-- dump date 20120504_144416 -- class Genbank::CDS -- table cds_note -- id note YP_002935946.1 Cytoplasmic, score:9.98; COG0593 ATPase involved in DNA replication initiation; KEGG:K02313 chromosomal replication initiation protein; HMMPfam:IPR013159; HMMPfam:IPR013317; FPrintScan:IPR001957; HMMSmart:IPR003593; HMMSmart:IPR013159; HMMTigr:IPR001957; ScanRegExp:IPR001957; superfamily:IPR010921 YP_002935947.1 Cytoplasmic, score:8.87; COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); KEGG:K00961 DNA polymerase III, beta subunit HMMPfam:IPR001001; Gene3D:IPR001001; HMMSmart:IPR001001; HMMTigr:IPR001001 YP_002935948.1 Unknown cell location; COG2501 Uncharacterized conserved protein YP_002935949.1 Cytoplasmic, score:8.87; COG1195 Recombinational DNA repair ATPase (RecF pathway); KEGG:K03629 DNA replication and repair protein RecF; HMMPfam:IPR003395; HMMTigr:IPR001238; ScanRegExp:IPR001238 YP_002935950.1 Cytoplasmic, score:8.87; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; KEGG:K02470 DNA gyrase, B subunit HMMPfam:IPR002288; HMMPfam:IPR003594; HMMPfam:IPR006171; HMMPfam:IPR013506; BlastProDom:IPR011558; FPrintScan:IPR000565; FPrintScan:IPR001241; Gene3D:IPR003594; Gene3D:IPR013759; Gene3D:IPR014721; HMMSmart:IPR001241; HMMSmart:IPR003594; HMMTigr:IPR011557; ScanRegExp:IPR001241; superfamily:IPR003594; superfamily:IPR013760 YP_002935951.1 Cytoplasmic, score:8.87; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; KEGG:K02469 DNA gyrase, A subunit HMMPfam:IPR002205; HMMPfam:IPR006691; BlastProDom:IPR002205; Gene3D:IPR013757; Gene3D:IPR013758; HMMSmart:IPR002205; HMMTigr:IPR005743; superfamily:IPR013760 YP_002935952.1 Cytoplasmic, score:8.87; COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; KEGG:K01675 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit HMMPfam:IPR004646; HMMTigr:IPR004646 YP_002935953.1 Extracellular, score:8.82 YP_002935954.1 Cytoplasmic, score:8.87; COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain; KEGG:K01678 fumarate hydratase subunit B HMMPfam:IPR004647; Gene3D:IPR004647; HMMTigr:IPR004647 YP_002935955.1 Cytoplasmic, score:8.87; COG0673 Predicted dehydrogenases and related proteins; KEGG:0putative oxidoreductase HMMPfam:IPR000683; HMMPfam:IPR004104; ScanRegExp:IPR000583 YP_002935956.1 Unknown cell location; COG1349 Transcriptional regulators of sugar metabolism; KEGG:K03436 transcription repressor of fructose operon FruR; HMMPfam:IPR001034; HMMPfam:IPR014036; FPrintScan:IPR001034; HMMSmart:IPR001034; ScanRegExp:IPR001034 YP_002935957.1 Unknown cell location; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); KEGG:K00882 fructose-1-phosphate kinase HMMPfam:IPR011611; ScanRegExp:IPR002173 YP_002935958.1 CytoplasmicMembrane, score:10.00; COG1299 Phosphotransferase system, fructose-specific IIC component; KEGG:K00890 PTS system, fructose-specific, IIABC component HMMPfam:IPR002178; HMMPfam:IPR003352; HMMPfam:IPR003353; BlastProDom:IPR002178; Gene3D:IPR002178; HMMTigr:IPR003353; HMMTigr:IPR004715; HMMTigr:IPR006327; ScanRegExp:IPR002178 YP_002935959.1 Cytoplasmic, score:9.65; COG0443 Molecular chaperone; KEGG:K08070 chaperone protein DnaK HMMPfam:IPR013126; BlastProDom:IPR013126; FPrintScan:IPR001023; HMMPanther:IPR001023; HMMTigr:IPR012725; ScanRegExp:IPR013126 YP_002935960.1 Cytoplasmic, score:8.87; COG5244 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B YP_002935961.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07659 DNA-binding response regulator; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002935962.1 CytoplasmicMembrane, score:9.97; COG0642 Signal transduction histidine kinase; KEGG:0hypothetical protein HMMPfam:IPR003594; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002935963.1 Cytoplasmic, score:9.98; COG1048 Aconitase A; KEGG:K01680 hypothetical protein HMMPfam:IPR000573; HMMPfam:IPR001030; BlastProDom:IPR001030; FPrintScan:IPR001030; Gene3D:IPR015928; Gene3D:IPR015931; Gene3D:IPR015932; HMMPanther:IPR015935; HMMPanther:IPR015937; superfamily:IPR001030; superfamily:IPR015928 YP_002935964.1 CytoplasmicMembrane, score:9.99; COG0628 Predicted permease; KEGG:K03548 protein of unknown function UPF0118; HMMPfam:IPR002549; HMMPanther:IPR002549; ScanRegExp:IPR000719 YP_002935965.1 Cytoplasmic, score:8.87; COG0419 ATPase involved in DNA repair; HMMPfam:IPR013105; Gene3D:IPR011990 YP_002935966.1 Cytoplasmic, score:8.87; COG0296 1,4-alpha-glucan branching enzyme; KEGG:K00700 1,4-alpha-glucan branching enzyme HMMPfam:IPR004193; HMMPfam:IPR006047; HMMPfam:IPR006048; Gene3D:IPR013780; Gene3D:IPR013781; Gene3D:IPR013783; HMMSmart:IPR006589; HMMTigr:IPR006407 YP_002935967.1 Cytoplasmic, score:8.87; COG4733 Phage-related protein, tail component YP_002935968.1 Unknown cell location; COG0860 N-acetylmuramoyl-L-alanine amidase; KEGG:K01446 germination-specific N-acetylmuramoyl-L-alanine amidase HMMPfam:IPR002508; Gene3D:IPR002508; HMMSmart:IPR002508 YP_002935969.1 Unknown cell location; COG3858 Predicted glycosyl hydrolase; KEGG:K06306 hypothetical protein; HMMPfam:IPR001223; Gene3D:IPR013781; HMMSmart:IPR003646; HMMSmart:IPR011583; ScanRegExp:IPR001579 YP_002935970.1 Cytoplasmic, score:8.87 YP_002935971.1 Cytoplasmic, score:8.87 YP_002935972.1 CytoplasmicMembrane, score:9.49; COG0515 Serine/threonine protein kinase; KEGG:K08884 serine/threonine protein kinase fused to TPR repeats domain HMMPfam:IPR000719; BlastProDom:IPR000719; HMMSmart:IPR002290; superfamily:IPR011009 YP_002935973.1 Unknown cell location YP_002935974.1 Cytoplasmic, score:8.87; COG4862 Negative regulator of genetic competence, sporulation and motility; HMMPfam:IPR008681 YP_002935975.1 Cytoplasmic, score:8.87; NOG16895 non supervised orthologous group YP_002935976.1 Extracellular, score:9.55; COG1344 Flagellin and related hook-associated proteins; KEGG:K02406 flagellin; HMMPfam:IPR001029; HMMPfam:IPR001492; BlastProDom:IPR001029; ScanRegExp:IPR000362 YP_002935977.1 Unknown cell location; COG1516 Flagellin-specific chaperone FliS YP_002935978.1 Unknown cell location YP_002935979.1 CytoplasmicMembrane, score:9.99; NOG16686 non supervised orthologous group; HMMPfam:IPR000045 YP_002935980.1 Cytoplasmic, score:8.87 YP_002935981.1 Cytoplasmic, score:8.87; COG4962 Flp pilus assembly protein, ATPase CpaF; KEGG:K02283 Flp pilus assembly protein; HMMPfam:IPR001482; BlastProDom:IPR001482; ScanRegExp:IPR000217 YP_002935982.1 Cytoplasmic, score:8.87; COG4965 Flp pilus assembly protein TadB YP_002935983.1 Unknown cell location; COG2064 Flp pilus assembly protein TadC YP_002935984.1 Unknown cell location YP_002935985.1 Unknown cell location YP_002935986.1 Unknown cell location YP_002935987.1 CytoplasmicMembrane, score:9.99; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_002935988.1 Unknown cell location YP_002935989.1 Cytoplasmic, score:8.87; COG1716 FOG: FHA domain; HMMPfam:IPR000253; HMMSmart:IPR000253; superfamily:IPR008984 YP_002935990.1 CytoplasmicMembrane, score:9.99; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid); KEGG:K08641 hypothetical protein HMMPfam:IPR002610; HMMPanther:IPR002610 YP_002935991.1 Cytoplasmic, score:8.87 YP_002935992.1 Cytoplasmic, score:8.87; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; KEGG:K02503 cell cycle regulation histidine triad (HIT) protein; HMMPfam:IPR001310; Gene3D:IPR011151; HMMPanther:IPR001310; ScanRegExp:IPR001310; superfamily:IPR011146 YP_002935993.1 Unknown cell location; COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; KEGG:0UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase HMMPfam:IPR004276; HMMPfam:IPR007235; HMMTigr:IPR006009 YP_002935994.1 Cytoplasmic, score:8.87 YP_002935995.1 Unknown cell location; COG3773 Cell wall hydrolyses involved in spore germination; KEGG:K01449 putative spore cortex-lytic enzyme HMMPfam:IPR011105; HMMPfam:IPR013247; HMMSmart:IPR003646 YP_002935996.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway YP_002935997.1 Cytoplasmic, score:8.87; COG0340 Biotin-(acetyl-CoA carboxylase) ligase; KEGG:K01947 K03524 putative transcriptional repressor of the biotin operon birA HMMPfam:IPR003142; HMMPfam:IPR004143; HMMPfam:IPR013196; Gene3D:IPR011991; HMMPanther:IPR004408; HMMTigr:IPR004408; superfamily:IPR008988 YP_002935998.1 Cytoplasmic, score:8.87 YP_002935999.1 Cytoplasmic, score:8.87; COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor; KEGG:K03525 pantothenate kinase HMMPfam:IPR004619; HMMTigr:IPR004619 YP_002936000.1 Cytoplasmic, score:8.87; COG0042 tRNA-dihydrouridine synthase; KEGG:0tRNA-dihydrouridine synthase HMMPfam:IPR001269; Gene3D:IPR013785; HMMPIR:IPR001269; HMMPanther:IPR001269; HMMTigr:IPR004652; ScanRegExp:IPR001269 YP_002936001.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_002936002.1 Cytoplasmic, score:10.00; COG1190 Lysyl-tRNA synthetase (class II); KEGG:K04567 lysyl-tRNA synthetase HMMPfam:IPR004364; HMMPfam:IPR004365; Gene3D:IPR012340; HMMPanther:IPR002313; HMMPanther:IPR004364; HMMTigr:IPR002313 YP_002936003.1 Unknown cell location; COG3451 Type IV secretory pathway, VirB4 components YP_002936004.1 Cytoplasmic, score:8.87; NOG06536 non supervised orthologous group; HMMPfam:IPR007069 YP_002936005.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K04763 putative phage integrase/recombinase; HMMPfam:IPR002104; HMMPfam:IPR004107; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002936006.1 Unknown cell location YP_002936007.1 Unknown cell location; COG1340 Uncharacterized archaeal coiled-coil protein YP_002936008.1 Cytoplasmic, score:8.87; COG5022 Myosin heavy chain YP_002936009.1 Unknown cell location; COG0791 Cell wall-associated hydrolases (invasion-associated proteins); HMMPfam:IPR000064 YP_002936010.1 Unknown cell location; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936011.1 Cytoplasmic, score:8.87 YP_002936012.1 Cytoplasmic, score:8.87; Gene3D:IPR011067; superfamily:IPR011067 YP_002936013.1 Cytoplasmic, score:8.87; COG3547 Transposase and inactivated derivatives; KEGG:K07486 transposase; HMMPfam:IPR002525; HMMPfam:IPR003346; ScanRegExp:IPR001425 YP_002936014.1 Unknown cell location YP_002936015.1 Cytoplasmic, score:8.87 YP_002936016.1 Cytoplasmic, score:8.87 YP_002936017.1 Unknown cell location YP_002936018.1 Cytoplasmic, score:8.87; COG4974 Site-specific recombinase XerD; KEGG:K03733 integrase/recombinase, XerC/CodV family; HMMPfam:IPR002104; HMMPfam:IPR004191; Gene3D:IPR013087; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002936019.1 Cytoplasmic, score:9.98; COG0073 EMAP domain; KEGG:K01874 methionyl-tRNA synthetase HMMPfam:IPR002547; Gene3D:IPR012340 YP_002936020.1 Cytoplasmic, score:8.87; COG0789 Predicted transcriptional regulators; HMMPfam:IPR000551; HMMSmart:IPR000551; superfamily:IPR009061 YP_002936021.1 Unknown cell location YP_002936022.1 Unknown cell location YP_002936023.1 Unknown cell location; COG0419 ATPase involved in DNA repair YP_002936024.1 Unknown cell location YP_002936025.1 Unknown cell location YP_002936026.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 bacteriocin ABC transporter, ATP-binding protein, putative; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936027.1 CytoplasmicMembrane, score:9.99; NOG17940 non supervised orthologous group; KEGG:K09686 bacteriocin ABC transporter, permease protein subunit, putative YP_002936028.1 CytoplasmicMembrane, score:9.99; NOG31276 non supervised orthologous group; KEGG:K09686 bacteriocin ABC transporter, permease protein subunit, putative YP_002936029.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07775 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002936030.1 Unknown cell location; COG0642 Signal transduction histidine kinase; KEGG:0subtilin biosynthesis sensor protein SpaK HMMPfam:IPR003594; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002936031.1 Cytoplasmic, score:8.87 YP_002936032.1 Cytoplasmic, score:8.87; COG0850 Septum formation inhibitor; KEGG:K03610 septum formation inhibitor; HMMPfam:IPR005526; HMMTigr:IPR013033 YP_002936033.1 Cytoplasmic, score:8.87; COG2894 Septum formation inhibitor-activating ATPase; KEGG:K03609 septum site-determining protein MinD; HMMPfam:IPR002586; HMMTigr:IPR010223 YP_002936034.1 Cytoplasmic, score:8.87; NOG22618 non supervised orthologous group; KEGG:K03608 cell division topological specificity factor MinE; HMMPfam:IPR005527; HMMTigr:IPR005527 YP_002936035.1 CytoplasmicMembrane, score:9.26; NOG18662 non supervised orthologous group YP_002936036.1 Cytoplasmic, score:8.87; COG4992 Ornithine/acetylornithine aminotransferase; KEGG:K00818 acetylornithine delta-aminotransferase HMMPfam:IPR005814; Gene3D:IPR015421; Gene3D:IPR015422; HMMPanther:IPR004636; HMMPanther:IPR005814; HMMTigr:IPR004636; superfamily:IPR015424 YP_002936037.1 Cytoplasmic, score:8.87; NOG14451 non supervised orthologous group; KEGG:K00945 cytidylate kinase YP_002936038.1 CytoplasmicMembrane, score:10.00; COG0531 Amino acid transporters; KEGG:K03294 cationic amino acid transporter; HMMPfam:IPR004841; HMMPanther:IPR002293 YP_002936039.1 Cytoplasmic, score:9.98; COG1454 Alcohol dehydrogenase, class IV; KEGG:K00001 alcohol dehydrogenase HMMPfam:IPR001670; ScanRegExp:IPR001670 YP_002936040.1 Cytoplasmic, score:8.87; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMPfam:IPR013096; Gene3D:IPR014710; HMMSmart:IPR001387; superfamily:IPR010982; superfamily:IPR011051 YP_002936041.