123248..2123397 Escherichia coli UM146 12700512 YP_006110907.1 CDS UM146_10100 NC_017632.1 2123408 2123923 D COG0350 Methylated DNA-protein cysteine methyltransferase; O-6-alkylguanine-DNA:cysteine-protein methyltransferase 2123408..2123923 Escherichia coli UM146 12700513 YP_006110908.1 CDS UM146_10105 NC_017632.1 2124118 2124870 D COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; fumarate/nitrate reduction transcriptional regulator 2124118..2124870 Escherichia coli UM146 12700514 YP_006110909.1 CDS UM146_10110 NC_017632.1 2125022 2125972 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspE 2125022..2125972 Escherichia coli UM146 12700515 YP_006110910.1 CDS UM146_10115 NC_017632.1 2126022 2126279 R hypothetical protein complement(2126022..2126279) Escherichia coli UM146 12700516 YP_006110911.1 CDS UM146_10120 NC_017632.1 2126523 2127554 D COG0668 Small-conductance mechanosensitive channel; MscS family inner membrane protein ynaI 2126523..2127554 Escherichia coli UM146 12700517 YP_006110912.1 CDS UM146_10125 NC_017632.1 2127605 2129218 R COG4166 ABC-type oligopeptide transport system, periplasmic component; periplasmic murein peptide-binding protein complement(2127605..2129218) Escherichia coli UM146 12700518 YP_006110913.1 CDS UM146_10130 NC_017632.1 2129555 2130454 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2129555..2130454) Escherichia coli UM146 12700519 YP_006110914.1 CDS UM146_10135 NC_017632.1 2130595 2131512 D COG1073 Hydrolases of the alpha/beta superfamily; putative hydrolase 2130595..2131512 Escherichia coli UM146 12700520 YP_006110915.1 CDS UM146_10140 NC_017632.1 2131583 2132221 D COG0702 Predicted nucleoside-diphosphate-sugar epimerases; putative NAD(P) binding enzyme 2131583..2132221 Escherichia coli UM146 12700521 YP_006110916.1 CDS UM146_10145 NC_017632.1 2132512 2133240 D COG3608 Predicted deacylase; murein peptide amidase A 2132512..2133240 Escherichia coli UM146 12700522 YP_006110917.1 CDS UM146_10150 NC_017632.1 2133215 2134180 R COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; L-Ala-D/L-Glu epimerase complement(2133215..2134180) Escherichia coli UM146 12700523 YP_006110918.1 CDS tpx NC_017632.1 2134299 2134805 D COG2077 Peroxiredoxin; thiol peroxidase 2134299..2134805 Escherichia coli UM146 12700524 YP_006110919.1 CDS UM146_10160 NC_017632.1 2134849 2136390 R COG3283 Transcriptional regulator of aromatic amino acids metabolism; DNA-binding transcriptional regulator TyrR complement(2134849..2136390) Escherichia coli UM146 12700525 YP_006110920.1 CDS UM146_10165 NC_017632.1 2136538 2137599 R COG3768 Predicted membrane protein; hypothetical protein complement(2136538..2137599) Escherichia coli UM146 12700526 YP_006110921.1 CDS UM146_10170 NC_017632.1 2137596 2138993 R COG3106 Predicted ATPase; hypothetical protein complement(2137596..2138993) Escherichia coli UM146 12700527 YP_006110922.1 CDS UM146_10175 NC_017632.1 2139149 2140147 D COG1609 Transcriptional regulators; putative DNA-binding transcriptional regulator 2139149..2140147 Escherichia coli UM146 12700528 YP_006110923.1 CDS UM146_10180 NC_017632.1 2140198 2141103 R outer membrane protein G complement(2140198..2141103) Escherichia coli UM146 12700529 YP_006110924.1 CDS UM146_10185 NC_017632.1 2141148 2142230 R COG3839 ABC-type sugar transport systems, ATPase components; putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter complement(2141148..2142230) Escherichia coli UM146 12700530 YP_006110925.1 CDS UM146_10190 NC_017632.1 2142244 2142903 R COG0637 Predicted phosphatase/phosphohexomutase; putative glucose-1-phosphate phosphodismutase, beta-phosphoglucomutase complement(2142244..2142903) Escherichia coli UM146 12700531 YP_006110926.1 CDS UM146_10195 NC_017632.1 2142900 2145167 R COG1554 Trehalose and maltose hydrolases (possible phosphorylases); putative glycosyl hydrolase/phosphorylase complement(2142900..2145167) Escherichia coli UM146 12700532 YP_006110927.1 CDS UM146_10200 NC_017632.1 2145164 2146207 R COG0673 Predicted dehydrogenases and related proteins; putative oxidoreductase, NADH-binding protein complement(2145164..2146207) Escherichia coli UM146 12700533 YP_006110928.1 CDS UM146_10205 NC_017632.1 2146229 2147017 R COG1082 Sugar phosphate isomerases/epimerases; hypothetical protein complement(2146229..2147017) Escherichia coli UM146 12700534 YP_006110929.1 CDS UM146_10210 NC_017632.1 2147036 2148088 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; oxidoreductase, Zn-dependent and NAD(P)-binding protein complement(2147036..2148088) Escherichia coli UM146 12700535 YP_006110930.1 CDS UM146_10215 NC_017632.1 2148119 2148961 R COG0395 ABC-type sugar transport system, permease component; putative sugar transporter subunit: permease component of ABC superfamily transporter complement(2148119..2148961) Escherichia coli UM146 12700536 YP_006110931.1 CDS UM146_10220 NC_017632.1 2148948 2149829 R COG1175 ABC-type sugar transport systems, permease components; putative sugar transporter subunit: permease component of ABC superfamily transporter complement(2148948..2149829) Escherichia coli UM146 12700537 YP_006110932.1 CDS UM146_10225 NC_017632.1 2149850 2151142 R COG1653 ABC-type sugar transport system, periplasmic component; putative sugar transporter subunit: periplasmic-binding component of ABC superfamily transporter complement(2149850..2151142) Escherichia coli UM146 12700538 YP_006110933.1 CDS UM146_10230 NC_017632.1 2151156 2152835 R COG0366 Glycosidases; putative glucosyltransferase complement(2151156..2152835) Escherichia coli UM146 12700539 YP_006110934.1 CDS UM146_10235 NC_017632.1 2153045 2153359 R COG0607 Rhodanese-related sulfurtransferase; thiosulfate:cyanide sulfurtransferase complement(2153045..2153359) Escherichia coli UM146 12700540 YP_006110935.1 CDS UM146_10240 NC_017632.1 2153434 2153655 R peripheral inner membrane phage-shock protein complement(2153434..2153655) Escherichia coli UM146 12700541 YP_006110936.1 CDS UM146_10245 NC_017632.1 2153664 2154023 R COG1983 Putative stress-responsive transcriptional regulator; DNA-binding transcriptional activator PspC complement(2153664..2154023) Escherichia coli UM146 12700542 YP_006110937.1 CDS pspB NC_017632.1 2154023 2154247 R phage shock protein B complement(2154023..2154247) Escherichia coli UM146 12700543 YP_006110938.1 CDS UM146_10255 NC_017632.1 2154301 2154969 R COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription; phage shock protein PspA complement(2154301..2154969) Escherichia coli UM146 12700544 YP_006110939.1 CDS pspF NC_017632.1 2155135 2156112 D COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; phage shock protein operon transcriptional activator 2155135..2156112 Escherichia coli UM146 12700545 YP_006110940.1 CDS UM146_10265 NC_017632.1 2156539 2156784 D hypothetical protein 2156539..2156784 Escherichia coli UM146 12700546 YP_006110941.1 CDS UM146_10270 NC_017632.1 2157097 2158740 D COG4166 ABC-type oligopeptide transport system, periplasmic component; antimicrobial peptide transporter subunit; periplasmic-binding component of ABC superfamily transporter 2157097..2158740 Escherichia coli UM146 12700547 YP_006110942.1 CDS UM146_10275 NC_017632.1 2158737 2159702 D COG4168 ABC-type antimicrobial peptide transport system, permease component; peptide transport system permease SapB 2158737..2159702 Escherichia coli UM146 12700548 YP_006110943.1 CDS UM146_10280 NC_017632.1 2159689 2160579 D COG4171 ABC-type antimicrobial peptide transport system, permease component; putative peptide transport permease SapC 2159689..2160579 Escherichia coli UM146 12700549 YP_006110944.1 CDS UM146_10285 NC_017632.1 2160579 2161571 D COG4170 ABC-type antimicrobial peptide transport system, ATPase component; Peptide transport system ATP-binding protein sapD 2160579..2161571 Escherichia coli UM146 12700550 YP_006110945.1 CDS UM146_10290 NC_017632.1 2161573 2162379 D COG4167 ABC-type antimicrobial peptide transport system, ATPase component; putative ATP-binding protein SapF of peptide transport system 2161573..2162379 Escherichia coli UM146 12700551 YP_006110946.1 CDS UM146_10295 NC_017632.1 2162427 2163590 R COG0477 Permeases of the major facilitator superfamily; putative membrane transport protein of an efflux system complement(2162427..2163590) Escherichia coli UM146 12700552 YP_006110947.1 CDS UM146_10300 NC_017632.1 2163599 2164972 R COG1538 Outer membrane protein; outer membrane efflux lipoprotein complement(2163599..2164972) Escherichia coli UM146 12700553 YP_006110948.1 CDS UM146_10305 NC_017632.1 2165014 2168082 R COG0841 Cation/multidrug efflux pump; Putative efflux pump (Putative multidrug-efflux transport protein) complement(2165014..2168082) Escherichia coli UM146 12700554 YP_006110949.1 CDS UM146_10310 NC_017632.1 2168082 2169203 R COG0845 Membrane-fusion protein; Putative efflux protein, membrane fusion (MFP) family precursor complement(2168082..2169203) Escherichia coli UM146 12700555 YP_006110950.1 CDS UM146_10315 NC_017632.1 2169352 2169918 R COG1309 Transcriptional regulator; putative transcriptional repressor complement(2169352..2169918) Escherichia coli UM146 12700556 YP_006110951.1 CDS UM146_10320 NC_017632.1 2170396 2171184 D COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-ACP reductase 2170396..2171184 Escherichia coli UM146 12700557 YP_006110952.1 CDS UM146_10325 NC_017632.1 2171329 2172456 D COG2128 Uncharacterized conserved protein; putative amidase or amidotransferase 2171329..2172456 Escherichia coli UM146 12700558 YP_006110953.1 CDS UM146_10330 NC_017632.1 2172524 2174458 D COG4776 Exoribonuclease II; exoribonuclease II 2172524..2174458 Escherichia coli UM146 12700559 YP_006110954.1 CDS UM146_10335 NC_017632.1 2174692 2176677 D COG2199 FOG: GGDEF domain; RNase II stability modulator 2174692..2176677 Escherichia coli UM146 12700560 YP_006110955.1 CDS UM146_10340 NC_017632.1 2176825 2176998 D hypothetical protein 2176825..2176998 Escherichia coli UM146 12700561 YP_006110956.1 CDS UM146_10355 NC_017632.1 2178105 2178323 D lipoprotein 2178105..2178323 Escherichia coli UM146 12700562 YP_006110957.1 CDS UM146_10360 NC_017632.1 2178449 2178775 R COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins; translation initiation factor Sui1 complement(2178449..2178775) Escherichia coli UM146 12700563 YP_006110958.1 CDS UM146_10365 NC_017632.1 2178775 2179572 R COG0284 Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(2178775..2179572) Escherichia coli UM146 12700564 YP_006110959.1 CDS UM146_10370 NC_017632.1 2179702 2180871 R COG2956 Predicted N-acetylglucosaminyl transferase; hypothetical protein complement(2179702..2180871) Escherichia coli UM146 12700565 YP_006110960.1 CDS UM146_10375 NC_017632.1 2180878 2181186 R COG3771 Predicted membrane protein; hypothetical protein complement(2180878..2181186) Escherichia coli UM146 12700566 YP_006110961.1 CDS UM146_10380 NC_017632.1 2181335 2182099 R COG0671 Membrane-associated phospholipid phosphatase; phosphatidylglycerophosphatase B complement(2181335..2182099) Escherichia coli UM146 12700567 YP_006110962.1 CDS ribA NC_017632.1 2182269 2182859 D COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II 2182269..2182859 Escherichia coli UM146 12700568 YP_006110963.1 CDS UM146_10390 NC_017632.1 2182923 2185598 R COG1048 Aconitase A; aconitate hydratase complement(2182923..2185598) Escherichia coli UM146 12700569 YP_006110964.1 CDS UM146_10395 NC_017632.1 2185758 2185883 D hypothetical protein 2185758..2185883 Escherichia coli UM146 12700570 YP_006110965.1 CDS UM146_10400 NC_017632.1 2185957 2186124 R hypothetical protein complement(2185957..2186124) Escherichia coli UM146 12700571 YP_006110966.1 CDS UM146_10405 NC_017632.1 2186127 2186255 R hypothetical protein complement(2186127..2186255) Escherichia coli UM146 12700572 YP_006110967.1 CDS cysB NC_017632.1 2186586 2187560 R COG0583 Transcriptional regulator; transcriptional regulator CysB complement(2186586..2187560) Escherichia coli UM146 12700573 YP_006110968.1 CDS UM146_10415 NC_017632.1 2187770 2190367 R COG0550 Topoisomerase IA; DNA topoisomerase I complement(2187770..2190367) Escherichia coli UM146 12700574 YP_006110969.1 CDS UM146_10420 NC_017632.1 2190747 2190998 D hypothetical protein 2190747..2190998 Escherichia coli UM146 12700575 YP_006110970.1 CDS UM146_10425 NC_017632.1 2191034 2192083 R COG0616 Periplasmic serine proteases (ClpP class); putative periplasmic protease complement(2191034..2192083) Escherichia coli UM146 12700576 YP_006110971.1 CDS UM146_10430 NC_017632.1 2192303 2193061 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 2192303..2193061 Escherichia coli UM146 12700577 YP_006110972.1 CDS UM146_10435 NC_017632.1 2193058 2193648 D COG2109 ATP:corrinoid adenosyltransferase; cob(I)yrinic acid a,c-diamide adenosyltransferase 2193058..2193648 Escherichia coli UM146 12700578 YP_006110973.1 CDS UM146_10440 NC_017632.1 2193687 2194562 R COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 23S rRNA pseudouridylate synthase B complement(2193687..2194562) Escherichia coli UM146 12700579 YP_006110974.1 CDS UM146_10445 NC_017632.1 2194775 2196670 R hypothetical protein complement(2194775..2196670) Escherichia coli UM146 12700580 YP_006110975.1 CDS UM146_10450 NC_017632.1 2196698 2197318 R COG0009 Putative translation factor (SUA5); hypothetical protein complement(2196698..2197318) Escherichia coli UM146 12700581 YP_006110976.1 CDS UM146_10455 NC_017632.1 2197315 2198196 R COG0613 Predicted metal-dependent phosphoesterases (PHP family); hypothetical protein complement(2197315..2198196) Escherichia coli UM146 12700582 YP_006110977.1 CDS UM146_10460 NC_017632.1 2198470 2200032 D COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I 2198470..2200032 Escherichia coli UM146 12700583 YP_006110978.1 CDS UM146_10465 NC_017632.1 2200032 2201627 D COG0512 Anthranilate/para-aminobenzoate synthases component II; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase 2200032..2201627 Escherichia coli UM146 12700584 YP_006110979.1 CDS UM146_10470 NC_017632.1 2201631 2202989 D COG0134 Indole-3-glycerol phosphate synthase; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2201631..2202989 Escherichia coli UM146 12700585 YP_006110980.1 CDS UM146_10475 NC_017632.1 2203001 2204194 D COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta 2203001..2204194 Escherichia coli UM146 12700586 YP_006110981.1 CDS trpA NC_017632.1 2204194 2205000 D COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha 2204194..2205000 Escherichia coli UM146 12700587 YP_006110982.1 CDS UM146_10485 NC_017632.1 2205381 2205560 D COG3729 General stress protein; hypothetical protein 2205381..2205560 Escherichia coli UM146 12700588 YP_006110983.1 CDS UM146_10490 NC_017632.1 2205646 2206146 D COG3685 Uncharacterized protein conserved in bacteria; putative structural protein 2205646..2206146 Escherichia coli UM146 12700589 YP_006110984.1 CDS UM146_10495 NC_017632.1 2206192 2206698 D COG3685 Uncharacterized protein conserved in bacteria; hypothetical protein 2206192..2206698 Escherichia coli UM146 12700590 YP_006110985.1 CDS UM146_10500 NC_017632.1 2206757 2206864 R COG3047 Outer membrane protein W; outer membrane protein W complement(2206757..2206864) Escherichia coli UM146 12700591 YP_006110986.1 CDS UM146_10505 NC_017632.1 2207185 2207355 R putative tail component complement(2207185..2207355) Escherichia coli UM146 12700592 YP_006110987.1 CDS UM146_10510 NC_017632.1 2207470 2207739 R Putative tail fiber assembly protein complement(2207470..2207739) Escherichia coli UM146 12700593 YP_006110988.1 CDS UM146_10515 NC_017632.1 2208032 2208463 D hypothetical protein 2208032..2208463 Escherichia coli UM146 12700594 YP_006110989.1 CDS UM146_10520 NC_017632.1 2208518 2209102 R putative tail fiber chaperone; Qin prophage complement(2208518..2209102) Escherichia coli UM146 12700595 YP_006110990.1 CDS UM146_10525 NC_017632.1 2209102 2212209 R putative tail fiber protein complement(2209102..2212209) Escherichia coli UM146 12700596 YP_006110991.1 CDS UM146_10530 NC_017632.1 2212361 2212960 R Putative Lom-like outer membrane protein of phage origin complement(2212361..2212960) Escherichia coli UM146 12700597 YP_006110992.1 CDS UM146_10535 NC_017632.1 2213028 2216507 R COG4733 Phage-related protein, tail component; putative tail component of prophage complement(2213028..2216507) Escherichia coli UM146 12700598 YP_006110993.1 CDS UM146_10540 NC_017632.1 2216986 2217528 R COG4723 Phage-related protein, tail component; Tail assembly protein I from putative prophage complement(2216986..2217528) Escherichia coli UM146 12700599 YP_006110994.1 CDS UM146_10545 NC_017632.1 2217525 2218124 R COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily; putative tail fiber component K of prophage complement(2217525..2218124) Escherichia coli UM146 12700600 YP_006110995.1 CDS UM146_10550 NC_017632.1 2218273 2218938 R COG4672 Phage-related protein; Minor tail protein L complement(2218273..2218938) Escherichia coli UM146 12700601 YP_006110996.1 CDS UM146_10555 NC_017632.1 2218970 2219299 R COG4718 Phage-related protein; minor tail protein complement(2218970..2219299) Escherichia coli UM146 12700602 YP_006110997.1 CDS UM146_10560 NC_017632.1 2219296 2221869 R COG5281 Phage-related minor tail protein; Minor tail protein precursor H complement(2219296..2221869) Escherichia coli UM146 12700603 YP_006110998.1 CDS UM146_10565 NC_017632.1 2221850 2222239 R tail component complement(2221850..2222239) Escherichia coli UM146 12700604 YP_006110999.1 CDS UM146_10570 NC_017632.1 2222290 2222721 R Minor tail protein G complement(2222290..2222721) Escherichia coli UM146 12700605 YP_006111000.1 CDS UM146_10575 NC_017632.1 2222735 2223487 R COG5492 Bacterial surface proteins containing Ig-like domains; Major tail protein V complement(2222735..2223487) Escherichia coli UM146 12700606 YP_006111001.1 CDS UM146_10580 NC_017632.1 2223495 2223890 R putative minor tail protein complement(2223495..2223890) Escherichia coli UM146 12700607 YP_006111002.1 CDS UM146_10585 NC_017632.1 2223887 2224420 R putative minor tail protein complement(2223887..2224420) Escherichia coli UM146 12700608 YP_006111003.1 CDS UM146_10590 NC_017632.1 2224436 2224789 R Phage Head-Tail Attachment complement(2224436..2224789) Escherichia coli UM146 12700609 YP_006111004.1 CDS UM146_10595 NC_017632.1 2224782 2225165 R hypothetical protein complement(2224782..2225165) Escherichia coli UM146 12700610 YP_006111005.1 CDS UM146_10600 NC_017632.1 2225217 2226245 R putative major capsid protein complement(2225217..2226245) Escherichia coli UM146 12700611 YP_006111006.1 CDS UM146_10605 NC_017632.1 2226303 2226650 R putative head-DNA stabilization protein complement(2226303..2226650) Escherichia coli UM146 12700612 YP_006111007.1 CDS UM146_10610 NC_017632.1 2226687 2228192 R COG0616 Periplasmic serine proteases (ClpP class); Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) complement(2226687..2228192) Escherichia coli UM146 12700613 YP_006111008.1 CDS UM146_10615 NC_017632.1 2228182 2229774 R COG5511 Bacteriophage capsid protein; putative portal protein complement(2228182..2229774) Escherichia coli UM146 12700614 YP_006111009.1 CDS UM146_10620 NC_017632.1 2229771 2229977 R putative head completion protein complement(2229771..2229977) Escherichia coli UM146 12700615 YP_006111010.1 CDS UM146_10625 NC_017632.1 2229961 2231889 R COG5525 Bacteriophage tail assembly protein; putative DNA packaging protein of prophage; terminase large subunit complement(2229961..2231889) Escherichia coli UM146 12700616 YP_006111011.1 CDS UM146_10630 NC_017632.1 2231861 2232409 R COG4220 Phage DNA packaging protein, Nu1 subunit of terminase; prophage Qin DNA packaging protein NU1-like protein complement(2231861..2232409) Escherichia coli UM146 12700617 YP_006111012.1 CDS UM146_10635 NC_017632.1 2233087 2233497 D COG5562 Phage envelope protein; hypothetical protein 2233087..2233497 Escherichia coli UM146 12700618 YP_006111013.1 CDS UM146_10640 NC_017632.1 2233805 2234269 R putative murein endopeptidase; DLP12 prophage complement(2233805..2234269) Escherichia coli UM146 12700619 YP_006111014.1 CDS UM146_10645 NC_017632.1 2234271 2234444 R hypothetical protein complement(2234271..2234444) Escherichia coli UM146 12700620 YP_006111015.1 CDS UM146_10650 NC_017632.1 2234568 2235101 R COG3772 Phage-related lysozyme (muraminidase); putative membrane-associated lysozyme; Qin prophage complement(2234568..2235101) Escherichia coli UM146 12700621 YP_006111016.1 CDS UM146_10655 NC_017632.1 2235207 2235479 D hypothetical protein 2235207..2235479 Escherichia coli UM146 12700622 YP_006111017.1 CDS UM146_10660 NC_017632.1 2235445 2235789 R hypothetical protein complement(2235445..2235789) Escherichia coli UM146 12700623 YP_006111018.1 CDS UM146_10665 NC_017632.1 2235794 2236009 R holin protein complement(2235794..2236009) Escherichia coli UM146 12700624 YP_006111019.1 CDS UM146_10670 NC_017632.1 2236278 2236505 R hypothetical protein complement(2236278..2236505) Escherichia coli UM146 12700625 YP_006111020.1 CDS UM146_10675 NC_017632.1 2237780 2238829 R COG0863 DNA modification methylase; putative DNA adenine methyltransferase ( DNA methylase) from phage origin complement(2237780..2238829) Escherichia coli UM146 12700629 YP_006111021.1 CDS UM146_10680 NC_017632.1 2238980 2239177 R hypothetical protein complement(2238980..2239177) Escherichia coli UM146 12700630 YP_006111022.1 CDS UM146_10685 NC_017632.1 2239722 2240222 R putative antitermination protein Q of prophage complement(2239722..2240222) Escherichia coli UM146 12700631 YP_006111023.1 CDS UM146_10690 NC_017632.1 2240219 2240593 R COG4570 Holliday junction resolvase; putative crossover junction endodeoxyribonuclease rusA (Holliday junction nuclease rusA) (Holliday juction resolvase) complement(2240219..2240593) Escherichia coli UM146 12700632 YP_006111024.1 CDS UM146_10695 NC_017632.1 2240606 2241652 R hypothetical protein complement(2240606..2241652) Escherichia coli UM146 12700633 YP_006111025.1 CDS UM146_10700 NC_017632.1 2242100 2242312 R putative prophage maintenance protein complement(2242100..2242312) Escherichia coli UM146 12700634 YP_006111026.1 CDS UM146_10705 NC_017632.1 2242873 2243874 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein complement(2242873..2243874) Escherichia coli UM146 12700635 YP_006111027.1 CDS UM146_10720 NC_017632.1 2245043 2245465 R hypothetical protein complement(2245043..2245465) Escherichia coli UM146 12700636 YP_006111028.1 CDS UM146_10725 NC_017632.1 2245506 2246576 R hypothetical protein complement(2245506..2246576) Escherichia coli UM146 12700637 YP_006111029.1 CDS UM146_10730 NC_017632.1 2246648 2247073 R COG0383 Alpha-mannosidase; hypothetical protein complement(2246648..2247073) Escherichia coli UM146 12700638 YP_006111030.1 CDS UM146_10735 NC_017632.1 2247057 2247299 R hypothetical protein complement(2247057..2247299) Escherichia coli UM146 12700639 YP_006111031.1 CDS UM146_10740 NC_017632.1 2247391 2248029 D COG1396 Predicted transcriptional regulators; putative repressor protein from phage origin 2247391..2248029 Escherichia coli UM146 12700640 YP_006111032.1 CDS UM146_10745 NC_017632.1 2248241 2248477 D hypothetical protein 2248241..2248477 Escherichia coli UM146 12700641 YP_006111033.1 CDS UM146_10750 NC_017632.1 2248479 2248607 D hypothetical protein 2248479..2248607 Escherichia coli UM146 12700642 YP_006111034.1 CDS UM146_10755 NC_017632.1 2248637 2248858 D hypothetical protein 2248637..2248858 Escherichia coli UM146 12700643 YP_006111035.1 CDS UM146_10760 NC_017632.1 2249424 2249612 D putative regulator of cell division encoded by prophage 2249424..2249612 Escherichia coli UM146 12700644 YP_006111036.1 CDS UM146_10765 NC_017632.1 2249609 2249800 D hypothetical protein 2249609..2249800 Escherichia coli UM146 12700645 YP_006111037.1 CDS UM146_10770 NC_017632.1 2249893 2252364 D putative exonuclease from phage origin 2249893..2252364 Escherichia coli UM146 12700646 YP_006111038.1 CDS UM146_10775 NC_017632.1 2252429 2252677 D Excisionase 2252429..2252677 Escherichia coli UM146 12700647 YP_006111039.1 CDS UM146_10790 NC_017632.1 2253830 2254468 R COG3047 Outer membrane protein W; outer membrane protein W complement(2253830..2254468) Escherichia coli UM146 12700648 YP_006111040.1 CDS UM146_10795 NC_017632.1 2254824 2255567 D hypothetical protein 2254824..2255567 Escherichia coli UM146 12700649 YP_006111041.1 CDS UM146_10800 NC_017632.1 2255597 2256136 D COG2917 Intracellular septation protein A; intracellular septation protein A 2255597..2256136 Escherichia coli UM146 12700650 YP_006111042.1 CDS UM146_10805 NC_017632.1 2256242 2256640 D COG1607 Acyl-CoA hydrolase; acyl-CoA thioester hydrolase 2256242..2256640 Escherichia coli UM146 12700651 YP_006111043.1 CDS UM146_10810 NC_017632.1 2256680 2257396 R COG0810 Periplasmic protein TonB, links inner and outer membranes; transporter complement(2256680..2257396) Escherichia coli UM146 12700652 YP_006111044.1 CDS UM146_10815 NC_017632.1 2257620 2257916 D COG2350 Uncharacterized protein conserved in bacteria; YciI-like protein 2257620..2257916 Escherichia coli UM146 12700653 YP_006111045.1 CDS UM146_10820 NC_017632.1 2258216 2259469 D COG1226 Kef-type K+ transport systems, predicted NAD-binding component; voltage-gated potassium channel 2258216..2259469 Escherichia coli UM146 12700654 YP_006111046.1 CDS cls NC_017632.1 2259840 2261300 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; cardiolipin synthetase 2259840..2261300 Escherichia coli UM146 12700655 YP_006111047.1 CDS UM146_10830 NC_017632.1 2261335 2261664 D COG3099 Uncharacterized protein conserved in bacteria; dsDNA-mimic protein 2261335..2261664 Escherichia coli UM146 12700656 YP_006111048.1 CDS UM146_10835 NC_017632.1 2261717 2262721 R COG4608 ABC-type oligopeptide transport system, ATPase component; oligopeptide transporter subunit ; ATP-binding component of ABC superfamily protein complement(2261717..2262721) Escherichia coli UM146 12700657 YP_006111049.1 CDS oppD NC_017632.1 2262718 2263731 R COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; oligopeptide ABC transporter ATP-binding protein complement(2262718..2263731) Escherichia coli UM146 12700658 YP_006111050.1 CDS UM146_10845 NC_017632.1 2263743 2264651 R COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide transport system permease OppC complement(2263743..2264651) Escherichia coli UM146 12700659 YP_006111051.1 CDS oppB NC_017632.1 2264666 2265586 R COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide transporter permease complement(2264666..2265586) Escherichia coli UM146 12700660 YP_006111052.1 CDS UM146_10855 NC_017632.1 2265672 2267348 R COG4166 ABC-type oligopeptide transport system, periplasmic component; Periplasmic oligopeptide-binding protein complement(2265672..2267348) Escherichia coli UM146 12700661 YP_006111053.1 CDS UM146_10860 NC_017632.1 2267722 2267883 D hypothetical protein 2267722..2267883 Escherichia coli UM146 12700662 YP_006111054.1 CDS UM146_10865 NC_017632.1 2268041 2268688 R COG2095 Multiple antibiotic transporter; hypothetical protein complement(2268041..2268688) Escherichia coli UM146 12700663 YP_006111055.1 CDS UM146_10870 NC_017632.1 2269165 2271840 D COG1012 NAD-dependent aldehyde dehydrogenases; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2269165..2271840 Escherichia coli UM146 12700664 YP_006111056.1 CDS UM146_10875 NC_017632.1 2271966 2273171 D transposase IS4 2271966..2273171 Escherichia coli UM146 12700665 YP_006111057.1 CDS UM146_10880 NC_017632.1 2273298 2273915 R COG1435 Thymidine kinase; thymidine kinase complement(2273298..2273915) Escherichia coli UM146 12700666 YP_006111058.1 CDS UM146_10885 NC_017632.1 2274519 2274932 D COG2916 DNA-binding protein H-NS; global DNA-binding transcriptional dual regulator H-NS 2274519..2274932 Escherichia coli UM146 12700667 YP_006111059.1 CDS UM146_10890 NC_017632.1 2275076 2275984 R COG1210 UDP-glucose pyrophosphorylase; UTP--glucose-1-phosphate uridylyltransferase subunit GalU complement(2275076..2275984) Escherichia coli UM146 12700668 YP_006111060.1 CDS UM146_10895 NC_017632.1 2276186 2277199 R COG0784 FOG: CheY-like receiver; response regulator of RpoS complement(2276186..2277199) Escherichia coli UM146 12700669 YP_006111061.1 CDS UM146_10900 NC_017632.1 2277291 2278196 R COG1752 Predicted esterase of the alpha-beta hydrolase superfamily; hypothetical protein complement(2277291..2278196) Escherichia coli UM146 12700670 YP_006111062.1 CDS UM146_10905 NC_017632.1 2278408 2278773 D COG3012 Uncharacterized protein conserved in bacteria; hypothetical protein 2278408..2278773 Escherichia coli UM146 12700671 YP_006111063.1 CDS purU NC_017632.1 2278816 2279658 D COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase 2278816..2279658 Escherichia coli UM146 12700672 YP_006111064.1 CDS UM146_10915 NC_017632.1 2280451 2281650 D putative transposase 2280451..2281650 Escherichia coli UM146 12700675 YP_006111065.1 CDS UM146_10920 NC_017632.1 2281703 2282380 R COG2181 Nitrate reductase gamma subunit; Respiratory nitrate reductase subunit gamma complement(2281703..2282380) Escherichia coli UM146 12700676 YP_006111066.1 CDS UM146_10925 NC_017632.1 2282380 2283090 R COG2180 Nitrate reductase delta subunit; Respiratory nitrate reductase 1 delta chain complement(2282380..2283090) Escherichia coli UM146 12700677 YP_006111067.1 CDS UM146_10930 NC_017632.1 2283087 2284625 R COG1140 Nitrate reductase beta subunit; nitrate reductase 1 subunit, beta (Fe-S) complement(2283087..2284625) Escherichia coli UM146 12700678 YP_006111068.1 CDS UM146_10935 NC_017632.1 2284622 2288365 R COG5013 Nitrate reductase alpha subunit; nitrate reductase 1 subunit alpha complement(2284622..2288365) Escherichia coli UM146 12700679 YP_006111069.1 CDS UM146_10940 NC_017632.1 2288758 2290149 R COG2223 Nitrate/nitrite transporter; Nitrite extrusion protein 1 complement(2288758..2290149) Escherichia coli UM146 12700680 YP_006111070.1 CDS UM146_10945 NC_017632.1 2290488 2292284 D COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; nitrate/nitrite sensor protein NarX 2290488..2292284 Escherichia coli UM146 12700681 YP_006111071.1 CDS UM146_10950 NC_017632.1 2292277 2292927 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; nitrate/nitrite sensor protein NarX 2292277..2292927 Escherichia coli UM146 12700682 YP_006111072.1 CDS UM146_10955 NC_017632.1 2292928 2294322 R hypothetical protein complement(2292928..2294322) Escherichia coli UM146 12700683 YP_006111073.1 CDS UM146_10960 NC_017632.1 2294507 2294860 D COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction; hypothetical protein 2294507..2294860 Escherichia coli UM146 12700684 YP_006111074.1 CDS UM146_10965 NC_017632.1 2294904 2295599 R COG3703 Uncharacterized protein involved in cation transport; regulatory protein for cation transport complement(2294904..2295599) Escherichia coli UM146 12700685 YP_006111075.1 CDS chaB NC_017632.1 2295757 2295987 R COG4572 Putative cation transport regulator; cation transport regulator complement(2295757..2295987) Escherichia coli UM146 12700686 YP_006111076.1 CDS UM146_10975 NC_017632.1 2296257 2297357 D COG0387 Ca2+/H+ antiporter; calcium/sodium:proton antiporter 2296257..2297357 Escherichia coli UM146 12700687 YP_006111077.1 CDS UM146_10980 NC_017632.1 2297736 2297870 D hypothetical protein 2297736..2297870 Escherichia coli UM146 12700688 YP_006111078.1 CDS UM146_10985 NC_017632.1 2298018 2298872 R COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2298018..2298872) Escherichia coli UM146 12700689 YP_006111079.1 CDS UM146_10990 NC_017632.1 2298908 2299717 R COG2912 Uncharacterized conserved protein; putative transcriptional regulator complement(2298908..2299717) Escherichia coli UM146 12700690 YP_006111080.1 CDS UM146_10995 NC_017632.1 2299721 2300113 R COG3094 Uncharacterized protein conserved in bacteria; putative transcriptional regulator complement(2299721..2300113) Escherichia coli UM146 12700691 YP_006111081.1 CDS UM146_11000 NC_017632.1 2300110 2300943 R COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(2300110..2300943) Escherichia coli UM146 12700692 YP_006111082.1 CDS prfA NC_017632.1 2300943 2302025 R COG0216 Protein chain release factor A; peptide chain release factor 1 complement(2300943..2302025) Escherichia coli UM146 12700693 YP_006111083.1 CDS hemA NC_017632.1 2302067 2303323 R COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(2302067..2303323) Escherichia coli UM146 12700694 YP_006111084.1 CDS lolB NC_017632.1 2303537 2304160 D COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis; outer membrane lipoprotein LolB 2303537..2304160 Escherichia coli UM146 12700695 YP_006111085.1 CDS ipk NC_017632.1 2304160 2305011 D COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2304160..2305011 Escherichia coli UM146 12700696 YP_006111086.1 CDS UM146_11025 NC_017632.1 2305096 2306109 D COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase 2305096..2306109 Escherichia coli UM146 12700697 YP_006111087.1 CDS UM146_11030 NC_017632.1 2306234 2307913 D COG0659 Sulfate permease and related transporters (MFS superfamily); putative sulfate transporter YchM 2306234..2307913 Escherichia coli UM146 12700698 YP_006111088.1 CDS UM146_11035 NC_017632.1 2307968 2308246 R hypothetical protein complement(2307968..2308246) Escherichia coli UM146 12700699 YP_006111089.1 CDS UM146_11040 NC_017632.1 2308524 2309108 D COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 2308524..2309108 Escherichia coli UM146 12700700 YP_006111090.1 CDS UM146_11045 NC_017632.1 2309225 2310316 D COG0012 Predicted GTPase, probable translation factor; GTP-dependent nucleic acid-binding protein EngD 2309225..2310316 Escherichia coli UM146 12700701 YP_006111091.1 CDS UM146_11050 NC_017632.1 2310452 2310682 D hypothetical protein 2310452..2310682 Escherichia coli UM146 12700702 YP_006111092.1 CDS UM146_11055 NC_017632.1 2310720 2312639 R COG3284 Transcriptional activator of acetoin/glycerol metabolism; DNA-binding transcriptional regulator DhaR complement(2310720..2312639) Escherichia coli UM146 12700703 YP_006111093.1 CDS UM146_11060 NC_017632.1 2312867 2313937 D COG2376 Dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2312867..2313937 Escherichia coli UM146 12700704 YP_006111094.1 CDS UM146_11065 NC_017632.1 2313948 2314580 D COG2376 Dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaL 2313948..2314580 Escherichia coli UM146 12700705 YP_006111095.1 CDS UM146_11070 NC_017632.1 2314591 2316009 D COG3412 Uncharacterized protein conserved in bacteria; dihydroxyacetone kinase subunit DhaM 2314591..2316009 Escherichia coli UM146 12700706 YP_006111096.1 CDS treA NC_017632.1 2316328 2318025 D COG1626 Neutral trehalase; trehalase 2316328..2318025 Escherichia coli UM146 12700707 YP_006111097.1 CDS UM146_11080 NC_017632.1 2318362 2319384 D COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; putative ABC transporter periplasmic binding protein 2318362..2319384 Escherichia coli UM146 12700708 YP_006111098.1 CDS UM146_11085 NC_017632.1 2319384 2320364 D COG0609 ABC-type Fe3+-siderophore transport system, permease component; ABC transporter permease 2319384..2320364 Escherichia coli UM146 12700709 YP_006111099.1 CDS UM146_11090 NC_017632.1 2320361 2321119 D COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; putative iron compound ABC transporter ATP-binding protein 2320361..2321119 Escherichia coli UM146 12700710 YP_006111100.1 CDS UM146_11095 NC_017632.1 2321129 2321941 D COG0500 SAM-dependent methyltransferases; hypothetical protein 2321129..2321941 Escherichia coli UM146 12700711 YP_006111101.1 CDS UM146_11100 NC_017632.1 2321938 2322792 D COG0157 Nicotinate-nucleotide pyrophosphorylase; molybdenum transport protein ModD 2321938..2322792 Escherichia coli UM146 12700712 YP_006111102.1 CDS UM146_11105 NC_017632.1 2322818 2324788 D COG1629 Outer membrane receptor proteins, mostly Fe transport; putative outer membrane receptor, probably tonB dependent 2322818..2324788 Escherichia coli UM146 12700713 YP_006111103.1 CDS UM146_11110 NC_017632.1 2324838 2325092 R COG2261 Predicted membrane protein; hypothetical protein complement(2324838..2325092) Escherichia coli UM146 12700714 YP_006111104.1 CDS UM146_11115 NC_017632.1 2325293 2326027 D COG5581 Predicted glycosyltransferase; protein involved in flagellar function 2325293..2326027 Escherichia coli UM146 12700715 YP_006111105.1 CDS UM146_11120 NC_017632.1 2326029 2326640 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); membrane-bound lytic murein transglycosylase E complement(2326029..2326640) Escherichia coli UM146 12700716 YP_006111106.1 CDS ldcA NC_017632.1 2326740 2327654 D COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF; L,D-carboxypeptidase A 2326740..2327654 Escherichia coli UM146 12700717 YP_006111107.1 CDS UM146_11130 NC_017632.1 2327749 2329485 D COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain; potassium/proton antiporter 2327749..2329485 Escherichia coli UM146 12700718 YP_006111108.1 CDS dadX NC_017632.1 2329542 2330612 R COG0787 Alanine racemase; alanine racemase complement(2329542..2330612) Escherichia coli UM146 12700719 YP_006111109.1 CDS UM146_11140 NC_017632.1 2330622 2331920 R COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase small subunit complement(2330622..2331920) Escherichia coli UM146 12700720 YP_006111110.1 CDS UM146_11145 NC_017632.1 2332250 2333782 D COG2719 Uncharacterized conserved protein; SpoVR family protein 2332250..2333782 Escherichia coli UM146 12700721 YP_006111111.1 CDS UM146_11150 NC_017632.1 2333945 2334664 R COG2186 Transcriptional regulators; fatty acid metabolism regulator complement(2333945..2334664) Escherichia coli UM146 12700722 YP_006111112.1 CDS nhaB NC_017632.1 2334886 2336427 D COG3067 Na+/H+ antiporter; sodium/proton antiporter 2334886..2336427 Escherichia coli UM146 12700723 YP_006111113.1 CDS UM146_11160 NC_017632.1 2336573 2337103 D COG1495 Disulfide bond formation protein DsbB; disulfide bond formation protein B 2336573..2337103 Escherichia coli UM146 12700724 YP_006111114.1 CDS umuC NC_017632.1 2337148 2338416 R COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA polymerase V subunit UmuC complement(2337148..2338416) Escherichia coli UM146 12700725 YP_006111115.1 CDS UM146_11170 NC_017632.1 2338416 2338835 R COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); DNA polymerase V subunit UmuD complement(2338416..2338835) Escherichia coli UM146 12700726 YP_006111116.1 CDS UM146_11175 NC_017632.1 2339140 2339358 D hemolysin E 2339140..2339358 Escherichia coli UM146 12700727 YP_006111117.1 CDS UM146_11180 NC_017632.1 2339629 2340090 R COG2983 Uncharacterized conserved protein; hypothetical protein complement(2339629..2340090) Escherichia coli UM146 12700728 YP_006111118.1 CDS UM146_11185 NC_017632.1 2340167 2340826 R COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); hypothetical protein complement(2340167..2340826) Escherichia coli UM146 12700729 YP_006111119.1 CDS UM146_11190 NC_017632.1 2340898 2341191 R COG3100 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2340898..2341191) Escherichia coli UM146 12700730 YP_006111120.1 CDS UM146_11195 NC_017632.1 2341433 2341834 D hypothetical protein 2341433..2341834 Escherichia coli UM146 12700731 YP_006111121.1 CDS UM146_11200 NC_017632.1 2341954 2342322 R hypothetical protein complement(2341954..2342322) Escherichia coli UM146 12700732 YP_006111122.1 CDS minC NC_017632.1 2342842 2343537 D COG0850 Septum formation inhibitor; septum formation inhibitor 2342842..2343537 Escherichia coli UM146 12700733 YP_006111123.1 CDS UM146_11210 NC_017632.1 2343561 2344373 D COG2894 Septum formation inhibitor-activating ATPase; cell division inhibitor MinD 2343561..2344373 Escherichia coli UM146 12700734 YP_006111124.1 CDS minE NC_017632.1 2344377 2344643 D COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE 2344377..2344643 Escherichia coli UM146 12700735 YP_006111125.1 CDS UM146_11220 NC_017632.1 2345015 2345341 R adhesin-like autotransporter complement(2345015..2345341) Escherichia coli UM146 12700736 YP_006111126.1 CDS UM146_11225 NC_017632.1 2345992 2346276 D hypothetical protein 2345992..2346276 Escherichia coli UM146 12700737 YP_006111127.1 CDS UM146_11230 NC_017632.1 2346286 2346615 D hypothetical protein 2346286..2346615 Escherichia coli UM146 12700738 YP_006111128.1 CDS UM146_11235 NC_017632.1 2346673 2347200 R COG3468 Type V secretory pathway, adhesin AidA; hypothetical protein complement(2346673..2347200) Escherichia coli UM146 12700739 YP_006111129.1 CDS UM146_11240 NC_017632.1 2347346 2347528 R hypothetical protein complement(2347346..2347528) Escherichia coli UM146 12700740 YP_006111130.1 CDS UM146_11245 NC_017632.1 2348013 2348192 R hypothetical protein complement(2348013..2348192) Escherichia coli UM146 12700741 YP_006111131.1 CDS UM146_11250 NC_017632.1 2348590 2348808 R hypothetical protein complement(2348590..2348808) Escherichia coli UM146 12700742 YP_006111132.1 CDS UM146_11255 NC_017632.1 2348939 2349214 D COG3677 Transposase and inactivated derivatives; transposase 2348939..2349214 Escherichia coli UM146 12700743 YP_006111133.1 CDS UM146_11260 NC_017632.1 2349133 2349636 D COG1662 Transposase and inactivated derivatives, IS1 family; InsBcp5 protein 2349133..2349636 Escherichia coli UM146 12700744 YP_006111134.1 CDS UM146_11265 NC_017632.1 2349674 2349946 R hypothetical protein complement(2349674..2349946) Escherichia coli UM146 12700745 YP_006111135.1 CDS UM146_11270 NC_017632.1 2349989 2350225 R hypothetical protein complement(2349989..2350225) Escherichia coli UM146 12700746 YP_006111136.1 CDS UM146_11275 NC_017632.1 2350539 2351750 D COG2200 FOG: EAL domain; putative cyclic-di-GMP phosphodiesterase; blue-light sensing protein using FAD (BLUF) 2350539..2351750 Escherichia coli UM146 12700747 YP_006111137.1 CDS UM146_11280 NC_017632.1 2351955 2352686 D COG0789 Predicted transcriptional regulators; putative DNA-binding transcriptional regulator 2351955..2352686 Escherichia coli UM146 12700748 YP_006111138.1 CDS UM146_11285 NC_017632.1 2352907 2353311 D COG5562 Phage envelope protein; hypothetical protein 2352907..2353311 Escherichia coli UM146 12700749 YP_006111139.1 CDS UM146_11290 NC_017632.1 2353573 2353725 R COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase complement(2353573..2353725) Escherichia coli UM146 12700750 YP_006111140.1 CDS UM146_11295 NC_017632.1 2353919 2354074 R hypothetical protein complement(2353919..2354074) Escherichia coli UM146 12700751 YP_006111141.1 CDS UM146_11300 NC_017632.1 2354197 2354967 R hypothetical protein complement(2354197..2354967) Escherichia coli UM146 12700752 YP_006111142.1 CDS UM146_11305 NC_017632.1 2355654 2356568 D COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; iron transport protein, periplasmic-binding protein 2355654..2356568 Escherichia coli UM146 12700753 YP_006111143.1 CDS UM146_11310 NC_017632.1 2356568 2357395 D COG1121 ABC-type Mn/Zn transport systems, ATPase component; iron transport protein, ATP-binding component 2356568..2357395 Escherichia coli UM146 12700754 YP_006111144.1 CDS UM146_11315 NC_017632.1 2357392 2358249 D COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; iron transport protein, inner membrane component 2357392..2358249 Escherichia coli UM146 12700755 YP_006111145.1 CDS UM146_11320 NC_017632.1 2358246 2359103 D COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; iron transport protein, inner membrane component 2358246..2359103 Escherichia coli UM146 12700756 YP_006111146.1 CDS UM146_11325 NC_017632.1 2359195 2359488 R hypothetical protein complement(2359195..2359488) Escherichia coli UM146 12700757 YP_006111147.1 CDS UM146_11330 NC_017632.1 2359501 2359779 R hypothetical protein complement(2359501..2359779) Escherichia coli UM146 12700758 YP_006111148.1 CDS UM146_11335 NC_017632.1 2359776 2361836 R hypothetical protein complement(2359776..2361836) Escherichia coli UM146 12700759 YP_006111149.1 CDS UM146_11340 NC_017632.1 2361895 2365377 R COG4733 Phage-related protein, tail component; putative tail component of prophage complement(2361895..2365377) Escherichia coli UM146 12700760 YP_006111150.1 CDS UM146_11345 NC_017632.1 2365438 2366010 R COG4723 Phage-related protein, tail component; Tail assembly protein I complement(2365438..2366010) Escherichia coli UM146 12700761 YP_006111151.1 CDS UM146_11350 NC_017632.1 2366007 2366606 R COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily; tail assembly protein complement(2366007..2366606) Escherichia coli UM146 12700762 YP_006111152.1 CDS UM146_11355 NC_017632.1 2366756 2367454 R COG4672 Phage-related protein; Minor tail protein L complement(2366756..2367454) Escherichia coli UM146 12700763 YP_006111153.1 CDS UM146_11360 NC_017632.1 2367454 2367783 R COG4718 Phage-related protein; Minor tail protein M complement(2367454..2367783) Escherichia coli UM146 12700764 YP_006111154.1 CDS UM146_11365 NC_017632.1 2367780 2370341 R COG5281 Phage-related minor tail protein; putative tail component of prophage complement(2367780..2370341) Escherichia coli UM146 12700765 YP_006111155.1 CDS UM146_11370 NC_017632.1 2370334 2370699 R putative minor tail protein complement(2370334..2370699) Escherichia coli UM146 12700766 YP_006111156.1 CDS UM146_11375 NC_017632.1 2370750 2371172 R putative tail component of prophage complement(2370750..2371172) Escherichia coli UM146 12700767 YP_006111157.1 CDS UM146_11380 NC_017632.1 2371188 2371928 R COG5492 Bacterial surface proteins containing Ig-like domains; putative tail component complement(2371188..2371928) Escherichia coli UM146 12700768 YP_006111158.1 CDS UM146_11385 NC_017632.1 2371936 2372331 R COG0477 Permeases of the major facilitator superfamily; putative tail component of prophage complement(2371936..2372331) Escherichia coli UM146 12700769 YP_006111159.1 CDS UM146_11390 NC_017632.1 2372328 2372906 R putative minor tail protein complement(2372328..2372906) Escherichia coli UM146 12700770 YP_006111160.1 CDS UM146_11395 NC_017632.1 2372918 2373271 R putative head-tail joining protein of prophage complement(2372918..2373271) Escherichia coli UM146 12700771 YP_006111161.1 CDS UM146_11400 NC_017632.1 2373264 2373638 R hypothetical protein complement(2373264..2373638) Escherichia coli UM146 12700772 YP_006111162.1 CDS UM146_11405 NC_017632.1 2373690 2374718 R Major head protein (Head protein GP7) complement(2373690..2374718) Escherichia coli UM146 12700773 YP_006111163.1 CDS UM146_11410 NC_017632.1 2374776 2375123 R Head decoration protein complement(2374776..2375123) Escherichia coli UM146 12700774 YP_006111164.1 CDS UM146_11415 NC_017632.1 2375160 2376665 R COG0616 Periplasmic serine proteases (ClpP class); Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) complement(2375160..2376665) Escherichia coli UM146 12700775 YP_006111165.1 CDS UM146_11420 NC_017632.1 2376655 2378247 R COG5511 Bacteriophage capsid protein; Portal protein (Head protein Gp4) complement(2376655..2378247) Escherichia coli UM146 12700776 YP_006111166.1 CDS UM146_11425 NC_017632.1 2378244 2378450 R Head-stabilizing protein complement(2378244..2378450) Escherichia coli UM146 12700777 YP_006111167.1 CDS UM146_11430 NC_017632.1 2378434 2380362 R COG5525 Bacteriophage tail assembly protein; putative DNA packaging protein of prophage complement(2378434..2380362) Escherichia coli UM146 12700778 YP_006111168.1 CDS UM146_11435 NC_017632.1 2380334 2380882 R COG4220 Phage DNA packaging protein, Nu1 subunit of terminase; Prophage Qin DNA packaging protein NU1-like protein complement(2380334..2380882) Escherichia coli UM146 12700779 YP_006111169.1 CDS UM146_11440 NC_017632.1 2381445 2381627 R hypothetical protein complement(2381445..2381627) Escherichia coli UM146 12700780 YP_006111170.1 CDS UM146_11445 NC_017632.1 2381834 2382214 R COG0810 Periplasmic protein TonB, links inner and outer membranes; putative tonB-like membrane protein encoded within prophage complement(2381834..2382214) Escherichia coli UM146 12700781 YP_006111171.1 CDS UM146_11450 NC_017632.1 2382641 2382934 D lambda prophage Bor protein 2382641..2382934 Escherichia coli UM146 12700782 YP_006111172.1 CDS UM146_11455 NC_017632.1 2382966 2383427 R putative Rz endopeptidase from lambdoid prophage complement(2382966..2383427) Escherichia coli UM146 12700783 YP_006111173.1 CDS UM146_11460 NC_017632.1 2383424 2383921 R COG3772 Phage-related lysozyme (muraminidase); lysozyme complement(2383424..2383921) Escherichia coli UM146 12700784 YP_006111174.1 CDS UM146_11465 NC_017632.1 2383921 2384136 R phage lysis protein complement(2383921..2384136) Escherichia coli UM146 12700785 YP_006111175.1 CDS UM146_11470 NC_017632.1 2384665 2385807 D COG3203 Outer membrane protein (porin); putative outer membrane porin 2384665..2385807 Escherichia coli UM146 12700786 YP_006111176.1 CDS UM146_11475 NC_017632.1 2385996 2386379 R hypothetical protein complement(2385996..2386379) Escherichia coli UM146 12700787 YP_006111177.1 CDS UM146_11480 NC_017632.1 2386465 2386602 R hypothetical protein complement(2386465..2386602) Escherichia coli UM146 12700788 YP_006111178.1 CDS UM146_11485 NC_017632.1 2386602 2386964 R COG4570 Holliday junction resolvase; endodeoxyribonuclease RUS complement(2386602..2386964) Escherichia coli UM146 12700789 YP_006111179.1 CDS UM146_11490 NC_017632.1 2386984 2387178 R hypothetical protein complement(2386984..2387178) Escherichia coli UM146 12700790 YP_006111180.1 CDS UM146_11495 NC_017632.1 2387171 2387512 R hypothetical protein complement(2387171..2387512) Escherichia coli UM146 12700791 YP_006111181.1 CDS UM146_11500 NC_017632.1 2387515 2387691 R protein NinE complement(2387515..2387691) Escherichia coli UM146 12700792 YP_006111182.1 CDS UM146_11505 NC_017632.1 2387688 2388215 R putative DNA N-6-adenine-methyltransferase from phage origin complement(2387688..2388215) Escherichia coli UM146 12700793 YP_006111183.1 CDS UM146_11510 NC_017632.1 2388212 2388652 R recombination protein ninB from phage origin complement(2388212..2388652) Escherichia coli UM146 12700794 YP_006111184.1 CDS UM146_11515 NC_017632.1 2388726 2389016 R COG0640 Predicted transcriptional regulators; Ren protein from phage origin complement(2388726..2389016) Escherichia coli UM146 12700795 YP_006111185.1 CDS UM146_11520 NC_017632.1 2389013 2389714 R putative replication protein P of bacteriophage complement(2389013..2389714) Escherichia coli UM146 12700796 YP_006111186.1 CDS UM146_11525 NC_017632.1 2389711 2390085 R putative replication protein O of bacteriophage complement(2389711..2390085) Escherichia coli UM146 12700797 YP_006111187.1 CDS UM146_11530 NC_017632.1 2390079 2390609 R putative replication protein O of bacteriophage complement(2390079..2390609) Escherichia coli UM146 12700798 YP_006111188.1 CDS UM146_11535 NC_017632.1 2390642 2390938 R Regulatory protein CII from phage origin complement(2390642..2390938) Escherichia coli UM146 12700799 YP_006111189.1 CDS UM146_11540 NC_017632.1 2391080 2391466 R COG1396 Predicted transcriptional regulators; putative repressor protein complement(2391080..2391466) Escherichia coli UM146 12700800 YP_006111190.1 CDS UM146_11545 NC_017632.1 2391413 2392066 D COG1396 Predicted transcriptional regulators; repressor protein CI 2391413..2392066 Escherichia coli UM146 12700801 YP_006111191.1 CDS UM146_11550 NC_017632.1 2392106 2392663 D hypothetical protein 2392106..2392663 Escherichia coli UM146 12700802 YP_006111192.1 CDS UM146_11555 NC_017632.1 2392660 2393412 D hypothetical protein 2392660..2393412 Escherichia coli UM146 12700803 YP_006111193.1 CDS UM146_11560 NC_017632.1 2393689 2393871 D hypothetical protein 2393689..2393871 Escherichia coli UM146 12700804 YP_006111194.1 CDS UM146_11565 NC_017632.1 2394138 2394719 R Superinfection exclusion protein B complement(2394138..2394719) Escherichia coli UM146 12700805 YP_006111195.1 CDS UM146_11570 NC_017632.1 2394933 2395133 D Restriction inhibitor protein ral (Antirestriction protein) 2394933..2395133 Escherichia coli UM146 12700806 YP_006111196.1 CDS UM146_11575 NC_017632.1 2395316 2395684 D hypothetical protein 2395316..2395684 Escherichia coli UM146 12700807 YP_006111197.1 CDS UM146_11580 NC_017632.1 2395757 2395921 D antitermination protein 2395757..2395921 Escherichia coli UM146 12700808 YP_006111198.1 CDS UM146_11585 NC_017632.1 2395764 2396033 D Kil protein 2395764..2396033 Escherichia coli UM146 12700809 YP_006111199.1 CDS UM146_11590 NC_017632.1 2396109 2396405 D Host-nuclease inhibitor protein gam from bacteriophage origin 2396109..2396405 Escherichia coli UM146 12700810 YP_006111200.1 CDS UM146_11595 NC_017632.1 2396411 2397196 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; Bet protein 2396411..2397196 Escherichia coli UM146 12700811 YP_006111201.1 CDS UM146_11600 NC_017632.1 2397193 2397873 D putative exonuclease 2397193..2397873 Escherichia coli UM146 12700812 YP_006111202.1 CDS UM146_11605 NC_017632.1 2397864 2398052 D hypothetical protein 2397864..2398052 Escherichia coli UM146 12700813 YP_006111203.1 CDS UM146_11610 NC_017632.1 2398025 2398216 D hypothetical protein 2398025..2398216 Escherichia coli UM146 12700814 YP_006111204.1 CDS UM146_11615 NC_017632.1 2398603 2398824 D COG1734 DnaK suppressor protein; hypothetical protein 2398603..2398824 Escherichia coli UM146 12700815 YP_006111205.1 CDS UM146_11620 NC_017632.1 2398824 2399150 D hypothetical protein 2398824..2399150 Escherichia coli UM146 12700816 YP_006111206.1 CDS UM146_11625 NC_017632.1 2399134 2399502 D hypothetical protein 2399134..2399502 Escherichia coli UM146 12700817 YP_006111207.1 CDS UM146_11630 NC_017632.1 2399740 2400882 D COG0582 Integrase; phage integrase 2399740..2400882 Escherichia coli UM146 12700818 YP_006111208.1 CDS UM146_11635 NC_017632.1 2400995 2402245 R COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase complement(2400995..2402245) Escherichia coli UM146 12700819 YP_006111209.1 CDS UM146_11640 NC_017632.1 2402417 2403070 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 23S rRNA pseudouridine synthase E 2402417..2403070 Escherichia coli UM146 12700820 YP_006111210.1 CDS UM146_11645 NC_017632.1 2403080 2403541 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Phosphatase nudJ 2403080..2403541 Escherichia coli UM146 12700821 YP_006111211.1 CDS mnmA NC_017632.1 2403595 2404701 D COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA 2403595..2404701 Escherichia coli UM146 12700822 YP_006111212.1 CDS UM146_11655 NC_017632.1 2404731 2405378 D COG2915 Uncharacterized protein involved in purine metabolism; hypothetical protein 2404731..2405378 Escherichia coli UM146 12700823 YP_006111213.1 CDS UM146_11660 NC_017632.1 2405382 2406752 D COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 2405382..2406752 Escherichia coli UM146 12700824 YP_006111214.1 CDS UM146_11665 NC_017632.1 2406921 2407592 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator PhoP 2406921..2407592 Escherichia coli UM146 12700825 YP_006111215.1 CDS UM146_11670 NC_017632.1 2407592 2409052 D COG0642 Signal transduction histidine kinase; sensor protein PhoQ 2407592..2409052 Escherichia coli UM146 12700826 YP_006111216.1 CDS UM146_11675 NC_017632.1 2409128 2410249 D COG2850 Uncharacterized conserved protein; putative cytoplasmic protein 2409128..2410249 Escherichia coli UM146 12700827 YP_006111217.1 CDS UM146_11680 NC_017632.1 2410298 2410834 R COG2195 Di- and tripeptidases; peptidase T complement(2410298..2410834) Escherichia coli UM146 12700828 YP_006111218.1 CDS UM146_11685 NC_017632.1 2410834 2411523 R COG2195 Di- and tripeptidases; peptidase T complement(2410834..2411523) Escherichia coli UM146 12700829 YP_006111219.1 CDS potA NC_017632.1 2411773 2412909 D COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; putrescine/spermidine ABC transporter ATPase 2411773..2412909 Escherichia coli UM146 12700830 YP_006111220.1 CDS potB NC_017632.1 2412893 2413750 D COG1176 ABC-type spermidine/putrescine transport system, permease component I; spermidine/putrescine ABC transporter membrane protein 2412893..2413750 Escherichia coli UM146 12700831 YP_006111221.1 CDS potC NC_017632.1 2413747 2414541 D COG1177 ABC-type spermidine/putrescine transport system, permease component II; spermidine/putrescine ABC transporter membrane protein 2413747..2414541 Escherichia coli UM146 12700832 YP_006111222.1 CDS potD NC_017632.1 2414538 2415584 D COG0687 Spermidine/putrescine-binding periplasmic protein; spermidine/putrescine ABC transporter substrate-binding protein 2414538..2415584 Escherichia coli UM146 12700833 YP_006111223.1 CDS UM146_11710 NC_017632.1 2415642 2416049 D inner membrane protein 2415642..2416049 Escherichia coli UM146 12700834 YP_006111224.1 CDS UM146_11715 NC_017632.1 2416099 2416887 D inner membrane protein ycfZ 2416099..2416887 Escherichia coli UM146 12700835 YP_006111225.1 CDS UM146_11720 NC_017632.1 2417025 2417846 R COG0846 NAD-dependent protein deacetylases, SIR2 family; NAD-dependent deacetylase complement(2417025..2417846) Escherichia coli UM146 12700836 YP_006111226.1 CDS UM146_11725 NC_017632.1 2417862 2418773 R COG1940 Transcriptional regulator/sugar kinase; N-acetyl-D-glucosamine kinase complement(2417862..2418773) Escherichia coli UM146 12700837 YP_006111227.1 CDS UM146_11730 NC_017632.1 2418802 2420046 R COG4591 ABC-type transport system, involved in lipoprotein release, permease component; outer membrane-specific lipoprotein transporter subunit LolE complement(2418802..2420046) Escherichia coli UM146 12700838 YP_006111228.1 CDS lolD NC_017632.1 2420046 2420747 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; lipoprotein transporter ATP-binding subunit complement(2420046..2420747) Escherichia coli UM146 12700839 YP_006111229.1 CDS UM146_11740 NC_017632.1 2420740 2421939 R COG4591 ABC-type transport system, involved in lipoprotein release, permease component; outer membrane-specific lipoprotein transporter subunit LolC complement(2420740..2421939) Escherichia coli UM146 12700840 YP_006111230.1 CDS UM146_11745 NC_017632.1 2422338 2423276 D COG4763 Predicted membrane protein; hypothetical protein 2422338..2423276 Escherichia coli UM146 12700841 YP_006111231.1 CDS UM146_11750 NC_017632.1 2423404 2426850 D COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor 2423404..2426850 Escherichia coli UM146 12700842 YP_006111232.1 CDS UM146_11755 NC_017632.1 2426998 2427957 D COG1376 Uncharacterized protein conserved in bacteria; hypothetical protein 2426998..2427957 Escherichia coli UM146 12700843 YP_006111233.1 CDS UM146_11760 NC_017632.1 2428038 2428295 R hypothetical protein complement(2428038..2428295) Escherichia coli UM146 12700844 YP_006111234.1 CDS UM146_11765 NC_017632.1 2428458 2429168 D COG1309 Transcriptional regulator; putative DNA-binding transcriptional regulator 2428458..2429168 Escherichia coli UM146 12700845 YP_006111235.1 CDS UM146_11770 NC_017632.1 2429230 2429757 R COG3134 Predicted outer membrane lipoprotein; hypothetical protein complement(2429230..2429757) Escherichia coli UM146 12700846 YP_006111236.1 CDS UM146_11775 NC_017632.1 2429895 2429999 D hypothetical protein 2429895..2429999 Escherichia coli UM146 12700847 YP_006111237.1 CDS UM146_11780 NC_017632.1 2429996 2431300 R COG1252 NADH dehydrogenase, FAD-containing subunit; respiratory NADH dehydrogenase 2/cupric reductase complement(2429996..2431300) Escherichia coli UM146 12700848 YP_006111238.1 CDS UM146_11785 NC_017632.1 2431699 2432241 R COG3150 Predicted esterase; hypothetical protein complement(2431699..2432241) Escherichia coli UM146 12700849 YP_006111239.1 CDS UM146_11790 NC_017632.1 2432264 2433277 R COG1472 Beta-glucosidase-related glycosidases; beta-hexosaminidase complement(2432264..2433277) Escherichia coli UM146 12700850 YP_006111240.1 CDS thiK NC_017632.1 2433300 2434124 R COG0510 Predicted choline kinase involved in LPS biosynthesis; thiamine kinase complement(2433300..2434124) Escherichia coli UM146 12700851 YP_006111241.1 CDS UM146_11800 NC_017632.1 2434105 2434746 R COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family); hypothetical protein complement(2434105..2434746) Escherichia coli UM146 12700852 YP_006111242.1 CDS UM146_11805 NC_017632.1 2434760 2435137 R COG5633 Predicted periplasmic lipoprotein; hypothetical protein complement(2434760..2435137) Escherichia coli UM146 12700853 YP_006111243.1 CDS UM146_11810 NC_017632.1 2435140 2435499 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; purine nucleoside phosphoramidase complement(2435140..2435499) Escherichia coli UM146 12700854 YP_006111244.1 CDS UM146_11815 NC_017632.1 2435833 2438022 D COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; ferric-rhodotorulic acid outer membrane transporter 2435833..2438022 Escherichia coli UM146 12700855 YP_006111245.1 CDS UM146_11820 NC_017632.1 2438082 2439515 R COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; glucose-specific PTS system IIBC components complement(2438082..2439515) Escherichia coli UM146 12700856 YP_006111246.1 CDS UM146_11825 NC_017632.1 2439810 2440607 R COG0084 Mg-dependent DNase; putative metallodependent hydrolase complement(2439810..2440607) Escherichia coli UM146 12700857 YP_006111247.1 CDS UM146_11830 NC_017632.1 2440618 2441622 R COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' complement(2440618..2441622) Escherichia coli UM146 12700858 YP_006111248.1 CDS tmk NC_017632.1 2441619 2442260 R COG0125 Thymidylate kinase; thymidylate kinase complement(2441619..2442260) Escherichia coli UM146 12700859 YP_006111249.1 CDS UM146_11840 NC_017632.1 2442250 2443272 R COG1559 Predicted periplasmic solute-binding protein; hypothetical protein complement(2442250..2443272) Escherichia coli UM146 12700860 YP_006111250.1 CDS UM146_11845 NC_017632.1 2443275 2444084 R COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; 4-amino-4-deoxychorismate lyase complement(2443275..2444084) Escherichia coli UM146 12700861 YP_006111251.1 CDS UM146_11850 NC_017632.1 2444204 2445445 R COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II complement(2444204..2445445) Escherichia coli UM146 12700862 YP_006111252.1 CDS UM146_11855 NC_017632.1 2445532 2445768 R COG0236 Acyl carrier protein; hypothetical protein complement(2445532..2445768) Escherichia coli UM146 12700863 YP_006111253.1 CDS fabG NC_017632.1 2445979 2446713 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase complement(2445979..2446713) Escherichia coli UM146 12700864 YP_006111254.1 CDS UM146_11865 NC_017632.1 2446726 2447655 R COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl-CoA-[acyl-carrier-protein] transacylase complement(2446726..2447655) Escherichia coli UM146 12700865 YP_006111255.1 CDS UM146_11870 NC_017632.1 2447671 2448624 R COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase complement(2447671..2448624) Escherichia coli UM146 12700866 YP_006111256.1 CDS UM146_11875 NC_017632.1 2448692 2449732 R COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative glycerol-3-phosphate acyltransferase PlsX complement(2448692..2449732) Escherichia coli UM146 12700867 YP_006111257.1 CDS rpmF NC_017632.1 2449843 2450016 R COG0333 Ribosomal protein L32; 50S ribosomal protein L32 complement(2449843..2450016) Escherichia coli UM146 12700868 YP_006111258.1 CDS UM146_11885 NC_017632.1 2450068 2450589 R COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; hypothetical protein complement(2450068..2450589) Escherichia coli UM146 12700869 YP_006111259.1 CDS UM146_11890 NC_017632.1 2450749 2451372 D COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 2450749..2451372 Escherichia coli UM146 12700870 YP_006111260.1 CDS UM146_11895 NC_017632.1 2451484 2452443 R COG0564 Pseudouridylate synthases, 23S RNA-specific; 23S rRNA pseudouridylate synthase C complement(2451484..2452443) Escherichia coli UM146 12700871 YP_006111261.1 CDS UM146_11900 NC_017632.1 2452561 2452935 R hypothetical protein complement(2452561..2452935) Escherichia coli UM146 12700872 YP_006111262.1 CDS rne NC_017632.1 2453025 2456201 D COG1530 Ribonucleases G and E; ribonuclease E 2453025..2456201 Escherichia coli UM146 12700873 YP_006111263.1 CDS flgL NC_017632.1 2456396 2457349 R COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL complement(2456396..2457349) Escherichia coli UM146 12700874 YP_006111264.1 CDS flgK NC_017632.1 2457361 2459004 R COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK complement(2457361..2459004) Escherichia coli UM146 12700875 YP_006111265.1 CDS flgJ NC_017632.1 2459070 2460011 R COG3951 Rod binding protein; flagellar rod assembly protein/muramidase FlgJ complement(2459070..2460011) Escherichia coli UM146 12700876 YP_006111266.1 CDS flgI NC_017632.1 2460011 2461111 R COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein complement(2460011..2461111) Escherichia coli UM146 12700877 YP_006111267.1 CDS flgH NC_017632.1 2461120 2461818 R COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein complement(2461120..2461818) Escherichia coli UM146 12700878 YP_006111268.1 CDS flgG NC_017632.1 2461871 2462653 R COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG complement(2461871..2462653) Escherichia coli UM146 12700879 YP_006111269.1 CDS flgF NC_017632.1 2462825 2463580 R COG4787 Flagellar basal body rod protein; flagellar basal body rod protein FlgF complement(2462825..2463580) Escherichia coli UM146 12700880 YP_006111270.1 CDS flgE NC_017632.1 2463600 2464805 R COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE complement(2463600..2464805) Escherichia coli UM146 12700881 YP_006111271.1 CDS flgD NC_017632.1 2464830 2465525 R COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein complement(2464830..2465525) Escherichia coli UM146 12700882 YP_006111272.1 CDS flgC NC_017632.1 2465537 2465941 R COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC complement(2465537..2465941) Escherichia coli UM146 12700883 YP_006111273.1 CDS flgB NC_017632.1 2465945 2466361 R COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB complement(2465945..2466361) Escherichia coli UM146 12700884 YP_006111274.1 CDS flgA NC_017632.1 2466516 2467175 D COG1261 Flagellar basal body P-ring biosynthesis protein; flagellar basal body P-ring biosynthesis protein FlgA 2466516..2467175 Escherichia coli UM146 12700885 YP_006111275.1 CDS UM146_11970 NC_017632.1 2467251 2467544 D COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor); anti-sigma-28 factor FlgM 2467251..2467544 Escherichia coli UM146 12700886 YP_006111276.1 CDS UM146_11975 NC_017632.1 2467549 2467965 D COG3418 Flagellar biosynthesis/type III secretory pathway chaperone; export chaperone for FlgK and FlgL 2467549..2467965 Escherichia coli UM146 12700887 YP_006111277.1 CDS UM146_11980 NC_017632.1 2468005 2469540 R COG0728 Uncharacterized membrane protein, putative virulence factor; Virulence factor mviN-like protein complement(2468005..2469540) Escherichia coli UM146 12700888 YP_006111278.1 CDS UM146_11985 NC_017632.1 2469497 2469604 D hypothetical protein 2469497..2469604 Escherichia coli UM146 12700889 YP_006111279.1 CDS UM146_11990 NC_017632.1 2469650 2470573 R COG0673 Predicted dehydrogenases and related proteins; putative oxidoreductase with NAD(P)-binding Rossmann-fold domain complement(2469650..2470573) Escherichia coli UM146 12700890 YP_006111280.1 CDS UM146_11995 NC_017632.1 2470575 2471222 R COG3132 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2470575..2471222) Escherichia coli UM146 12700891 YP_006111281.1 CDS UM146_12000 NC_017632.1 2471233 2471817 R COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; ribosomal-protein-S5-alanine N-acetyltransferase complement(2471233..2471817) Escherichia coli UM146 12700892 YP_006111282.1 CDS UM146_12005 NC_017632.1 2472053 2473261 D COG0477 Permeases of the major facilitator superfamily; multidrug resistance protein MdtH 2472053..2473261 Escherichia coli UM146 12700893 YP_006111283.1 CDS UM146_12010 NC_017632.1 2473325 2473972 D COG2999 Glutaredoxin 2; glutaredoxin 2473325..2473972 Escherichia coli UM146 12700894 YP_006111284.1 CDS UM146_12015 NC_017632.1 2474106 2474666 D hypothetical protein 2474106..2474666 Escherichia coli UM146 12700895 YP_006111285.1 CDS UM146_12020 NC_017632.1 2474772 2475818 D COG0418 Dihydroorotase; dihydroorotase 2474772..2475818 Escherichia coli UM146 12700896 YP_006111286.1 CDS UM146_12025 NC_017632.1 2475892 2476137 D DNA damage-inducible protein I 2475892..2476137 Escherichia coli UM146 12700897 YP_006111287.1 CDS bssS NC_017632.1 2476424 2476681 D biofilm formation regulatory protein BssS 2476424..2476681 Escherichia coli UM146 12700898 YP_006111288.1 CDS solA NC_017632.1 2476796 2477914 D COG0665 Glycine/D-amino acid oxidases (deaminating); N-methyltryptophan oxidase 2476796..2477914 Escherichia coli UM146 12700899 YP_006111289.1 CDS UM146_12040 NC_017632.1 2477962 2478075 D hypothetical protein 2477962..2478075 Escherichia coli UM146 12700900 YP_006111290.1 CDS UM146_12045 NC_017632.1 2478336 2478902 D COG3038 Cytochrome B561; putative cytochrome b561 2478336..2478902 Escherichia coli UM146 12700901 YP_006111291.1 CDS UM146_12050 NC_017632.1 2478906 2479481 D COG2353 Uncharacterized conserved protein; hypothetical protein 2478906..2479481 Escherichia coli UM146 12700902 YP_006111292.1 CDS UM146_12055 NC_017632.1 2479523 2480575 R COG1054 Predicted sulfurtransferase; hypothetical protein complement(2479523..2480575) Escherichia coli UM146 12700903 YP_006111293.1 CDS UM146_12060 NC_017632.1 2480800 2481720 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 2480800..2481720 Escherichia coli UM146 12700904 YP_006111294.1 CDS UM146_12065 NC_017632.1 2481892 2483118 D COG0477 Permeases of the major facilitator superfamily; drug efflux system protein MdtG 2481892..2483118 Escherichia coli UM146 12700905 YP_006111295.1 CDS UM146_12070 NC_017632.1 2483201 2483575 D hypothetical protein 2483201..2483575 Escherichia coli UM146 12700906 YP_006111296.1 CDS UM146_12075 NC_017632.1 2483576 2483803 R COG5645 Predicted periplasmic lipoprotein; hypothetical protein complement(2483576..2483803) Escherichia coli UM146 12700907 YP_006111297.1 CDS UM146_12080 NC_017632.1 2483975 2486518 R COG2943 Membrane glycosyltransferase; glucosyltransferase MdoH complement(2483975..2486518) Escherichia coli UM146 12700908 YP_006111298.1 CDS mdoG NC_017632.1 2486511 2488064 R COG3131 Periplasmic glucans biosynthesis protein; glucan biosynthesis protein G complement(2486511..2488064) Escherichia coli UM146 12700909 YP_006111299.1 CDS mdoC NC_017632.1 2488440 2489597 D glucans biosynthesis protein 2488440..2489597 Escherichia coli UM146 12700910 YP_006111300.1 CDS UM146_12095 NC_017632.1 2489605 2491026 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; putative synthase complement(2489605..2491026) Escherichia coli UM146 12700911 YP_006111301.1 CDS UM146_12100 NC_017632.1 2491028 2491561 R COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; hypothetical protein complement(2491028..2491561) Escherichia coli UM146 12700912 YP_006111302.1 CDS UM146_12105 NC_017632.1 2491656 2491967 R hypothetical protein complement(2491656..2491967) Escherichia coli UM146 12700913 YP_006111303.1 CDS csgC NC_017632.1 2492088 2492420 R putative autoagglutination protein complement(2492088..2492420) Escherichia coli UM146 12700914 YP_006111304.1 CDS UM146_12115 NC_017632.1 2492478 2492933 R cryptic curlin major subunit complement(2492478..2492933) Escherichia coli UM146 12700915 YP_006111305.1 CDS UM146_12120 NC_017632.1 2492974 2493429 R curlin minor subunit complement(2492974..2493429) Escherichia coli UM146 12700916 YP_006111306.1 CDS UM146_12125 NC_017632.1 2494182 2494832 D COG2771 DNA-binding HTH domain-containing proteins; DNA-binding transcriptional regulator CsgD 2494182..2494832 Escherichia coli UM146 12700917 YP_006111307.1 CDS UM146_12130 NC_017632.1 2494837 2495226 D COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; curli assembly protein CsgE 2494837..2495226 Escherichia coli UM146 12700918 YP_006111308.1 CDS UM146_12135 NC_017632.1 2495251 2495667 D curli assembly protein CsgF 2495251..2495667 Escherichia coli UM146 12700919 YP_006111309.1 CDS UM146_12140 NC_017632.1 2495694 2496527 D COG1462 Uncharacterized protein involved in formation of curli polymers; curli production assembly/transport component CsgG 2495694..2496527 Escherichia coli UM146 12700920 YP_006111310.1 CDS UM146_12145 NC_017632.1 2496592 2497113 R inner membrane protein YcdZ complement(2496592..2497113) Escherichia coli UM146 12700921 YP_006111311.1 CDS UM146_12150 NC_017632.1 2497185 2497739 R COG3381 Uncharacterized component of anaerobic dehydrogenases; hypothetical protein complement(2497185..2497739) Escherichia coli UM146 12700922 YP_006111312.1 CDS UM146_12155 NC_017632.1 2497763 2498500 R COG1387 Histidinol phosphatase and related hydrolases of the PHP family; putative hydrolase complement(2497763..2498500) Escherichia coli UM146 12700923 YP_006111313.1 CDS UM146_12160 NC_017632.1 2498555 2499493 R COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; putative dehydrogenase complement(2498555..2499493) Escherichia coli UM146 12700924 YP_006111314.1 CDS UM146_12165 NC_017632.1 2499964 2500806 R hypothetical protein complement(2499964..2500806) Escherichia coli UM146 12700926 YP_006111315.1 CDS UM146_12170 NC_017632.1 2500899 2501096 R hypothetical protein complement(2500899..2501096) Escherichia coli UM146 12700927 YP_006111316.1 CDS UM146_12175 NC_017632.1 2501108 2501596 R hypothetical protein complement(2501108..2501596) Escherichia coli UM146 12700928 YP_006111317.1 CDS UM146_12180 NC_017632.1 2501596 2501970 R hypothetical protein complement(2501596..2501970) Escherichia coli UM146 12700929 YP_006111318.1 CDS UM146_12185 NC_017632.1 2502017 2502394 R hypothetical protein complement(2502017..2502394) Escherichia coli UM146 12700930 YP_006111319.1 CDS UM146_12190 NC_017632.1 2502444 2503088 R hypothetical protein complement(2502444..2503088) Escherichia coli UM146 12700931 YP_006111320.1 CDS UM146_12195 NC_017632.1 2503107 2503328 R hypothetical protein complement(2503107..2503328) Escherichia coli UM146 12700932 YP_006111321.1 CDS UM146_12200 NC_017632.1 2503391 2503867 R COG2003 DNA repair proteins; putative DNA repair protein complement(2503391..2503867) Escherichia coli UM146 12700933 YP_006111322.1 CDS UM146_12205 NC_017632.1 2503883 2504356 R hypothetical protein complement(2503883..2504356) Escherichia coli UM146 12700934 YP_006111323.1 CDS UM146_12210 NC_017632.1 2504450 2504695 R hypothetical protein complement(2504450..2504695) Escherichia coli UM146 12700935 YP_006111324.1 CDS UM146_12215 NC_017632.1 2504695 2505516 R hypothetical protein complement(2504695..2505516) Escherichia coli UM146 12700936 YP_006111325.1 CDS UM146_12220 NC_017632.1 2505847 2508693 R COG3468 Type V secretory pathway, adhesin AidA; putative AidA-I adhesin-like protein complement(2505847..2508693) Escherichia coli UM146 12700937 YP_006111326.1 CDS UM146_12225 NC_017632.1 2509066 2509938 R COG3596 Predicted GTPase; hypothetical protein complement(2509066..2509938) Escherichia coli UM146 12700938 YP_006111327.1 CDS UM146_12230 NC_017632.1 2510292 2510534 D COG0286 Type I restriction-modification system methyltransferase subunit; hypothetical protein 2510292..2510534 Escherichia coli UM146 12700939 YP_006111328.1 CDS UM146_12235 NC_017632.1 2510825 2511058 D hypothetical protein 2510825..2511058 Escherichia coli UM146 12700940 YP_006111329.1 CDS UM146_12240 NC_017632.1 2512908 2513030 R hypothetical protein complement(2512908..2513030) Escherichia coli UM146 12700941 YP_006111330.1 CDS UM146_12245 NC_017632.1 2513024 2513449 R hypothetical protein complement(2513024..2513449) Escherichia coli UM146 12700942 YP_006111331.1 CDS UM146_12250 NC_017632.1 2513485 2514621 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(2513485..2514621) Escherichia coli UM146 12700943 YP_006111332.1 CDS UM146_12255 NC_017632.1 2515282 2515464 D COG3436 Transposase and inactivated derivatives; hypothetical protein 2515282..2515464 Escherichia coli UM146 12700944 YP_006111333.1 CDS UM146_12260 NC_017632.1 2515571 2516770 R COG0523 Putative GTPases (G3E family); putative cobalamin synthesis protein complement(2515571..2516770) Escherichia coli UM146 12700945 YP_006111334.1 CDS UM146_12265 NC_017632.1 2517034 2517825 R COG5266 ABC-type Co2+ transport system, periplasmic component; hypothetical protein complement(2517034..2517825) Escherichia coli UM146 12700946 YP_006111335.1 CDS UM146_12270 NC_017632.1 2517844 2519814 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent receptor complement(2517844..2519814) Escherichia coli UM146 12700947 YP_006111336.1 CDS UM146_12275 NC_017632.1 2521179 2521523 D putative transposase 2521179..2521523 Escherichia coli UM146 12700948 YP_006111337.1 CDS UM146_12280 NC_017632.1 2522086 2522553 R putative inner membrane protein complement(2522086..2522553) Escherichia coli UM146 12700950 YP_006111338.1 CDS UM146_12285 NC_017632.1 2523431 2523748 D IS4 orf 2523431..2523748 Escherichia coli UM146 12700951 YP_006111339.1 CDS UM146_12290 NC_017632.1 2523787 2524101 R hypothetical protein complement(2523787..2524101) Escherichia coli UM146 12700952 YP_006111340.1 CDS UM146_12295 NC_017632.1 2524643 2525758 D COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase; Salmochelin siderophore glycosyltransferase IroB 2524643..2525758 Escherichia coli UM146 12700953 YP_006111341.1 CDS UM146_12300 NC_017632.1 2525898 2529557 D COG1132 ABC-type multidrug transport system, ATPase and permease components; hypothetical protein 2525898..2529557 Escherichia coli UM146 12700954 YP_006111342.1 CDS UM146_12305 NC_017632.1 2529661 2530890 D COG2382 Enterochelin esterase and related enzymes; IroD, putative ferric enterochelin esterase 2529661..2530890 Escherichia coli UM146 12700955 YP_006111343.1 CDS UM146_12310 NC_017632.1 2530975 2531931 D COG2819 Predicted hydrolase of the alpha/beta superfamily; hypothetical protein 2530975..2531931 Escherichia coli UM146 12700956 YP_006111344.1 CDS UM146_12315 NC_017632.1 2531976 2534153 R COG4771 Outer membrane receptor for ferrienterochelin and colicins; outer membrane receptor FepA complement(2531976..2534153) Escherichia coli UM146 12700957 YP_006111345.1 CDS UM146_12320 NC_017632.1 2534647 2534976 R COG1846 Transcriptional regulators; MarR family transcriptional regulator complement(2534647..2534976) Escherichia coli UM146 12700958 YP_006111346.1 CDS UM146_12325 NC_017632.1 2535344 2536084 R COG2200 FOG: EAL domain; hypothetical protein complement(2535344..2536084) Escherichia coli UM146 12700959 YP_006111347.1 CDS UM146_12330 NC_017632.1 2536388 2537356 R F1C putative fimbrial adhesin precursor complement(2536388..2537356) Escherichia coli UM146 12700960 YP_006111348.1 CDS UM146_12335 NC_017632.1 2537349 2537840 R COG3539 P pilus assembly protein, pilin FimA; F1C minor fimbrial subunit protein G precursor complement(2537349..2537840) Escherichia coli UM146 12700961 YP_006111349.1 CDS UM146_12340 NC_017632.1 2537862 2538389 R COG3539 P pilus assembly protein, pilin FimA; F1C minor fimbrial subunit F complement(2537862..2538389) Escherichia coli UM146 12700962 YP_006111350.1 CDS UM146_12345 NC_017632.1 2538402 2541032 R COG3188 P pilus assembly protein, porin PapC; F1C fimbrial usher complement(2538402..2541032) Escherichia coli UM146 12700963 YP_006111351.1 CDS UM146_12350 NC_017632.1 2541102 2541797 R COG3121 P pilus assembly protein, chaperone PapD; F1C periplasmic chaperone complement(2541102..2541797) Escherichia coli UM146 12700964 YP_006111352.1 CDS UM146_12355 NC_017632.1 2541838 2542377 R COG3539 P pilus assembly protein, pilin FimA; putative minor F1C fimbrial subunit precursor complement(2541838..2542377) Escherichia coli UM146 12700965 YP_006111353.1 CDS UM146_12360 NC_017632.1 2542448 2542993 R COG3539 P pilus assembly protein, pilin FimA; S-fimbrial protein subunit complement(2542448..2542993) Escherichia coli UM146 12700966 YP_006111354.1 CDS UM146_12365 NC_017632.1 2543368 2543697 R major pilu subunit operon regulatory protein PapB complement(2543368..2543697) Escherichia coli UM146 12700967 YP_006111355.1 CDS UM146_12370 NC_017632.1 2544116 2544337 D fimbrial transcription regulator protein FaeA 2544116..2544337 Escherichia coli UM146 12700968 YP_006111356.1 CDS UM146_12375 NC_017632.1 2544612 2545181 R hypothetical protein complement(2544612..2545181) Escherichia coli UM146 12700969 YP_006111357.1 CDS UM146_12380 NC_017632.1 2546232 2546573 D COG2721 Altronate dehydratase; galactarate dehydratase 2546232..2546573 Escherichia coli UM146 12700970 YP_006111358.1 CDS UM146_12385 NC_017632.1 2546765 2546962 D COG2721 Altronate dehydratase; putative hydrolase 2546765..2546962 Escherichia coli UM146 12700971 YP_006111359.1 CDS UM146_12390 NC_017632.1 2546981 2547481 D COG2721 Altronate dehydratase; (D)-galactarate dehydrogenase 2546981..2547481 Escherichia coli UM146 12700972 YP_006111360.1 CDS UM146_12395 NC_017632.1 2547544 2547825 R COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional regulator AgaR complement(2547544..2547825) Escherichia coli UM146 12700973 YP_006111361.1 CDS UM146_12400 NC_017632.1 2547863 2548114 R COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional regulator AgaR complement(2547863..2548114) Escherichia coli UM146 12700974 YP_006111362.1 CDS UM146_12405 NC_017632.1 2548363 2548986 D COG4573 Predicted tagatose 6-phosphate kinase; hypothetical protein 2548363..2548986 Escherichia coli UM146 12700975 YP_006111363.1 CDS kbaY NC_017632.1 2549231 2549326 D COG0191 Fructose/tagatose bisphosphate aldolase; tagatose-bisphosphate aldolase 2549231..2549326 Escherichia coli UM146 12700976 YP_006111364.1 CDS UM146_12415 NC_017632.1 2549319 2549399 D hypothetical protein 2549319..2549399 Escherichia coli UM146 12700977 YP_006111365.1 CDS UM146_12420 NC_017632.1 2549411 2550574 D COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; hypothetical protein 2549411..2550574 Escherichia coli UM146 12700978 YP_006111366.1 CDS UM146_12425 NC_017632.1 2550600 2552489 D COG3345 Alpha-galactosidase; enterotoxin 2550600..2552489 Escherichia coli UM146 12700979 YP_006111367.1 CDS UM146_12430 NC_017632.1 2552556 2552645 R hypothetical protein complement(2552556..2552645) Escherichia coli UM146 12700980 YP_006111368.1 CDS UM146_12435 NC_017632.1 2552658 2552864 R COG0313 Predicted methyltransferases; putative methyltransferase complement(2552658..2552864) Escherichia coli UM146 12700981 YP_006111369.1 CDS UM146_12440 NC_017632.1 2552966 2553559 R hypothetical protein complement(2552966..2553559) Escherichia coli UM146 12700982 YP_006111370.1 CDS UM146_12445 NC_017632.1 2553608 2553709 D hypothetical protein 2553608..2553709 Escherichia coli UM146 12700983 YP_006111371.1 CDS UM146_12450 NC_017632.1 2554511 2555704 R hypothetical protein complement(2554511..2555704) Escherichia coli UM146 12700984 YP_006111372.1 CDS UM146_12455 NC_017632.1 2556590 2556898 R COG3311 Predicted transcriptional regulator; putative regulatory protein complement(2556590..2556898) Escherichia coli UM146 12700985 YP_006111373.1 CDS UM146_12460 NC_017632.1 2557039 2557503 R COG1662 Transposase and inactivated derivatives, IS1 family; putative IS1nuxi transposase complement(2557039..2557503) Escherichia coli UM146 12700986 YP_006111374.1 CDS UM146_12465 NC_017632.1 2557551 2557715 R iso-IS1 ORF1 complement(2557551..2557715) Escherichia coli UM146 12700987 YP_006111375.1 CDS UM146_12470 NC_017632.1 2558000 2559817 D hypothetical protein 2558000..2559817 Escherichia coli UM146 12700988 YP_006111376.1 CDS UM146_12475 NC_017632.1 2560004 2561206 R COG0582 Integrase; putative integrase complement(2560004..2561206) Escherichia coli UM146 12700989 YP_006111377.1 CDS UM146_12480 NC_017632.1 2561384 2561488 R hypothetical protein complement(2561384..2561488) Escherichia coli UM146 12700990 YP_006111378.1 CDS UM146_12485 NC_017632.1 2561485 2562852 R COG2199 FOG: GGDEF domain; putative diguanylate cyclase complement(2561485..2562852) Escherichia coli UM146 12700991 YP_006111379.1 CDS pgaA NC_017632.1 2563440 2565863 D outer membrane protein PgaA 2563440..2565863 Escherichia coli UM146 12700992 YP_006111380.1 CDS pgaB NC_017632.1 2565872 2567890 D COG0726 Predicted xylanase/chitin deacetylase; outer membrane N-deacetylase 2565872..2567890 Escherichia coli UM146 12700993 YP_006111381.1 CDS UM146_12500 NC_017632.1 2567883 2569208 D COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; N-glycosyltransferase 2567883..2569208 Escherichia coli UM146 12700994 YP_006111382.1 CDS pgaD NC_017632.1 2569210 2569623 D putative PGA biosynthesis protein 2569210..2569623 Escherichia coli UM146 12700995 YP_006111383.1 CDS UM146_12510 NC_017632.1 2569673 2570461 R COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase; hypothetical protein complement(2569673..2570461) Escherichia coli UM146 12700996 YP_006111384.1 CDS UM146_12515 NC_017632.1 2571087 2572358 R COG2837 Predicted iron-dependent peroxidase; iron transport heme-binding periplasmic protein complement(2571087..2572358) Escherichia coli UM146 12700997 YP_006111385.1 CDS UM146_12520 NC_017632.1 2572364 2573491 R COG2822 Predicted periplasmic lipoprotein involved in iron transport; hypothetical protein complement(2572364..2573491) Escherichia coli UM146 12700998 YP_006111386.1 CDS UM146_12525 NC_017632.1 2573549 2574379 R COG0672 High-affinity Fe2+/Pb2+ permease; hypothetical protein complement(2573549..2574379) Escherichia coli UM146 12700999 YP_006111387.1 CDS UM146_12530 NC_017632.1 2574599 2576107 R COG0591 Na+/proline symporter; proline:sodium symporter complement(2574599..2576107) Escherichia coli UM146 12701000 YP_006111388.1 CDS UM146_12535 NC_017632.1 2576266 2576475 R hypothetical protein complement(2576266..2576475) Escherichia coli UM146 12701001 YP_006111389.1 CDS putA NC_017632.1 2576530 2580492 D COG0506 Proline dehydrogenase; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 2576530..2580492 Escherichia coli UM146 12701002 YP_006111390.1 CDS UM146_12545 NC_017632.1 2580532 2581170 R COG1309 Transcriptional regulator; putative tet operon regulator complement(2580532..2581170) Escherichia coli UM146 12701003 YP_006111391.1 CDS UM146_12550 NC_017632.1 2581457 2582548 D COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; monooxygenase 2581457..2582548 Escherichia coli UM146 12701004 YP_006111392.1 CDS UM146_12555 NC_017632.1 2582548 2583240 D COG1335 Amidases related to nicotinamidase; enzyme of the alternative pyrimidine degradation pathway 2582548..2583240 Escherichia coli UM146 12701005 YP_006111393.1 CDS UM146_12560 NC_017632.1 2583252 2583638 D COG0251 Putative translation initiation inhibitor, yjgF family; hypothetical protein 2583252..2583638 Escherichia coli UM146 12701006 YP_006111394.1 CDS UM146_12565 NC_017632.1 2583646 2584446 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); enzyme of the alternative pyrimidine degradation pathway 2583646..2584446 Escherichia coli UM146 12701007 YP_006111395.1 CDS UM146_12570 NC_017632.1 2584456 2585046 D COG0778 Nitroreductase; hypothetical protein 2584456..2585046 Escherichia coli UM146 12701008 YP_006111396.1 CDS UM146_12575 NC_017632.1 2585057 2585551 D COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; flavin:NADH oxidoreductase subunit of alternative pyrimidine degradation pathway 2585057..2585551 Escherichia coli UM146 12701009 YP_006111397.1 CDS UM146_12580 NC_017632.1 2585572 2586102 D COG2233 Xanthine/uracil permeases; pyrimidine transporter 2585572..2586102 Escherichia coli UM146 12701010 YP_006111398.1 CDS UM146_12585 NC_017632.1 2586102 2586794 D COG2233 Xanthine/uracil permeases; transporter 2586102..2586794 Escherichia coli UM146 12701011 YP_006111399.1 CDS UM146_12590 NC_017632.1 2586877 2587050 R COG3729 General stress protein; hypothetical protein complement(2586877..2587050) Escherichia coli UM146 12701012 YP_006111400.1 CDS UM146_12595 NC_017632.1 2587423 2588019 D COG0655 Multimeric flavodoxin WrbA; TrpR binding protein WrbA 2587423..2588019 Escherichia coli UM146 12701013 YP_006111401.1 CDS UM146_12600 NC_017632.1 2588040 2588267 D hypothetical protein 2588040..2588267 Escherichia coli UM146 12701014 YP_006111402.1 CDS UM146_12605 NC_017632.1 2588305 2589546 R glucose-1-phosphatase/inositol phosphatase complement(2588305..2589546) Escherichia coli UM146 12701015 YP_006111403.1 CDS UM146_12610 NC_017632.1 2590081 2591001 D COG2214 DnaJ-class molecular chaperone; curved DNA-binding protein CbpA 2590081..2591001 Escherichia coli UM146 12701016 YP_006111404.1 CDS UM146_12615 NC_017632.1 2591001 2591306 D chaperone-modulator protein CbpM 2591001..2591306 Escherichia coli UM146 12701017 YP_006111405.1 CDS torD NC_017632.1 2591662 2592261 R COG3381 Uncharacterized component of anaerobic dehydrogenases; chaperone protein TorD complement(2591662..2592261) Escherichia coli UM146 12701018 YP_006111406.1 CDS UM146_12625 NC_017632.1 2592258 2594804 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; trimethylamine N-oxide (TMAO) reductase I, catalytic subunit complement(2592258..2594804) Escherichia coli UM146 12701019 YP_006111407.1 CDS UM146_12630 NC_017632.1 2594804 2595976 R COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit; trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit complement(2594804..2595976) Escherichia coli UM146 12701020 YP_006111408.1 CDS UM146_12635 NC_017632.1 2596116 2596808 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator TorR 2596116..2596808 Escherichia coli UM146 12701021 YP_006111409.1 CDS UM146_12640 NC_017632.1 2596781 2597809 R COG1879 ABC-type sugar transport system, periplasmic component; TMAO reductase system periplasmic protein TorT complement(2596781..2597809) Escherichia coli UM146 12701022 YP_006111410.1 CDS UM146_12645 NC_017632.1 2597892 2600624 D COG0642 Signal transduction histidine kinase; hybrid sensory histidine kinase TorS 2597892..2600624 Escherichia coli UM146 12701023 YP_006111411.1 CDS UM146_12650 NC_017632.1 2600707 2601780 D COG0348 Polyferredoxin; putative 4Fe-4S membrane protein 2600707..2601780 Escherichia coli UM146 12701024 YP_006111412.1 CDS UM146_12655 NC_017632.1 2601829 2602002 R putative regulator of phosphatidylethanolamine synthesis complement(2601829..2602002) Escherichia coli UM146 12701025 YP_006111413.1 CDS UM146_12660 NC_017632.1 2601992 2602255 R cold shock protein complement(2601992..2602255) Escherichia coli UM146 12701026 YP_006111414.1 CDS UM146_12665 NC_017632.1 2602396 2602608 R COG1278 Cold shock proteins; cold shock protein CspG complement(2602396..2602608) Escherichia coli UM146 12701027 YP_006111415.1 CDS UM146_12670 NC_017632.1 2602894 2603106 D COG1278 Cold shock proteins; Cold shock-like protein cspH 2602894..2603106 Escherichia coli UM146 12701028 YP_006111416.1 CDS UM146_12675 NC_017632.1 2603094 2604434 R phosphoanhydride phosphorylase complement(2603094..2604434) Escherichia coli UM146 12701029 YP_006111417.1 CDS UM146_12680 NC_017632.1 2604484 2604576 R membrane protein complement(2604484..2604576) Escherichia coli UM146 12701030 YP_006111418.1 CDS UM146_12685 NC_017632.1 2604589 2605725 R COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome bd-II oxidase subunit II complement(2604589..2605725) Escherichia coli UM146 12701031 YP_006111419.1 CDS UM146_12690 NC_017632.1 2605737 2607281 R COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome bd-II oxidase subunit I complement(2605737..2607281) Escherichia coli UM146 12701032 YP_006111420.1 CDS UM146_12695 NC_017632.1 2607415 2608272 R hydrogenase-1 operon protein HyaF complement(2607415..2608272) Escherichia coli UM146 12701033 YP_006111421.1 CDS UM146_12700 NC_017632.1 2608269 2608667 R COG0526 Thiol-disulfide isomerase and thioredoxins; hydrogenase-1 operon protein HyaE complement(2608269..2608667) Escherichia coli UM146 12701034 YP_006111422.1 CDS UM146_12705 NC_017632.1 2608664 2609251 R COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 1 maturation protease complement(2608664..2609251) Escherichia coli UM146 12701035 YP_006111423.1 CDS UM146_12710 NC_017632.1 2609248 2609955 R COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; hydrogenase 1 b-type cytochrome subunit complement(2609248..2609955) Escherichia coli UM146 12701036 YP_006111424.1 CDS UM146_12715 NC_017632.1 2609974 2611767 R COG0374 Ni,Fe-hydrogenase I large subunit; hydrogenase 1 large subunit complement(2609974..2611767) Escherichia coli UM146 12701037 YP_006111425.1 CDS UM146_12720 NC_017632.1 2611764 2612882 R COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase-1 small subunit complement(2611764..2612882) Escherichia coli UM146 12701038 YP_006111426.1 CDS UM146_12725 NC_017632.1 2613603 2614262 D COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein 2613603..2614262 Escherichia coli UM146 12701040 YP_006111427.1 CDS UM146_12730 NC_017632.1 2614354 2614683 D COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit; sulfur transfer protein TusE 2614354..2614683 Escherichia coli UM146 12701041 YP_006111428.1 CDS UM146_12735 NC_017632.1 2614680 2614958 R COG1254 Acylphosphatases; acylphosphatase complement(2614680..2614958) Escherichia coli UM146 12701042 YP_006111429.1 CDS UM146_12740 NC_017632.1 2615053 2616243 D COG1092 Predicted SAM-dependent methyltransferases; ribosomal RNA large subunit methyltransferase I 2615053..2616243 Escherichia coli UM146 12701043 YP_006111430.1 CDS UM146_12745 NC_017632.1 2616301 2616618 D COG3785 Uncharacterized conserved protein; heat shock protein HspQ 2616301..2616618 Escherichia coli UM146 12701044 YP_006111431.1 CDS UM146_12750 NC_017632.1 2616663 2617076 R COG1832 Predicted CoA-binding protein; hypothetical protein complement(2616663..2617076) Escherichia coli UM146 12701045 YP_006111432.1 CDS UM146_12755 NC_017632.1 2617249 2617911 D COG3110 Uncharacterized protein conserved in bacteria; hypothetical protein 2617249..2617911 Escherichia coli UM146 12701046 YP_006111433.1 CDS mgsA NC_017632.1 2618007 2618465 D COG1803 Methylglyoxal synthase; methylglyoxal synthase 2618007..2618465 Escherichia coli UM146 12701047 YP_006111434.1 CDS helD NC_017632.1 2618497 2620551 R COG0210 Superfamily I DNA and RNA helicases; DNA helicase IV complement(2618497..2620551) Escherichia coli UM146 12701048 YP_006111435.1 CDS UM146_12770 NC_017632.1 2620674 2621120 D COG3304 Predicted membrane protein; hypothetical protein 2620674..2621120 Escherichia coli UM146 12701049 YP_006111436.1 CDS UM146_12775 NC_017632.1 2621130 2623292 D COG1289 Predicted membrane protein; hypothetical protein 2621130..2623292 Escherichia coli UM146 12701050 YP_006111437.1 CDS UM146_12780 NC_017632.1 2623255 2623884 R COG3070 Regulator of competence-specific genes; hypothetical protein complement(2623255..2623884) Escherichia coli UM146 12701051 YP_006111438.1 CDS UM146_12785 NC_017632.1 2624103 2624612 D COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation; SOS cell division inhibitor 2624103..2624612 Escherichia coli UM146 12701052 YP_006111439.1 CDS UM146_12790 NC_017632.1 2624911 2626008 D COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; outer membrane protein A 2624911..2626008 Escherichia coli UM146 12701053 YP_006111440.1 CDS UM146_12795 NC_017632.1 2626085 2626537 R COG3120 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2626085..2626537) Escherichia coli UM146 12701054 YP_006111441.1 CDS UM146_12800 NC_017632.1 2626723 2628483 D COG1067 Predicted ATP-dependent protease; putative ATP-dependent protease 2626723..2628483 Escherichia coli UM146 12701055 YP_006111442.1 CDS UM146_12805 NC_017632.1 2628444 2629070 D COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; 3-hydroxydecanoyl-ACP dehydratase 2628444..2629070 Escherichia coli UM146 12701056 YP_006111443.1 CDS UM146_12810 NC_017632.1 2629140 2629307 R COG3130 Ribosome modulation factor; ribosome modulation factor complement(2629140..2629307) Escherichia coli UM146 12701057 YP_006111444.1 CDS UM146_12815 NC_017632.1 2629562 2630125 R COG3009 Uncharacterized protein conserved in bacteria; putative lipoprotein complement(2629562..2630125) Escherichia coli UM146 12701058 YP_006111445.1 CDS UM146_12820 NC_017632.1 2630122 2631762 R COG3008 Paraquat-inducible protein B; paraquat-inducible protein B complement(2630122..2631762) Escherichia coli UM146 12701059 YP_006111446.1 CDS UM146_12825 NC_017632.1 2631767 2633020 R COG2995 Uncharacterized paraquat-inducible protein A; paraquat-inducible protein A complement(2631767..2633020) Escherichia coli UM146 12701060 YP_006111447.1 CDS UM146_12830 NC_017632.1 2633150 2635057 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATPase complement(2633150..2635057) Escherichia coli UM146 12701061 YP_006111448.1 CDS rlmL NC_017632.1 2635069 2637177 R COG0116 Predicted N6-adenine-specific DNA methylase; 23S rRNA m(2)G2445 methyltransferase complement(2635069..2637177) Escherichia coli UM146 12701062 YP_006111449.1 CDS UM146_12840 NC_017632.1 2637275 2638384 D COG3217 Uncharacterized Fe-S protein; putative 2Fe-2S cluster-containing protein 2637275..2638384 Escherichia coli UM146 12701063 YP_006111450.1 CDS UM146_12845 NC_017632.1 2638381 2638923 R hypothetical protein complement(2638381..2638923) Escherichia coli UM146 12701064 YP_006111451.1 CDS UM146_12850 NC_017632.1 2639097 2640107 R COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 complement(2639097..2640107) Escherichia coli UM146 12701065 YP_006111452.1 CDS UM146_12855 NC_017632.1 2640344 2640919 D COG0431 Predicted flavoprotein; NAD(P)H-dependent FMN reductase 2640344..2640919 Escherichia coli UM146 12701066 YP_006111453.1 CDS UM146_12870 NC_017632.1 2641867 2643012 D COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; alkanesulfonate monooxygenase 2641867..2643012 Escherichia coli UM146 12701067 YP_006111454.1 CDS ssuC NC_017632.1 2643024 2643815 D COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; alkanesulfonate transporter permease 2643024..2643815 Escherichia coli UM146 12701068 YP_006111455.1 CDS ssuB NC_017632.1 2643812 2644579 D COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; aliphatic sulfonates transport ATP-binding subunit 2643812..2644579 Escherichia coli UM146 12701069 YP_006111456.1 CDS pepN NC_017632.1 2644774 2647386 R COG0308 Aminopeptidase N; aminopeptidase N complement(2644774..2647386) Escherichia coli UM146 12701070 YP_006111457.1 CDS UM146_12890 NC_017632.1 2647652 2648854 D COG1488 Nicotinic acid phosphoribosyltransferase; nicotinate phosphoribosyltransferase 2647652..2648854 Escherichia coli UM146 12701071 YP_006111458.1 CDS asnC NC_017632.1 2649022 2650422 D COG0017 Aspartyl/asparaginyl-tRNA synthetases; asparaginyl-tRNA synthetase 2649022..2650422 Escherichia coli UM146 12701072 YP_006111459.1 CDS UM146_12900 NC_017632.1 2651024 2652112 D COG3203 Outer membrane protein (porin); outer membrane protein F 2651024..2652112 Escherichia coli UM146 12701073 YP_006111460.1 CDS UM146_12905 NC_017632.1 2652109 2652297 R hypothetical protein complement(2652109..2652297) Escherichia coli UM146 12701074 YP_006111461.1 CDS UM146_12910 NC_017632.1 2652296 2653486 D COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase 2652296..2653486 Escherichia coli UM146 12701075 YP_006111462.1 CDS UM146_12915 NC_017632.1 2653536 2654183 R COG0491 Zn-dependent hydrolases, including glyoxylases; Metallo-beta-lactamase family protein complement(2653536..2654183) Escherichia coli UM146 12701076 YP_006111463.1 CDS UM146_12920 NC_017632.1 2654210 2654758 R COG3108 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2654210..2654758) Escherichia coli UM146 12701077 YP_006111464.1 CDS UM146_12925 NC_017632.1 2654939 2656786 R COG2989 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2654939..2656786) Escherichia coli UM146 12701078 YP_006111465.1 CDS mukB NC_017632.1 2657047 2661507 R COG3096 Uncharacterized protein involved in chromosome partitioning; cell division protein MukB complement(2657047..2661507) Escherichia coli UM146 12701079 YP_006111466.1 CDS UM146_12935 NC_017632.1 2661507 2662211 R COG3095 Uncharacterized protein involved in chromosome partitioning; condesin subunit E complement(2661507..2662211) Escherichia coli UM146 12701080 YP_006111467.1 CDS UM146_12940 NC_017632.1 2662192 2663514 R COG3006 Uncharacterized protein involved in chromosome partitioning; condesin subunit F complement(2662192..2663514) Escherichia coli UM146 12701081 YP_006111468.1 CDS UM146_12945 NC_017632.1 2663511 2664296 R COG0500 SAM-dependent methyltransferases; putative metallothionein SmtA complement(2663511..2664296) Escherichia coli UM146 12701082 YP_006111469.1 CDS UM146_12950 NC_017632.1 2664432 2665211 D COG1434 Uncharacterized conserved protein; hypothetical protein 2664432..2665211 Escherichia coli UM146 12701083 YP_006111470.1 CDS UM146_12955 NC_017632.1 2665188 2666081 R hypothetical protein complement(2665188..2666081) Escherichia coli UM146 12701084 YP_006111471.1 CDS UM146_12960 NC_017632.1 2666235 2666981 R COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(2666235..2666981) Escherichia coli UM146 12701085 YP_006111472.1 CDS UM146_12965 NC_017632.1 2666978 2667160 R COG2835 Uncharacterized conserved protein; hypothetical protein complement(2666978..2667160) Escherichia coli UM146 12701086 YP_006111473.1 CDS UM146_12970 NC_017632.1 2667212 2668444 R COG3214 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2667212..2668444) Escherichia coli UM146 12701087 YP_006111474.1 CDS lpxK NC_017632.1 2668481 2669467 R COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(2668481..2669467) Escherichia coli UM146 12701088 YP_006111475.1 CDS UM146_12980 NC_017632.1 2669464 2671212 R COG1132 ABC-type multidrug transport system, ATPase and permease components; lipid transporter ATP-binding/permease complement(2669464..2671212) Escherichia coli UM146 12701089 YP_006111476.1 CDS UM146_12985 NC_017632.1 2671249 2673513 R COG0658 Predicted membrane metal-binding protein; hypothetical protein complement(2671249..2673513) Escherichia coli UM146 12701090 YP_006111477.1 CDS ihfB NC_017632.1 2673719 2674003 R COG0776 Bacterial nucleoid DNA-binding protein; integration host factor subunit beta complement(2673719..2674003) Escherichia coli UM146 12701091 YP_006111478.1 CDS rpsA NC_017632.1 2674163 2675836 R COG0539 Ribosomal protein S1; 30S ribosomal protein S1 complement(2674163..2675836) Escherichia coli UM146 12701092 YP_006111479.1 CDS cmk NC_017632.1 2675947 2676630 R COG0283 Cytidylate kinase; cytidylate kinase complement(2675947..2676630) Escherichia coli UM146 12701093 YP_006111480.1 CDS UM146_13005 NC_017632.1 2676803 2677567 R COG0501 Zn-dependent protease with chaperone function; putative lipoprotein with metallohydrolase domain complement(2676803..2677567) Escherichia coli UM146 12701094 YP_006111481.1 CDS UM146_13010 NC_017632.1 2677736 2679019 R COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase complement(2677736..2679019) Escherichia coli UM146 12701095 YP_006111482.1 CDS UM146_13015 NC_017632.1 2679090 2680178 R COG1932 Phosphoserine aminotransferase; phosphoserine aminotransferase complement(2679090..2680178) Escherichia coli UM146 12701096 YP_006111483.1 CDS UM146_13020 NC_017632.1 2680377 2681069 R COG2323 Predicted membrane protein; hypothetical protein complement(2680377..2681069) Escherichia coli UM146 12701097 YP_006111484.1 CDS UM146_13025 NC_017632.1 2681199 2682959 D COG1944 Uncharacterized conserved protein; hypothetical protein 2681199..2682959 Escherichia coli UM146 12701098 YP_006111485.1 CDS UM146_13030 NC_017632.1 2683365 2684222 D COG2116 Formate/nitrite family of transporters; formate transporter 2683365..2684222 Escherichia coli UM146 12701099 YP_006111486.1 CDS UM146_13035 NC_017632.1 2684277 2686559 D COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 2684277..2686559 Escherichia coli UM146 12701100 YP_006111487.1 CDS pflA NC_017632.1 2686751 2687491 D COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 2686751..2687491 Escherichia coli UM146 12701101 YP_006111488.1 CDS UM146_13045 NC_017632.1 2687588 2688736 R COG0477 Permeases of the major facilitator superfamily; putative MFS family transporter protein complement(2687588..2688736) Escherichia coli UM146 12701102 YP_006111489.1 CDS UM146_13050 NC_017632.1 2689050 2689676 D COG1335 Amidases related to nicotinamidase; hypothetical protein 2689050..2689676 Escherichia coli UM146 12701103 YP_006111490.1 CDS UM146_13055 NC_017632.1 2689712 2690575 R COG3302 DMSO reductase anchor subunit; dimethyl sulfoxide reductase, anaerobic subunit C complement(2689712..2690575) Escherichia coli UM146 12701104 YP_006111491.1 CDS UM146_13060 NC_017632.1 2690577 2691194 R COG0437 Fe-S-cluster-containing hydrogenase components 1; Anaerobic dimethyl sulfoxide reductase chain B complement(2690577..2691194) Escherichia coli UM146 12701105 YP_006111492.1 CDS UM146_13065 NC_017632.1 2691205 2693649 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; dimethyl sulfoxide reductase, anaerobic subunit A complement(2691205..2693649) Escherichia coli UM146 12701106 YP_006111493.1 CDS UM146_13070 NC_017632.1 2693888 2695180 R COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase complement(2693888..2695180) Escherichia coli UM146 12701107 YP_006111494.1 CDS UM146_13075 NC_017632.1 2695271 2696614 R COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA complement(2695271..2696614) Escherichia coli UM146 12701108 YP_006111495.1 CDS lolA NC_017632.1 2696625 2697236 R COG2834 Outer membrane lipoprotein-sorting protein; outer-membrane lipoprotein carrier protein complement(2696625..2697236) Escherichia coli UM146 12701109 YP_006111496.1 CDS UM146_13085 NC_017632.1 2697395 2701438 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; DNA translocase FtsK complement(2697395..2701438) Escherichia coli UM146 12701110 YP_006111497.1 CDS UM146_13090 NC_017632.1 2701573 2702067 R COG1522 Transcriptional regulators; leucine-responsive transcriptional regulator complement(2701573..2702067) Escherichia coli UM146 12701111 YP_006111498.1 CDS UM146_13095 NC_017632.1 2702610 2703575 D COG0492 Thioredoxin reductase; thioredoxin reductase 2702610..2703575 Escherichia coli UM146 12701112 YP_006111499.1 CDS UM146_13100 NC_017632.1 2703697 2705463 D COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components; cysteine/glutathione ABC transporter membrane/ATP-binding protein 2703697..2705463 Escherichia coli UM146 12701113 YP_006111500.1 CDS UM146_13105 NC_017632.1 2705464 2707185 D COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components; cysteine/glutathione ABC transporter membrane/ATP-binding protein 2705464..2707185 Escherichia coli UM146 12701114 YP_006111501.1 CDS aat NC_017632.1 2707227 2707931 D COG2360 Leu/Phe-tRNA-protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 2707227..2707931 Escherichia coli UM146 12701115 YP_006111502.1 CDS infA NC_017632.1 2708216 2708434 D COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 2708216..2708434 Escherichia coli UM146 12701116 YP_006111503.1 CDS UM146_13120 NC_017632.1 2709475 2710029 R hypothetical protein complement(2709475..2710029) Escherichia coli UM146 12701118 YP_006111504.1 CDS UM146_13125 NC_017632.1 2710040 2711041 R hypothetical protein complement(2710040..2711041) Escherichia coli UM146 12701119 YP_006111505.1 CDS UM146_13140 NC_017632.1 2711972 2713279 R CRISPR-associated protein, Csy1 family complement(2711972..2713279) Escherichia coli UM146 12701120 YP_006111506.1 CDS UM146_13145 NC_017632.1 2713609 2716842 R COG1203 Predicted helicases; CRISPR-associated helicase Cas3 family protein complement(2713609..2716842) Escherichia coli UM146 12701121 YP_006111507.1 CDS UM146_13150 NC_017632.1 2716839 2717822 R COG1518 Uncharacterized protein predicted to be involved in DNA repair; CRISPR-associated protein Cas1 complement(2716839..2717822) Escherichia coli UM146 12701122 YP_006111508.1 CDS clpA NC_017632.1 2718715 2720991 R COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent Clp protease ATP-binding subunit complement(2718715..2720991) Escherichia coli UM146 12701123 YP_006111509.1 CDS clpS NC_017632.1 2721022 2721342 R COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adaptor protein ClpS complement(2721022..2721342) Escherichia coli UM146 12701124 YP_006111510.1 CDS UM146_13165 NC_017632.1 2721625 2721885 D COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; hypothetical protein 2721625..2721885 Escherichia coli UM146 12701125 YP_006111511.1 CDS UM146_13170 NC_017632.1 2721786 2722292 D hypothetical protein 2721786..2722292 Escherichia coli UM146 12701126 YP_006111512.1 CDS UM146_13175 NC_017632.1 2722573 2723085 R Phage DNA packaging protein NU1-like protein complement(2722573..2723085) Escherichia coli UM146 12701127 YP_006111513.1 CDS UM146_13180 NC_017632.1 2723322 2723735 R hypothetical protein complement(2723322..2723735) Escherichia coli UM146 12701128 YP_006111514.1 CDS UM146_13185 NC_017632.1 2723748 2724083 R Capsid protein small subunit complement(2723748..2724083) Escherichia coli UM146 12701129 YP_006111515.1 CDS UM146_13190 NC_017632.1 2724095 2725150 R major capsid protein complement(2724095..2725150) Escherichia coli UM146 12701130 YP_006111516.1 CDS UM146_13195 NC_017632.1 2725150 2725356 R hypothetical protein complement(2725150..2725356) Escherichia coli UM146 12701131 YP_006111517.1 CDS UM146_13200 NC_017632.1 2725772 2726194 R COG0629 Single-stranded DNA-binding protein; Putative single stranded DNA-binding protein of prophage complement(2725772..2726194) Escherichia coli UM146 12701132 YP_006111518.1 CDS UM146_13205 NC_017632.1 2726191 2726448 R hypothetical protein complement(2726191..2726448) Escherichia coli UM146 12701133 YP_006111519.1 CDS UM146_13210 NC_017632.1 2726737 2728344 R COG3378 Predicted ATPase; nucleic acid independent nucleoside triphosphatase; phage DNA primase complement(2726737..2728344) Escherichia coli UM146 12701134 YP_006111520.1 CDS UM146_13215 NC_017632.1 2728481 2728780 R hypothetical protein complement(2728481..2728780) Escherichia coli UM146 12701135 YP_006111521.1 CDS UM146_13220 NC_017632.1 2728786 2729013 R hypothetical protein complement(2728786..2729013) Escherichia coli UM146 12701136 YP_006111522.1 CDS UM146_13225 NC_017632.1 2729006 2729347 R hypothetical protein complement(2729006..2729347) Escherichia coli UM146 12701137 YP_006111523.1 CDS UM146_13230 NC_017632.1 2729408 2729587 D hypothetical protein 2729408..2729587 Escherichia coli UM146 12701138 YP_006111524.1 CDS UM146_13235 NC_017632.1 2729933 2730142 R COG3311 Predicted transcriptional regulator; putative DNA binding protein complement(2729933..2730142) Escherichia coli UM146 12701139 YP_006111525.1 CDS UM146_13240 NC_017632.1 2730562 2731800 R COG0582 Integrase; putative integrase complement(2730562..2731800) Escherichia coli UM146 12701140 YP_006111526.1 CDS UM146_13245 NC_017632.1 2732205 2732429 D COG1278 Cold shock proteins; stationary phase/starvation inducible regulatory protein CspD 2732205..2732429 Escherichia coli UM146 12701141 YP_006111527.1 CDS UM146_13250 NC_017632.1 2732502 2734448 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; macrolide transporter ATP-binding /permease complement(2732502..2734448) Escherichia coli UM146 12701142 YP_006111528.1 CDS UM146_13255 NC_017632.1 2734445 2735560 R COG0845 Membrane-fusion protein; macrolide transporter subunit MacA complement(2734445..2735560) Escherichia coli UM146 12701143 YP_006111529.1 CDS UM146_13260 NC_017632.1 2735675 2736667 D COG2990 Uncharacterized protein conserved in bacteria; hypothetical protein 2735675..2736667 Escherichia coli UM146 12701144 YP_006111530.1 CDS UM146_13265 NC_017632.1 2736664 2738322 R COG3593 Predicted ATP-dependent endonuclease of the OLD family; hypothetical protein complement(2736664..2738322) Escherichia coli UM146 12701145 YP_006111531.1 CDS UM146_13270 NC_017632.1 2738380 2738535 D hypothetical protein 2738380..2738535 Escherichia coli UM146 12701146 YP_006111532.1 CDS UM146_13275 NC_017632.1 2738748 2739443 D COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); aquaporin Z 2738748..2739443 Escherichia coli UM146 12701147 YP_006111533.1 CDS UM146_13280 NC_017632.1 2739764 2740663 D COG2431 Predicted membrane protein; hypothetical protein 2739764..2740663 Escherichia coli UM146 12701148 YP_006111534.1 CDS UM146_13285 NC_017632.1 2740807 2742459 D COG1151 6Fe-6S prismane cluster-containing protein; hydroxylamine reductase 2740807..2742459 Escherichia coli UM146 12701149 YP_006111535.1 CDS UM146_13290 NC_017632.1 2742471 2743439 D COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; HCP oxidoreductase 2742471..2743439 Escherichia coli UM146 12701150 YP_006111536.1 CDS UM146_13295 NC_017632.1 2743572 2745290 D COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; pyruvate dehydrogenase 2743572..2745290 Escherichia coli UM146 12701151 YP_006111537.1 CDS UM146_13300 NC_017632.1 2745327 2746328 D COG2008 Threonine aldolase; L-threonine aldolase 2745327..2746328 Escherichia coli UM146 12701152 YP_006111538.1 CDS UM146_13305 NC_017632.1 2746339 2747769 D COG0702 Predicted nucleoside-diphosphate-sugar epimerases; hypothetical protein 2746339..2747769 Escherichia coli UM146 12701153 YP_006111539.1 CDS UM146_13310 NC_017632.1 2747832 2748881 D COG0451 Nucleoside-diphosphate-sugar epimerases; putative nucleotide di-P-sugar epimerase or dehydratase 2747832..2748881 Escherichia coli UM146 12701154 YP_006111540.1 CDS UM146_13315 NC_017632.1 2748878 2749708 R COG3023 Negative regulator of beta-lactamase expression; N-acetylmuramoyl-L-alanine amidase AmiD complement(2748878..2749708) Escherichia coli UM146 12701155 YP_006111541.1 CDS UM146_13320 NC_017632.1 2749705 2750028 R COG0393 Uncharacterized conserved protein; hypothetical protein complement(2749705..2750028) Escherichia coli UM146 12701156 YP_006111542.1 CDS UM146_13325 NC_017632.1 2750154 2750669 D COG0174 Glutamine synthetase; putative lipoprotein 2750154..2750669 Escherichia coli UM146 12701157 YP_006111543.1 CDS artP NC_017632.1 2750887 2751615 D COG4161 ABC-type arginine transport system, ATPase component; arginine transporter ATP-binding subunit 2750887..2751615 Escherichia coli UM146 12701158 YP_006111544.1 CDS UM146_13335 NC_017632.1 2751791 2752363 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; arginine transporter subunit ; periplasmic-binding component of ABC superfamily protein 2751791..2752363 Escherichia coli UM146 12701159 YP_006111545.1 CDS UM146_13340 NC_017632.1 2752370 2753086 D COG4215 ABC-type arginine transport system, permease component; arginine transporter permease subunit ArtQ 2752370..2753086 Escherichia coli UM146 12701160 YP_006111546.1 CDS artM NC_017632.1 2753086 2753754 D COG4160 ABC-type arginine/histidine transport system, permease component; arginine transporter permease subunit ArtM 2753086..2753754 Escherichia coli UM146 12701161 YP_006111547.1 CDS UM146_13350 NC_017632.1 2753980 2754711 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; arginine/ornithine ABC transporter substrate-binding protein 2753980..2754711 Escherichia coli UM146 12701162 YP_006111548.1 CDS rumB NC_017632.1 2754740 2755867 R COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; 23S rRNA methyluridine methyltransferase complement(2754740..2755867) Escherichia coli UM146 12701163 YP_006111549.1 CDS UM146_13360 NC_017632.1 2755908 2756396 R putative inner membrane protein complement(2755908..2756396) Escherichia coli UM146 12701164 YP_006111550.1 CDS UM146_13365 NC_017632.1 2756456 2757301 R COG1177 ABC-type spermidine/putrescine transport system, permease component II; putrescine ABC transporter membrane protein complement(2756456..2757301) Escherichia coli UM146 12701165 YP_006111551.1 CDS UM146_13370 NC_017632.1 2757298 2758251 R COG1176 ABC-type spermidine/putrescine transport system, permease component I; putrescine ABC transporter membrane protein complement(2757298..2758251) Escherichia coli UM146 12701166 YP_006111552.1 CDS potG NC_017632.1 2758261 2759394 R COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; putrescine ABC transporter ATP-binding protein complement(2758261..2759394) Escherichia coli UM146 12701167 YP_006111553.1 CDS UM146_13380 NC_017632.1 2759489 2760601 R COG0687 Spermidine/putrescine-binding periplasmic protein; putrescine ABC transporter periplasmic-binding protein complement(2759489..2760601) Escherichia coli UM146 12701168 YP_006111554.1 CDS UM146_13385 NC_017632.1 2760951 2761427 R putative sensory transduction regulator complement(2760951..2761427) Escherichia coli UM146 12701169 YP_006111555.1 CDS UM146_13390 NC_017632.1 2761515 2762417 R COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); ribosomal protein S6 modification protein complement(2761515..2762417) Escherichia coli UM146 12701170 YP_006111556.1 CDS UM146_13395 NC_017632.1 2762478 2763200 R COG0778 Nitroreductase; nitroreductase A complement(2762478..2763200) Escherichia coli UM146 12701171 YP_006111557.1 CDS UM146_13400 NC_017632.1 2763184 2763471 R hypothetical protein complement(2763184..2763471) Escherichia coli UM146 12701172 YP_006111558.1 CDS grxA NC_017632.1 2763631 2763888 D COG0695 Glutaredoxin and related proteins; glutaredoxin 2763631..2763888 Escherichia coli UM146 12701173 YP_006111559.1 CDS UM146_13410 NC_017632.1 2763918 2764295 R hypothetical protein complement(2763918..2764295) Escherichia coli UM146 12701174 YP_006111560.1 CDS UM146_13415 NC_017632.1 2764565 2766250 D COG2985 Predicted permease; hypothetical protein 2764565..2766250 Escherichia coli UM146 12701175 YP_006111561.1 CDS UM146_13420 NC_017632.1 2766425 2766961 R COG3226 Uncharacterized protein conserved in bacteria; putative DNA-binding transcriptional regulator complement(2766425..2766961) Escherichia coli UM146 12701176 YP_006111562.1 CDS UM146_13425 NC_017632.1 2767045 2768253 D COG0477 Permeases of the major facilitator superfamily; putative transporter 2767045..2768253 Escherichia coli UM146 12701177 YP_006111563.1 CDS UM146_13430 NC_017632.1 2768253 2769068 D COG0561 Predicted hydrolases of the HAD superfamily; putative phosphatase 2768253..2769068 Escherichia coli UM146 12701178 YP_006111564.1 CDS UM146_13435 NC_017632.1 2769153 2769419 D hypothetical protein 2769153..2769419 Escherichia coli UM146 12701179 YP_006111565.1 CDS UM146_13440 NC_017632.1 2769460 2770692 R COG0477 Permeases of the major facilitator superfamily; Multidrug translocase MdfA complement(2769460..2770692) Escherichia coli UM146 12701180 YP_006111566.1 CDS UM146_13445 NC_017632.1 2770977 2771573 D COG0671 Membrane-associated phospholipid phosphatase; undecaprenyl pyrophosphate phosphatase 2770977..2771573 Escherichia coli UM146 12701181 YP_006111567.1 CDS UM146_13450 NC_017632.1 2771631 2772389 D COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional repressor DeoR 2771631..2772389 Escherichia coli UM146 12701182 YP_006111568.1 CDS UM146_13455 NC_017632.1 2772436 2773638 R COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase complement(2772436..2773638) Escherichia coli UM146 12701183 YP_006111569.1 CDS UM146_13460 NC_017632.1 2773885 2774511 D COG0625 Glutathione S-transferase; glutathione S-transferase family protein 2773885..2774511 Escherichia coli UM146 12701184 YP_006111570.1 CDS UM146_13465 NC_017632.1 2774508 2775623 R COG2133 Glucose/sorbosone dehydrogenases; PQQ-dependent aldose sugar dehydrogenase precursor (asd) complement(2774508..2775623) Escherichia coli UM146 12701185 YP_006111571.1 CDS bssR NC_017632.1 2775734 2776117 R biofilm formation regulatory protein BssR complement(2775734..2776117) Escherichia coli UM146 12701186 YP_006111572.1 CDS UM146_13475 NC_017632.1 2776330 2777655 D COG0621 2-methylthioadenine synthetase; 30S ribosomal protein S12 methylthiotransferase 2776330..2777655 Escherichia coli UM146 12701187 YP_006111573.1 CDS UM146_13480 NC_017632.1 2777702 2779030 R COG2199 FOG: GGDEF domain; putative diguanylate cyclase complement(2777702..2779030) Escherichia coli UM146 12701188 YP_006111574.1 CDS UM146_13485 NC_017632.1 2779038 2781386 R COG2200 FOG: EAL domain; hypothetical protein complement(2779038..2781386) Escherichia coli UM146 12701189 YP_006111575.1 CDS UM146_13490 NC_017632.1 2781563 2782474 R COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; putative peptide transporter permease subunit: membrane component of ABC superfamily protein complement(2781563..2782474) Escherichia coli UM146 12701190 YP_006111576.1 CDS UM146_13495 NC_017632.1 2782477 2783397 R COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Glutathione transport system permease protein gsiC complement(2782477..2783397) Escherichia coli UM146 12701191 YP_006111577.1 CDS UM146_13500 NC_017632.1 2783415 2784953 R COG0747 ABC-type dipeptide transport system, periplasmic component; putative peptide transporter subunit: periplasmic-binding component of ABC superfamily protein complement(2783415..2784953) Escherichia coli UM146 12701192 YP_006111578.1 CDS UM146_13505 NC_017632.1 2784973 2786844 R COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; glutathione transporter ATP-binding protein complement(2784973..2786844) Escherichia coli UM146 12701193 YP_006111579.1 CDS UM146_13510 NC_017632.1 2786831 2787796 R COG1446 Asparaginase; L-asparaginase complement(2786831..2787796) Escherichia coli UM146 12701194 YP_006111580.1 CDS UM146_13515 NC_017632.1 2788000 2789235 D COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein MoeA 2788000..2789235 Escherichia coli UM146 12701195 YP_006111581.1 CDS UM146_13520 NC_017632.1 2789235 2789984 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; molybdopterin biosynthesis protein MoeB 2789235..2789984 Escherichia coli UM146 12701196 YP_006111582.1 CDS UM146_13525 NC_017632.1 2790060 2790722 R COG0176 Transaldolase; fructose-6-phosphate aldolase complement(2790060..2790722) Escherichia coli UM146 12701197 YP_006111583.1 CDS UM146_13530 NC_017632.1 2790853 2791752 D COG1180 Pyruvate-formate lyase-activating enzyme; putative AdoMet-dependent glycyl radical activating enzyme 2790853..2791752 Escherichia coli UM146 12701198 YP_006111584.1 CDS UM146_13535 NC_017632.1 2791758 2794190 D COG1882 Pyruvate-formate lyase; putative glycyl radical cofactor protein 2791758..2794190 Escherichia coli UM146 12701199 YP_006111585.1 CDS UM146_13540 NC_017632.1 2794336 2795151 D COG0561 Predicted hydrolases of the HAD superfamily; type II HAD phosphatase 2794336..2795151 Escherichia coli UM146 12701200 YP_006111586.1 CDS UM146_13545 NC_017632.1 2795351 2796943 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; putative ABC transporter with two ATP-binding domains complement(2795351..2796943) Escherichia coli UM146 12701201 YP_006111587.1 CDS UM146_13550 NC_017632.1 2797162 2798082 D COG1376 Uncharacterized protein conserved in bacteria; hypothetical protein 2797162..2798082 Escherichia coli UM146 12701202 YP_006111588.1 CDS UM146_13555 NC_017632.1 2798140 2799258 R COG0471 Di- and tricarboxylate transporters; hypothetical protein complement(2798140..2799258) Escherichia coli UM146 12701203 YP_006111589.1 CDS UM146_13560 NC_017632.1 2799255 2799722 R COG1321 Mn-dependent transcriptional regulator; manganese transport regulator MntR complement(2799255..2799722) Escherichia coli UM146 12701204 YP_006111590.1 CDS UM146_13565 NC_017632.1 2799908 2800036 D hypothetical protein 2799908..2800036 Escherichia coli UM146 12701205 YP_006111591.1 CDS UM146_13570 NC_017632.1 2800308 2801891 D COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein 2800308..2801891 Escherichia coli UM146 12701206 YP_006111592.1 CDS ompX NC_017632.1 2801941 2802456 R COG3637 Opacity protein and related surface antigens; outer membrane protein X complement(2801941..2802456) Escherichia coli UM146 12701207 YP_006111593.1 CDS UM146_13580 NC_017632.1 2802809 2803696 D COG5006 Predicted permease, DMT superfamily; threonine and homoserine efflux system 2802809..2803696 Escherichia coli UM146 12701208 YP_006111594.1 CDS UM146_13585 NC_017632.1 2803995 2804498 D COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); DNA starvation/stationary phase protection protein Dps 2803995..2804498 Escherichia coli UM146 12701209 YP_006111595.1 CDS glnH NC_017632.1 2804902 2805648 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine ABC transporter periplasmic protein 2804902..2805648 Escherichia coli UM146 12701210 YP_006111596.1 CDS glnP NC_017632.1 2805787 2806446 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter permease 2805787..2806446 Escherichia coli UM146 12701211 YP_006111597.1 CDS glnQ NC_017632.1 2806443 2807165 D COG1126 ABC-type polar amino acid transport system, ATPase component; glutamine ABC transporter ATP-binding protein 2806443..2807165 Escherichia coli UM146 12701212 YP_006111598.1 CDS UM146_13605 NC_017632.1 2807282 2809507 D COG0668 Small-conductance mechanosensitive channel; hypothetical protein 2807282..2809507 Escherichia coli UM146 12701213 YP_006111599.1 CDS UM146_13610 NC_017632.1 2809504 2810430 R COG3129 Predicted SAM-dependent methyltransferase; putative SAM-dependent methyltransferase complement(2809504..2810430) Escherichia coli UM146 12701214 YP_006111600.1 CDS UM146_13615 NC_017632.1 2810706 2810966 D hypothetical protein 2810706..2810966 Escherichia coli UM146 12701215 YP_006111601.1 CDS UM146_13620 NC_017632.1 2811231 2813513 D COG1629 Outer membrane receptor proteins, mostly Fe transport; catecholate siderophore receptor Fiu 2811231..2813513 Escherichia coli UM146 12701216 YP_006111602.1 CDS UM146_13625 NC_017632.1 2813729 2814406 D COG3128 Uncharacterized iron-regulated protein; putative hydroxylase 2813729..2814406 Escherichia coli UM146 12701217 YP_006111603.1 CDS UM146_13630 NC_017632.1 2814480 2814746 D COG1734 DnaK suppressor protein; hypothetical protein 2814480..2814746 Escherichia coli UM146 12701218 YP_006111604.1 CDS UM146_13635 NC_017632.1 2815010 2815270 D hypothetical protein 2815010..2815270 Escherichia coli UM146 12701219 YP_006111605.1 CDS UM146_13640 NC_017632.1 2815498 2816583 R COG2055 Malate/L-lactate dehydrogenases; hypothetical protein complement(2815498..2816583) Escherichia coli UM146 12701220 YP_006111606.1 CDS UM146_13645 NC_017632.1 2816723 2817685 R COG0547 Anthranilate phosphoribosyltransferase; glycosyl transferase family protein complement(2816723..2817685) Escherichia coli UM146 12701221 YP_006111607.1 CDS dinG NC_017632.1 2817713 2819863 R COG1199 Rad3-related DNA helicases; ATP-dependent DNA helicase DinG complement(2817713..2819863) Escherichia coli UM146 12701222 YP_006111608.1 CDS UM146_13655 NC_017632.1 2819862 2820167 D COG3236 Uncharacterized protein conserved in bacteria; hypothetical protein 2819862..2820167 Escherichia coli UM146 12701223 YP_006111609.1 CDS UM146_13660 NC_017632.1 2820400 2821761 R COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase RhlE complement(2820400..2821761) Escherichia coli UM146 12701224 YP_006111610.1 CDS UM146_13665 NC_017632.1 2821990 2822661 D COG1309 Transcriptional regulator; putative DNA-binding transcriptional regulator 2821990..2822661 Escherichia coli UM146 12701225 YP_006111611.1 CDS UM146_13670 NC_017632.1 2822664 2823659 D COG0845 Membrane-fusion protein; hypothetical protein 2822664..2823659 Escherichia coli UM146 12701226 YP_006111612.1 CDS UM146_13675 NC_017632.1 2823652 2825388 D COG1131 ABC-type multidrug transport system, ATPase component; putative ABC-type transport protein YbhF 2823652..2825388 Escherichia coli UM146 12701227 YP_006111613.1 CDS UM146_13680 NC_017632.1 2825381 2826514 D COG0842 ABC-type multidrug transport system, permease component; putative transporter subunit: permease component of ABC superfamily protein 2825381..2826514 Escherichia coli UM146 12701228 YP_006111614.1 CDS UM146_13685 NC_017632.1 2826525 2827631 D COG0842 ABC-type multidrug transport system, permease component; hypothetical protein 2826525..2827631 Escherichia coli UM146 12701229 YP_006111615.1 CDS UM146_13690 NC_017632.1 2827593 2828003 R COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; hypothetical protein complement(2827593..2828003) Escherichia coli UM146 12701230 YP_006111616.1 CDS UM146_13695 NC_017632.1 2828136 2828897 D COG3568 Metal-dependent hydrolase; hypothetical protein 2828136..2828897 Escherichia coli UM146 12701231 YP_006111617.1 CDS UM146_13700 NC_017632.1 2828894 2830135 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; cardiolipin synthase 2 2828894..2830135 Escherichia coli UM146 12701232 YP_006111618.1 CDS UM146_13705 NC_017632.1 2830135 2831091 D COG0392 Predicted integral membrane protein; hypothetical protein 2830135..2831091 Escherichia coli UM146 12701233 YP_006111619.1 CDS UM146_13710 NC_017632.1 2831127 2831840 R COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein complement(2831127..2831840) Escherichia coli UM146 12701234 YP_006111620.1 CDS UM146_13715 NC_017632.1 2832045 2832749 R COG0670 Integral membrane protein, interacts with FtsH; putative inner membrane protein complement(2832045..2832749) Escherichia coli UM146 12701235 YP_006111621.1 CDS moaE NC_017632.1 2832886 2833338 R COG0314 Molybdopterin converting factor, large subunit; molybdopterin guanine dinucleotide biosynthesis protein MoaE complement(2832886..2833338) Escherichia coli UM146 12701236 YP_006111622.1 CDS moaD NC_017632.1 2833340 2833585 R COG1977 Molybdopterin converting factor, small subunit; molybdopterin synthase small subunit complement(2833340..2833585) Escherichia coli UM146 12701237 YP_006111623.1 CDS moaC NC_017632.1 2833578 2834063 R COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC complement(2833578..2834063) Escherichia coli UM146 12701238 YP_006111624.1 CDS UM146_13735 NC_017632.1 2834066 2834578 R COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MoaB complement(2834066..2834578) Escherichia coli UM146 12701239 YP_006111625.1 CDS moaA NC_017632.1 2834600 2835589 R COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A complement(2834600..2835589) Escherichia coli UM146 12701240 YP_006111626.1 CDS UM146_13745 NC_017632.1 2835639 2835743 D hypothetical protein 2835639..2835743 Escherichia coli UM146 12701241 YP_006111627.1 CDS UM146_13750 NC_017632.1 2835986 2836894 D COG0391 Uncharacterized conserved protein; putative transferase 2835986..2836894 Escherichia coli UM146 12701242 YP_006111628.1 CDS UM146_13755 NC_017632.1 2836932 2838953 R COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B complement(2836932..2838953) Escherichia coli UM146 12701243 YP_006111629.1 CDS bioD NC_017632.1 2839532 2840209 R COG0132 Dethiobiotin synthetase; dithiobiotin synthetase complement(2839532..2840209) Escherichia coli UM146 12701244 YP_006111630.1 CDS UM146_13765 NC_017632.1 2840202 2840957 R COG0500 SAM-dependent methyltransferases; biotin biosynthesis protein BioC complement(2840202..2840957) Escherichia coli UM146 12701245 YP_006111631.1 CDS UM146_13770 NC_017632.1 2840944 2842098 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase complement(2840944..2842098) Escherichia coli UM146 12701246 YP_006111632.1 CDS UM146_13775 NC_017632.1 2842095 2843135 R COG0502 Biotin synthase and related enzymes; biotin synthase complement(2842095..2843135) Escherichia coli UM146 12701247 YP_006111633.1 CDS UM146_13780 NC_017632.1 2843222 2844511 D COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2843222..2844511 Escherichia coli UM146 12701248 YP_006111634.1 CDS UM146_13785 NC_017632.1 2844570 2845046 D COG1881 Phospholipid-binding protein; putative kinase inhibitor protein 2844570..2845046 Escherichia coli UM146 12701249 YP_006111635.1 CDS UM146_13790 NC_017632.1 2845198 2846481 D COG4677 Pectin methylesterase; putative pectinesterase 2845198..2846481 Escherichia coli UM146 12701250 YP_006111636.1 CDS UM146_13795 NC_017632.1 2846622 2848883 R COG1048 Aconitase A; hypothetical protein complement(2846622..2848883) Escherichia coli UM146 12701251 YP_006111637.1 CDS UM146_13800 NC_017632.1 2849066 2850499 R COG0471 Di- and tricarboxylate transporters; putative anion transporter complement(2849066..2850499) Escherichia coli UM146 12701252 YP_006111638.1 CDS UM146_13805 NC_017632.1 2850575 2851606 R COG2828 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2850575..2851606) Escherichia coli UM146 12701253 YP_006111639.1 CDS UM146_13810 NC_017632.1 2851743 2851892 R hypothetical protein complement(2851743..2851892) Escherichia coli UM146 12701254 YP_006111640.1 CDS UM146_13815 NC_017632.1 2851810 2852763 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 2851810..2852763 Escherichia coli UM146 12701255 YP_006111641.1 CDS UM146_13820 NC_017632.1 2852804 2853799 R COG2706 3-carboxymuconate cyclase; 6-phosphogluconolactonase complement(2852804..2853799) Escherichia coli UM146 12701256 YP_006111642.1 CDS UM146_13825 NC_017632.1 2853954 2854772 D COG0561 Predicted hydrolases of the HAD superfamily; phosphotransferase 2853954..2854772 Escherichia coli UM146 12701257 YP_006111643.1 CDS modC NC_017632.1 2854773 2855831 R COG4148 ABC-type molybdate transport system, ATPase component; molybdate transporter ATP-binding protein complement(2854773..2855831) Escherichia coli UM146 12701258 YP_006111644.1 CDS modB NC_017632.1 2855834 2856523 R COG4149 ABC-type molybdate transport system, permease component; molybdate ABC transporter permease complement(2855834..2856523) Escherichia coli UM146 12701259 YP_006111645.1 CDS modA NC_017632.1 2856523 2857296 R COG0725 ABC-type molybdate transport system, periplasmic component; molybdate transporter periplasmic protein complement(2856523..2857296) Escherichia coli UM146 12701260 YP_006111646.1 CDS UM146_13845 NC_017632.1 2857463 2857612 R hypothetical protein complement(2857463..2857612) Escherichia coli UM146 12701261 YP_006111647.1 CDS UM146_13850 NC_017632.1 2857741 2858529 D COG2005 N-terminal domain of molybdenum-binding protein; DNA-binding transcriptional regulator ModE 2857741..2858529 Escherichia coli UM146 12701262 YP_006111648.1 CDS UM146_13855 NC_017632.1 2858597 2860069 D COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; putative molybdenum transport ATP-binding protein ModF 2858597..2860069 Escherichia coli UM146 12701263 YP_006111649.1 CDS UM146_13860 NC_017632.1 2860331 2861347 D COG1087 UDP-glucose 4-epimerase; UDP-galactose-4-epimerase 2860331..2861347 Escherichia coli UM146 12701264 YP_006111650.1 CDS UM146_13865 NC_017632.1 2861357 2862403 D COG1085 Galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase 2861357..2862403 Escherichia coli UM146 12701265 YP_006111651.1 CDS UM146_13870 NC_017632.1 2862407 2863555 D COG0153 Galactokinase; galactokinase 2862407..2863555 Escherichia coli UM146 12701266 YP_006111652.1 CDS galM NC_017632.1 2863549 2864589 D COG2017 Galactose mutarotase and related enzymes; aldose 1-epimerase 2863549..2864589 Escherichia coli UM146 12701267 YP_006111653.1 CDS gpmA NC_017632.1 2864792 2865544 D COG0588 Phosphoglycerate mutase 1; phosphoglyceromutase 2864792..2865544 Escherichia coli UM146 12701268 YP_006111654.1 CDS UM146_13885 NC_017632.1 2865711 2866763 R COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2865711..2866763) Escherichia coli UM146 12701269 YP_006111655.1 CDS UM146_13890 NC_017632.1 2867079 2867459 D hypothetical protein 2867079..2867459 Escherichia coli UM146 12701270 YP_006111656.1 CDS UM146_13895 NC_017632.1 2867573 2868514 D COG1230 Co/Zn/Cd efflux system component; zinc transporter ZitB 2867573..2868514 Escherichia coli UM146 12701271 YP_006111657.1 CDS UM146_13900 NC_017632.1 2868511 2869230 R COG3201 Nicotinamide mononucleotide transporter; nicotinamide mononucleotide transporter PnuC complement(2868511..2869230) Escherichia coli UM146 12701272 YP_006111658.1 CDS UM146_13905 NC_017632.1 2869268 2870311 R COG0379 Quinolinate synthase; quinolinate synthetase complement(2869268..2870311) Escherichia coli UM146 12701273 YP_006111659.1 CDS UM146_13910 NC_017632.1 2870955 2871089 R COG1729 Uncharacterized protein conserved in bacteria; tol-pal system protein YbgF complement(2870955..2871089) Escherichia coli UM146 12701276 YP_006111660.1 CDS UM146_13915 NC_017632.1 2871128 2871745 R COG1729 Uncharacterized protein conserved in bacteria; tol-pal system protein YbgF complement(2871128..2871745) Escherichia coli UM146 12701277 YP_006111661.1 CDS UM146_13920 NC_017632.1 2871755 2872276 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated outer membrane lipoprotein complement(2871755..2872276) Escherichia coli UM146 12701278 YP_006111662.1 CDS tolB NC_017632.1 2872311 2873603 R COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB complement(2872311..2873603) Escherichia coli UM146 12701279 YP_006111663.1 CDS tolA NC_017632.1 2873736 2874986 R COG3064 Membrane protein involved in colicin uptake; cell envelope integrity inner membrane protein TolA complement(2873736..2874986) Escherichia coli UM146 12701280 YP_006111664.1 CDS UM146_13935 NC_017632.1 2875051 2875479 R COG0848 Biopolymer transport protein; colicin uptake protein TolR complement(2875051..2875479) Escherichia coli UM146 12701281 YP_006111665.1 CDS UM146_13940 NC_017632.1 2875483 2876166 R COG0811 Biopolymer transport proteins; colicin uptake protein TolQ complement(2875483..2876166) Escherichia coli UM146 12701282 YP_006111666.1 CDS UM146_13945 NC_017632.1 2876172 2876576 R COG0824 Predicted thioesterase; acyl-CoA thioester hydrolase YbgC complement(2876172..2876576) Escherichia coli UM146 12701283 YP_006111667.1 CDS UM146_13950 NC_017632.1 2876726 2877019 R COG3790 Predicted membrane protein; hypothetical protein complement(2876726..2877019) Escherichia coli UM146 12701284 YP_006111668.1 CDS UM146_13955 NC_017632.1 2877019 2877132 R COG4890 Predicted outer membrane lipoprotein; cyd operon protein YbgT complement(2877019..2877132) Escherichia coli UM146 12701285 YP_006111669.1 CDS UM146_13960 NC_017632.1 2877147 2878286 R COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome d ubiquinol oxidase, subunit II complement(2877147..2878286) Escherichia coli UM146 12701286 YP_006111670.1 CDS UM146_13965 NC_017632.1 2878302 2879870 R COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome D ubiquinol oxidase subunit I complement(2878302..2879870) Escherichia coli UM146 12701287 YP_006111671.1 CDS UM146_13970 NC_017632.1 2880974 2881213 R hypothetical protein complement(2880974..2881213) Escherichia coli UM146 12701288 YP_006111672.1 CDS UM146_13975 NC_017632.1 2881200 2882315 R COG4676 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2881200..2882315) Escherichia coli UM146 12701289 YP_006111673.1 CDS UM146_13980 NC_017632.1 2882555 2883424 R COG0074 Succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha complement(2882555..2883424) Escherichia coli UM146 12701290 YP_006111674.1 CDS sucC NC_017632.1 2883424 2884590 R COG0045 Succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta complement(2883424..2884590) Escherichia coli UM146 12701291 YP_006111675.1 CDS UM146_13990 NC_017632.1 2884684 2885901 R COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide succinyltransferase complement(2884684..2885901) Escherichia coli UM146 12701292 YP_006111676.1 CDS sucA NC_017632.1 2885916 2888717 R COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes; 2-oxoglutarate dehydrogenase E1 component complement(2885916..2888717) Escherichia coli UM146 12701293 YP_006111677.1 CDS sdhB NC_017632.1 2889078 2889794 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; succinate dehydrogenase iron-sulfur subunit complement(2889078..2889794) Escherichia coli UM146 12701294 YP_006111678.1 CDS sdhA NC_017632.1 2889810 2891576 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; succinate dehydrogenase flavoprotein subunit complement(2889810..2891576) Escherichia coli UM146 12701295 YP_006111679.1 CDS sdhD NC_017632.1 2891576 2891923 R COG2142 Succinate dehydrogenase, hydrophobic anchor subunit; succinate dehydrogenase cytochrome b556 small membrane subunit complement(2891576..2891923) Escherichia coli UM146 12701296 YP_006111680.1 CDS sdhC NC_017632.1 2891917 2892321 R COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; succinate dehydrogenase cytochrome b556 large membrane subunit complement(2891917..2892321) Escherichia coli UM146 12701297 YP_006111681.1 CDS gltA NC_017632.1 2893015 2894298 D COG0372 Citrate synthase; type II citrate synthase 2893015..2894298 Escherichia coli UM146 12701298 YP_006111682.1 CDS UM146_14025 NC_017632.1 2894446 2894820 D hypothetical protein 2894446..2894820 Escherichia coli UM146 12701299 YP_006111683.1 CDS UM146_14030 NC_017632.1 2894972 2896018 D COG3180 Putative ammonia monooxygenase; hypothetical protein 2894972..2896018 Escherichia coli UM146 12701300 YP_006111684.1 CDS UM146_14035 NC_017632.1 2896015 2896806 R COG0266 Formamidopyrimidine-DNA glycosylase; endonuclease VIII complement(2896015..2896806) Escherichia coli UM146 12701301 YP_006111685.1 CDS UM146_14040 NC_017632.1 2896842 2897576 R COG1540 Uncharacterized proteins, homologs of lactam utilization protein B; LamB/YcsF family protein complement(2896842..2897576) Escherichia coli UM146 12701302 YP_006111686.1 CDS UM146_14045 NC_017632.1 2897566 2898498 R COG1984 Allophanate hydrolase subunit 2; putative carboxylase subunit complement(2897566..2898498) Escherichia coli UM146 12701303 YP_006111687.1 CDS UM146_14050 NC_017632.1 2898492 2899148 R COG2049 Allophanate hydrolase subunit 1; putative hydrolase subunit complement(2898492..2899148) Escherichia coli UM146 12701304 YP_006111688.1 CDS UM146_14055 NC_017632.1 2899171 2899914 R COG0327 Uncharacterized conserved protein; putative hydrolase-oxidase complement(2899171..2899914) Escherichia coli UM146 12701305 YP_006111689.1 CDS UM146_14060 NC_017632.1 2900185 2901666 D COG3104 Dipeptide/tripeptide permease; putative transporter 2900185..2901666 Escherichia coli UM146 12701306 YP_006111690.1 CDS UM146_14065 NC_017632.1 2901708 2903126 R COG0415 Deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photolyase complement(2901708..2903126) Escherichia coli UM146 12701307 YP_006111691.1 CDS UM146_14070 NC_017632.1 2903123 2903632 R COG3272 Uncharacterized conserved protein; hypothetical protein complement(2903123..2903632) Escherichia coli UM146 12701308 YP_006111692.1 CDS UM146_14075 NC_017632.1 2903733 2903939 R hypothetical protein complement(2903733..2903939) Escherichia coli UM146 12701309 YP_006111693.1 CDS UM146_14080 NC_017632.1 2904341 2906014 D COG2060 K+-transporting ATPase, A chain; potassium-transporting ATPase subunit A 2904341..2906014 Escherichia coli UM146 12701310 YP_006111694.1 CDS UM146_14085 NC_017632.1 2906037 2908085 D COG2216 High-affinity K+ transport system, ATPase chain B; potassium-transporting ATPase subunit B 2906037..2908085 Escherichia coli UM146 12701311 YP_006111695.1 CDS UM146_14090 NC_017632.1 2908094 2908666 D COG2156 K+-transporting ATPase, c chain; potassium-transporting ATPase subunit C 2908094..2908666 Escherichia coli UM146 12701312 YP_006111696.1 CDS UM146_14095 NC_017632.1 2908659 2911343 D COG2205 Osmosensitive K+ channel histidine kinase; sensor protein KdpD 2908659..2911343 Escherichia coli UM146 12701313 YP_006111697.1 CDS UM146_14100 NC_017632.1 2911340 2912017 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional activator KdpE 2911340..2912017 Escherichia coli UM146 12701314 YP_006111698.1 CDS UM146_14105 NC_017632.1 2912697 2914904 D COG1982 Arginine/lysine/ornithine decarboxylases; ornithine decarboxylase 2912697..2914904 Escherichia coli UM146 12701315 YP_006111699.1 CDS potE NC_017632.1 2914901 2916220 D COG0531 Amino acid transporters; putrescine transporter 2914901..2916220 Escherichia coli UM146 12701316 YP_006111700.1 CDS UM146_14115 NC_017632.1 2916276 2917916 R COG0033 Phosphoglucomutase; phosphoglucomutase complement(2916276..2917916) Escherichia coli UM146 12701317 YP_006111701.1 CDS UM146_14120 NC_017632.1 2917942 2918487 R COG3057 Negative regulator of replication initiationR; replication initiation regulator SeqA complement(2917942..2918487) Escherichia coli UM146 12701318 YP_006111702.1 CDS UM146_14125 NC_017632.1 2918672 2919436 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); hypothetical protein 2918672..2919436 Escherichia coli UM146 12701319 YP_006111703.1 CDS UM146_14130 NC_017632.1 2919507 2919869 D LexA regulated protein 2919507..2919869 Escherichia coli UM146 12701320 YP_006111704.1 CDS UM146_14135 NC_017632.1 2920009 2920539 D COG0716 Flavodoxins; flavodoxin FldA 2920009..2920539 Escherichia coli UM146 12701321 YP_006111705.1 CDS fur NC_017632.1 2920828 2921274 D COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulator 2920828..2921274 Escherichia coli UM146 12701322 YP_006111706.1 CDS UM146_14145 NC_017632.1 2921358 2921684 R putative lipoprotein complement(2921358..2921684) Escherichia coli UM146 12701323 YP_006111707.1 CDS UM146_14150 NC_017632.1 2921734 2923140 R putative outer membrane porin complement(2921734..2923140) Escherichia coli UM146 12701324 YP_006111708.1 CDS UM146_14155 NC_017632.1 2923589 2925253 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutaminyl-tRNA synthetase complement(2923589..2925253) Escherichia coli UM146 12701325 YP_006111709.1 CDS UM146_14160 NC_017632.1 2925473 2926234 R COG1349 Transcriptional regulators of sugar metabolism; putative transcriptional regulator, DeoR-family protein complement(2925473..2926234) Escherichia coli UM146 12701326 YP_006111710.1 CDS pdxA NC_017632.1 2926236 2927222 R COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase complement(2926236..2927222) Escherichia coli UM146 12701327 YP_006111711.1 CDS UM146_14170 NC_017632.1 2927215 2928450 R COG3395 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2927215..2928450) Escherichia coli UM146 12701328 YP_006111712.1 CDS UM146_14175 NC_017632.1 2928620 2929777 D COG1454 Alcohol dehydrogenase, class IV; putative alcohol dehydrogenase 2928620..2929777 Escherichia coli UM146 12701329 YP_006111713.1 CDS UM146_14180 NC_017632.1 2929781 2930668 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthetase 2929781..2930668 Escherichia coli UM146 12701330 YP_006111714.1 CDS UM146_14195 NC_017632.1 2931514 2932683 D COG4692 Predicted neuraminidase (sialidase); Putative Glycosyl hydrolase, BNR repeat protein 2931514..2932683 Escherichia coli UM146 12701331 YP_006111715.1 CDS UM146_14200 NC_017632.1 2932680 2933150 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 2932680..2933150 Escherichia coli UM146 12701332 YP_006111716.1 CDS UM146_14205 NC_017632.1 2933164 2934444 D COG0471 Di- and tricarboxylate transporters; hypothetical protein 2933164..2934444 Escherichia coli UM146 12701333 YP_006111717.1 CDS UM146_14210 NC_017632.1 2934533 2936479 R COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; N-acetyl glucosamine specific PTS system components IIABC complement(2934533..2936479) Escherichia coli UM146 12701334 YP_006111718.1 CDS nagB NC_017632.1 2936812 2937612 D COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; glucosamine-6-phosphate deaminase 2936812..2937612 Escherichia coli UM146 12701335 YP_006111719.1 CDS nagA NC_017632.1 2937672 2938820 D COG1820 N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 2937672..2938820 Escherichia coli UM146 12701336 YP_006111720.1 CDS UM146_14225 NC_017632.1 2938829 2940049 D COG1940 Transcriptional regulator/sugar kinase; N-acetylglucosamine repressor 2938829..2940049 Escherichia coli UM146 12701337 YP_006111721.1 CDS UM146_14230 NC_017632.1 2940097 2940849 D COG0647 Predicted sugar phosphatases of the HAD superfamily; UMP phosphatase 2940097..2940849 Escherichia coli UM146 12701338 YP_006111722.1 CDS asnB NC_017632.1 2941105 2942769 D COG0367 Asparagine synthase (glutamine-hydrolyzing); asparagine synthetase B 2941105..2942769 Escherichia coli UM146 12701339 YP_006111723.1 CDS ubiF NC_017632.1 2944011 2945186 R COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(2944011..2945186) Escherichia coli UM146 12701347 YP_006111724.1 CDS UM146_14245 NC_017632.1 2945332 2946756 D COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase 2945332..2946756 Escherichia coli UM146 12701348 YP_006111725.1 CDS UM146_14250 NC_017632.1 2946909 2947949 D COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase; PhoH family protein 2946909..2947949 Escherichia coli UM146 12701349 YP_006111726.1 CDS UM146_14255 NC_017632.1 2947946 2948413 D COG0319 Predicted metal-dependent hydrolase; putative metalloprotease 2947946..2948413 Escherichia coli UM146 12701350 YP_006111727.1 CDS UM146_14260 NC_017632.1 2948503 2949381 D COG4535 Putative Mg2+ and Co2+ transporter CorC; Magnesium and cobalt efflux protein corC 2948503..2949381 Escherichia coli UM146 12701351 YP_006111728.1 CDS lnt NC_017632.1 2949406 2950947 D COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 2949406..2950947 Escherichia coli UM146 12701352 YP_006111729.1 CDS UM146_14270 NC_017632.1 2951074 2952951 R COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid); hypothetical protein complement(2951074..2952951) Escherichia coli UM146 12701353 YP_006111730.1 CDS UM146_14275 NC_017632.1 2953405 2954313 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamate and aspartate transporter subunit 2953405..2954313 Escherichia coli UM146 12701354 YP_006111731.1 CDS UM146_14280 NC_017632.1 2954483 2955223 D COG0765 ABC-type amino acid transport system, permease component; glutamate and aspartate transporter subunit 2954483..2955223 Escherichia coli UM146 12701355 YP_006111732.1 CDS UM146_14285 NC_017632.1 2955223 2955897 D COG0765 ABC-type amino acid transport system, permease component; Glutamate/aspartate transport system permease protein gltK 2955223..2955897 Escherichia coli UM146 12701356 YP_006111733.1 CDS UM146_14290 NC_017632.1 2955897 2956622 D COG1126 ABC-type polar amino acid transport system, ATPase component; glutamate and aspartate transporter subunit ; ATP-binding component of ABC superfamily protein 2955897..2956622 Escherichia coli UM146 12701357 YP_006111734.1 CDS rihA NC_017632.1 2956740 2957675 D COG1957 Inosine-uridine nucleoside N-ribohydrolase; ribonucleoside hydrolase 1 2956740..2957675 Escherichia coli UM146 12701358 YP_006111735.1 CDS UM146_14300 NC_017632.1 2957720 2958202 R COG0542 ATPases with chaperone activity, ATP-binding subunit; hypothetical protein complement(2957720..2958202) Escherichia coli UM146 12701359 YP_006111736.1 CDS leuS NC_017632.1 2958437 2961019 D COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase 2958437..2961019 Escherichia coli UM146 12701360 YP_006111737.1 CDS UM146_14310 NC_017632.1 2961034 2961615 D COG2980 Rare lipoprotein B; LPS-assembly lipoprotein RlpB 2961034..2961615 Escherichia coli UM146 12701361 YP_006111738.1 CDS holA NC_017632.1 2961615 2962646 D COG1466 DNA polymerase III, delta subunit; DNA polymerase III subunit delta 2961615..2962646 Escherichia coli UM146 12701362 YP_006111739.1 CDS nadD NC_017632.1 2962648 2963289 D COG1057 Nicotinic acid mononucleotide adenylyltransferase; nicotinic acid mononucleotide adenylyltransferase 2962648..2963289 Escherichia coli UM146 12701363 YP_006111740.1 CDS UM146_14325 NC_017632.1 2963313 2963924 D COG0406 Fructose-2,6-bisphosphatase; alpha-ribazole-5'-phosphate phosphatase 2963313..2963924 Escherichia coli UM146 12701364 YP_006111741.1 CDS UM146_14330 NC_017632.1 2964184 2964501 D COG0799 Uncharacterized homolog of plant Iojap protein; hypothetical protein 2964184..2964501 Escherichia coli UM146 12701365 YP_006111742.1 CDS UM146_14335 NC_017632.1 2964505 2964972 D COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase 2964505..2964972 Escherichia coli UM146 12701366 YP_006111743.1 CDS UM146_14340 NC_017632.1 2965003 2966904 D COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 2965003..2966904 Escherichia coli UM146 12701367 YP_006111744.1 CDS UM146_14345 NC_017632.1 2966907 2968019 D COG0772 Bacterial cell division membrane protein; cell wall shape-determining protein 2966907..2968019 Escherichia coli UM146 12701368 YP_006111745.1 CDS UM146_14350 NC_017632.1 2968030 2969118 D COG0797 Lipoproteins; rare lipoprotein A 2968030..2969118 Escherichia coli UM146 12701369 YP_006111746.1 CDS UM146_14355 NC_017632.1 2969258 2970469 D COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 2969258..2970469 Escherichia coli UM146 12701370 YP_006111747.1 CDS UM146_14360 NC_017632.1 2970579 2970842 D COG2921 Uncharacterized conserved protein; hypothetical protein 2970579..2970842 Escherichia coli UM146 12701371 YP_006111748.1 CDS UM146_14365 NC_017632.1 2970943 2971584 D COG0321 Lipoate-protein ligase B; lipoate-protein ligase B 2970943..2971584 Escherichia coli UM146 12701372 YP_006111749.1 CDS UM146_14370 NC_017632.1 2971844 2972185 D hypothetical protein 2971844..2972185 Escherichia coli UM146 12701373 YP_006111750.1 CDS UM146_14375 NC_017632.1 2972404 2973369 D COG0320 Lipoate synthase; lipoyl synthase 2972404..2973369 Escherichia coli UM146 12701374 YP_006111751.1 CDS tatE NC_017632.1 2973469 2973672 R COG1826 Sec-independent protein secretion pathway components; twin arginine translocase protein E complement(2973469..2973672) Escherichia coli UM146 12701375 YP_006111752.1 CDS UM146_14385 NC_017632.1 2973801 2974589 R COG0388 Predicted amidohydrolase; putative amidase complement(2973801..2974589) Escherichia coli UM146 12701376 YP_006111753.1 CDS UM146_14390 NC_017632.1 2974685 2975068 D COG0239 Integral membrane protein possibly involved in chromosome condensation; camphor resistance protein CrcB 2974685..2975068 Escherichia coli UM146 12701377 YP_006111754.1 CDS cspE NC_017632.1 2975121 2975330 R COG1278 Cold shock proteins; cold shock protein CspE complement(2975121..2975330) Escherichia coli UM146 12701378 YP_006111755.1 CDS pagP NC_017632.1 2975505 2976065 R palmitoyl transferase complement(2975505..2976065) Escherichia coli UM146 12701379 YP_006111756.1 CDS dcuC NC_017632.1 2976652 2978037 D COG3069 C4-dicarboxylate transporter; C4-dicarboxylate transporter DcuC 2976652..2978037 Escherichia coli UM146 12701380 YP_006111757.1 CDS dpiA NC_017632.1 2978078 2978758 R COG4565 Response regulator of citrate/malate metabolism; two-component response regulator DpiA complement(2978078..2978758) Escherichia coli UM146 12701381 YP_006111758.1 CDS UM146_14415 NC_017632.1 2978727 2980385 R COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; sensory histidine kinase in two-component regulatory system with citB complement(2978727..2980385) Escherichia coli UM146 12701382 YP_006111759.1 CDS UM146_14420 NC_017632.1 2980852 2981823 D COG3053 Citrate lyase synthetase; citrate lyase synthase 2980852..2981823 Escherichia coli UM146 12701383 YP_006111760.1 CDS UM146_14425 NC_017632.1 2981838 2982134 D COG3052 Citrate lyase, gamma subunit; citrate lyase subunit gamma 2981838..2982134 Escherichia coli UM146 12701384 YP_006111761.1 CDS UM146_14430 NC_017632.1 2982131 2983039 D COG2301 Citrate lyase beta subunit; citrate lyase subunit beta 2982131..2983039 Escherichia coli UM146 12701385 YP_006111762.1 CDS UM146_14435 NC_017632.1 2983050 2984582 D COG3051 Citrate lyase, alpha subunit; citrate lyase subunit alpha 2983050..2984582 Escherichia coli UM146 12701386 YP_006111763.1 CDS citX NC_017632.1 2984586 2985137 D COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase); 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 2984586..2985137 Escherichia coli UM146 12701387 YP_006111764.1 CDS citG NC_017632.1 2985112 2985990 D COG1767 Triphosphoribosyl-dephospho-CoA synthetase; triphosphoribosyl-dephospho-CoA synthase 2985112..2985990 Escherichia coli UM146 12701388 YP_006111765.1 CDS UM146_14450 NC_017632.1 2986041 2987504 D COG0471 Di- and tricarboxylate transporters; citrate:succinate antiporter 2986041..2987504 Escherichia coli UM146 12701389 YP_006111766.1 CDS UM146_14455 NC_017632.1 2987618 2988424 D COG3719 Ribonuclease I; ribonuclease I 2987618..2988424 Escherichia coli UM146 12701390 YP_006111767.1 CDS UM146_14460 NC_017632.1 2988654 2989064 D COG0782 Transcription elongation factor; nucleoside diphosphate kinase regulator 2988654..2989064 Escherichia coli UM146 12701391 YP_006111768.1 CDS UM146_14465 NC_017632.1 2989420 2989848 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UP12 2989420..2989848 Escherichia coli UM146 12701392 YP_006111769.1 CDS UM146_14470 NC_017632.1 2989969 2991534 R COG3634 Alkyl hydroperoxide reductase, large subunit; alkyl hydroperoxide reductase subunit F complement(2989969..2991534) Escherichia coli UM146 12701393 YP_006111770.1 CDS UM146_14475 NC_017632.1 2991705 2992268 R COG0450 Peroxiredoxin; alkyl hydroperoxide reductase subunit C complement(2991705..2992268) Escherichia coli UM146 12701394 YP_006111771.1 CDS dsbG NC_017632.1 2992640 2993386 D COG1651 Protein-disulfide isomerase; disulfide isomerase/thiol-disulfide oxidase 2992640..2993386 Escherichia coli UM146 12701395 YP_006111772.1 CDS UM146_14485 NC_017632.1 2993591 2994493 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator, LysR-type 2993591..2994493 Escherichia coli UM146 12701396 YP_006111773.1 CDS UM146_14490 NC_017632.1 2994640 2995860 D COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase; immunoglobulin-binding regulator 2994640..2995860 Escherichia coli UM146 12701397 YP_006111774.1 CDS UM146_14495 NC_017632.1 2995845 2996462 D COG1475 Predicted transcriptional regulators; immunoglobulin-binding regulator 2995845..2996462 Escherichia coli UM146 12701398 YP_006111775.1 CDS UM146_14500 NC_017632.1 2996463 2997623 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; putative aminotransferase complement(2996463..2997623) Escherichia coli UM146 12701399 YP_006111776.1 CDS UM146_14505 NC_017632.1 2997743 2998831 D COG0371 Glycerol dehydrogenase and related enzymes; hypothetical protein 2997743..2998831 Escherichia coli UM146 12701400 YP_006111777.1 CDS UM146_14510 NC_017632.1 2998841 2999038 R COG2879 Uncharacterized small protein; hypothetical protein complement(2998841..2999038) Escherichia coli UM146 12701401 YP_006111778.1 CDS UM146_14515 NC_017632.1 2999151 3001256 R COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein complement(2999151..3001256) Escherichia coli UM146 12701402 YP_006111779.1 CDS UM146_14520 NC_017632.1 3001437 3001850 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein complement(3001437..3001850) Escherichia coli UM146 12701403 YP_006111780.1 CDS UM146_14525 NC_017632.1 3001853 3002599 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 2,3-dihydroxybenzoate-2,3-dehydrogenase complement(3001853..3002599) Escherichia coli UM146 12701404 YP_006111781.1 CDS UM146_14530 NC_017632.1 3002599 3003456 R COG1535 Isochorismate hydrolase; isochorismatase complement(3002599..3003456) Escherichia coli UM146 12701405 YP_006111782.1 CDS entE NC_017632.1 3003470 3005080 R COG1021 Peptide arylation enzymes; enterobactin synthase subunit E complement(3003470..3005080) Escherichia coli UM146 12701406 YP_006111783.1 CDS UM146_14540 NC_017632.1 3005090 3006265 R COG1169 Isochorismate synthase; isochorismate synthase complement(3005090..3006265) Escherichia coli UM146 12701407 YP_006111784.1 CDS UM146_14545 NC_017632.1 3006454 3007410 D COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component; iron-enterobactin transporter periplasmic binding protein 3006454..3007410 Escherichia coli UM146 12701408 YP_006111785.1 CDS UM146_14550 NC_017632.1 3007414 3008664 R COG0477 Permeases of the major facilitator superfamily; enterobactin exporter EntS complement(3007414..3008664) Escherichia coli UM146 12701409 YP_006111786.1 CDS UM146_14555 NC_017632.1 3008775 3009779 D COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron-enterobactin transporter membrane protein 3008775..3009779 Escherichia coli UM146 12701410 YP_006111787.1 CDS UM146_14560 NC_017632.1 3009776 3010768 D COG4779 ABC-type enterobactin transport system, permease component; iron-enterobactin transporter permease 3009776..3010768 Escherichia coli UM146 12701411 YP_006111788.1 CDS UM146_14565 NC_017632.1 3010765 3011580 D COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron-enterobactin transporter ATP-binding protein 3010765..3011580 Escherichia coli UM146 12701412 YP_006111789.1 CDS UM146_14570 NC_017632.1 3011577 3012710 R COG3765 Chain length determinant protein; ferric enterobactin transport protein FepE complement(3011577..3012710) Escherichia coli UM146 12701413 YP_006111790.1 CDS entF NC_017632.1 3012926 3016807 R COG1020 Non-ribosomal peptide synthetase modules and related proteins; enterobactin synthase subunit F complement(3012926..3016807) Escherichia coli UM146 12701414 YP_006111791.1 CDS UM146_14580 NC_017632.1 3016804 3017022 R COG3251 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3016804..3017022) Escherichia coli UM146 12701415 YP_006111792.1 CDS UM146_14585 NC_017632.1 3017025 3018227 R COG2382 Enterochelin esterase and related enzymes; enterobactin/ferric enterobactin esterase complement(3017025..3018227) Escherichia coli UM146 12701416 YP_006111793.1 CDS UM146_14590 NC_017632.1 3018470 3020710 D COG4771 Outer membrane receptor for ferrienterochelin and colicins; outer membrane receptor FepA 3018470..3020710 Escherichia coli UM146 12701417 YP_006111794.1 CDS UM146_14595 NC_017632.1 3020876 3021505 D COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex 3020876..3021505 Escherichia coli UM146 12701418 YP_006111795.1 CDS UM146_14600 NC_017632.1 3021627 3021779 R regulatory peptide MokC complement(3021627..3021779) Escherichia coli UM146 12701419 YP_006111796.1 CDS UM146_14605 NC_017632.1 3022045 3022158 R hypothetical protein complement(3022045..3022158) Escherichia coli UM146 12701420 YP_006111797.1 CDS UM146_14610 NC_017632.1 3022233 3023351 D COG2170 Uncharacterized conserved protein; carboxylate-amine ligase 3022233..3023351 Escherichia coli UM146 12701421 YP_006111798.1 CDS UM146_14615 NC_017632.1 3023417 3023665 D hypothetical protein 3023417..3023665 Escherichia coli UM146 12701422 YP_006111799.1 CDS UM146_14620 NC_017632.1 3023730 3024113 D COG2315 Uncharacterized protein conserved in bacteria; hypothetical protein 3023730..3024113 Escherichia coli UM146 12701423 YP_006111800.1 CDS UM146_14625 NC_017632.1 3024413 3024844 D COG0778 Nitroreductase; dihydropteridine reductase 3024413..3024844 Escherichia coli UM146 12701424 YP_006111801.1 CDS UM146_14630 NC_017632.1 3024952 3026199 D COG0668 Small-conductance mechanosensitive channel; hypothetical protein 3024952..3026199 Escherichia coli UM146 12701425 YP_006111802.1 CDS UM146_14635 NC_017632.1 3026281 3027657 R COG1113 Gamma-aminobutyrate permease and related permeases; phenylalanine transporter complement(3026281..3027657) Escherichia coli UM146 12701426 YP_006111803.1 CDS UM146_14640 NC_017632.1 3027759 3030902 R COG3696 Putative silver efflux pump; copper/silver efflux system, membrane component complement(3027759..3030902) Escherichia coli UM146 12701427 YP_006111804.1 CDS UM146_14645 NC_017632.1 3030914 3032137 R COG0845 Membrane-fusion protein; copper/silver efflux system membrane fusion protein CusB complement(3030914..3032137) Escherichia coli UM146 12701428 YP_006111805.1 CDS UM146_14650 NC_017632.1 3032153 3032485 R COG5569 Uncharacterized conserved protein; copper-binding protein complement(3032153..3032485) Escherichia coli UM146 12701429 YP_006111806.1 CDS UM146_14655 NC_017632.1 3032509 3033891 R COG1538 Outer membrane protein; copper/silver efflux system outer membrane protein CusC complement(3032509..3033891) Escherichia coli UM146 12701430 YP_006111807.1 CDS UM146_14660 NC_017632.1 3034048 3034731 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional activator CusR 3034048..3034731 Escherichia coli UM146 12701431 YP_006111808.1 CDS UM146_14665 NC_017632.1 3034721 3036163 D COG0642 Signal transduction histidine kinase; sensor kinase CusS 3034721..3036163 Escherichia coli UM146 12701432 YP_006111809.1 CDS nfrB NC_017632.1 3036313 3038550 D COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; bacteriophage N4 adsorption protein B 3036313..3038550 Escherichia coli UM146 12701433 YP_006111810.1 CDS UM146_14675 NC_017632.1 3038537 3041509 D COG0457 FOG: TPR repeat; bacteriophage N4 receptor, outer membrane subunit 3038537..3041509 Escherichia coli UM146 12701434 YP_006111811.1 CDS UM146_14680 NC_017632.1 3041510 3042400 D COG0516 IMP dehydrogenase/GMP reductase; hypothetical protein 3041510..3042400 Escherichia coli UM146 12701435 YP_006111812.1 CDS UM146_14685 NC_017632.1 3043059 3044012 D COG4571 Outer membrane protease; outer membrane protease 3043059..3044012 Escherichia coli UM146 12701436 YP_006111813.1 CDS UM146_14690 NC_017632.1 3044256 3044912 D COG0500 SAM-dependent methyltransferases; hypothetical protein 3044256..3044912 Escherichia coli UM146 12701437 YP_006111814.1 CDS UM146_14695 NC_017632.1 3044967 3045323 R Tail fiber assembly protein complement(3044967..3045323) Escherichia coli UM146 12701438 YP_006111815.1 CDS UM146_14700 NC_017632.1 3045330 3045629 D COG0582 Integrase; prophage DLP12 integrase 3045330..3045629 Escherichia coli UM146 12701439 YP_006111816.1 CDS UM146_14705 NC_017632.1 3045649 3045957 D COG0582 Integrase; prophage DLP12 integrase 3045649..3045957 Escherichia coli UM146 12701440 YP_006111817.1 CDS UM146_14710 NC_017632.1 3046311 3047177 D COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 3046311..3047177 Escherichia coli UM146 12701442 YP_006111818.1 CDS UM146_14715 NC_017632.1 3047179 3047391 D COG2501 Uncharacterized conserved protein; hypothetical protein 3047179..3047391 Escherichia coli UM146 12701443 YP_006111819.1 CDS UM146_14720 NC_017632.1 3047499 3048020 D COG1988 Predicted membrane-bound metal-dependent hydrolases; inner membrane protein ybcI 3047499..3048020 Escherichia coli UM146 12701444 YP_006111820.1 CDS cysS NC_017632.1 3048056 3049441 R COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase complement(3048056..3049441) Escherichia coli UM146 12701445 YP_006111821.1 CDS UM146_14730 NC_017632.1 3049615 3050109 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase B 3049615..3050109 Escherichia coli UM146 12701446 YP_006111822.1 CDS UM146_14735 NC_017632.1 3050112 3050834 D COG2908 Uncharacterized protein conserved in bacteria; UDP-2,3-diacylglucosamine hydrolase 3050112..3050834 Escherichia coli UM146 12701447 YP_006111823.1 CDS UM146_14740 NC_017632.1 3050945 3051274 D hypothetical protein 3050945..3051274 Escherichia coli UM146 12701448 YP_006111824.1 CDS UM146_14745 NC_017632.1 3051370 3051879 D COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; phosphoribosylaminoimidazole carboxylase catalytic subunit 3051370..3051879 Escherichia coli UM146 12701449 YP_006111825.1 CDS UM146_14750 NC_017632.1 3051876 3052943 D COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); phosphoribosylaminoimidazole carboxylase ATPase subunit 3051876..3052943 Escherichia coli UM146 12701450 YP_006111826.1 CDS UM146_14755 NC_017632.1 3053096 3053989 R COG0549 Carbamate kinase; carbamate kinase complement(3053096..3053989) Escherichia coli UM146 12701451 YP_006111827.1 CDS UM146_14760 NC_017632.1 3053986 3054801 R hypothetical protein complement(3053986..3054801) Escherichia coli UM146 12701452 YP_006111828.1 CDS UM146_14765 NC_017632.1 3054812 3056071 R hypothetical protein complement(3054812..3056071) Escherichia coli UM146 12701453 YP_006111829.1 CDS UM146_14770 NC_017632.1 3056081 3057748 R COG0074 Succinyl-CoA synthetase, alpha subunit; membrane protein FdrA complement(3056081..3057748) Escherichia coli UM146 12701454 YP_006111830.1 CDS UM146_14775 NC_017632.1 3058065 3059114 D COG2055 Malate/L-lactate dehydrogenases; ureidoglycolate dehydrogenase 3058065..3059114 Escherichia coli UM146 12701455 YP_006111831.1 CDS UM146_14780 NC_017632.1 3059136 3060371 D COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; allantoate amidohydrolase 3059136..3060371 Escherichia coli UM146 12701456 YP_006111832.1 CDS UM146_14785 NC_017632.1 3060382 3061167 D COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization; hypothetical protein 3060382..3061167 Escherichia coli UM146 12701457 YP_006111833.1 CDS UM146_14790 NC_017632.1 3061296 3062441 R COG1929 Glycerate kinase; glycerate kinase complement(3061296..3062441) Escherichia coli UM146 12701458 YP_006111834.1 CDS UM146_14795 NC_017632.1 3062463 3063764 R COG2233 Xanthine/uracil permeases; putative purine permease YbbY complement(3062463..3063764) Escherichia coli UM146 12701459 YP_006111835.1 CDS UM146_14800 NC_017632.1 3063820 3065181 R COG0044 Dihydroorotase and related cyclic amidohydrolases; allantoinase complement(3063820..3065181) Escherichia coli UM146 12701460 YP_006111836.1 CDS UM146_14805 NC_017632.1 3065241 3066695 R COG1953 Cytosine/uracil/thiamine/allantoin permeases; allantoin permease complement(3065241..3066695) Escherichia coli UM146 12701461 YP_006111837.1 CDS UM146_14810 NC_017632.1 3066865 3067743 R COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; tartronate semialdehyde reductase, NADH-dependent complement(3066865..3067743) Escherichia coli UM146 12701462 YP_006111838.1 CDS UM146_14815 NC_017632.1 3067843 3068619 R COG3622 Hydroxypyruvate isomerase; hydroxypyruvate isomerase complement(3067843..3068619) Escherichia coli UM146 12701463 YP_006111839.1 CDS UM146_14820 NC_017632.1 3068632 3070413 R COG3960 Glyoxylate carboligase; glyoxylate carboligase complement(3068632..3070413) Escherichia coli UM146 12701464 YP_006111840.1 CDS UM146_14825 NC_017632.1 3070503 3071318 R COG1414 Transcriptional regulator; DNA-binding transcriptional repressor AllR complement(3070503..3071318) Escherichia coli UM146 12701465 YP_006111841.1 CDS UM146_14830 NC_017632.1 3071396 3071878 R COG3194 Ureidoglycolate hydrolase; ureidoglycolate hydrolase complement(3071396..3071878) Escherichia coli UM146 12701466 YP_006111842.1 CDS UM146_14835 NC_017632.1 3072108 3073034 D COG0583 Transcriptional regulator; DNA-binding transcriptional activator AllS 3072108..3073034 Escherichia coli UM146 12701467 YP_006111843.1 CDS UM146_14840 NC_017632.1 3073103 3074335 D COG2603 Predicted ATPase; tRNA 2-selenouridine synthase 3073103..3074335 Escherichia coli UM146 12701468 YP_006111844.1 CDS UM146_14845 NC_017632.1 3074255 3076669 R COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component; putative ABC transporter permease complement(3074255..3076669) Escherichia coli UM146 12701469 YP_006111845.1 CDS UM146_14850 NC_017632.1 3076666 3077352 R COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; putative ABC transporter ATP-binding protein YbbA complement(3076666..3077352) Escherichia coli UM146 12701470 YP_006111846.1 CDS UM146_14855 NC_017632.1 3077320 3077946 D COG2755 Lysophospholipase L1 and related esterases; multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 3077320..3077946 Escherichia coli UM146 12701471 YP_006111847.1 CDS UM146_14860 NC_017632.1 3077936 3078745 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 3077936..3078745 Escherichia coli UM146 12701472 YP_006111848.1 CDS UM146_14865 NC_017632.1 3078806 3079660 D COG3118 Thioredoxin domain-containing protein; putative thioredoxin-like protein 3078806..3079660 Escherichia coli UM146 12701473 YP_006111849.1 CDS UM146_14870 NC_017632.1 3079723 3080502 R COG0390 ABC-type uncharacterized transport system, permease component; putative metal resistance protein complement(3079723..3080502) Escherichia coli UM146 12701474 YP_006111850.1 CDS UM146_14875 NC_017632.1 3080489 3081166 R COG4619 ABC-type uncharacterized transport system, ATPase component; putative ABC transporter ATP-binding protein YbbL complement(3080489..3081166) Escherichia coli UM146 12701475 YP_006111851.1 CDS UM146_14880 NC_017632.1 3081312 3082229 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; putative protease, membrane anchored 3081312..3082229 Escherichia coli UM146 12701476 YP_006111852.1 CDS UM146_14885 NC_017632.1 3082226 3082684 D COG1585 Membrane protein implicated in regulation of membrane protease activity; inner membrane protein YbbJ 3082226..3082684 Escherichia coli UM146 12701477 YP_006111853.1 CDS UM146_14890 NC_017632.1 3082787 3083149 R hypothetical protein complement(3082787..3083149) Escherichia coli UM146 12701478 YP_006111854.1 CDS UM146_14895 NC_017632.1 3083516 3084532 D COG5295 Autotransporter adhesin; hypothetical protein 3083516..3084532 Escherichia coli UM146 12701479 YP_006111855.1 CDS UM146_14900 NC_017632.1 3084618 3085040 D hypothetical protein 3084618..3085040 Escherichia coli UM146 12701480 YP_006111856.1 CDS UM146_14905 NC_017632.1 3085073 3085240 D hypothetical protein 3085073..3085240 Escherichia coli UM146 12701481 YP_006111857.1 CDS UM146_14910 NC_017632.1 3085244 3085651 R COG0789 Predicted transcriptional regulators; DNA-binding transcriptional regulator CueR complement(3085244..3085651) Escherichia coli UM146 12701482 YP_006111858.1 CDS UM146_14915 NC_017632.1 3085776 3087068 R COG0531 Amino acid transporters; putative nitrogen-containing metabolite transporter complement(3085776..3087068) Escherichia coli UM146 12701483 YP_006111859.1 CDS UM146_14920 NC_017632.1 3087071 3088003 R COG2066 Glutaminase; glutaminase complement(3087071..3088003) Escherichia coli UM146 12701484 YP_006111860.1 CDS copA NC_017632.1 3088265 3090769 D COG2217 Cation transport ATPase; copper exporting ATPase 3088265..3090769 Escherichia coli UM146 12701485 YP_006111861.1 CDS UM146_14930 NC_017632.1 3090827 3091168 R COG3093 Plasmid maintenance system antidote protein; XRE family plasmid maintenance system antidote protein complement(3090827..3091168) Escherichia coli UM146 12701486 YP_006111862.1 CDS UM146_14935 NC_017632.1 3091204 3091506 R COG3549 Plasmid maintenance system killer protein; putative RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system complement(3091204..3091506) Escherichia coli UM146 12701487 YP_006111863.1 CDS UM146_14940 NC_017632.1 3091639 3092433 D COG3735 Uncharacterized protein conserved in bacteria; hypothetical protein 3091639..3092433 Escherichia coli UM146 12701488 YP_006111864.1 CDS UM146_14945 NC_017632.1 3092750 3093115 D COG2606 Uncharacterized conserved protein; hypothetical protein 3092750..3093115 Escherichia coli UM146 12701489 YP_006111865.1 CDS UM146_14950 NC_017632.1 3093139 3093939 D hypothetical protein 3093139..3093939 Escherichia coli UM146 12701490 YP_006111866.1 CDS UM146_14955 NC_017632.1 3093936 3094439 D hypothetical protein 3093936..3094439 Escherichia coli UM146 12701491 YP_006111867.1 CDS ushA NC_017632.1 3094477 3096129 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic complement(3094477..3096129) Escherichia coli UM146 12701492 YP_006111868.1 CDS UM146_14965 NC_017632.1 3096347 3097567 D COG0477 Permeases of the major facilitator superfamily; fosmidomycin efflux system, member of the major facilitator superfamily protein 3096347..3097567 Escherichia coli UM146 12701493 YP_006111869.1 CDS UM146_14970 NC_017632.1 3097806 3099482 D COG4651 Kef-type K+ transport system, predicted NAD-binding component; putative cation:proton antiport protein 3097806..3099482 Escherichia coli UM146 12701494 YP_006111870.1 CDS UM146_14975 NC_017632.1 3099612 3100916 R COG0524 Sugar kinases, ribokinase family; inosine-guanosine kinase complement(3099612..3100916) Escherichia coli UM146 12701495 YP_006111871.1 CDS UM146_14980 NC_017632.1 3101068 3102027 D COG0657 Esterase/lipase; acetyl esterase 3101068..3102027 Escherichia coli UM146 12701496 YP_006111872.1 CDS hemH NC_017632.1 3102024 3102986 R COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase complement(3102024..3102986) Escherichia coli UM146 12701497 YP_006111873.1 CDS adk NC_017632.1 3103118 3103762 R COG0563 Adenylate kinase and related kinases; adenylate kinase complement(3103118..3103762) Escherichia coli UM146 12701498 YP_006111874.1 CDS UM146_14995 NC_017632.1 3103943 3105817 R COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 complement(3103943..3105817) Escherichia coli UM146 12701499 YP_006111875.1 CDS recR NC_017632.1 3105927 3106532 R COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR complement(3105927..3106532) Escherichia coli UM146 12701500 YP_006111876.1 CDS UM146_15005 NC_017632.1 3106532 3106861 R COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3106532..3106861) Escherichia coli UM146 12701501 YP_006111877.1 CDS UM146_15010 NC_017632.1 3106914 3108845 R COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau complement(3106914..3108845) Escherichia coli UM146 12701502 YP_006111878.1 CDS UM146_15015 NC_017632.1 3108974 3109525 R COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase complement(3108974..3109525) Escherichia coli UM146 12701503 YP_006111879.1 CDS UM146_15020 NC_017632.1 3109678 3110055 R COG2832 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3109678..3110055) Escherichia coli UM146 12701504 YP_006111880.1 CDS UM146_15025 NC_017632.1 3110125 3110652 D COG3923 Primosomal replication protein N''; primosomal replication protein N'' 3110125..3110652 Escherichia coli UM146 12701505 YP_006111881.1 CDS UM146_15030 NC_017632.1 3110666 3110827 D hypothetical protein 3110666..3110827 Escherichia coli UM146 12701506 YP_006111882.1 CDS UM146_15035 NC_017632.1 3111039 3114401 R COG3264 Small-conductance mechanosensitive channel; potassium efflux protein KefA complement(3111039..3114401) Escherichia coli UM146 12701507 YP_006111883.1 CDS UM146_15040 NC_017632.1 3114529 3115176 R COG1309 Transcriptional regulator; DNA-binding transcriptional repressor AcrR complement(3114529..3115176) Escherichia coli UM146 12701508 YP_006111884.1 CDS UM146_15045 NC_017632.1 3115318 3116511 D COG0845 Membrane-fusion protein; multidrug efflux system 3115318..3116511 Escherichia coli UM146 12701509 YP_006111885.1 CDS UM146_15050 NC_017632.1 3116534 3119683 D COG0841 Cation/multidrug efflux pump; multidrug efflux system protein AcrB 3116534..3119683 Escherichia coli UM146 12701510 YP_006111886.1 CDS UM146_15055 NC_017632.1 3120228 3120602 D hypothetical protein 3120228..3120602 Escherichia coli UM146 12701511 YP_006111887.1 CDS UM146_15060 NC_017632.1 3120628 3120846 D modulator of gene expression, with H-NS 3120628..3120846 Escherichia coli UM146 12701512 YP_006111888.1 CDS UM146_15065 NC_017632.1 3121020 3121571 D COG0110 Acetyltransferase (isoleucine patch superfamily); maltose O-acetyltransferase 3121020..3121571 Escherichia coli UM146 12701513 YP_006111889.1 CDS UM146_15070 NC_017632.1 3121687 3122157 D hypothetical protein 3121687..3122157 Escherichia coli UM146 12701514 YP_006111890.1 CDS UM146_15075 NC_017632.1 3122321 3123871 D COG4943 Predicted signal transduction protein containing sensor and EAL domains; hypothetical protein 3122321..3123871 Escherichia coli UM146 12701515 YP_006111891.1 CDS UM146_15080 NC_017632.1 3123913 3124266 R COG5507 Uncharacterized conserved protein; hypothetical protein complement(3123913..3124266) Escherichia coli UM146 12701516 YP_006111892.1 CDS UM146_15085 NC_017632.1 3124645 3124956 D COG3695 Predicted methylated DNA-protein cysteine methyltransferase; methylated-DNA-[protein]-cysteine S-methyltransferase 3124645..3124956 Escherichia coli UM146 12701517 YP_006111893.1 CDS UM146_15090 NC_017632.1 3124987 3125559 R COG3126 Uncharacterized protein conserved in bacteria; putative lipoprotein complement(3124987..3125559) Escherichia coli UM146 12701518 YP_006111894.1 CDS UM146_15095 NC_017632.1 3125777 3126637 D COG1946 Acyl-CoA thioesterase; acyl-CoA thioesterase II 3125777..3126637 Escherichia coli UM146 12701519 YP_006111895.1 CDS UM146_15100 NC_017632.1 3126686 3127972 R COG0004 Ammonia permease; ammonium transporter complement(3126686..3127972) Escherichia coli UM146 12701520 YP_006111896.1 CDS UM146_15105 NC_017632.1 3128002 3128340 R COG0347 Nitrogen regulatory protein PII; glutamine synthetase complement(3128002..3128340) Escherichia coli UM146 12701521 YP_006111897.1 CDS UM146_15110 NC_017632.1 3128521 3130302 R COG1132 ABC-type multidrug transport system, ATPase and permease components; putative multidrug transporter membrane\ATP-binding components complement(3128521..3130302) Escherichia coli UM146 12701522 YP_006111898.1 CDS UM146_15115 NC_017632.1 3130295 3132067 R COG1132 ABC-type multidrug transport system, ATPase and permease components; putative multidrug transporter membrane\ATP-binding components complement(3130295..3132067) Escherichia coli UM146 12701523 YP_006111899.1 CDS UM146_15120 NC_017632.1 3132097 3132555 R COG1522 Transcriptional regulators; putative LRP-like transcriptional regulator complement(3132097..3132555) Escherichia coli UM146 12701524 YP_006111900.1 CDS UM146_15125 NC_017632.1 3132707 3133528 R COG0561 Predicted hydrolases of the HAD superfamily; hypothetical protein complement(3132707..3133528) Escherichia coli UM146 12701525 YP_006111901.1 CDS UM146_15130 NC_017632.1 3133628 3135328 D COG4533 ABC-type uncharacterized transport system, periplasmic component; hypothetical protein 3133628..3135328 Escherichia coli UM146 12701526 YP_006111902.1 CDS UM146_15135 NC_017632.1 3135393 3136088 D COG0603 Predicted PP-loop superfamily ATPase; queuosine biosynthesis protein QueC 3135393..3136088 Escherichia coli UM146 12701527 YP_006111903.1 CDS UM146_15140 NC_017632.1 3136140 3136538 R COG0824 Predicted thioesterase; thioesterase superfamily protein complement(3136140..3136538) Escherichia coli UM146 12701528 YP_006111904.1 CDS UM146_15145 NC_017632.1 3136644 3137015 R COG1555 DNA uptake protein and related DNA-binding proteins; hypothetical protein complement(3136644..3137015) Escherichia coli UM146 12701529 YP_006111905.1 CDS UM146_15150 NC_017632.1 3137166 3139037 R COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase complement(3137166..3139037) Escherichia coli UM146 12701530 YP_006111906.1 CDS UM146_15155 NC_017632.1 3139229 3139501 R COG0776 Bacterial nucleoid DNA-binding protein; transcriptional regulator HU subunit beta complement(3139229..3139501) Escherichia coli UM146 12701531 YP_006111907.1 CDS UM146_15160 NC_017632.1 3139710 3142064 R COG0466 ATP-dependent Lon protease, bacterial type; DNA-binding ATP-dependent protease La complement(3139710..3142064) Escherichia coli UM146 12701532 YP_006111908.1 CDS clpX NC_017632.1 3142252 3143526 R COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX complement(3142252..3143526) Escherichia coli UM146 12701533 YP_006111909.1 CDS clpP NC_017632.1 3143652 3144275 R COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit complement(3143652..3144275) Escherichia coli UM146 12701534 YP_006111910.1 CDS tig NC_017632.1 3144529 3145818 R COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor complement(3144529..3145818) Escherichia coli UM146 12701535 YP_006111911.1 CDS UM146_15180 NC_017632.1 3145965 3146153 R hypothetical protein complement(3145965..3146153) Escherichia coli UM146 12701536 YP_006111912.1 CDS UM146_15185 NC_017632.1 3146162 3146479 R COG0271 Stress-induced morphogen (activity unknown); transcriptional regulator BolA complement(3146162..3146479) Escherichia coli UM146 12701537 YP_006111913.1 CDS UM146_15190 NC_017632.1 3146784 3147362 D COG3056 Uncharacterized lipoprotein; hypothetical protein 3146784..3147362 Escherichia coli UM146 12701538 YP_006111914.1 CDS ampG NC_017632.1 3147406 3148881 D COG0477 Permeases of the major facilitator superfamily; muropeptide transporter 3147406..3148881 Escherichia coli UM146 12701539 YP_006111915.1 CDS UM146_15200 NC_017632.1 3149340 3150287 D COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2; cytochrome o ubiquinol oxidase subunit II 3149340..3150287 Escherichia coli UM146 12701540 YP_006111916.1 CDS UM146_15205 NC_017632.1 3150309 3152300 D COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; cytochrome o ubiquinol oxidase subunit I 3150309..3152300 Escherichia coli UM146 12701541 YP_006111917.1 CDS UM146_15210 NC_017632.1 3152389 3152904 D COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3; cytochrome o ubiquinol oxidase subunit III 3152389..3152904 Escherichia coli UM146 12701542 YP_006111918.1 CDS UM146_15215 NC_017632.1 3152904 3153233 D COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4; cytochrome o ubiquinol oxidase subunit IV 3152904..3153233 Escherichia coli UM146 12701543 YP_006111919.1 CDS UM146_15220 NC_017632.1 3153245 3154135 D COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); protoheme IX farnesyltransferase 3153245..3154135 Escherichia coli UM146 12701544 YP_006111920.1 CDS UM146_15225 NC_017632.1 3154284 3155648 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 3154284..3155648 Escherichia coli UM146 12701545 YP_006111921.1 CDS UM146_15230 NC_017632.1 3155776 3156267 R COG1666 Uncharacterized protein conserved in bacteria; putative nucleotide-binding protein complement(3155776..3156267) Escherichia coli UM146 12701546 YP_006111922.1 CDS UM146_15235 NC_017632.1 3156435 3157346 D COG1893 Ketopantoate reductase; 2-dehydropantoate 2-reductase 3156435..3157346 Escherichia coli UM146 12701547 YP_006111923.1 CDS UM146_15240 NC_017632.1 3157309 3157899 D COG0693 Putative intracellular protease/amidase; hypothetical protein 3157309..3157899 Escherichia coli UM146 12701548 YP_006111924.1 CDS UM146_15245 NC_017632.1 3157953 3159401 R COG0301 Thiamine biosynthesis ATP pyrophosphatase; thiamine biosynthesis protein ThiI complement(3157953..3159401) Escherichia coli UM146 12701549 YP_006111925.1 CDS UM146_15250 NC_017632.1 3159607 3159849 D COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 3159607..3159849 Escherichia coli UM146 12701550 YP_006111926.1 CDS UM146_15255 NC_017632.1 3159849 3160748 D COG0142 Geranylgeranyl pyrophosphate synthase; geranyltranstransferase 3159849..3160748 Escherichia coli UM146 12701551 YP_006111927.1 CDS UM146_15260 NC_017632.1 3160773 3162635 D COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 3160773..3162635 Escherichia coli UM146 12701552 YP_006111928.1 CDS UM146_15265 NC_017632.1 3162690 3163664 D COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); aldoketo-oxidoreductase, NADP-binding protein 3162690..3163664 Escherichia coli UM146 12701553 YP_006111929.1 CDS UM146_15270 NC_017632.1 3163718 3164236 R COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidylglycerophosphatase A complement(3163718..3164236) Escherichia coli UM146 12701554 YP_006111930.1 CDS UM146_15275 NC_017632.1 3164214 3165191 R COG0611 Thiamine monophosphate kinase; thiamine monophosphate kinase complement(3164214..3165191) Escherichia coli UM146 12701555 YP_006111931.1 CDS nusB NC_017632.1 3165269 3165688 R COG0781 Transcription termination factor; transcription antitermination protein NusB complement(3165269..3165688) Escherichia coli UM146 12701556 YP_006111932.1 CDS ribH NC_017632.1 3165708 3166178 R COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase complement(3165708..3166178) Escherichia coli UM146 12701557 YP_006111933.1 CDS ribD NC_017632.1 3166267 3167352 R COG0117 Pyrimidine deaminase; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase complement(3166267..3167352) Escherichia coli UM146 12701558 YP_006111934.1 CDS nrdR NC_017632.1 3167374 3167823 R COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains; transcriptional regulator NrdR complement(3167374..3167823) Escherichia coli UM146 12701559 YP_006111935.1 CDS UM146_15300 NC_017632.1 3167974 3168513 D hypothetical protein 3167974..3168513 Escherichia coli UM146 12701560 YP_006111936.1 CDS UM146_15305 NC_017632.1 3168811 3169695 D COG3248 Nucleoside-binding outer membrane protein; nucleoside channel phage T6/colicin K receptor 3168811..3169695 Escherichia coli UM146 12701561 YP_006111937.1 CDS UM146_15310 NC_017632.1 3169733 3170080 R hypothetical protein complement(3169733..3170080) Escherichia coli UM146 12701562 YP_006111938.1 CDS secF NC_017632.1 3170210 3171181 R COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF complement(3170210..3171181) Escherichia coli UM146 12701563 YP_006111939.1 CDS secD NC_017632.1 3171192 3173006 R COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD complement(3171192..3173006) Escherichia coli UM146 12701564 YP_006111940.1 CDS yajC NC_017632.1 3173067 3173399 R COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC complement(3173067..3173399) Escherichia coli UM146 12701565 YP_006111941.1 CDS tgt NC_017632.1 3173422 3174549 R COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(3173422..3174549) Escherichia coli UM146 12701566 YP_006111942.1 CDS queA NC_017632.1 3174604 3175674 R COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(3174604..3175674) Escherichia coli UM146 12701567 YP_006111943.1 CDS UM146_15340 NC_017632.1 3175893 3176474 D COG3124 Uncharacterized protein conserved in bacteria; acyl carrier protein phosphodiesterase 