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002936042.1 CytoplasmicMembrane, score:10.00; COG1132 ABC-type multidrug transport system, ATPase and permease components; KEGG:K06147 hypothetical protein; HMMPfam:IPR001140; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936043.1 Cytoplasmic, score:8.87 YP_002936044.1 Unknown cell location YP_002936045.1 Cytoplasmic, score:8.87; NOG18796 non supervised orthologous group YP_002936046.1 Unknown cell location; COG1256 Flagellar hook-associated protein; KEGG:K02396 flagellar hook-associated protein FlgK; HMMPfam:IPR001444; HMMPfam:IPR010930; FPrintScan:IPR002371; HMMTigr:IPR002371; ScanRegExp:IPR001444 YP_002936047.1 Unknown cell location; COG1256 Flagellar hook-associated protein; KEGG:K02396 flagellar hook-associated protein FlgK; HMMPfam:IPR001444; HMMPfam:IPR010930; FPrintScan:IPR002371; HMMTigr:IPR002371 YP_002936048.1 Unknown cell location; COG1344 Flagellin and related hook-associated proteins; KEGG:K02397 flagellar hook-associated protein FlgL; HMMPfam:IPR001492; BlastProDom:IPR001029 YP_002936049.1 Cytoplasmic, score:9.97; COG1699 Uncharacterized protein conserved in bacteria; HMMPfam:IPR003775; ScanRegExp:IPR002114 YP_002936050.1 Unknown cell location; COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); KEGG:K03563 probable carbon storage regulator; HMMPfam:IPR003751; BlastProDom:IPR003751; HMMTigr:IPR003751 YP_002936051.1 Cytoplasmic, score:8.87; COG0789 Predicted transcriptional regulators; HMMPfam:IPR000551; HMMSmart:IPR000551; superfamily:IPR009061 YP_002936052.1 Cytoplasmic, score:8.87; COG0009 Putative translation factor (SUA5); KEGG:K07566 putative translation factor (SUA5); HMMPfam:IPR000106; HMMPfam:IPR005145; HMMPfam:IPR006070; HMMSmart:IPR000106; HMMTigr:IPR004388; superfamily:IPR000106 YP_002936053.1 Cytoplasmic, score:8.87; COG0035 Uracil phosphoribosyltransferase; KEGG:K00761 uracil phosphoribosyltransferase HMMPfam:IPR000836; HMMTigr:IPR005765 YP_002936054.1 Cytoplasmic, score:8.87; COG2131 Deoxycytidylate deaminase; KEGG:K01493 dCMP deaminase HMMPfam:IPR002125; HMMPanther:IPR015517 YP_002936055.1 Unknown cell location YP_002936056.1 CytoplasmicMembrane, score:9.26 YP_002936057.1 CytoplasmicMembrane, score:10.00; COG0356 F0F1-type ATP synthase, subunit a; KEGG:K01550 AtpB HMMPfam:IPR000568; FPrintScan:IPR000568; HMMPanther:IPR000568; HMMTigr:IPR000568; ScanRegExp:IPR000568; superfamily:IPR000568 YP_002936058.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0 YP_002936059.1 Unknown cell location; COG0711 F0F1-type ATP synthase, subunit b; HMMPfam:IPR002146; HMMTigr:IPR005864 YP_002936060.1 Cytoplasmic, score:8.87; COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein); KEGG:K02113 ATP synthase, delta (OSCP) subunit HMMPfam:IPR000711; Gene3D:IPR000711; HMMPanther:IPR000711; HMMTigr:IPR000711; superfamily:IPR000711 YP_002936061.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002936062.1 Unknown cell location; COG0224 F0F1-type ATP synthase, gamma subunit; KEGG:K01549 ATP synthase F1, gamma subunit HMMPfam:IPR000131; HMMPanther:IPR000131; HMMTigr:IPR000131; ScanRegExp:IPR000131; superfamily:IPR000131 YP_002936063.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002936064.1 mitochondrial delta subunit-like protein; Cytoplasmic, score:8.87; COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); KEGG:K02114 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit) HMMPfam:IPR001469; BlastProDom:IPR001469; Gene3D:IPR001469; HMMPanther:IPR001469; HMMTigr:IPR001469; superfamily:IPR001469 YP_002936065.1 Unknown cell location YP_002936066.1 Cytoplasmic, score:9.65; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07659 hypothetical protein; HMMPfam:IPR001867; BlastProDom:IPR001867; Gene3D:IPR011991 YP_002936067.1 CytoplasmicMembrane, score:9.75; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002936068.1 Extracellular, score:8.82 YP_002936069.1 Unknown cell location; HMMPfam:IPR001469; HMMPanther:IPR001469; superfamily:IPR001469 YP_002936070.1 Unknown cell location YP_002936071.1 Cytoplasmic, score:9.98; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K00567 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase HMMPfam:IPR000005; HMMPfam:IPR003313; Gene3D:IPR012287; Gene3D:IPR014710; HMMSmart:IPR000005; ScanRegExp:IPR010916; superfamily:IPR003313; superfamily:IPR009057 YP_002936072.1 Unknown cell location YP_002936073.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K10200 periplasmic protein; HMMPfam:IPR006059 YP_002936074.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K10201 putative permease protein; HMMPfam:IPR000515 YP_002936075.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K10202 permease protein; HMMPfam:IPR000515; ScanRegExp:IPR006032 YP_002936076.1 CytoplasmicMembrane, score:9.75 YP_002936077.1 Cytoplasmic, score:8.87; NOG06132 non supervised orthologous group; KEGG:K09162 hypothetical protein; HMMTigr:IPR012711 YP_002936078.1 Cytoplasmic, score:8.87; NOG04719 non supervised orthologous group; superfamily:IPR011009 YP_002936079.1 Unknown cell location; COG1827 Predicted small molecule binding protein (contains 3H domain); HMMPfam:IPR004173; Gene3D:IPR004173 YP_002936080.1 Unknown cell location YP_002936081.1 Unknown cell location YP_002936082.1 CytoplasmicMembrane, score:7.63; KOG0946 ER-Golgi vesicle-tethering protein p115 YP_002936083.1 Cytoplasmic, score:8.87; COG0367 Asparagine synthase (glutamine-hydrolyzing); KEGG:K01953 asparagine synthase (glutamine-hydrolyzing) HMMPfam:IPR000583; HMMPfam:IPR001962; Gene3D:IPR014729; HMMTigr:IPR006426 YP_002936084.1 CytoplasmicMembrane, score:9.49; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:0hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936085.1 CytoplasmicMembrane, score:9.99; COG0577 ABC-type antimicrobial peptide transport system, permease component; KEGG:0predicted permease; HMMPfam:IPR003838 YP_002936086.1 CytoplasmicMembrane, score:9.49; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 methyl-accepting chemotaxis protein; HMMPfam:IPR003660; HMMPfam:IPR004089; HMMSmart:IPR003660; HMMSmart:IPR004089 YP_002936087.1 Unknown cell location YP_002936088.1 Cytoplasmic, score:8.87; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; KEGG:0possible acetyltransferase HMMPfam:IPR000182 YP_002936089.1 Cytoplasmic, score:8.87 YP_002936090.1 Extracellular, score:8.82 YP_002936091.1 Cytoplasmic, score:8.87; NOG06248 non supervised orthologous group YP_002936092.1 Cytoplasmic, score:8.87; NOG28040 non supervised orthologous group YP_002936093.1 Cytoplasmic, score:8.87 YP_002936094.1 Cytoplasmic, score:8.87 YP_002936095.1 Cytoplasmic, score:8.87; COG0270 Site-specific DNA methylase; KEGG:K00558 cytosine-specific methyltransferase HMMPfam:IPR001525; HMMPanther:IPR001525; HMMTigr:IPR001525; ScanRegExp:IPR001525 YP_002936096.1 Cytoplasmic, score:8.87; NOG18295 non supervised orthologous group YP_002936097.1 Cytoplasmic, score:8.87; COG0270 Site-specific DNA methylase; KEGG:K00558 modification methylase, putative HMMPfam:IPR001525; HMMPanther:IPR001525; HMMTigr:IPR001525; ScanRegExp:IPR001525 YP_002936098.1 Cytoplasmic, score:8.87; COG3440 Predicted restriction endonuclease; HMMPfam:IPR002711; HMMSmart:IPR003615 YP_002936099.1 Cytoplasmic, score:8.87; superfamily:IPR010982 YP_002936100.1 Cytoplasmic, score:8.87; COG3727 DNA G:T-mismatch repair endonuclease; KEGG:0very short patch repair endonuclease, putative HMMPfam:IPR004603; BlastProDom:IPR004603; Gene3D:IPR004603; HMMPIR:IPR004603; superfamily:IPR011335 YP_002936101.1 Unknown cell location YP_002936102.1 Cytoplasmic, score:8.87; COG0270 Site-specific DNA methylase; KEGG:K00558 modification methylase HMMPfam:IPR001525; HMMPanther:IPR001525; HMMTigr:IPR001525; ScanRegExp:IPR001525; superfamily:IPR010985 YP_002936103.1 Cytoplasmic, score:8.87; NOG14036 non supervised orthologous group; KEGG:K01155 putative type II restriction enzyme HMMPfam:IPR015109; HMMPfam:IPR015300; superfamily:IPR011335 YP_002936104.1 Cytoplasmic, score:8.87; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 cassette chromosome recombinase B; HMMPfam:IPR006119; HMMPfam:IPR011109; Gene3D:IPR006119; superfamily:IPR006119 YP_002936105.1 CytoplasmicMembrane, score:9.99; NOG22552 non supervised orthologous group YP_002936106.1 Cytoplasmic, score:8.87; NOG34373 non supervised orthologous group YP_002936107.1 CytoplasmicMembrane, score:9.75 YP_002936108.1 Unknown cell location YP_002936109.1 Cytoplasmic, score:8.87; COG3886 Predicted HKD family nuclease; KEGG:0DNA/RNA helicase HMMPfam:IPR001650; HMMPfam:IPR006935; HMMSmart:IPR001650; ScanRegExp:IPR013838 YP_002936110.1 Cytoplasmic, score:8.87; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:K03574 mutator MutT protein HMMPfam:IPR000086; Gene3D:IPR000086; ScanRegExp:IPR003006; superfamily:IPR015797 YP_002936111.1 Unknown cell location; COG1393 Arsenate reductase and related proteins, glutaredoxin family; HMMPfam:IPR006660; Gene3D:IPR012335; superfamily:IPR012336 YP_002936112.1 Unknown cell location YP_002936113.1 Extracellular, score:8.82 YP_002936114.1 Cytoplasmic, score:8.87; COG4804 Uncharacterized conserved protein; HMMPfam:IPR009362 YP_002936115.1 Cytoplasmic, score:8.87 YP_002936116.1 Cytoplasmic, score:8.87; BlastProDom:IPR001789; superfamily:IPR011006 YP_002936117.1 Cytoplasmic, score:8.87; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:K03574 mutator MutT protein HMMPfam:IPR000086; BlastProDom:IPR002667; FPrintScan:IPR000086; FPrintScan:IPR003562; Gene3D:IPR000086; ScanRegExp:IPR000086; superfamily:IPR015797 YP_002936118.1 Cytoplasmic, score:8.87; NOG18663 non supervised orthologous group; HMMPfam:IPR009501 YP_002936119.1 Cytoplasmic, score:8.87 YP_002936120.1 Cytoplasmic, score:8.87; COG2508 Regulator of polyketide synthase expression; KEGG:K09684 transcriptional regulatory protein; superfamily:IPR009057 YP_002936121.1 Unknown cell location; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; KEGG:K02029 K02030 amino acid ABC transporter, amino acid-binding protein/permease protein, putative; HMMPfam:IPR001638; HMMSmart:IPR001638 YP_002936122.1 CytoplasmicMembrane, score:9.82; COG0765 ABC-type amino acid transport system, permease component; KEGG:K02029 K02030 ABC-type amino acid transport/signal transduction system, periplasmic component/domain; HMMPfam:IPR000515; HMMTigr:IPR010065; ScanRegExp:IPR001865 YP_002936123.1 CytoplasmicMembrane, score:9.49; COG1126 ABC-type polar amino acid transport system, ATPase component; KEGG:K02028 hypothetical protein HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936124.1 Cytoplasmic, score:8.87; NOG14451 non supervised orthologous group; KEGG:K00945 cytidylate kinase YP_002936125.1 CytoplasmicMembrane, score:9.49; COG1101 ABC-type uncharacterized transport system, ATPase component; KEGG:K05833 ABC-type uncharacterized transport system, ATPase component; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936126.1 CytoplasmicMembrane, score:10.00; COG4120 ABC-type uncharacterized transport system, permease component; KEGG:K05832 protein of unknown function DUF534; HMMPfam:IPR001851 YP_002936127.1 Unknown cell location; COG2984 ABC-type uncharacterized transport system, periplasmic component; KEGG:K01989 putative ABC transporter substrate-binding protein; HMMPfam:IPR007487 YP_002936128.1 Unknown cell location YP_002936129.1 Cytoplasmic, score:9.98; COG0162 Tyrosyl-tRNA synthetase; KEGG:K01866 tyrosyl-tRNA synthetase HMMPfam:IPR002305; FPrintScan:IPR002307; Gene3D:IPR014729; HMMPanther:IPR002307; HMMTigr:IPR002307; ScanRegExp:IPR001412 YP_002936130.1 Unknown cell location YP_002936131.1 Cytoplasmic, score:8.87; NOG13752 non supervised orthologous group YP_002936132.1 CytoplasmicMembrane, score:9.99; KOG1721 FOG: Zn-finger YP_002936133.1 CytoplasmicMembrane, score:9.99; COG0385 Predicted Na+-dependent transporter; KEGG:K03453 sodium-dependent transporter; HMMPfam:IPR002657; HMMPanther:IPR002657 YP_002936134.1 CytoplasmicMembrane, score:9.99; COG1966 Carbon starvation protein, predicted membrane protein; KEGG:K06200 carbon starvation-induced protein; HMMPfam:IPR003706 YP_002936135.1 Cytoplasmic, score:8.87; COG1307 Uncharacterized protein conserved in bacteria; KEGG:0DAK2 domain/DegV family protein; HMMPfam:IPR003797 YP_002936136.1 Cytoplasmic, score:8.87; COG0648 Endonuclease IV; KEGG:K01151 apurinic endonuclease Apn1 HMMPfam:IPR012307; Gene3D:IPR013022; HMMPanther:IPR001719; HMMSmart:IPR001719; HMMTigr:IPR001719; ScanRegExp:IPR001719 YP_002936137.1 CytoplasmicMembrane, score:7.63; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; KEGG:K06131 possible cardiolipin synthase (phospholipase D family) HMMPfam:IPR001736; HMMSmart:IPR001736 YP_002936138.1 Cytoplasmic, score:8.87; COG1254 Acylphosphatases; KEGG:K01512 putative acylphosphatase HMMPfam:IPR001792; BlastProDom:IPR001792; FPrintScan:IPR001792; HMMPanther:IPR001792; ScanRegExp:IPR001792; superfamily:IPR001792 YP_002936139.1 Cytoplasmic, score:8.87 YP_002936140.1 Unknown cell location YP_002936141.1 Cytoplasmic, score:8.87; NOG16821 non supervised orthologous group YP_002936142.1 Unknown cell location; HMMTigr:IPR006442 YP_002936143.1 Extracellular, score:8.82 YP_002936144.1 Unknown cell location YP_002936145.1 Unknown cell location YP_002936146.1 Unknown cell location; COG3279 Response regulator of the LytR/AlgR family; KEGG:K02477 response regulator of the LytR/AlgR family; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002936147.1 CytoplasmicMembrane, score:9.99; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; superfamily:IPR003594 YP_002936148.1 Unknown cell location YP_002936149.1 CytoplasmicMembrane, score:10.00 YP_002936150.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K01990 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002936151.1 CytoplasmicMembrane, score:9.99; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_002936152.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMTigr:IPR002528 YP_002936153.1 Extracellular, score:8.82 YP_002936154.1 Cytoplasmic, score:9.98; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K01649 2-isopropylmalate synthase HMMPfam:IPR000005; HMMPfam:IPR003313; FPrintScan:IPR000005; Gene3D:IPR012287; HMMSmart:IPR000005; ScanRegExp:IPR000005; superfamily:IPR009057; superfamily:IPR011051 YP_002936155.1 Cytoplasmic, score:8.87; COG2984 ABC-type uncharacterized transport system, periplasmic component; KEGG:K01989 protein of unknown function DUF534; HMMPfam:IPR007487 YP_002936156.1 CytoplasmicMembrane, score:10.00; COG4120 ABC-type uncharacterized transport system, permease component; KEGG:K05832 ABC transporter integral membrane protein; HMMPfam:IPR001851 YP_002936157.1 CytoplasmicMembrane, score:9.49; COG1101 ABC-type uncharacterized transport system, ATPase component; KEGG:K05833 putative ABC-transporter ATP-binding component; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002936158.1 Cytoplasmic, score:8.87 YP_002936159.1 Cytoplasmic, score:8.87; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936160.1 Cytoplasmic, score:8.87; COG0352 Thiamine monophosphate synthase; KEGG:K00788 thiamine-phosphate pyrophosphorylase, putative HMMPfam:IPR003733; BlastProDom:IPR003733; Gene3D:IPR013785 YP_002936161.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center YP_002936162.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_002936163.1 Unknown cell location; COG2104 Sulfur transfer protein involved in thiamine biosynthesis; HMMPfam:IPR003749; Gene3D:IPR012675; HMMTigr:IPR010035 YP_002936165.1 Cytoplasmic, score:8.87 YP_002936166.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_002936168.1 Cytoplasmic, score:8.87 YP_002936169.1 Unknown cell location YP_002936170.1 Unknown cell location YP_002936171.1 Unknown cell location; NOG17852 non supervised orthologous group YP_002936172.1 Cytoplasmic, score:8.87; COG0502 Biotin synthase and related enzymes; KEGG:K01012 biotin synthase HMMPfam:IPR007197; Gene3D:IPR013785; HMMSmart:IPR006638 YP_002936173.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain YP_002936174.1 Cytoplasmic, score:8.87; COG1160 Predicted GTPases; KEGG:K03977 GTP-binding protein EngA; HMMPfam:IPR002917; HMMTigr:IPR005225 YP_002936175.1 Cytoplasmic, score:8.87 YP_002936176.1 Cytoplasmic, score:8.87; COG1309 Transcriptional regulator; HMMPfam:IPR001647; Gene3D:IPR012287; superfamily:IPR009057 YP_002936177.1 CytoplasmicMembrane, score:9.99; COG3247 Uncharacterized conserved protein YP_002936178.1 Cytoplasmic, score:8.87; COG0535 Predicted Fe-S oxidoreductases; KEGG:K06139 coenzyme PQQ biosynthesis protein E; HMMPfam:IPR007197; HMMSmart:IPR006638 YP_002936179.1 Cytoplasmic, score:8.87; COG0084 Mg-dependent DNase; KEGG:K03424 putative deoxyribonuclease HMMPfam:IPR001130; HMMPIR:IPR012278; HMMPanther:IPR015992; HMMTigr:IPR015991; ScanRegExp:IPR001130 YP_002936180.1 Cytoplasmic, score:8.87; COG0030 Dimethyladenosine transferase (rRNA methylation); KEGG:K00561 dimethyladenosine transferase HMMPfam:IPR001737; HMMPanther:IPR001737; HMMSmart:IPR001737; HMMTigr:IPR011530; ScanRegExp:IPR001220; ScanRegExp:IPR001737 YP_002936181.1 Unknown cell location; COG0739 Membrane proteins related to metalloendopeptidases; HMMPfam:IPR002886; HMMPanther:IPR002886; superfamily:IPR011055 YP_002936182.1 Cytoplasmic, score:8.87; COG2199 FOG: GGDEF domain; KEGG:K02488 putative regulatory components of sensory transduction system; HMMPfam:IPR000160; HMMSmart:IPR000160; HMMTigr:IPR000160 YP_002936183.1 Cytoplasmic, score:8.87; COG2827 Predicted endonuclease containing a URI domain; KEGG:K07461 predicted O-methyltransferase; HMMPfam:IPR000305; HMMSmart:IPR000305 YP_002936184.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K10117 hypothetical ABC transporter extracellular binding protein; HMMPfam:IPR006059 YP_002936185.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K02025 permease of ABC transporter possibly for oligosaccharides; HMMPfam:IPR000515 YP_002936186.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K02026 permease of ABC transporter possibly for oligosaccharides; HMMPfam:IPR000515 YP_002936187.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K02529 catabolite control protein A; HMMPfam:IPR000843; HMMPfam:IPR001761; HMMSmart:IPR000843; superfamily:IPR010982 YP_002936188.1 CytoplasmicMembrane, score:9.99; COG0628 Predicted permease; KEGG:K03548 protein of unknown function UPF0118; HMMPfam:IPR002549; HMMPanther:IPR002549 YP_002936189.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528 YP_002936190.1 CytoplasmicMembrane, score:9.99; COG3210 Large exoproteins involved in heme utilization or adhesion YP_002936191.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K03484 hypothetical protein; HMMSmart:IPR000843; superfamily:IPR010982 YP_002936192.1 CytoplasmicMembrane, score:10.00; COG4209 ABC-type polysaccharide transport system, permease component; KEGG:K02025 ABC transporter, permease protein; HMMPfam:IPR000515; ScanRegExp:IPR000005 YP_002936193.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K02026 ABC transporter, permease protein; HMMPfam:IPR000515 YP_002936194.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K02027 ABC transporter, substrate-binding protein YP_002936195.1 Cytoplasmic, score:9.98; COG1621 Beta-fructosidases (levanase/invertase); KEGG:K01193 sucrose-6-phosphate hydrolase HMMPfam:IPR013148; HMMPfam:IPR013189; HMMSmart:IPR001362; HMMTigr:IPR006232; ScanRegExp:IPR000875; superfamily:IPR008985 YP_002936196.1 Cytoplasmic, score:9.98; COG0524 Sugar kinases, ribokinase family; KEGG:K00847 pfkB-type carbohydrate kinase family protein HMMPfam:IPR011611 YP_002936197.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002936198.1 CytoplasmicMembrane, score:9.97; COG0659 Sulfate permease and related transporters (MFS superfamily); KEGG:K03321 hypothetical protein; HMMPfam:IPR002645; HMMPfam:IPR011547; Gene3D:IPR002645; superfamily:IPR002645 YP_002936199.1 Cytoplasmic, score:8.87; COG0514 Superfamily II DNA helicase; KEGG:K03654 hypothetical protein HMMPfam:IPR001650; HMMPfam:IPR002121; HMMPfam:IPR011545; HMMPanther:IPR004589; HMMSmart:IPR001650; HMMSmart:IPR002121; HMMSmart:IPR014001; HMMTigr:IPR004589; superfamily:IPR010997 YP_002936200.1 CytoplasmicMembrane, score:9.99; COG4720 Predicted membrane protein YP_002936201.1 Cytoplasmic, score:8.87; COG0135 Phosphoribosylanthranilate isomerase; KEGG:K01817 phosphoribosylanthranilate isomerase HMMPfam:IPR001240; Gene3D:IPR013785; superfamily:IPR011060 YP_002936202.1 Unknown cell location; COG1363 Cellulase M and related proteins; KEGG:0conserved uncharacterized protein HMMPfam:IPR008007; HMMPIR:IPR008007 YP_002936203.1 Cytoplasmic, score:8.87; COG0346 Lactoylglutathione lyase and related lyases; KEGG:K08234 glyoxalase I (glyoxalase family); HMMPfam:IPR004360 YP_002936204.1 Cytoplasmic, score:8.87; COG2826 Transposase and inactivated derivatives, IS30 family; superfamily:IPR012337 YP_002936205.1 Unknown cell location YP_002936206.1 Unknown cell location; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; KEGG:K01179 K01183 chitinase HMMPfam:IPR001919; HMMPfam:IPR002035; Gene3D:IPR012291; HMMSmart:IPR001919; HMMSmart:IPR002035; ScanRegExp:IPR002048; superfamily:IPR008965 YP_002936207.1 Cytoplasmic, score:8.87 YP_002936208.1 Unknown cell location YP_002936209.1 Unknown cell location YP_002936210.1 Unknown cell location YP_002936211.1 Cytoplasmic, score:8.87; COG3943 Virulence protein YP_002936212.1 Cytoplasmic, score:8.87; COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif; KEGG:0hypothetical protein; HMMPfam:IPR005175 YP_002936213.1 Cytoplasmic, score:8.87; NOG06778 non supervised orthologous group YP_002936214.1 Unknown cell location; COG3738 Uncharacterized protein conserved in bacteria; KEGG:K09974 hypothetical protein; HMMPfam:IPR009706 YP_002936215.1 Unknown cell location YP_002936216.1 Cytoplasmic, score:8.87 YP_002936217.1 Cytoplasmic, score:8.87; COG1373 Predicted ATPase (AAA+ superfamily); KEGG:0hypothetical protein; superfamily:IPR011335 YP_002936218.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K03604 transcriptional regulator; HMMPfam:IPR001761; HMMSmart:IPR000843; superfamily:IPR010982 YP_002936219.1 Unknown cell location YP_002936220.1 Cytoplasmic, score:8.87; COG1621 Beta-fructosidases (levanase/invertase); KEGG:K01193 putative beta-fructofuranosidase protein HMMPfam:IPR013148; HMMSmart:IPR001362; superfamily:IPR008985 YP_002936221.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K10117 sugar ABC transporter (sugar-binding protein); HMMPfam:IPR006059 YP_002936222.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K02025 putative ABC-type sugar transport systems, permease components; HMMPfam:IPR000515 YP_002936223.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K10119 sugar ABC transporter (permease); HMMPfam:IPR000515; BlastProDom:IPR004679 YP_002936224.1 Cytoplasmic, score:8.87; NOG11699 non supervised orthologous group YP_002936225.1 Extracellular, score:8.82 YP_002936226.1 Unknown cell location YP_002936227.1 Cytoplasmic, score:8.87; COG1592 Rubrerythrin; HMMPfam:IPR003251; HMMPfam:IPR004039; BlastProDom:IPR004039; Gene3D:IPR004039; Gene3D:IPR012347; superfamily:IPR009078 YP_002936228.1 Cytoplasmic, score:8.87; COG0735 Fe2+/Zn2+ uptake regulation proteins; KEGG:K09825 ferric uptake regulator, Fur family; HMMPfam:IPR002481; BlastProDom:IPR002481 YP_002936229.1 Cytoplasmic, score:8.87 YP_002936230.1 Cytoplasmic, score:8.87; COG2820 Uridine phosphorylase; KEGG:K00757 uridine phosphorylase HMMPfam:IPR000845; HMMPanther:IPR000845; HMMTigr:IPR010058; ScanRegExp:IPR000845 YP_002936231.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate YP_002936232.1 Cytoplasmic, score:8.87; COG0295 Cytidine deaminase; KEGG:K01489 cytidine deaminase HMMPfam:IPR002125; HMMPanther:IPR006262; HMMTigr:IPR006262 YP_002936233.1 Cytoplasmic, score:8.87; COG1816 Adenosine deaminase; KEGG:K01488 adenosine deaminase HMMPfam:IPR001365; HMMPanther:IPR001365; HMMTigr:IPR006330 YP_002936234.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose YP_002936235.1 Cytoplasmic, score:8.87; COG0005 Purine nucleoside phosphorylase; KEGG:K03783 purine nucleoside phosphorylase HMMPfam:IPR001369; HMMPanther:IPR001369; HMMPanther:IPR011268; HMMTigr:IPR011268; HMMTigr:IPR011270 YP_002936236.1 Cytoplasmic, score:8.87 YP_002936237.1 Cytoplasmic, score:8.87 YP_002936238.1 Unknown cell location; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; KEGG:K03790 ribosomal-protein-alanine acetyltransferase, putative HMMPfam:IPR000182 YP_002936239.1 Extracellular, score:8.82 YP_002936240.1 Cytoplasmic, score:8.87; COG0590 Cytosine/adenosine deaminases; KEGG:0cytidine and deoxycytidylate deaminase family protein HMMPfam:IPR002125; ScanRegExp:IPR002125 YP_002936241.1 Unknown cell location; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; KEGG:K03088 putative RNA polymerase sigma factor (ECF subfamily); HMMPfam:IPR007627; HMMPfam:IPR013249; HMMTigr:IPR014284; superfamily:IPR013324; superfamily:IPR013325 YP_002936242.1 Cytoplasmic, score:8.87 YP_002936243.1 Cytoplasmic, score:8.87; COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding; KEGG:K03659 pyrophosphatase (putative) HMMPfam:IPR000086; HMMPfam:IPR015375; HMMPfam:IPR015376; FPrintScan:IPR000086; Gene3D:IPR000086; ScanRegExp:IPR000086; superfamily:IPR015797 YP_002936244.1 Cytoplasmic, score:8.87; COG1959 Predicted transcriptional regulator; HMMPfam:IPR000944; BlastProDom:IPR000944; HMMTigr:IPR000944; ScanRegExp:IPR000944 YP_002936245.1 Cytoplasmic, score:8.87; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; KEGG:K04487 cysteine desulfurase NifS HMMPfam:IPR000192; Gene3D:IPR015421; ScanRegExp:IPR000192; ScanRegExp:IPR006025; superfamily:IPR015424 YP_002936246.1 Cytoplasmic, score:8.87; COG0822 NifU homolog involved in Fe-S cluster formation; KEGG:K04488 NifU protein; HMMPfam:IPR002871; HMMPanther:IPR002871 YP_002936247.