3175893..3176474 Escherichia coli UM146 12701568 YP_006111944.1 CDS UM146_15345 NC_017632.1 3176479 3178293 R COG0366 Glycosidases; maltodextrin glucosidase complement(3176479..3178293) Escherichia coli UM146 12701569 YP_006111945.1 CDS proY NC_017632.1 3178452 3179825 R COG1113 Gamma-aminobutyrate permease and related permeases; putative proline-specific permease complement(3178452..3179825) Escherichia coli UM146 12701570 YP_006111946.1 CDS UM146_15355 NC_017632.1 3179901 3181220 R COG1114 Branched-chain amino acid permeases; branched-chain amino acid transport system II carrier protein complement(3179901..3181220) Escherichia coli UM146 12701571 YP_006111947.1 CDS phoR NC_017632.1 3181627 3182922 R COG0642 Signal transduction histidine kinase; phosphate regulon sensor protein complement(3181627..3182922) Escherichia coli UM146 12701572 YP_006111948.1 CDS UM146_15365 NC_017632.1 3182980 3183669 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator PhoB complement(3182980..3183669) Escherichia coli UM146 12701573 YP_006111949.1 CDS UM146_15370 NC_017632.1 3183859 3185061 D COG0420 DNA repair exonuclease; exonuclease subunit SbcD 3183859..3185061 Escherichia coli UM146 12701574 YP_006111950.1 CDS UM146_15375 NC_017632.1 3185058 3188201 D COG0419 ATPase involved in DNA repair; exonuclease subunit SbcC 3185058..3188201 Escherichia coli UM146 12701575 YP_006111951.1 CDS UM146_15380 NC_017632.1 3188243 3189511 D COG2814 Arabinose efflux permease; MFS transport protein AraJ 3188243..3189511 Escherichia coli UM146 12701576 YP_006111952.1 CDS UM146_15385 NC_017632.1 3189780 3190688 R COG1940 Transcriptional regulator/sugar kinase; fructokinase complement(3189780..3190688) Escherichia coli UM146 12701577 YP_006111953.1 CDS UM146_15390 NC_017632.1 3190813 3191724 D COG2974 DNA recombination-dependent growth factor C; putative exonuclease RdgC 3190813..3191724 Escherichia coli UM146 12701578 YP_006111954.1 CDS UM146_15395 NC_017632.1 3191882 3192163 R hypothetical protein complement(3191882..3192163) Escherichia coli UM146 12701579 YP_006111955.1 CDS UM146_15400 NC_017632.1 3192163 3192267 D hypothetical protein 3192163..3192267 Escherichia coli UM146 12701580 YP_006111956.1 CDS UM146_15405 NC_017632.1 3192264 3192380 D hypothetical protein 3192264..3192380 Escherichia coli UM146 12701581 YP_006111957.1 CDS UM146_15410 NC_017632.1 3192371 3192655 R COG3123 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3192371..3192655) Escherichia coli UM146 12701582 YP_006111958.1 CDS UM146_15415 NC_017632.1 3192727 3193404 R hypothetical protein complement(3192727..3193404) Escherichia coli UM146 12701583 YP_006111959.1 CDS UM146_15420 NC_017632.1 3193662 3193853 R hypothetical protein complement(3193662..3193853) Escherichia coli UM146 12701584 YP_006111960.1 CDS aroL NC_017632.1 3193903 3194427 R COG0703 Shikimate kinase; shikimate kinase complement(3193903..3194427) Escherichia coli UM146 12701585 YP_006111961.1 CDS UM146_15430 NC_017632.1 3194610 3195068 R COG1671 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3194610..3195068) Escherichia coli UM146 12701586 YP_006111962.1 CDS UM146_15435 NC_017632.1 3195188 3195997 D COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 3195188..3195997 Escherichia coli UM146 12701587 YP_006111963.1 CDS adrA NC_017632.1 3196014 3197129 R COG2199 FOG: GGDEF domain; diguanylate cyclase AdrA complement(3196014..3197129) Escherichia coli UM146 12701588 YP_006111964.1 CDS UM146_15445 NC_017632.1 3197231 3197551 R hypothetical protein complement(3197231..3197551) Escherichia coli UM146 12701589 YP_006111965.1 CDS UM146_15450 NC_017632.1 3197670 3199085 R COG1785 Alkaline phosphatase; alkaline phosphatase complement(3197670..3199085) Escherichia coli UM146 12701590 YP_006111966.1 CDS UM146_15455 NC_017632.1 3199186 3199446 R hypothetical protein complement(3199186..3199446) Escherichia coli UM146 12701591 YP_006111967.1 CDS UM146_15460 NC_017632.1 3199445 3199594 D hypothetical protein 3199445..3199594 Escherichia coli UM146 12701592 YP_006111968.1 CDS UM146_15465 NC_017632.1 3199709 3199831 R hypothetical protein complement(3199709..3199831) Escherichia coli UM146 12701593 YP_006111969.1 CDS ddl NC_017632.1 3199909 3201003 D COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanyl-alanine synthetase A 3199909..3201003 Escherichia coli UM146 12701594 YP_006111970.1 CDS UM146_15475 NC_017632.1 3201027 3201239 R hypothetical protein complement(3201027..3201239) Escherichia coli UM146 12701595 YP_006111971.1 CDS UM146_15480 NC_017632.1 3201499 3201807 D Inner membrane protein yaiY 3201499..3201807 Escherichia coli UM146 12701596 YP_006111972.1 CDS UM146_15485 NC_017632.1 3201866 3202960 R putative DNA-binding transcriptional regulator complement(3201866..3202960) Escherichia coli UM146 12701597 YP_006111973.1 CDS UM146_15490 NC_017632.1 3202973 3204193 R COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components; transporter complement(3202973..3204193) Escherichia coli UM146 12701598 YP_006111974.1 CDS UM146_15495 NC_017632.1 3204545 3205702 D COG1680 Beta-lactamase class C and other penicillin binding proteins; beta-lactam binding protein AmpH 3204545..3205702 Escherichia coli UM146 12701599 YP_006111975.1 CDS UM146_15500 NC_017632.1 3205703 3206326 R COG2186 Transcriptional regulators; putative DNA-binding transcriptional regulator complement(3205703..3206326) Escherichia coli UM146 12701600 YP_006111976.1 CDS UM146_15515 NC_017632.1 3209925 3210899 D COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 3209925..3210899 Escherichia coli UM146 12701601 YP_006111977.1 CDS tauD NC_017632.1 3210939 3211790 R COG2175 Probable taurine catabolism dioxygenase; taurine dioxygenase complement(3210939..3211790) Escherichia coli UM146 12701602 YP_006111978.1 CDS UM146_15525 NC_017632.1 3211787 3212614 R COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; taurine transporter subunit complement(3211787..3212614) Escherichia coli UM146 12701603 YP_006111979.1 CDS tauB NC_017632.1 3212611 3213378 R COG4525 ABC-type taurine transport system, ATPase component; taurine transporter ATP-binding subunit complement(3212611..3213378) Escherichia coli UM146 12701604 YP_006111980.1 CDS tauA NC_017632.1 3213391 3214353 R COG4521 ABC-type taurine transport system, periplasmic component; taurine transporter substrate binding subunit complement(3213391..3214353) Escherichia coli UM146 12701605 YP_006111981.1 CDS UM146_15540 NC_017632.1 3214961 3215632 D COG2120 Uncharacterized proteins, LmbE homologs; hypothetical protein 3214961..3215632 Escherichia coli UM146 12701606 YP_006111982.1 CDS UM146_15545 NC_017632.1 3215642 3216838 D COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; putative membrane-associated glycosyltransferase 3215642..3216838 Escherichia coli UM146 12701607 YP_006111983.1 CDS UM146_15550 NC_017632.1 3216873 3217397 D COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); putative transferase 3216873..3217397 Escherichia coli UM146 12701608 YP_006111984.1 CDS UM146_15555 NC_017632.1 3217399 3218172 D hypothetical protein 3217399..3218172 Escherichia coli UM146 12701609 YP_006111985.1 CDS UM146_15560 NC_017632.1 3218361 3218636 D COG1937 Uncharacterized protein conserved in bacteria; regulator protein FrmR 3218361..3218636 Escherichia coli UM146 12701610 YP_006111986.1 CDS UM146_15565 NC_017632.1 3218671 3219780 D COG1062 Zn-dependent alcohol dehydrogenases, class III; alcohol dehydrogenase 3218671..3219780 Escherichia coli UM146 12701611 YP_006111987.1 CDS UM146_15570 NC_017632.1 3219873 3220706 D COG0627 Predicted esterase; S-formylglutathione hydrolase 3219873..3220706 Escherichia coli UM146 12701612 YP_006111988.1 CDS UM146_15575 NC_017632.1 3220932 3221471 R COG3122 Uncharacterized protein conserved in bacteria; nucleoprotein/polynucleotide-associated enzyme complement(3220932..3221471) Escherichia coli UM146 12701613 YP_006111989.1 CDS lacI NC_017632.1 3221673 3222755 D COG1609 Transcriptional regulators; lac repressor 3221673..3222755 Escherichia coli UM146 12701614 YP_006111990.1 CDS lacZ NC_017632.1 3222878 3225952 D COG3250 Beta-galactosidase/beta-glucuronidase; beta-D-galactosidase 3222878..3225952 Escherichia coli UM146 12701615 YP_006111991.1 CDS lacY NC_017632.1 3226004 3227257 D COG0477 Permeases of the major facilitator superfamily; galactoside permease 3226004..3227257 Escherichia coli UM146 12701616 YP_006111992.1 CDS lacA NC_017632.1 3227272 3227934 D COG0110 Acetyltransferase (isoleucine patch superfamily); galactoside O-acetyltransferase 3227272..3227934 Escherichia coli UM146 12701617 YP_006111993.1 CDS UM146_15600 NC_017632.1 3228055 3229338 R COG0402 Cytosine deaminase and related metal-dependent hydrolases; cytosine deaminase complement(3228055..3229338) Escherichia coli UM146 12701618 YP_006111994.1 CDS codB NC_017632.1 3229328 3230587 R COG1457 Purine-cytosine permease and related proteins; cytosine permease complement(3229328..3230587) Escherichia coli UM146 12701619 YP_006111995.1 CDS prpE NC_017632.1 3230912 3232798 R COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; propionyl-CoA synthetase complement(3230912..3232798) Escherichia coli UM146 12701620 YP_006111996.1 CDS prpD NC_017632.1 3232838 3234289 R COG2079 Uncharacterized protein involved in propionate catabolism; 2-methylcitrate dehydratase complement(3232838..3234289) Escherichia coli UM146 12701621 YP_006111997.1 CDS UM146_15620 NC_017632.1 3234323 3235435 R COG0372 Citrate synthase; methylcitrate synthase complement(3234323..3235435) Escherichia coli UM146 12701622 YP_006111998.1 CDS prpB NC_017632.1 3235536 3236426 R COG2513 PEP phosphonomutase and related enzymes; 2-methylisocitrate lyase complement(3235536..3236426) Escherichia coli UM146 12701623 YP_006111999.1 CDS UM146_15640 NC_017632.1 3238352 3238627 R hypothetical protein complement(3238352..3238627) Escherichia coli UM146 12701624 YP_006112000.1 CDS UM146_15645 NC_017632.1 3238813 3239445 D COG1280 Putative threonine efflux protein; neutral amino-acid efflux system 3238813..3239445 Escherichia coli UM146 12701625 YP_006112001.1 CDS UM146_15650 NC_017632.1 3239462 3239707 R hypothetical protein complement(3239462..3239707) Escherichia coli UM146 12701626 YP_006112002.1 CDS UM146_15655 NC_017632.1 3240329 3241378 R COG1064 Zn-dependent alcohol dehydrogenases; putative oxidoreductase, Zn-dependent and NAD(P)-binding protein complement(3240329..3241378) Escherichia coli UM146 12701628 YP_006112003.1 CDS UM146_15660 NC_017632.1 3241465 3242421 R COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; putative permease component of sugar ABC transport system complement(3241465..3242421) Escherichia coli UM146 12701629 YP_006112004.1 CDS UM146_15665 NC_017632.1 3242418 3243389 R COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; putative permease of transport system probably ribose specific complement(3242418..3243389) Escherichia coli UM146 12701630 YP_006112005.1 CDS UM146_15670 NC_017632.1 3243382 3244866 R COG1129 ABC-type sugar transport system, ATPase component; sugar ABC transporter ATP-binding protein complement(3243382..3244866) Escherichia coli UM146 12701631 YP_006112006.1 CDS UM146_15675 NC_017632.1 3244915 3245901 R COG1879 ABC-type sugar transport system, periplasmic component; putative sugar-binding protein complement(3244915..3245901) Escherichia coli UM146 12701632 YP_006112007.1 CDS UM146_15680 NC_017632.1 3246152 3246562 R COG4405 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3246152..3246562) Escherichia coli UM146 12701633 YP_006112008.1 CDS UM146_15685 NC_017632.1 3246860 3248242 R COG0402 Cytosine deaminase and related metal-dependent hydrolases; putative deaminase complement(3246860..3248242) Escherichia coli UM146 12701634 YP_006112009.1 CDS UM146_15690 NC_017632.1 3248252 3249202 R COG0549 Carbamate kinase; putative carbamate kinase complement(3248252..3249202) Escherichia coli UM146 12701635 YP_006112010.1 CDS UM146_15695 NC_017632.1 3249356 3250774 R hypothetical protein complement(3249356..3250774) Escherichia coli UM146 12701636 YP_006112011.1 CDS UM146_15700 NC_017632.1 3250774 3252321 R COG0074 Succinyl-CoA synthetase, alpha subunit; putative enzyme with acyl-CoA domain complement(3250774..3252321) Escherichia coli UM146 12701637 YP_006112012.1 CDS UM146_15705 NC_017632.1 3252311 3253174 R hypothetical protein complement(3252311..3253174) Escherichia coli UM146 12701638 YP_006112013.1 CDS UM146_15710 NC_017632.1 3253214 3253819 R COG0666 FOG: Ankyrin repeat; putative protein with ankyrin domain complement(3253214..3253819) Escherichia coli UM146 12701639 YP_006112014.1 CDS UM146_15715 NC_017632.1 3254077 3254574 D hypothetical protein 3254077..3254574 Escherichia coli UM146 12701640 YP_006112015.1 CDS UM146_15720 NC_017632.1 3254666 3255559 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 3254666..3255559 Escherichia coli UM146 12701641 YP_006112016.1 CDS UM146_15725 NC_017632.1 3255639 3256727 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; putative DNA-binding transcriptional regulator complement(3255639..3256727) Escherichia coli UM146 12701642 YP_006112017.1 CDS UM146_15730 NC_017632.1 3257605 3259638 R COG1292 Choline-glycine betaine transporter; choline transport protein BetT complement(3257605..3259638) Escherichia coli UM146 12701643 YP_006112018.1 CDS UM146_15735 NC_017632.1 3259767 3260354 D COG1309 Transcriptional regulator; transcriptional regulator BetI 3259767..3260354 Escherichia coli UM146 12701644 YP_006112019.1 CDS UM146_15740 NC_017632.1 3260377 3261840 D COG1012 NAD-dependent aldehyde dehydrogenases; betaine aldehyde dehydrogenase 3260377..3261840 Escherichia coli UM146 12701645 YP_006112020.1 CDS UM146_15745 NC_017632.1 3261854 3263542 D COG2303 Choline dehydrogenase and related flavoproteins; choline dehydrogenase 3261854..3263542 Escherichia coli UM146 12701646 YP_006112021.1 CDS UM146_15750 NC_017632.1 3263567 3263794 R hypothetical protein complement(3263567..3263794) Escherichia coli UM146 12701647 YP_006112022.1 CDS UM146_15755 NC_017632.1 3264611 3265174 D COG0582 Integrase; putative phage integrase 3264611..3265174 Escherichia coli UM146 12701648 YP_006112023.1 CDS UM146_15760 NC_017632.1 3265503 3266297 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; putative transcriptional regulator; LuxR-type HTH domain protein 3265503..3266297 Escherichia coli UM146 12701649 YP_006112024.1 CDS UM146_15765 NC_017632.1 3266451 3267212 D hypothetical protein 3266451..3267212 Escherichia coli UM146 12701650 YP_006112025.1 CDS UM146_15770 NC_017632.1 3267254 3269551 D COG3468 Type V secretory pathway, adhesin AidA; Putative adhesin; putative outer membrane autotransporter barrel 3267254..3269551 Escherichia coli UM146 12701651 YP_006112026.1 CDS UM146_15775 NC_017632.1 3269735 3270328 D hypothetical protein 3269735..3270328 Escherichia coli UM146 12701652 YP_006112027.1 CDS UM146_15780 NC_017632.1 3270645 3271340 R COG1556 Uncharacterized conserved protein; hypothetical protein complement(3270645..3271340) Escherichia coli UM146 12701653 YP_006112028.1 CDS UM146_15785 NC_017632.1 3271333 3272760 R COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain; putative oxidoreductase subunit with NAD(P)-binding domain and ferredoxin-like domain complement(3271333..3272760) Escherichia coli UM146 12701654 YP_006112029.1 CDS UM146_15790 NC_017632.1 3272771 3273490 R COG0247 Fe-S oxidoreductase; putative hydroxyacid oxidoreductase (Fe-S centre) complement(3272771..3273490) Escherichia coli UM146 12701655 YP_006112030.1 CDS UM146_15795 NC_017632.1 3274017 3274871 R COG2207 AraC-type DNA-binding domain-containing proteins; putative AraC-type DNA-binding transcriptional regulator complement(3274017..3274871) Escherichia coli UM146 12701656 YP_006112031.1 CDS UM146_15800 NC_017632.1 3275098 3276423 D COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; pyridine nucleotide-disulfide oxidoreductase 3275098..3276423 Escherichia coli UM146 12701657 YP_006112032.1 CDS UM146_15805 NC_017632.1 3276532 3276768 D hypothetical protein 3276532..3276768 Escherichia coli UM146 12701658 YP_006112033.1 CDS UM146_15810 NC_017632.1 3276780 3277373 D COG3059 Predicted membrane protein; hypothetical protein 3276780..3277373 Escherichia coli UM146 12701659 YP_006112034.1 CDS UM146_15815 NC_017632.1 3277533 3278402 R COG0656 Aldo/keto reductases, related to diketogulonate reductase; putative reductase complement(3277533..3278402) Escherichia coli UM146 12701660 YP_006112035.1 CDS UM146_15820 NC_017632.1 3278650 3279507 D COG2207 AraC-type DNA-binding domain-containing proteins; putative transcriptional regulator 3278650..3279507 Escherichia coli UM146 12701661 YP_006112036.1 CDS UM146_15825 NC_017632.1 3279632 3283882 R putative adhesin complement(3279632..3283882) Escherichia coli UM146 12701662 YP_006112037.1 CDS UM146_15830 NC_017632.1 3284448 3285299 D COG0656 Aldo/keto reductases, related to diketogulonate reductase; putative aldo-keto reductase 3284448..3285299 Escherichia coli UM146 12701663 YP_006112038.1 CDS UM146_15835 NC_017632.1 3285326 3286315 D COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); putative aldo-keto reductase 3285326..3286315 Escherichia coli UM146 12701664 YP_006112039.1 CDS UM146_15840 NC_017632.1 3286346 3287239 R COG0583 Transcriptional regulator; putative transcriptional regulator, lysR family protein complement(3286346..3287239) Escherichia coli UM146 12701665 YP_006112040.1 CDS UM146_15845 NC_017632.1 3287439 3288428 R COG0583 Transcriptional regulator; putative LysR-like transcriptional regulator complement(3287439..3288428) Escherichia coli UM146 12701666 YP_006112041.1 CDS UM146_15850 NC_017632.1 3288522 3289442 D COG1073 Hydrolases of the alpha/beta superfamily; hypothetical protein 3288522..3289442 Escherichia coli UM146 12701667 YP_006112042.1 CDS UM146_15855 NC_017632.1 3289614 3290756 D COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; putative NADH-dependent flavin oxidoreductase 3289614..3290756 Escherichia coli UM146 12701668 YP_006112043.1 CDS UM146_15860 NC_017632.1 3291230 3291331 D hypothetical protein 3291230..3291331 Escherichia coli UM146 12701669 YP_006112044.1 CDS rpmE2 NC_017632.1 3291696 3291959 D COG0254 Ribosomal protein L31; 50S ribosomal protein L31 3291696..3291959 Escherichia coli UM146 12701670 YP_006112045.1 CDS rpmJ NC_017632.1 3291959 3292099 D COG0257 Ribosomal protein L36; 50S ribosomal protein L36 3291959..3292099 Escherichia coli UM146 12701671 YP_006112046.1 CDS UM146_15875 NC_017632.1 3293183 3293725 D COG2771 DNA-binding HTH domain-containing proteins; fimbrillin MatA 3293183..3293725 Escherichia coli UM146 12701672 YP_006112047.1 CDS UM146_15880 NC_017632.1 3293768 3294385 D hypothetical protein 3293768..3294385 Escherichia coli UM146 12701673 YP_006112048.1 CDS UM146_15885 NC_017632.1 3294442 3295110 D hypothetical protein 3294442..3295110 Escherichia coli UM146 12701674 YP_006112049.1 CDS UM146_15890 NC_017632.1 3295136 3297661 D hypothetical protein 3295136..3297661 Escherichia coli UM146 12701675 YP_006112050.1 CDS UM146_15895 NC_017632.1 3297651 3299294 D putative surface or exported protein 3297651..3299294 Escherichia coli UM146 12701676 YP_006112051.1 CDS UM146_15900 NC_017632.1 3299263 3299973 D hypothetical protein 3299263..3299973 Escherichia coli UM146 12701677 YP_006112052.1 CDS UM146_15905 NC_017632.1 3300280 3300609 D COG0727 Predicted Fe-S-cluster oxidoreductase; putative ferredoxin 3300280..3300609 Escherichia coli UM146 12701678 YP_006112053.1 CDS UM146_15910 NC_017632.1 3300858 3301472 R COG3477 Predicted periplasmic/secreted protein; hypothetical protein complement(3300858..3301472) Escherichia coli UM146 12701679 YP_006112054.1 CDS UM146_15915 NC_017632.1 3301687 3301872 R hypothetical protein complement(3301687..3301872) Escherichia coli UM146 12701680 YP_006112055.1 CDS UM146_15920 NC_017632.1 3302296 3302472 R COG1662 Transposase and inactivated derivatives, IS1 family; transposase InsB (ORF1) IS1 complement(3302296..3302472) Escherichia coli UM146 12701681 YP_006112056.1 CDS UM146_15925 NC_017632.1 3302774 3302989 R COG3677 Transposase and inactivated derivatives; transposase InsA (ORF1) IS1 complement(3302774..3302989) Escherichia coli UM146 12701682 YP_006112057.1 CDS UM146_15930 NC_017632.1 3304302 3307712 D COG3468 Type V secretory pathway, adhesin AidA; Vacuolating autotransporter toxin 3304302..3307712 Escherichia coli UM146 12701683 YP_006112058.1 CDS UM146_15935 NC_017632.1 3307868 3308362 D COG1846 Transcriptional regulators; hypothetical protein 3307868..3308362 Escherichia coli UM146 12701684 YP_006112059.1 CDS UM146_15940 NC_017632.1 3308797 3309135 R COG0582 Integrase; CP4-like integrase complement(3308797..3309135) Escherichia coli UM146 12701685 YP_006112060.1 CDS UM146_15945 NC_017632.1 3309604 3310059 D hypothetical protein 3309604..3310059 Escherichia coli UM146 12701687 YP_006112061.1 CDS UM146_15950 NC_017632.1 3310032 3310517 D hypothetical protein 3310032..3310517 Escherichia coli UM146 12701688 YP_006112062.1 CDS UM146_15955 NC_017632.1 3310520 3310630 R hypothetical protein complement(3310520..3310630) Escherichia coli UM146 12701689 YP_006112063.1 CDS UM146_15960 NC_017632.1 3311024 3311488 R COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator protein complement(3311024..3311488) Escherichia coli UM146 12701690 YP_006112064.1 CDS UM146_15965 NC_017632.1 3311727 3312224 D COG0155 Sulfite reductase, beta subunit (hemoprotein); hypothetical protein 3311727..3312224 Escherichia coli UM146 12701691 YP_006112065.1 CDS UM146_15970 NC_017632.1 3312382 3312939 R COG1961 Site-specific recombinases, DNA invertase Pin homologs; Resolvase domain-containing protein complement(3312382..3312939) Escherichia coli UM146 12701692 YP_006112066.1 CDS UM146_15975 NC_017632.1 3313176 3315440 D COG3593 Predicted ATP-dependent endonuclease of the OLD family; hypothetical protein 3313176..3315440 Escherichia coli UM146 12701693 YP_006112067.1 CDS UM146_15980 NC_017632.1 3315437 3317275 D COG0210 Superfamily I DNA and RNA helicases; pathogenesis-like protein 3315437..3317275 Escherichia coli UM146 12701694 YP_006112068.1 CDS UM146_15985 NC_017632.1 3317439 3317771 D nipsnap family protein 3317439..3317771 Escherichia coli UM146 12701695 YP_006112069.1 CDS UM146_15990 NC_017632.1 3318041 3319651 D hypothetical protein 3318041..3319651 Escherichia coli UM146 12701696 YP_006112070.1 CDS UM146_15995 NC_017632.1 3319978 3321909 R COG0582 Integrase; integrase family protein complement(3319978..3321909) Escherichia coli UM146 12701697 YP_006112071.1 CDS proA NC_017632.1 3322187 3323440 R COG0014 Gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(3322187..3323440) Escherichia coli UM146 12701699 YP_006112072.1 CDS UM146_16005 NC_017632.1 3323452 3324555 R COG0263 Glutamate 5-kinase; gamma-glutamyl kinase complement(3323452..3324555) Escherichia coli UM146 12701700 YP_006112073.1 CDS UM146_16010 NC_017632.1 3324844 3325899 D COG3203 Outer membrane protein (porin); outer membrane phosphoporin protein E 3324844..3325899 Escherichia coli UM146 12701701 YP_006112074.1 CDS UM146_16015 NC_017632.1 3326009 3326410 R DNA-binding transcriptional regulator Crl complement(3326009..3326410) Escherichia coli UM146 12701702 YP_006112075.1 CDS frsA NC_017632.1 3326468 3327712 R COG1073 Hydrolases of the alpha/beta superfamily; fermentation/respiration switch protein complement(3326468..3327712) Escherichia coli UM146 12701703 YP_006112076.1 CDS UM146_16025 NC_017632.1 3327804 3328262 R COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; xanthine-guanine phosphoribosyltransferase complement(3327804..3328262) Escherichia coli UM146 12701704 YP_006112077.1 CDS UM146_16030 NC_017632.1 3328523 3329980 D COG2195 Di- and tripeptidases; aminoacyl-histidine dipeptidase 3328523..3329980 Escherichia coli UM146 12701705 YP_006112078.1 CDS prfH NC_017632.1 3330037 3330651 R COG1186 Protein chain release factor B; peptide chain release factor-like protein complement(3330037..3330651) Escherichia coli UM146 12701706 YP_006112079.1 CDS UM146_16040 NC_017632.1 3330648 3331787 R COG1690 Uncharacterized conserved protein; hypothetical protein complement(3330648..3331787) Escherichia coli UM146 12701707 YP_006112080.1 CDS UM146_16045 NC_017632.1 3331977 3332429 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein complement(3331977..3332429) Escherichia coli UM146 12701708 YP_006112081.1 CDS UM146_16050 NC_017632.1 3332439 3332837 R putative toxin YafO complement(3332439..3332837) Escherichia coli UM146 12701709 YP_006112082.1 CDS UM146_16055 NC_017632.1 3332840 3333133 R COG2161 Antitoxin of toxin-antitoxin stability system; putative antitoxin of the YafO-YafN toxin-antitoxin system complement(3332840..3333133) Escherichia coli UM146 12701710 YP_006112083.1 CDS UM146_16060 NC_017632.1 3333185 3334240 R COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA polymerase IV complement(3333185..3334240) Escherichia coli UM146 12701711 YP_006112084.1 CDS UM146_16065 NC_017632.1 3334311 3335081 R COG1360 Flagellar motor protein; hypothetical protein complement(3334311..3335081) Escherichia coli UM146 12701712 YP_006112085.1 CDS UM146_16070 NC_017632.1 3335041 3336780 D COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar system protein 3335041..3336780 Escherichia coli UM146 12701713 YP_006112086.1 CDS UM146_16075 NC_017632.1 3337099 3337596 R COG1943 Transposase and inactivated derivatives; hypothetical protein complement(3337099..3337596) Escherichia coli UM146 12701714 YP_006112087.1 CDS UM146_16080 NC_017632.1 3337772 3338530 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); putative exported hydrolase complement(3337772..3338530) Escherichia coli UM146 12701715 YP_006112088.1 CDS UM146_16085 NC_017632.1 3338833 3339573 D COG3034 Uncharacterized protein conserved in bacteria; hypothetical protein 3338833..3339573 Escherichia coli UM146 12701716 YP_006112089.1 CDS UM146_16090 NC_017632.1 3339544 3340311 R COG0121 Predicted glutamine amidotransferase; putative glutamine amidotransferases class-II complement(3339544..3340311) Escherichia coli UM146 12701717 YP_006112090.1 CDS gmhA NC_017632.1 3340516 3341094 R COG0279 Phosphoheptose isomerase; phosphoheptose isomerase complement(3340516..3341094) Escherichia coli UM146 12701718 YP_006112091.1 CDS fadE NC_017632.1 3341334 3343778 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 3341334..3343778 Escherichia coli UM146 12701719 YP_006112092.1 CDS UM146_16105 NC_017632.1 3343821 3344294 R C-lysozyme inhibitor complement(3343821..3344294) Escherichia coli UM146 12701720 YP_006112093.1 CDS UM146_16110 NC_017632.1 3344448 3345218 D COG0388 Predicted amidohydrolase; hypothetical protein 3344448..3345218 Escherichia coli UM146 12701721 YP_006112094.1 CDS UM146_16115 NC_017632.1 3345489 3346001 R hypothetical protein complement(3345489..3346001) Escherichia coli UM146 12701722 YP_006112095.1 CDS UM146_16120 NC_017632.1 3346071 3346574 R hypothetical protein complement(3346071..3346574) Escherichia coli UM146 12701723 YP_006112096.1 CDS UM146_16125 NC_017632.1 3346803 3347288 R COG5433 Transposase; putative transposase complement(3346803..3347288) Escherichia coli UM146 12701724 YP_006112097.1 CDS UM146_16130 NC_017632.1 3347388 3347567 R putative H-repeat associated protein complement(3347388..3347567) Escherichia coli UM146 12701725 YP_006112098.1 CDS UM146_16135 NC_017632.1 3347825 3348115 R hypothetical protein complement(3347825..3348115) Escherichia coli UM146 12701726 YP_006112099.1 CDS UM146_16140 NC_017632.1 3348090 3349154 R COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; hypothetical protein complement(3348090..3349154) Escherichia coli UM146 12701727 YP_006112100.1 CDS UM146_16145 NC_017632.1 3349522 3350568 R COG5351 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3349522..3350568) Escherichia coli UM146 12701728 YP_006112101.1 CDS UM146_16150 NC_017632.1 3350675 3352657 R COG3501 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3350675..3352657) Escherichia coli UM146 12701729 YP_006112102.1 CDS UM146_16155 NC_017632.1 3352673 3352783 R hypothetical protein complement(3352673..3352783) Escherichia coli UM146 12701730 YP_006112103.1 CDS UM146_16160 NC_017632.1 3352878 3353396 R COG3157 Hemolysin-coregulated protein (uncharacterized); hypothetical protein complement(3352878..3353396) Escherichia coli UM146 12701731 YP_006112104.1 CDS UM146_16165 NC_017632.1 3354102 3354605 D COG3516 Uncharacterized protein conserved in bacteria; type VI secretion protein 3354102..3354605 Escherichia coli UM146 12701732 YP_006112105.1 CDS UM146_16170 NC_017632.1 3354628 3356112 D COG3517 Uncharacterized protein conserved in bacteria; type VI secretion protein EvpB 3354628..3356112 Escherichia coli UM146 12701733 YP_006112106.1 CDS UM146_16175 NC_017632.1 3356117 3356542 D COG3518 Uncharacterized protein conserved in bacteria; type VI secretion system lysozyme-like protein 3356117..3356542 Escherichia coli UM146 12701734 YP_006112107.1 CDS UM146_16180 NC_017632.1 3356548 3358389 D COG3519 Uncharacterized protein conserved in bacteria; hypothetical protein 3356548..3358389 Escherichia coli UM146 12701735 YP_006112108.1 CDS UM146_16185 NC_017632.1 3358353 3359402 D COG3520 Uncharacterized protein conserved in bacteria; hypothetical protein 3358353..3359402 Escherichia coli UM146 12701736 YP_006112109.1 CDS UM146_16190 NC_017632.1 3359407 3360699 D COG3456 Uncharacterized conserved protein, contains FHA domain; hypothetical protein 3359407..3360699 Escherichia coli UM146 12701737 YP_006112110.1 CDS UM146_16195 NC_017632.1 3360696 3361220 D COG3521 Uncharacterized protein conserved in bacteria; hypothetical protein 3360696..3361220 Escherichia coli UM146 12701738 YP_006112111.1 CDS UM146_16200 NC_017632.1 3361223 3362569 D COG3522 Uncharacterized protein conserved in bacteria; type VI secretion protein 3361223..3362569 Escherichia coli UM146 12701739 YP_006112112.1 CDS UM146_16205 NC_017632.1 3362574 3363338 D COG3455 Uncharacterized protein conserved in bacteria; hypothetical protein 3362574..3363338 Escherichia coli UM146 12701740 YP_006112113.1 CDS UM146_16210 NC_017632.1 3363348 3366107 D COG0542 ATPases with chaperone activity, ATP-binding subunit; putative ATPase with chaperone activity 3363348..3366107 Escherichia coli UM146 12701741 YP_006112114.1 CDS UM146_16215 NC_017632.1 3366104 3366847 D type VI secretion-associated protein 3366104..3366847 Escherichia coli UM146 12701742 YP_006112115.1 CDS UM146_16220 NC_017632.1 3366852 3368294 D COG3515 Uncharacterized protein conserved in bacteria; hypothetical protein 3366852..3368294 Escherichia coli UM146 12701743 YP_006112116.1 CDS UM146_16225 NC_017632.1 3368314 3371841 D COG3523 Uncharacterized protein conserved in bacteria; hypothetical protein 3368314..3371841 Escherichia coli UM146 12701744 YP_006112117.1 CDS UM146_16240 NC_017632.1 3373228 3373707 D COG3157 Hemolysin-coregulated protein (uncharacterized); hypothetical protein 3373228..3373707 Escherichia coli UM146 12701745 YP_006112118.1 CDS UM146_16245 NC_017632.1 3374047 3374832 R putative aminopeptidase complement(3374047..3374832) Escherichia coli UM146 12701746 YP_006112119.1 CDS UM146_16250 NC_017632.1 3375370 3376110 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(3375370..3376110) Escherichia coli UM146 12701748 YP_006112120.1 CDS rnhA NC_017632.1 3376166 3376633 D COG0328 Ribonuclease HI; ribonuclease H 3376166..3376633 Escherichia coli UM146 12701749 YP_006112121.1 CDS UM146_16260 NC_017632.1 3376630 3377352 R COG0500 SAM-dependent methyltransferases; putative methyltransferase complement(3376630..3377352) Escherichia coli UM146 12701750 YP_006112122.1 CDS UM146_16265 NC_017632.1 3377386 3378141 D COG0491 Zn-dependent hydrolases, including glyoxylases; hydroxyacylglutathione hydrolase 3377386..3378141 Escherichia coli UM146 12701751 YP_006112123.1 CDS mltD NC_017632.1 3378213 3378581 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); membrane-bound lytic murein transglycosylase D 3378213..3378581 Escherichia coli UM146 12701752 YP_006112124.1 CDS mltD NC_017632.1 3378581 3379570 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); membrane-bound lytic murein transglycosylase D 3378581..3379570 Escherichia coli UM146 12701753 YP_006112125.1 CDS UM146_16280 NC_017632.1 3379617 3380387 R COG0500 SAM-dependent methyltransferases; putative S-adenosyl-L-methionine-dependent methyltransferase complement(3379617..3380387) Escherichia coli UM146 12701754 YP_006112126.1 CDS UM146_16285 NC_017632.1 3380465 3381265 R COG3021 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3380465..3381265) Escherichia coli UM146 12701755 YP_006112127.1 CDS UM146_16290 NC_017632.1 3381506 3382420 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 3381506..3382420 Escherichia coli UM146 12701756 YP_006112128.1 CDS dkgB NC_017632.1 3382417 3383220 R COG0656 Aldo/keto reductases, related to diketogulonate reductase; 2,5-diketo-D-gluconate reductase B complement(3382417..3383220) Escherichia coli UM146 12701757 YP_006112129.1 CDS UM146_16300 NC_017632.1 3388899 3389063 R hypothetical protein complement(3388899..3389063) Escherichia coli UM146 12701764 YP_006112130.1 CDS UM146_16305 NC_017632.1 3389092 3389646 D COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; hypothetical protein 3389092..3389646 Escherichia coli UM146 12701765 YP_006112131.1 CDS UM146_16310 NC_017632.1 3389622 3389879 R hypothetical protein complement(3389622..3389879) Escherichia coli UM146 12701766 YP_006112132.1 CDS aroE NC_017632.1 3389876 3390694 R COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(3389876..3390694) Escherichia coli UM146 12701767 YP_006112133.1 CDS UM146_16320 NC_017632.1 3390699 3391271 R COG0009 Putative translation factor (SUA5); putative ribosome maturation factor complement(3390699..3391271) Escherichia coli UM146 12701768 YP_006112134.1 CDS UM146_16325 NC_017632.1 3391276 3391818 R COG0551 Zn-finger domain associated with topoisomerase type I; putative DNA topoisomerase complement(3391276..3391818) Escherichia coli UM146 12701769 YP_006112135.1 CDS UM146_16330 NC_017632.1 3391847 3392320 R COG2922 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3391847..3392320) Escherichia coli UM146 12701770 YP_006112136.1 CDS UM146_16335 NC_017632.1 3392292 3393416 R COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; DNA protecting protein DprA complement(3392292..3393416) Escherichia coli UM146 12701771 YP_006112137.1 CDS def NC_017632.1 3393546 3394055 D COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase 3393546..3394055 Escherichia coli UM146 12701772 YP_006112138.1 CDS fmt NC_017632.1 3394070 3395017 D COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 3394070..3395017 Escherichia coli UM146 12701773 YP_006112139.1 CDS UM146_16350 NC_017632.1 3395069 3396358 D COG0144 tRNA and rRNA cytosine-C5-methylases; 16S rRNA methyltransferase B 3395069..3396358 Escherichia coli UM146 12701774 YP_006112140.1 CDS trkA NC_017632.1 3396380 3397756 D COG0569 K+ transport systems, NAD-binding component; potassium transporter peripheral membrane protein 3396380..3397756 Escherichia coli UM146 12701775 YP_006112141.1 CDS mscL NC_017632.1 3397886 3398299 D COG1970 Large-conductance mechanosensitive channel; large-conductance mechanosensitive channel 3397886..3398299 Escherichia coli UM146 12701776 YP_006112142.1 CDS UM146_16365 NC_017632.1 3398296 3398514 R COG3036 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3398296..3398514) Escherichia coli UM146 12701777 YP_006112143.1 CDS zntR NC_017632.1 3398570 3398995 R COG0789 Predicted transcriptional regulators; zinc-responsive transcriptional regulator complement(3398570..3398995) Escherichia coli UM146 12701778 YP_006112144.1 CDS UM146_16375 NC_017632.1 3399006 3399374 R hypothetical protein complement(3399006..3399374) Escherichia coli UM146 12701779 YP_006112145.1 CDS rplQ NC_017632.1 3399481 3399864 R COG0203 Ribosomal protein L17; 50S ribosomal protein L17 complement(3399481..3399864) Escherichia coli UM146 12701780 YP_006112146.1 CDS UM146_16385 NC_017632.1 3399905 3400894 R COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha complement(3399905..3400894) Escherichia coli UM146 12701781 YP_006112147.1 CDS rpsD NC_017632.1 3400920 3401540 R COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 complement(3400920..3401540) Escherichia coli UM146 12701782 YP_006112148.1 CDS UM146_16395 NC_017632.1 3401574 3401963 R COG0100 Ribosomal protein S11; 30S ribosomal protein S11 complement(3401574..3401963) Escherichia coli UM146 12701783 YP_006112149.1 CDS rpsM NC_017632.1 3401980 3402336 R COG0099 Ribosomal protein S13; 30S ribosomal protein S13 complement(3401980..3402336) Escherichia coli UM146 12701784 YP_006112150.1 CDS rpmJ NC_017632.1 3402483 3402599 R COG0257 Ribosomal protein L36; 50S ribosomal protein L36 complement(3402483..3402599) Escherichia coli UM146 12701785 YP_006112151.1 CDS secY NC_017632.1 3402631 3403962 R COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY complement(3402631..3403962) Escherichia coli UM146 12701786 YP_006112152.1 CDS rplO NC_017632.1 3403970 3404404 R COG0200 Ribosomal protein L15; 50S ribosomal protein L15 complement(3403970..3404404) Escherichia coli UM146 12701787 YP_006112153.1 CDS rpmD NC_017632.1 3404408 3404587 R COG1841 Ribosomal protein L30/L7E; 50S ribosomal protein L30 complement(3404408..3404587) Escherichia coli UM146 12701788 YP_006112154.1 CDS rpsE NC_017632.1 3404591 3405094 R COG0098 Ribosomal protein S5; 30S ribosomal protein S5 complement(3404591..3405094) Escherichia coli UM146 12701789 YP_006112155.1 CDS rplR NC_017632.1 3405109 3405462 R COG0256 Ribosomal protein L18; 50S ribosomal protein L18 complement(3405109..3405462) Escherichia coli UM146 12701790 YP_006112156.1 CDS rplF NC_017632.1 3405472 3406005 R COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 complement(3405472..3406005) Escherichia coli UM146 12701791 YP_006112157.1 CDS rpsH NC_017632.1 3406018 3406410 R COG0096 Ribosomal protein S8; 30S ribosomal protein S8 complement(3406018..3406410) Escherichia coli UM146 12701792 YP_006112158.1 CDS rpsN NC_017632.1 3406444 3406749 R COG0199 Ribosomal protein S14; 30S ribosomal protein S14 complement(3406444..3406749) Escherichia coli UM146 12701793 YP_006112159.1 CDS rplE NC_017632.1 3406764 3407303 R COG0094 Ribosomal protein L5; 50S ribosomal protein L5 complement(3406764..3407303) Escherichia coli UM146 12701794 YP_006112160.1 CDS rplX NC_017632.1 3407318 3407632 R COG0198 Ribosomal protein L24; 50S ribosomal protein L24 complement(3407318..3407632) Escherichia coli UM146 12701795 YP_006112161.1 CDS rplN NC_017632.1 3407643 3408014 R COG0093 Ribosomal protein L14; 50S ribosomal protein L14 complement(3407643..3408014) Escherichia coli UM146 12701796 YP_006112162.1 CDS rpsQ NC_017632.1 3408179 3408433 R COG0186 Ribosomal protein S17; 30S ribosomal protein S17 complement(3408179..3408433) Escherichia coli UM146 12701797 YP_006112163.1 CDS UM146_16470 NC_017632.1 3408433 3408624 R COG0255 Ribosomal protein L29; 50S ribosomal protein L29 complement(3408433..3408624) Escherichia coli UM146 12701798 YP_006112164.1 CDS rplP NC_017632.1 3408624 3409034 R COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 complement(3408624..3409034) Escherichia coli UM146 12701799 YP_006112165.1 CDS rpsC NC_017632.1 3409047 3409748 R COG0092 Ribosomal protein S3; 30S ribosomal protein S3 complement(3409047..3409748) Escherichia coli UM146 12701800 YP_006112166.1 CDS rplV NC_017632.1 3409766 3410098 R COG0091 Ribosomal protein L22; 50S ribosomal protein L22 complement(3409766..3410098) Escherichia coli UM146 12701801 YP_006112167.1 CDS rpsS NC_017632.1 3410113 3410391 R COG0185 Ribosomal protein S19; 30S ribosomal protein S19 complement(3410113..3410391) Escherichia coli UM146 12701802 YP_006112168.1 CDS rplB NC_017632.1 3410408 3411229 R COG0090 Ribosomal protein L2; 50S ribosomal protein L2 complement(3410408..3411229) Escherichia coli UM146 12701803 YP_006112169.1 CDS rplW NC_017632.1 3411247 3411549 R COG0089 Ribosomal protein L23; 50S ribosomal protein L23 complement(3411247..3411549) Escherichia coli UM146 12701804 YP_006112170.1 CDS rplD NC_017632.1 3411546 3412151 R COG0088 Ribosomal protein L4; 50S ribosomal protein L4 complement(3411546..3412151) Escherichia coli UM146 12701805 YP_006112171.1 CDS rplC NC_017632.1 3412162 3412791 R COG0087 Ribosomal protein L3; 50S ribosomal protein L3 complement(3412162..3412791) Escherichia coli UM146 12701806 YP_006112172.1 CDS rpsJ NC_017632.1 3412824 3413135 R COG0051 Ribosomal protein S10; 30S ribosomal protein S10 complement(3412824..3413135) Escherichia coli UM146 12701807 YP_006112173.1 CDS UM146_16520 NC_017632.1 3413373 3413792 R chromosome replication protein PioO complement(3413373..3413792) Escherichia coli UM146 12701808 YP_006112174.1 CDS UM146_16525 NC_017632.1 3413794 3415263 R COG3409 Putative peptidoglycan-binding domain-containing protein; general secretory pathway component, cryptic complement(3413794..3415263) Escherichia coli UM146 12701809 YP_006112175.1 CDS UM146_16530 NC_017632.1 3415443 3416258 D COG3031 Type II secretory pathway, component PulC; general secretion pathway protein C 3415443..3416258 Escherichia coli UM146 12701810 YP_006112176.1 CDS UM146_16535 NC_017632.1 3416230 3418194 D COG1450 Type II secretory pathway, component PulD; general secretory pathway component, cryptic 3416230..3418194 Escherichia coli UM146 12701811 YP_006112177.1 CDS UM146_16540 NC_017632.1 3418204 3419685 D COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; general secretory pathway component, cryptic 3418204..3419685 Escherichia coli UM146 12701812 YP_006112178.1 CDS UM146_16545 NC_017632.1 3419682 3420878 D COG1459 Type II secretory pathway, component PulF; general secretory pathway component, cryptic 3419682..3420878 Escherichia coli UM146 12701813 YP_006112179.1 CDS UM146_16550 NC_017632.1 3420888 3421325 D COG2165 Type II secretory pathway, pseudopilin PulG; pseudopilin, cryptic, general secretion pathway 3420888..3421325 Escherichia coli UM146 12701814 YP_006112180.1 CDS UM146_16555 NC_017632.1 3421333 3421842 D COG2165 Type II secretory pathway, pseudopilin PulG; putative general secretory pathway component, cryptic 3421333..3421842 Escherichia coli UM146 12701815 YP_006112181.1 CDS UM146_16560 NC_017632.1 3421839 3422252 D COG2165 Type II secretory pathway, pseudopilin PulG; putative general secretion pathway protein I precursor 3421839..3422252 Escherichia coli UM146 12701816 YP_006112182.1 CDS UM146_16565 NC_017632.1 3422245 3422832 D COG4795 Type II secretory pathway, component PulJ; putative general secretory pathway component, cryptic 3422245..3422832 Escherichia coli UM146 12701817 YP_006112183.1 CDS UM146_16570 NC_017632.1 3422825 3423808 D COG3156 Type II secretory pathway, component PulK; general secretion pathway protein K 3422825..3423808 Escherichia coli UM146 12701818 YP_006112184.1 CDS UM146_16575 NC_017632.1 3423823 3424986 D COG3297 Type II secretory pathway, component PulL; general secretion pathway protein L 3423823..3424986 Escherichia coli UM146 12701819 YP_006112185.1 CDS UM146_16580 NC_017632.1 3424983 3425444 D general secretory pathway component, cryptic 3424983..3425444 Escherichia coli UM146 12701820 YP_006112186.1 CDS UM146_16585 NC_017632.1 3425444 3426121 D COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; bifunctional prepilin leader peptidase and methylase 3425444..3426121 Escherichia coli UM146 12701821 YP_006112187.1 CDS UM146_16590 NC_017632.1 3426150 3426626 R COG2193 Bacterioferritin (cytochrome b1); bacterioferritin complement(3426150..3426626) Escherichia coli UM146 12701822 YP_006112188.1 CDS UM146_16595 NC_017632.1 3426698 3426892 R COG2906 Bacterioferritin-associated ferredoxin; bacterioferritin-associated ferredoxin complement(3426698..3426892) Escherichia coli UM146 12701823 YP_006112189.1 CDS UM146_16600 NC_017632.1 3427061 3429763 R COG3979 Uncharacterized protein contain chitin-binding domain type 3; periplasmic endochitinase complement(3427061..3429763) Escherichia coli UM146 12701824 YP_006112190.1 CDS UM146_16605 NC_017632.1 3430055 3431239 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(3430055..3431239) Escherichia coli UM146 12701825 YP_006112191.1 CDS UM146_16615 NC_017632.1 3432157 3433107 D COG1072 Panthothenate kinase; pantothenate kinase 3432157..3433107 Escherichia coli UM146 12701830 YP_006112192.1 CDS UM146_16620 NC_017632.1 3433136 3434101 R COG1654 Biotin operon repressor; biotin--protein ligase complement(3433136..3434101) Escherichia coli UM146 12701831 YP_006112193.1 CDS murB NC_017632.1 3434098 3435126 R COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(3434098..3435126) Escherichia coli UM146 12701832 YP_006112194.1 CDS purH NC_017632.1 3440891 3442480 D COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3440891..3442480 Escherichia coli UM146 12701837 YP_006112195.1 CDS UM146_16635 NC_017632.1 3442492 3443781 D COG0151 Phosphoribosylamine-glycine ligase; phosphoribosylamine--glycine ligase 3442492..3443781 Escherichia coli UM146 12701838 YP_006112196.1 CDS UM146_16650 NC_017632.1 3445099 3446475 R COG0642 Signal transduction histidine kinase; sensor protein ZraS complement(3445099..3446475) Escherichia coli UM146 12701839 YP_006112197.1 CDS zraP NC_017632.1 3446713 3447132 D COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; zinc resistance protein 3446713..3447132 Escherichia coli UM146 12701840 YP_006112198.1 CDS UM146_16660 NC_017632.1 3447134 3447769 R hypothetical protein complement(3447134..3447769) Escherichia coli UM146 12701841 YP_006112199.1 CDS UM146_16665 NC_017632.1 3447842 3448114 R COG0776 Bacterial nucleoid DNA-binding protein; transcriptional regulator HU subunit alpha complement(3447842..3448114) Escherichia coli UM146 12701842 YP_006112200.1 CDS UM146_16670 NC_017632.1 3448301 3448891 R COG3068 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3448301..3448891) Escherichia coli UM146 12701843 YP_006112201.1 CDS UM146_16675 NC_017632.1 3448934 3449605 R COG1515 Deoxyinosine 3'endonuclease (endonuclease V); endonuclease V complement(3448934..3449605) Escherichia coli UM146 12701844 YP_006112202.1 CDS hemE NC_017632.1 3449615 3450679 R COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase complement(3449615..3450679) Escherichia coli UM146 12701845 YP_006112203.1 CDS nudC NC_017632.1 3450719 3451492 R COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding; NADH pyrophosphatase complement(3450719..3451492) Escherichia coli UM146 12701846 YP_006112204.1 CDS UM146_16690 NC_017632.1 3451587 3452063 D COG3160 Regulator of sigma D; anti-RNA polymerase sigma 70 factor 3451587..3452063 Escherichia coli UM146 12701847 YP_006112205.1 CDS UM146_16695 NC_017632.1 3452296 3454191 D COG0422 Thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 3452296..3454191 Escherichia coli UM146 12701848 YP_006112206.1 CDS UM146_16700 NC_017632.1 3454191 3454826 D COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 3454191..3454826 Escherichia coli UM146 12701849 YP_006112207.1 CDS UM146_16705 NC_017632.1 3454819 3455574 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; thiazole biosynthesis protein ThiF 3454819..3455574 Escherichia coli UM146 12701850 YP_006112208.1 CDS UM146_16710 NC_017632.1 3455558 3455758 D COG2104 Sulfur transfer protein involved in thiamine biosynthesis; sulfur carrier protein ThiS 3455558..3455758 Escherichia coli UM146 12701851 YP_006112209.1 CDS thiG NC_017632.1 3455760 3456530 D COG2022 Uncharacterized enzyme of thiazole biosynthesis; thiazole synthase 3455760..3456530 Escherichia coli UM146 12701852 YP_006112210.1 CDS thiH NC_017632.1 3456527 3457660 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; thiamine biosynthesis protein ThiH 3456527..3457660 Escherichia coli UM146 12701853 YP_006112211.1 CDS UM146_16725 NC_017632.1 3457900 3462123 R COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-directed RNA polymerase subunit beta' complement(3457900..3462123) Escherichia coli UM146 12701854 YP_006112212.1 CDS rpoB NC_017632.1 3462200 3466228 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-directed RNA polymerase subunit beta complement(3462200..3466228) Escherichia coli UM146 12701855 YP_006112213.1 CDS UM146_16735 NC_017632.1 3466548 3466913 R COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(3466548..3466913) Escherichia coli UM146 12701856 YP_006112214.1 CDS rplJ NC_017632.1 3466980 3467477 R COG0244 Ribosomal protein L10; 50S ribosomal protein L10 complement(3466980..3467477) Escherichia coli UM146 12701857 YP_006112215.1 CDS rplA NC_017632.1 3467769 3468473 R COG0081 Ribosomal protein L1; 50S ribosomal protein L1 complement(3467769..3468473) Escherichia coli UM146 12701858 YP_006112216.1 CDS rplK NC_017632.1 3468477 3468905 R COG0080 Ribosomal protein L11; 50S ribosomal protein L11 complement(3468477..3468905) Escherichia coli UM146 12701859 YP_006112217.1 CDS nusG NC_017632.1 3469064 3469609 R COG0250 Transcription antiterminator; transcription antitermination protein NusG complement(3469064..3469609) Escherichia coli UM146 12701860 YP_006112218.1 CDS secE NC_017632.1 3469611 3469994 R COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE complement(3469611..3469994) Escherichia coli UM146 12701861 YP_006112219.1 CDS UM146_16765 NC_017632.1 3470224 3471408 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(3470224..3471408) Escherichia coli UM146 12701862 YP_006112220.1 CDS UM146_16770 NC_017632.1 3471479 3473593 R COG0480 Translation elongation factors (GTPases); elongation factor G complement(3471479..3473593) Escherichia coli UM146 12701863 YP_006112221.1 CDS UM146_16775 NC_017632.1 3473690 3474160 R COG0049 Ribosomal protein S7; 30S ribosomal protein S7 complement(3473690..3474160) Escherichia coli UM146 12701864 YP_006112222.1 CDS rpsL NC_017632.1 3474257 3474631 R COG0048 Ribosomal protein S12; 30S ribosomal protein S12 complement(3474257..3474631) Escherichia coli UM146 12701865 YP_006112223.1 CDS UM146_16785 NC_017632.1 3474757 3475044 R COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur; sulfur transfer complex subunit TusB complement(3474757..3475044) Escherichia coli UM146 12701866 YP_006112224.1 CDS UM146_16790 NC_017632.1 3475051 3475410 R COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur; sulfur relay protein TusC complement(3475051..3475410) Escherichia coli UM146 12701867 YP_006112225.1 CDS UM146_16795 NC_017632.1 3475410 3475796 R COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction; sulfur transfer complex subunit TusD complement(3475410..3475796) Escherichia coli UM146 12701868 YP_006112226.1 CDS UM146_16800 NC_017632.1 3475796 3476518 R COG2964 Uncharacterized protein conserved in bacteria; putative DNA-binding transcriptional regulator complement(3475796..3476518) Escherichia coli UM146 12701869 YP_006112227.1 CDS UM146_16805 NC_017632.1 3476685 3477497 R COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; FKBP-type peptidyl-prolyl cis-trans isomerase complement(3476685..3477497) Escherichia coli UM146 12701870 YP_006112228.1 CDS UM146_16810 NC_017632.1 3477718 3477936 D COG2900 Uncharacterized protein conserved in bacteria; hypothetical protein 3477718..3477936 Escherichia coli UM146 12701871 YP_006112229.1 CDS UM146_16815 NC_017632.1 3477984 3478574 R COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase complement(3477984..3478574) Escherichia coli UM146 12701872 YP_006112230.1 CDS UM146_16820 NC_017632.1 3478669 3478869 R COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain; hypothetical protein complement(3478669..3478869) Escherichia coli UM146 12701873 YP_006112231.1 CDS UM146_16825 NC_017632.1 3478879 3480684 R COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein KefB complement(3478879..3480684) Escherichia coli UM146 12701874 YP_006112232.1 CDS UM146_16830 NC_017632.1 3480684 3481235 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); glutathione-regulated potassium-efflux system ancillary protein KefG complement(3480684..3481235) Escherichia coli UM146 12701875 YP_006112233.1 CDS UM146_16835 NC_017632.1 3481366 3483279 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; putative ABC transporter ATP-binding protein 3481366..3483279 Escherichia coli UM146 12701876 YP_006112234.1 CDS UM146_16840 NC_017632.1 3483279 3484301 D COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; putative hydrolase 3483279..3484301 Escherichia coli UM146 12701877 YP_006112235.1 CDS UM146_16845 NC_017632.1 3484295 3484513 D COG3089 Uncharacterized protein conserved in bacteria; hypothetical protein 3484295..3484513 Escherichia coli UM146 12701878 YP_006112236.1 CDS UM146_16850 NC_017632.1 3484567 3485436 D COG3954 Phosphoribulokinase; phosphoribulokinase 3484567..3485436 Escherichia coli UM146 12701879 YP_006112237.1 CDS UM146_16855 NC_017632.1 3485491 3485895 R COG1765 Predicted redox protein, regulator of disulfide bond formation; hypothetical protein complement(3485491..3485895) Escherichia coli UM146 12701880 YP_006112238.1 CDS UM146_16860 NC_017632.1 3486197 3486829 D COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; cAMP-regulatory protein 3486197..3486829 Escherichia coli UM146 12701881 YP_006112239.1 CDS UM146_16865 NC_017632.1 3486880 3488970 D COG1289 Predicted membrane protein; YccS/YhfK family integral membrane protein 3486880..3488970 Escherichia coli UM146 12701882 YP_006112240.1 CDS UM146_16870 NC_017632.1 3488907 3489026 D hypothetical protein 3488907..3489026 Escherichia coli UM146 12701883 YP_006112241.1 CDS argD NC_017632.1 3489037 3490257 R COG4992 Ornithine/acetylornithine aminotransferase; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein complement(3489037..3490257) Escherichia coli UM146 12701884 YP_006112242.1 CDS UM146_16880 NC_017632.1 3490343 3490906 R COG0512 Anthranilate/para-aminobenzoate synthases component II; para-aminobenzoate synthase component II complement(3490343..3490906) Escherichia coli UM146 12701885 YP_006112243.1 CDS UM146_16885 NC_017632.1 3490938 3491540 R COG2184 Protein involved in cell division; cell filamentation protein Fic complement(3490938..3491540) Escherichia coli UM146 12701886 YP_006112244.1 CDS UM146_16890 NC_017632.1 3491530 3491697 R hypothetical protein complement(3491530..3491697) Escherichia coli UM146 12701887 YP_006112245.1 CDS UM146_16895 NC_017632.1 3491802 3491921 R COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase A complement(3491802..3491921) Escherichia coli UM146 12701888 YP_006112246.1 CDS UM146_16900 NC_017632.1 3491915 3492373 R COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase A complement(3491915..3492373) Escherichia coli UM146 12701889 YP_006112247.1 CDS UM146_16905 NC_017632.1 3492643 3493824 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 3492643..3493824 Escherichia coli UM146 12701890 YP_006112248.1 CDS UM146_16910 NC_017632.1 3494086 3496629 D COG1251 NAD(P)H-nitrite reductase; nitrite reductase [NAD(P)H], large subunit 3494086..3496629 Escherichia coli UM146 12701891 YP_006112249.1 CDS nirD NC_017632.1 3496626 3496952 D COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; nitrite reductase small subunit 3496626..3496952 Escherichia coli UM146 12701892 YP_006112250.1 CDS UM146_16920 NC_017632.1 3497078 3497884 D COG2116 Formate/nitrite family of transporters; nitrite transporter NirC 3497078..3497884 Escherichia coli UM146 12701893 YP_006112251.1 CDS cysG NC_017632.1 3497903 3499276 D COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); siroheme synthase 3497903..3499276 Escherichia coli UM146 12701894 YP_006112252.1 CDS UM146_16930 NC_017632.1 3499528 3499695 D putative lipoprotein 3499528..3499695 Escherichia coli UM146 12701895 YP_006112253.1 CDS UM146_16935 NC_017632.1 3499803 3500888 R hypothetical protein complement(3499803..3500888) Escherichia coli UM146 12701896 YP_006112254.1 CDS UM146_16940 NC_017632.1 3500900 3502204 R hypothetical protein complement(3500900..3502204) Escherichia coli UM146 12701897 YP_006112255.1 CDS UM146_16945 NC_017632.1 3502216 3502569 R COG0698 Ribose 5-phosphate isomerase RpiB; hypothetical protein complement(3502216..3502569) Escherichia coli UM146 12701898 YP_006112256.1 CDS UM146_16950 NC_017632.1 3502580 3503458 R COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold; putative hydrolase complement(3502580..3503458) Escherichia coli UM146 12701899 YP_006112257.1 CDS UM146_16955 NC_017632.1 3503455 3504681 R COG1015 Phosphopentomutase; putative mutase complement(3503455..3504681) Escherichia coli UM146 12701900 YP_006112258.1 CDS UM146_16960 NC_017632.1 3504682 3505845 R COG3457 Predicted amino acid racemase; putative amino acid racemase complement(3504682..3505845) Escherichia coli UM146 12701901 YP_006112259.1 CDS UM146_16965 NC_017632.1 3505929 3506291 R hypothetical protein complement(3505929..3506291) Escherichia coli UM146 12701902 YP_006112260.1 CDS UM146_16970 NC_017632.1 3506308 3507213 R hypothetical protein complement(3506308..3507213) Escherichia coli UM146 12701903 YP_006112261.1 CDS UM146_16975 NC_017632.1 3507373 3508377 R COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(3507373..3508377) Escherichia coli UM146 12701904 YP_006112262.1 CDS UM146_16980 NC_017632.1 3508370 3509128 R COG0546 Predicted phosphatases; phosphoglycolate phosphatase complement(3508370..3509128) Escherichia coli UM146 12701905 YP_006112263.1 CDS UM146_16985 NC_017632.1 3509121 3509798 R COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase complement(3509121..3509798) Escherichia coli UM146 12701906 YP_006112264.1 CDS UM146_16990 NC_017632.1 3509816 3510652 R COG0338 Site-specific DNA methylase; DNA adenine methylase complement(3509816..3510652) Escherichia coli UM146 12701907 YP_006112265.1 CDS UM146_16995 NC_017632.1 3510759 3512045 R COG3266 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3510759..3512045) Escherichia coli UM146 12701908 YP_006112266.1 CDS aroB NC_017632.1 3512137 3513225 R COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase complement(3512137..3513225) Escherichia coli UM146 12701909 YP_006112267.1 CDS aroK NC_017632.1 3513282 3513959 R COG0703 Shikimate kinase; shikimate kinase I complement(3513282..3513959) Escherichia coli UM146 12701910 YP_006112268.1 CDS hofQ NC_017632.1 3514204 3515364 R COG4796 Type II secretory pathway, component HofQ; outer membrane porin HofQ complement(3514204..3515364) Escherichia coli UM146 12701911 YP_006112269.1 CDS UM146_17015 NC_017632.1 3515354 3515758 R hypothetical protein complement(3515354..3515758) Escherichia coli UM146 12701912 YP_006112270.1 CDS UM146_17020 NC_017632.1 3515748 3516188 R hypothetical protein complement(3515748..3516188) Escherichia coli UM146 12701913 YP_006112271.1 CDS UM146_17025 NC_017632.1 3516172 3516711 R putative fimbrial assembly protein complement(3516172..3516711) Escherichia coli UM146 12701914 YP_006112272.1 CDS UM146_17030 NC_017632.1 3516711 3517490 R putative pilus assembly protein complement(3516711..3517490) Escherichia coli UM146 12701915 YP_006112273.1 CDS mrcA NC_017632.1 3517610 3520162 D COG5009 Membrane carboxypeptidase/penicillin-binding protein; peptidoglycan synthetase 3517610..3520162 Escherichia coli UM146 12701916 YP_006112274.1 CDS nudE NC_017632.1 3520328 3520888 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; ADP-ribose diphosphatase NudE complement(3520328..3520888) Escherichia coli UM146 12701917 YP_006112275.1 CDS UM146_17045 NC_017632.1 3521208 3523343 D intracellular growth attenuator protein 3521208..3523343 Escherichia coli UM146 12701918 YP_006112276.1 CDS UM146_17050 NC_017632.1 3523408 3524076 D COG1011 Predicted hydrolase (HAD superfamily); putative hydrolase 3523408..3524076 Escherichia coli UM146 12701919 YP_006112277.1 CDS UM146_17055 NC_017632.1 3524087 3524488 D COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); ribosome-associated heat shock protein Hsp15 3524087..3524488 Escherichia coli UM146 12701920 YP_006112278.1 CDS hslO NC_017632.1 3524507 3525391 D COG1281 Disulfide bond chaperones of the HSP33 family; Hsp33-like chaperonin 3524507..3525391 Escherichia coli UM146 12701921 YP_006112279.1 CDS UM146_17065 NC_017632.1 3525454 3527178 R hypothetical protein complement(3525454..3527178) Escherichia coli UM146 12701922 YP_006112280.1 CDS UM146_17070 NC_017632.1 3527557 3529179 D COG1866 Phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase 3527557..3529179 Escherichia coli UM146 12701923 YP_006112281.1 CDS envZ NC_017632.1 3529255 3530607 R COG0642 Signal transduction histidine kinase; osmolarity sensor protein complement(3529255..3530607) Escherichia coli UM146 12701924 YP_006112282.1 CDS ompR NC_017632.1 3530604 3531323 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; osmolarity response regulator complement(3530604..3531323) Escherichia coli UM146 12701925 YP_006112283.1 CDS greB NC_017632.1 3531551 3532027 D COG0782 Transcription elongation factor; transcription elongation factor GreB 3531551..3532027 Escherichia coli UM146 12701926 YP_006112284.1 CDS UM146_17090 NC_017632.1 3532124 3534445 D COG2183 Transcriptional accessory protein; putative transcriptional accessory protein 3532124..3534445 Escherichia coli UM146 12701927 YP_006112285.1 CDS feoA NC_017632.1 3534885 3535112 D COG1918 Fe2+ transport system protein A; ferrous iron transport protein A 3534885..3535112 Escherichia coli UM146 12701928 YP_006112286.1 CDS feoB NC_017632.1 3535129 3537450 D COG0370 Fe2+ transport system protein B; ferrous iron transport protein B 3535129..3537450 Escherichia coli UM146 12701929 YP_006112287.1 CDS UM146_17105 NC_017632.1 3537461 3537697 D putative DNA-binding transcriptional regulator 3537461..3537697 Escherichia coli UM146 12701930 YP_006112288.1 CDS UM146_17110 NC_017632.1 3537900 3538793 D COG5464 Uncharacterized conserved protein; hypothetical protein 3537900..3538793 Escherichia coli UM146 12701931 YP_006112289.1 CDS UM146_17115 NC_017632.1 3538811 3538909 D hypothetical protein 3538811..3538909 Escherichia coli UM146 12701932 YP_006112290.1 CDS UM146_17120 NC_017632.1 3539013 3539783 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); carboxylesterase BioH complement(3539013..3539783) Escherichia coli UM146 12701933 YP_006112291.1 CDS UM146_17125 NC_017632.1 3539821 3540504 D COG1040 Predicted amidophosphoribosyltransferases; gluconate periplasmic binding protein 3539821..3540504 Escherichia coli UM146 12701934 YP_006112292.1 CDS UM146_17130 NC_017632.1 3540563 3541138 D COG0316 Uncharacterized conserved protein; putative DNA uptake protein 3540563..3541138 Escherichia coli UM146 12701935 YP_006112293.1 CDS UM146_17135 NC_017632.1 3541499 3542815 D COG2610 H+/gluconate symporter and related permeases; High-affinity gluconate