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002936248.1 Cytoplasmic, score:8.87; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936249.1 Cytoplasmic, score:8.87; COG2361 Uncharacterized conserved protein; HMMPfam:IPR008201 YP_002936250.1 Cytoplasmic, score:8.87; HMMPfam:IPR001387; HMMPfam:IPR002934; superfamily:IPR010982 YP_002936251.1 Extracellular, score:8.82 YP_002936252.1 CytoplasmicMembrane, score:9.75; COG1672 Predicted ATPase (AAA+ superfamily); KEGG:0hypothetical protein; HMMPfam:IPR011579 YP_002936253.1 Cytoplasmic, score:8.87; HMMPfam:IPR003756 YP_002936254.1 Unknown cell location; COG4115 Uncharacterized protein conserved in bacteria; KEGG:0hypothetical protein HMMPfam:IPR009614; HMMTigr:IPR009614 YP_002936255.1 Cytoplasmic, score:8.87; COG0031 Cysteine synthase; KEGG:K01738 cysteine synthase K/M/A HMMPfam:IPR001926; HMMTigr:IPR005856; HMMTigr:IPR005859; ScanRegExp:IPR001216 YP_002936256.1 Cytoplasmic, score:8.87; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936257.1 Cytoplasmic, score:8.87; COG3550 Uncharacterized protein related to capsule biosynthesis enzymes; KEGG:0HipA protein; HMMPfam:IPR012893 YP_002936258.1 Cytoplasmic, score:8.87; COG0535 Predicted Fe-S oxidoreductases; KEGG:K03424 Mg-dependent DNase HMMPfam:IPR007197 YP_002936259.1 CytoplasmicMembrane, score:9.99; COG4720 Predicted membrane protein YP_002936260.1 Unknown cell location; COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; KEGG:K00868 putative pyridoxine kinase HMMPfam:IPR013749 YP_002936261.1 Unknown cell location YP_002936262.1 Unknown cell location YP_002936263.1 CytoplasmicMembrane, score:9.99; NOG22617 non supervised orthologous group YP_002936264.1 Cytoplasmic, score:8.87; COG0205 6-phosphofructokinase; KEGG:K00850 6-phosphofructokinase HMMPfam:IPR000023; BlastProDom:IPR015913; HMMPIR:IPR012003; HMMPanther:IPR000023; ScanRegExp:IPR015912 YP_002936265.1 Cytoplasmic, score:8.87; COG2812 DNA polymerase III, gamma/tau subunits; KEGG:K00961 DNA polymerase III, subunits gamma and tau HMMPfam:IPR003959; HMMSmart:IPR003593; HMMTigr:IPR012763; superfamily:IPR008921 YP_002936266.1 Unknown cell location; COG0718 Uncharacterized protein conserved in bacteria; KEGG:K09747 uncharacterized conserved protein, YbaB family; HMMPfam:IPR004401; Gene3D:IPR004401; HMMTigr:IPR004401 YP_002936267.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002936268.1 Cytoplasmic, score:8.87; COG3959 Transketolase, N-terminal subunit; KEGG:K00615 transketolase domain protein HMMPfam:IPR005474; ScanRegExp:IPR005474 YP_002936269.1 Cytoplasmic, score:8.87; COG3958 Transketolase, C-terminal subunit; KEGG:K00615 transketolase, C-terminal subunit HMMPfam:IPR005475; HMMPfam:IPR005476; Gene3D:IPR015941; superfamily:IPR009014 YP_002936270.1 Extracellular, score:8.82 YP_002936271.1 Unknown cell location YP_002936272.1 Unknown cell location; COG3210 Large exoproteins involved in heme utilization or adhesion YP_002936273.1 CytoplasmicMembrane, score:9.75 YP_002936274.1 CytoplasmicMembrane, score:9.99; COG1286 Uncharacterized membrane protein, required for colicin V production; HMMPfam:IPR003825 YP_002936275.1 Unknown cell location YP_002936276.1 Cytoplasmic, score:8.87; COG2017 Galactose mutarotase and related enzymes; KEGG:K01785 aldose 1-epimerase HMMPfam:IPR008183; Gene3D:IPR014718; HMMPanther:IPR015443; ScanRegExp:IPR008183; superfamily:IPR011013 YP_002936278.1 Cytoplasmic, score:9.98; COG1052 Lactate dehydrogenase and related dehydrogenases; KEGG:K05884 2-hydroxyacid dehydrogenase HMMPfam:IPR006139; HMMPfam:IPR006140; ScanRegExp:IPR006140 YP_002936279.1 CytoplasmicMembrane, score:9.99; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; KEGG:0sulfatase HMMPfam:IPR000917; Gene3D:IPR001952 YP_002936280.1 Cytoplasmic, score:8.87; COG0546 Predicted phosphatases; KEGG:K01091 predicted phosphatase HMMPfam:IPR001667; HMMPfam:IPR003156; HMMPfam:IPR005834; HMMTigr:IPR006402; HMMTigr:IPR006439 YP_002936281.1 CytoplasmicMembrane, score:9.76; COG3711 Transcriptional antiterminator; KEGG:K02538 PRD/PTS system IIA 2 domain protein; HMMPfam:IPR002178; BlastProDom:IPR002178; Gene3D:IPR002178; ScanRegExp:IPR002178; ScanRegExp:IPR005829 YP_002936282.1 Cytoplasmic, score:9.98; COG1925 Phosphotransferase system, HPr-related proteins; HMMPfam:IPR000032; BlastProDom:IPR000032; Gene3D:IPR000032; HMMTigr:IPR005698; superfamily:IPR000032 YP_002936283.1 Cytoplasmic, score:9.98; COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); KEGG:0phosphoenolpyruvate-protein phosphotransferase HMMPfam:IPR000121; HMMPfam:IPR008279; HMMPfam:IPR008731; BlastProDom:IPR000121; Gene3D:IPR008279; Gene3D:IPR008731; Gene3D:IPR015813; HMMTigr:IPR006318; ScanRegExp:IPR008279; superfamily:IPR008279; superfamily:IPR008731 YP_002936284.1 Cytoplasmic, score:8.87; COG1672 Predicted ATPase (AAA+ superfamily); KEGG:0ATPase; HMMPfam:IPR004256; HMMPfam:IPR011579; ScanRegExp:IPR000223 YP_002936285.1 Unknown cell location YP_002936286.1 Unknown cell location YP_002936287.1 Unknown cell location YP_002936288.1 CytoplasmicMembrane, score:9.39; COG0577 ABC-type antimicrobial peptide transport system, permease component; HMMPfam:IPR003838 YP_002936289.1 CytoplasmicMembrane, score:9.49; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:0ABC transporter ATP-binding protein - Pep export; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936290.1 CytoplasmicMembrane, score:9.99; COG0577 ABC-type antimicrobial peptide transport system, permease component; KEGG:0transmembrane protein Vexp3; HMMPfam:IPR003838 YP_002936291.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002936292.1 Cytoplasmic, score:8.87; COG0642 Signal transduction histidine kinase; KEGG:K02484 hypothetical protein HMMPfam:IPR003594; HMMPfam:IPR003661; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002936293.1 Cytoplasmic, score:8.87 YP_002936294.1 Extracellular, score:9.55; COG1345 Flagellar capping protein YP_002936295.1 Extracellular, score:8.82 YP_002936296.1 Extracellular, score:8.82; COG0267 Ribosomal protein L33; HMMPfam:IPR001705; BlastProDom:IPR001705; HMMTigr:IPR001705 YP_002936297.1 Unknown cell location; HMMPfam:IPR001901; HMMTigr:IPR005807 YP_002936298.1 Unknown cell location; COG0250 Transcription antiterminator; KEGG:K02601 transcription antitermination protein NusG; HMMPfam:IPR006645; BlastProDom:IPR003257; HMMSmart:IPR006645; HMMTigr:IPR001062; ScanRegExp:IPR015869; superfamily:IPR008991 YP_002936299.1 Unknown cell location; COG0080 Ribosomal protein L11; KEGG:K02867 ribosomal protein L11; HMMPfam:IPR000911; BlastProDom:IPR000911; Gene3D:IPR000911; HMMPanther:IPR000911; HMMPanther:IPR006519; HMMSmart:IPR000911; HMMTigr:IPR006519; superfamily:IPR000911 YP_002936300.1 Unknown cell location; COG0081 Ribosomal protein L1; KEGG:K02863 50S ribosomal protein L1; HMMPfam:IPR002143; BlastProDom:IPR002143; HMMPanther:IPR005878; HMMTigr:IPR005878; ScanRegExp:IPR002143 YP_002936301.1 Cytoplasmic, score:8.87; COG0244 Ribosomal protein L10; KEGG:K02864 50S ribosomal protein L10; HMMPfam:IPR001790; ScanRegExp:IPR002363 YP_002936302.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_002936303.1 Cytoplasmic, score:9.98; COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; KEGG:K03043 DNA-directed RNA polymerase subunit beta HMMPfam:IPR007120; HMMPfam:IPR007641; HMMPfam:IPR007642; HMMPfam:IPR007644; HMMPfam:IPR007645; HMMPanther:IPR015712; HMMTigr:IPR010243; ScanRegExp:IPR007121; superfamily:IPR011055 YP_002936304.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_002936305.1 Unknown cell location; COG0048 Ribosomal protein S12; KEGG:K02950 30S ribosomal protein S12; HMMPfam:IPR006032; Gene3D:IPR012340; HMMPanther:IPR005679; HMMPanther:IPR006032; HMMTigr:IPR005679; ScanRegExp:IPR006032 YP_002936306.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002936307.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002936308.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002936309.1 Extracellular, score:8.82 YP_002936310.1 Unknown cell location; NOG11920 non supervised orthologous group YP_002936311.1 Unknown cell location; COG2337 Growth inhibitor; KEGG:0putative DNA-binding protein, PemK family; HMMPfam:IPR003477; Gene3D:IPR011067; superfamily:IPR011067 YP_002936312.1 Cytoplasmic, score:8.87; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936313.1 Unknown cell location YP_002936314.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K03733 phage integrase family protein; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002936315.1 Cytoplasmic, score:8.87; NOG19743 non supervised orthologous group; HMMSmart:IPR003593 YP_002936316.1 Unknown cell location YP_002936317.1 Cytoplasmic, score:8.87; KOG4725 Uncharacterized conserved protein; HMMPfam:IPR001668 YP_002936318.1 Cytoplasmic, score:8.87 YP_002936319.1 catalyzes the formation of inosine from adenosine YP_002936320.1 Extracellular, score:8.82 YP_002936321.1 Unknown cell location YP_002936322.1 Unknown cell location YP_002936323.1 Cytoplasmic, score:8.87; COG0535 Predicted Fe-S oxidoreductases; KEGG:K06139 pyrroloquinoline quinone biosynthesis protein PqqE; HMMPfam:IPR007197; HMMSmart:IPR006638 YP_002936324.1 CytoplasmicMembrane, score:9.99; COG0477 Permeases of the major facilitator superfamily; HMMPfam:IPR011701 YP_002936325.1 Cytoplasmic, score:8.87; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; KEGG:K00676 ribosomal-protein-alanine acetyltransferase HMMPfam:IPR000182 YP_002936326.1 Unknown cell location; NOG23334 non supervised orthologous group YP_002936327.1 Unknown cell location; NOG39284 non supervised orthologous group; HMMPfam:IPR013097; superfamily:IPR011008 YP_002936328.1 CytoplasmicMembrane, score:9.49; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 methyl-accepting chemotaxis protein (MCP); HMMPfam:IPR003660; HMMPfam:IPR004089; HMMSmart:IPR003660; HMMSmart:IPR004089 YP_002936329.1 Unknown cell location YP_002936330.1 Cytoplasmic, score:8.87 YP_002936331.1 Cytoplasmic, score:8.87; COG4913 Uncharacterized protein conserved in bacteria YP_002936332.1 Cytoplasmic, score:8.87; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; KEGG:0putative acetyltransferase protein superfamily:IPR011004 YP_002936333.1 CytoplasmicMembrane, score:9.99; COG2270 Permeases of the major facilitator superfamily; KEGG:K06902 hypothetical protein; HMMPfam:IPR011701 YP_002936334.1 Cytoplasmic, score:9.98; COG0584 Glycerophosphoryl diester phosphodiesterase; KEGG:K01126 glycerophosphoryl diester phosphodiesterase HMMPfam:IPR004129; HMMPanther:IPR004129 YP_002936335.1 Unknown cell location YP_002936336.1 Cytoplasmic, score:8.87 YP_002936337.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_002936338.1 Cytoplasmic, score:8.87; COG2606 Uncharacterized conserved protein; KEGG:K03976 YbaK/EbsC protein; HMMPfam:IPR007214; HMMTigr:IPR004369 YP_002936339.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002936340.1 Cytoplasmic, score:8.87; COG0598 Mg2+ and Co2+ transporters; KEGG:K03284 Mg2+ and Co2+ transporter; HMMPfam:IPR002523; HMMPanther:IPR002523 YP_002936341.1 Unknown cell location; COG1092 Predicted SAM-dependent methyltransferases; KEGG:K06969 hypothetical protein YP_002936342.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_002936343.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002936344.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_002936345.1 Unknown cell location; COG0089 Ribosomal protein L23; KEGG:K02892 50S ribosomal protein L23; HMMPfam:IPR013025; BlastProDom:IPR013025; Gene3D:IPR012677; superfamily:IPR012678 YP_002936346.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002936347.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002936348.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002936349.1 Cytoplasmic, score:8.87; COG0092 Ribosomal protein S3; KEGG:K02982 SSU ribosomal protein S3P; HMMPfam:IPR001351; HMMPfam:IPR004044; HMMPfam:IPR008282; Gene3D:IPR001351; Gene3D:IPR015946; HMMSmart:IPR004087; HMMTigr:IPR005704; ScanRegExp:IPR001351; superfamily:IPR001351; superfamily:IPR009019 YP_002936350.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002936351.1 one of the stabilizing components for the large ribosomal subunit YP_002936352.1 Cytoplasmic, score:8.87; COG0186 Ribosomal protein S17; KEGG:K02961 ribosomal protein S17; HMMPfam:IPR000266; BlastProDom:IPR000266; Gene3D:IPR012340; HMMPanther:IPR000266; ScanRegExp:IPR000266 YP_002936353.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_002936354.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002936355.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_002936356.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_002936357.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002936358.1 binds 5S rRNA along with protein L5 and L25 YP_002936359.1 Unknown cell location; COG0098 Ribosomal protein S5; KEGG:K02988 ribosomal protein S5; HMMPfam:IPR005324; HMMPfam:IPR013810; Gene3D:IPR014720; Gene3D:IPR014721; HMMPanther:IPR000851; HMMTigr:IPR005712; ScanRegExp:IPR013810 YP_002936360.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_002936361.1 late assembly protein YP_002936362.1 CytoplasmicMembrane, score:10.00; COG0201 Preprotein translocase subunit SecY; KEGG:K03076 preprotein translocase subunit SecY; HMMPfam:IPR002208; HMMPIR:IPR002208; HMMPanther:IPR002208; HMMTigr:IPR002208; ScanRegExp:IPR002208; superfamily:IPR002208 YP_002936363.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_002936364.1 Cytoplasmic, score:8.87; COG0024 Methionine aminopeptidase; KEGG:K01265 methionine aminopeptidase HMMPfam:IPR000994; Gene3D:IPR000994; HMMPanther:IPR000994; HMMPanther:IPR002467; HMMTigr:IPR002467 YP_002936365.1 Cytoplasmic, score:9.98; COG0361 Translation initiation factor 1 (IF-1); KEGG:K02518 translation initiation factor IF-1; HMMPfam:IPR006196; Gene3D:IPR012340; HMMSmart:IPR003029; HMMTigr:IPR004368 YP_002936366.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_002936367.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002936368.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_002936369.1 Cytoplasmic, score:8.87; COG0522 Ribosomal protein S4 and related proteins; KEGG:K02986 30S ribosomal protein S4; HMMPfam:IPR001912; HMMPfam:IPR002942; HMMPanther:IPR001912; HMMSmart:IPR002942; HMMTigr:IPR005709; ScanRegExp:IPR001912 YP_002936370.1 Cytoplasmic, score:9.98; COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; KEGG:K03040 DNA-directed RNA polymerase, alpha subunit HMMPfam:IPR011260; HMMPfam:IPR011261; HMMPfam:IPR011262; BlastProDom:IPR011260; Gene3D:IPR011262; HMMSmart:IPR011263; HMMTigr:IPR011773; superfamily:IPR009025; superfamily:IPR011262 YP_002936371.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002936372.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate YP_002936373.1 acts to load the DnaB helicase onto the initiation site during DNA replication YP_002936374.1 Unknown cell location; COG3935 Putative primosome component and related proteins; HMMPfam:IPR006343; HMMTigr:IPR006343 YP_002936375.1 Cytoplasmic, score:9.98; COG0773 UDP-N-acetylmuramate-alanine ligase; KEGG:K01924 UDP-N-acetylmuramate--L-alanine ligase HMMPfam:IPR000713; HMMPfam:IPR004101; HMMPfam:IPR013221; HMMTigr:IPR005758 YP_002936376.1 Cytoplasmic, score:8.87; COG0448 ADP-glucose pyrophosphorylase; KEGG:K00975 glucose-1-phosphate adenylyltransferase HMMPfam:IPR001451; HMMPfam:IPR005835; HMMTigr:IPR011831; ScanRegExp:IPR005836; superfamily:IPR011004 YP_002936377.1 Cytoplasmic, score:8.87; COG0448 ADP-glucose pyrophosphorylase; KEGG:K00975 glucose-1-phosphate adenylyltransferase, GlgD subunit HMMPfam:IPR005835; ScanRegExp:IPR005836; superfamily:IPR011004 YP_002936378.1 Cytoplasmic, score:8.87; COG2088 Uncharacterized protein, involved in the regulation of septum location; KEGG:K06412 stage V sporulation protein G; HMMPfam:IPR007170 YP_002936379.1 Cytoplasmic, score:8.87 YP_002936380.1 Cytoplasmic, score:8.87 YP_002936381.1 Cytoplasmic, score:8.87; COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; KEGG:K03660 8-oxoguanine DNA glycosylase domain protein HMMPfam:IPR012904; HMMSmart:IPR003265; superfamily:IPR011257; superfamily:IPR012294 YP_002936382.1 Cytoplasmic, score:8.87; COG0193 Peptidyl-tRNA hydrolase; KEGG:0aminoacyl-tRNA hydrolase HMMPfam:IPR001328; BlastProDom:IPR001328; Gene3D:IPR001328; HMMPanther:IPR001328; HMMTigr:IPR001328; ScanRegExp:IPR001328; superfamily:IPR001328 YP_002936383.1 Cytoplasmic, score:8.87; COG1197 Transcription-repair coupling factor (superfamily II helicase); KEGG:K03723 transcription-repair coupling factor; HMMPfam:IPR001650; HMMPfam:IPR003711; HMMPfam:IPR005118; HMMPfam:IPR011545; HMMSmart:IPR001650; HMMSmart:IPR014001; HMMTigr:IPR004576 YP_002936384.1 Unknown cell location; KOG1793 Uncharacterized conserved protein YP_002936385.1 Cytoplasmic, score:8.87; COG0703 Shikimate kinase; KEGG:K00891 shikimate kinase HMMPfam:IPR000623 YP_002936386.1 Cytoplasmic, score:8.87; COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; KEGG:K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase HMMPfam:IPR001986; BlastProDom:IPR001986; Gene3D:IPR001986; HMMPanther:IPR005750; HMMTigr:IPR005750; superfamily:IPR013792 YP_002936387.1 Cytoplasmic, score:8.87; COG2206 HD-GYP domain; KEGG:K07814 probable response regulator; HMMPfam:IPR006674; HMMSmart:IPR003607; HMMTigr:IPR006675 YP_002936388.1 Cytoplasmic, score:9.98; COG0192 S-adenosylmethionine synthetase; KEGG:K00789 methionine adenosyltransferase HMMPfam:IPR002133; HMMPIR:IPR002133; HMMPanther:IPR002133; HMMTigr:IPR002133; ScanRegExp:IPR002133; superfamily:IPR002133 YP_002936389.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07659 two-component system response regulator; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; Gene3D:IPR011991; HMMSmart:IPR001789; superfamily:IPR011006 YP_002936390.1 CytoplasmicMembrane, score:9.82; COG0642 Signal transduction histidine kinase; KEGG:0sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003660; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002936391.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMTigr:IPR002528 YP_002936392.1 Cytoplasmic, score:9.98; COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; KEGG:K03438 methyltransferase HMMPfam:IPR002903; HMMPanther:IPR002903; HMMTigr:IPR002903 YP_002936393.1 Unknown cell location YP_002936394.1 Cytoplasmic, score:9.98; COG1882 Pyruvate-formate lyase; KEGG:K00656 hypothetical protein HMMPfam:IPR001150; HMMPfam:IPR004184; HMMPIR:IPR005949; HMMTigr:IPR005949; ScanRegExp:IPR001150 YP_002936395.1 Unknown cell location YP_002936396.1 Cytoplasmic, score:9.98; COG1180 Pyruvate-formate lyase-activating enzyme; KEGG:K04069 pyruvate formate-lyase activating enzyme HMMPfam:IPR007197; HMMTigr:IPR012838; ScanRegExp:IPR001989 YP_002936397.1 Cytoplasmic, score:8.87; COG0564 Pseudouridylate synthases, 23S RNA-specific; KEGG:K01718 probable 23S rRNA pseudouridine synthase HMMPfam:IPR006145; BlastProDom:IPR006145 YP_002936398.1 Unknown cell location YP_002936399.1 Unknown cell location YP_002936400.1 Unknown cell location YP_002936401.1 Cytoplasmic, score:8.87; COG1725 Predicted transcriptional regulators; HMMPfam:IPR000524; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002936402.1 Unknown cell location; COG1879 ABC-type sugar transport system, periplasmic component; KEGG:K10540 galactose/glucose-binding lipoprotein YP_002936403.1 CytoplasmicMembrane, score:9.49; COG1129 ABC-type sugar transport system, ATPase component; KEGG:K10542 galactoside ABC transporter, ATP-binding protein HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936404.1 CytoplasmicMembrane, score:10.00; COG4211 ABC-type glucose/galactose transport system, permease component; KEGG:K10541 galactoside ABC transporter, permease protein, putative; HMMPfam:IPR001851 YP_002936405.1 Unknown cell location YP_002936406.1 Cytoplasmic, score:9.98; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; KEGG:K07720 two-component response regulator; HMMPfam:IPR000005; HMMPfam:IPR001789; BlastProDom:IPR001789; Gene3D:IPR012287; HMMSmart:IPR000005; HMMSmart:IPR001789; superfamily:IPR009057; superfamily:IPR011006 YP_002936407.1 Cytoplasmic, score:8.87; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; KEGG:K07718 hypothetical protein HMMPfam:IPR003594; HMMPfam:IPR010559; Gene3D:IPR003594; HMMSmart:IPR003594; superfamily:IPR003594 YP_002936408.1 Unknown cell location; COG1879 ABC-type sugar transport system, periplasmic component; HMMPfam:IPR001761 YP_002936409.1 Unknown cell location; COG1879 ABC-type sugar transport system, periplasmic component; KEGG:K10540 D-galactose-binding periplasmic protein precursor YP_002936410.1 Cytoplasmic, score:9.98; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K02099 transcriptional regulator, AraC family; HMMPfam:IPR000005; HMMPfam:IPR003313; Gene3D:IPR012287; HMMSmart:IPR000005; ScanRegExp:IPR000005; superfamily:IPR003313; superfamily:IPR009057 YP_002936411.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K10117 sugar ABC transporter substrate-binding protein; HMMPfam:IPR006059 YP_002936412.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K10118 ABC-type sugar transport system, permease component; HMMPfam:IPR000515 YP_002936413.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K10119 sugar ABC transporter permease; HMMPfam:IPR000515 YP_002936414.1 Cytoplasmic, score:8.87; COG3345 Alpha-galactosidase; KEGG:K07407 alpha-galactosidase HMMPfam:IPR000111; FPrintScan:IPR002252; Gene3D:IPR013785; ScanRegExp:IPR000111 YP_002936415.1 Cytoplasmic, score:8.87; COG0366 Glycosidases; KEGG:K00690 glycosidase Gene3D:IPR013781; HMMSmart:IPR006589 YP_002936416.1 Unknown cell location YP_002936417.1 Cytoplasmic, score:8.87 YP_002936418.1 Unknown cell location; COG3663 G:T/U mismatch-specific DNA glycosylase; KEGG:K01249 G:T/U mismatch-specific DNA glycosylase YP_002936419.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMTigr:IPR002528 YP_002936420.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K01775 transcriptional regulator, LacI family HMMPfam:IPR000843; HMMPfam:IPR001761; FPrintScan:IPR000843; HMMSmart:IPR000843; ScanRegExp:IPR000843; superfamily:IPR010982 YP_002936421.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K02027 secreted sugar binding protein; HMMPfam:IPR006059 YP_002936422.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K02025 ABC-type sugar transport systems, permease components; HMMPfam:IPR000515 YP_002936423.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K02026 similar to sugar ABC transporter, permease protein; HMMPfam:IPR000515 YP_002936424.1 Cytoplasmic, score:8.87; COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; KEGG:0alpha-xylosidase HMMPfam:IPR000322; HMMPanther:IPR000322 YP_002936425.1 Cytoplasmic, score:8.87; COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; KEGG:K01187 alpha-glucosidase HMMPfam:IPR000322; HMMPanther:IPR000322; ScanRegExp:IPR000322 YP_002936426.1 Cytoplasmic, score:9.98; COG0708 Exonuclease III; KEGG:K01142 exodeoxyribonuclease HMMPfam:IPR005135; HMMPanther:IPR004808; HMMTigr:IPR000097; HMMTigr:IPR004808; ScanRegExp:IPR000097 YP_002936427.1 Cytoplasmic, score:8.87; COG1373 Predicted ATPase (AAA+ superfamily); KEGG:0hypothetical protein YP_002936428.1 Extracellular, score:8.82 YP_002936429.1 CytoplasmicMembrane, score:10.00; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528; ScanRegExp:IPR005829; superfamily:IPR000484 YP_002936430.1 Unknown cell location YP_002936431.1 Cytoplasmic, score:8.87; COG1846 Transcriptional regulators; HMMPfam:IPR000835; FPrintScan:IPR000835; Gene3D:IPR011991; HMMSmart:IPR000835; ScanRegExp:IPR000835 YP_002936432.1 CytoplasmicMembrane, score:9.99; COG0730 Predicted permeases; HMMPfam:IPR002781 YP_002936433.1 Cytoplasmic, score:8.87 YP_002936434.1 Cytoplasmic, score:8.87 YP_002936435.1 CytoplasmicMembrane, score:9.49; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 putative methyl-accepting chemotaxis protein (MCP); HMMPfam:IPR003660; HMMPfam:IPR004089; HMMSmart:IPR003660; HMMSmart:IPR004089 YP_002936436.1 Cytoplasmic, score:8.87; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; KEGG:K02488 hypothetical protein; HMMPfam:IPR001633; HMMSmart:IPR001633 YP_002936437.1 Extracellular, score:8.82 YP_002936438.1 Cytoplasmic, score:8.87; COG2186 Transcriptional regulators; KEGG:K05799 GntR-like; HMMPfam:IPR000524; HMMPfam:IPR011711; FPrintScan:IPR000524; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002936439.1 Cytoplasmic, score:8.87; COG2703 Hemerythrin; KEGG:K07216 hypothetical protein; HMMPfam:IPR012312; BlastProDom:IPR002063; Gene3D:IPR012827; HMMTigr:IPR012827 YP_002936440.1 Unknown cell location YP_002936441.1 Unknown cell location; COG2199 FOG: GGDEF domain; KEGG:0response regulator PleD HMMPfam:IPR000160; HMMSmart:IPR000160; HMMTigr:IPR000160 YP_002936442.1 CytoplasmicMembrane, score:9.99; COG4392 Predicted membrane protein; HMMPfam:IPR008407 YP_002936443.1 CytoplasmicMembrane, score:9.99; COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); HMMPfam:IPR011606 YP_002936444.1 Extracellular, score:8.82 YP_002936445.1 Unknown cell location YP_002936446.1 Cytoplasmic, score:8.87 YP_002936447.1 Unknown cell location; COG1929 Glycerate kinase; KEGG:K00865 hypothetical protein HMMPfam:IPR004381; Gene3D:IPR004381; HMMPanther:IPR004381; HMMTigr:IPR004381; superfamily:IPR004381 YP_002936448.1 Cytoplasmic, score:10.00; COG0442 Prolyl-tRNA synthetase; KEGG:K01881 prolyl-tRNA synthetase HMMPfam:IPR002314; HMMPfam:IPR004154; HMMPfam:IPR015263; FPrintScan:IPR002316; Gene3D:IPR004154; HMMPanther:IPR004499; HMMTigr:IPR004499; superfamily:IPR004154 YP_002936449.1 Cytoplasmic, score:8.87; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; KEGG:K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) HMMPfam:IPR002646; HMMPfam:IPR006674; HMMTigr:IPR006675 YP_002936450.1 Cytoplasmic, score:8.87; NOG09979 non supervised orthologous group; KEGG:K06331 spore coat protein CotS related; superfamily:IPR011009 YP_002936451.1 Unknown cell location; COG5295 Autotransporter adhesin; HMMPfam:IPR013229 YP_002936452.1 Unknown cell location; COG0776 Bacterial nucleoid DNA-binding protein; KEGG:K03530 DNA-binding protein HU; HMMPfam:IPR000119; BlastProDom:IPR000119; FPrintScan:IPR000119; Gene3D:IPR000119; HMMSmart:IPR000119; ScanRegExp:IPR000119; superfamily:IPR010992 YP_002936453.1 Unknown cell location; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); HMMPfam:IPR002942; HMMSmart:IPR002942 YP_002936454.1 Extracellular, score:8.82 YP_002936455.1 Cytoplasmic, score:8.87; NOG13819 non supervised orthologous group; HMMPfam:IPR012504; HMMTigr:IPR012504 YP_002936456.1 Unknown cell location; HMMPfam:IPR007060 YP_002936457.1 CytoplasmicMembrane, score:7.63; COG2208 Serine phosphatase RsbU, regulator of sigma subunit; KEGG:K01090 phosphoprotein phosphatase HMMPfam:IPR010822; HMMSmart:IPR001932; ScanRegExp:IPR002355; ScanRegExp:IPR006162 YP_002936458.1 Cytoplasmic, score:8.87; COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; KEGG:K04075 cell cycle protein MesJ, putative; HMMPfam:IPR011063; Gene3D:IPR014729; HMMPanther:IPR012094; HMMTigr:IPR012795; HMMTigr:IPR012796 YP_002936459.1 Cytoplasmic, score:9.98; COG0634 Hypoxanthine-guanine phosphoribosyltransferase; KEGG:K00760 hypoxanthine phosphoribosyltransferase HMMPfam:IPR000836; HMMTigr:IPR005904; ScanRegExp:IPR002375 YP_002936460.1 CytoplasmicMembrane, score:10.00; COG0465 ATP-dependent Zn proteases; KEGG:K07767 ATP-dependent metalloprotease FtsH HMMPfam:IPR000642; HMMPfam:IPR003959; HMMPfam:IPR011546; HMMSmart:IPR003593; HMMTigr:IPR005936; ScanRegExp:IPR003960 YP_002936461.1 Unknown cell location YP_002936462.1 Unknown cell location; ScanRegExp:IPR006025; superfamily:IPR011044 YP_002936463.