transporter 3541499..3542815 Escherichia coli UM146 12701936 YP_006112294.1 CDS malQ NC_017632.1 3542860 3544944 R COG1640 4-alpha-glucanotransferase; 4-alpha-glucanotransferase complement(3542860..3544944) Escherichia coli UM146 12701937 YP_006112295.1 CDS UM146_17145 NC_017632.1 3544954 3547347 R COG0058 Glucan phosphorylase; maltodextrin phosphorylase complement(3544954..3547347) Escherichia coli UM146 12701938 YP_006112296.1 CDS UM146_17150 NC_017632.1 3547970 3550675 D COG2909 ATP-dependent transcriptional regulator; transcriptional regulator MalT 3547970..3550675 Escherichia coli UM146 12701939 YP_006112297.1 CDS UM146_17155 NC_017632.1 3550718 3551737 R COG0430 RNA 3'-terminal phosphate cyclase; RNA 3'-terminal-phosphate cyclase complement(3550718..3551737) Escherichia coli UM146 12701940 YP_006112298.1 CDS UM146_17160 NC_017632.1 3551738 3552964 R COG1690 Uncharacterized conserved protein; hypothetical protein complement(3551738..3552964) Escherichia coli UM146 12701941 YP_006112299.1 CDS UM146_17165 NC_017632.1 3553153 3554751 D COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain; sigma 54-dependent transcriptional regulator of rtcBA expression 3553153..3554751 Escherichia coli UM146 12701942 YP_006112300.1 CDS UM146_17170 NC_017632.1 3554733 3555491 R COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional repressor GlpR complement(3554733..3555491) Escherichia coli UM146 12701943 YP_006112301.1 CDS UM146_17175 NC_017632.1 3555508 3556332 R COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid); intramembrane serine protease GlpG complement(3555508..3556332) Escherichia coli UM146 12701944 YP_006112302.1 CDS glpE NC_017632.1 3556383 3556709 R COG0607 Rhodanese-related sulfurtransferase; thiosulfate sulfurtransferase complement(3556383..3556709) Escherichia coli UM146 12701945 YP_006112303.1 CDS glpD NC_017632.1 3556899 3558404 D COG0578 Glycerol-3-phosphate dehydrogenase; glycerol-3-phosphate dehydrogenase 3556899..3558404 Escherichia coli UM146 12701946 YP_006112304.1 CDS UM146_17190 NC_017632.1 3558458 3559063 R hypothetical protein complement(3558458..3559063) Escherichia coli UM146 12701947 YP_006112305.1 CDS UM146_17195 NC_017632.1 3559066 3559833 R hypothetical protein complement(3559066..3559833) Escherichia coli UM146 12701948 YP_006112306.1 CDS UM146_17200 NC_017632.1 3559836 3560546 R COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; hypothetical protein complement(3559836..3560546) Escherichia coli UM146 12701949 YP_006112307.1 CDS UM146_17215 NC_017632.1 3561854 3562546 R COG3121 P pilus assembly protein, chaperone PapD; putative fimbrial chaperone AufF complement(3561854..3562546) Escherichia coli UM146 12701950 YP_006112308.1 CDS UM146_17220 NC_017632.1 3562599 3563114 R COG3539 P pilus assembly protein, pilin FimA; putative minor fimbrial subunit precursor complement(3562599..3563114) Escherichia coli UM146 12701951 YP_006112309.1 CDS UM146_17225 NC_017632.1 3563122 3563685 R COG3539 P pilus assembly protein, pilin FimA; putative minor fimbrial subunit AufD complement(3563122..3563685) Escherichia coli UM146 12701952 YP_006112310.1 CDS UM146_17230 NC_017632.1 3563685 3566279 R COG3188 P pilus assembly protein, porin PapC; putative outer membrane export usher protein AufC complement(3563685..3566279) Escherichia coli UM146 12701953 YP_006112311.1 CDS UM146_17235 NC_017632.1 3566316 3566732 R COG3121 P pilus assembly protein, chaperone PapD; putative fimbrial chaperone AufB complement(3566316..3566732) Escherichia coli UM146 12701954 YP_006112312.1 CDS UM146_17240 NC_017632.1 3567168 3567872 R COG3539 P pilus assembly protein, pilin FimA; Auf fimbriae major fimbrial subunit AufA complement(3567168..3567872) Escherichia coli UM146 12701955 YP_006112313.1 CDS UM146_17245 NC_017632.1 3568366 3570813 R COG0058 Glucan phosphorylase; glycogen phosphorylase complement(3568366..3570813) Escherichia coli UM146 12701956 YP_006112314.1 CDS glgA NC_017632.1 3570832 3572265 R COG0297 Glycogen synthase; glycogen synthase complement(3570832..3572265) Escherichia coli UM146 12701957 YP_006112315.1 CDS glgC NC_017632.1 3572265 3573560 R COG0448 ADP-glucose pyrophosphorylase; glucose-1-phosphate adenylyltransferase complement(3572265..3573560) Escherichia coli UM146 12701958 YP_006112316.1 CDS UM146_17260 NC_017632.1 3573578 3575551 R COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; glycogen debranching protein complement(3573578..3575551) Escherichia coli UM146 12701959 YP_006112317.1 CDS UM146_17265 NC_017632.1 3575548 3577734 R COG0296 1,4-alpha-glucan branching enzyme; glycogen branching protein complement(3575548..3577734) Escherichia coli UM146 12701960 YP_006112318.1 CDS UM146_17270 NC_017632.1 3578007 3579110 R COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(3578007..3579110) Escherichia coli UM146 12701961 YP_006112319.1 CDS UM146_17275 NC_017632.1 3579302 3579895 D COG2095 Multiple antibiotic transporter; putative dITP- and XTP- hydrolase 3579302..3579895 Escherichia coli UM146 12701962 YP_006112320.1 CDS UM146_17280 NC_017632.1 3579952 3581292 R COG2610 H+/gluconate symporter and related permeases; low affinity gluconate transporter complement(3579952..3581292) Escherichia coli UM146 12701963 YP_006112321.1 CDS gntK NC_017632.1 3581296 3581784 R COG3265 Gluconate kinase; gluconate kinase complement(3581296..3581784) Escherichia coli UM146 12701964 YP_006112322.1 CDS UM146_17290 NC_017632.1 3581962 3582957 R COG1609 Transcriptional regulators; DNA-binding transcriptional repressor complement(3581962..3582957) Escherichia coli UM146 12701965 YP_006112323.1 CDS UM146_17295 NC_017632.1 3583050 3583745 R COG1741 Pirin-related protein; protein YhhW complement(3583050..3583745) Escherichia coli UM146 12701966 YP_006112324.1 CDS UM146_17300 NC_017632.1 3583868 3584905 R COG0673 Predicted dehydrogenases and related proteins; putative dehydrogenase complement(3583868..3584905) Escherichia coli UM146 12701967 YP_006112325.1 CDS UM146_17305 NC_017632.1 3585238 3585726 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase YhhY 3585238..3585726 Escherichia coli UM146 12701968 YP_006112326.1 CDS UM146_17310 NC_017632.1 3585962 3586762 D COG3157 Hemolysin-coregulated protein (uncharacterized); hypothetical protein 3585962..3586762 Escherichia coli UM146 12701969 YP_006112327.1 CDS UM146_17315 NC_017632.1 3587137 3587631 D hypothetical protein 3587137..3587631 Escherichia coli UM146 12701970 YP_006112328.1 CDS UM146_17320 NC_017632.1 3588081 3588365 D hypothetical protein 3588081..3588365 Escherichia coli UM146 12701971 YP_006112329.1 CDS ggt NC_017632.1 3588403 3590136 R COG0405 Gamma-glutamyltransferase; gamma-glutamyltranspeptidase complement(3588403..3590136) Escherichia coli UM146 12701972 YP_006112330.1 CDS UM146_17330 NC_017632.1 3590256 3590696 D hypothetical protein 3590256..3590696 Escherichia coli UM146 12701973 YP_006112331.1 CDS ugpQ NC_017632.1 3590683 3591426 R COG0584 Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase complement(3590683..3591426) Escherichia coli UM146 12701974 YP_006112332.1 CDS ugpC NC_017632.1 3591423 3592493 R COG3839 ABC-type sugar transport systems, ATPase components; glycerol-3-phosphate transporter ATP-binding subunit complement(3591423..3592493) Escherichia coli UM146 12701975 YP_006112333.1 CDS UM146_17345 NC_017632.1 3592495 3593340 R COG0395 ABC-type sugar transport system, permease component; glycerol-3-phosphate transporter membrane protein complement(3592495..3593340) Escherichia coli UM146 12701976 YP_006112334.1 CDS UM146_17350 NC_017632.1 3593337 3594224 R COG1175 ABC-type sugar transport systems, permease components; glycerol-3-phosphate transporter permease complement(3593337..3594224) Escherichia coli UM146 12701977 YP_006112335.1 CDS UM146_17355 NC_017632.1 3594322 3595638 R COG1653 ABC-type sugar transport system, periplasmic component; glycerol-3-phosphate transporter periplasmic binding protein complement(3594322..3595638) Escherichia coli UM146 12701978 YP_006112336.1 CDS livF NC_017632.1 3596035 3596748 R COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; leucine/isoleucine/valine transporter ATP-binding subunit complement(3596035..3596748) Escherichia coli UM146 12701979 YP_006112337.1 CDS livG NC_017632.1 3596750 3597517 R COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; leucine/isoleucine/valine transporter ATP-binding subunit complement(3596750..3597517) Escherichia coli UM146 12701980 YP_006112338.1 CDS livM NC_017632.1 3597514 3598791 R COG4177 ABC-type branched-chain amino acid transport system, permease component; leucine/isoleucine/valine transporter permease subunit complement(3597514..3598791) Escherichia coli UM146 12701981 YP_006112339.1 CDS UM146_17375 NC_017632.1 3598788 3599714 R COG0559 Branched-chain amino acid ABC-type transport system, permease components; branched-chain amino acid transporter permease subunit LivH complement(3598788..3599714) Escherichia coli UM146 12701982 YP_006112340.1 CDS UM146_17380 NC_017632.1 3599762 3600871 R COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; leucine transporter subunit ; periplasmic-binding component of ABC superfamily protein complement(3599762..3600871) Escherichia coli UM146 12701983 YP_006112341.1 CDS UM146_17385 NC_017632.1 3601295 3601678 D hypothetical protein 3601295..3601678 Escherichia coli UM146 12701984 YP_006112342.1 CDS UM146_17390 NC_017632.1 3601688 3601810 D hypothetical protein 3601688..3601810 Escherichia coli UM146 12701985 YP_006112343.1 CDS UM146_17395 NC_017632.1 3601866 3602969 R COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; High-affinity amino acid transport protein, periplasmic binding protein complement(3601866..3602969) Escherichia coli UM146 12701986 YP_006112344.1 CDS UM146_17400 NC_017632.1 3603904 3604305 D COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; PTS system mannose/fructose-specific transporter subunit IIA 3603904..3604305 Escherichia coli UM146 12701987 YP_006112345.1 CDS UM146_17405 NC_017632.1 3604312 3604797 D COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; PTS system mannose/fructose-specific transporter subunit IIA 3604312..3604797 Escherichia coli UM146 12701988 YP_006112346.1 CDS UM146_17410 NC_017632.1 3604814 3605560 D COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; putative phosphotransferase system enzyme IIC 3604814..3605560 Escherichia coli UM146 12701989 YP_006112347.1 CDS UM146_17415 NC_017632.1 3605553 3606407 D COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; putative phosphotransferase system enzyme IID 3605553..3606407 Escherichia coli UM146 12701990 YP_006112348.1 CDS UM146_17420 NC_017632.1 3606442 3607329 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; putative Phosphoglycerate dehydrogenase 3606442..3607329 Escherichia coli UM146 12701991 YP_006112349.1 CDS UM146_17425 NC_017632.1 3607329 3608213 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase 3607329..3608213 Escherichia coli UM146 12701992 YP_006112350.1 CDS UM146_17430 NC_017632.1 3608317 3609171 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase factor sigma-32 complement(3608317..3609171) Escherichia coli UM146 12701993 YP_006112351.1 CDS ftsX NC_017632.1 3609416 3610474 R COG2177 Cell division protein; cell division protein FtsX complement(3609416..3610474) Escherichia coli UM146 12701994 YP_006112352.1 CDS UM146_17440 NC_017632.1 3610467 3611135 R COG2884 Predicted ATPase involved in cell division; cell division protein FtsE complement(3610467..3611135) Escherichia coli UM146 12701995 YP_006112353.1 CDS UM146_17445 NC_017632.1 3611138 3612634 R COG0552 Signal recognition particle GTPase; cell division protein FtsY complement(3611138..3612634) Escherichia coli UM146 12701996 YP_006112354.1 CDS rsmD NC_017632.1 3612784 3613380 D COG0742 N6-adenine-specific methylase; 16S rRNA m(2)G966-methyltransferase 3612784..3613380 Escherichia coli UM146 12701997 YP_006112355.1 CDS UM146_17455 NC_017632.1 3613370 3613639 D COG3776 Predicted membrane protein; hypothetical protein 3613370..3613639 Escherichia coli UM146 12701998 YP_006112356.1 CDS UM146_17460 NC_017632.1 3613642 3614001 R hypothetical protein complement(3613642..3614001) Escherichia coli UM146 12701999 YP_006112357.1 CDS UM146_17465 NC_017632.1 3614142 3614768 D COG3714 Predicted membrane protein; hypothetical protein 3614142..3614768 Escherichia coli UM146 12702000 YP_006112358.1 CDS zntA NC_017632.1 3614842 3617040 D COG2217 Cation transport ATPase; zinc/cadmium/mercury/lead-transporting ATPase 3614842..3617040 Escherichia coli UM146 12702001 YP_006112359.1 CDS UM146_17475 NC_017632.1 3617309 3617554 R COG0425 Predicted redox protein, regulator of disulfide bond formation; sulfur transfer protein SirA complement(3617309..3617554) Escherichia coli UM146 12702002 YP_006112360.1 CDS UM146_17480 NC_017632.1 3617775 3618440 D COG1738 Uncharacterized conserved protein; hypothetical protein 3617775..3618440 Escherichia coli UM146 12702003 YP_006112361.1 CDS UM146_17485 NC_017632.1 3618513 3619070 D hypothetical protein 3618513..3619070 Escherichia coli UM146 12702004 YP_006112362.1 CDS UM146_17490 NC_017632.1 3619074 3620291 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(3619074..3620291) Escherichia coli UM146 12702005 YP_006112363.1 CDS UM146_17495 NC_017632.1 3620423 3621472 D COG0628 Predicted permease; inner membrane protein YhhT 3620423..3621472 Escherichia coli UM146 12702006 YP_006112364.1 CDS UM146_17500 NC_017632.1 3621527 3622114 D COG2091 Phosphopantetheinyl transferase; holo-(acyl carrier protein) synthase 2 3621527..3622114 Escherichia coli UM146 12702007 YP_006112365.1 CDS UM146_17505 NC_017632.1 3622225 3623799 D COG0747 ABC-type dipeptide transport system, periplasmic component; nickel transporter subunit ; periplasmic-binding component of ABC superfamily protein 3622225..3623799 Escherichia coli UM146 12702008 YP_006112366.1 CDS UM146_17510 NC_017632.1 3623799 3624743 D COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; nickel transporter permease NikB 3623799..3624743 Escherichia coli UM146 12702009 YP_006112367.1 CDS nikC NC_017632.1 3624740 3625573 D COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; nickel transporter permease NikC 3624740..3625573 Escherichia coli UM146 12702010 YP_006112368.1 CDS nikD NC_017632.1 3625573 3626337 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; nickel transporter ATP-binding protein NikD 3625573..3626337 Escherichia coli UM146 12702011 YP_006112369.1 CDS nikE NC_017632.1 3626334 3627140 D COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; nickel transporter ATP-binding protein NikE 3626334..3627140 Escherichia coli UM146 12702012 YP_006112370.1 CDS UM146_17530 NC_017632.1 3627146 3627547 D COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; nickel responsive regulator 3627146..3627547 Escherichia coli UM146 12702013 YP_006112371.1 CDS UM146_17535 NC_017632.1 3627611 3627706 R hypothetical protein complement(3627611..3627706) Escherichia coli UM146 12702014 YP_006112372.1 CDS UM146_17540 NC_017632.1 3627746 3628492 D COG2188 Transcriptional regulators; putative transcriptional regulator 3627746..3628492 Escherichia coli UM146 12702015 YP_006112373.1 CDS UM146_17545 NC_017632.1 3628517 3628990 D COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); putative phosphotransferase system enzyme subunit IIA 3628517..3628990 Escherichia coli UM146 12702016 YP_006112374.1 CDS UM146_17550 NC_017632.1 3628987 3629268 D COG3414 Phosphotransferase system, galactitol-specific IIB component; putative phosphotransferase system enzyme IIB 3628987..3629268 Escherichia coli UM146 12702017 YP_006112375.1 CDS UM146_17555 NC_017632.1 3629345 3630703 D COG3775 Phosphotransferase system, galactitol-specific IIC component; putative phosphotransferase system permease component IIC 3629345..3630703 Escherichia coli UM146 12702018 YP_006112376.1 CDS UM146_17560 NC_017632.1 3630696 3632204 D COG1070 Sugar (pentulose and hexulose) kinases; putative carbohydrate kinase 3630696..3632204 Escherichia coli UM146 12702019 YP_006112377.1 CDS UM146_17565 NC_017632.1 3632194 3632463 D COG1925 Phosphotransferase system, HPr-related proteins; putative phosphocarrier HPr protein of a carbohydrate phosphotransferase system 3632194..3632463 Escherichia coli UM146 12702020 YP_006112378.1 CDS gatY NC_017632.1 3632495 3633346 D COG0191 Fructose/tagatose bisphosphate aldolase; putative fructose-1,6-bisphosphate aldolase 3632495..3633346 Escherichia coli UM146 12702021 YP_006112379.1 CDS UM146_17575 NC_017632.1 3633456 3634580 R COG0842 ABC-type multidrug transport system, permease component; putative transport protein complement(3633456..3634580) Escherichia coli UM146 12702022 YP_006112380.1 CDS UM146_17580 NC_017632.1 3634580 3637315 R COG1131 ABC-type multidrug transport system, ATPase component; fused ribosome-associated ATPase: ATP-binding protein ; ATP-binding protein ; putative membrane protein complement(3634580..3637315) Escherichia coli UM146 12702023 YP_006112381.1 CDS UM146_17585 NC_017632.1 3637312 3638379 R COG0845 Membrane-fusion protein; hypothetical protein complement(3637312..3638379) Escherichia coli UM146 12702024 YP_006112382.1 CDS UM146_17590 NC_017632.1 3639101 3640165 D hypothetical protein 3639101..3640165 Escherichia coli UM146 12702025 YP_006112383.1 CDS UM146_17595 NC_017632.1 3640252 3641445 R COG2081 Predicted flavoproteins; putative oxidoreductase with FAD/NAD(P)-binding domain complement(3640252..3641445) Escherichia coli UM146 12702026 YP_006112384.1 CDS UM146_17600 NC_017632.1 3641677 3643176 D COG0306 Phosphate/sulphate permeases; Low-affinity inorganic phosphate transporter 1 3641677..3643176 Escherichia coli UM146 12702027 YP_006112385.1 CDS UM146_17605 NC_017632.1 3643247 3643582 R universal stress protein UspB complement(3643247..3643582) Escherichia coli UM146 12702028 YP_006112386.1 CDS UM146_17610 NC_017632.1 3643973 3644407 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein A 3643973..3644407 Escherichia coli UM146 12702029 YP_006112387.1 CDS UM146_17615 NC_017632.1 3644724 3646193 D COG3104 Dipeptide/tripeptide permease; inner membrane transporter YhiP 3644724..3646193 Escherichia coli UM146 12702030 YP_006112388.1 CDS UM146_17620 NC_017632.1 3646242 3646994 R COG0500 SAM-dependent methyltransferases; putative methyltransferase complement(3646242..3646994) Escherichia coli UM146 12702031 YP_006112389.1 CDS UM146_17625 NC_017632.1 3647002 3649044 R COG0339 Zn-dependent oligopeptidases; oligopeptidase A complement(3647002..3649044) Escherichia coli UM146 12702032 YP_006112390.1 CDS UM146_17630 NC_017632.1 3649247 3650089 D COG2961 Protein involved in catabolism of external DNA; putative DNA processing protein 3649247..3650089 Escherichia coli UM146 12702033 YP_006112391.1 CDS UM146_17635 NC_017632.1 3650161 3651513 D COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; glutathione reductase 3650161..3651513 Escherichia coli UM146 12702034 YP_006112392.1 CDS UM146_17640 NC_017632.1 3652183 3652608 D COG1393 Arsenate reductase and related proteins, glutaredoxin family; arsenate reductase 3652183..3652608 Escherichia coli UM146 12702035 YP_006112393.1 CDS UM146_17645 NC_017632.1 3653792 3654358 D COG3065 Starvation-inducible outer membrane lipoprotein; outer membrane lipoprotein 3653792..3654358 Escherichia coli UM146 12702036 YP_006112394.1 CDS UM146_17650 NC_017632.1 3654511 3655041 D COG0055 F0F1-type ATP synthase, beta subunit; putative DNA-binding transcriptional regulator 3654511..3655041 Escherichia coli UM146 12702037 YP_006112395.1 CDS UM146_17655 NC_017632.1 3655098 3656126 R COG3720 Putative heme degradation protein; hemin transport protein complement(3655098..3656126) Escherichia coli UM146 12702038 YP_006112396.1 CDS UM146_17660 NC_017632.1 3656175 3658157 R COG1629 Outer membrane receptor proteins, mostly Fe transport; outer membrane hemin receptor complement(3656175..3658157) Escherichia coli UM146 12702039 YP_006112397.1 CDS UM146_17665 NC_017632.1 3658922 3659755 D COG4558 ABC-type hemin transport system, periplasmic component; putative periplasmic binding protein 3658922..3659755 Escherichia coli UM146 12702040 YP_006112398.1 CDS UM146_17670 NC_017632.1 3659775 3661112 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 3659775..3661112 Escherichia coli UM146 12702041 YP_006112399.1 CDS UM146_17675 NC_017632.1 3661125 3661619 D COG3721 Putative heme iron utilization protein; hypothetical protein 3661125..3661619 Escherichia coli UM146 12702042 YP_006112400.1 CDS UM146_17680 NC_017632.1 3661619 3662242 D COG0702 Predicted nucleoside-diphosphate-sugar epimerases; hypothetical protein 3661619..3662242 Escherichia coli UM146 12702043 YP_006112401.1 CDS UM146_17685 NC_017632.1 3662327 3663283 D COG0609 ABC-type Fe3+-siderophore transport system, permease component; putative hemin transport system permease 3662327..3663283 Escherichia coli UM146 12702044 YP_006112402.1 CDS hmuV NC_017632.1 3663280 3664050 D COG4559 ABC-type hemin transport system, ATPase component; hemin importer ATP-binding subunit 3663280..3664050 Escherichia coli UM146 12702045 YP_006112403.1 CDS UM146_17695 NC_017632.1 3664102 3664749 R COG1285 Uncharacterized membrane protein; putative Mg(2+) transport ATPase complement(3664102..3664749) Escherichia coli UM146 12702046 YP_006112404.1 CDS hdeB NC_017632.1 3664813 3665139 R acid-resistance protein complement(3664813..3665139) Escherichia coli UM146 12702047 YP_006112405.1 CDS UM146_17705 NC_017632.1 3665255 3665587 R acid-resistance protein complement(3665255..3665587) Escherichia coli UM146 12702048 YP_006112406.1 CDS UM146_17710 NC_017632.1 3665842 3666414 D COG3247 Uncharacterized conserved protein; acid-resistance membrane protein 3665842..3666414 Escherichia coli UM146 12702049 YP_006112407.1 CDS UM146_17715 NC_017632.1 3667213 3667740 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; putative DNA-binding transcriptional activator 3667213..3667740 Escherichia coli UM146 12702050 YP_006112408.1 CDS UM146_17720 NC_017632.1 3668079 3669236 D COG0845 Membrane-fusion protein; multidrug efflux system protein MdtE 3668079..3669236 Escherichia coli UM146 12702051 YP_006112409.1 CDS UM146_17725 NC_017632.1 3669261 3672374 D COG0841 Cation/multidrug efflux pump; multidrug transporter, RpoS-dependent 3669261..3672374 Escherichia coli UM146 12702052 YP_006112410.1 CDS UM146_17730 NC_017632.1 3672737 3673465 R COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator complement(3672737..3673465) Escherichia coli UM146 12702053 YP_006112411.1 CDS UM146_17735 NC_017632.1 3673834 3674658 R COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator GadX complement(3673834..3674658) Escherichia coli UM146 12702054 YP_006112412.1 CDS UM146_17740 NC_017632.1 3675026 3676426 R COG0076 Glutamate decarboxylase and related PLP-dependent proteins; glutamate decarboxylase complement(3675026..3676426) Escherichia coli UM146 12702055 YP_006112413.1 CDS UM146_17745 NC_017632.1 3676637 3678034 R COG1858 Cytochrome c peroxidase; cytochrome C peroxidase complement(3676637..3678034) Escherichia coli UM146 12702056 YP_006112414.1 CDS treF NC_017632.1 3678439 3680088 D COG1626 Neutral trehalase; trehalase 3678439..3680088 Escherichia coli UM146 12702057 YP_006112415.1 CDS UM146_17755 NC_017632.1 3680139 3680741 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; putative DNA-binding response regulator in two-component regulatory system complement(3680139..3680741) Escherichia coli UM146 12702058 YP_006112416.1 CDS UM146_17760 NC_017632.1 3681189 3682160 D COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 3681189..3682160 Escherichia coli UM146 12702059 YP_006112417.1 CDS UM146_17765 NC_017632.1 3682209 3683222 D COG1295 Predicted membrane protein; putative ribonuclease 3682209..3683222 Escherichia coli UM146 12702060 YP_006112418.1 CDS UM146_17770 NC_017632.1 3683615 3684937 D COG0477 Permeases of the major facilitator superfamily; putative transporter 3683615..3684937 Escherichia coli UM146 12702061 YP_006112419.1 CDS UM146_17775 NC_017632.1 3684978 3687038 R COG2982 Uncharacterized protein involved in outer membrane biogenesis; putative outer membrane biogenesis protein complement(3684978..3687038) Escherichia coli UM146 12702062 YP_006112420.1 CDS UM146_17780 NC_017632.1 3687108 3687875 R COG2200 FOG: EAL domain; EAL domain-containing protein complement(3687108..3687875) Escherichia coli UM146 12702063 YP_006112421.1 CDS UM146_17785 NC_017632.1 3688107 3689036 D COG0524 Sugar kinases, ribokinase family; 2-dehydro-3-deoxygluconokinase 3688107..3689036 Escherichia coli UM146 12702064 YP_006112422.1 CDS UM146_17790 NC_017632.1 3689132 3690628 R COG0612 Predicted Zn-dependent peptidases; putative Zn-dependent peptidase complement(3689132..3690628) Escherichia coli UM146 12702065 YP_006112423.1 CDS UM146_17795 NC_017632.1 3690848 3692134 R COG1301 Na+/H+-dicarboxylate symporters; C4-dicarboxylate transporter DctA complement(3690848..3692134) Escherichia coli UM146 12702066 YP_006112424.1 CDS UM146_17800 NC_017632.1 3692317 3694266 R COG2199 FOG: GGDEF domain; putative phosphodiesterase complement(3692317..3694266) Escherichia coli UM146 12702067 YP_006112425.1 CDS UM146_17805 NC_017632.1 3694387 3697860 R COG0457 FOG: TPR repeat; cellulose synthase subunit BcsC complement(3694387..3697860) Escherichia coli UM146 12702068 YP_006112426.1 CDS UM146_17810 NC_017632.1 3697842 3698948 R COG3405 Endoglucanase Y; endo-1,4-D-glucanase complement(3697842..3698948) Escherichia coli UM146 12702069 YP_006112427.1 CDS UM146_17815 NC_017632.1 3698955 3701231 R cellulose synthase regulator protein complement(3698955..3701231) Escherichia coli UM146 12702070 YP_006112428.1 CDS bcsA NC_017632.1 3701305 3703923 R COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; cellulose synthase catalytic subunit complement(3701305..3703923) Escherichia coli UM146 12702071 YP_006112429.1 CDS UM146_17825 NC_017632.1 3703920 3704672 R COG1192 ATPases involved in chromosome partitioning; cell division protein complement(3703920..3704672) Escherichia coli UM146 12702072 YP_006112430.1 CDS UM146_17830 NC_017632.1 3704684 3704872 R hypothetical protein complement(3704684..3704872) Escherichia coli UM146 12702073 YP_006112431.1 CDS UM146_17835 NC_017632.1 3705211 3706716 D cellulose biosynthesis protein BcsE 3705211..3706716 Escherichia coli UM146 12702074 YP_006112432.1 CDS UM146_17840 NC_017632.1 3706713 3706904 D hypothetical protein 3706713..3706904 Escherichia coli UM146 12702075 YP_006112433.1 CDS UM146_17845 NC_017632.1 3706901 3708580 D putative cellulose biosynthesis endoglucanase 3706901..3708580 Escherichia coli UM146 12702076 YP_006112434.1 CDS UM146_17850 NC_017632.1 3708666 3708773 R toxic polypeptide, small complement(3708666..3708773) Escherichia coli UM146 12702077 YP_006112435.1 CDS UM146_17855 NC_017632.1 3709149 3709256 R toxic polypeptide, small complement(3709149..3709256) Escherichia coli UM146 12702078 YP_006112436.1 CDS UM146_17860 NC_017632.1 3709631 3709738 R toxic polypeptide, small complement(3709631..3709738) Escherichia coli UM146 12702079 YP_006112437.1 CDS UM146_17865 NC_017632.1 3710214 3711485 D COG0814 Amino acid permeases; transporter 3710214..3711485 Escherichia coli UM146 12702080 YP_006112438.1 CDS dppF NC_017632.1 3711515 3712519 R COG4608 ABC-type oligopeptide transport system, ATPase component; dipeptide transporter ATP-binding subunit complement(3711515..3712519) Escherichia coli UM146 12702081 YP_006112439.1 CDS dppD NC_017632.1 3712516 3713499 R COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; dipeptide transporter ATP-binding subunit complement(3712516..3713499) Escherichia coli UM146 12702082 YP_006112440.1 CDS UM146_17880 NC_017632.1 3713510 3714412 R COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide transporter complement(3713510..3714412) Escherichia coli UM146 12702083 YP_006112441.1 CDS UM146_17885 NC_017632.1 3714422 3715441 R COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide transporter permease DppB complement(3714422..3715441) Escherichia coli UM146 12702084 YP_006112442.1 CDS UM146_17890 NC_017632.1 3715592 3717199 R COG0747 ABC-type dipeptide transport system, periplasmic component; dipeptide transporter ; periplasmic-binding component of ABC superfamily protein complement(3715592..3717199) Escherichia coli UM146 12702085 YP_006112443.1 CDS UM146_17895 NC_017632.1 3717551 3717814 R hypothetical protein complement(3717551..3717814) Escherichia coli UM146 12702086 YP_006112444.1 CDS UM146_17900 NC_017632.1 3718108 3719799 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; phosphoethanolamine transferase complement(3718108..3719799) Escherichia coli UM146 12702088 YP_006112445.1 CDS UM146_17905 NC_017632.1 3720123 3721331 R COG0477 Permeases of the major facilitator superfamily; putative transporter complement(3720123..3721331) Escherichia coli UM146 12702089 YP_006112446.1 CDS UM146_17910 NC_017632.1 3721560 3722258 R hypothetical protein complement(3721560..3722258) Escherichia coli UM146 12702090 YP_006112447.1 CDS UM146_17915 NC_017632.1 3722416 3722979 D COG2818 3-methyladenine DNA glycosylase; 3-methyladenine DNA glycosylase 3722416..3722979 Escherichia coli UM146 12702091 YP_006112448.1 CDS UM146_17920 NC_017632.1 3722976 3723416 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein 3722976..3723416 Escherichia coli UM146 12702092 YP_006112449.1 CDS UM146_17925 NC_017632.1 3723385 3725664 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; biotin sulfoxide reductase complement(3723385..3725664) Escherichia coli UM146 12702093 YP_006112450.1 CDS UM146_17930 NC_017632.1 3725871 3726530 D COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; putative outer membrane lipoprotein 3725871..3726530 Escherichia coli UM146 12702094 YP_006112451.1 CDS UM146_17935 NC_017632.1 3726634 3727608 D COG1052 Lactate dehydrogenase and related dehydrogenases; 2-ketoaldonate reductase/glyoxylate reductase B 3726634..3727608 Escherichia coli UM146 12702095 YP_006112452.1 CDS UM146_17940 NC_017632.1 3727658 3728368 R hypothetical protein complement(3727658..3728368) Escherichia coli UM146 12702096 YP_006112453.1 CDS UM146_17945 NC_017632.1 3728802 3729092 D COG2944 Predicted transcriptional regulator; putative transcriptional regulator 3728802..3729092 Escherichia coli UM146 12702097 YP_006112454.1 CDS UM146_17950 NC_017632.1 3729373 3729585 D COG1278 Cold shock proteins; major cold shock protein 3729373..3729585 Escherichia coli UM146 12702098 YP_006112455.1 CDS UM146_17955 NC_017632.1 3729773 3729925 R small toxic polypeptide complement(3729773..3729925) Escherichia coli UM146 12702099 YP_006112456.1 CDS glyS NC_017632.1 3730248 3732317 R COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(3730248..3732317) Escherichia coli UM146 12702100 YP_006112457.1 CDS glyQ NC_017632.1 3732327 3733238 R COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase subunit alpha complement(3732327..3733238) Escherichia coli UM146 12702101 YP_006112458.1 CDS UM146_17970 NC_017632.1 3733333 3733632 R hypothetical protein complement(3733333..3733632) Escherichia coli UM146 12702102 YP_006112459.1 CDS UM146_17975 NC_017632.1 3733807 3734802 D COG3274 Uncharacterized protein conserved in bacteria; acyltransferase 3 3733807..3734802 Escherichia coli UM146 12702103 YP_006112460.1 CDS UM146_17980 NC_017632.1 3734844 3735281 R COG4682 Predicted membrane protein; hypothetical protein complement(3734844..3735281) Escherichia coli UM146 12702104 YP_006112461.1 CDS UM146_17985 NC_017632.1 3735327 3735668 R COG4682 Predicted membrane protein; hypothetical protein complement(3735327..3735668) Escherichia coli UM146 12702105 YP_006112462.1 CDS UM146_17990 NC_017632.1 3735837 3737291 R COG1070 Sugar (pentulose and hexulose) kinases; xylulokinase complement(3735837..3737291) Escherichia coli UM146 12702106 YP_006112463.1 CDS UM146_17995 NC_017632.1 3737363 3738685 R COG2115 Xylose isomerase; xylose isomerase complement(3737363..3738685) Escherichia coli UM146 12702107 YP_006112464.1 CDS xylF NC_017632.1 3739051 3740043 D COG4213 ABC-type xylose transport system, periplasmic component; D-xylose transporter subunit XylF 3739051..3740043 Escherichia coli UM146 12702108 YP_006112465.1 CDS UM146_18005 NC_017632.1 3740121 3741662 D COG1129 ABC-type sugar transport system, ATPase component; xylose transporter ATP-binding subunit 3740121..3741662 Escherichia coli UM146 12702109 YP_006112466.1 CDS UM146_18010 NC_017632.1 3741640 3742821 D COG4214 ABC-type xylose transport system, permease component; Xylose transport system permease protein xylH 3741640..3742821 Escherichia coli UM146 12702110 YP_006112467.1 CDS UM146_18015 NC_017632.1 3742899 3744077 D COG1609 Transcriptional regulators; Xylose operon regulatory protein 3742899..3744077 Escherichia coli UM146 12702111 YP_006112468.1 CDS UM146_18020 NC_017632.1 3744185 3744757 R COG2992 Uncharacterized FlgJ-related protein; hypothetical protein complement(3744185..3744757) Escherichia coli UM146 12702112 YP_006112469.1 CDS malS NC_017632.1 3745329 3747359 D COG0366 Glycosidases; periplasmic alpha-amylase 3745329..3747359 Escherichia coli UM146 12702113 YP_006112470.1 CDS avtA NC_017632.1 3747537 3748790 D COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase; valine--pyruvate transaminase 3747537..3748790 Escherichia coli UM146 12702114 YP_006112471.1 CDS UM146_18035 NC_017632.1 3748942 3749415 R COG1142 Fe-S-cluster-containing hydrogenase components 2; putative electron transport protein YsaA complement(3748942..3749415) Escherichia coli UM146 12702115 YP_006112472.1 CDS UM146_18040 NC_017632.1 3749517 3750365 R COG1414 Transcriptional regulator; DNA-binding transcriptional repressor complement(3749517..3750365) Escherichia coli UM146 12702116 YP_006112473.1 CDS UM146_18045 NC_017632.1 3750566 3751564 D COG2055 Malate/L-lactate dehydrogenases; 2,3-diketo-L-gulonate reductase 3750566..3751564 Escherichia coli UM146 12702117 YP_006112474.1 CDS UM146_18050 NC_017632.1 3751576 3752040 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 3751576..3752040 Escherichia coli UM146 12702118 YP_006112475.1 CDS UM146_18055 NC_017632.1 3752063 3752983 D hypothetical protein 3752063..3752983 Escherichia coli UM146 12702119 YP_006112476.1 CDS UM146_18060 NC_017632.1 3753097 3753564 D COG3090 TRAP-type C4-dicarboxylate transport system, small permease component; 2,3-diketo-L-gulonate TRAP transporter small permease 3753097..3753564 Escherichia coli UM146 12702120 YP_006112477.1 CDS UM146_18065 NC_017632.1 3753567 3754844 D COG1593 TRAP-type C4-dicarboxylate transport system, large permease component; DedA family, membrane protein YiaN 3753567..3754844 Escherichia coli UM146 12702121 YP_006112478.1 CDS UM146_18080 NC_017632.1 3755846 3757342 D COG1070 Sugar (pentulose and hexulose) kinases; L-xylulose kinase 3755846..3757342 Escherichia coli UM146 12702122 YP_006112479.1 CDS sgbH NC_017632.1 3757339 3758001 D COG0269 3-hexulose-6-phosphate synthase and related proteins; 3-keto-L-gulonate-6-phosphate decarboxylase 3757339..3758001 Escherichia coli UM146 12702123 YP_006112480.1 CDS UM146_18090 NC_017632.1 3757994 3758854 D COG3623 Putative L-xylulose-5-phosphate 3-epimerase; putative L-xylulose 5-phosphate 3-epimerase 3757994..3758854 Escherichia coli UM146 12702124 YP_006112481.1 CDS sgbE NC_017632.1 3758848 3759543 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase 3758848..3759543 Escherichia coli UM146 12702125 YP_006112482.1 CDS UM146_18100 NC_017632.1 3759590 3761128 R COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase complement(3759590..3761128) Escherichia coli UM146 12702126 YP_006112483.1 CDS UM146_18105 NC_017632.1 3761236 3762531 R COG3177 Uncharacterized conserved protein; hypothetical protein complement(3761236..3762531) Escherichia coli UM146 12702127 YP_006112484.1 CDS UM146_18110 NC_017632.1 3762661 3763812 R COG1454 Alcohol dehydrogenase, class IV; putative alcohol dehydrogenase complement(3762661..3763812) Escherichia coli UM146 12702128 YP_006112485.1 CDS UM146_18115 NC_017632.1 3764003 3765847 R COG3276 Selenocysteine-specific translation elongation factor; selenocysteinyl-tRNA-specific translation factor complement(3764003..3765847) Escherichia coli UM146 12702129 YP_006112486.1 CDS UM146_18120 NC_017632.1 3765844 3767235 R COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase complement(3765844..3767235) Escherichia coli UM146 12702130 YP_006112487.1 CDS UM146_18125 NC_017632.1 3767333 3767941 R COG0625 Glutathione S-transferase; putative glutathione S-transferase complement(3767333..3767941) Escherichia coli UM146 12702131 YP_006112488.1 CDS UM146_18130 NC_017632.1 3768012 3769148 R COG1566 Multidrug resistance efflux pump; hypothetical protein complement(3768012..3769148) Escherichia coli UM146 12702132 YP_006112489.1 CDS UM146_18135 NC_017632.1 3769151 3769513 R hypothetical protein complement(3769151..3769513) Escherichia coli UM146 12702133 YP_006112490.1 CDS UM146_18140 NC_017632.1 3770049 3771962 D COG2213 Phosphotransferase system, mannitol-specific IIBC component; fused mannitol-specific PTS enzymes: IIA components ; IIB components ; IIC components 3770049..3771962 Escherichia coli UM146 12702134 YP_006112491.1 CDS UM146_18145 NC_017632.1 3772281 3773429 D COG0246 Mannitol-1-phosphate/altronate dehydrogenases; mannitol-1-phosphate 5-dehydrogenase 3772281..3773429 Escherichia coli UM146 12702135 YP_006112492.1 CDS mtlR NC_017632.1 3773429 3774016 D COG3722 Transcriptional regulator; mannitol repressor protein 3773429..3774016 Escherichia coli UM146 12702136 YP_006112493.1 CDS UM146_18155 NC_017632.1 3774027 3774236 R hypothetical protein complement(3774027..3774236) Escherichia coli UM146 12702137 YP_006112494.1 CDS UM146_18160 NC_017632.1 3774520 3774882 D hypothetical protein 3774520..3774882 Escherichia coli UM146 12702138 YP_006112495.1 CDS UM146_18175 NC_017632.1 3776167 3780918 D COG5295 Autotransporter adhesin; putative exported adhesin 3776167..3780918 Escherichia coli UM146 12702139 YP_006112496.1 CDS UM146_18180 NC_017632.1 3781328 3782983 D COG1620 L-lactate permease; L-lactate permease 3781328..3782983 Escherichia coli UM146 12702140 YP_006112497.1 CDS UM146_18185 NC_017632.1 3782983 3783759 D COG2186 Transcriptional regulators; DNA-binding transcriptional repressor LldR 3782983..3783759 Escherichia coli UM146 12702141 YP_006112498.1 CDS lldD NC_017632.1 3783756 3784946 D COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; L-lactate dehydrogenase 3783756..3784946 Escherichia coli UM146 12702142 YP_006112499.1 CDS UM146_18195 NC_017632.1 3784994 3785467 D COG0219 Predicted rRNA methylase (SpoU class); putative tRNA/rRNA methyltransferase YibK 3784994..3785467 Escherichia coli UM146 12702143 YP_006112500.1 CDS cysE NC_017632.1 3785522 3786343 R COG1045 Serine acetyltransferase; serine acetyltransferase complement(3785522..3786343) Escherichia coli UM146 12702144 YP_006112501.1 CDS gpsA NC_017632.1 3786423 3787442 R COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(3786423..3787442) Escherichia coli UM146 12702145 YP_006112502.1 CDS UM146_18210 NC_017632.1 3787442 3787909 R COG1952 Preprotein translocase subunit SecB; preprotein translocase subunit SecB complement(3787442..3787909) Escherichia coli UM146 12702146 YP_006112503.1 CDS UM146_18215 NC_017632.1 3787973 3788224 R COG0695 Glutaredoxin and related proteins; glutaredoxin 3 complement(3787973..3788224) Escherichia coli UM146 12702147 YP_006112504.1 CDS UM146_18220 NC_017632.1 3788365 3788796 R COG0607 Rhodanese-related sulfurtransferase; hypothetical protein complement(3788365..3788796) Escherichia coli UM146 12702148 YP_006112505.1 CDS UM146_18225 NC_017632.1 3789041 3790585 D COG0696 Phosphoglyceromutase; phosphoglyceromutase 3789041..3790585 Escherichia coli UM146 12702149 YP_006112506.1 CDS UM146_18230 NC_017632.1 3790619 3791878 D COG4942 Membrane-bound metallopeptidase; hypothetical protein 3790619..3791878 Escherichia coli UM146 12702150 YP_006112507.1 CDS UM146_18235 NC_017632.1 3791882 3792841 D COG2861 Uncharacterized protein conserved in bacteria; putative polysaccharide deacetylase 3791882..3792841 Escherichia coli UM146 12702151 YP_006112508.1 CDS UM146_18240 NC_017632.1 3792828 3793862 R COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyl transferase complement(3792828..3793862) Escherichia coli UM146 12702152 YP_006112509.1 CDS tdh NC_017632.1 3794101 3795126 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; L-threonine 3-dehydrogenase complement(3794101..3795126) Escherichia coli UM146 12702153 YP_006112510.1 CDS UM146_18250 NC_017632.1 3795136 3796332 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 2-amino-3-ketobutyrate coenzyme A ligase complement(3795136..3796332) Escherichia coli UM146 12702154 YP_006112511.1 CDS rfaD NC_017632.1 3796546 3797478 D COG0451 Nucleoside-diphosphate-sugar epimerases; ADP-L-glycero-D-manno-heptose-6-epimerase 3796546..3797478 Escherichia coli UM146 12702155 YP_006112512.1 CDS UM146_18260 NC_017632.1 3797488 3798534 D COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase 3797488..3798534 Escherichia coli UM146 12702156 YP_006112513.1 CDS UM146_18265 NC_017632.1 3798538 3799518 D COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase 3798538..3799518 Escherichia coli UM146 12702157 YP_006112514.1 CDS UM146_18270 NC_017632.1 3799588 3800550 R COG3307 Lipid A core - O-antigen ligase and related enzymes; lipid A-core:surface polymer ligase WaaL complement(3799588..3800550) Escherichia coli UM146 12702158 YP_006112515.1 CDS UM146_18285 NC_017632.1 3801950 3802978 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase complement(3801950..3802978) Escherichia coli UM146 12702159 YP_006112516.1 CDS UM146_18290 NC_017632.1 3803004 3803696 R COG0661 Predicted unusual protein kinase; lipopolysaccharide core biosynthesis protein complement(3803004..3803696) Escherichia coli UM146 12702160 YP_006112517.1 CDS UM146_18295 NC_017632.1 3803706 3804701 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glucosyltransferase complement(3803706..3804701) Escherichia coli UM146 12702161 YP_006112518.1 CDS UM146_18300 NC_017632.1 3804718 3805734 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; UDP-glucose:(Glucosyl) LPS alpha1, 3-glucosyltransferase complement(3804718..3805734) Escherichia coli UM146 12702162 YP_006112519.1 CDS UM146_18305 NC_017632.1 3805750 3806547 R COG0515 Serine/threonine protein kinase; kinase that phosphorylates core heptose of lipopolysaccharide complement(3805750..3806547) Escherichia coli UM146 12702163 YP_006112520.1 CDS UM146_18310 NC_017632.1 3806540 3807664 R COG0438 Glycosyltransferase; glucosyltransferase I RfaG complement(3806540..3807664) Escherichia coli UM146 12702164 YP_006112521.1 CDS UM146_18315 NC_017632.1 3807661 3808683 R COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide core biosynthesis protein complement(3807661..3808683) Escherichia coli UM146 12702165 YP_006112522.1 CDS UM146_18320 NC_017632.1 3809132 3810409 D COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase 3809132..3810409 Escherichia coli UM146 12702166 YP_006112523.1 CDS coaD NC_017632.1 3810417 3810896 D COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase 3810417..3810896 Escherichia coli UM146 12702167 YP_006112524.1 CDS UM146_18330 NC_017632.1 3810935 3811744 R COG0266 Formamidopyrimidine-DNA glycosylase; formamidopyrimidine-DNA glycosylase complement(3810935..3811744) Escherichia coli UM146 12702168 YP_006112525.1 CDS rpmG NC_017632.1 3811842 3812009 R COG0267 Ribosomal protein L33; 50S ribosomal protein L33 complement(3811842..3812009) Escherichia coli UM146 12702169 YP_006112526.1 CDS rpmB NC_017632.1 3812030 3812266 R COG0227 Ribosomal protein L28; 50S ribosomal protein L28 complement(3812030..3812266) Escherichia coli UM146 12702170 YP_006112527.1 CDS radC NC_017632.1 3812483 3813151 R COG2003 DNA repair proteins; DNA repair protein RadC complement(3812483..3813151) Escherichia coli UM146 12702171 YP_006112528.1 CDS UM146_18350 NC_017632.1 3813323 3814543 D COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3813323..3814543 Escherichia coli UM146 12702172 YP_006112529.1 CDS dut NC_017632.1 3814524 3814979 D COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase 3814524..3814979 Escherichia coli UM146 12702173 YP_006112530.1 CDS slmA NC_017632.1 3815086 3815682 D COG1309 Transcriptional regulator; nucleoid occlusion protein 3815086..3815682 Escherichia coli UM146 12702174 YP_006112531.1 CDS pyrE NC_017632.1 3815719 3816360 R COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase complement(3815719..3816360) Escherichia coli UM146 12702175 YP_006112532.1 CDS rph NC_017632.1 3816426 3817142 R COG0689 RNase PH; ribonuclease PH complement(3816426..3817142) Escherichia coli UM146 12702176 YP_006112533.1 CDS UM146_18375 NC_017632.1 3817269 3818132 D COG1561 Uncharacterized stress-induced protein; hypothetical protein 3817269..3818132 Escherichia coli UM146 12702177 YP_006112534.1 CDS dinD NC_017632.1 3818354 3819178 D DNA-damage-inducible protein D 3818354..3819178 Escherichia coli UM146 12702178 YP_006112535.1 CDS UM146_18385 NC_017632.1 3819470 3820087 D COG2860 Predicted membrane protein; hypothetical protein 3819470..3820087 Escherichia coli UM146 12702179 YP_006112536.1 CDS ligB NC_017632.1 3820084 3821766 R COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigB complement(3820084..3821766) Escherichia coli UM146 12702180 YP_006112537.1 CDS gmk NC_017632.1 3822112 3822648 D COG0194 Guanylate kinase; guanylate kinase 3822112..3822648 Escherichia coli UM146 12702181 YP_006112538.1 CDS rpoZ NC_017632.1 3822703 3822978 D COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega 3822703..3822978 Escherichia coli UM146 12702182 YP_006112539.1 CDS UM146_18405 NC_017632.1 3822997 3825105 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3822997..3825105 Escherichia coli UM146 12702183 YP_006112540.1 CDS UM146_18410 NC_017632.1 3825112 3825801 D COG0566 rRNA methylases; tRNA guanosine-2'-O-methyltransferase 3825112..3825801 Escherichia coli UM146 12702184 YP_006112541.1 CDS UM146_18415 NC_017632.1 3825807 3827888 D COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG 3825807..3827888 Escherichia coli UM146 12702185 YP_006112542.1 CDS UM146_18420 NC_017632.1 3827922 3829127 R COG0786 Na+/glutamate symporter; sodium/glutamate symporter complement(3827922..3829127) Escherichia coli UM146 12702186 YP_006112543.1 CDS UM146_18425 NC_017632.1 3829407 3830798 D COG2233 Xanthine/uracil permeases; putative purine transport protein 3829407..3830798 Escherichia coli UM146 12702187 YP_006112544.1 CDS UM146_18430 NC_017632.1 3830919 3832628 D hypothetical protein 3830919..3832628 Escherichia coli UM146 12702188 YP_006112545.1 CDS UM146_18435 NC_017632.1 3832672 3833352 R COG3822 ABC-type sugar transport system, auxiliary component; hypothetical protein complement(3832672..3833352) Escherichia coli UM146 12702189 YP_006112546.1 CDS UM146_18440 NC_017632.1 3833333 3834298 R COG1940 Transcriptional regulator/sugar kinase; putative sugar kinase/transcriptional regulator, ATPase domain protein complement(3833333..3834298) Escherichia coli UM146 12702190 YP_006112547.1 CDS UM146_18445 NC_017632.1 3834313 3835173 R COG0191 Fructose/tagatose bisphosphate aldolase; hypothetical protein complement(3834313..3835173) Escherichia coli UM146 12702191 YP_006112548.1 CDS UM146_18450 NC_017632.1 3835254 3836105 R COG0191 Fructose/tagatose bisphosphate aldolase; putative sugar aldolase complement(3835254..3836105) Escherichia coli UM146 12702192 YP_006112549.1 CDS UM146_18455 NC_017632.1 3836117 3837208 R COG1299 Phosphotransferase system, fructose-specific IIC component; putative PTS enzyme-II fructose complement(3836117..3837208) Escherichia coli UM146 12702193 YP_006112550.1 CDS UM146_18460 NC_017632.1 3837233 3837547 R COG1445 Phosphotransferase system fructose-specific component IIB; putative phosphotransferase system, fructose-specific IIB subunit complement(3837233..3837547) Escherichia coli UM146 12702194 YP_006112551.1 CDS UM146_18465 NC_017632.1 3837565 3838035 R COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); putative phosphotransferase system (PTS), fructose-specific IIA component complement(3837565..3838035) Escherichia coli UM146 12702195 YP_006112552.1 CDS UM146_18470 NC_017632.1 3838062 3839615 R COG3711 Transcriptional antiterminator; putative transcriptional antiterminator complement(3838062..3839615) Escherichia coli UM146 12702196 YP_006112553.1 CDS UM146_18475 NC_017632.1 3839910 3842228 R COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; alpha-xylosidase complement(3839910..3842228) Escherichia coli UM146 12702197 YP_006112554.1 CDS UM146_18480 NC_017632.1 3842238 3843620 R COG2211 Na+/melibiose symporter and related transporters; putative transporter complement(3842238..3843620) Escherichia coli UM146 12702198 YP_006112555.1 CDS UM146_18485 NC_017632.1 3844060 3845097 D COG3943 Virulence protein; hypothetical protein 3844060..3845097 Escherichia coli UM146 12702200 YP_006112556.1 CDS UM146_18490 NC_017632.1 3845446 3845526 D hypothetical protein 3845446..3845526 Escherichia coli UM146 12702201 YP_006112557.1 CDS UM146_18495 NC_017632.1 3845667 3846035 D hypothetical protein 3845667..3846035 Escherichia coli UM146 12702202 YP_006112558.1 CDS UM146_18510 NC_017632.1 3847258 3848076 R COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; hypothetical protein complement(3847258..3848076) Escherichia coli UM146 12702203 YP_006112559.1 CDS UM146_18515 NC_017632.1 3848298 3848591 D hypothetical protein 3848298..3848591 Escherichia coli UM146 12702204 YP_006112560.1 CDS nepI NC_017632.1 3848632 3849987 R COG2814 Arabinose efflux permease; ribonucleoside transporter complement(3848632..3849987) Escherichia coli UM146 12702205 YP_006112561.1 CDS UM146_18525 NC_017632.1 3850033 3850485 R COG0442 Prolyl-tRNA synthetase; hypothetical protein complement(3850033..3850485) Escherichia coli UM146 12702206 YP_006112562.1 CDS UM146_18530 NC_017632.1 3850538 3851872 R COG2252 Permeases; xanthine/uracil permase YicO complement(3850538..3851872) Escherichia coli UM146 12702207 YP_006112563.1 CDS UM146_18535 NC_017632.1 3852047 3853813 D COG1001 Adenine deaminase; cryptic adenine deaminase 3852047..3853813 Escherichia coli UM146 12702208 YP_006112564.1 CDS uhpT NC_017632.1 3853859 3855250 R COG2271 Sugar phosphate permease; sugar phosphate antiporter complement(3853859..3855250) Escherichia coli UM146 12702209 YP_006112565.1 CDS UM146_18545 NC_017632.1 3855388 3856707 R COG2271 Sugar phosphate permease; regulatory protein UhpC complement(3855388..3856707) Escherichia coli UM146 12702210 YP_006112566.1 CDS UM146_18550 NC_017632.1 3856717 3858219 R COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific; sensory histidine kinase UhpB complement(3856717..3858219) Escherichia coli UM146 12702211 YP_006112567.1 CDS UM146_18555 NC_017632.1 3858219 3858809 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; DNA-binding transcriptional activator UhpA complement(3858219..3858809) Escherichia coli UM146 12702212 YP_006112568.1 CDS UM146_18560 NC_017632.1 3858882 3859172 R COG0440 Acetolactate synthase, small (regulatory) subunit; acetolactate synthase 1 regulatory subunit complement(3858882..3859172) Escherichia coli UM146 12702213 YP_006112569.1 CDS UM146_18565 NC_017632.1 3859176 3860864 R COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase catalytic subunit complement(3859176..3860864) Escherichia coli UM146 12702214 YP_006112570.1 CDS emrD NC_017632.1 3861469 3862653 D COG0477 Permeases of the major facilitator superfamily; multidrug resistance protein D 3861469..3862653 Escherichia coli UM146 12702215 YP_006112571.1 CDS UM146_18575 NC_017632.1 3862661 3863158 R COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); putative transcriptional regulator complement(3862661..3863158) Escherichia coli UM146 12702216 YP_006112572.1 CDS UM146_18580 NC_017632.1 3863155 3863517 R inner membrane protein YidG complement(3863155..3863517) Escherichia coli UM146 12702217 YP_006112573.1 CDS UM146_18585 NC_017632.1 3863507 3863854 R COG2149 Predicted membrane protein; inner membrane protein YidH complement(3863507..3863854) Escherichia coli UM146 12702218 YP_006112574.1 CDS UM146_18600 NC_017632.1 3865403 3867118 R COG4146 Predicted symporter; putative symporter YidK complement(3865403..3867118) Escherichia coli UM146 12702219 YP_006112575.1 CDS UM146_18605 NC_017632.1 3867285 3868151 D COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator 3867285..3868151 Escherichia coli UM146 12702220 YP_006112576.1 CDS UM146_18610 NC_017632.1 3868241 3869902 R COG2985 Predicted permease; hypothetical protein complement(3868241..3869902) Escherichia coli UM146 12702221 YP_006112577.1 CDS UM146_18615 NC_017632.1 3869932 3870102 D hypothetical protein 3869932..3870102 Escherichia coli UM146 12702222 YP_006112578.1 CDS UM146_18620 NC_017632.1 3870099 3870527 R COG0071 Molecular chaperone (small heat shock protein); heat shock chaperone IbpB complement(3870099..3870527) Escherichia coli UM146 12702223 YP_006112579.1 CDS UM146_18625 NC_017632.1 3870639 3871052 R COG0071 Molecular chaperone (small heat shock protein); heat shock protein IbpA complement(3870639..3871052) Escherichia coli UM146 12702224 YP_006112580.1 CDS UM146_18630 NC_017632.1 3871430 3871690 D COG5645 Predicted periplasmic lipoprotein; hypothetical protein 3871430..3871690 Escherichia coli UM146 12702225 YP_006112581.1 CDS UM146_18635 NC_017632.1 3871694 3872908 R COG0823 Periplasmic component of the Tol biopolymer transport system; hypothetical protein complement(3871694..3872908) Escherichia coli UM146 12702226 YP_006112582.1 CDS UM146_18640 NC_017632.1 3873009 3874109 D COG0644 Dehydrogenases (flavoproteins); putative oxidoreductase 3873009..3874109 Escherichia coli UM146 12702227 YP_006112583.1 CDS UM146_18645 NC_017632.1 3874070 3875362 R COG0477 Permeases of the major facilitator superfamily; D-galactonate transporter complement(3874070..3875362) Escherichia coli UM146 12702228 YP_006112584.1 CDS UM146_18650 NC_017632.1 3875482 3876630 R COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; galactonate dehydratase complement(3875482..3876630) Escherichia coli UM146 12702229 YP_006112585.1 CDS UM146_18655 NC_017632.1 3876627 3877244 R COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(3876627..3877244) Escherichia coli UM146 12702230 YP_006112586.1 CDS UM146_18660 NC_017632.1 3877228 3878106 R COG3734 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase complement(3877228..3878106) Escherichia coli UM146 12702231 YP_006112587.1 CDS UM146_18665 NC_017632.1 3878103 3878792 R COG2186 Transcriptional regulators; putative DNA-binding transcriptional regulator complement(3878103..3878792) Escherichia coli UM146 12702232 YP_006112588.1 CDS UM146_18670 NC_017632.1 3879071 3879727 D hypothetical protein 3879071..3879727 Escherichia coli UM146 12702233 YP_006112589.1 CDS UM146_18675 NC_017632.1 3879771 3880583 R COG0561 Predicted hydrolases of the HAD superfamily; sugar phosphatase complement(3879771..3880583) Escherichia coli UM146 12702234 YP_006112590.1 CDS UM146_18680 NC_017632.1 3880698 3881096 R COG3753 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3880698..3881096) Escherichia coli UM146 12702235 YP_006112591.1 CDS gyrB NC_017632.1 3881336 3883750 R COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B complement(3881336..3883750) Escherichia coli UM146 12702236 YP_006112592.1 CDS recF NC_017632.1 3883779 3884852 R COG1195 Recombinational DNA repair ATPase (RecF pathway); recombination protein F complement(3883779..3884852) Escherichia coli UM146 12702237 YP_006112593.1 CDS UM146_18695 NC_017632.1 3884852 3885952 R COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta complement(3884852..3885952) Escherichia coli UM146 12702238 YP_006112594.1 CDS dnaA NC_017632.1 3885957 3887360 R COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein complement(3885957..3887360) Escherichia coli UM146 12702239 YP_006112595.1 CDS rpmH NC_017632.1 3887967 3888107 D COG0230 Ribosomal protein L34; 50S ribosomal protein L34 3887967..3888107 Escherichia coli UM146 12702240 YP_006112596.1 CDS rnpA NC_017632.1 3888157 3888483 D COG0594 RNase P protein component; ribonuclease P 3888157..3888483 Escherichia coli UM146 12702241 YP_006112597.1 CDS UM146_18715 NC_017632.1 3888447 3888704 D COG0759 Uncharacterized conserved protein; hypothetical protein 3888447..3888704 Escherichia coli UM146 12702242 YP_006112598.1 CDS UM146_18720 NC_017632.1 3888707 3890353 D COG0706 Preprotein translocase subunit YidC; putative inner membrane protein translocase component YidC 3888707..3890353 Escherichia coli UM146 12702243 YP_006112599.1 CDS trmE NC_017632.1 3890459 3891823 D COG0486 Predicted GTPase; tRNA modification GTPase TrmE 3890459..3891823 Escherichia coli UM146 12702244 YP_006112600.1 CDS tnaA NC_017632.1 3892360 3893775 D COG3033 Tryptophanase; tryptophanase 3892360..3893775 Escherichia coli UM146 12702245 YP_006112601.1 CDS UM146_18735 NC_017632.1 3893867 3895114 D COG0814 Amino acid permeases; tryptophan permease TnaB 3893867..3895114 Escherichia coli UM146 12702246 YP_006112602.1 CDS UM146_18740 NC_017632.1 3895246 3896421 D COG0477 Permeases of the major facilitator superfamily; multidrug efflux system protein MdtL 3895246..3896421 Escherichia coli UM146 12702247 YP_006112603.1 CDS UM146_18745 NC_017632.1 3896396 3897355 D COG0583 Transcriptional regulator; DNA-binding transcriptional regulator YidZ 3896396..3897355 Escherichia coli UM146 12702248 YP_006112604.1 CDS UM146_18750 NC_017632.1 3897512 3898261 D COG2091 Phosphopantetheinyl transferase; putative phosphopantetheinyl transferase 3897512..3898261 Escherichia coli UM146 12702249 YP_006112605.1 CDS UM146_18755 NC_017632.1 3898283 3898849 D COG0431 Predicted flavoprotein; chromate reductase, Class I, flavoprotein 3898283..3898849 Escherichia coli UM146 12702250 YP_006112606.1 CDS UM146_18760 NC_017632.1 3898902 3900239 R COG2252 Permeases; putative inner membrane protein complement(3898902..3900239) Escherichia coli UM146 12702251 YP_006112607.1 CDS UM146_18775 NC_017632.1 3901143 3901616 D putative inner membrane protein 3901143..3901616 Escherichia coli UM146 12702252 YP_006112608.1 CDS UM146_18780 NC_017632.1 3901698 3902420 R COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; putative 6-phosphogluconolactonase complement(3901698..3902420) Escherichia coli UM146 12702253 YP_006112609.1 CDS UM146_18785 NC_017632.1 3902435 3903604 R COG2382 Enterochelin esterase and related enzymes; putative xylanase complement(3902435..3903604) Escherichia coli UM146 12702254 YP_006112610.1 CDS UM146_18790 NC_017632.1 3903631 3905247 R COG4580 Maltoporin (phage lambda and maltose receptor); carbohydrate-specific outer membrane porin, cryptic complement(3903631..3905247) Escherichia coli UM146 12702255 YP_006112611.1 CDS UM146_18795 NC_017632.1 3905333 3906727 R COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; cryptic phospho-beta-glucosidase B complement(3905333..3906727) Escherichia coli UM146 12702256 YP_006112612.1 CDS UM146_18800 NC_017632.1 3906746 3908620 R COG1264 Phosphotransferase system IIB components; beta-glucoside-specific PTS system components IIABC complement(3906746..3908620) Escherichia coli UM146 12702257 YP_006112613.1 CDS UM146_18805 NC_017632.1 3908753 3909589 R COG3711 Transcriptional antiterminator; transcriptional antiterminator BglG complement(3908753..3909589) Escherichia coli UM146 12702258 YP_006112614.1 CDS UM146_18810 NC_017632.1 3909875 3910600 R COG0704 Phosphate uptake regulator; transcriptional regulator PhoU complement(3909875..3910600) Escherichia coli UM146 12702259 YP_006112615.1 CDS pstB NC_017632.1 3910615 3911388 R COG1117 ABC-type phosphate transport system, ATPase component; phosphate transporter ATP-binding protein complement(3910615..3911388) Escherichia coli UM146 12702260 YP_006112616.1 CDS pstA NC_017632.1 3911479 3912369 R COG0581 ABC-type phosphate transport system, permease component; phosphate transporter permease subunit PtsA complement(3911479..3912369) Escherichia coli UM146 12702261 YP_006112617.1 CDS pstC NC_017632.1 3912369 3913328 R COG0573 ABC-type phosphate transport system, permease component; phosphate transporter permease subunit PstC complement(3912369..3913328) Escherichia coli UM146 12702262 YP_006112618.1 CDS UM146_18830 NC_017632.1 3913415 3914455 R COG0226 ABC-type phosphate transport system, periplasmic component; phosphate ABC transporter substrate-binding protein complement(3913415..3914455) Escherichia coli UM146 12702263 YP_006112619.1 CDS UM146_18835 NC_017632.1 3914769 3916598 R COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase complement(3914769..3916598) Escherichia coli UM146 12702264 YP_006112620.1 CDS glmU NC_017632.1 3916759 3918129 R COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(3916759..3918129) Escherichia coli UM146 12702265 YP_006112621.1 CDS atpC NC_017632.1 3918483 3918896 R COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon complement(3918483..3918896) Escherichia coli UM146 12702266 YP_006112622.1 CDS UM146_18850 NC_017632.1 3918923 3920305 R COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta complement(3918923..3920305) Escherichia coli UM146 12702267 YP_006112623.1 CDS UM146_18855 NC_017632.1 3920332 3921195 R COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma complement(3920332..3921195) Escherichia coli UM146 12702268 YP_006112624.1 CDS UM146_18860 NC_017632.1 3921246 3922787 R COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha complement(3921246..3922787) Escherichia coli UM146 12702269 YP_006112625.1 CDS UM146_18865 NC_017632.1 3922800 3923333 R COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein); F0F1 ATP synthase subunit delta complement(3922800..3923333) Escherichia coli UM146 12702270 YP_006112626.1 CDS UM146_18870 NC_017632.1 3923348 3923818 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B complement(3923348..3923818) Escherichia coli UM146 12702271 YP_006112627.1 CDS UM146_18875 NC_017632.1 3923880 3924119 R COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C complement(3923880..3924119) Escherichia coli UM146 12702272 YP_006112628.1 CDS UM146_18880 NC_017632.1 3924166 3924981 R COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A complement(3924166..3924981) Escherichia coli UM146 12702273 YP_006112629.1 CDS UM146_18885 NC_017632.1 3924990 3925370 R F0F1 ATP synthase subunit I complement(3924990..3925370) Escherichia coli UM146 12702274 YP_006112630.1 CDS gidB NC_017632.1 3925986 3926609 R COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB complement(3925986..3926609) Escherichia coli UM146 