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K01775 alanine racemase HMMPfam:IPR000843; HMMPfam:IPR001761; HMMSmart:IPR000843; ScanRegExp:IPR001209; superfamily:IPR010982 YP_002936464.1 Cytoplasmic, score:9.65; COG1640 4-alpha-glucanotransferase; KEGG:K00705 4-alpha-glucanotransferase HMMPfam:IPR003385; Gene3D:IPR013781 YP_002936465.1 Cytoplasmic, score:9.98; COG1640 4-alpha-glucanotransferase; KEGG:K00705 4-alpha-glucanotransferase HMMPfam:IPR003385; Gene3D:IPR013781 YP_002936466.1 Unknown cell location; COG2182 Maltose-binding periplasmic proteins/domains; KEGG:K10108 putative sugar-binding secreted protein; HMMPfam:IPR006059; ScanRegExp:IPR010916 YP_002936467.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K01622 fructose-bisphosphate aldolase HMMPfam:IPR000515 YP_002936468.1 CytoplasmicMembrane, score:10.00; COG3833 ABC-type maltose transport systems, permease component; KEGG:K10110 putative sugar ABC transport system membrane protein; HMMPfam:IPR000515 YP_002936469.1 Extracellular, score:8.82 YP_002936470.1 Unknown cell location; COG0366 Glycosidases; KEGG:K01176 alpha-amylase HMMPfam:IPR006047; Gene3D:IPR013781; HMMSmart:IPR006589 YP_002936471.1 CytoplasmicMembrane, score:7.80; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG:K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase HMMPfam:IPR002123; HMMSmart:IPR002123; HMMTigr:IPR004552 YP_002936472.1 Unknown cell location YP_002936473.1 Cytoplasmic, score:8.87; COG4466 Uncharacterized protein conserved in bacteria; HMMPfam:IPR009366 YP_002936474.1 Cytoplasmic, score:8.87; COG1388 FOG: LysM repeat; HMMPfam:IPR002482; HMMSmart:IPR002482 YP_002936475.1 Extracellular, score:7.50 YP_002936476.1 Extracellular, score:9.73; COG0791 Cell wall-associated hydrolases (invasion-associated proteins); KEGG:K01446 NLP/P60 family HMMPfam:IPR000064; superfamily:IPR009053 YP_002936477.1 Unknown cell location YP_002936478.1 Cytoplasmic, score:8.87; COG1610 Uncharacterized conserved protein; KEGG:K09117 hypothetical protein; HMMPfam:IPR003789; superfamily:IPR003789 YP_002936479.1 Cytoplasmic, score:8.87 YP_002936480.1 Cytoplasmic, score:8.87; COG0024 Methionine aminopeptidase; KEGG:K01265 methionine aminopeptidase, type I HMMPfam:IPR000994; HMMPfam:IPR004027; FPrintScan:IPR001714; Gene3D:IPR000994; HMMPanther:IPR000994; HMMPanther:IPR002467; HMMTigr:IPR002467 YP_002936481.1 Cytoplasmic, score:8.87; NOG16850 non supervised orthologous group YP_002936482.1 Extracellular, score:8.82 YP_002936483.1 Cytoplasmic, score:9.98; COG0480 Translation elongation factors (GTPases); KEGG:K02355 translation elongation factor G HMMPfam:IPR000640; HMMPfam:IPR000795; HMMPfam:IPR005517; HMMPfam:IPR010298; FPrintScan:IPR000795; Gene3D:IPR000640; Gene3D:IPR014721; HMMTigr:IPR005225; ScanRegExp:IPR000795; superfamily:IPR009000; superfamily:IPR009022 YP_002936484.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_002936485.1 Cellwall, score:9.26; NOG16062 non supervised orthologous group YP_002936486.1 Unknown cell location YP_002936487.1 Unknown cell location; COG0631 Serine/threonine protein phosphatase; KEGG:K01090 PrpC HMMPfam:IPR014045; HMMSmart:IPR001932 YP_002936488.1 CytoplasmicMembrane, score:9.49; COG0515 Serine/threonine protein kinase; KEGG:K08884 serine/threonine protein kinase fused to TPR repeats domain HMMPfam:IPR000719; BlastProDom:IPR000719; HMMSmart:IPR001245; HMMSmart:IPR002290; ScanRegExp:IPR000719; ScanRegExp:IPR008271; superfamily:IPR011009 YP_002936489.1 Cytoplasmic, score:8.87 YP_002936490.1 Unknown cell location; COG1716 FOG: FHA domain; HMMPfam:IPR000253; HMMSmart:IPR000253; superfamily:IPR008984 YP_002936491.1 Cytoplasmic, score:8.87; COG5022 Myosin heavy chain YP_002936492.1 Cytoplasmic, score:8.87 YP_002936493.1 Cytoplasmic, score:8.87; NOG35594 non supervised orthologous group YP_002936494.1 Unknown cell location YP_002936495.1 Unknown cell location; COG4842 Uncharacterized protein conserved in bacteria; HMMPfam:IPR010310 YP_002936496.1 Unknown cell location YP_002936497.1 Unknown cell location YP_002936498.1 Unknown cell location YP_002936499.1 Unknown cell location YP_002936500.1 Unknown cell location YP_002936501.1 Cytoplasmic, score:8.87 YP_002936502.1 Unknown cell location YP_002936503.1 Cytoplasmic, score:8.87 YP_002936504.1 Unknown cell location YP_002936505.1 Cytoplasmic, score:8.87 YP_002936506.1 Unknown cell location YP_002936507.1 Cytoplasmic, score:8.87; COG5444 Uncharacterized conserved protein YP_002936508.1 Unknown cell location; COG5022 Myosin heavy chain YP_002936509.1 Unknown cell location YP_002936510.1 Unknown cell location YP_002936511.1 Cytoplasmic, score:8.87 YP_002936512.1 Cytoplasmic, score:8.87 YP_002936513.1 Cytoplasmic, score:8.87 YP_002936514.1 Extracellular, score:8.82 YP_002936515.1 Unknown cell location YP_002936516.1 Cytoplasmic, score:8.87 YP_002936517.1 Cytoplasmic, score:8.87; COG5444 Uncharacterized conserved protein YP_002936518.1 Cytoplasmic, score:8.87; NOG28583 non supervised orthologous group YP_002936519.1 Cytoplasmic, score:8.87 YP_002936520.1 Unknown cell location YP_002936521.1 Cytoplasmic, score:8.87; NOG24072 non supervised orthologous group YP_002936522.1 Unknown cell location; NOG24072 non supervised orthologous group YP_002936523.1 Cytoplasmic, score:8.87; NOG24072 non supervised orthologous group YP_002936524.1 Unknown cell location; COG5444 Uncharacterized conserved protein YP_002936525.1 Cytoplasmic, score:8.87; NOG24072 non supervised orthologous group YP_002936526.1 Unknown cell location; COG4842 Uncharacterized protein conserved in bacteria; HMMPfam:IPR010310 YP_002936527.1 Cytoplasmic, score:8.87 YP_002936528.1 Cytoplasmic, score:8.87 YP_002936529.1 Unknown cell location YP_002936530.1 Extracellular, score:8.82 YP_002936531.1 Cytoplasmic, score:8.87 YP_002936532.1 Cytoplasmic, score:8.87 YP_002936533.1 Cytoplasmic, score:8.87; COG1716 FOG: FHA domain; KEGG:K03466 FtsK/SpoIIIE family protein; HMMPfam:IPR002543; superfamily:IPR008984 YP_002936534.1 Unknown cell location YP_002936535.1 Unknown cell location YP_002936536.1 Cytoplasmic, score:8.87; COG1937 Uncharacterized protein conserved in bacteria; HMMPfam:IPR003735 YP_002936537.1 Cytoplasmic, score:8.87; HMMPfam:IPR006121; ScanRegExp:IPR006121; superfamily:IPR006121 YP_002936538.1 CytoplasmicMembrane, score:9.32; COG2217 Cation transport ATPase; KEGG:K01533 heavy-metal transporting P-type ATPase HMMPfam:IPR005834; HMMPfam:IPR006121; HMMPfam:IPR008250; FPrintScan:IPR001366; FPrintScan:IPR001757; HMMPanther:IPR001757; HMMTigr:IPR001757; HMMTigr:IPR006403; HMMTigr:IPR006416; ScanRegExp:IPR001757; ScanRegExp:IPR006121; superfamily:IPR006121 YP_002936539.1 Extracellular, score:9.73; COG2730 Endoglucanase; KEGG:K01179 endo-1,4-beta-glucanase HMMPfam:IPR001547; Gene3D:IPR013781 YP_002936541.1 Cytoplasmic, score:8.87; NOG13855 non supervised orthologous group; KEGG:K06283 stage III sporulation protein D; HMMTigr:IPR014208; ScanRegExp:IPR001034; superfamily:IPR009057 YP_002936542.1 Cytoplasmic, score:8.87; NOG14451 non supervised orthologous group; KEGG:K00945 cytidylate kinase YP_002936543.1 Cytoplasmic, score:8.87; COG0518 GMP synthase - Glutamine amidotransferase domain; KEGG:K01951 bifunctional GMP synthase/glutamine amidotransferase protein HMMPfam:IPR000991; HMMPfam:IPR001674; HMMPfam:IPR011063; FPrintScan:IPR001317; FPrintScan:IPR006220; FPrintScan:IPR011702; Gene3D:IPR014729; HMMTigr:IPR001674; HMMTigr:IPR004739; ScanRegExp:IPR012998 YP_002936544.1 Unknown cell location YP_002936545.1 Cytoplasmic, score:8.87; COG2932 Predicted transcriptional regulator; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936546.1 Unknown cell location YP_002936547.1 Cytoplasmic, score:8.87; COG0582 Integrase; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR011010 YP_002936548.1 Cytoplasmic, score:8.87 YP_002936549.1 Cytoplasmic, score:8.87 YP_002936550.1 Cytoplasmic, score:8.87; HMMPfam:IPR014795; superfamily:IPR010985 YP_002936551.1 Cytoplasmic, score:8.87; COG0270 Site-specific DNA methylase; KEGG:K00558 DcmB HMMPfam:IPR001525; FPrintScan:IPR001525; HMMPanther:IPR001525; HMMTigr:IPR001525; ScanRegExp:IPR001525 YP_002936552.1 Cytoplasmic, score:8.87 YP_002936553.1 Cytoplasmic, score:8.87; NOG18716 non supervised orthologous group YP_002936554.1 Unknown cell location YP_002936555.1 Unknown cell location YP_002936556.1 Cytoplasmic, score:8.87; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:K07025 hypothetical protein; HMMPfam:IPR000086; HMMPfam:IPR005834; FPrintScan:IPR000086; Gene3D:IPR000086; HMMTigr:IPR006402; HMMTigr:IPR006439; ScanRegExp:IPR000086; superfamily:IPR015797 YP_002936557.1 Cytoplasmic, score:8.87; COG0388 Predicted amidohydrolase; KEGG:0amidohydrolase, putative HMMPfam:IPR003010; Gene3D:IPR003010; superfamily:IPR003010 YP_002936558.1 Cytoplasmic, score:8.87 YP_002936559.1 Cytoplasmic, score:8.87; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; KEGG:K00663 acetyltransferase, GNAT family HMMPfam:IPR000182 YP_002936560.1 Cytoplasmic, score:8.87 YP_002936561.1 Cytoplasmic, score:8.87 YP_002936562.1 Cytoplasmic, score:8.87; COG2826 Transposase and inactivated derivatives, IS30 family; superfamily:IPR009057 YP_002936564.1 Cytoplasmic, score:8.87; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; KEGG:0acetyltransferase, GNAT family HMMPfam:IPR000182 YP_002936565.1 Cytoplasmic, score:8.87; COG1106 Predicted ATPases; KEGG:0hypothetical protein YP_002936566.1 Cytoplasmic, score:8.87; BlastProDom:IPR003444 YP_002936567.1 CytoplasmicMembrane, score:9.75; NOG12915 non supervised orthologous group YP_002936568.1 Unknown cell location; NOG16240 non supervised orthologous group YP_002936569.1 Cytoplasmic, score:8.87; COG0655 Multimeric flavodoxin WrbA; HMMPfam:IPR005025 YP_002936570.1 Cytoplasmic, score:8.87; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; KEGG:K00663 probable aminoglycoside N6-acetyltransferase HMMPfam:IPR000182 YP_002936571.1 Cytoplasmic, score:8.87; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; HMMPfam:IPR000182 YP_002936572.1 Cytoplasmic, score:8.87; COG0406 Fructose-2,6-bisphosphatase; KEGG:K01834 phosphoglycerate mutase family protein HMMPfam:IPR013078 YP_002936573.1 Cytoplasmic, score:8.87; COG1112 Superfamily I DNA and RNA helicases and helicase subunits; KEGG:0DNA helicase YP_002936574.1 Cytoplasmic, score:8.87; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:0MutT/NUDIX family protein HMMPfam:IPR000086; BlastProDom:IPR002667; Gene3D:IPR000086; ScanRegExp:IPR000086; superfamily:IPR010982; superfamily:IPR015797 YP_002936575.1 Cytoplasmic, score:8.87; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen; KEGG:0ATP-dependent DNA helicase RecG-related protein HMMPfam:IPR007421 YP_002936576.1 Cytoplasmic, score:8.87 YP_002936577.1 Unknown cell location YP_002936578.1 CytoplasmicMembrane, score:7.80; COG4951 Uncharacterized protein conserved in bacteria; KEGG:K01156 type III restriction enzyme, res subunit HMMPfam:IPR001650; HMMPfam:IPR006935; HMMSmart:IPR014001 YP_002936579.1 Cytoplasmic, score:8.87; COG3943 Virulence protein; HMMPIR:IPR011204 YP_002936580.1 Cytoplasmic, score:8.87; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936581.1 Cytoplasmic, score:8.87 YP_002936582.1 Cytoplasmic, score:8.87 YP_002936583.1 Cytoplasmic, score:8.87; NOG11941 non supervised orthologous group YP_002936584.1 Cytoplasmic, score:8.87; COG4989 Predicted oxidoreductase; KEGG:0putative aldo-keto reductase/oxidoreductase HMMPfam:IPR001395; BlastProDom:IPR001395; FPrintScan:IPR001395; Gene3D:IPR001395; HMMPanther:IPR001395; superfamily:IPR001395 YP_002936585.1 Unknown cell location; NOG18602 non supervised orthologous group; KEGG:0flagellin lysine-N-methylase YP_002936586.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMTigr:IPR002528 YP_002936587.1 CytoplasmicMembrane, score:9.99; COG0818 Diacylglycerol kinase; KEGG:K00901 diacylglycerol kinase HMMPfam:IPR000829; BlastProDom:IPR000829; ScanRegExp:IPR000829 YP_002936588.1 Cytoplasmic, score:8.87; COG3937 Uncharacterized conserved protein YP_002936589.1 Cytoplasmic, score:8.87; COG0661 Predicted unusual protein kinase; KEGG:K03688 hypothetical protein kinase in ABC1 family; HMMPfam:IPR004147; superfamily:IPR011009 YP_002936590.1 CytoplasmicMembrane, score:9.26; COG1283 Na+/phosphate symporter; KEGG:K03324 putative Na+/Pi-cotransporter; HMMPfam:IPR003841; HMMPfam:IPR008170; BlastProDom:IPR000425; HMMTigr:IPR004633 YP_002936591.1 Cytoplasmic, score:8.87; COG1070 Sugar (pentulose and hexulose) kinases; KEGG:K00853 L-ribulokinase (putative) HMMPfam:IPR000577; HMMPanther:IPR000577 YP_002936592.1 Cytoplasmic, score:8.87; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; KEGG:K01786 L-ribulose-5-phosphate 4-epimerase HMMPfam:IPR001303; Gene3D:IPR001303; superfamily:IPR001303 YP_002936593.1 CytoplasmicMembrane, score:9.99; COG1680 Beta-lactamase class C and other penicillin binding proteins; KEGG:K01467 hypothetical beta-lactamase precursor (penicillin-binding protein) HMMPfam:IPR001466; superfamily:IPR012338 YP_002936594.1 Unknown cell location YP_002936595.1 Unknown cell location; COG0791 Cell wall-associated hydrolases (invasion-associated proteins); HMMPfam:IPR013247; HMMSmart:IPR003646 YP_002936596.1 CytoplasmicMembrane, score:9.99; COG2510 Predicted membrane protein; HMMPfam:IPR000620 YP_002936597.1 Cytoplasmic, score:8.87 YP_002936598.1 Unknown cell location; superfamily:IPR011044 YP_002936599.1 Cytoplasmic, score:9.98; COG1925 Phosphotransferase system, HPr-related proteins; KEGG:K02784 phosphotransferase system, HPr-related proteins; HMMPfam:IPR000032; BlastProDom:IPR000032; FPrintScan:IPR000032; Gene3D:IPR000032; HMMTigr:IPR005698; superfamily:IPR000032 YP_002936600.1 Unknown cell location; COG5022 Myosin heavy chain YP_002936601.1 Cytoplasmic, score:8.87; COG2070 Dioxygenases related to 2-nitropropane dioxygenase; KEGG:K00459 2-nitropropane dioxygenase HMMPfam:IPR004136; Gene3D:IPR013785 YP_002936602.1 Cytoplasmic, score:8.87; COG3408 Glycogen debranching enzyme; KEGG:K00705 4-alpha-glucanotransferase HMMPfam:IPR010401; HMMPanther:IPR010401; HMMTigr:IPR006451; ScanRegExp:IPR002160; superfamily:IPR008928 YP_002936603.1 CytoplasmicMembrane, score:7.80 YP_002936604.1 Cytoplasmic, score:8.87; NOG14256 non supervised orthologous group YP_002936605.1 Cytoplasmic, score:8.87; COG0796 Glutamate racemase; KEGG:K01776 glutamate racemase HMMPfam:IPR015942; Gene3D:IPR001920; HMMTigr:IPR004391; ScanRegExp:IPR001920; superfamily:IPR001920 YP_002936606.1 Cytoplasmic, score:8.87; COG0177 Predicted EndoIII-related endonuclease; KEGG:K01741 endonuclease III HMMPfam:IPR000445; HMMPfam:IPR003265; HMMSmart:IPR003265; ScanRegExp:IPR004036; superfamily:IPR011257 YP_002936607.1 Unknown cell location; COG1451 Predicted metal-dependent hydrolase; KEGG:0zinc metalloprotease; HMMPfam:IPR002725; ScanRegExp:IPR006025 YP_002936608.1 Cytoplasmic, score:8.87; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:0hypothetical protein HMMPfam:IPR000086; BlastProDom:IPR002667; FPrintScan:IPR000086; Gene3D:IPR000086; ScanRegExp:IPR000086; superfamily:IPR015797 YP_002936609.1 Extracellular, score:8.82 YP_002936610.1 Extracellular, score:7.50 YP_002936611.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002936612.1 CytoplasmicMembrane, score:10.00; COG0465 ATP-dependent Zn proteases; KEGG:K07767 ATP-dependent metalloprotease FtsH HMMPfam:IPR000642; HMMPfam:IPR003959; HMMPfam:IPR011546; HMMSmart:IPR003593; HMMTigr:IPR005936; ScanRegExp:IPR003960; ScanRegExp:IPR006025 YP_002936613.1 Cytoplasmic, score:8.87 YP_002936614.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_002936615.1 Cytoplasmic, score:8.87; COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism; KEGG:K06023 HPr kinase/phosphorylase HMMPfam:IPR011104; HMMPfam:IPR011126; HMMTigr:IPR003755 YP_002936616.1 catalyzes the removal of amino acids from the N termini of peptides YP_002936617.1 Unknown cell location; COG0812 UDP-N-acetylmuramate dehydrogenase; KEGG:K00075 UDP-N-acetylenolpyruvoylglucosamine reductase HMMPfam:IPR006094; HMMPfam:IPR011601; Gene3D:IPR011601; HMMPanther:IPR003170; HMMTigr:IPR003170; superfamily:IPR011601 YP_002936618.1 Cytoplasmic, score:8.87; COG1660 Predicted P-loop-containing kinase; KEGG:0hypothetical protein; HMMPfam:IPR005337; HMMPIR:IPR005337 YP_002936619.1 Cytoplasmic, score:8.87; COG1481 Uncharacterized protein conserved in bacteria; KEGG:K09762 hypothetical protein; HMMPfam:IPR003802; HMMTigr:IPR003802 YP_002936620.1 Cytoplasmic, score:8.87; COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; KEGG:0putative lipid kinase; HMMPfam:IPR001206; BlastProDom:IPR001206; HMMSmart:IPR001206; HMMTigr:IPR005218 YP_002936621.1 Cytoplasmic, score:8.87; COG0191 Fructose/tagatose bisphosphate aldolase; KEGG:K01622 fructose-1,6-bisphosphate aldolase, class II HMMPfam:IPR000771; BlastProDom:IPR000771; Gene3D:IPR013785; HMMPIR:IPR000771; HMMTigr:IPR000771; HMMTigr:IPR011289; ScanRegExp:IPR000771 YP_002936622.1 Cytoplasmic, score:9.98; COG3968 Uncharacterized protein related to glutamine synthetase; KEGG:K01915 hypothetical protein HMMPfam:IPR008146; BlastProDom:IPR008146; Gene3D:IPR014746; ScanRegExp:IPR008146 YP_002936623.1 CytoplasmicMembrane, score:10.00; COG0004 Ammonia permease; KEGG:K01769 adenylate/guanylate cyclase HMMPfam:IPR002187; HMMPfam:IPR010256; BlastProDom:IPR002187; FPrintScan:IPR002187; Gene3D:IPR015867; HMMPanther:IPR001905; HMMTigr:IPR001905; ScanRegExp:IPR001905; ScanRegExp:IPR002187; superfamily:IPR010256; superfamily:IPR011322 YP_002936624.1 Extracellular, score:9.55; COG5009 Membrane carboxypeptidase/penicillin-binding protein; KEGG:0penicillin-binding protein 1A/1B HMMPfam:IPR001264; HMMPfam:IPR001460; BlastProDom:IPR001264; superfamily:IPR012338 YP_002936625.1 Unknown cell location; COG1739 Uncharacterized conserved protein; KEGG:K00560 thymidylate synthase HMMPfam:IPR001498; HMMPfam:IPR015269; HMMPanther:IPR001498; HMMTigr:IPR015796; ScanRegExp:IPR001498; superfamily:IPR009022 YP_002936626.1 Unknown cell location YP_002936627.1 Unknown cell location; COG3884 Acyl-ACP thioesterase; KEGG:0predicted acyl-acyl carrier protein thioesterase HMMPfam:IPR002864 YP_002936628.1 Cytoplasmic, score:8.87; COG2996 Uncharacterized protein conserved in bacteria; KEGG:K00243 S1 RNA binding domain; HMMPfam:IPR003029; Gene3D:IPR012340; HMMPIR:IPR014464; HMMSmart:IPR003029 YP_002936629.1 Unknown cell location; COG0251 Putative translation initiation inhibitor, yjgF family; KEGG:K07567 hypothetical protein; HMMPfam:IPR006175; Gene3D:IPR013813; HMMPanther:IPR006175; HMMTigr:IPR006056; superfamily:IPR013813 YP_002936630.1 Extracellular, score:9.73; COG0791 Cell wall-associated hydrolases (invasion-associated proteins); KEGG:K01183 NLP/P60 family protein HMMPfam:IPR000064; HMMPfam:IPR013247; HMMSmart:IPR003646 YP_002936631.1 Cytoplasmic, score:8.87; COG1922 Teichoic acid biosynthesis proteins YP_002936632.1 Unknown cell location YP_002936633.1 Cytoplasmic, score:8.87; COG3835 Sugar diacid utilization regulator; KEGG:K02647 hypothetical protein; superfamily:IPR009057 YP_002936634.1 CytoplasmicMembrane, score:9.82; COG2884 Predicted ATPase involved in cell division; KEGG:K09812 predicted ATPase involved in cell division; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; HMMTigr:IPR005286; ScanRegExp:IPR002078; ScanRegExp:IPR003439 YP_002936635.1 CytoplasmicMembrane, score:9.99; COG2177 Cell division protein; KEGG:K09811 cell division protein; HMMPfam:IPR003838 YP_002936636.1 Unknown cell location; COG0793 Periplasmic protease; KEGG:K03797 carboxyl-terminal protease HMMPfam:IPR001478; HMMPfam:IPR005151; HMMSmart:IPR001478; HMMSmart:IPR005151; HMMTigr:IPR004447; superfamily:IPR001478 YP_002936637.1 CytoplasmicMembrane, score:9.87; COG5652 Predicted integral membrane protein; HMMPfam:IPR006976 YP_002936638.1 Extracellular, score:8.82 YP_002936639.1 Unknown cell location YP_002936640.1 Cytoplasmic, score:9.98; COG1186 Protein chain release factor B; KEGG:K02836 peptide chain release factor 2 in translation; HMMPfam:IPR000352; HMMPfam:IPR005139; HMMPanther:IPR004374; HMMTigr:IPR004374; ScanRegExp:IPR000352 YP_002936641.1 Cytoplasmic, score:8.87 YP_002936642.1 Unknown cell location; COG4260 Putative virion core protein (lumpy skin disease virus); ScanRegExp:IPR013032 YP_002936643.1 Cytoplasmic, score:8.87; COG4492 ACT domain-containing protein; KEGG:K06209 hypothetical protein HMMPfam:IPR002912; HMMPIR:IPR008310 YP_002936644.1 Cytoplasmic, score:8.87; COG0460 Homoserine dehydrogenase; KEGG:K00003 homoserine dehydrogenase HMMPfam:IPR001342; HMMPfam:IPR005106; ScanRegExp:IPR001342 YP_002936645.1 Unknown cell location; COG4786 Flagellar basal body rod protein; KEGG:K02392 flagellar basal body and hook proteins; HMMPfam:IPR001444; HMMPfam:IPR010930; ScanRegExp:IPR001444 YP_002936646.1 Unknown cell location; COG4786 Flagellar basal body rod protein; KEGG:K02392 flagellar basal body and hook proteins; HMMPfam:IPR001444; HMMPfam:IPR010930 YP_002936647.1 Unknown cell location YP_002936648.1 Cytoplasmic, score:8.87; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; KEGG:K01144 helicase, RecD/TraA family HMMSmart:IPR003593; HMMTigr:IPR006345; ScanRegExp:IPR000408; superfamily:IPR010979; superfamily:IPR010994 YP_002936649.1 Cytoplasmic, score:8.87; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; HMMPfam:IPR000182 YP_002936650.1 Unknown cell location YP_002936651.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_002936652.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_002936653.1 Cytoplasmic, score:9.98; COG0183 Acetyl-CoA acetyltransferase; KEGG:K00626 acetyl-CoA acetyltransferase HMMPfam:IPR002155; HMMPanther:IPR002155; HMMTigr:IPR002155; ScanRegExp:IPR002155 YP_002936654.1 Cytoplasmic, score:8.87; COG1250 3-hydroxyacyl-CoA dehydrogenase; KEGG:K00074 3-hydroxybutyryl-CoA dehydrogenase HMMPfam:IPR006108; HMMPfam:IPR006176; Gene3D:IPR013328; superfamily:IPR008927 YP_002936655.1 Cytoplasmic, score:8.87; COG1960 Acyl-CoA dehydrogenases; KEGG:K00248 butyryl-CoA dehydrogenase HMMPfam:IPR006090; HMMPfam:IPR006091; HMMPfam:IPR006092; Gene3D:IPR006091; Gene3D:IPR013764; Gene3D:IPR013786; ScanRegExp:IPR006089; superfamily:IPR009075; superfamily:IPR009100 YP_002936656.1 Cytoplasmic, score:8.87; COG2086 Electron transfer flavoprotein, beta subunit; KEGG:K03521 electron transfer flavoprotein beta-subunit (beta-ETF) (electrontransfer flavoprotein small subunit) (ETFSS); HMMPfam:IPR014730; BlastProDom:IPR000049; Gene3D:IPR014729; HMMPIR:IPR012255; HMMPanther:IPR012255 YP_002936657.1 Cytoplasmic, score:8.87; COG2025 Electron transfer flavoprotein, alpha subunit; KEGG:K03522 electron transfer flavoprotein alpha-subunit fixB; HMMPfam:IPR014730; HMMPfam:IPR014731; Gene3D:IPR014729; HMMPIR:IPR001308 YP_002936658.1 Unknown cell location; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936659.1 Unknown cell location YP_002936660.1 Unknown cell location YP_002936661.1 Cytoplasmic, score:8.87 YP_002936662.1 Unknown cell location YP_002936663.1 Unknown cell location YP_002936664.1 Cytoplasmic, score:8.87; NOG21390 non supervised orthologous group; HMMPfam:IPR007197 YP_002936665.1 Unknown cell location; COG0535 Predicted Fe-S oxidoreductases; HMMPfam:IPR007197 YP_002936666.1 Cytoplasmic, score:8.87 YP_002936667.1 Cytoplasmic, score:8.87; COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); KEGG:0transcriptional regulatory protein; HMMPfam:IPR007197; ScanRegExp:IPR000385 YP_002936668.1 Cytoplasmic, score:9.98; COG3579 Aminopeptidase C; KEGG:K01372 cysteine aminopeptidase C2 (bleomycin hydrolase) HMMPfam:IPR004134; HMMPIR:IPR004134; HMMPanther:IPR004134; ScanRegExp:IPR000169 YP_002936669.1 Unknown cell location YP_002936670.1 Unknown cell location YP_002936671.1 Cytoplasmic, score:8.87; NOG21390 non supervised orthologous group; HMMPfam:IPR007197 YP_002936672.1 Cytoplasmic, score:8.87 YP_002936673.1 Cytoplasmic, score:8.87; HMMPfam:IPR006674; HMMSmart:IPR003607 YP_002936674.1 Cytoplasmic, score:9.98; COG0110 Acetyltransferase (isoleucine patch superfamily); KEGG:K00633 galactoside acetyltransferase (LacA) ScanRegExp:IPR001451; superfamily:IPR011004 YP_002936675.1 Cytoplasmic, score:8.87; COG1443 Isopentenyldiphosphate isomerase; KEGG:K01597 K01823 diphosphomevalonate decarboxylase/isopentenyl-diphosphate delta-isomerase HMMPfam:IPR000086; BlastProDom:IPR002667; Gene3D:IPR000086; HMMPIR:IPR011876; HMMPanther:IPR011876; superfamily:IPR015797 YP_002936676.1 Unknown cell location YP_002936677.1 Unknown cell location; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 site-specific recombinases, DNA invertase Pin homolog; HMMPfam:IPR006119; Gene3D:IPR006119; superfamily:IPR006119 YP_002936678.1 Cytoplasmic, score:8.87 YP_002936679.1 Cytoplasmic, score:8.87 YP_002936680.1 Cytoplasmic, score:8.87; HMMPfam:IPR013249; superfamily:IPR013324 YP_002936681.1 Cytoplasmic, score:8.87; COG1408 Predicted phosphohydrolases; KEGG:0phosphoesterase HMMPfam:IPR004843 YP_002936682.1 Unknown cell location YP_002936683.1 CytoplasmicMembrane, score:9.99; COG0577 ABC-type antimicrobial peptide transport system, permease component; KEGG:0putative ABC transport system permease protein; HMMPfam:IPR003838 YP_002936684.1 CytoplasmicMembrane, score:9.82; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:0ABC transporter ATP-binding protein; HMMPfam:IPR003439; BlastProDom:IPR001482; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936685.1 CytoplasmicMembrane, score:10.00; COG0642 Signal transduction histidine kinase; KEGG:0predicted sensory transduction histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003661; FPrintScan:IPR004358; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002936686.