12702275 YP_006112631.1 CDS UM146_18895 NC_017632.1 3926673 3928562 R COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3926673..3928562) Escherichia coli UM146 12702276 YP_006112632.1 CDS UM146_18900 NC_017632.1 3928941 3929384 R COG0716 Flavodoxins; flavodoxin complement(3928941..3929384) Escherichia coli UM146 12702277 YP_006112633.1 CDS UM146_18905 NC_017632.1 3929474 3929932 R COG1522 Transcriptional regulators; DNA-binding transcriptional regulator AsnC complement(3929474..3929932) Escherichia coli UM146 12702278 YP_006112634.1 CDS UM146_18910 NC_017632.1 3930084 3931076 D COG2502 Asparagine synthetase A; asparagine synthetase AsnA 3930084..3931076 Escherichia coli UM146 12702279 YP_006112635.1 CDS yieM NC_017632.1 3931081 3932532 R COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; hypothetical protein complement(3931081..3932532) Escherichia coli UM146 12702280 YP_006112636.1 CDS UM146_18920 NC_017632.1 3932526 3934022 R COG0714 MoxR-like ATPases; regulatory ATPase RavA complement(3932526..3934022) Escherichia coli UM146 12702281 YP_006112637.1 CDS trkD NC_017632.1 3934245 3936113 D COG3158 K+ transporter; potassium transport protein Kup 3934245..3936113 Escherichia coli UM146 12702282 YP_006112638.1 CDS UM146_18930 NC_017632.1 3936280 3936699 D COG1869 ABC-type ribose transport system, auxiliary component; D-ribose pyranase 3936280..3936699 Escherichia coli UM146 12702283 YP_006112639.1 CDS UM146_18935 NC_017632.1 3936707 3938212 D COG1129 ABC-type sugar transport system, ATPase component; D-ribose transporter ATP-binding protein 3936707..3938212 Escherichia coli UM146 12702284 YP_006112640.1 CDS rbsC NC_017632.1 3938217 3939182 D COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; ribose ABC transporter permease 3938217..3939182 Escherichia coli UM146 12702285 YP_006112641.1 CDS UM146_18945 NC_017632.1 3939207 3940097 D COG1879 ABC-type sugar transport system, periplasmic component; D-ribose transporter subunit RbsB 3939207..3940097 Escherichia coli UM146 12702286 YP_006112642.1 CDS UM146_18950 NC_017632.1 3940208 3941152 D COG0524 Sugar kinases, ribokinase family; ribokinase 3940208..3941152 Escherichia coli UM146 12702287 YP_006112643.1 CDS UM146_18955 NC_017632.1 3941165 3942148 D COG1609 Transcriptional regulators; transcriptional repressor RbsR 3941165..3942148 Escherichia coli UM146 12702288 YP_006112644.1 CDS UM146_18960 NC_017632.1 3942114 3943541 R COG0477 Permeases of the major facilitator superfamily; multidrug or homocysteine efflux system complement(3942114..3943541) Escherichia coli UM146 12702289 YP_006112645.1 CDS UM146_18965 NC_017632.1 3943564 3944256 R COG2186 Transcriptional regulators; putative transcriptional regulator complement(3943564..3944256) Escherichia coli UM146 12702290 YP_006112646.1 CDS UM146_18970 NC_017632.1 3950056 3950895 R COG0583 Transcriptional regulator; transcriptional regulator HdfR complement(3950056..3950895) Escherichia coli UM146 12702297 YP_006112647.1 CDS UM146_18975 NC_017632.1 3951014 3951352 D COG3085 Uncharacterized protein conserved in bacteria; hypothetical protein 3951014..3951352 Escherichia coli UM146 12702298 YP_006112648.1 CDS UM146_18980 NC_017632.1 3951377 3952897 R COG0606 Predicted ATPase with chaperone activity; putative ATP-dependent protease complement(3951377..3952897) Escherichia coli UM146 12702299 YP_006112649.1 CDS UM146_18985 NC_017632.1 3953488 3955134 D COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase 2 catalytic subunit 3953488..3955134 Escherichia coli UM146 12702300 YP_006112650.1 CDS ilvM NC_017632.1 3955134 3955394 D COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit; acetolactate synthase 2 regulatory subunit 3955134..3955394 Escherichia coli UM146 12702301 YP_006112651.1 CDS UM146_18995 NC_017632.1 3955414 3956343 D COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase 3955414..3956343 Escherichia coli UM146 12702302 YP_006112652.1 CDS UM146_19000 NC_017632.1 3956408 3958258 D COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; dihydroxy-acid dehydratase 3956408..3958258 Escherichia coli UM146 12702303 YP_006112653.1 CDS UM146_19005 NC_017632.1 3958258 3959805 D COG1171 Threonine dehydratase; threonine dehydratase 3958258..3959805 Escherichia coli UM146 12702304 YP_006112654.1 CDS UM146_19010 NC_017632.1 3959802 3960692 R COG0583 Transcriptional regulator; DNA-binding transcriptional regulator IlvY complement(3959802..3960692) Escherichia coli UM146 12702305 YP_006112655.1 CDS UM146_19015 NC_017632.1 3960842 3962317 D COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase 3960842..3962317 Escherichia coli UM146 12702306 YP_006112656.1 CDS UM146_19020 NC_017632.1 3962363 3962644 R COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase C complement(3962363..3962644) Escherichia coli UM146 12702307 YP_006112657.1 CDS UM146_19025 NC_017632.1 3962731 3964752 D COG0210 Superfamily I DNA and RNA helicases; ATP-dependent DNA helicase Rep 3962731..3964752 Escherichia coli UM146 12702308 YP_006112658.1 CDS UM146_19030 NC_017632.1 3964799 3966283 R COG0248 Exopolyphosphatase; guanosine pentaphosphate phosphohydrolase complement(3964799..3966283) Escherichia coli UM146 12702309 YP_006112659.1 CDS UM146_19035 NC_017632.1 3966419 3967684 R COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase RhlB complement(3966419..3967684) Escherichia coli UM146 12702310 YP_006112660.1 CDS trxA NC_017632.1 3967815 3968144 D COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 3967815..3968144 Escherichia coli UM146 12702311 YP_006112661.1 CDS UM146_19045 NC_017632.1 3968285 3968386 D putative rho operon leader peptide 3968285..3968386 Escherichia coli UM146 12702312 YP_006112662.1 CDS rho NC_017632.1 3968471 3969730 D COG1158 Transcription termination factor; transcription termination factor Rho 3968471..3969730 Escherichia coli UM146 12702313 YP_006112663.1 CDS UM146_19055 NC_017632.1 3969740 3969865 D hypothetical protein 3969740..3969865 Escherichia coli UM146 12702314 YP_006112664.1 CDS UM146_19060 NC_017632.1 3969970 3971073 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase 3969970..3971073 Escherichia coli UM146 12702315 YP_006112665.1 CDS UM146_19065 NC_017632.1 3971085 3972131 D COG3765 Chain length determinant protein; lipopolysaccharide biosynthesis protein WzzE 3971085..3972131 Escherichia coli UM146 12702316 YP_006112666.1 CDS UM146_19070 NC_017632.1 3972187 3973317 D COG0381 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 3972187..3973317 Escherichia coli UM146 12702317 YP_006112667.1 CDS wecC NC_017632.1 3973314 3974576 D COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; UDP-N-acetyl-D-mannosamine dehydrogenase 3973314..3974576 Escherichia coli UM146 12702318 YP_006112668.1 CDS UM146_19080 NC_017632.1 3974576 3975643 D COG1088 dTDP-D-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 3974576..3975643 Escherichia coli UM146 12702319 YP_006112669.1 CDS UM146_19085 NC_017632.1 3975662 3976543 D COG1209 dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase 3975662..3976543 Escherichia coli UM146 12702320 YP_006112670.1 CDS UM146_19090 NC_017632.1 3976521 3977195 D TDP-fucosamine acetyltransferase 3976521..3977195 Escherichia coli UM146 12702321 YP_006112671.1 CDS UM146_19095 NC_017632.1 3977200 3978330 D COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 3977200..3978330 Escherichia coli UM146 12702322 YP_006112672.1 CDS UM146_19100 NC_017632.1 3978332 3979582 D COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; O-antigen translocase 3978332..3979582 Escherichia coli UM146 12702323 YP_006112673.1 CDS UM146_19105 NC_017632.1 3979579 3980658 D 4-alpha-L-fucosyltransferase 3979579..3980658 Escherichia coli UM146 12702324 YP_006112674.1 CDS UM146_19110 NC_017632.1 3980655 3981914 D putative common antigen polymerase 3980655..3981914 Escherichia coli UM146 12702325 YP_006112675.1 CDS UM146_19115 NC_017632.1 3982009 3982749 D COG1922 Teichoic acid biosynthesis proteins; putative UDP-N-acetyl-D-mannosaminuronic acid transferase 3982009..3982749 Escherichia coli UM146 12702326 YP_006112676.1 CDS UM146_19120 NC_017632.1 3982940 3984325 D COG1113 Gamma-aminobutyrate permease and related permeases; putative transport protein YifK 3982940..3984325 Escherichia coli UM146 12702327 YP_006112677.1 CDS UM146_19125 NC_017632.1 3985011 3986246 D COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); regulator of arylsulfatase activity 3985011..3986246 Escherichia coli UM146 12702332 YP_006112678.1 CDS UM146_19130 NC_017632.1 3986404 3988059 R COG3119 Arylsulfatase A and related enzymes; arylsulfatase complement(3986404..3988059) Escherichia coli UM146 12702333 YP_006112679.1 CDS UM146_19135 NC_017632.1 3988738 3989934 R COG3071 Uncharacterized enzyme of heme biosynthesis; putative protoheme IX biogenesis protein complement(3988738..3989934) Escherichia coli UM146 12702334 YP_006112680.1 CDS UM146_19140 NC_017632.1 3989937 3991142 R COG2959 Uncharacterized enzyme of heme biosynthesis; putative uroporphyrinogen III C-methyltransferase complement(3989937..3991142) Escherichia coli UM146 12702335 YP_006112681.1 CDS hemD NC_017632.1 3991164 3991904 R COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase complement(3991164..3991904) Escherichia coli UM146 12702336 YP_006112682.1 CDS hemC NC_017632.1 3991901 3992863 R COG0181 Porphobilinogen deaminase; porphobilinogen deaminase complement(3991901..3992863) Escherichia coli UM146 12702337 YP_006112683.1 CDS cyaA NC_017632.1 3993229 3995775 D COG3072 Adenylate cyclase; adenylate cyclase 3993229..3995775 Escherichia coli UM146 12702338 YP_006112684.1 CDS cyaY NC_017632.1 3995815 3996135 R COG1965 Protein implicated in iron transport, frataxin homolog; frataxin-like protein complement(3995815..3996135) Escherichia coli UM146 12702339 YP_006112685.1 CDS UM146_19165 NC_017632.1 3996183 3997499 R hypothetical protein complement(3996183..3997499) Escherichia coli UM146 12702340 YP_006112686.1 CDS UM146_19170 NC_017632.1 3997496 3998965 R hypothetical protein complement(3997496..3998965) Escherichia coli UM146 12702341 YP_006112687.1 CDS UM146_19175 NC_017632.1 3999154 3999357 D COG5567 Predicted small periplasmic lipoprotein; putative lipoprotein 3999154..3999357 Escherichia coli UM146 12702342 YP_006112688.1 CDS dapF NC_017632.1 3999394 4000218 D COG0253 Diaminopimelate epimerase; diaminopimelate epimerase 3999394..4000218 Escherichia coli UM146 12702343 YP_006112689.1 CDS UM146_19185 NC_017632.1 4000215 4000922 D COG3159 Uncharacterized protein conserved in bacteria; hypothetical protein 4000215..4000922 Escherichia coli UM146 12702344 YP_006112690.1 CDS xerC NC_017632.1 4000919 4001815 D COG4973 Site-specific recombinase XerC; site-specific tyrosine recombinase XerC 4000919..4001815 Escherichia coli UM146 12702345 YP_006112691.1 CDS UM146_19195 NC_017632.1 4001815 4002531 D COG1011 Predicted hydrolase (HAD superfamily); flavin mononucleotide phosphatase 4001815..4002531 Escherichia coli UM146 12702346 YP_006112692.1 CDS uvrD NC_017632.1 4002615 4004777 D COG0210 Superfamily I DNA and RNA helicases; DNA-dependent helicase II 4002615..4004777 Escherichia coli UM146 12702347 YP_006112693.1 CDS UM146_19205 NC_017632.1 4004822 4005724 R COG1912 Uncharacterized conserved protein; hypothetical protein complement(4004822..4005724) Escherichia coli UM146 12702348 YP_006112694.1 CDS UM146_19210 NC_017632.1 4005807 4006571 R COG3698 Predicted periplasmic protein; hypothetical protein complement(4005807..4006571) Escherichia coli UM146 12702349 YP_006112695.1 CDS UM146_19215 NC_017632.1 4006941 4007891 D COG0598 Mg2+ and Co2+ transporters; magnesium/nickel/cobalt transporter CorA 4006941..4007891 Escherichia coli UM146 12702350 YP_006112696.1 CDS UM146_19220 NC_017632.1 4007927 4008424 R hypothetical protein complement(4007927..4008424) Escherichia coli UM146 12702351 YP_006112697.1 CDS UM146_19225 NC_017632.1 4008366 4009268 R hypothetical protein complement(4008366..4009268) Escherichia coli UM146 12702352 YP_006112698.1 CDS UM146_19230 NC_017632.1 4009579 4010469 R COG2962 Predicted permeases; putative chloramphenicol resistance permease complement(4009579..4010469) Escherichia coli UM146 12702353 YP_006112699.1 CDS UM146_19235 NC_017632.1 4010521 4010988 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein complement(4010521..4010988) Escherichia coli UM146 12702354 YP_006112700.1 CDS UM146_19240 NC_017632.1 4011153 4012022 D COG2829 Outer membrane phospholipase A; phospholipase A 4011153..4012022 Escherichia coli UM146 12702355 YP_006112701.1 CDS UM146_19245 NC_017632.1 4012141 4013976 D COG0514 Superfamily II DNA helicase; ATP-dependent DNA helicase RecQ 4012141..4013976 Escherichia coli UM146 12702356 YP_006112702.1 CDS UM146_19250 NC_017632.1 4014040 4014660 D COG1280 Putative threonine efflux protein; threonine efflux system 4014040..4014660 Escherichia coli UM146 12702357 YP_006112703.1 CDS rhtB NC_017632.1 4014721 4015341 R COG1280 Putative threonine efflux protein; homoserine/homoserine lactone efflux protein complement(4014721..4015341) Escherichia coli UM146 12702358 YP_006112704.1 CDS UM146_19260 NC_017632.1 4015452 4016474 D COG2267 Lysophospholipase; lysophospholipase L2 4015452..4016474 Escherichia coli UM146 12702359 YP_006112705.1 CDS UM146_19265 NC_017632.1 4016482 4017282 D COG0561 Predicted hydrolases of the HAD superfamily; putative sugar phosphatase 4016482..4017282 Escherichia coli UM146 12702360 YP_006112706.1 CDS UM146_19270 NC_017632.1 4017358 4018257 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; inner membrane protein 4017358..4018257 Escherichia coli UM146 12702361 YP_006112707.1 CDS UM146_19275 NC_017632.1 4018145 4019098 R COG0583 Transcriptional regulator; DNA-binding transcriptional activator MetR, homocysteine-binding protein complement(4018145..4019098) Escherichia coli UM146 12702362 YP_006112708.1 CDS UM146_19280 NC_017632.1 4019216 4021477 D COG0620 Methionine synthase II (cobalamin-independent); 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 4019216..4021477 Escherichia coli UM146 12702363 YP_006112709.1 CDS UM146_19285 NC_017632.1 4021646 4021891 R COG1695 Predicted transcriptional regulators; hypothetical protein complement(4021646..4021891) Escherichia coli UM146 12702364 YP_006112710.1 CDS UM146_19290 NC_017632.1 4021966 4022223 R COG0522 Ribosomal protein S4 and related proteins; hypothetical protein complement(4021966..4022223) Escherichia coli UM146 12702365 YP_006112711.1 CDS UM146_19300 NC_017632.1 4022910 4023020 D hypothetical protein 4022910..4023020 Escherichia coli UM146 12702366 YP_006112712.1 CDS UM146_19310 NC_017632.1 4023838 4024395 D COG0794 Predicted sugar phosphate isomerase involved in capsule formation; hypothetical protein 4023838..4024395 Escherichia coli UM146 12702367 YP_006112713.1 CDS UM146_19315 NC_017632.1 4024361 4025944 D COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; fused glucose-specific PTS enzymes: IIBcomponent and IIC component 4024361..4025944 Escherichia coli UM146 12702368 YP_006112714.1 CDS UM146_19320 NC_017632.1 4025995 4027992 D COG0021 Transketolase; transketolase 4025995..4027992 Escherichia coli UM146 12702369 YP_006112715.1 CDS UM146_19335 NC_017632.1 4029067 4029972 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(4029067..4029972) Escherichia coli UM146 12702370 YP_006112716.1 CDS UM146_19340 NC_017632.1 4030050 4031273 R COG1457 Purine-cytosine permease and related proteins; putative permease; putative Purine-cytosine permease and related proteins complement(4030050..4031273) Escherichia coli UM146 12702371 YP_006112717.1 CDS UM146_19345 NC_017632.1 4031299 4031688 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; hypothetical protein complement(4031299..4031688) Escherichia coli UM146 12702372 YP_006112718.1 CDS UM146_19350 NC_017632.1 4031705 4032661 R COG0549 Carbamate kinase; carbamate kinase complement(4031705..4032661) Escherichia coli UM146 12702373 YP_006112719.1 CDS UM146_19355 NC_017632.1 4032654 4034078 R hypothetical protein complement(4032654..4034078) Escherichia coli UM146 12702374 YP_006112720.1 CDS UM146_19360 NC_017632.1 4034075 4035634 R COG0074 Succinyl-CoA synthetase, alpha subunit; hypothetical protein complement(4034075..4035634) Escherichia coli UM146 12702375 YP_006112721.1 CDS UM146_19365 NC_017632.1 4035729 4036589 R hypothetical protein complement(4035729..4036589) Escherichia coli UM146 12702376 YP_006112722.1 CDS UM146_19370 NC_017632.1 4036595 4037263 R COG1335 Amidases related to nicotinamidase; hypothetical protein complement(4036595..4037263) Escherichia coli UM146 12702377 YP_006112723.1 CDS UM146_19375 NC_017632.1 4037394 4037489 D hypothetical protein 4037394..4037489 Escherichia coli UM146 12702378 YP_006112724.1 CDS UM146_19380 NC_017632.1 4037520 4038329 R COG0412 Dienelactone hydrolase and related enzymes; putative hydrolase complement(4037520..4038329) Escherichia coli UM146 12702379 YP_006112725.1 CDS UM146_19385 NC_017632.1 4038591 4039355 D COG2820 Uridine phosphorylase; uridine phosphorylase 4038591..4039355 Escherichia coli UM146 12702380 YP_006112726.1 CDS UM146_19400 NC_017632.1 4040894 4041400 R hypothetical protein complement(4040894..4041400) Escherichia coli UM146 12702381 YP_006112727.1 CDS UM146_19405 NC_017632.1 4041417 4042391 R COG3181 Uncharacterized protein conserved in bacteria; putative periplasmic binding protein complement(4041417..4042391) Escherichia coli UM146 12702382 YP_006112728.1 CDS UM146_19410 NC_017632.1 4042416 4043045 R COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(4042416..4043045) Escherichia coli UM146 12702383 YP_006112729.1 CDS UM146_19415 NC_017632.1 4043035 4043814 R COG3734 2-keto-3-deoxy-galactonokinase; acidic carbohydrate kinase complement(4043035..4043814) Escherichia coli UM146 12702384 YP_006112730.1 CDS UM146_19420 NC_017632.1 4044063 4044830 R COG1414 Transcriptional regulator; putative transcriptional regulator complement(4044063..4044830) Escherichia coli UM146 12702385 YP_006112731.1 CDS UM146_19425 NC_017632.1 4045062 4046474 D COG1322 Uncharacterized protein conserved in bacteria; DNA recombination protein RmuC 4045062..4046474 Escherichia coli UM146 12702386 YP_006112732.1 CDS ubiE NC_017632.1 4046569 4047324 D COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase 4046569..4047324 Escherichia coli UM146 12702387 YP_006112733.1 CDS UM146_19435 NC_017632.1 4047338 4047943 D COG3165 Uncharacterized protein conserved in bacteria; sterol-binding domain protein 4047338..4047943 Escherichia coli UM146 12702388 YP_006112734.1 CDS ubiB NC_017632.1 4047940 4049580 D COG0661 Predicted unusual protein kinase; putative ubiquinone biosynthesis protein UbiB 4047940..4049580 Escherichia coli UM146 12702389 YP_006112735.1 CDS tatA NC_017632.1 4049659 4049928 D COG1826 Sec-independent protein secretion pathway components; twin arginine translocase protein A 4049659..4049928 Escherichia coli UM146 12702390 YP_006112736.1 CDS UM146_19450 NC_017632.1 4049932 4050447 D COG1826 Sec-independent protein secretion pathway components; sec-independent translocase 4049932..4050447 Escherichia coli UM146 12702391 YP_006112737.1 CDS UM146_19455 NC_017632.1 4050450 4051226 D COG0805 Sec-independent protein secretion pathway component TatC; twin-arginine protein translocation system subunit TatC 4050450..4051226 Escherichia coli UM146 12702392 YP_006112738.1 CDS UM146_19460 NC_017632.1 4051268 4052050 D COG0084 Mg-dependent DNase; DNase TatD 4051268..4052050 Escherichia coli UM146 12702393 YP_006112739.1 CDS rfaH NC_017632.1 4052047 4052535 R COG0250 Transcription antiterminator; transcriptional activator RfaH complement(4052047..4052535) Escherichia coli UM146 12702394 YP_006112740.1 CDS UM146_19470 NC_017632.1 4052702 4054195 D COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 4052702..4054195 Escherichia coli UM146 12702395 YP_006112741.1 CDS fre NC_017632.1 4054241 4054942 D COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; FMN reductase 4054241..4054942 Escherichia coli UM146 12702396 YP_006112742.1 CDS fadA NC_017632.1 4055225 4056388 R COG0183 Acetyl-CoA acetyltransferase; 3-ketoacyl-CoA thiolase complement(4055225..4056388) Escherichia coli UM146 12702397 YP_006112743.1 CDS fadB NC_017632.1 4056398 4058587 R COG1024 Enoyl-CoA hydratase/carnithine racemase; multifunctional fatty acid oxidation complex subunit alpha complement(4056398..4058587) Escherichia coli UM146 12702398 YP_006112744.1 CDS UM146_19490 NC_017632.1 4058777 4060108 D COG0006 Xaa-Pro aminopeptidase; proline dipeptidase 4058777..4060108 Escherichia coli UM146 12702399 YP_006112745.1 CDS UM146_19495 NC_017632.1 4060108 4060722 D COG1739 Uncharacterized conserved protein; hypothetical protein 4060108..4060722 Escherichia coli UM146 12702400 YP_006112746.1 CDS UM146_19500 NC_017632.1 4060761 4062212 D COG0168 Trk-type K+ transport systems, membrane components; potassium transporter 4060761..4062212 Escherichia coli UM146 12702401 YP_006112747.1 CDS hemG NC_017632.1 4062224 4062769 D COG4635 Flavodoxin; protoporphyrinogen oxidase 4062224..4062769 Escherichia coli UM146 12702402 YP_006112748.1 CDS UM146_19510 NC_017632.1 4068350 4068877 R COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein MobB complement(4068350..4068877) Escherichia coli UM146 12702408 YP_006112749.1 CDS mobA NC_017632.1 4068859 4069443 R COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(4068859..4069443) Escherichia coli UM146 12702409 YP_006112750.1 CDS UM146_19520 NC_017632.1 4069513 4069782 D COG3084 Uncharacterized protein conserved in bacteria; hypothetical protein 4069513..4069782 Escherichia coli UM146 12702410 YP_006112751.1 CDS UM146_19525 NC_017632.1 4069859 4070845 D COG2334 Putative homoserine kinase type II (protein kinase fold); serine/threonine protein kinase 4069859..4070845 Escherichia coli UM146 12702411 YP_006112752.1 CDS UM146_19530 NC_017632.1 4070862 4071488 D COG0526 Thiol-disulfide isomerase and thioredoxins; protein disulfide isomerase I 4070862..4071488 Escherichia coli UM146 12702412 YP_006112753.1 CDS UM146_19535 NC_017632.1 4071643 4073073 D COG5339 Uncharacterized protein conserved in bacteria; hypothetical protein 4071643..4073073 Escherichia coli UM146 12702413 YP_006112754.1 CDS UM146_19540 NC_017632.1 4073114 4074046 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; putative acyltransferase complement(4073114..4074046) Escherichia coli UM146 12702414 YP_006112755.1 CDS UM146_19545 NC_017632.1 4074166 4074408 R hypothetical protein complement(4074166..4074408) Escherichia coli UM146 12702415 YP_006112756.1 CDS UM146_19550 NC_017632.1 4074410 4077196 D COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I 4074410..4077196 Escherichia coli UM146 12702416 YP_006112757.1 CDS engB NC_017632.1 4077578 4078210 R COG0218 Predicted GTPase; ribosome biogenesis GTP-binding protein YsxC complement(4077578..4078210) Escherichia coli UM146 12702417 YP_006112758.1 CDS UM146_19560 NC_017632.1 4078792 4079301 D COG3078 Uncharacterized protein conserved in bacteria; hypothetical protein 4078792..4079301 Escherichia coli UM146 12702418 YP_006112759.1 CDS UM146_19565 NC_017632.1 4079375 4079491 R hypothetical protein complement(4079375..4079491) Escherichia coli UM146 12702419 YP_006112760.1 CDS UM146_19570 NC_017632.1 4079490 4080863 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 4079490..4080863 Escherichia coli UM146 12702420 YP_006112761.1 CDS UM146_19575 NC_017632.1 4081001 4081111 R hypothetical protein complement(4081001..4081111) Escherichia coli UM146 12702421 YP_006112762.1 CDS glnG NC_017632.1 4081223 4082641 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; nitrogen regulation protein NR(I) complement(4081223..4082641) Escherichia coli UM146 12702422 YP_006112763.1 CDS glnL NC_017632.1 4082644 4083693 R COG3852 Signal transduction histidine kinase, nitrogen specific; nitrogen regulation protein NR(II) complement(4082644..4083693) Escherichia coli UM146 12702423 YP_006112764.1 CDS glnA NC_017632.1 4083867 4085276 R COG0174 Glutamine synthetase; glutamine synthetase complement(4083867..4085276) Escherichia coli UM146 12702424 YP_006112765.1 CDS UM146_19595 NC_017632.1 4085649 4087472 D COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein 4085649..4087472 Escherichia coli UM146 12702425 YP_006112766.1 CDS UM146_19600 NC_017632.1 4087579 4088367 R COG1349 Transcriptional regulators of sugar metabolism; DeoR family transcriptional regulator complement(4087579..4088367) Escherichia coli UM146 12702426 YP_006112767.1 CDS UM146_19605 NC_017632.1 4088407 4089303 R COG0524 Sugar kinases, ribokinase family; putative sugar kinase complement(4088407..4089303) Escherichia coli UM146 12702427 YP_006112768.1 CDS UM146_19610 NC_017632.1 4089475 4090353 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; putative oxidoreductase with NAD(P)-binding Rossmann-fold domain, putative 3-hydroxyisobutyrate dehydrogenase 4089475..4090353 Escherichia coli UM146 12702428 YP_006112769.1 CDS UM146_19615 NC_017632.1 4090378 4091265 D COG3684 Tagatose-1,6-bisphosphate aldolase; putative aldolase yihT 4090378..4091265 Escherichia coli UM146 12702429 YP_006112770.1 CDS UM146_19620 NC_017632.1 4091298 4092308 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; hypothetical protein 4091298..4092308 Escherichia coli UM146 12702430 YP_006112771.1 CDS UM146_19625 NC_017632.1 4092378 4093811 D COG0477 Permeases of the major facilitator superfamily; putative transporter 4092378..4093811 Escherichia coli UM146 12702431 YP_006112772.1 CDS UM146_19630 NC_017632.1 4093910 4095259 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 4093910..4095259 Escherichia coli UM146 12702432 YP_006112773.1 CDS UM146_19635 NC_017632.1 4095249 4096136 D COG2017 Galactose mutarotase and related enzymes; hypothetical protein 4095249..4096136 Escherichia coli UM146 12702433 YP_006112774.1 CDS UM146_19640 NC_017632.1 4096277 4096876 D COG1011 Predicted hydrolase (HAD superfamily); phosphatase 4096277..4096876 Escherichia coli UM146 12702434 YP_006112775.1 CDS rbn NC_017632.1 4096870 4097742 D COG1295 Predicted membrane protein; ribonuclease BN 4096870..4097742 Escherichia coli UM146 12702435 YP_006112776.1 CDS UM146_19650 NC_017632.1 4097739 4098176 D COG1490 D-Tyr-tRNAtyr deacylase; D-tyrosyl-tRNA(Tyr) deacylase 4097739..4098176 Escherichia coli UM146 12702436 YP_006112777.1 CDS UM146_19655 NC_017632.1 4098221 4099162 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase 4098221..4099162 Escherichia coli UM146 12702437 YP_006112778.1 CDS UM146_19660 NC_017632.1 4099226 4100134 R COG0657 Esterase/lipase; putative lipase complement(4099226..4100134) Escherichia coli UM146 12702438 YP_006112779.1 CDS UM146_19665 NC_017632.1 4100363 4100674 D hypothetical protein 4100363..4100674 Escherichia coli UM146 12702439 YP_006112780.1 CDS UM146_19670 NC_017632.1 4100675 4100965 D COG2944 Predicted transcriptional regulator; hypothetical protein 4100675..4100965 Escherichia coli UM146 12702440 YP_006112781.1 CDS UM146_19675 NC_017632.1 4101050 4101262 D hypothetical protein 4101050..4101262 Escherichia coli UM146 12702441 YP_006112782.1 CDS UM146_19680 NC_017632.1 4101997 4102215 D COG3905 Predicted transcriptional regulator; putative transcriptional regulator 4101997..4102215 Escherichia coli UM146 12702442 YP_006112783.1 CDS UM146_19685 NC_017632.1 4102431 4103360 R COG3058 Uncharacterized protein involved in formate dehydrogenase formation; formate dehydrogenase accessory protein FdhE complement(4102431..4103360) Escherichia coli UM146 12702443 YP_006112784.1 CDS UM146_19690 NC_017632.1 4103357 4103992 R COG2864 Cytochrome b subunit of formate dehydrogenase; formate dehydrogenase-O subunit gamma complement(4103357..4103992) Escherichia coli UM146 12702444 YP_006112785.1 CDS UM146_19695 NC_017632.1 4103989 4104891 R COG0437 Fe-S-cluster-containing hydrogenase components 1; formate dehydrogenase-O, iron-sulfur subunit complement(4103989..4104891) Escherichia coli UM146 12702445 YP_006112786.1 CDS UM146_19700 NC_017632.1 4104904 4107318 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-O, large subunit complement(4104904..4107318) Escherichia coli UM146 12702446 YP_006112787.1 CDS UM146_19705 NC_017632.1 4107367 4107954 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-O, large subunit complement(4107367..4107954) Escherichia coli UM146 12702447 YP_006112788.1 CDS UM146_19710 NC_017632.1 4108148 4108981 D COG1526 Uncharacterized protein required for formate dehydrogenase activity; formate dehydrogenase accessory protein 4108148..4108981 Escherichia coli UM146 12702448 YP_006112789.1 CDS UM146_19725 NC_017632.1 4110111 4111505 D putative glycoporin 4110111..4111505 Escherichia coli UM146 12702449 YP_006112790.1 CDS UM146_19730 NC_017632.1 4111546 4111860 R COG3254 Uncharacterized conserved protein; L-rhamnose mutarotase complement(4111546..4111860) Escherichia coli UM146 12702450 YP_006112791.1 CDS UM146_19735 NC_017632.1 4111870 4112694 R COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; rhamnulose-1-phosphate aldolase complement(4111870..4112694) Escherichia coli UM146 12702451 YP_006112792.1 CDS UM146_19740 NC_017632.1 4112971 4114230 R COG4806 L-rhamnose isomerase; L-rhamnose isomerase complement(4112971..4114230) Escherichia coli UM146 12702452 YP_006112793.1 CDS rhaB NC_017632.1 4114227 4115696 R COG1070 Sugar (pentulose and hexulose) kinases; rhamnulokinase complement(4114227..4115696) Escherichia coli UM146 12702453 YP_006112794.1 CDS UM146_19750 NC_017632.1 4115775 4115924 D hypothetical protein 4115775..4115924 Escherichia coli UM146 12702454 YP_006112795.1 CDS UM146_19755 NC_017632.1 4115984 4116820 D COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional activator RhaS 4115984..4116820 Escherichia coli UM146 12702455 YP_006112796.1 CDS UM146_19760 NC_017632.1 4116804 4117742 D COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional activator RhaR 4116804..4117742 Escherichia coli UM146 12702456 YP_006112797.1 CDS UM146_19765 NC_017632.1 4117739 4118773 R rhamnose-proton symporter complement(4117739..4118773) Escherichia coli UM146 12702457 YP_006112798.1 CDS UM146_19770 NC_017632.1 4119058 4119678 D COG0605 Superoxide dismutase; superoxide dismutase 4119058..4119678 Escherichia coli UM146 12702458 YP_006112799.1 CDS UM146_19775 NC_017632.1 4119707 4119835 R hypothetical protein complement(4119707..4119835) Escherichia coli UM146 12702459 YP_006112800.1 CDS UM146_19780 NC_017632.1 4119938 4120921 D 2-keto-3-deoxygluconate permease 4119938..4120921 Escherichia coli UM146 12702460 YP_006112801.1 CDS UM146_19785 NC_017632.1 4121070 4121744 D COG2258 Uncharacterized protein conserved in bacteria; hypothetical protein 4121070..4121744 Escherichia coli UM146 12702461 YP_006112802.1 CDS cpxA NC_017632.1 4121850 4123223 R COG0642 Signal transduction histidine kinase; two-component sensor protein complement(4121850..4123223) Escherichia coli UM146 12702462 YP_006112803.1 CDS UM146_19795 NC_017632.1 4123220 4123918 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator CpxR complement(4123220..4123918) Escherichia coli UM146 12702463 YP_006112804.1 CDS cpxP NC_017632.1 4124065 4124568 D COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; repressor CpxP 4124065..4124568 Escherichia coli UM146 12702464 YP_006112805.1 CDS fieF NC_017632.1 4124716 4125618 D COG0053 Predicted Co/Zn/Cd cation transporters; ferrous iron efflux protein F 4124716..4125618 Escherichia coli UM146 12702465 YP_006112806.1 CDS UM146_19810 NC_017632.1 4125799 4126761 D COG0205 6-phosphofructokinase; 6-phosphofructokinase 4125799..4126761 Escherichia coli UM146 12702466 YP_006112807.1 CDS UM146_19815 NC_017632.1 4127081 4128070 D COG1613 ABC-type sulfate transport system, periplasmic component; sulfate transporter subunit 4127081..4128070 Escherichia coli UM146 12702467 YP_006112808.1 CDS UM146_19820 NC_017632.1 4128176 4128931 D COG2134 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase 4128176..4128931 Escherichia coli UM146 12702468 YP_006112809.1 CDS tpiA NC_017632.1 4128986 4129753 R COG0149 Triosephosphate isomerase; triosephosphate isomerase complement(4128986..4129753) Escherichia coli UM146 12702469 YP_006112810.1 CDS UM146_19830 NC_017632.1 4129861 4130460 R hypothetical protein complement(4129861..4130460) Escherichia coli UM146 12702470 YP_006112811.1 CDS UM146_19835 NC_017632.1 4130561 4131001 D COG3152 Predicted membrane protein; hypothetical protein 4130561..4131001 Escherichia coli UM146 12702471 YP_006112812.1 CDS UM146_19840 NC_017632.1 4131213 4131512 D COG3691 Uncharacterized protein conserved in bacteria; hypothetical protein 4131213..4131512 Escherichia coli UM146 12702472 YP_006112813.1 CDS UM146_19845 NC_017632.1 4131539 4131967 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspD 4131539..4131967 Escherichia coli UM146 12702473 YP_006112814.1 CDS UM146_19850 NC_017632.1 4131972 4132718 R COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; ferredoxin-NADP reductase complement(4131972..4132718) Escherichia coli UM146 12702474 YP_006112815.1 CDS glpX NC_017632.1 4132815 4133825 R COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins; fructose 1,6-bisphosphatase II complement(4132815..4133825) Escherichia coli UM146 12702475 YP_006112816.1 CDS glpK NC_017632.1 4133996 4135441 R COG0554 Glycerol kinase; glycerol kinase complement(4133996..4135441) Escherichia coli UM146 12702476 YP_006112817.1 CDS UM146_19865 NC_017632.1 4135526 4136212 R COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); glycerol uptake facilitator protein complement(4135526..4136212) Escherichia coli UM146 12702477 YP_006112818.1 CDS UM146_19870 NC_017632.1 4136275 4136370 R hypothetical protein complement(4136275..4136370) Escherichia coli UM146 12702478 YP_006112819.1 CDS UM146_19875 NC_017632.1 4136801 4136974 D COG3074 Uncharacterized protein conserved in bacteria; cell division protein zapB 4136801..4136974 Escherichia coli UM146 12702479 YP_006112820.1 CDS UM146_19880 NC_017632.1 4137124 4137609 R COG0684 Demethylmenaquinone methyltransferase; ribonuclease activity regulator protein RraA complement(4137124..4137609) Escherichia coli UM146 12702480 YP_006112821.1 CDS UM146_19885 NC_017632.1 4137702 4138640 R COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(4137702..4138640) Escherichia coli UM146 12702481 YP_006112822.1 CDS hslU NC_017632.1 4138695 4140026 R COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU complement(4138695..4140026) Escherichia coli UM146 12702482 YP_006112823.1 CDS UM146_19895 NC_017632.1 4140036 4140566 R COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease peptidase subunit complement(4140036..4140566) Escherichia coli UM146 12702483 YP_006112824.1 CDS UM146_19900 NC_017632.1 4140659 4141618 R COG3087 Cell division protein; cell division protein FtsN complement(4140659..4141618) Escherichia coli UM146 12702484 YP_006112825.1 CDS UM146_19915 NC_017632.1 4142890 4145088 R COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA complement(4142890..4145088) Escherichia coli UM146 12702485 YP_006112826.1 CDS rpmE NC_017632.1 4145291 4145503 D COG0254 Ribosomal protein L31; 50S ribosomal protein L31 4145291..4145503 Escherichia coli UM146 12702486 YP_006112827.1 CDS UM146_19925 NC_017632.1 4145564 4146172 R putative peptidoglycan peptidase complement(4145564..4146172) Escherichia coli UM146 12702487 YP_006112828.1 CDS UM146_19930 NC_017632.1 4146232 4146453 R COG3060 Transcriptional regulator of met regulon; transcriptional repressor protein MetJ complement(4146232..4146453) Escherichia coli UM146 12702488 YP_006112829.1 CDS UM146_19935 NC_017632.1 4146825 4147985 D COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase, PLP-dependent 4146825..4147985 Escherichia coli UM146 12702489 YP_006112830.1 CDS metL NC_017632.1 4147988 4150420 D COG0527 Aspartokinases; bifunctional aspartate kinase II/homoserine dehydrogenase II 4147988..4150420 Escherichia coli UM146 12702490 YP_006112831.1 CDS UM146_19945 NC_017632.1 4150638 4151498 R COG3248 Nucleoside-binding outer membrane protein; nucleoside channel phage T6/colicin K receptor complement(4150638..4151498) Escherichia coli UM146 12702491 YP_006112832.1 CDS UM146_19950 NC_017632.1 4151575 4153194 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases complement(4151575..4153194) Escherichia coli UM146 12702492 YP_006112833.1 CDS UM146_19955 NC_017632.1 4153235 4154788 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; putative 5'-nucleotidase complement(4153235..4154788) Escherichia coli UM146 12702493 YP_006112834.1 CDS UM146_19960 NC_017632.1 4156275 4157828 D COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like esterase 4156275..4157828 Escherichia coli UM146 12702494 YP_006112835.1 CDS metF NC_017632.1 4158210 4159100 D COG0685 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 4158210..4159100 Escherichia coli UM146 12702495 YP_006112836.1 CDS UM146_19970 NC_017632.1 4159429 4161609 D COG0376 Catalase (peroxidase I); catalase/hydroperoxidase HPI(I) 4159429..4161609 Escherichia coli UM146 12702496 YP_006112837.1 CDS UM146_19975 NC_017632.1 4161703 4162608 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; permease 4161703..4162608 Escherichia coli UM146 12702497 YP_006112838.1 CDS UM146_19980 NC_017632.1 4162635 4163252 R COG3738 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4162635..4163252) Escherichia coli UM146 12702498 YP_006112839.1 CDS gldA NC_017632.1 4163527 4164630 R COG0371 Glycerol dehydrogenase and related enzymes; glycerol dehydrogenase complement(4163527..4164630) Escherichia coli UM146 12702499 YP_006112840.1 CDS UM146_19990 NC_017632.1 4164641 4165303 R COG0176 Transaldolase; fructose-6-phosphate aldolase complement(4164641..4165303) Escherichia coli UM146 12702500 YP_006112841.1 CDS UM146_19995 NC_017632.1 4165315 4167816 R COG1925 Phosphotransferase system, HPr-related proteins; phosphoenolpyruvate-protein phosphotransferase PtsA complement(4165315..4167816) Escherichia coli UM146 12702501 YP_006112842.1 CDS UM146_20000 NC_017632.1 4168125 4169204 D COG1299 Phosphotransferase system, fructose-specific IIC component; putative fructose-like permease EIIC subunit 2 4168125..4169204 Escherichia coli UM146 12702502 YP_006112843.1 CDS UM146_20005 NC_017632.1 4169219 4169539 D COG1445 Phosphotransferase system fructose-specific component IIB; putative fructose-like phosphotransferase EIIB subunit 2 4169219..4169539 Escherichia coli UM146 12702503 YP_006112844.1 CDS pflD NC_017632.1 4169590 4171887 D COG1882 Pyruvate-formate lyase; putative formate acetyltransferase 2 4169590..4171887 Escherichia coli UM146 12702504 YP_006112845.1 CDS UM146_20015 NC_017632.1 4171853 4172731 D COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase II activase 4171853..4172731 Escherichia coli UM146 12702505 YP_006112846.1 CDS UM146_20020 NC_017632.1 4172733 4173074 D COG1445 Phosphotransferase system fructose-specific component IIB; putative fructose-like phosphotransferase EIIB subunit 3 4172733..4173074 Escherichia coli UM146 12702506 YP_006112847.1 CDS UM146_20025 NC_017632.1 4173061 4173912 R COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator complement(4173061..4173912) Escherichia coli UM146 12702507 YP_006112848.1 CDS UM146_20030 NC_017632.1 4174138 4175871 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein complement(4174138..4175871) Escherichia coli UM146 12702508 YP_006112849.1 CDS UM146_20035 NC_017632.1 4176054 4178705 R COG2352 Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase complement(4176054..4178705) Escherichia coli UM146 12702509 YP_006112850.1 CDS UM146_20040 NC_017632.1 4179007 4180158 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; acetylornithine deacetylase complement(4179007..4180158) Escherichia coli UM146 12702510 YP_006112851.1 CDS argC NC_017632.1 4180312 4181316 D COG0002 Acetylglutamate semialdehyde dehydrogenase; N-acetyl-gamma-glutamyl-phosphate reductase 4180312..4181316 Escherichia coli UM146 12702511 YP_006112852.1 CDS UM146_20050 NC_017632.1 4181327 4182100 D COG0548 Acetylglutamate kinase; acetylglutamate kinase 4181327..4182100 Escherichia coli UM146 12702512 YP_006112853.1 CDS UM146_20055 NC_017632.1 4182161 4183534 D COG0165 Argininosuccinate lyase; argininosuccinate lyase 4182161..4183534 Escherichia coli UM146 12702513 YP_006112854.1 CDS UM146_20060 NC_017632.1 4184032 4185246 D COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; starvation sensing protein RspA 4184032..4185246 Escherichia coli UM146 12702514 YP_006112855.1 CDS UM146_20065 NC_017632.1 4185313 4186596 D COG0477 Permeases of the major facilitator superfamily; Putative transporter 4185313..4186596 Escherichia coli UM146 12702515 YP_006112856.1 CDS UM146_20070 NC_017632.1 4186848 4187765 D COG0583 Transcriptional regulator; DNA-binding transcriptional regulator OxyR 4186848..4187765 Escherichia coli UM146 12702516 YP_006112857.1 CDS UM146_20075 NC_017632.1 4187748 4189148 R COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; soluble pyridine nucleotide transhydrogenase complement(4187748..4189148) Escherichia coli UM146 12702517 YP_006112858.1 CDS UM146_20080 NC_017632.1 4189478 4190644 D COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; Hippurate hydrolase (Benzoylglycine amidohydrolase) (Hippuricase) 4189478..4190644 Escherichia coli UM146 12702518 YP_006112859.1 CDS UM146_20085 NC_017632.1 4190687 4192003 D COG0477 Permeases of the major facilitator superfamily; putative proton/ carboxylic acid permease 4190687..4192003 Escherichia coli UM146 12702519 YP_006112860.1 CDS UM146_20090 NC_017632.1 4192053 4192757 D COG1309 Transcriptional regulator; DNA-binding transcriptional repressor FabR 4192053..4192757 Escherichia coli UM146 12702520 YP_006112861.1 CDS UM146_20095 NC_017632.1 4192757 4193116 D hypothetical protein 4192757..4193116 Escherichia coli UM146 12702521 YP_006112862.1 CDS UM146_20100 NC_017632.1 4193156 4194256 R COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; tRNA (uracil-5-)-methyltransferase complement(4193156..4194256) Escherichia coli UM146 12702522 YP_006112863.1 CDS btuB NC_017632.1 4194625 4196469 D COG4206 Outer membrane cobalamin receptor protein; vitamin B12/cobalamin outer membrane transporter 4194625..4196469 Escherichia coli UM146 12702523 YP_006112864.1 CDS UM146_20110 NC_017632.1 4196414 4197271 D COG0796 Glutamate racemase; glutamate racemase 4196414..4197271 Escherichia coli UM146 12702524 YP_006112865.1 CDS UM146_20115 NC_017632.1 4202737 4203120 D COG1077 Actin-like ATPase involved in cell morphogenesis; hypothetical protein 4202737..4203120 Escherichia coli UM146 12702529 YP_006112866.1 CDS UM146_20120 NC_017632.1 4203184 4203627 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein complement(4203184..4203627) Escherichia coli UM146 12702530 YP_006112867.1 CDS UM146_20125 NC_017632.1 4203784 4204713 D COG1897 Homoserine trans-succinylase; homoserine O-succinyltransferase 4203784..4204713 Escherichia coli UM146 12702531 YP_006112868.1 CDS UM146_20130 NC_017632.1 4204982 4206583 D COG2225 Malate synthase; malate synthase 4204982..4206583 Escherichia coli UM146 12702532 YP_006112869.1 CDS UM146_20135 NC_017632.1 4206613 4207917 D COG2224 Isocitrate lyase; isocitrate lyase 4206613..4207917 Escherichia coli UM146 12702533 YP_006112870.1 CDS aceK NC_017632.1 4207966 4209690 D COG4579 Isocitrate dehydrogenase kinase/phosphatase; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 4207966..4209690 Escherichia coli UM146 12702534 YP_006112871.1 CDS UM146_20145 NC_017632.1 4209632 4209799 D hypothetical protein 4209632..4209799 Escherichia coli UM146 12702535 YP_006112872.1 CDS UM146_20150 NC_017632.1 4209707 4210531 R COG1414 Transcriptional regulator; IclR family transcriptional regulator complement(4209707..4210531) Escherichia coli UM146 12702536 YP_006112873.1 CDS metH NC_017632.1 4210731 4214414 D COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain; B12-dependent methionine synthase 4210731..4214414 Escherichia coli UM146 12702537 YP_006112874.1 CDS UM146_20160 NC_017632.1 4214474 4214578 D hypothetical protein 4214474..4214578 Escherichia coli UM146 12702538 YP_006112875.1 CDS UM146_20165 NC_017632.1 4214575 4214793 D hypothetical protein 4214575..4214793 Escherichia coli UM146 12702539 YP_006112876.1 CDS UM146_20170 NC_017632.1 4214836 4215285 D hypothetical protein 4214836..4215285 Escherichia coli UM146 12702540 YP_006112877.1 CDS UM146_20175 NC_017632.1 4215531 4217087 D COG1283 Na+/phosphate symporter; putative transporter 4215531..4217087 Escherichia coli UM146 12702541 YP_006112878.1 CDS UM146_20180 NC_017632.1 4217177 4217866 R COG3340 Peptidase E; peptidase E complement(4217177..4217866) Escherichia coli UM146 12702542 YP_006112879.1 CDS UM146_20185 NC_017632.1 4217973 4218128 D hypothetical protein 4217973..4218128 Escherichia coli UM146 12702543 YP_006112880.1 CDS UM146_20190 NC_017632.1 4218248 4219477 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; L-sorbose 1-phosphate reductase complement(4218248..4219477) Escherichia coli UM146 12702544 YP_006112881.1 CDS UM146_20195 NC_017632.1 4219585 4220352 R COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; sorbose permease IID component complement(4219585..4220352) Escherichia coli UM146 12702545 YP_006112882.1 CDS UM146_20200 NC_017632.1 4220363 4221160 R COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; sorbose permease IIC component (PTS system) complement(4220363..4221160) Escherichia coli UM146 12702546 YP_006112883.1 CDS UM146_20205 NC_017632.1 4221226 4221720 R COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; sorbose-specific phosphotransferase enzyme IIB component (PTS system) complement(4221226..4221720) Escherichia coli UM146 12702547 YP_006112884.1 CDS UM146_20210 NC_017632.1 4221720 4222127 R COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; sorbose-specific phosphotransferase enzyme IIA component (PTS system) complement(4221720..4222127) Escherichia coli UM146 12702548 YP_006112885.1 CDS UM146_20215 NC_017632.1 4222137 4222943 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); sorbitol-6-phosphate 2-dehydrogenase complement(4222137..4222943) Escherichia coli UM146 12702549 YP_006112886.1 CDS UM146_20220 NC_017632.1 4223013 4223960 R COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain; putative transcriptional regulator of sorbose uptake and utilization genes complement(4223013..4223960) Escherichia coli UM146 12702550 YP_006112887.1 CDS UM146_20225 NC_017632.1 4224308 4225180 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 23S rRNA pseudouridine synthase F 4224308..4225180 Escherichia coli UM146 12702551 YP_006112888.1 CDS UM146_20230 NC_017632.1 4225181 4225453 R hypothetical protein complement(4225181..4225453) Escherichia coli UM146 12702552 YP_006112889.1 CDS UM146_20235 NC_017632.1 4225706 4227055 R COG0527 Aspartokinases; aspartate kinase III complement(4225706..4227055) Escherichia coli UM146 12702553 YP_006112890.1 CDS pgi NC_017632.1 4227580 4229229 D COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 4227580..4229229 Escherichia coli UM146 12702554 YP_006112891.1 CDS UM146_20245 NC_017632.1 4229727 4229969 D hypothetical protein 4229727..4229969 Escherichia coli UM146 12702555 YP_006112892.1 CDS UM146_20250 NC_017632.1 4230084 4230722 D hypothetical protein 4230084..4230722 Escherichia coli UM146 12702556 YP_006112893.1 CDS UM146_20255 NC_017632.1 4230719 4231456 D hypothetical protein 4230719..4231456 Escherichia coli UM146 12702557 YP_006112894.1 CDS UM146_20260 NC_017632.1 4231456 4233552 D putative porin 4231456..4233552 Escherichia coli UM146 12702558 YP_006112895.1 CDS UM146_20265 NC_017632.1 4233937 4234095 D hypothetical protein 4233937..4234095 Escherichia coli UM146 12702559 YP_006112896.1 CDS UM146_20270 NC_017632.1 4234092 4234502 D COG3223 Predicted membrane protein; phosphate-starvation-inducible protein PsiE 4234092..4234502 Escherichia coli UM146 12702560 YP_006112897.1 CDS malG NC_017632.1 4234596 4235486 R COG3833 ABC-type maltose transport systems, permease component; maltose transporter permease complement(4234596..4235486) Escherichia coli UM146 12702561 YP_006112898.1 CDS malF NC_017632.1 4235501 4237045 R COG1175 ABC-type sugar transport systems, permease components; maltose transporter membrane protein complement(4235501..4237045) Escherichia coli UM146 12702562 YP_006112899.1 CDS malE NC_017632.1 4237199 4238389 R COG2182 Maltose-binding periplasmic proteins/domains; maltose ABC transporter periplasmic protein complement(4237199..4238389) Escherichia coli UM146 12702563 YP_006112900.1 CDS UM146_20290 NC_017632.1 4238482 4238577 R hypothetical protein complement(4238482..4238577) Escherichia coli UM146 12702564 YP_006112901.1 CDS UM146_20295 NC_017632.1 4238754 4239869 D COG3839 ABC-type sugar transport systems, ATPase components; maltose/maltodextrin transporter ATP-binding protein 4238754..4239869 Escherichia coli UM146 12702565 YP_006112902.1 CDS lamB NC_017632.1 4239944 4241281 D COG4580 Maltoporin (phage lambda and maltose receptor); maltoporin 4239944..4241281 Escherichia coli UM146 12702566 YP_006112903.1 CDS UM146_20305 NC_017632.1 4241604 4242524 D maltose regulon periplasmic protein 4241604..4242524 Escherichia coli UM146 12702567 YP_006112904.1 CDS ubiC NC_017632.1 4242703 4243200 D COG3161 4-hydroxybenzoate synthetase (chorismate lyase); chorismate pyruvate lyase 4242703..4243200 Escherichia coli UM146 12702568 YP_006112905.1 CDS ubiA NC_017632.1 4243213 4244085 D COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; 4-hydroxybenzoate octaprenyltransferase 4243213..4244085 Escherichia coli UM146 12702569 YP_006112906.1 CDS UM146_20320 NC_017632.1 4244238 4246661 R COG2937 Glycerol-3-phosphate O-acyltransferase; glycerol-3-phosphate acyltransferase complement(4244238..4246661) Escherichia coli UM146 12702570 YP_006112907.1 CDS UM146_20325 NC_017632.1 4246832 4247200 D COG0818 Diacylglycerol kinase; diacylglycerol kinase 4246832..4247200 Escherichia coli UM146 12702571 YP_006112908.1 CDS UM146_20330 NC_017632.1 4247310 4247918 D COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); LexA repressor 4247310..4247918 Escherichia coli UM146 12702572 YP_006112909.1 CDS UM146_20335 NC_017632.1 4247991 4249316 D COG0534 Na+-driven multidrug efflux pump; DNA-damage-inducible SOS response protein 4247991..4249316 Escherichia coli UM146 12702573 YP_006112910.1 CDS UM146_20340 NC_017632.1 4249432 4249641 D COG3237 Uncharacterized protein conserved in bacteria; putative stress-response protein 4249432..4249641 Escherichia coli UM146 12702574 YP_006112911.1 CDS UM146_20345 NC_017632.1 4249683 4250198 R COG0735 Fe2+/Zn2+ uptake regulation proteins; zinc uptake transcriptional repressor complement(4249683..4250198) Escherichia coli UM146 12702575 YP_006112912.1 CDS UM146_20350 NC_017632.1 4250354 4251349 D COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase A 4250354..4251349 Escherichia coli UM146 12702576 YP_006112913.1 CDS pspG NC_017632.1 4251483 4251725 D phage shock protein G 4251483..4251725 Escherichia coli UM146 12702577 YP_006112914.1 CDS UM146_20360 NC_017632.1 4251890 4252873 R COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; quinone oxidoreductase complement(4251890..4252873) Escherichia coli UM146 12702578 YP_006112915.1 CDS UM146_20365 NC_017632.1 4252979 4255027 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; putative oxidoreductase complement(4252979..4255027) Escherichia coli UM146 12702579 YP_006112916.1 CDS UM146_20370 NC_017632.1 4255017 4256417 R COG0477 Permeases of the major facilitator superfamily; putative transmembrane transport protein complement(4255017..4256417) Escherichia coli UM146 12702580 YP_006112917.1 CDS UM146_20375 NC_017632.1 4256508 4257287 R COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase complement(4256508..4257287) Escherichia coli UM146 12702581 YP_006112918.1 CDS UM146_20380 NC_017632.1 4257280 4258851 R COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; putative Acyl CoA:acetate/3-ketoacid CoA transferase, alpha and beta subunits complement(4257280..4258851) Escherichia coli UM146 12702582 YP_006112919.1 CDS UM146_20385 NC_017632.1 4259107 4260141 D COG1609 Transcriptional regulators; LacI family transcriptional regulator 4259107..4260141 Escherichia coli UM146 12702583 YP_006112920.1 CDS UM146_20390 NC_017632.1 4260214 4261629 D COG0305 Replicative DNA helicase; replicative DNA helicase 4260214..4261629 Escherichia coli UM146 12702584 YP_006112921.1 CDS alr NC_017632.1 4261682 4262761 D COG0787 Alanine racemase; alanine racemase 4261682..4262761 Escherichia coli UM146 12702585 YP_006112922.1 CDS UM146_20400 NC_017632.1 4262784 4263341 D COG3201 Nicotinamide mononucleotide transporter; putative transporter 4262784..4263341 Escherichia coli UM146 12702586 YP_006112923.1 CDS UM146_20405 NC_017632.1 4263314 4264336 D COG1056 Nicotinamide mononucleotide adenylyltransferase; putative transcriptional regulator 4263314..4264336 Escherichia coli UM146 12702587 YP_006112924.1 CDS UM146_20410 NC_017632.1 4264418 4265611 D COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase 4264418..4265611 Escherichia coli UM146 12702588 YP_006112925.1 CDS sucA NC_017632.1 4265793 4268537 D COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes; 2-oxoglutarate dehydrogenase E1 component 4265793..4268537 Escherichia coli UM146 12702589 YP_006112926.1 CDS UM146_20420 NC_017632.1 4268570 4269724 D COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide succinyltransferase (E2 component) 4268570..4269724 Escherichia coli UM146 12702590 YP_006112927.1 CDS UM146_20425 NC_017632.1 4269736 4271154 D COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; putative dihydrolipoyl dehydrogenase, E3 component (lpd-like) protein 4269736..4271154 Escherichia coli UM146 12702591 YP_006112928.1 CDS UM146_20430 NC_017632.1 4271176 4272345 D COG0045 Succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase beta chain 4271176..4272345 Escherichia coli UM146 12702592 YP_006112929.1 CDS UM146_20435 NC_017632.1 4272358 4273230 D COG0074 Succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase alpha chain 4272358..4273230 Escherichia coli UM146 12702593 YP_006112930.1 CDS UM146_20440 NC_017632.1 4273436 4274941 D COG0471 Di- and tricarboxylate transporters; hypothetical protein 4273436..4274941 Escherichia coli UM146 12702594 YP_006112931.1 CDS UM146_20445 NC_017632.1 4274953 4276026 D COG2055 Malate/L-lactate dehydrogenases; L-lactate dehydrogenase 4274953..4276026 Escherichia coli UM146 12702595 YP_006112932.1 CDS UM146_20450 NC_017632.1 4276015 4277373 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; C4-dicarboxylate transport transcriptional regulatory protein complement(4276015..4277373) Escherichia coli UM146 12702596 YP_006112933.1 CDS UM146_20455 NC_017632.1 4277366 4279186 R COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; putative C4-dicarboxylate transport sensor protein (dctB-like) complement(4277366..4279186) Escherichia coli UM146 12702597 YP_006112934.1 CDS aphA NC_017632.1 4279463 4280176 D COG3700 Acid phosphatase (class B); acid phosphatase/phosphotransferase 4279463..4280176 Escherichia coli UM146 12702598 YP_006112935.1 CDS UM146_20465 NC_017632.1 4280287 4280703 D COG0432 Uncharacterized conserved protein; hypothetical protein 4280287..4280703 Escherichia coli UM146 12702599 YP_006112936.1 CDS UM146_20470 NC_017632.1 4280707 4281063 D COG2315 Uncharacterized protein conserved in bacteria; hypothetical protein 4280707..4281063 Escherichia coli UM146 12702600 YP_006112937.1 CDS uvrA NC_017632.1 4281098 4283920 R COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A complement(4281098..4283920) Escherichia coli UM146 12702601 YP_006112938.1 CDS UM146_20480 NC_017632.1 4284174 4284710 D COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein 4284174..4284710 Escherichia coli UM146 12702602 YP_006112939.1 CDS UM146_20485 NC_017632.1 4284809 4285090 R hypothetical protein complement(4284809..4285090) Escherichia coli UM146 12702603 YP_006112940.1 CDS UM146_20490 NC_017632.1 4285519 4287105 D COG4943 Predicted signal transduction protein containing sensor and EAL domains; putative signal transduction protein (EAL domain containing protein) 4285519..4287105 Escherichia coli UM146 12702604 YP_006112941.1 CDS UM146_20495 NC_017632.1 4287108 4287431 R COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator SoxS complement(4287108..4287431) Escherichia coli UM146 12702605 YP_006112942.1 CDS UM146_20500 NC_017632.1 4287517 4287981 D COG0789 Predicted transcriptional regulators; DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing 4287517..4287981 Escherichia coli UM146 12702606 YP_006112943.1 CDS UM146_20505 NC_017632.1 4288528 4289877 D COG2252 Permeases; putative permease 4288528..4289877 Escherichia coli UM146 12702607 YP_006112944.1 CDS UM146_20510 NC_017632.1 4290028 4291677 D COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; putative cation/proton antiporter 4290028..4291677 Escherichia coli UM146 12702608 YP_006112945.1 CDS UM146_20515 NC_017632.1 4291713 4292597 R COG0583 Transcriptional regulator; putative transcriptional regulator (LysR family) protein complement(4291713..4292597) Escherichia coli UM146 12702609 YP_006112946.1 CDS UM146_20520 NC_017632.1 4292701 4293111 D COG1380 Putative effector of murein hydrolase LrgA; hypothetical protein 4292701..4293111 Escherichia coli UM146 12702610 YP_006112947.1 CDS UM146_20525 NC_017632.1 4293104 4293793 D COG1346 Putative effector of murein hydrolase; hypothetical protein 4293104..4293793 Escherichia coli UM146 12702611 YP_006112948.1 CDS actP NC_017632.1 4293832 4295481 R COG4147 Predicted symporter; acetate permease complement(4293832..4295481) Escherichia coli UM146 12702612 YP_006112949.1 CDS UM146_20535 NC_017632.1 4295478 4295792 R COG3162 Predicted membrane protein; hypothetical protein complement(4295478..4295792) Escherichia coli UM146 12702613 YP_006112950.1 CDS UM146_20540 NC_017632.1 4296084 4298042 R COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; acetyl-CoA synthetase complement(4296084..4298042) Escherichia coli UM146 12702614 YP_006112951.1 CDS nrfA NC_017632.1 4298434 4299870 D COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; cytochrome c552 4298434..4299870 Escherichia coli UM146 12702615 YP_006112952.1 CDS UM146_20550 NC_017632.1 4299915 4300481 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; cytochrome c nitrite reductase pentaheme subunit 4299915..4300481 Escherichia coli UM146 12702616 YP_006112953.1 CDS UM146_20555 NC_017632.1 4300478 4301149 D COG0437 Fe-S-cluster-containing hydrogenase components 1; formate-dependent nitrite reductase, 4Fe4S subunit 4300478..4301149 Escherichia coli UM146 12702617 YP_006112954.1 CDS UM146_20560 NC_017632.1 4301146 4302102 D COG3301 Formate-dependent nitrite reductase, membrane component; formate-dependent nitrite reductase, membrane subunit 4301146..4302102 Escherichia coli UM146 12702618 YP_006112955.1 CDS UM146_20565 NC_017632.1 4302233 4303840 D COG1138 Cytochrome c biogenesis factor; heme lyase subunit NrfE 4302233..4303840 Escherichia coli UM146 12702619 YP_006112956.1 CDS UM146_20570 NC_017632.1 4303833 4304216 D COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; formate-dependent nitrite reductase complex subunit NrfF 4303833..4304216 Escherichia coli UM146 12702620 YP_006112957.1 CDS UM146_20575 NC_017632.1 4304213 4304809 D COG4235 Cytochrome c biogenesis factor; formate-dependent nitrite reductase complex subunit NrfG 4304213..4304809 Escherichia coli UM146 12702621 YP_006112958.1 CDS gltP NC_017632.1 4305152 4306465 D COG1301 Na+/H+-dicarboxylate symporters; glutamate/aspartate:proton symporter 4305152..4306465 Escherichia coli UM146 12702622 YP_006112959.1 CDS UM146_20585 NC_017632.1 4306613 4307302 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(4306613..4307302) Escherichia coli UM146 12702623 YP_006112960.1 CDS UM146_20590 NC_017632.1 4307413 4308117 R COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; putative ABC transporter ATP-binding protein (yddO) complement(4307413..4308117) Escherichia coli UM146 12702624 YP_006112961.1 CDS UM146_20595 NC_017632.1 4308104 4308940 R COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; putative ABC transporter transporter, ATP-binding protein complement(4308104..4308940) Escherichia coli UM146 12702625 YP_006112962.1 CDS UM146_20600 NC_017632.1 4308933 4309766 R COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; putative dipeptide/nickel transporter, Inner membrane permease subunit (yddQ) complement(4308933..4309766) Escherichia coli UM146 12702626 YP_006112963.1 CDS UM146_20605 NC_017632.1 4309766 4310815 R COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; putative dipeptide/nickel transporter, Inner membrane permease subunit precursor (yddR) complement(4309766..4310815) Escherichia coli UM146 12702627 YP_006112964.1 CDS UM146_20610 NC_017632.1 4310915 4312483 R COG0747 ABC-type dipeptide transport system, periplasmic component; putative ABC-type dipeptide transport system, periplasmic component complement(4310915..4312483) Escherichia coli UM146 12702628 YP_006112965.1 CDS UM146_20615 NC_017632.1 4312858 4314537 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-H, selenopolypeptide subunit complement(4312858..4314537) Escherichia coli UM146 12702629 YP_006112966.1 CDS UM146_20620 NC_017632.1 4314586 4315005 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-H, selenopolypeptide subunit complement(4314586..4315005) Escherichia coli UM146 12702630 YP_006112967.1 CDS UM146_20625 NC_017632.1 4315203 4316669 R COG1538 Outer membrane protein; putative outer membrane efflux protein MdtP complement(4315203..4316669) Escherichia coli UM146 12702631 YP_006112968.1 CDS UM146_20630 NC_017632.1 4316666 4318717 R COG1289 Predicted membrane protein; multidrug efflux system protein MdtO complement(4316666..4318717) Escherichia coli UM146 12702632 YP_006112969.1 CDS UM146_20635 NC_017632.1 4318717 4319748 R COG1566 Multidrug resistance efflux pump; multidrug resistance protein MdtN complement(4318717..4319748) Escherichia coli UM146 12702633 YP_006112970.1 CDS UM146_20640 NC_017632.1 4319767 4320042 R hypothetical protein complement(4319767..4320042) Escherichia coli UM146 12702634 YP_006112971.1 CDS UM146_20645 NC_017632.1 4320250 4322235 R COG2015 Alkyl sulfatase and related hydrolases; putative alkyl sulfatase complement(4320250..4322235) Escherichia coli UM146 12702635 YP_006112972.1 CDS UM146_20650 NC_017632.1 4322510 4323439 R COG1940 Transcriptional regulator/sugar kinase; D-allose kinase complement(4322510..4323439) Escherichia coli UM146 12702636 YP_006112973.1 CDS UM146_20655 NC_017632.1 4323423 4324118 R COG0036 Pentose-5-phosphate-3-epimerase; allulose-6-phosphate 3-epimerase complement(4323423..4324118) Escherichia coli UM146 12702637 YP_006112974.1 CDS UM146_20670 NC_017632.1 4325088 4326620 R COG1129 ABC-type sugar transport system, ATPase component; D-allose transporter ATP-binding protein complement(4325088..4326620) Escherichia coli UM146 12702638 YP_006112975.1 CDS UM146_20675 NC_017632.1 4326747 4327682 R COG1879 ABC-type sugar transport system, periplasmic component; D-allose transporter subunit complement(4326747..4327682) Escherichia coli UM146 12702639 YP_006112976.1 CDS UM146_20680 NC_017632.1 4327741 4328631 R COG1737 Transcriptional regulators; DNA-binding transcriptional repressor RpiR complement(4327741..4328631) Escherichia coli UM146 12702640 YP_006112977.1 CDS UM146_20685 NC_017632.1 4328989 4329438 D COG0698 Ribose 5-phosphate isomerase RpiB; ribose-5-phosphate isomerase B 4328989..4329438 Escherichia coli UM146 12702641 YP_006112978.1 CDS UM146_20690 NC_017632.1 4329507 4329836 D hypothetical protein 4329507..4329836 Escherichia coli UM146 12702642 YP_006112979.1 CDS phnP NC_017632.1 4329864 4330622 R COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; carbon-phosphorus lyase complex accessory protein complement(4329864..4330622) Escherichia coli UM146 12702643 YP_006112980.1 CDS UM146_20700 NC_017632.1 4330624 4331058 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; aminoalkylphosphonic acid N-acetyltransferase complement(4330624..4331058) Escherichia coli UM146 12702644 YP_006112981.1 CDS UM146_20705 NC_017632.1 4331045 4331602 R COG3709 Uncharacterized component of phosphonate metabolism; ribose 1,5-bisphosphokinase complement(4331045..4331602) Escherichia coli UM146 12702645 YP_006112982.1 CDS UM146_20710 NC_017632.1 4331602 4332738 R COG3454 Metal-dependent hydrolase involved in phosphonate metabolism; carbon-phosphorus lyase complex subunit complement(4331602..4332738) Escherichia coli UM146 12702646 YP_006112983.1 CDS UM146_20715 NC_017632.1 4332735 4333415 R COG4778 ABC-type phosphonate transport system, ATPase component; phosphonates transport ATP-binding protein PhnL complement(4332735..4333415) Escherichia coli UM146 12702647 YP_006112984.1 CDS phnK NC_017632.1 4333526 4334284 R COG4107 ABC-type phosphonate transport system, ATPase component; phosphonate C-P lyase system protein PhnK complement(4333526..4334284) Escherichia coli UM146 12702648 YP_006112985.1 CDS UM146_20725 NC_017632.1 4334281 4335126 R COG3627 Uncharacterized enzyme of phosphonate metabolism; carbon-phosphorus lyase complex subunit complement(4334281..4335126) Escherichia coli UM146 12702649 YP_006112986.1 CDS UM146_20730 NC_017632.1 4335119 4336183 R COG3626 Uncharacterized enzyme of phosphonate metabolism; carbon-phosphorus lyase complex subunit PhnI complement(4335119..4336183) Escherichia coli UM146 12702650 YP_006112987.1 CDS phnH NC_017632.1 4336183 4336767 R COG3625 Uncharacterized enzyme of phosphonate metabolism; carbon-phosphorus lyase complex subunit complement(4336183..4336767) Escherichia coli UM146 12702651 YP_006112988.1 CDS UM146_20740 NC_017632.1 4336764 4337216 R COG3624 Uncharacterized enzyme of phosphonate metabolism; carbon-phosphorus lyase complex subunit complement(4336764..4337216) Escherichia coli UM146 12702652 YP_006112989.1 CDS UM146_20745 NC_017632.1 4337217 4337942 R COG2188 Transcriptional regulators; phosphonate metabolism transcriptional regulator PhnF complement(4337217..4337942) Escherichia coli UM146 12702653 YP_006112990.1 CDS UM146_20750 NC_017632.1 4337963 4338793 R COG3639 ABC-type phosphate/phosphonate transport system, permease component; phosphonates transport system, permease protein complement(4337963..4338793) Escherichia coli UM146 12702654 YP_006112991.1 CDS UM146_20755 NC_017632.1 4338848 4339864 R COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component; phosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily protein complement(4338848..4339864) Escherichia coli UM146 12702655 YP_006112992.1 CDS UM146_20760 NC_017632.1 4339889 4340677 R COG3638 ABC-type phosphate/phosphonate transport system, ATPase component; phosphonate/organophosphate ester transporter subunit complement(4339889..4340677) Escherichia coli UM146 12702656 YP_006112993.1 CDS UM146_20765 NC_017632.1 4340627 4340725 D hypothetical protein 4340627..4340725 Escherichia coli UM146 12702657 YP_006112994.1 CDS UM146_20770 NC_017632.1 4340810 4341253 R COG2764 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4340810..4341253) Escherichia coli UM146 12702658 YP_006112995.1 CDS UM146_20775 NC_017632.1 4341413 4341826 R COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; putative alkylphosphonate uptake protein in phosphonate metabolism complement(4341413..4341826) Escherichia coli UM146 12702659 YP_006112996.1 CDS UM146_20780 NC_017632.1 4342151 4344379 D COG0699 Predicted GTPases (dynamin-related); hypothetical protein 4342151..4344379 Escherichia coli UM146 12702660 YP_006112997.1 CDS UM146_20785 NC_017632.1 4344376 4345254 D hypothetical protein 4344376..4345254 Escherichia coli UM146 12702661 YP_006112998.1 CDS UM146_20790 NC_017632.1 4345518 4347020 D COG0477 Permeases of the major facilitator superfamily; proline/glycine betaine transporter 4345518..4347020 Escherichia coli UM146 12702662 YP_006112999.1 CDS UM146_20795 NC_017632.1 4347197 4348297 R COG0642 Signal transduction histidine kinase; sensor protein BasS/PmrB complement(4347197..4348297) Escherichia coli UM146 12702663 YP_006113000.1 CDS UM146_20800 NC_017632.1 4348298 4348966 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator BasR complement(4348298..4348966) Escherichia coli UM146 12702664 YP_006113001.1 CDS UM146_20805 NC_017632.1 4348963 4350606 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; putative cell division protein complement(4348963..4350606) Escherichia coli UM146 12702665 YP_006113002.1 CDS UM146_20810 NC_017632.1 4350710 4352047 R COG0531 Amino acid transporters; arginine:agmatin antiporter complement(4350710..4352047) Escherichia coli UM146 12702666 YP_006113003.1 CDS UM146_20815 NC_017632.1 4352184 4352945 R COG2207 AraC-type DNA-binding domain-containing proteins; putative ARAC-type regulatory protein complement(4352184..4352945) Escherichia coli UM146 12702667 YP_006113004.1 CDS UM146_20820 NC_017632.1 4353281 4355548 R COG1982 Arginine/lysine/ornithine decarboxylases; biodegradative arginine decarboxylase complement(4353281..4355548) Escherichia coli UM146 12702668 YP_006113005.1 CDS UM146_20825 NC_017632.1 4355747 4356655 R COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator MelR complement(4355747..4356655) Escherichia coli UM146 12702669 YP_006113006.1 CDS UM146_20830 NC_017632.1 4356654 4356848 D hypothetical protein 4356654..4356848 Escherichia coli UM146 12702670 YP_006113007.1 CDS UM146_20835 NC_017632.1 4356938 4358293 D COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; alpha-galactosidase, NAD(P)-binding protein 4356938..4358293 Escherichia coli UM146 12702671 YP_006113008.1 CDS UM146_20840 NC_017632.1 4358290 4358940 R COG3647 Predicted membrane protein; hypothetical protein complement(4358290..4358940) Escherichia coli UM146 12702672 YP_006113009.1 CDS UM146_20845 NC_017632.1 4359063 4360709 R COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; anaerobic class I fumarate hydratase complement(4359063..4360709) Escherichia coli UM146 12702673 YP_006113010.1 CDS UM146_20850 NC_017632.1 4360787 4362127 R COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter complement(4360787..4362127) Escherichia coli UM146 12702674 YP_006113011.1 CDS UM146_20855 NC_017632.1 4362698 4363417 R COG4565 Response regulator of citrate/malate metabolism; DNA-binding transcriptional activator DcuR complement(4362698..4363417) Escherichia coli UM146 12702675 YP_006113012.1 CDS UM146_20860 NC_017632.1 4363414 4365045 R COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; sensory histidine kinase DcuS complement(4363414..4365045) Escherichia coli UM146 12702676 YP_006113013.1 CDS UM146_20865 NC_017632.1 4365226 4365456 D COG3592 Uncharacterized conserved protein; hypothetical protein 4365226..4365456 Escherichia coli UM146 12702677 YP_006113014.1 CDS UM146_20870 NC_017632.1 4365468 4365740 D COG2388 Predicted acetyltransferase; putative acyltransferase 4365468..4365740 Escherichia coli UM146 12702678 YP_006113015.1 CDS UM146_20875 NC_017632.1 4366058 4366264 D hypothetical protein 4366058..4366264 Escherichia coli UM146 12702679 YP_006113016.1 CDS UM146_20880 NC_017632.1 4366292 4366465 D hypothetical protein 4366292..4366465 Escherichia coli UM146 12702680 YP_006113017.1 CDS UM146_20885 NC_017632.1 4366584 4368101 R COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase complement(4366584..4368101) Escherichia coli UM146 12702681 YP_006113018.1 CDS UM146_20890 NC_017632.1 4368338 4369795 R COG3104 Dipeptide/tripeptide permease; putative transporter complement(4368338..4369795) Escherichia coli UM146 12702682 YP_006113019.1 CDS UM146_20895 NC_017632.1 4369854 4372001 R COG1982 Arginine/lysine/ornithine decarboxylases; lysine decarboxylase 1 complement(4369854..4372001) Escherichia coli UM146 12702683 YP_006113020.1 CDS cadB NC_017632.1 4372081 4373415 R COG0531 Amino acid transporters; lysine/cadaverine antiporter complement(4372081..4373415) Escherichia coli UM146 12702684 YP_006113021.1 CDS UM146_20905 NC_017632.1 4373781 4375319 R COG3710 DNA-binding winged-HTH domains; DNA-binding transcriptional activator CadC complement(4373781..4375319) Escherichia coli UM146 12702685 YP_006113022.1 CDS UM146_20910 NC_017632.1 4376109 4376228 D hypothetical protein 4376109..4376228 Escherichia coli UM146 12702687 YP_006113023.1 CDS UM146_20915 NC_017632.1 4376118 4376693 R COG1309 Transcriptional regulator; putative transcriptional regulator complement(4376118..4376693) Escherichia coli UM146 12702688 YP_006113024.1 CDS dipZ NC_017632.1 4376730 4378427 R COG4232 Thiol:disulfide interchange protein; thiol:disulfide interchange protein complement(4376730..4378427) Escherichia coli UM146 12702689 YP_006113025.1 CDS UM146_20925 NC_017632.1 4378403 4378741 R COG1324 Uncharacterized protein involved in tolerance to divalent cations; divalent-cation tolerance protein CutA complement(4378403..4378741) Escherichia coli UM146 12702690 YP_006113026.1 CDS UM146_20930 NC_017632.1 4378857 4380158 R COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter complement(4378857..4380158) Escherichia coli UM146 12702691 YP_006113027.1 CDS aspA NC_017632.1 4380276 4381712 R COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase complement(4380276..4381712) Escherichia coli UM146 12702692 YP_006113028.1 CDS fxsA NC_017632.1 4382049 4382525 D COG3030 Protein affecting phage T7 exclusion by the F plasmid; FxsA protein 4382049..4382525 Escherichia coli UM146 12702693 YP_006113029.1 CDS UM146_20945 NC_017632.1 4382541 4383797 R COG0531 Amino acid transporters; inner membrane protein YjeH complement(4382541..4383797) Escherichia coli UM146 12702694 YP_006113030.1 CDS groES NC_017632.1 4384072 4384365 D COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES 4384072..4384365 Escherichia coli UM146 12702695 YP_006113031.1 CDS groEL NC_017632.1 4384409 4386055 D COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL 4384409..4386055 Escherichia coli UM146 12702696 YP_006113032.1 CDS UM146_20960 NC_017632.1 4386193 4386546 D hypothetical protein 4386193..4386546 Escherichia coli UM146 12702697 YP_006113033.1 CDS UM146_20965 NC_017632.1 4386596 4387465 R COG0752 Glycyl-tRNA synthetase, alpha subunit; hypothetical protein complement(4386596..4387465) Escherichia coli UM146 12702698 YP_006113034.1 CDS UM146_20970 NC_017632.1 4387700 4388728 R COG1509 Lysine 2,3-aminomutase; putative lysine aminomutase complement(4387700..4388728) Escherichia coli UM146 12702699 YP_006113035.1 CDS UM146_20975 NC_017632.1 4388770 4389336 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 4388770..4389336 Escherichia coli UM146 12702700 YP_006113036.1 CDS UM146_20980 NC_017632.1 4389391 4389513 D entericidin A 4389391..4389513 Escherichia coli UM146 12702701 YP_006113037.1 CDS UM146_20985 NC_017632.1 4389624 4389770 D COG5510 Predicted small secreted protein; entericidin B membrane lipoprotein 4389624..4389770 Escherichia coli UM146 12702702 YP_006113038.1 CDS UM146_20990 NC_017632.1 4389946 4390263 D COG2076 Membrane transporters of cations and cationic drugs; quaternary ammonium compound-resistance protein SugE 4389946..4390263 Escherichia coli UM146 12702703 YP_006113039.1 CDS UM146_20995 NC_017632.1 4390260 4390793 R COG3040 Bacterial lipocalin; outer membrane lipoprotein Blc complement(4390260..4390793) Escherichia coli UM146 12702704 YP_006113040.1 CDS ampC NC_017632.1 4390882 4392015 R COG1680 Beta-lactamase class C and other penicillin binding proteins; beta-lactamase complement(4390882..4392015) Escherichia coli UM146 12702705 YP_006113041.1 CDS UM146_21005 NC_017632.1 4392078 4392437 R COG3080 Fumarate reductase subunit D; fumarate reductase subunit D complement(4392078..4392437) Escherichia coli UM146 12702706 YP_006113042.1 CDS UM146_21010 NC_017632.1 4392448 4392843 R COG3029 Fumarate reductase subunit C; fumarate reductase subunit C complement(4392448..4392843) Escherichia coli UM146 12702707 YP_006113043.1 CDS UM146_21015 NC_017632.1 4392854 4393588 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit complement(4392854..4393588) Escherichia coli UM146 12702708 YP_006113044.1 CDS UM146_21020 NC_017632.1 4393581 4395389 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase flavoprotein subunit complement(4393581..4395389) Escherichia coli UM146 12702709 YP_006113045.1 CDS UM146_21025 NC_017632.1 4395714 4396691 D COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 4395714..4396691 Escherichia coli UM146 12702710 YP_006113046.1 CDS UM146_21030 NC_017632.1 4396910 4398412 D COG0531 Amino acid transporters; putative transporter 4396910..4398412 Escherichia coli UM146 12702711 YP_006113047.1 CDS UM146_21035 NC_017632.1 4398475 4398789 D hypothetical protein 4398475..4398789 Escherichia coli UM146 12702712 YP_006113048.1 CDS UM146_21040 NC_017632.1 4398786 4399100 D hypothetical protein 4398786..4399100 Escherichia coli UM146 12702713 YP_006113049.1 CDS UM146_21045 NC_017632.1 4399131 4402454 R COG3264 Small-conductance mechanosensitive channel; hypothetical protein complement(4399131..4402454) Escherichia coli UM146 12702714 YP_006113050.1 CDS psd NC_017632.1 4402476 4403444 R COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase complement(4402476..4403444) Escherichia coli UM146 12702715 YP_006113051.1 CDS UM146_21055 NC_017632.1 4403541 4404593 R COG1162 Predicted GTPases; ribosome-associated GTPase complement(4403541..4404593) Escherichia coli UM146 12702716 YP_006113052.1 CDS UM146_21060 NC_017632.1 4404688 4405233 D COG1949 Oligoribonuclease (3'->5' exoribonuclease); oligoribonuclease 4404688..4405233 Escherichia coli UM146 12702717 YP_006113053.1 CDS UM146_21065 NC_017632.1 4406013 4407152 R COG1600 Uncharacterized Fe-S protein; putative electron transport protein YjeS complement(4406013..4407152) Escherichia coli UM146 12702721 YP_006113054.1 CDS UM146_21070 NC_017632.1 4407151 4408698 D COG0062 Uncharacterized conserved protein; hypothetical protein 4407151..4408698 Escherichia coli UM146 12702722 YP_006113055.1 CDS UM146_21075 NC_017632.1 4408670 4409131 D COG0802 Predicted ATPase or kinase; putative ATPase 4408670..4409131 Escherichia coli UM146 12702723 YP_006113056.1 CDS UM146_21080 NC_017632.1 4409150 4410487 D COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase II 4409150..4410487 Escherichia coli UM146 12702724 YP_006113057.1 CDS mutL NC_017632.1 4410497 4412344 D COG0323 DNA mismatch repair enzyme (predicted ATPase); DNA mismatch repair protein 4410497..4412344 Escherichia coli UM146 12702725 YP_006113058.1 CDS miaA NC_017632.1 4412337 4413287 D COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 4412337..4413287 Escherichia coli UM146 12702726 YP_006113059.1 CDS hfq NC_017632.1 4413373 4413681 D COG1923 Uncharacterized host factor I protein; RNA-binding protein Hfq 4413373..4413681 Escherichia coli UM146 12702727 YP_006113060.1 CDS UM146_21100 NC_017632.1 4413757 4415037 D COG2262 GTPases; putative GTPase HflX 4413757..4415037 Escherichia coli UM146 12702729 YP_006113061.1 CDS UM146_21105 NC_017632.1 4415123 4416382 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; FtsH protease regulator HflK 4415123..4416382 Escherichia coli UM146 12702731 YP_006113062.1 CDS UM146_21110 NC_017632.1 4416385 4417389 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; FtsH protease regulator HflC 4416385..4417389 Escherichia coli UM146 12702732 YP_006113063.1 CDS UM146_21115 NC_017632.1 4417471 4417668 D COG3242 Uncharacterized protein conserved in bacteria; hypothetical protein 4417471..4417668 Escherichia coli UM146 12702733 YP_006113064.1 CDS UM146_21120 NC_017632.1 4417772 4417966 D COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase 4417772..4417966 Escherichia coli UM146 12702734 YP_006113065.1 CDS UM146_21125 NC_017632.1 4417990 4419069 D COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase 4417990..4419069 Escherichia coli UM146 12702735 YP_006113066.1 CDS UM146_21130 NC_017632.1 4419274 4419699 D COG1959 Predicted transcriptional regulator; transcriptional repressor NsrR 4419274..4419699 Escherichia coli UM146 12702736 YP_006113067.1 CDS UM146_21135 NC_017632.1 4419738 4422179 D COG0557 Exoribonuclease R; exoribonuclease R 4419738..4422179 Escherichia coli UM146 12702737 YP_006113068.1 CDS UM146_21140 NC_017632.1 4422271 4423002 D COG0566 rRNA methylases; 23S rRNA (guanosine-2'-O-)-methyltransferase 4422271..4423002 Escherichia coli UM146 12702738 YP_006113069.1 CDS UM146_21145 NC_017632.1 4423128 4423529 D COG3789 Uncharacterized protein conserved in bacteria; putative cytoplasmic protein 4423128..4423529 Escherichia coli UM146 12702739 YP_006113070.1 CDS UM146_21150 NC_017632.1 4423548 4424246 D COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription; putative transcriptional regulator effector protein 4423548..4424246 Escherichia coli UM146 12702740 YP_006113071.1 CDS UM146_21155 NC_017632.1 4424296 4424955 D hypothetical protein 4424296..4424955 Escherichia coli UM146 12702741 YP_006113072.1 CDS UM146_21160 NC_017632.1 4424973 4425371 D COG3766 Predicted membrane protein; putative inner membrane protein 4424973..4425371 Escherichia coli UM146 12702742 YP_006113073.1 CDS UM146_21165 NC_017632.1 4425381 4426019 D hypothetical protein 4425381..4426019 Escherichia coli UM146 12702743 YP_006113074.1 CDS UM146_21170 NC_017632.1 4426022 4427185 D COG0754 Glutathionylspermidine synthase; putative synthetase/amidase 4426022..4427185 Escherichia coli UM146 12702744 YP_006113075.1 CDS UM146_21175 NC_017632.1 4427269 4428894 D COG1960 Acyl-CoA dehydrogenases; isovaleryl CoA dehydrogenase 4427269..4428894 Escherichia coli UM146 12702745 YP_006113076.1 CDS UM146_21180 NC_017632.1 4429011 4429298 R hypothetical protein complement(4429011..4429298) Escherichia coli UM146 12702746 YP_006113077.1 CDS UM146_21185 NC_017632.1 4429435 4429764 R putative biofilm stress and motility protein A complement(4429435..4429764) Escherichia coli UM146 12702747 YP_006113078.1 CDS UM146_21190 NC_017632.1 4429946 4430695 D COG1073 Hydrolases of the alpha/beta superfamily; esterase 4429946..4430695 Escherichia coli UM146 12702748 YP_006113079.1 CDS UM146_21195 NC_017632.1 4430692 4431447 R COG1349 Transcriptional regulators of sugar metabolism; transcriptional repressor UlaR complement(4430692..4431447) Escherichia coli UM146 12702749 YP_006113080.1 CDS UM146_21200 NC_017632.1 4431555 4432619 R COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; putative L-ascorbate 6-phosphate lactonase complement(4431555..4432619) Escherichia coli UM146 12702750 YP_006113081.1 CDS ulaA NC_017632.1 4432974 4434371 D COG3037 Uncharacterized protein conserved in bacteria; PTS system ascorbate-specific transporter subunit IIC 4432974..4434371 Escherichia coli UM146 12702751 YP_006113082.1 CDS UM146_21210 NC_017632.1 4434387 4434692 D COG3414 Phosphotransferase system, galactitol-specific IIB component; L-ascorbate-specific enzyme IIB component of PTS 4434387..4434692 Escherichia coli UM146 12702752 YP_006113083.1 CDS UM146_21215 NC_017632.1 4434702 4435166 D COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); L-ascorbate-specific enzyme IIA component of PTS 4434702..4435166 Escherichia coli UM146 12702753 YP_006113084.1 CDS ulaD NC_017632.1 4435180 4435830 D COG0269 3-hexulose-6-phosphate synthase and related proteins; 3-keto-L-gulonate-6-phosphate decarboxylase 4435180..4435830 Escherichia coli UM146 12702754 YP_006113085.1 CDS UM146_21225 NC_017632.1 4435840 4436694 D COG3623 Putative L-xylulose-5-phosphate 3-epimerase; L-xylulose 5-phosphate 3-epimerase 4435840..4436694 Escherichia coli UM146 12702755 YP_006113086.1 CDS sgaE NC_017632.1 4436694 4437380 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase 4436694..4437380 Escherichia coli UM146 12702756 YP_006113087.1 CDS UM146_21235 NC_017632.1 4437509 4437784 R hypothetical protein complement(4437509..4437784) Escherichia coli UM146 12702757 YP_006113088.1 CDS rpsF NC_017632.1 4438112 4438507 D COG0360 Ribosomal protein S6; 30S ribosomal protein S6 4438112..4438507 Escherichia coli UM146 12702758 YP_006113089.1 CDS UM146_21245 NC_017632.1 4438514 4438828 D COG2965 Primosomal replication protein N; primosomal replication protein N 4438514..4438828 Escherichia coli UM146 12702759 YP_006113090.1 CDS rpsR NC_017632.1 4438833 4439060 D COG0238 Ribosomal protein S18; 30S ribosomal protein S18 4438833..4439060 Escherichia coli UM146 12702760 YP_006113091.1 CDS rplI NC_017632.1 4439102 4439551 D COG0359 Ribosomal protein L9; 50S ribosomal protein L9 4439102..4439551 Escherichia coli UM146 12702761 YP_006113092.1 CDS UM146_21260 NC_017632.1 4440151 4440444 D hypothetical protein 4440151..4440444 Escherichia coli UM146 12702762 YP_006113093.1 CDS UM146_21265 NC_017632.1 4440447 4441715 D COG3550 Uncharacterized protein related to capsule biosynthesis enzymes; hypothetical protein 4440447..4441715 Escherichia coli UM146 12702763 YP_006113094.1 CDS UM146_21270 NC_017632.1 4441858 4442943 R COG0477 Permeases of the major facilitator superfamily; putative Hexuronate transporter complement(4441858..4442943) Escherichia coli UM146 12702764 YP_006113095.1 CDS UM146_21275 NC_017632.1 4443109 4443612 R COG1662 Transposase and inactivated derivatives, IS1 family; insertion element IS1 protein insB complement(4443109..4443612) Escherichia coli UM146 12702765 YP_006113096.1 CDS UM146_21280 NC_017632.1 4443531 4443806 R COG3677 Transposase and inactivated derivatives; insertion element IS1 protein complement(4443531..4443806) Escherichia coli UM146 12702766 YP_006113097.1 CDS UM146_21285 NC_017632.1 4444005 4446077 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; putative oxidoreductase complement(4444005..4446077) Escherichia coli UM146 12702767 YP_006113098.1 CDS UM146_21290 NC_017632.1 4446074 4447615 R COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; putative CoA transferase complement(4446074..4447615) Escherichia coli UM146 12702768 YP_006113099.1 CDS UM146_21295 NC_017632.1 4447625 4448401 R COG1024 Enoyl-CoA hydratase/carnithine racemase; hypothetical protein complement(4447625..4448401) Escherichia coli UM146 12702769 YP_006113100.1 CDS UM146_21300 NC_017632.1 4448404 4449252 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); hypothetical protein complement(4448404..4449252) Escherichia coli UM146 12702770 YP_006113101.1 CDS UM146_21305 NC_017632.1 4449262 4450053 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase complement(4449262..4450053) Escherichia coli UM146 12702771 YP_006113102.1 CDS UM146_21310 NC_017632.1 4450265 4450912 D COG1309 Transcriptional regulator; putative transcriptional regulator 4450265..4450912 Escherichia coli UM146 12702772 YP_006113103.1 CDS UM146_21315 NC_017632.1 4450896 4451534 R COG3061 Cell envelope opacity-associated protein A; putative cell envelope opacity-associated protein complement(4450896..4451534) Escherichia coli UM146 12702773 YP_006113104.1 CDS UM146_21320 NC_017632.1 4451752 4452372 D COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; peptidyl-prolyl cis-trans isomerase 4451752..4452372 Escherichia coli UM146 12702774 YP_006113105.1 CDS UM146_21325 NC_017632.1 4452681 4454093 D COG1113 Gamma-aminobutyrate permease and related permeases; D-alanine/D-serine/glycine permease 4452681..4454093 Escherichia coli UM146 12702775 YP_006113106.1 CDS UM146_21330 NC_017632.1 4454138 4454800 R COG2846 Regulator of cell morphogenesis and NO signaling; iron-sulfur cluster repair di-iron protein complement(4454138..4454800) Escherichia coli UM146 12702776 YP_006113107.1 CDS UM146_21335 NC_017632.1 4454908 4455873 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(4454908..4455873) Escherichia coli UM146 12702777 YP_006113108.1 CDS UM146_21340 NC_017632.1 4455981 4456841 R COG0702 Predicted nucleoside-diphosphate-sugar epimerases; hypothetical protein complement(4455981..4456841) Escherichia coli UM146 12702778 YP_006113109.1 CDS UM146_21345 NC_017632.1 4456930 4457310 D COG1733 Predicted transcriptional regulators; hypothetical protein 4456930..4457310 Escherichia coli UM146 12702779 YP_006113110.1 CDS cpdB NC_017632.1 4457439 4459382 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein complement(4457439..4459382) Escherichia coli UM146 12702780 YP_006113111.1 CDS UM146_21355 NC_017632.1 4459572 4460312 D COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; adenosine-3'(2'),5'-bisphosphate nucleotidase 4459572..4460312 Escherichia coli UM146 12702781 YP_006113112.1 CDS UM146_21360 NC_017632.1 4460302 4460859 R COG3054 Predicted transcriptional regulator; putative transcriptional regulator complement(4460302..4460859) Escherichia coli UM146 12702782 YP_006113113.1 CDS UM146_21365 NC_017632.1 4461184 4461390 D COG1117 ABC-type phosphate transport system, ATPase component; hypothetical protein 4461184..4461390 Escherichia coli UM146 12702783 YP_006113114.1 CDS UM146_21370 NC_017632.1 4461468 4462811 R COG1253 Hemolysins and related proteins containing CBS domains; hypothetical protein complement(4461468..4462811) Escherichia coli UM146 12702784 YP_006113115.1 CDS UM146_21375 NC_017632.1 4463134 4463772 R COG0225 Peptide methionine sulfoxide reductase; methionine sulfoxide reductase A complement(4463134..4463772) Escherichia coli UM146 12702785 YP_006113116.1 CDS UM146_21380 NC_017632.1 4463978 4465711 D COG0729 Outer membrane protein; surface antigen 4463978..4465711 Escherichia coli UM146 12702786 YP_006113117.1 CDS UM146_21385 NC_017632.1 4465708 4469487 D COG2911 Uncharacterized protein conserved in bacteria; hypothetical protein 4465708..4469487 Escherichia coli UM146 12702787 YP_006113118.1 CDS UM146_21390 NC_017632.1 4469490 4469831 D COG2105 Uncharacterized conserved protein; hypothetical protein 4469490..4469831 Escherichia coli UM146 12702788 YP_006113119.1 CDS UM146_21395 NC_017632.1 4470210 4470740 R COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase complement(4470210..4470740) Escherichia coli UM146 12702789 YP_006113120.1 CDS UM146_21400 NC_017632.1 4471050 4472006 D COG1879 ABC-type sugar transport system, periplasmic component; ABC transporter periplasmic binding protein YtfQ 4471050..4472006 Escherichia coli UM146 12702790 YP_006113121.1 CDS UM146_21405 NC_017632.1 4472146 4473648 D COG1129 ABC-type sugar transport system, ATPase component; ATPase 4472146..4473648 Escherichia coli UM146 12702791 YP_006113122.1 CDS UM146_21410 NC_017632.1 4473662 4474684 D COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; ABC transporter permease 4473662..4474684 Escherichia coli UM146 12702792 YP_006113123.1 CDS UM146_21415 NC_017632.1 4474671 4475666 D COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; inner membrane ABC transporter permease YjfF 4474671..4475666 Escherichia coli UM146 12702793 YP_006113124.1 CDS UM146_21420 NC_017632.1 4475699 4476697 R COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase complement(4475699..4476697) Escherichia coli UM146 12702794 YP_006113125.1 CDS UM146_21425 NC_017632.1 4476873 4478246 D COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4476873..4478246 Escherichia coli UM146 12702795 YP_006113126.1 CDS UM146_21430 NC_017632.1 4478404 4478955 R COG3028 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4478404..4478955) Escherichia coli UM146 12702796 YP_006113127.1 CDS UM146_21435 NC_017632.1 4479048 4480400 D COG0312 Predicted Zn-dependent proteases and their inactivated homologs; peptidase PmbA 4479048..4480400 Escherichia coli UM146 12702797 YP_006113128.1 CDS UM146_21440 NC_017632.1 4480668 4480970 D COG3783 Soluble cytochrome b562; soluble cytochrome b562 4480668..4480970 Escherichia coli UM146 12702798 YP_006113129.1 CDS nrdG NC_017632.1 4481015 4481479 R COG0602 Organic radical activating enzymes; anaerobic ribonucleotide reductase-activating protein complement(4481015..4481479) Escherichia coli UM146 12702799 YP_006113130.1 CDS UM146_21450 NC_017632.1 4481637 4483775 R COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; anaerobic ribonucleoside triphosphate reductase complement(4481637..4483775) Escherichia coli UM146 12702800 YP_006113131.1 CDS UM146_21455 NC_017632.1 4484046 4484141 D hypothetical protein 4484046..4484141 Escherichia coli UM146 12702801 YP_006113132.1 CDS UM146_21460 NC_017632.1 4484169 4485824 R COG0366 Glycosidases; trehalose-6-phosphate hydrolase complement(4484169..4485824) Escherichia coli UM146 12702802 YP_006113133.1 CDS UM146_21465 NC_017632.1 4485874 4487292 R COG1264 Phosphotransferase system IIB components; trehalose(maltose)-specific PTS system components IIBC complement(4485874..4487292) Escherichia coli UM146 12702803 YP_006113134.1 CDS treR NC_017632.1 4487414 4488361 R COG1609 Transcriptional regulators; trehalose repressor complement(4487414..4488361) Escherichia coli UM146 12702804 YP_006113135.1 CDS UM146_21475 NC_017632.1 4488740 4491436 D COG0474 Cation transport ATPase; magnesium-transporting ATPase MgtA 4488740..4491436 Escherichia coli UM146 12702805 YP_006113136.1 CDS UM146_21480 NC_017632.1 4491642 4492028 R COG0251 Putative translation initiation inhibitor, yjgF family; putative endoribonuclease L-PSP complement(4491642..4492028) Escherichia coli UM146 12702806 YP_006113137.1 CDS UM146_21485 NC_017632.1 4492101 4492562 R COG1781 Aspartate carbamoyltransferase, regulatory subunit; aspartate carbamoyltransferase regulatory subunit complement(4492101..4492562) Escherichia coli UM146 12702807 YP_006113138.1 CDS pyrB NC_017632.1 4492575 4493510 R COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit complement(4492575..4493510) Escherichia coli UM146 12702808 YP_006113139.1 CDS UM146_21495 NC_017632.1 4493514 4493663 R pyrBI operon leader peptide complement(4493514..4493663) Escherichia coli UM146 12702809 YP_006113140.1 CDS UM146_21500 NC_017632.1 4493738 4494226 R COG1438 Arginine repressor; putative arginine repressor complement(4493738..4494226) Escherichia coli UM146 12702810 YP_006113141.1 CDS UM146_21505 NC_017632.1 4494342 4495745 R COG1288 Predicted membrane protein; putative C4-dicarboxylate anaerobic carrier complement(4494342..4495745) Escherichia coli UM146 12702811 YP_006113142.1 CDS UM146_21510 NC_017632.1 4495802 4496806 R COG0078 Ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(4495802..4496806) Escherichia coli UM146 12702812 YP_006113143.1 CDS UM146_21515 NC_017632.1 4496817 4497761 R COG0549 Carbamate kinase; carbamate kinase complement(4496817..4497761) Escherichia coli UM146 12702813 YP_006113144.1 CDS UM146_21520 NC_017632.1 4497772 4498992 R COG2235 Arginine deiminase; arginine deiminase complement(4497772..4498992) Escherichia coli UM146 12702814 YP_006113145.1 CDS UM146_21525 NC_017632.1 4499670 4500122 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 4499670..4500122 Escherichia coli UM146 12702815 YP_006113146.1 CDS UM146_21530 NC_017632.1 4500168 4501172 R COG0078 Ornithine carbamoyltransferase; ornithine carbamoyltransferase subunit F complement(4500168..4501172) Escherichia coli UM146 12702816 YP_006113147.1 CDS UM146_21535 NC_017632.1 4501334 4501750 D COG3076 Uncharacterized protein conserved in bacteria; hypothetical protein 4501334..4501750 Escherichia coli UM146 12702817 YP_006113148.1 CDS UM146_21540 NC_017632.1 4501927 4502430 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase complement(4501927..4502430) Escherichia coli UM146 12702818 YP_006113149.1 CDS UM146_21545 NC_017632.1 4502623 4503810 D COG4269 Predicted membrane protein; putative inner membrane protein 4502623..4503810 Escherichia coli UM146 12702819 YP_006113150.1 CDS valS NC_017632.1 4503857 4506712 R COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase complement(4503857..4506712) Escherichia coli UM146 12702820 YP_006113151.1 CDS UM146_21555 NC_017632.1 4506712 4507155 R COG2927 DNA polymerase III, chi subunit; DNA polymerase III subunit chi complement(4506712..4507155) Escherichia coli UM146 12702821 YP_006113152.1 CDS UM146_21560 NC_017632.1 4507413 4508924 R COG0260 Leucyl aminopeptidase; leucyl aminopeptidase complement(4507413..4508924) Escherichia coli UM146 12702822 YP_006113153.1 CDS UM146_21565 NC_017632.1 4509191 4510291 D COG0795 Predicted permeases; Inner membrane protein yjgP 4509191..4510291 Escherichia coli UM146 12702823 YP_006113154.1 CDS UM146_21570 NC_017632.1 4510291 4511373 D COG0795 Predicted permeases; hypothetical protein 4510291..4511373 Escherichia coli UM146 12702824 YP_006113155.1 CDS UM146_21575 NC_017632.1 4511534 4513036 R COG0433 Predicted ATPase; hypothetical protein complement(4511534..4513036) Escherichia coli UM146 12702825 YP_006113156.1 CDS UM146_21580 NC_017632.1 4513114 4514112 R COG1609 Transcriptional regulators; L-idonate regulatory protein complement(4513114..4514112) Escherichia coli UM146 12702826 YP_006113157.1 CDS UM146_21585 NC_017632.1 4514179 4515498 R COG2610 H+/gluconate symporter and related permeases; L-idonate and D-gluconate transporter complement(4514179..4515498) Escherichia coli UM146 12702827 YP_006113158.1 CDS UM146_21590 NC_017632.1 4515563 4516327 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); gluconate 5-dehydrogenase complement(4515563..4516327) Escherichia coli UM146 12702828 YP_006113159.1 CDS UM146_21595 NC_017632.1 4516351 4517382 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; L-idonate 5-dehydrogenase complement(4516351..4517382) Escherichia coli UM146 12702829 YP_006113160.1 CDS idnK NC_017632.1 4517599 4518162 D COG3265 Gluconate kinase; D-gluconate kinase 4517599..4518162 Escherichia coli UM146 12702830 YP_006113161.1 CDS UM146_21605 NC_017632.1 4518166 4519185 R COG1064 Zn-dependent alcohol dehydrogenases; putative oxidoreductase complement(4518166..4519185) Escherichia coli UM146 12702831 YP_006113162.1 CDS UM146_21610 NC_017632.1 4519651 4520913 D COG0582 Integrase; prophage P4 integrase 4519651..4520913 Escherichia coli UM146 12702833 YP_006113163.1 CDS UM146_21615 NC_017632.1 4521365 4524880 D COG1112 Superfamily I DNA and RNA helicases and helicase subunits; superfamily I DNA helicase 4521365..4524880 Escherichia coli UM146 12702834 YP_006113164.1 CDS UM146_21620 NC_017632.1 4524989 4526362 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein complement(4524989..4526362) Escherichia coli UM146 12702835 YP_006113165.1 CDS UM146_21625 NC_017632.1 4526669 4527424 R COG3637 Opacity protein and related surface antigens; OmpA family protein complement(4526669..4527424) Escherichia coli UM146 12702836 YP_006113166.1 CDS UM146_21630 NC_017632.1 4527627 4527995 R hypothetical protein complement(4527627..4527995) Escherichia coli UM146 12702837 YP_006113167.1 CDS UM146_21635 NC_017632.1 4528771 4529070 D putative cobalamin synthesis protein 4528771..4529070 Escherichia coli UM146 12702838 YP_006113168.1 CDS UM146_21640 NC_017632.1 4529555 4529971 R COG1846 Transcriptional regulators; Putative HTH-type transcriptional regulator complement(4529555..4529971) Escherichia coli UM146 12702839 YP_006113169.1 CDS UM146_21645 NC_017632.1 4530368 4531375 R protein PapG complement(4530368..4531375) Escherichia coli UM146 12702840 YP_006113170.1 CDS UM146_21650 NC_017632.1 4531419 4531922 R PapF protein complement(4531419..4531922) Escherichia coli UM146 12702842 YP_006113171.1 CDS UM146_21655 NC_017632.1 4531998 4532537 R Fimbrial tip protein PapE complement(4531998..4532537) Escherichia coli UM146 12702843 YP_006113172.1 CDS UM146_21660 NC_017632.1 4532546 4533082 R COG3539 P pilus assembly protein, pilin FimA; PapK fimbrial adapter complement(4532546..4533082) Escherichia coli UM146 12702844 YP_006113173.1 CDS UM146_21665 NC_017632.1 4533092 4533673 R Protein PapJ precursor, P pilus assembly complement(4533092..4533673) Escherichia coli UM146 12702845 YP_006113174.1 CDS UM146_21670 NC_017632.1 4533710 4534444 R COG3121 P pilus assembly protein, chaperone PapD; Chaperone protein PapD precursor complement(4533710..4534444) Escherichia coli UM146 12702846 YP_006113175.1 CDS UM146_21675 NC_017632.1 4534515 4537025 R COG3188 P pilus assembly protein, porin PapC; Outer membrane usher protein PapC precursor complement(4534515..4537025) Escherichia coli UM146 12702847 YP_006113176.1 CDS UM146_21680 NC_017632.1 4537084 4537671 R minor pilin protein PapH complement(4537084..4537671) Escherichia coli UM146 12702848 YP_006113177.1 CDS UM146_21685 NC_017632.1 4537734 4538297 R COG3539 P pilus assembly protein, pilin FimA; major pilin protein PapA complement(4537734..4538297) Escherichia coli UM146 12702849 YP_006113178.1 CDS UM146_21690 NC_017632.1 4538505 4538819 R pap operon regulatory protein PapB complement(4538505..4538819) Escherichia coli UM146 12702850 YP_006113179.1 CDS UM146_21695 NC_017632.1 4539224 4539457 D COG2345 Predicted transcriptional regulator; pap operon regulatory protein PapI 4539224..4539457 Escherichia coli UM146 12702851 YP_006113180.1 CDS UM146_21700 NC_017632.1 4539563 4539793 R hypothetical protein complement(4539563..4539793) Escherichia coli UM146 12702852 YP_006113181.1 CDS UM146_21705 NC_017632.1 4539960 4540328 D hypothetical protein 4539960..4540328 Escherichia coli UM146 12702853 YP_006113182.1 CDS UM146_21710 NC_017632.1 4541378 4541854 R hypothetical protein complement(4541378..4541854) Escherichia coli UM146 12702854 YP_006113183.1 CDS UM146_21715 NC_017632.1 4541917 4542123 R hypothetical protein complement(4541917..4542123) Escherichia coli UM146 12702855 YP_006113184.1 CDS UM146_21720 NC_017632.1 4542416 4542574 R hypothetical protein complement(4542416..4542574) Escherichia coli UM146 12702856 YP_006113185.1 CDS UM146_21725 NC_017632.1 4542575 4542943 R hypothetical protein complement(4542575..4542943) Escherichia coli UM146 12702857 YP_006113186.1 CDS UM146_21730 NC_017632.1 4543219 4544298 R COG3539 P pilus assembly protein, pilin FimA; putative F17-like fimbril adhesin subunit complement(4543219..4544298) Escherichia coli UM146 12702858 YP_006113187.1 CDS UM146_21735 NC_017632.1 4544295 4546829 R COG3188 P pilus assembly protein, porin PapC; putative F17-like fimbrial usher complement(4544295..4546829) Escherichia coli UM146 12702859 YP_006113188.1 CDS UM146_21740 NC_017632.1 4546837 4547241 R COG3121 P pilus assembly protein, chaperone PapD; putative F17-like fimbrial chaperone complement(4546837..4547241) Escherichia coli UM146 12702860 YP_006113189.1 CDS UM146_21745 NC_017632.1 4547627 4548175 R COG3539 P pilus assembly protein, pilin FimA; F17 fimbrial protein complement(4547627..4548175) Escherichia coli UM146 12702861 YP_006113190.1 CDS UM146_21750 NC_017632.1 4548172 4548291 R hypothetical protein complement(4548172..4548291) Escherichia coli UM146 12702862 YP_006113191.1 CDS UM146_21755 NC_017632.1 4548751 4549179 R COG2259 Predicted membrane protein; hypothetical protein complement(4548751..4549179) Escherichia coli UM146 12702863 YP_006113192.1 CDS UM146_21760 NC_017632.1 4549176 4550405 R COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; putative FMN-dependent dehydrogenase complement(4549176..4550405) Escherichia coli UM146 12702864 YP_006113193.1 CDS UM146_21765 NC_017632.1 4550444 4550992 R hypothetical protein complement(4550444..4550992) Escherichia coli UM146 12702865 YP_006113194.1 CDS UM146_21770 NC_017632.1 4551162 4551803 D COG1309 Transcriptional regulator; putative transcription regulator protein 4551162..4551803 Escherichia coli UM146 12702866 YP_006113195.1 CDS UM146_21775 NC_017632.1 4552156 4552305 D hypothetical protein 4552156..4552305 Escherichia coli UM146 12702867 YP_006113196.1 CDS UM146_21780 NC_017632.1 4552659 4552844 R COG3436 Transposase and inactivated derivatives; hypothetical protein complement(4552659..4552844) Escherichia coli UM146 12702868 YP_006113197.1 CDS UM146_21785 NC_017632.1 4552908 4554041 D COG3547 Transposase and inactivated derivatives; putative transposase, IS110 family protein 4552908..4554041 Escherichia coli UM146 12702869 YP_006113198.1 CDS UM146_21790 NC_017632.1 4554151 4555719 R COG3436 Transposase and inactivated derivatives; hypothetical protein complement(4554151..4555719) Escherichia coli UM146 12702870 YP_006113199.1 CDS UM146_21795 NC_017632.1 4555750 4556100 R COG3436 Transposase and inactivated derivatives; hypothetical protein complement(4555750..4556100) Escherichia coli UM146 12702871 YP_006113200.1 CDS UM146_21800 NC_017632.1 4556097 4556459 R COG2963 Transposase and inactivated derivatives; transposase OrfA, ISEc8 complement(4556097..4556459) Escherichia coli UM146 12702872 YP_006113201.1 CDS UM146_21805 NC_017632.1 4556867 4557241 R COG2801 Transposase and inactivated derivatives; transposase complement(4556867..4557241) Escherichia coli UM146 12702873 YP_006113202.1 CDS UM146_21810 NC_017632.1 4557198 4557434 R COG2801 Transposase and inactivated derivatives; IS3 ORF2 complement(4557198..4557434) Escherichia coli UM146 12702874 YP_006113203.1 CDS UM146_21815 NC_017632.1 4557431 4557730 R COG2963 Transposase and inactivated derivatives; IS3 ORF1 complement(4557431..4557730) Escherichia coli UM146 12702875 YP_006113204.1 CDS UM146_21820 NC_017632.1 4557824 4558276 D Integrase, catalytic region 4557824..4558276 Escherichia coli UM146 12702876 YP_006113205.1 CDS UM146_21825 NC_017632.1 4558650 4561694 R cytotoxic necrotizing factor 2 protein Cnf2 complement(4558650..4561694) Escherichia coli UM146 12702877 YP_006113206.1 CDS UM146_21830 NC_017632.1 4561972 4562250 R urea transporter complement(4561972..4562250) Escherichia coli UM146 12702878 YP_006113207.1 CDS UM146_21835 NC_017632.1 4562640 4564076 R COG0845 Membrane-fusion protein; hemolysin D complement(4562640..4564076) Escherichia coli UM146 12702879 YP_006113208.1 CDS UM146_21840 NC_017632.1 4564095 4566218 R COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; alpha-hemolysin translocation ATP-binding protein HlyB complement(4564095..4566218) Escherichia coli UM146 12702880 YP_006113209.1 CDS UM146_21845 NC_017632.1 4566289 4569363 R COG2931 RTX toxins and related Ca2+-binding proteins; hemolysin A complement(4566289..4569363) Escherichia coli UM146 12702881 YP_006113210.1 CDS UM146_21850 NC_017632.1 4569375 4570004 R COG2994 ACP:hemolysin acyltransferase (hemolysin-activating protein); hemolysin-activating lysine-acyltransferase HlyC complement(4569375..4570004) Escherichia coli UM146 12702882 YP_006113211.1 CDS UM146_21855 NC_017632.1 4571071 4571313 R hypothetical protein complement(4571071..4571313) Escherichia coli UM146 12702883 YP_006113212.1 CDS UM146_21860 NC_017632.1 4571341 4572111 R COG2041 Sulfite oxidase and related enzymes; oxidoreductase, molybdopterin binding protein complement(4571341..4572111) Escherichia coli UM146 12702884 YP_006113213.1 CDS UM146_21865 NC_017632.1 4572111 4572710 R COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); hypothetical protein complement(4572111..4572710) Escherichia coli UM146 12702885 YP_006113214.1 CDS UM146_21870 NC_017632.1 4572850 4573569 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding response regulator 4572850..4573569 Escherichia coli UM146 12702886 YP_006113215.1 CDS UM146_21875 NC_017632.1 4573570 4575042 D COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4573570..4575042 Escherichia coli UM146 12702887 YP_006113216.1 CDS UM146_21880 NC_017632.1 4575122 4575475 R COG2801 Transposase and inactivated derivatives; hypothetical protein complement(4575122..4575475) Escherichia coli UM146 12702888 YP_006113217.1 CDS UM146_21885 NC_017632.1 4575804 4575944 R COG2801 Transposase and inactivated derivatives; hypothetical protein complement(4575804..4575944) Escherichia coli UM146 12702889 YP_006113218.1 CDS UM146_21890 NC_017632.1 4575971 4576291 R COG2963 Transposase and inactivated derivatives; putative transposase complement(4575971..4576291) Escherichia coli UM146 12702890 YP_006113219.1 CDS UM146_21895 NC_017632.1 4576320 4576586 R COG4584 Transposase and inactivated derivatives; hypothetical protein complement(4576320..4576586) Escherichia coli UM146 12702891 YP_006113220.1 CDS UM146_21900 NC_017632.1 4577267 4577791 R hypothetical protein complement(4577267..4577791) Escherichia coli UM146 12702892 YP_006113221.1 CDS UM146_21905 NC_017632.1 4577911 4578933 R hypothetical protein complement(4577911..4578933) Escherichia coli UM146 12702893 YP_006113222.1 CDS UM146_21920 NC_017632.1 4581911 4582957 R COG0270 Site-specific DNA methylase; DNA-cytosine methyltransferase complement(4581911..4582957) Escherichia coli UM146 12702894 YP_006113223.1 CDS UM146_21935 NC_017632.1 4584215 4584496 R hypothetical protein complement(4584215..4584496) Escherichia coli UM146 12702895 YP_006113224.1 CDS UM146_21940 NC_017632.1 4584540 4584803 R hypothetical protein complement(4584540..4584803) Escherichia coli UM146 12702896 YP_006113225.1 CDS UM146_21945 NC_017632.1 4584852 4585175 R COG3436 Transposase and inactivated derivatives; hypothetical protein complement(4584852..4585175) Escherichia coli UM146 12702897 YP_006113226.1 CDS UM146_21950 NC_017632.1 4585260 4585646 R hypothetical protein complement(4585260..4585646) Escherichia coli UM146 12702898 YP_006113227.1 CDS UM146_21955 NC_017632.1 4585643 4595431 R COG3210 Large exoproteins involved in heme utilization or adhesion; hemagglutinin-related protein complement(4585643..4595431) Escherichia coli UM146 12702899 YP_006113228.1 CDS UM146_21960 NC_017632.1 4595444 4597210 R COG2831 Hemolysin activation/secretion protein; putative hemolysin activator HlyB complement(4595444..4597210) Escherichia coli UM146 12702900 YP_006113229.1 CDS UM146_21965 NC_017632.1 4597574 4597807 R hypothetical protein complement(4597574..4597807) Escherichia coli UM146 12702901 YP_006113230.1 CDS UM146_21970 NC_017632.1 4597905 4598528 R hypothetical protein complement(4597905..4598528) Escherichia coli UM146 12702902 YP_006113231.1 CDS UM146_21975 NC_017632.1 4598796 4599344 R hypothetical protein complement(4598796..4599344) Escherichia coli UM146 12702903 YP_006113232.1 CDS UM146_21980 NC_017632.1 4599611 4599844 R COG3311 Predicted transcriptional regulator; hypothetical protein complement(4599611..4599844) Escherichia coli UM146 12702904 YP_006113233.1 CDS UM146_21985 NC_017632.1 4599913 4600473 R hypothetical protein complement(4599913..4600473) Escherichia coli UM146 12702905 YP_006113234.1 CDS UM146_21990 NC_017632.1 4600720 4601286 R hypothetical protein complement(4600720..4601286) Escherichia coli UM146 12702906 YP_006113235.1 CDS UM146_21995 NC_017632.1 4602397 4603725 R COG3048 D-serine dehydratase; D-serine dehydratase complement(4602397..4603725) Escherichia coli UM146 12702907 YP_006113236.1 CDS UM146_22000 NC_017632.1 4603743 4605080 R COG2610 H+/gluconate symporter and related permeases; permease DsdX complement(4603743..4605080) Escherichia coli UM146 12702908 YP_006113237.1 CDS UM146_22005 NC_017632.1 4605297 4606532 D COG0583 Transcriptional regulator; DNA-binding transcriptional regulator DsdC 4605297..4606532 Escherichia coli UM146 12702909 YP_006113238.1 CDS UM146_22010 NC_017632.1 4606328 4606774 D COG2801 Transposase and inactivated derivatives; putative IS orf 4606328..4606774 Escherichia coli UM146 12702910 YP_006113239.1 CDS UM146_22015 NC_017632.1 4606913 4607242 R COG2076 Membrane transporters of cations and cationic drugs; Putative multidrug resistance protein complement(4606913..4607242) Escherichia coli UM146 12702911 YP_006113240.1 CDS UM146_22020 NC_017632.1 4607258 4607659 R COG2076 Membrane transporters of cations and cationic drugs; Putative membrane transport protein precursor complement(4607258..4607659) Escherichia coli UM146 12702912 YP_006113241.1 CDS UM146_22025 NC_017632.1 4607692 4608357 R hypothetical protein complement(4607692..4608357) Escherichia coli UM146 12702913 YP_006113242.1 CDS UM146_22030 NC_017632.1 4608369 4608989 R COG4869 Propanediol utilization protein; hypothetical protein complement(4608369..4608989) Escherichia coli UM146 12702914 YP_006113243.1 CDS UM146_22035 NC_017632.1 4608986 4609450 R COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; Putative microcompartments protein complement(4608986..4609450) Escherichia coli UM146 12702915 YP_006113244.1 CDS UM146_22040 NC_017632.1 4609462 4610409 R COG1180 Pyruvate-formate lyase-activating enzyme; Putative pyruvate formate-lyase activating enzyme complement(4609462..4610409) Escherichia coli UM146 12702916 YP_006113245.1 CDS UM146_22045 NC_017632.1 4610461 4613847 R COG1882 Pyruvate-formate lyase; formate C-acetyltransferase complement(4610461..4613847) Escherichia coli UM146 12702917 YP_006113246.1 CDS UM146_22050 NC_017632.1 4613874 4615028 R COG1454 Alcohol dehydrogenase, class IV; alcohol dehydrogenase, iron-containing protein complement(4613874..4615028) Escherichia coli UM146 12702918 YP_006113247.1 CDS UM146_22055 NC_017632.1 4615044 4615301 R COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; Putative ethanolamine utilization protein EutN/carboxysome structural protein Ccml complement(4615044..4615301) Escherichia coli UM146 12702919 YP_006113248.1 CDS UM146_22060 NC_017632.1 4615328 4616914 R COG1012 NAD-dependent aldehyde dehydrogenases; hypothetical protein complement(4615328..4616914) Escherichia coli UM146 12702920 YP_006113249.1 CDS UM146_22065 NC_017632.1 4616968 4617246 R COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; putative propanediol utilization protein: polyhedral bodies pduJ or pduA complement(4616968..4617246) Escherichia coli UM146 12702921 YP_006113250.1 CDS UM146_22070 NC_017632.1 4617261 4617545 R COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; putative Propanediol utilization protein pduA/pduJ complement(4617261..4617545) Escherichia coli UM146 12702922 YP_006113251.1 CDS UM146_22075 NC_017632.1 4617563 4617841 R COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; Putative propanediol utilization protein PduJ/pduA complement(4617563..4617841) Escherichia coli UM146 12702923 YP_006113252.1 CDS UM146_22080 NC_017632.1 4618361 4618879 R hypothetical protein complement(4618361..4618879) Escherichia coli UM146 12702924 YP_006113253.1 CDS UM146_22085 NC_017632.1 4618879 4619697 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; hypothetical protein complement(4618879..4619697) Escherichia coli UM146 12702925 YP_006113254.1 CDS UM146_22090 NC_017632.1 4619720 4620298 R COG1309 Transcriptional regulator; hypothetical protein complement(4619720..4620298) Escherichia coli UM146 12702926 YP_006113255.1 CDS UM146_22095 NC_017632.1 4620589 4621476 R COG2801 Transposase and inactivated derivatives; putative transposase OrfB protein of insertion sequence IS629 complement(4620589..4621476) Escherichia coli UM146 12702927 YP_006113256.1 CDS UM146_22100 NC_017632.1 4621476 4621802 R COG2963 Transposase and inactivated derivatives; transposase ORF A, IS629 complement(4621476..4621802) Escherichia coli UM146 12702928 YP_006113257.1 CDS UM146_22105 NC_017632.1 4622276 4623454 D COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; putative aminotransferase 4622276..4623454 Escherichia coli UM146 12702929 YP_006113258.1 CDS UM146_22110 NC_017632.1 4623447 4624898 D COG1757 Na+/H+ antiporter; putative Na+/H+ antiporter 4623447..4624898 Escherichia coli UM146 12702930 YP_006113259.1 CDS UM146_22115 NC_017632.1 4625522 4625701 D COG2963 Transposase and inactivated derivatives; putative transposase 4625522..4625701 Escherichia coli UM146 12702931 YP_006113260.1 CDS UM146_22120 NC_017632.1 4625698 4626177 D COG2963 Transposase and inactivated derivatives; hypothetical protein 4625698..4626177 Escherichia coli UM146 12702932 YP_006113261.1 CDS UM146_22125 NC_017632.1 4626212 4627090 R COG1715 Restriction endonuclease; hypothetical protein complement(4626212..4627090) Escherichia coli UM146 12702933 YP_006113262.1 CDS UM146_22130 NC_017632.1 4627418 4628149 R hypothetical protein complement(4627418..4628149) Escherichia coli UM146 12702934 YP_006113263.1 CDS UM146_22135 NC_017632.1 4628571 4628840 R hypothetical protein complement(4628571..4628840) Escherichia coli UM146 12702935 YP_006113264.1 CDS UM146_22140 NC_017632.1 4629632 4630855 R hypothetical protein complement(4629632..4630855) Escherichia coli UM146 12702936 YP_006113265.1 CDS UM146_22145 NC_017632.1 4630956 4631840 D COG3596 Predicted GTPase; hypothetical protein 4630956..4631840 Escherichia coli UM146 12702937 YP_006113266.1 CDS UM146_22150 NC_017632.1 4631859 4632014 D hypothetical protein 4631859..4632014 Escherichia coli UM146 12702938 YP_006113267.1 CDS UM146_22155 NC_017632.1 4632043 4632723 D COG2378 Predicted transcriptional regulator; putative HTH-type transcriptional regulator 4632043..4632723 Escherichia coli UM146 12702939 YP_006113268.1 CDS UM146_22160 NC_017632.1 4632766 4633548 D hypothetical protein 4632766..4633548 Escherichia coli UM146 12702940 YP_006113269.1 CDS UM146_22165 NC_017632.1 4633554 4633787 D hypothetical protein 4633554..4633787 Escherichia coli UM146 12702941 YP_006113270.1 CDS UM146_22170 NC_017632.1 4633877 4634695 D hypothetical protein 4633877..4634695 Escherichia coli UM146 12702942 YP_006113271.1 CDS UM146_22175 NC_017632.1 4634786 4635271 D putative antirestriction protein 4634786..4635271 Escherichia coli UM146 12702943 YP_006113272.1 CDS UM146_22180 NC_017632.1 4635286 4635762 D COG2003 DNA repair proteins; putative DNA repair protein 4635286..4635762 Escherichia coli UM146 12702944 YP_006113273.1 CDS UM146_22185 NC_017632.1 4635849 4636070 D hypothetical protein 4635849..4636070 Escherichia coli UM146 12702945 YP_006113274.1 CDS UM146_22190 NC_017632.1 4636150 4636518 D hypothetical protein 4636150..4636518 Escherichia coli UM146 12702946 YP_006113275.1 CDS UM146_22195 NC_017632.1 4636608 4636985 D hypothetical protein 4636608..4636985 Escherichia coli UM146 12702947 YP_006113276.1 CDS UM146_22200 NC_017632.1 4636982 4637470 D hypothetical protein 4636982..4637470 Escherichia coli UM146 12702948 YP_006113277.1 CDS UM146_22205 NC_017632.1 4637482 4637679 D hypothetical protein 4637482..4637679 Escherichia coli UM146 12702949 YP_006113278.1 CDS UM146_22210 NC_017632.1 4638155 4638373 D hypothetical protein 4638155..4638373 Escherichia coli UM146 12702950 YP_006113279.1 CDS UM146_22215 NC_017632.1 4638928 4640811 D hypothetical protein 4638928..4640811 Escherichia coli UM146 12702951 YP_006113280.1 CDS UM146_22220 NC_017632.1 4641302 4641403 R hypothetical protein complement(4641302..4641403) Escherichia coli UM146 12702952 YP_006113281.1 CDS UM146_22225 NC_017632.1 4641526 4642431 R COG3440 Predicted restriction endonuclease; putative restriction endonuclease complement(4641526..4642431) Escherichia coli UM146 12702953 YP_006113282.1 CDS UM146_22230 NC_017632.1 4642609 4643589 R hypothetical protein complement(4642609..4643589) Escherichia coli UM146 12702954 YP_006113283.1 CDS UM146_22235 NC_017632.1 4643654 4644760 R COG3055 Uncharacterized protein conserved in bacteria; N-acetylneuraminic acid mutarotase complement(4643654..4644760) Escherichia coli UM146 12702955 YP_006113284.1 CDS UM146_22240 NC_017632.1 4644780 4645328 R hypothetical protein complement(4644780..4645328) Escherichia coli UM146 12702956 YP_006113285.1 CDS UM146_22245 NC_017632.1 4646295 4646702 R hypothetical protein complement(4646295..4646702) Escherichia coli UM146 12702957 YP_006113286.1 CDS UM146_22250 NC_017632.1 4646962 4647564 D COG0582 Integrase; tyrosine recombinase 4646962..4647564 Escherichia coli UM146 12702958 YP_006113287.1 CDS UM146_22255 NC_017632.1 4648042 4648638 D COG0582 Integrase; tyrosine recombinase 4648042..4648638 Escherichia coli UM146 12702959 YP_006113288.1 CDS UM146_22260 NC_017632.1 4649118 4649672 D COG3539 P pilus assembly protein, pilin FimA; type 1 fimbriae major subunit FimA 4649118..4649672 Escherichia coli UM146 12702960 YP_006113289.1 CDS UM146_22265 NC_017632.1 4649779 4650276 D COG3539 P pilus assembly protein, pilin FimA; FimI fimbrial protein 4649779..4650276 Escherichia coli UM146 12702961 YP_006113290.1 CDS UM146_22270 NC_017632.1 4650313 4651038 D COG3121 P pilus assembly protein, chaperone PapD; type I fimbrial chaperone 4650313..4651038 Escherichia coli UM146 12702962 YP_006113291.1 CDS UM146_22275 NC_017632.1 4651104 4653740 D COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein, type 1 fimbrial synthesis 4651104..4653740 Escherichia coli UM146 12702963 YP_006113292.1 CDS UM146_22280 NC_017632.1 4653750 4654280 D COG3539 P pilus assembly protein, pilin FimA; FimF protein 4653750..4654280 Escherichia coli UM146 12702964 YP_006113293.1 CDS UM146_22285 NC_017632.1 4654293 4654796 D COG3539 P pilus assembly protein, pilin FimA; P pilus assembly protein, pilin FimA 4654293..4654796 Escherichia coli UM146 12702965 YP_006113294.1 CDS UM146_22290 NC_017632.1 4654816 4655718 D type 1 fimbiral adhesin FimH 4654816..4655718 Escherichia coli UM146 12702966 YP_006113295.1 CDS UM146_22295 NC_017632.1 4656447 4657631 D COG1312 D-mannonate dehydratase; mannonate dehydratase 4656447..4657631 Escherichia coli UM146 12702967 YP_006113296.1 CDS UM146_22300 NC_017632.1 4657712 4659172 D COG0246 Mannitol-1-phosphate/altronate dehydrogenases; D-mannonate oxidoreductase 4657712..4659172 Escherichia coli UM146 12702968 YP_006113297.1 CDS UM146_22305 NC_017632.1 4659387 4660160 D COG2186 Transcriptional regulators; DNA-binding transcriptional repressor UxuR 4659387..4660160 Escherichia coli UM146 12702969 YP_006113298.1 CDS iraD NC_017632.1 4660574 4660957 D DNA replication/recombination/repair protein 4660574..4660957 Escherichia coli UM146 12702970 YP_006113299.1 CDS UM146_22315 NC_017632.1 4661005 4663317 R COG3412 Uncharacterized protein conserved in bacteria; putative phosphoenolpyruvate-protein phosphoryltransferase PptE complement(4661005..4663317) Escherichia coli UM146 12702971 YP_006113300.1 CDS UM146_22320 NC_017632.1 4663390 4664022 R COG2376 Dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaL complement(4663390..4664022) Escherichia coli UM146 12702972 YP_006113301.1 CDS UM146_22325 NC_017632.1 4664035 4665099 R COG2376 Dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK complement(4664035..4665099) Escherichia coli UM146 12702973 YP_006113302.1 CDS gldA NC_017632.1 4665424 4666506 D COG0371 Glycerol dehydrogenase and related enzymes; glycerol dehydrogenase 4665424..4666506 Escherichia coli UM146 12702974 YP_006113303.1 CDS UM146_22335 NC_017632.1 4666573 4667841 D COG0477 Permeases of the major facilitator superfamily; putative transporter 4666573..4667841 Escherichia coli UM146 12702975 YP_006113304.1 CDS UM146_22340 NC_017632.1 4667859 4669223 D COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; putative dihydrolipoamide dehydrogenase 4667859..4669223 Escherichia coli UM146 12702976 YP_006113305.1 CDS UM146_22345 NC_017632.1 4669276 4669500 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 4669276..4669500 Escherichia coli UM146 12702977 YP_006113306.1 CDS UM146_22350 NC_017632.1 4669524 4671065 D COG1292 Choline-glycine betaine transporter; putative carnitine transporter CniT 4669524..4671065 Escherichia coli UM146 12702978 YP_006113307.1 CDS UM146_22355 NC_017632.1 4671121 4672263 R COG1929 Glycerate kinase; putative glycerate kinase GclK complement(4671121..4672263) Escherichia coli UM146 12702979 YP_006113308.1 CDS UM146_22360 NC_017632.1 4672338 4673225 R COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; putative 3-hydroxyisobutyrate dehydrogenase GhbD complement(4672338..4673225) Escherichia coli UM146 12702980 YP_006113309.1 CDS UM146_22365 NC_017632.1 4673243 4674025 R COG3622 Hydroxypyruvate isomerase; putative regulatory protein GclR complement(4673243..4674025) Escherichia coli UM146 12702981 YP_006113310.1 CDS UM146_22370 NC_017632.1 4674038 4675777 R COG3960 Glyoxylate carboligase; glyoxylate carboligase complement(4674038..4675777) Escherichia coli UM146 12702982 YP_006113311.1 CDS UM146_22375 NC_017632.1 4676171 4678105 D COG3284 Transcriptional activator of acetoin/glycerol metabolism; DNA-binding transcriptional regulator DhaR 4676171..4678105 Escherichia coli UM146 12702983 YP_006113312.1 CDS UM146_22380 NC_017632.1 4678392 4679762 D invasion protein IbeA 4678392..4679762 Escherichia coli UM146 12702984 YP_006113313.1 CDS UM146_22385 NC_017632.1 4679777 4681180 D COG1757 Na+/H+ antiporter; putative transporter IbeT 4679777..4681180 Escherichia coli UM146 12702985 YP_006113314.1 CDS UM146_22390 NC_017632.1 4681267 4682010 R COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator complement(4681267..4682010) Escherichia coli UM146 12702986 YP_006113315.1 CDS UM146_22395 NC_017632.1 4682012 4682107 R hypothetical protein complement(4682012..4682107) Escherichia coli UM146 12702987 YP_006113316.1 CDS UM146_22400 NC_017632.1 4682243 4683415 R COG0044 Dihydroorotase and related cyclic amidohydrolases; isoaspartyl dipeptidase complement(4682243..4683415) Escherichia coli UM146 12702988 YP_006113317.1 CDS UM146_22405 NC_017632.1 4683428 4683889 R COG0700 Uncharacterized membrane protein; hypothetical protein complement(4683428..4683889) Escherichia coli UM146 12702989 YP_006113318.1 CDS UM146_22410 NC_017632.1 4683886 4684569 R COG3314 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4683886..4684569) Escherichia coli UM146 12702990 YP_006113319.1 CDS UM146_22415 NC_017632.1 4684819 4685178 D COG1859 RNA:NAD 2'-phosphotransferase; RNA 2'-phosphotransferase-like protein 4684819..4685178 Escherichia coli UM146 12702991 YP_006113320.1 CDS UM146_22420 NC_017632.1 4685199 4685372 D COG1859 RNA:NAD 2'-phosphotransferase; RNA 2'-phosphotransferase-like protein 4685199..4685372 Escherichia coli UM146 12702992 YP_006113321.1 CDS UM146_22425 NC_017632.1 4685385 4685744 R COG0477 Permeases of the major facilitator superfamily; putative permease complement(4685385..4685744) Escherichia coli UM146 12702993 YP_006113322.1 CDS UM146_22430 NC_017632.1 4685732 4686562 R COG0477 Permeases of the major facilitator superfamily; putative permease complement(4685732..4686562) Escherichia coli UM146 12702994 YP_006113323.1 CDS UM146_22435 NC_017632.1 4686630 4687490 R COG3204 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4686630..4687490) Escherichia coli UM146 12702995 YP_006113324.1 CDS UM146_22440 NC_017632.1 4687555 4687812 R hypothetical protein complement(4687555..4687812) Escherichia coli UM146 12702996 YP_006113325.1 CDS UM146_22445 NC_017632.1 4687809 4688576 R COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase complement(4687809..4688576) Escherichia coli UM146 12702997 YP_006113326.1 CDS UM146_22450 NC_017632.1 4688586 4689737 R COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; putative 2-hydroxyglutaryl-CoA dehydratase complement(4688586..4689737) Escherichia coli UM146 12702998 YP_006113327.1 CDS UM146_22455 NC_017632.1 4689853 4691133 R COG2733 Predicted membrane protein; hypothetical protein complement(4689853..4691133) Escherichia coli UM146 12702999 YP_006113328.1 CDS UM146_22460 NC_017632.1 4691318 4692238 D hypothetical protein 4691318..4692238 Escherichia coli UM146 12703000 YP_006113329.1 CDS UM146_22465 NC_017632.1 4692644 4694737 D COG1479 Uncharacterized conserved protein; hypothetical protein 4692644..4694737 Escherichia coli UM146 12703001 YP_006113330.1 CDS UM146_22470 NC_017632.1 4694784 4695125 R COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; endoribonuclease SymE complement(4694784..4695125) Escherichia coli UM146 12703002 YP_006113331.1 CDS UM146_22475 NC_017632.1 4695354 4696721 R COG0732 Restriction endonuclease S subunits; EcoKI restriction-modification system protein HsdS complement(4695354..4696721) Escherichia coli UM146 12703003 YP_006113332.1 CDS UM146_22480 NC_017632.1 4696718 4698307 R COG0286 Type I restriction-modification system methyltransferase subunit; DNA methylase M complement(4696718..4698307) Escherichia coli UM146 12703004 YP_006113333.1 CDS hsdR NC_017632.1 4698509 4702021 R COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme EcoKI subunit R complement(4698509..4702021) Escherichia coli UM146 12703005 YP_006113334.1 CDS UM146_22490 NC_017632.1 4702209 4703123 D COG1715 Restriction endonuclease; methylated adenine and cytosine restriction protein 4702209..4703123 Escherichia coli UM146 12703006 YP_006113335.1 CDS UM146_22495 NC_017632.1 4703169 4704125 R COG0523 Putative GTPases (G3E family); putative GTP-binding protein YjiA complement(4703169..4704125) Escherichia coli UM146 12703007 YP_006113336.1 CDS UM146_22500 NC_017632.1 4704136 4704339 R COG2879 Uncharacterized small protein; hypothetical protein complement(4704136..4704339) Escherichia coli UM146 12703008 YP_006113337.1 CDS UM146_22505 NC_017632.1 4704457 4706607 R COG1966 Carbon starvation protein, predicted membrane protein; putative carbon starvation protein complement(4704457..4706607) Escherichia coli UM146 12703009 YP_006113338.1 CDS UM146_22510 NC_017632.1 4706984 4708639 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein I, serine sensor receptor 4706984..4708639 Escherichia coli UM146 12703010 YP_006113339.1 CDS UM146_22515 NC_017632.1 4708682 4709953 R COG1593 TRAP-type C4-dicarboxylate transport system, large permease component; hypothetical protein complement(4708682..4709953) Escherichia coli UM146 12703011 YP_006113340.1 CDS UM146_22520 NC_017632.1 4709950 4710423 R COG3090 TRAP-type C4-dicarboxylate transport system, small permease component; putative tripartite ATP-independent periplasmic transporter (dctQ-like) protein complement(4709950..4710423) Escherichia coli UM146 12703012 YP_006113341.1 CDS UM146_22535 NC_017632.1 4712148 4713800 D COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; putative Na(+)/H(+) exchanger YjcE 4712148..4713800 Escherichia coli UM146 12703013 YP_006113342.1 CDS UM146_22540 NC_017632.1 4713971 4714876 R COG2188 Transcriptional regulators; putative DNA-binding transcriptional regulator complement(4713971..4714876) Escherichia coli UM146 12703014 YP_006113343.1 CDS UM146_22545 NC_017632.1 4715015 4716037 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative oxidoreductase, Zn-dependent and NAD(P)-binding protein 4715015..4716037 Escherichia coli UM146 12703015 YP_006113344.1 CDS UM146_22550 NC_017632.1 4716177 4718468 R COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; phosphoglycerol transferase I complement(4716177..4718468) Escherichia coli UM146 12703016 YP_006113345.1 CDS UM146_22555 NC_017632.1 4718722 4719213 R hypothetical protein complement(4718722..4719213) Escherichia coli UM146 12703017 YP_006113346.1 CDS UM146_22560 NC_017632.1 4719265 4720002 R COG1484 DNA replication protein; DNA replication protein DnaC complement(4719265..4720002) Escherichia coli UM146 12703018 YP_006113347.1 CDS UM146_22565 NC_017632.1 4720005 4720544 R primosomal protein DnaI complement(4720005..4720544) Escherichia coli UM146 12703019 YP_006113348.1 CDS UM146_22570 NC_017632.1 4720652 4721125 R COG3610 Uncharacterized conserved protein; hypothetical protein complement(4720652..4721125) Escherichia coli UM146 12703020 YP_006113349.1 CDS UM146_22575 NC_017632.1 4721116 4721940 R COG2966 Uncharacterized conserved protein; hypothetical protein complement(4721116..4721940) Escherichia coli UM146 12703021 YP_006113350.1 CDS UM146_22580 NC_017632.1 4722506 4723231 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; putative DNA-binding transcriptional regulator 4722506..4723231 Escherichia coli UM146 12703022 YP_006113351.1 CDS UM146_22585 NC_017632.1 4723243 4723866 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; DNA-binding transcriptional activator BglJ 4723243..4723866 Escherichia coli UM146 12703023 YP_006113352.1 CDS UM146_22590 NC_017632.1 4723904 4724692 R COG4114 Uncharacterized Fe-S protein; ferric hydroximate transport ferric iron reductase complement(4723904..4724692) Escherichia coli UM146 12703024 YP_006113353.1 CDS UM146_22595 NC_017632.1 4724794 4725069 D hypothetical protein 4724794..4725069 Escherichia coli UM146 12703025 YP_006113354.1 CDS UM146_22600 NC_017632.1 4725497 4725619 R hypothetical protein complement(4725497..4725619) Escherichia coli UM146 12703029 YP_006113355.1 CDS rsmC NC_017632.1 4725631 4726662 R COG2813 16S RNA G1207 methylase RsmC; 16S ribosomal RNA m2G1207 methyltransferase complement(4725631..4726662) Escherichia coli UM146 12703030 YP_006113356.1 CDS UM146_22610 NC_017632.1 4726765 4727178 D COG3050 DNA polymerase III, psi subunit; DNA polymerase III subunit psi 4726765..4727178 Escherichia coli UM146 12703031 YP_006113357.1 CDS rimI NC_017632.1 4727147 4727593 D COG0456 Acetyltransferases; ribosomal-protein-alanine N-acetyltransferase 4727147..4727593 Escherichia coli UM146 12703032 YP_006113358.1 CDS UM146_22620 NC_017632.1 4727608 4728285 D COG1011 Predicted hydrolase (HAD superfamily); nucleotidase 4727608..4728285 Escherichia coli UM146 12703033 YP_006113359.1 CDS prfC NC_017632.1 4728376 4729965 D COG4108 Peptide chain release factor RF-3; peptide chain release factor 3 4728376..4729965 Escherichia coli UM146 12703034 YP_006113360.1 CDS UM146_22630 NC_017632.1 4730358 4730963 D COG2823 Predicted periplasmic or secreted lipoprotein; hypothetical protein 4730358..4730963 Escherichia coli UM146 12703036 YP_006113361.1 CDS UM146_22635 NC_017632.1 4731090 4731251 D hypothetical protein 4731090..4731251 Escherichia coli UM146 12703038 YP_006113362.1 CDS UM146_22640 NC_017632.1 4731373 4732446 D COG4667 Predicted esterase of the alpha-beta hydrolase superfamily; hypothetical protein 4731373..4732446 Escherichia coli UM146 12703040 YP_006113363.1 CDS UM146_22645 NC_017632.1 4732443 4733222 D COG0084 Mg-dependent DNase; putative deoxyribonuclease YjjV 4732443..4733222 Escherichia coli UM146 12703041 YP_006113364.1 CDS UM146_22650 NC_017632.1 4733439 4734302 R COG1180 Pyruvate-formate lyase-activating enzyme; putative pyruvate formate lyase activating enzyme complement(4733439..4734302) Escherichia coli UM146 12703042 YP_006113365.1 CDS UM146_22655 NC_017632.1 4734274 4735824 R hypothetical protein complement(4734274..4735824) Escherichia coli UM146 12703043 YP_006113366.1 CDS UM146_22660 NC_017632.1 4735876 4735977 D hypothetical protein 4735876..4735977 Escherichia coli UM146 12703044 YP_006113367.1 CDS UM146_22665 NC_017632.1 4736082 4736861 D COG0274 Deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase 4736082..4736861 Escherichia coli UM146 12703045 YP_006113368.1 CDS deoA NC_017632.1 4736939 4738261 D COG0213 Thymidine phosphorylase; thymidine phosphorylase 4736939..4738261 Escherichia coli UM146 12703046 YP_006113369.1 CDS UM146_22675 NC_017632.1 4738313 4739536 D COG1015 Phosphopentomutase; phosphopentomutase 4738313..4739536 Escherichia coli UM146 12703047 YP_006113370.1 CDS deoD NC_017632.1 4739593 4740312 D COG0813 Purine-nucleoside phosphorylase; purine nucleoside phosphorylase 4739593..4740312 Escherichia coli UM146 12703048 YP_006113371.1 CDS UM146_22685 NC_017632.1 4740479 4741810 D COG3550 Uncharacterized protein related to capsule biosynthesis enzymes; hypothetical protein 4740479..4741810 Escherichia coli UM146 12703049 YP_006113372.1 CDS lplA NC_017632.1 4741811 4742827 R COG0095 Lipoate-protein ligase A; lipoate-protein ligase A complement(4741811..4742827) Escherichia coli UM146 12703050 YP_006113373.1 CDS UM146_22695 NC_017632.1 4742855 4743499 R COG3726 Uncharacterized membrane protein affecting hemolysin expression; hypothetical protein complement(4742855..4743499) Escherichia coli UM146 12703051 YP_006113374.1 CDS serB NC_017632.1 4743605 4744573 D COG0560 Phosphoserine phosphatase; phosphoserine phosphatase 4743605..4744573 Escherichia coli UM146 12703052 YP_006113375.1 CDS UM146_22705 NC_017632.1 4744622 4746004 D COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 4744622..4746004 Escherichia coli UM146 12703053 YP_006113376.1 CDS UM146_22710 NC_017632.1 4746025 4747257 D COG1396 Predicted transcriptional regulators; nicotinamide-nucleotide adenylyltransferase 4746025..4747257 Escherichia coli UM146 12703054 YP_006113377.1 CDS UM146_22715 NC_017632.1 4747349 4747681 D COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; hypothetical protein 4747349..4747681 Escherichia coli UM146 12703055 YP_006113378.1 CDS UM146_22720 NC_017632.1 4747683 4747967 D COG2944 Predicted transcriptional regulator; hypothetical protein 4747683..4747967 Escherichia coli UM146 12703056 YP_006113379.1 CDS UM146_22725 NC_017632.1 4748023 4749690 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; putative ABC transporter ATP-binding protein complement(4748023..4749690) Escherichia coli UM146 12703057 YP_006113380.1 CDS UM146_22730 NC_017632.1 4749897 4751834 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic murein transglycosylase 4749897..4751834 Escherichia coli UM146 12703058 YP_006113381.1 CDS UM146_22735 NC_017632.1 4751924 4752250 D COG2973 Trp operon repressor; Trp operon repressor 4751924..4752250 Escherichia coli UM146 12703059 YP_006113382.1 CDS UM146_22740 NC_017632.1 4752323 4752859 R COG1986 Uncharacterized conserved protein; NTPase complement(4752323..4752859) Escherichia coli UM146 12703060 YP_006113383.1 CDS UM146_22745 NC_017632.1 4752902 4753549 D COG0406 Fructose-2,6-bisphosphatase; phosphoglycerate mutase 4752902..4753549 Escherichia coli UM146 12703061 YP_006113384.1 CDS UM146_22750 NC_017632.1 4753546 4754415 R COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator complement(4753546..4754415) Escherichia coli UM146 12703062 YP_006113385.1 CDS UM146_22755 NC_017632.1 4754626 4755099 D COG3045 Uncharacterized protein conserved in bacteria; hypothetical protein 4754626..4755099 Escherichia coli UM146 12703063 YP_006113386.1 CDS UM146_22760 NC_017632.1 4755112 4755801 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding response regulator CreB 4755112..4755801 Escherichia coli UM146 12703064 YP_006113387.1 CDS UM146_22765 NC_017632.1 4755801 4757225 D COG0642 Signal transduction histidine kinase; sensory histidine kinase CreC 4755801..4757225 Escherichia coli UM146 12703065 YP_006113388.1 CDS UM146_22770 NC_017632.1 4757283 4758635 D COG4452 Inner membrane protein involved in colicin E2 resistance; hypothetical protein 4757283..4758635 Escherichia coli UM146 12703066 YP_006113389.1 CDS UM146_22775 NC_017632.1 4758695 4759411 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two-component response regulator complement(4758695..4759411) Escherichia coli UM146 12703067 YP_006113390.1 CDS UM146_22780 NC_017632.1 4760047 4760733 D COG0565 rRNA methylase; putative RNA methyltransferase 4760047..4760733 Escherichia coli UM146 12703068 YP_006113391.1 CDS thrA NC_017632.1 4761093 4763555 D COG0527 Aspartokinases; bifunctional aspartokinase I/homoserine dehydrogenase I 4761093..4763555 Escherichia coli UM146 12703069 YP_006113392.1 CDS UM146_22790 NC_017632.1 4763557 4764489 D COG0083 Homoserine kinase; homoserine kinase 4763557..4764489 Escherichia coli UM146 12703070 YP_006113393.1 CDS UM146_22795 NC_017632.1 4764490 4765776 D COG0498 Threonine synthase; threonine synthase 4764490..4765776 Escherichia coli UM146 12703071 YP_006113394.1 CDS UM146_22800 NC_017632.1 4765990 4766286 D hypothetical protein 4765990..4766286 Escherichia coli UM146 12703072 YP_006113395.1 CDS UM146_22805 NC_017632.1 4766326 4767102 R COG3022 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4766326..4767102) Escherichia coli UM146 12703073 YP_006113396.1 CDS UM146_22810 NC_017632.1 4767172 4768602 R COG1115 Na+/alanine symporter; putative amino acid sodium/proton transporter complement(4767172..4768602) Escherichia coli UM146 12703074 YP_006113397.1 CDS UM146_22815 NC_017632.1 4768881 4769834 D COG0176 Transaldolase; transaldolase B 4768881..4769834 Escherichia coli UM146 12703075 YP_006113398.1 CDS mogA NC_017632.1 4769949 4770536 D COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MogA 4769949..4770536 Escherichia coli UM146 12703076 YP_006113399.1 CDS UM146_22825 NC_017632.1 4770741 4771307 R COG1584 Predicted membrane protein; hypothetical protein complement(4770741..4771307) Escherichia coli UM146 12703077 YP_006113400.1 CDS UM146_22830 NC_017632.1 4771456 4772169 R COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4771456..4772169) Escherichia coli UM146 12703078 YP_006113401.1 CDS UM146_22835 NC_017632.1 4772195 4772599 R hypothetical protein complement(4772195..4772599) Escherichia coli UM146 12703079 YP_006113402.1 CDS dnaK NC_017632.1 4772971 4774887 D COG0443 Molecular chaperone; molecular chaperone DnaK 4772971..4774887 Escherichia coli UM146 12703080 YP_006113403.1 CDS UM146_22850 NC_017632.1 4774976 4776106 D COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ 4774976..4776106 Escherichia coli UM146 12703081 YP_006113404.1 CDS UM146_22855 NC_017632.1 4776211 4776363 R regulatory protein MokC for HokC complement(4776211..4776363) Escherichia coli UM146 12703082 YP_006113405.1 CDS UM146_22860 NC_017632.1 4776974 4777735 D hypothetical protein 4776974..4777735 Escherichia coli UM146 12703083 YP_006113406.1 CDS UM146_22865 NC_017632.1 4777755 4779248 D COG3119 Arylsulfatase A and related enzymes; putative Cerebroside-sulfatase 4777755..4779248 Escherichia coli UM146 12703084 YP_006113407.1 CDS UM146_22870 NC_017632.1 4779377 4780636 D hypothetical protein 4779377..4780636 Escherichia coli UM146 12703085 YP_006113408.1 CDS nhaA NC_017632.1 4780871 4782037 D COG3004 Na+/H+ antiporter; pH-dependent sodium/proton antiporter 4780871..4782037 Escherichia coli UM146 12703086 YP_006113409.1 CDS nhaR NC_017632.1 4782103 4783002 D COG0583 Transcriptional regulator; transcriptional activator NhaR 4782103..4783002 Escherichia coli UM146 12703087 YP_006113410.1 CDS rpsT NC_017632.1 4783097 4783282 R COG0268 Ribosomal protein S20; 30S ribosomal protein S20 complement(4783097..4783282) Escherichia coli UM146 12703088 YP_006113411.1 CDS UM146_22890 NC_017632.1 4783463 4783681 D hypothetical protein 4783463..4783681 Escherichia coli UM146 12703089 YP_006113412.1 CDS UM146_22895 NC_017632.1 4783689 4784630 D COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase 4783689..4784630 Escherichia coli UM146 12703090 YP_006113413.1 CDS ileS NC_017632.1 4784673 4787489 D COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 4784673..4787489 Escherichia coli UM146 12703091 YP_006113414.1 CDS lspA NC_017632.1 4787489 4787983 D COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase 4787489..4787983 Escherichia coli UM146 12703092 YP_006113415.1 CDS UM146_22910 NC_017632.1 4788091 4788540 D COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase 4788091..4788540 Escherichia coli UM146 12703093 YP_006113416.1 CDS ispH NC_017632.1 4788542 4789492 D COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4788542..4789492 Escherichia coli UM146 12703094 YP_006113417.1 CDS UM146_22920 NC_017632.1 4789558 4790472 D COG1957 Inosine-uridine nucleoside N-ribohydrolase; ribonucleoside hydrolase RihC 4789558..4790472 Escherichia coli UM146 12703095 YP_006113418.1 CDS UM146_22925 NC_017632.1 4790495 4790860 D COG3152 Predicted membrane protein; hypothetical protein 4790495..4790860 Escherichia coli UM146 12703096 YP_006113419.1 CDS UM146_22930 NC_017632.1 4791021 4791842 D COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase 4791021..4791842 Escherichia coli UM146 12703097 YP_006113420.1 CDS UM146_22935 NC_017632.1 4792298 4793446 D COG0505 Carbamoylphosphate synthase small subunit; carbamoyl phosphate synthase small subunit 4792298..4793446 Escherichia coli UM146 12703098 YP_006113421.1 CDS carB NC_017632.1 4793464 4796685 D COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit 4793464..4796685 Escherichia coli UM146 12703099 YP_006113422.1 CDS UM146_22945 NC_017632.1 4796909 4797367 D COG1943 Transposase and inactivated derivatives; transposase IS605 family, IS200 group 4796909..4797367 Escherichia coli UM146 12703100 YP_006113423.1 CDS UM146_22950 NC_017632.1 4797657 4798052 D DNA-binding transcriptional activator CaiF 4797657..4798052 Escherichia coli UM146 12703101 YP_006113424.1 CDS UM146_22955 NC_017632.1 4798171 4798761 R COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; carnitine operon protein CaiE complement(4798171..4798761) Escherichia coli UM146 12703102 YP_006113425.1 CDS UM146_22960 NC_017632.1 4798767 4799552 R COG1024 Enoyl-CoA hydratase/carnithine racemase; carnitinyl-CoA dehydratase complement(4798767..4799552) Escherichia coli UM146 12703103 YP_006113426.1 CDS caiC NC_017632.1 4799661 4801214 R COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; putative crotonobetaine/carnitine-CoA ligase complement(4799661..4801214) Escherichia coli UM146 12703104 YP_006113427.1 CDS UM146_22970 NC_017632.1 4801287 4802504 R COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; crotonobetainyl-CoA:carnitine CoA-transferase complement(4801287..4802504) Escherichia coli UM146 12703105 YP_006113428.1 CDS UM146_22975 NC_017632.1 4802632 4803774 R COG1960 Acyl-CoA dehydrogenases; crotonobetainyl-CoA dehydrogenase complement(4802632..4803774) Escherichia coli UM146 12703106 YP_006113429.1 CDS UM146_22980 NC_017632.1 4803805 4805319 R COG1292 Choline-glycine betaine transporter; L-carnitine/gamma-butyrobetaine antiporter complement(4803805..4805319) Escherichia coli UM146 12703107 YP_006113430.1 CDS UM146_22985 NC_017632.1 4805792 4806562 D COG2086 Electron transfer flavoprotein, beta subunit; putative electron transfer flavoprotein FixA 4805792..4806562 Escherichia coli UM146 12703108 YP_006113431.1 CDS fixB NC_017632.1 4806577 4807518 D COG2025 Electron transfer flavoprotein, alpha subunit; putative electron transfer flavoprotein FixB 4806577..4807518 Escherichia coli UM146 12703109 YP_006113432.1 CDS UM146_22995 NC_017632.1 4807569 4808855 D COG0644 Dehydrogenases (flavoproteins); putative oxidoreductase FixC 4807569..4808855 Escherichia coli UM146 12703110 YP_006113433.1 CDS UM146_23000 NC_017632.1 4808852 4809139 D COG2440 Ferredoxin-like protein; putative ferredoxin 4808852..4809139 Escherichia coli UM146 12703111 YP_006113434.1 CDS UM146_23005 NC_017632.1 4809198 4810529 D COG0477 Permeases of the major facilitator superfamily; putative transporter 4809198..4810529 Escherichia coli UM146 12703112 YP_006113435.1 CDS UM146_23010 NC_017632.1 4810637 4811167 D COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); glutathione-regulated potassium-efflux system ancillary protein KefF 4810637..4811167 Escherichia coli UM146 12703113 YP_006113436.1 CDS UM146_23015 NC_017632.1 4811160 4813022 D COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein KefC 4811160..4813022 Escherichia coli UM146 12703114 YP_006113437.1 CDS folA NC_017632.1 4813103 4813693 D COG0262 Dihydrofolate reductase; dihydrofolate reductase 4813103..4813693 Escherichia coli UM146 12703115 YP_006113438.1 CDS UM146_23025 NC_017632.1 4813779 4814012 D COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid; putative antitoxin of gyrase inhibiting toxin-antitoxin system 4813779..4814012 Escherichia coli UM146 12703116 YP_006113439.1 CDS UM146_23030 NC_017632.1 4814015 4814137 D CcdB-like protein 4814015..4814137 Escherichia coli UM146 12703117 YP_006113440.1 CDS UM146_23035 NC_017632.1 4814214 4814330 D putative toxin of gyrase inhibiting toxin-antitoxin system 4814214..4814330 Escherichia coli UM146 12703118 YP_006113441.1 CDS apaH NC_017632.1 4814327 4815175 R COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; diadenosine tetraphosphatase complement(4814327..4815175) Escherichia coli UM146 12703119 YP_006113442.1 CDS apaG NC_017632.1 4815182 4815559 R COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; ApaG protein complement(4815182..4815559) Escherichia coli UM146 12703120 YP_006113443.1 CDS ksgA NC_017632.1 4815562 4816383 R COG0030 Dimethyladenosine transferase (rRNA methylation); dimethyladenosine transferase complement(4815562..4816383) Escherichia coli UM146 12703121 YP_006113444.1 CDS pdxA NC_017632.1 4816380 4817369 R COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase complement(4816380..4817369) Escherichia coli UM146 12703122 YP_006113445.1 CDS UM146_23060 NC_017632.1 4817369 4818655 R COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase SurA complement(4817369..4818655) Escherichia coli UM146 12703123 YP_006113446.1 CDS UM146_23065 NC_017632.1 4818708 4821062 R COG1452 Organic solvent tolerance protein OstA; organic solvent tolerance protein complement(4818708..4821062) Escherichia coli UM146 12703124 YP_006113447.1 CDS djlA NC_017632.1 4821317 4822132 D COG1076 DnaJ-domain-containing proteins 1; Dna-J like membrane chaperone protein 4821317..4822132 Escherichia coli UM146 12703125 YP_006113448.1 CDS UM146_23075 NC_017632.1 4822282 4822941 R COG0564 Pseudouridylate synthases, 23S RNA-specific; 23S rRNA/tRNA pseudouridine synthase A complement(4822282..4822941) Escherichia coli UM146 12703126 YP_006113449.1 CDS UM146_23080 NC_017632.1 4822953 4825859 R COG0553 Superfamily II DNA/RNA helicases, SNF2 family; ATP-dependent helicase HepA complement(4822953..4825859) Escherichia coli UM146 12703127 YP_006113450.1 CDS UM146_23085 NC_017632.1 4826023 4828374 R COG0417 DNA polymerase elongation subunit (family B); DNA polymerase II complement(4826023..4828374) Escherichia coli UM146 12703128 YP_006113451.1 CDS araD NC_017632.1 4828449 4829144 R COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase complement(4828449..4829144) Escherichia coli UM146 12703129 YP_006113452.1 CDS UM146_23095 NC_017632.1 4829429 4830931 R COG2160 L-arabinose isomerase; L-arabinose isomerase complement(4829429..4830931) Escherichia coli UM146 12703130 YP_006113453.1 CDS UM146_23100 NC_017632.1 4830942 4832642 R COG1069 Ribulose kinase; ribulokinase complement(4830942..4832642) Escherichia coli UM146 12703131 YP_006113454.1 CDS UM146_23105 NC_017632.1 4832981 4833826 D COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator AraC 4832981..4833826 Escherichia coli UM146 12703132 YP_006113455.1 CDS UM146_23110 NC_017632.1 4834340 4835188 D hypothetical protein 4834340..4835188 Escherichia coli UM146 12703133 YP_006113456.1 CDS UM146_23115 NC_017632.1 4835195 4835617 D hypothetical protein 4835195..4835617 Escherichia coli UM146 12703134 YP_006113457.1 CDS UM146_23120 NC_017632.1 4835772 4836536 D COG0586 Uncharacterized membrane-associated protein; hypothetical protein 4835772..4836536 Escherichia coli UM146 12703135 YP_006113458.1 CDS thiQ NC_017632.1 4836650 4837348 R COG3840 ABC-type thiamine transport system, ATPase component; thiamine transporter ATP-binding subunit complement(4836650..4837348) Escherichia coli UM146 12703136 YP_006113459.1 CDS thiP NC_017632.1 4837332 4838942 R COG0555 ABC-type sulfate transport system, permease component; thiamine transporter membrane protein complement(4837332..4838942) Escherichia coli UM146 12703137 YP_006113460.1 CDS tbpA NC_017632.1 4838918 4839901 R COG4143 ABC-type thiamine transport system, periplasmic component; thiamine transporter substrate binding subunit complement(4838918..4839901) Escherichia coli UM146 12703138 YP_006113461.1 CDS UM146_23140 NC_017632.1 4840065 4841720 R COG4533 ABC-type uncharacterized transport system, periplasmic component; transcriptional regulator SgrR complement(4840065..4841720) Escherichia coli UM146 12703139 YP_006113462.1 CDS UM146_23145 NC_017632.1 4841809 4841940 D hypothetical protein 4841809..4841940 Escherichia coli UM146 12703140 YP_006113463.1 CDS leuD NC_017632.1 4842048 4842653 R COG0066 3-isopropylmalate dehydratase small subunit; isopropylmalate isomerase small subunit complement(4842048..4842653) Escherichia coli UM146 12703141 YP_006113464.1 CDS UM146_23155 NC_017632.1 4842664 4844064 R COG0065 3-isopropylmalate dehydratase large subunit; isopropylmalate isomerase large subunit complement(4842664..4844064) Escherichia coli UM146 12703142 YP_006113465.1 CDS UM146_23160 NC_017632.1 4844067 4845158 R COG0473 Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(4844067..4845158) Escherichia coli UM146 12703143 YP_006113466.1 CDS UM146_23165 NC_017632.1 4845158 4846729 R COG0119 Isopropylmalate/homocitrate/citramalate synthases; 2-isopropylmalate synthase complement(4845158..4846729) Escherichia coli UM146 12703144 YP_006113467.1 CDS leuO NC_017632.1 4847565 4848509 D COG0583 Transcriptional regulator; leucine transcriptional activator 4847565..4848509 Escherichia coli UM146 12703145 YP_006113468.1 CDS UM146_23175 NC_017632.1 4848850 4850550 D COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase 3 catalytic subunit 4848850..4850550 Escherichia coli UM146 12703146 YP_006113469.1 CDS ilvH NC_017632.1 4850553 4851044 D COG0440 Acetolactate synthase, small (regulatory) subunit; acetolactate synthase 3 regulatory subunit 4850553..4851044 Escherichia coli UM146 12703147 YP_006113470.1 CDS UM146_23185 NC_017632.1 4851224 4852228 D COG1609 Transcriptional regulators; DNA-binding transcriptional regulator FruR 4851224..4852228 Escherichia coli UM146 12703148 YP_006113471.1 CDS UM146_23190 NC_017632.1 4852830 4853288 D COG2001 Uncharacterized protein conserved in bacteria; cell division protein MraZ 4852830..4853288 Escherichia coli UM146 12703149 YP_006113472.1 CDS mraW NC_017632.1 4853290 4854231 D COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; S-adenosyl-methyltransferase MraW 4853290..4854231 Escherichia coli UM146 12703150 YP_006113473.1 CDS UM146_23200 NC_017632.1 4854228 4854593 D COG3116 Cell division protein; cell division protein FtsL 4854228..4854593 Escherichia coli UM146 12703151 YP_006113474.1 CDS UM146_23205 NC_017632.1 4854609 4856375 D COG0768 Cell division protein FtsI/penicillin-binding protein 2; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) 4854609..4856375 Escherichia coli UM146 12703152 YP_006113475.1 CDS murE NC_017632.1 4856434 4857849 D COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 4856434..4857849 Escherichia coli UM146 12703153 YP_006113476.1 CDS murF NC_017632.1 4857846 4859204 D COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 4857846..4859204 Escherichia coli UM146 12703154 YP_006113477.1 CDS mraY NC_017632.1 4859198 4860280 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 4859198..4860280 Escherichia coli UM146 12703155 YP_006113478.1 CDS murD NC_017632.1 4860283 4861599 D COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 4860283..4861599 Escherichia coli UM146 12703156 YP_006113479.1 CDS UM146_23230 NC_017632.1 4861599 4862843 D COG0772 Bacterial cell division membrane protein; cell division protein FtsW 4861599..4862843 Escherichia coli UM146 12703157 YP_006113480.1 CDS murG NC_017632.1 4862840 4863907 D COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 4862840..4863907 Escherichia coli UM146 12703158 YP_006113481.1 CDS murC NC_017632.1 4863961 4865436 D COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 4863961..4865436 Escherichia coli UM146 12703159 YP_006113482.1 CDS ddl NC_017632.1 4865429 4866349 D COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanine--D-alanine ligase 4865429..4866349 Escherichia coli UM146 12703160 YP_006113483.1 CDS UM146_23250 NC_017632.1 4866351 4867181 D COG1589 Cell division septal protein; cell division protein FtsQ 4866351..4867181 Escherichia coli UM146 12703161 YP_006113484.1 CDS ftsA NC_017632.1 4867178 4868440 D COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA 4867178..4868440 Escherichia coli UM146 12703162 YP_006113485.1 CDS UM146_23260 NC_017632.1 4868501 4869652 D COG0206 Cell division GTPase; cell division protein FtsZ 4868501..4869652 Escherichia coli UM146 12703163 YP_006113486.1 CDS lpxC NC_017632.1 4869753 4870670 D COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 4869753..4870670 Escherichia coli UM146 12703164 YP_006113487.1 CDS UM146_23270 NC_017632.1 4870900 4871412 D SecA regulator SecM 4870900..4871412 Escherichia coli UM146 12703165 YP_006113488.1 CDS UM146_23285 NC_017632.1 4874238 4874636 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; nucleoside triphosphate pyrophosphohydrolase 4874238..4874636 Escherichia coli UM146 12703166 YP_006113489.1 CDS UM146_23290 NC_017632.1 4874724 4874921 R COG3024 Uncharacterized protein conserved in bacteria; zinc-binding protein complement(4874724..4874921) Escherichia coli UM146 12703167 YP_006113490.1 CDS UM146_23295 NC_017632.1 4874931 4875674 R COG4582 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4874931..4875674) Escherichia coli UM146 12703168 YP_006113491.1 CDS coaE NC_017632.1 4875674 4876294 R COG0237 Dephospho-CoA kinase; dephospho-CoA kinase complement(4875674..4876294) Escherichia coli UM146 12703169 YP_006113492.1 CDS UM146_23305 NC_017632.1 4876519 4877562 D COG0516 IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase 4876519..4877562 Escherichia coli UM146 12703170 YP_006113493.1 CDS UM146_23310 NC_017632.1 4877597 4878799 R COG1459 Type II secretory pathway, component PulF; type IV pilin biogenesis protein complement(4877597..4878799) Escherichia coli UM146 12703171 YP_006113494.1 CDS UM146_23315 NC_017632.1 4878789 4880174 R COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; hypothetical protein complement(4878789..4880174) Escherichia coli UM146 12703172 YP_006113495.1 CDS UM146_23320 NC_017632.1 4880184 4880624 R COG4969 Tfp pilus assembly protein, major pilin PilA; putative major pilin subunit complement(4880184..4880624) Escherichia coli UM146 12703173 YP_006113496.1 CDS UM146_23325 NC_017632.1 4880828 4881721 R COG0157 Nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase complement(4880828..4881721) Escherichia coli UM146 12703174 YP_006113497.1 CDS UM146_23330 NC_017632.1 4881809 4882360 D COG3023 Negative regulator of beta-lactamase expression; N-acetyl-anhydromuranmyl-L-alanine amidase 4881809..4882360 Escherichia coli UM146 12703175 YP_006113498.1 CDS UM146_23335 NC_017632.1 4882357 4883211 D COG1270 Cobalamin biosynthesis protein CobD/CbiB; regulatory protein AmpE 4882357..4883211 Escherichia coli UM146 12703176 YP_006113499.1 CDS UM146_23340 NC_017632.1 4883254 4884624 R COG1113 Gamma-aminobutyrate permease and related permeases; aromatic amino acid transporter complement(4883254..4884624) Escherichia coli UM146 12703177 YP_006113500.1 CDS UM146_23345 NC_017632.1 4885151 4886932 D COG3157 Hemolysin-coregulated protein (uncharacterized); uropathogenic specific protein 4885151..4886932 Escherichia coli UM146 12703178 YP_006113501.1 CDS UM146_23350 NC_017632.1 4886935 4887219 D Putative Colicin E7 immunity protein (ImmE7) (Microcin E7 immunity protein) 4886935..4887219 Escherichia coli UM146 12703179 YP_006113502.1 CDS UM146_23355 NC_017632.1 4887627 4887917 D Putative Colicin E7 immunity protein (ImmE7) (Microcin E7 immunity protein) 4887627..4887917 Escherichia coli UM146 12703180 YP_006113503.1 CDS UM146_23360 NC_017632.1 4888184 4888333 D hypothetical protein 4888184..4888333 Escherichia coli UM146 12703181 YP_006113504.1 CDS UM146_23365 NC_017632.1 4888320 4888616 D Putative Colicin E7 immunity protein (ImmE7) (Microcin E7 immunity protein) 4888320..4888616 Escherichia coli UM146 12703182 YP_006113505.1 CDS pdhR NC_017632.1 4889072 4889836 D COG2186 Transcriptional regulators; transcriptional regulator PdhR 4889072..4889836 Escherichia coli UM146 12703183 YP_006113506.1 CDS aceE NC_017632.1 4889997 4892660 D COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component; pyruvate dehydrogenase subunit E1 4889997..4892660 Escherichia coli UM146 12703184 YP_006113507.1 CDS aceF NC_017632.1 4892675 4894567 D COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide acetyltransferase 4892675..4894567 Escherichia coli UM146 12703185 YP_006113508.1 CDS UM146_23385 NC_017632.1 4894772 4896199 D COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase 4894772..4896199 Escherichia coli UM146 12703186 YP_006113509.1 CDS UM146_23390 NC_017632.1 4896441 4898198 R hypothetical protein complement(4896441..4898198) Escherichia coli UM146 12703187 YP_006113510.1 CDS UM146_23395 NC_017632.1 4898553 4901150 D COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 4898553..4901150 Escherichia coli UM146 12703188 YP_006113511.1 CDS UM146_23400 NC_017632.1 4901325 4901687 D COG3112 Uncharacterized protein conserved in bacteria; hypothetical protein 4901325..4901687 Escherichia coli UM146 12703189 YP_006113512.1 CDS UM146_23405 NC_017632.1 4901725 4902519 R COG1586 S-adenosylmethionine decarboxylase; S-adenosylmethionine decarboxylase complement(4901725..4902519) Escherichia coli UM146 12703190 YP_006113513.1 CDS UM146_23410 NC_017632.1 4902535 4903401 R COG0421 Spermidine synthase; spermidine synthase complement(4902535..4903401) Escherichia coli UM146 12703191 YP_006113514.1 CDS UM146_23415 NC_017632.1 4903507 4903854 R hypothetical protein complement(4903507..4903854) Escherichia coli UM146 12703192 YP_006113515.1 CDS UM146_23420 NC_017632.1 4904020 4905570 D COG2132 Putative multicopper oxidases; multicopper oxidase 4904020..4905570 Escherichia coli UM146 12703193 YP_006113516.1 CDS UM146_23425 NC_017632.1 4905617 4908007 R COG4993 Glucose dehydrogenase; glucose dehydrogenase complement(4905617..4908007) Escherichia coli UM146 12703194 YP_006113517.1 CDS UM146_23430 NC_017632.1 4908213 4908749 D COG0634 Hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 4908213..4908749 Escherichia coli UM146 12703195 YP_006113518.1 CDS UM146_23435 NC_017632.1 4908790 4909452 R COG0288 Carbonic anhydrase; carbonic anhydrase complement(4908790..4909452) Escherichia coli UM146 12703196 YP_006113519.1 CDS UM146_23440 NC_017632.1 4909561 4910487 D COG1131 ABC-type multidrug transport system, ATPase component; putative transporter subunit: ATP-binding component of ABC superfamily protein 4909561..4910487 Escherichia coli UM146 12703197 YP_006113520.1 CDS UM146_23445 NC_017632.1 4910484 4911254 D COG0842 ABC-type multidrug transport system, permease component; hypothetical protein 4910484..4911254 Escherichia coli UM146 12703198 YP_006113521.1 CDS UM146_23450 NC_017632.1 4911359 4911799 D COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; putative PTS Enzyme IIA 4911359..4911799 Escherichia coli UM146 12703199 YP_006113522.1 CDS UM146_23455 NC_017632.1 4911863 4913092 D COG0726 Predicted xylanase/chitin deacetylase; polysaccharide deacetylase 4911863..4913092 Escherichia coli UM146 12703200 YP_006113523.1 CDS UM146_23460 NC_017632.1 4913096 4913476 R COG0853 Aspartate 1-decarboxylase; aspartate alpha-decarboxylase complement(4913096..4913476) Escherichia coli UM146 12703201 YP_006113524.1 CDS UM146_23465 NC_017632.1 4913750 4914634 D COG5464 Uncharacterized conserved protein; putative transposase 4913750..4914634 Escherichia coli UM146 12703202 YP_006113525.1 CDS panC NC_017632.1 4914716 4915567 R COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase complement(4914716..4915567) Escherichia coli UM146 12703203 YP_006113526.1 CDS panB NC_017632.1 4915579 4916373 R COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(4915579..4916373) Escherichia coli UM146 12703204 YP_006113527.1 CDS UM146_23480 NC_017632.1 4916485 4917426 R putative fimbrial-like adhesin protein complement(4916485..4917426) Escherichia coli UM146 12703205 YP_006113528.1 CDS UM146_23485 NC_017632.1 4917798 4918394 R protein yadK, putative fimbrial-like adhesin complement(4917798..4918394) Escherichia coli UM146 12703206 YP_006113529.1 CDS UM146_23490 NC_017632.1 4918421 4919035 R putative fimbrial-like adhesin protein YadL complement(4918421..4919035) Escherichia coli UM146 12703207 YP_006113530.1 CDS UM146_23495 NC_017632.1 4919041 4919607 R putative fimbrial-like adhesin protein YadM complement(4919041..4919607) Escherichia coli UM146 12703208 YP_006113531.1 CDS UM146_23500 NC_017632.1 4919624 4922212 R COG3188 P pilus assembly protein, porin PapC; putative outer membrane usher protein complement(4919624..4922212) Escherichia coli UM146 12703209 YP_006113532.1 CDS UM146_23505 NC_017632.1 4922247 4922987 R COG3121 P pilus assembly protein, chaperone PapD; putative chaperone protein EcpD complement(4922247..4922987) Escherichia coli UM146 12703210 YP_006113533.1 CDS UM146_23510 NC_017632.1 4923096 4923686 R COG3539 P pilus assembly protein, pilin FimA; fimbrial-like protein complement(4923096..4923686) Escherichia coli UM146 12703211 YP_006113534.1 CDS UM146_23515 NC_017632.1 4924048 4924527 R COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(4924048..4924527) Escherichia coli UM146 12703212 YP_006113535.1 CDS pcnB NC_017632.1 4924524 4925888 R COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; poly(A) polymerase I complement(4924524..4925888) Escherichia coli UM146 12703213 YP_006113536.1 CDS UM146_23525 NC_017632.1 4925981 4926907 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-Q tRNA(Asp) synthetase complement(4925981..4926907) Escherichia coli UM146 12703214 YP_006113537.1 CDS dksA NC_017632.1 4926944 4927399 R COG1734 DnaK suppressor protein; RNA polymerase-binding transcription factor complement(4926944..4927399) Escherichia coli UM146 12703215 YP_006113538.1 CDS UM146_23535 NC_017632.1 4927577 4928281 R COG1489 DNA-binding protein, stimulates sugar fermentation; sugar fermentation stimulation protein A complement(4927577..4928281) Escherichia coli UM146 12703216 YP_006113539.1 CDS UM146_23540 NC_017632.1 4928296 4928826 R COG1514 2'-5' RNA ligase; 2'-5' RNA ligase complement(4928296..4928826) Escherichia coli UM146 12703217 YP_006113540.1 CDS UM146_23545 NC_017632.1 4928900 4931329 D COG1643 HrpA-like helicases; ATP-dependent RNA helicase HrpB 4928900..4931329 Escherichia coli UM146 12703218 YP_006113541.1 CDS UM146_23550 NC_017632.1 4931326 4931436 D hypothetical protein 4931326..4931436 Escherichia coli UM146 12703219 YP_006113542.1 CDS mrcB NC_017632.1 4931423 4933957 D COG0744 Membrane carboxypeptidase (penicillin-binding protein); penicillin-binding protein 1b 4931423..4933957 Escherichia coli UM146 12703220 YP_006113543.1 CDS UM146_23560 NC_017632.1 4934022 4934156 R hypothetical protein complement(4934022..4934156) Escherichia coli UM146 12703221 YP_006113544.1 CDS UM146_23565 NC_017632.1 4934177 4936420 D COG1629 Outer membrane receptor proteins, mostly Fe transport; ferrichrome outer membrane transporter 4934177..4936420 Escherichia coli UM146 12703222 YP_006113545.1 CDS UM146_23570 NC_017632.1 4936471 4937268 D COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron-hydroxamate transporter ATP-binding subunit 4936471..4937268 Escherichia coli UM146 12703223 YP_006113546.1 CDS UM146_23575 NC_017632.1 4937268 4938158 D COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron-hydroxamate transporter substrate-binding subunit 4937268..4938158 Escherichia coli UM146 12703224 YP_006113547.1 CDS UM146_23580 NC_017632.1 4938155 4940137 D COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron-hydroxamate transporter permease subunit 4938155..4940137 Escherichia coli UM146 12703225 YP_006113548.1 CDS UM146_23585 NC_017632.1 4940172 4941452 R COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase complement(4940172..4941452) Escherichia coli UM146 12703226 YP_006113549.1 CDS UM146_23590 NC_017632.1 4941677 4943098 D COG0038 Chloride channel protein EriC; chloride channel protein 4941677..4943098 Escherichia coli UM146 12703227 YP_006113550.1 CDS UM146_23595 NC_017632.1 4943180 4943524 D COG0316 Uncharacterized conserved protein; iron-sulfur cluster insertion protein ErpA 4943180..4943524 Escherichia coli UM146 12703228 YP_006113551.1 CDS UM146_23600 NC_017632.1 4943571 4944194 R COG2860 Predicted membrane protein; hypothetical protein complement(4943571..4944194) Escherichia coli UM146 12703229 YP_006113552.1 CDS UM146_23605 NC_017632.1 4944232 4945032 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; vitamin B12-transporter protein BtuF complement(4944232..4945032) Escherichia coli UM146 12703230 YP_006113553.1 CDS UM146_23610 NC_017632.1 4945025 4945723 R COG0775 Nucleoside phosphorylase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(4945025..4945723) Escherichia coli UM146 12703231 YP_006113554.1 CDS dgt NC_017632.1 4945807 4947324 D COG0232 dGTP triphosphohydrolase; deoxyguanosinetriphosphate triphosphohydrolase 4945807..4947324 Escherichia coli UM146 12703232 YP_006113555.1 CDS UM146_23620 NC_017632.1 4947454 4948878 D COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine endoprotease 4947454..4948878 Escherichia coli UM146 12703233 YP_006113556.1 CDS UM146_23625 NC_017632.1 4949056 4950186 D COG3835 Sugar diacid utilization regulator; carbohydrate diacid transcriptional activator CdaR 4949056..4950186 Escherichia coli UM146 12703234 YP_006113557.1 CDS UM146_23630 NC_017632.1 4950240 4950626 R hypothetical protein complement(4950240..4950626) Escherichia coli UM146 12703235 YP_006113558.1 CDS dapD NC_017632.1 4950937 4951761 R COG2171 Tetrahydrodipicolinate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(4950937..4951761) Escherichia coli UM146 12703236 YP_006113559.1 CDS UM146_23640 NC_017632.1 4951792 4954464 R COG2844 UTP:GlnB (protein PII) uridylyltransferase; PII uridylyl-transferase complement(4951792..4954464) Escherichia coli UM146 12703237 YP_006113560.1 CDS UM146_23645 NC_017632.1 4954526 4955320 R COG0024 Methionine aminopeptidase; methionine aminopeptidase complement(4954526..4955320) Escherichia coli UM146 12703238 YP_006113561.1 CDS rpsB NC_017632.1 4955688 4956413 D COG0052 Ribosomal protein S2; 30S ribosomal protein S2 4955688..4956413 Escherichia coli UM146 12703239 YP_006113562.1 CDS tsf NC_017632.1 4956548 4957399 D COG0264 Translation elongation factor Ts; elongation factor Ts 4956548..4957399 Escherichia coli UM146 12703240 YP_006113563.1 CDS pyrH NC_017632.1 4957546 4958271 D COG0528 Uridylate kinase; uridylate kinase 4957546..4958271 Escherichia coli UM146 12703241 YP_006113564.1 CDS frr NC_017632.1 4958421 4958978 D COG0233 Ribosome recycling factor; ribosome recycling factor 4958421..4958978 Escherichia coli UM146 12703242 YP_006113565.1 CDS UM146_23670 NC_017632.1 4959070 4960266 D COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4959070..4960266 Escherichia coli UM146 12703243 YP_006113566.1 CDS UM146_23675 NC_017632.1 4960455 4961213 D COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase 4960455..4961213 Escherichia coli UM146 12703244 YP_006113567.1 CDS cdsA NC_017632.1 4961226 4962083 D COG0575 CDP-diglyceride synthetase; CDP-diglyceride synthase 4961226..4962083 Escherichia coli UM146 12703245 YP_006113568.1 CDS UM146_23685 NC_017632.1 4962095 4963447 D COG0750 Predicted membrane-associated Zn-dependent proteases 1; zinc metallopeptidase RseP 4962095..4963447 Escherichia coli UM146 12703246 YP_006113569.1 CDS UM146_23690 NC_017632.1 4963477 4965909 D COG4775 Outer membrane protein/protective antigen OMA87; outer membrane protein assembly factor YaeT 4963477..4965909 Escherichia coli UM146 12703247 YP_006113570.1 CDS UM146_23695 NC_017632.1 4966031 4966516 D COG2825 Outer membrane protein; periplasmic chaperone 4966031..4966516 Escherichia coli UM146 12703248 YP_006113571.1 CDS lpxD NC_017632.1 4966520 4967545 D COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 4966520..4967545 Escherichia coli UM146 12703249 YP_006113572.1 CDS fabZ NC_017632.1 4967650 4968105 D COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase 4967650..4968105 Escherichia coli UM146 12703250 YP_006113573.1 CDS UM146_23710 NC_017632.1 4968109 4968897 D COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase 4968109..4968897 Escherichia coli UM146 12703251 YP_006113574.1 CDS lpxB NC_017632.1 4968897 4970045 D COG0763 Lipid A disaccharide synthetase; lipid-A-disaccharide synthase 4968897..4970045 Escherichia coli UM146 12703252 YP_006113575.1 CDS rnhB NC_017632.1 4970042 4970638 D COG0164 Ribonuclease HII; ribonuclease HII 4970042..4970638 Escherichia coli UM146 12703253 YP_006113576.1 CDS dnaE NC_017632.1 4970675 4974157 D COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 4970675..4974157 Escherichia coli UM146 12703254 YP_006113577.1 CDS UM146_23730 NC_017632.1 4974170 4975129 D COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 4974170..4975129 Escherichia coli UM146 12703255 YP_006113578.1 CDS UM146_23735 NC_017632.1 4975227 4977368 D COG1982 Arginine/lysine/ornithine decarboxylases; lysine decarboxylase, constitutive 4975227..4977368 Escherichia coli UM146 12703256 YP_006113579.1 CDS UM146_23740 NC_017632.1 4977425 4977814 D COG0346 Lactoylglutathione lyase and related lyases; hypothetical protein 4977425..4977814 Escherichia coli UM146 12703257 YP_006113580.1 CDS tilS NC_017632.1 4977879 4979177 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthetase 4977879..4979177 Escherichia coli UM146 12703258 YP_006113581.1 CDS UM146_23750 NC_017632.1 4979225 4979485 R COG4568 Transcriptional antiterminator; Rho-binding antiterminator complement(4979225..4979485) Escherichia coli UM146 12703259 YP_006113582.1 CDS UM146_23755 NC_017632.1 4979472 4979672 R hypothetical protein complement(4979472..4979672) Escherichia coli UM146 12703260 YP_006113583.1 CDS UM146_23760 NC_017632.1 4979838 4980383 D COG4681 Uncharacterized protein conserved in bacteria; hypothetical protein 4979838..4980383 Escherichia coli UM146 12703261 YP_006113584.1 CDS UM146_23765 NC_017632.1 4980380 4980802 D COG1186 Protein chain release factor B; peptidyl-tRNA hydrolase domain-containing protein 4980380..4980802 Escherichia coli UM146 12703262 YP_006113585.1 CDS UM146_23770 NC_017632.1 4980816 4981526 D COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance; lipoprotein involved with copper homeostasis and adhesion 4980816..4981526 Escherichia coli UM146 12703263 YP_006113586.1 CDS UM146_23775 NC_017632.1 4981682 4982506 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein complement(4981682..4982506) Escherichia coli UM146 12703264 YP_006113587.1 CDS UM146_23780 NC_017632.1 4982559 4984277 R COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(4982559..4984277) Escherichia coli UM146 12703265 YP_006113588.1 CDS UM146_23785 NC_017632.1 4984388 4985095 R COG1720 Uncharacterized conserved protein; hypothetical protein complement(4984388..4985095) Escherichia coli UM146 12703266 YP_006113589.1 CDS rcsF NC_017632.1 4985092 4985496 R outer membrane lipoprotein complement(4985092..4985496) Escherichia coli UM146 12703267 YP_006113590.1 CDS metQ NC_017632.1 4985614 4986429 R COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; DL-methionine transporter substrate-binding subunit complement(4985614..4986429) Escherichia coli UM146 12703268 YP_006113591.1 CDS UM146_23800 NC_017632.1 4986469 4987122 R COG2011 ABC-type metal ion transport system, permease component; DL-methionine transporter permease complement(4986469..4987122) Escherichia coli UM146 12703269 YP_006113592.1 CDS metN NC_017632.1 4987115 4988146 R COG1135 ABC-type metal ion transport system, ATPase component; DL-methionine transporter ATP-binding subunit complement(4987115..4988146) Escherichia coli UM146 12703270 YP_006113593.1 CDS UM146_23810 NC_017632.1 4988334 4988906 D COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase 4988334..4988906 Escherichia coli UM146 12703271 UM146_t23817 tRNA UM146_t23817 NC_017632.1 999 1074 D tRNA-Thr 999..1074 Escherichia coli UM146 12702841 UM146_t23819 tRNA UM146_t23819 NC_017632.1 100456 100542 D tRNA-Leu 100456..100542 Escherichia coli UM146 12698614 UM146_t23821 tRNA UM146_t23821 NC_017632.1 104319 104395 D tRNA-Met 104319..104395 Escherichia coli UM146 12698617 UM146_t23823 tRNA UM146_t23823 NC_017632.1 198955 199030 R tRNA-Met complement(198955..199030) Escherichia coli UM146 12698706 UM146_t23825 tRNA UM146_t23825 NC_017632.1 354435 354510 R tRNA-Phe complement(354435..354510) Escherichia coli UM146 12698849 UM146_t23827 tRNA UM146_t23827 NC_017632.1 464525 464598 D tRNA-Gly 464525..464598 Escherichia coli UM146 12698954 UM146_t23829 tRNA UM146_t23829 NC_017632.1 540401 540477 R tRNA-Met complement(540401..540477) Escherichia coli UM146 12699009 UM146_t23831 tRNA UM146_t23831 NC_017632.1 540512 540588 R tRNA-Met complement(540512..540588) Escherichia coli UM146 12699010 UM146_t23833 tRNA UM146_t23833 NC_017632.1 540622 540698 R tRNA-Met complement(540622..540698) Escherichia coli UM146 12699011 UM146_t23835 tRNA UM146_t23835 NC_017632.1 665389 665481 D tRNA-Ser 665389..665481 Escherichia coli UM146 12699132 UM146_t23837 tRNA UM146_t23837 NC_017632.1 665485 665561 D tRNA-Arg 665485..665561 Escherichia coli UM146 12699133 UM146_t23839 tRNA UM146_t23839 NC_017632.1 665626 665702 D tRNA-Arg 665626..665702 Escherichia coli UM146 12699134 UM146_t23841 tRNA UM146_t23841 NC_017632.1 665766 665842 D tRNA-Arg 665766..665842 Escherichia coli UM146 12699135 UM146_t23843 tRNA UM146_t23843 NC_017632.1 768693 768768 D tRNA-Glu 768693..768768 Escherichia coli UM146 12699258 UM146_t23845 tRNA UM146_t23845 NC_017632.1 961178 961253 R tRNA-Lys complement(961178..961253) Escherichia coli UM146 12699428 UM146_t23847 tRNA UM146_t23847 NC_017632.1 961258 961333 R tRNA-Val complement(961258..961333) Escherichia coli UM146 12699429 UM146_t23849 tRNA UM146_t23849 NC_017632.1 961381 961456 R tRNA-Val complement(961381..961456) Escherichia coli UM146 12699430 UM146_t23851 tRNA UM146_t23851 NC_017632.1 961501 961576 R tRNA-Val complement(961501..961576) Escherichia coli UM146 12699431 UM146_t23853 tRNA UM146_t23853 NC_017632.1 964275 964350 D tRNA-Ala 964275..964350 Escherichia coli UM146 12699435 UM146_t23855 tRNA UM146_t23855 NC_017632.1 964390 964465 D tRNA-Ala 964390..964465 Escherichia coli UM146 12699436 UM146_t23857 tRNA UM146_t23857 NC_017632.1 1045043 1045117 R tRNA-Arg complement(1045043..1045117) Escherichia coli UM146 12699527 UM146_t23859 tRNA UM146_t23859 NC_017632.1 1216071 1216147 R tRNA-Pro complement(1216071..1216147) Escherichia coli UM146 12699681 UM146_t23861 tRNA UM146_t23861 NC_017632.1 1528390 1528465 R tRNA-Asn complement(1528390..1528465) Escherichia coli UM146 12699939 UM146_t23863 tRNA UM146_t23863 NC_017632.1 1529291 1529366 R tRNA-Asn complement(1529291..1529366) Escherichia coli UM146 12699942 UM146_t23865 tRNA UM146_t23865 NC_017632.1 1531700 1531775 R tRNA-Asn complement(1531700..1531775) Escherichia coli UM146 12699945 UM146_t23867 tRNA UM146_t23867 NC_017632.1 1533521 1533596 D tRNA-Asn 1533521..1533596 Escherichia coli UM146 12699947 UM146_t23869 tRNA UM146_t23869 NC_017632.1 1573419 1573494 R tRNA-Asn complement(1573419..1573494) Escherichia coli UM146 12699968 UM146_t23871 tRNA UM146_t23871 NC_017632.1 1574486 1574575 D tRNA-Ser 1574486..1574575 Escherichia coli UM146 12699970 UM146_t23873 tRNA UM146_t23873 NC_017632.1 1627426 1627501 D tRNA-Gly 1627426..1627501 Escherichia coli UM146 12700029 UM146_t23875 tRNA UM146_t23875 NC_017632.1 1627555 1627628 D tRNA-Cys 1627555..1627628 Escherichia coli UM146 12700030 UM146_t23877 tRNA UM146_t23877 NC_017632.1 1627641 1627727 D tRNA-Leu 1627641..1627727 Escherichia coli UM146 12700031 UM146_t23879 tRNA UM146_t23879 NC_017632.1 1860927 1861003 R tRNA-Val complement(1860927..1861003) Escherichia coli UM146 12700268 UM146_t23881 tRNA UM146_t23881 NC_017632.1 1861008 1861084 R tRNA-Val complement(1861008..1861084) Escherichia coli UM146 12700269 UM146_t23883 tRNA UM146_t23883 NC_017632.1 2237481 2237557 R tRNA-Arg complement(2237481..2237557) Escherichia coli UM146 12700626 UM146_t23885 tRNA UM146_t23885 NC_017632.1 2237571 2237647 R tRNA-Arg complement(2237571..2237647) Escherichia coli UM146 12700627 UM146_t23887 tRNA UM146_t23887 NC_017632.1 2237655 2237730 R tRNA-Met complement(2237655..2237730) Escherichia coli UM146 12700628 UM146_t23889 tRNA UM146_t23889 NC_017632.1 2279818 2279902 D tRNA-Tyr 2279818..2279902 Escherichia coli UM146 12700673 UM146_t23891 tRNA UM146_t23891 NC_017632.1 2279936 2280020 D tRNA-Tyr 2279936..2280020 Escherichia coli UM146 12700674 UM146_t23893 tRNA UM146_t23893 NC_017632.1 2499727 2499814 D tRNA-Ser 2499727..2499814 Escherichia coli UM146 12700925 UM146_t23895 tRNA UM146_t23895 NC_017632.1 2521802 2521878 R tRNA-Arg complement(2521802..2521878) Escherichia coli UM146 12700949 UM146_t23897 tRNA UM146_t23897 NC_017632.1 2613309 2613396 D tRNA-Ser 2613309..2613396 Escherichia coli UM146 12701039 UM146_t23899 tRNA UM146_t23899 NC_017632.1 2709278 2709365 D tRNA-Ser 2709278..2709365 Escherichia coli UM146 12701117 UM146_t23901 tRNA UM146_t23901 NC_017632.1 2870589 2870664 R tRNA-OTHER complement(2870589..2870664) Escherichia coli UM146 12701274 UM146_t23903 tRNA UM146_t23903 NC_017632.1 2870715 2870790 R tRNA-Lys complement(2870715..2870790) Escherichia coli UM146 12701275 UM146_t23905 tRNA UM146_t23905 NC_017632.1 2943150 2943226 D tRNA-Met 2943150..2943226 Escherichia coli UM146 12701340 UM146_t23907 tRNA UM146_t23907 NC_017632.1 2943237 2943321 D tRNA-Leu 2943237..2943321 Escherichia coli UM146 12701341 UM146_t23909 tRNA UM146_t23909 NC_017632.1 2943345 2943419 D tRNA-Gln 2943345..2943419 Escherichia coli UM146 12701342 UM146_t23911 tRNA UM146_t23911 NC_017632.1 2943454 2943528 D tRNA-Gln 2943454..2943528 Escherichia coli UM146 12701343 UM146_t23913 tRNA UM146_t23913 NC_017632.1 2943544 2943620 D tRNA-Met 2943544..2943620 Escherichia coli UM146 12701344 UM146_t23915 tRNA UM146_t23915 NC_017632.1 2943669 2943743 D tRNA-Gln 2943669..2943743 Escherichia coli UM146 12701345 UM146_t23917 tRNA UM146_t23917 NC_017632.1 2943782 2943856 D tRNA-Gln 2943782..2943856 Escherichia coli UM146 12701346 UM146_t23919 tRNA UM146_t23919 NC_017632.1 3045965 3046040 R tRNA-OTHER complement(3045965..3046040) Escherichia coli UM146 12701441 UM146_t23921 tRNA UM146_t23921 NC_017632.1 3239697 3239777 R tRNA-OTHER complement(3239697..3239777) Escherichia coli UM146 12701627 UM146_t23923 tRNA UM146_t23923 NC_017632.1 3309290 3309365 R tRNA-Thr complement(3309290..3309365) Escherichia coli UM146 12701686 UM146_t23925 tRNA UM146_t23925 NC_017632.1 3321997 3322072 R tRNA-Thr complement(3321997..3322072) Escherichia coli UM146 12701698 UM146_t23927 tRNA UM146_t23927 NC_017632.1 3375161 3375237 R tRNA-Asp complement(3375161..3375237) Escherichia coli UM146 12701747 UM146_t23929 tRNA UM146_t23929 NC_017632.1 3383382 3383458 R tRNA-Asp complement(3383382..3383458) Escherichia coli UM146 12701758 UM146_t23931 tRNA UM146_t23931 NC_017632.1 3386815 3386890 R tRNA-Ala complement(3386815..3386890) Escherichia coli UM146 12701761 UM146_t23933 tRNA UM146_t23933 NC_017632.1 3386933 3387009 R tRNA-Ile complement(3386933..3387009) Escherichia coli UM146 12701762 UM146_t23935 tRNA UM146_t23935 NC_017632.1 3431354 3431429 R tRNA-Thr complement(3431354..3431429) Escherichia coli UM146 12701826 UM146_t23937 tRNA UM146_t23937 NC_017632.1 3431436 3431510 R tRNA-Gly complement(3431436..3431510) Escherichia coli UM146 12701827 UM146_t23939 tRNA UM146_t23939 NC_017632.1 3431627 3431711 R tRNA-Tyr complement(3431627..3431711) Escherichia coli UM146 12701828 UM146_t23941 tRNA UM146_t23941 NC_017632.1 3431720 3431795 R tRNA-Thr complement(3431720..3431795) Escherichia coli UM146 12701829 UM146_t23943 tRNA UM146_t23943 NC_017632.1 3438572 3438647 R tRNA-Glu complement(3438572..3438647) Escherichia coli UM146 12701835 UM146_t23945 tRNA UM146_t23945 NC_017632.1 3717943 3718019 R tRNA-Pro complement(3717943..3718019) Escherichia coli UM146 12702087 UM146_t23947 tRNA UM146_t23947 NC_017632.1 3843913 3844007 D tRNA-Sec 3843913..3844007 Escherichia coli UM146 12702199 UM146_t23949 tRNA UM146_t23949 NC_017632.1 3946364 3946439 D tRNA-Glu 3946364..3946439 Escherichia coli UM146 12702292 UM146_t23951 tRNA UM146_t23951 NC_017632.1 3949801 3949877 D tRNA-Asp 3949801..3949877 Escherichia coli UM146 12702295 UM146_t23953 tRNA UM146_t23953 NC_017632.1 3949886 3949961 D tRNA-Trp 3949886..3949961 Escherichia coli UM146 12702296 UM146_t23955 tRNA UM146_t23955 NC_017632.1 3984428 3984504 D tRNA-Arg 3984428..3984504 Escherichia coli UM146 12702328 UM146_t23957 tRNA UM146_t23957 NC_017632.1 3984563 3984638 D tRNA-His 3984563..3984638 Escherichia coli UM146 12702329 UM146_t23959 tRNA UM146_t23959 NC_017632.1 3984659 3984745 D tRNA-Leu 3984659..3984745 Escherichia coli UM146 12702330 UM146_t23961 tRNA UM146_t23961 NC_017632.1 3984788 3984864 D tRNA-Pro 3984788..3984864 Escherichia coli UM146 12702331 UM146_t23963 tRNA UM146_t23963 NC_017632.1 4064755 4064831 D tRNA-Ile 4064755..4064831 Escherichia coli UM146 12702404 UM146_t23965 tRNA UM146_t23965 NC_017632.1 4064874 4064949 D tRNA-Ala 4064874..4064949 Escherichia coli UM146 12702405 UM146_t23967 tRNA UM146_t23967 NC_017632.1 4199272 4199347 D tRNA-Glu 4199272..4199347 Escherichia coli UM146 12702526 UM146_t23969 tRNA UM146_t23969 NC_017632.1 4375936 4376011 R tRNA-Phe complement(4375936..4376011) Escherichia coli UM146 12702686 UM146_t23971 tRNA UM146_t23971 NC_017632.1 4405444 4405519 D tRNA-Gly 4405444..4405519 Escherichia coli UM146 12702718 UM146_t23973 tRNA UM146_t23973 NC_017632.1 4405556 4405632 D tRNA-Gly 4405556..4405632 Escherichia coli UM146 12702719 UM146_t23975 tRNA UM146_t23975 NC_017632.1 4405668 4405743 D tRNA-Gly 4405668..4405743 Escherichia coli UM146 12702720 UM146_t23977 tRNA UM146_t23977 NC_017632.1 4519381 4519465 D tRNA-Leu 4519381..4519465 Escherichia coli UM146 12702832 UM146_t23979 tRNA UM146_t23979 NC_017632.1 4725108 4725194 R tRNA-Leu complement(4725108..4725194) Escherichia coli UM146 12703026 UM146_t23981 tRNA UM146_t23981 NC_017632.1 4725229 4725317 R tRNA-Leu complement(4725229..4725317) Escherichia coli UM146 12703027 UM146_t23983 tRNA UM146_t23983 NC_017632.1 4725345 4725431 R tRNA-Leu complement(4725345..4725431) Escherichia coli UM146 12703028 UM146_t23985 tRNA UM146_t23985 NC_017632.1 4990882 4990958 D tRNA-Ile 4990882..4990958 Escherichia coli UM146 12703273 UM146_t23987 tRNA UM146_t23987 NC_017632.1 4991001 4991076 D tRNA-Ala 4991001..4991076 Escherichia coli UM146 12703274 UM146_r23989 rRNA UM146_r23989 NC_017632.1 869 984 D 5S ribosomal RNA 869..984 Escherichia coli UM146 12702730 UM146_r23991 rRNA UM146_r23991 NC_017632.1 1114 1229 D 5S ribosomal RNA 1114..1229 Escherichia coli UM146 12703035 UM146_r24005 rRNA UM146_r24005 NC_017632.1 767066 768619 D 16S ribosomal RNA 767066..768619 Escherichia coli UM146 12699257 UM146_r24019 rRNA UM146_r24019 NC_017632.1 768962 771867 D 23S ribosomal RNA 768962..771867 Escherichia coli UM146 12699259 UM146_r23993 rRNA UM146_r23993 NC_017632.1 771966 772081 D 5S ribosomal RNA 771966..772081 Escherichia coli UM146 12699260 UM146_r23995 rRNA UM146_r23995 NC_017632.1 3383512 3383627 R 5S ribosomal RNA complement(3383512..3383627) Escherichia coli UM146 12701759 UM146_r24021 rRNA UM146_r24021 NC_017632.1 3383726 3386631 R 23S ribosomal RNA complement(3383726..3386631) Escherichia coli UM146 12701760 UM146_r24007 rRNA UM146_r24007 NC_017632.1 3387068 3388619 R 16S ribosomal RNA complement(3387068..3388619) Escherichia coli UM146 12701763 UM146_r23997 rRNA UM146_r23997 NC_017632.1 3435263 3435378 R 5S ribosomal RNA complement(3435263..3435378) Escherichia coli UM146 12701833 UM146_r24023 rRNA UM146_r24023 NC_017632.1 3435473 3438378 R 23S ribosomal RNA complement(3435473..3438378) Escherichia coli UM146 12701834 UM146_r24009 rRNA UM146_r24009 NC_017632.1 3438721 3440274 R 16S ribosomal RNA complement(3438721..3440274) Escherichia coli UM146 12701836 UM146_r24011 rRNA UM146_r24011 NC_017632.1 3944737 3946290 D 16S ribosomal RNA 3944737..3946290 Escherichia coli UM146 12702291 UM146_r24025 rRNA UM146_r24025 NC_017632.1 3946633 3949538 D 23S ribosomal RNA 3946633..3949538 Escherichia coli UM146 12702293 UM146_r23999 rRNA UM146_r23999 NC_017632.1 3949632 3949747 D 5S ribosomal RNA 3949632..3949747 Escherichia coli UM146 12702294 UM146_r24013 rRNA UM146_r24013 NC_017632.1 4063145 4064698 D 16S ribosomal RNA 4063145..4064698 Escherichia coli UM146 12702403 UM146_r24027 rRNA UM146_r24027 NC_017632.1 4065133 4068038 D 23S ribosomal RNA 4065133..4068038 Escherichia coli UM146 12702406 UM146_r24001 rRNA UM146_r24001 NC_017632.1 4068132 4068247 D 5S ribosomal RNA 4068132..4068247 Escherichia coli UM146 12702407 UM146_r24015 rRNA UM146_r24015 NC_017632.1 4197645 4199198 D 16S ribosomal RNA 4197645..4199198 Escherichia coli UM146 12702525 UM146_r24029 rRNA UM146_r24029 NC_017632.1 4199541 4202446 D 23S ribosomal RNA 4199541..4202446 Escherichia coli UM146 12702527 UM146_r24003 rRNA UM146_r24003 NC_017632.1 4202545 4202660 D 5S ribosomal RNA 4202545..4202660 Escherichia coli UM146 12702528 UM146_r24017 rRNA UM146_r24017 NC_017632.1 4989272 4990825 D 16S ribosomal RNA 4989272..4990825 Escherichia coli UM146 12703272 UM146_r24031 rRNA UM146_r24031 NC_017632.1 4991251 >4993013 D 23S ribosomal RNA 4991251..>4993013 Escherichia coli UM146 12703275