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 two component transcriptional regulator, winged helix family; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; Gene3D:IPR011991; HMMSmart:IPR001789; superfamily:IPR011006 YP_002936687.1 Unknown cell location; COG1943 Transposase and inactivated derivatives; superfamily:IPR009061 YP_002936688.1 Cytoplasmic, score:8.87; NOG37851 non supervised orthologous group; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936689.1 Cytoplasmic, score:8.87; COG3843 Type IV secretory pathway, VirD2 components (relaxase); HMMPfam:IPR005094 YP_002936690.1 Unknown cell location YP_002936691.1 Cytoplasmic, score:8.87 YP_002936692.1 Unknown cell location YP_002936693.1 Unknown cell location YP_002936694.1 Cytoplasmic, score:8.87 YP_002936695.1 Unknown cell location YP_002936696.1 Unknown cell location; NOG36404 non supervised orthologous group YP_002936697.1 Unknown cell location YP_002936698.1 Extracellular, score:9.55; COG0791 Cell wall-associated hydrolases (invasion-associated proteins); KEGG:K01183 putative lipoprotein HMMPfam:IPR000064 YP_002936699.1 CytoplasmicMembrane, score:7.80; COG3451 Type IV secretory pathway, VirB4 components YP_002936700.1 Cytoplasmic, score:8.87 YP_002936701.1 Unknown cell location YP_002936704.1 Unknown cell location; COG2088 Uncharacterized protein, involved in the regulation of septum location; KEGG:K06412 stage V sporulation protein G; HMMPfam:IPR007170 YP_002936705.1 CytoplasmicMembrane, score:9.99; NOG28113 non supervised orthologous group YP_002936706.1 Cytoplasmic, score:8.87; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 cassette chromosome recombinase B; HMMPfam:IPR006119; HMMPfam:IPR011109; Gene3D:IPR006119; superfamily:IPR006119 YP_002936707.1 Unknown cell location YP_002936708.1 Unknown cell location YP_002936709.1 Cytoplasmic, score:8.87; COG5545 Predicted P-loop ATPase and inactivated derivatives; HMMPfam:IPR007936 YP_002936710.1 Cytoplasmic, score:8.87; COG0358 DNA primase (bacterial type); KEGG:0DNA primase HMMPfam:IPR002694; BlastProDom:IPR002694; Gene3D:IPR002694; HMMSmart:IPR002694 YP_002936711.1 Cytoplasmic, score:8.87; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; KEGG:K01144 putative conjugal transfer protein HMMPfam:IPR005053; ScanRegExp:IPR015590 YP_002936712.1 Extracellular, score:8.82 YP_002936713.1 Unknown cell location; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936714.1 Extracellular, score:8.82 YP_002936715.1 Unknown cell location YP_002936716.1 Unknown cell location; NOG34358 non supervised orthologous group YP_002936717.1 Extracellular, score:8.82 YP_002936718.1 Unknown cell location YP_002936719.1 Cytoplasmic, score:8.87 YP_002936720.1 Cytoplasmic, score:8.87; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936721.1 Unknown cell location YP_002936722.1 Cytoplasmic, score:8.87 YP_002936723.1 Unknown cell location; COG3655 Predicted transcriptional regulator; superfamily:IPR010982 YP_002936724.1 Unknown cell location YP_002936725.1 Cytoplasmic, score:8.87; COG3505 Type IV secretory pathway, VirD4 components; KEGG:K03205 ATPase involved in conjugal plasmid transfer; HMMPfam:IPR003688 YP_002936726.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 RNA-directed DNA polymerase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002936727.1 Unknown cell location; COG3505 Type IV secretory pathway, VirD4 components; KEGG:K03205 TraG protein YP_002936728.1 Unknown cell location YP_002936729.1 Cytoplasmic, score:8.87; NOG11062 non supervised orthologous group YP_002936730.1 Cytoplasmic, score:8.87; NOG09588 non supervised orthologous group YP_002936731.1 Cytoplasmic, score:8.87; COG0270 Site-specific DNA methylase; KEGG:K00558 DNA-cytosine methyltransferase HMMPfam:IPR001525; HMMPanther:IPR001525 YP_002936732.1 Cytoplasmic, score:8.87; NOG14267 non supervised orthologous group YP_002936734.1 Extracellular, score:7.62; COG1475 Predicted transcriptional regulators; KEGG:K03497 ParB-like partition proteins; HMMPfam:IPR003115; HMMSmart:IPR003115; HMMTigr:IPR004437 YP_002936735.1 Unknown cell location YP_002936736.1 Unknown cell location YP_002936737.1 Unknown cell location YP_002936738.1 Unknown cell location; COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters YP_002936739.1 Unknown cell location YP_002936740.1 Cytoplasmic, score:8.87 YP_002936741.1 Unknown cell location YP_002936742.1 Unknown cell location YP_002936743.1 Unknown cell location YP_002936744.1 Cytoplasmic, score:8.87; COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; KEGG:K00820 D-fructose-6-phosphate amidotransferase HMMPfam:IPR000583; HMMPfam:IPR001347; HMMTigr:IPR005855; ScanRegExp:IPR000583 YP_002936745.1 CytoplasmicMembrane, score:9.99; COG4684 Predicted membrane protein YP_002936746.1 Unknown cell location; COG3191 L-aminopeptidase/D-esterase; KEGG:K01266 peptidase S58, DmpA HMMPfam:IPR002641; HMMPfam:IPR005321; Gene3D:IPR005321 YP_002936747.1 Cytoplasmic, score:8.87; COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; KEGG:K01598 K01922 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, putative HMMPfam:IPR003382; HMMPfam:IPR007085; Gene3D:IPR003382; HMMTigr:IPR005252; superfamily:IPR003382 YP_002936748.1 CytoplasmicMembrane, score:9.99; COG5523 Predicted integral membrane protein; HMMPfam:IPR010380 YP_002936749.1 CytoplasmicMembrane, score:9.26; NOG15853 non supervised orthologous group YP_002936750.1 CytoplasmicMembrane, score:9.75 YP_002936751.1 Cytoplasmic, score:8.87; COG2183 Transcriptional accessory protein; KEGG:0transcription accessory protein; HMMPfam:IPR003029; Gene3D:IPR012340; HMMSmart:IPR003029; HMMSmart:IPR006641 YP_002936752.1 CytoplasmicMembrane, score:9.99; COG3601 Predicted membrane protein YP_002936753.1 Unknown cell location YP_002936754.1 Cytoplasmic, score:8.87; COG0802 Predicted ATPase or kinase; KEGG:0conserved hypothetical protein; HMMPfam:IPR003442; HMMTigr:IPR003442 YP_002936755.1 Cytoplasmic, score:8.87; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; KEGG:K01409 O-sialoglycoprotein endopeptidase HMMPfam:IPR000905 YP_002936756.1 Cytoplasmic, score:9.98; COG0456 Acetyltransferases; KEGG:K03789 ribosomal-protein-alanine acetyltransferase HMMPfam:IPR000182; HMMTigr:IPR006464 YP_002936757.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions YP_002936758.1 Unknown cell location YP_002936759.1 Extracellular, score:8.10; COG0533 Metal-dependent proteases with possible chaperone activity; KEGG:K01409 metalloendopeptidase, glycoprotease family HMMPfam:IPR000905; BlastProDom:IPR000905; FPrintScan:IPR000905; HMMPanther:IPR009180; HMMTigr:IPR000905 YP_002936760.1 Cytoplasmic, score:8.87; COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; KEGG:K00991 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family) HMMPfam:IPR001228; HMMTigr:IPR001228; ScanRegExp:IPR001228 YP_002936761.1 Extracellular, score:7.50 YP_002936762.1 Unknown cell location YP_002936763.1 Unknown cell location YP_002936764.1 Cytoplasmic, score:8.87; COG4495 Uncharacterized protein conserved in bacteria YP_002936765.1 Unknown cell location YP_002936766.1 Cytoplasmic, score:8.87 YP_002936767.1 Cytoplasmic, score:8.87; COG5585 NAD+--asparagine ADP-ribosyltransferase YP_002936768.1 Cytoplasmic, score:8.87 YP_002936769.1 Unknown cell location YP_002936770.1 Cytoplasmic, score:8.87 YP_002936771.1 Unknown cell location; COG3209 Rhs family protein YP_002936772.1 Cytoplasmic, score:8.87 YP_002936773.1 Cytoplasmic, score:8.87; NOG34170 non supervised orthologous group YP_002936774.1 Unknown cell location YP_002936775.1 Unknown cell location YP_002936776.1 Cytoplasmic, score:8.87; NOG21831 non supervised orthologous group YP_002936777.1 Unknown cell location YP_002936778.1 Cytoplasmic, score:8.87 YP_002936779.1 Cytoplasmic, score:8.87; HMMPfam:IPR004843; ScanRegExp:IPR006186 YP_002936780.1 Unknown cell location; COG2402 Predicted nucleic acid-binding protein, contains PIN domain YP_002936781.1 Unknown cell location; COG5651 PPE-repeat proteins YP_002936782.1 Cytoplasmic, score:8.87 YP_002936783.1 Cytoplasmic, score:8.87; COG3142 Uncharacterized protein involved in copper resistance; KEGG:K06201 CutC family protein; HMMPfam:IPR005627; Gene3D:IPR005627; HMMPanther:IPR005627; superfamily:IPR005627 YP_002936784.1 Cytoplasmic, score:8.87; COG0286 Type I restriction-modification system methyltransferase subunit; KEGG:K03427 type I restriction-modification system methylation subunit HMMPfam:IPR003356; FPrintScan:IPR002296; HMMTigr:IPR004546; ScanRegExp:IPR002052 YP_002936785.1 Cytoplasmic, score:8.87; COG0732 Restriction endonuclease S subunits; KEGG:K01154 type I restriction-modification system specificity subunit HMMPfam:IPR000055 YP_002936786.1 Cytoplasmic, score:8.87 YP_002936787.1 Cytoplasmic, score:8.87 YP_002936788.1 Cytoplasmic, score:8.87; COG3236 Uncharacterized protein conserved in bacteria; KEGG:K09935 hypothetical protein; HMMPfam:IPR012816; HMMTigr:IPR012816 YP_002936789.1 Unknown cell location; COG0732 Restriction endonuclease S subunits; KEGG:K01154 putative restriction and modification system specificity protein HMMPfam:IPR000055 YP_002936790.1 Cytoplasmic, score:8.87; COG0732 Restriction endonuclease S subunits; KEGG:K01152 restriction modification system DNA specificity domain HMMPfam:IPR000055 YP_002936791.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K03733 probable integrase/recombinase ripx; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR011010 YP_002936792.1 Unknown cell location; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; KEGG:K01153 type I restriction-modification system restriction subunit HMMPfam:IPR006935; HMMPfam:IPR007409; HMMSmart:IPR014001; HMMTigr:IPR004473 YP_002936793.1 Cytoplasmic, score:8.87; COG2195 Di- and tripeptidases; KEGG:K01270 aminoacyl-histidine dipeptidase HMMPfam:IPR002933; HMMPfam:IPR011650; FPrintScan:IPR001160; HMMPIR:IPR001160; HMMPanther:IPR001160; HMMTigr:IPR001160 YP_002936794.1 Cytoplasmic, score:8.87; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K07720 two-component response regulator; HMMPfam:IPR000005; HMMPfam:IPR003313; FPrintScan:IPR000005; Gene3D:IPR012287; HMMSmart:IPR000005; superfamily:IPR003313; superfamily:IPR009057 YP_002936795.1 Cytoplasmic, score:9.98; COG0366 Glycosidases; KEGG:K01182 oligo-1,6-glucosidase HMMPfam:IPR006047; Gene3D:IPR013781; HMMSmart:IPR006589 YP_002936796.1 Cytoplasmic, score:9.98; COG0366 Glycosidases; KEGG:K01215 glucan 1,6-alpha-glucosidase HMMPfam:IPR006047; Gene3D:IPR013780; Gene3D:IPR013781; HMMSmart:IPR006589 YP_002936797.1 Cytoplasmic, score:9.98; COG0492 Thioredoxin reductase; KEGG:K00384 thioredoxin reductase HMMPfam:IPR001327; HMMPfam:IPR013027; BlastProDom:IPR001327; FPrintScan:IPR000103; FPrintScan:IPR000759; FPrintScan:IPR013027; ScanRegExp:IPR008255 YP_002936798.1 Cytoplasmic, score:9.98; COG2873 O-acetylhomoserine sulfhydrylase; KEGG:K01740 O-acetylhomoserine aminocarboxypropyltransferase HMMPfam:IPR000277; Gene3D:IPR015421; Gene3D:IPR015422; HMMPanther:IPR000277; HMMPanther:IPR006235; superfamily:IPR015424 YP_002936799.1 Cytoplasmic, score:9.98; COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; KEGG:K00439 sulfite reductase, beta subunit HMMPfam:IPR001450; HMMPfam:IPR005117; HMMPfam:IPR006067; FPrintScan:IPR006066; ScanRegExp:IPR001450; ScanRegExp:IPR006066; superfamily:IPR005117 YP_002936800.1 Cytoplasmic, score:8.87; COG0425 Predicted redox protein, regulator of disulfide bond formation; KEGG:K00392 sulfite reductase (ferredoxin) HMMPfam:IPR001455; Gene3D:IPR001455 YP_002936801.1 Cytoplasmic, score:9.98; COG0526 Thiol-disulfide isomerase and thioredoxins; KEGG:K03671 thioredoxin; HMMPfam:IPR013766; Gene3D:IPR012335; HMMPanther:IPR015467; superfamily:IPR012336 YP_002936802.1 Unknown cell location; NOG36151 non supervised orthologous group; KEGG:K03154 hypothetical protein; HMMPfam:IPR003749; Gene3D:IPR012675; HMMTigr:IPR010035 YP_002936803.1 Cytoplasmic, score:8.87; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; KEGG:K03148 hypothetical protein; HMMPfam:IPR000594; HMMPfam:IPR007901; superfamily:IPR009036 YP_002936804.1 Unknown cell location; COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily; HMMSmart:IPR000555 YP_002936805.1 CytoplasmicMembrane, score:9.99; COG1268 Uncharacterized conserved protein; KEGG:K03523 uncharacterized protein of BioY family; HMMPfam:IPR003784 YP_002936806.1 Cytoplasmic, score:8.87; COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); KEGG:K02302 K02303 K02304 uroporphyrin-III C-methyltransferase HMMTigr:IPR006367 YP_002936807.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_002936808.1 Cytoplasmic, score:8.87; COG1587 Uroporphyrinogen-III synthase; KEGG:K00589 K01719 porphyrin biosynthesis protein HMMPfam:IPR000878; HMMPfam:IPR003754; Gene3D:IPR014776; Gene3D:IPR014777; HMMTigr:IPR006366; ScanRegExp:IPR003043; superfamily:IPR000878; superfamily:IPR003754 YP_002936809.1 CytoplasmicMembrane, score:9.75; NOG13752 non supervised orthologous group YP_002936810.1 Cytoplasmic, score:9.98; COG2873 O-acetylhomoserine sulfhydrylase; KEGG:K01740 putative cysteine biosynthesis related protein HMMPfam:IPR000277; Gene3D:IPR015421; Gene3D:IPR015422; HMMPanther:IPR000277; HMMPanther:IPR006235; HMMTigr:IPR006235; ScanRegExp:IPR000277; superfamily:IPR015424 YP_002936811.1 Cytoplasmic, score:8.87; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; KEGG:0sensory transduction protein kinase HMMPfam:IPR000160; HMMPfam:IPR001633; HMMSmart:IPR000160; HMMSmart:IPR001633; HMMTigr:IPR000160 YP_002936812.1 Unknown cell location; COG0607 Rhodanese-related sulfurtransferase; HMMSmart:IPR001763 YP_002936813.1 Cytoplasmic, score:8.87; COG0116 Predicted N6-adenine-specific DNA methylase; KEGG:K07444 nucleic acid methylase; HMMPfam:IPR000241; ScanRegExp:IPR000241; ScanRegExp:IPR002052 YP_002936814.1 Unknown cell location; COG3291 FOG: PKD repeat; KEGG:K07218 cell surface protein; HMMPfam:IPR000668; BlastProDom:IPR000668; HMMPanther:IPR013128; HMMSmart:IPR000668; ScanRegExp:IPR000169 YP_002936815.1 Unknown cell location; COG0860 N-acetylmuramoyl-L-alanine amidase; KEGG:K01446 N-acetylmuramoyl-L-alanine amidase HMMPfam:IPR002508; Gene3D:IPR002508; HMMSmart:IPR002508 YP_002936816.1 Cytoplasmic, score:8.87; COG0127 Xanthosine triphosphate pyrophosphatase; KEGG:K00989 ribonuclease Ph HMMPfam:IPR002637; HMMPanther:IPR002637; HMMTigr:IPR002637 YP_002936817.1 CytoplasmicMembrane, score:9.99; COG2510 Predicted membrane protein; KEGG:K08978 hypothetical protein; HMMPfam:IPR000620; HMMPanther:IPR008521 YP_002936818.1 Cytoplasmic, score:8.87; COG0502 Biotin synthase and related enzymes; KEGG:K01012 biotin synthase HMMPfam:IPR007197; HMMPfam:IPR010722; Gene3D:IPR013785; HMMSmart:IPR006638; HMMTigr:IPR002684 YP_002936819.1 Cytoplasmic, score:8.87; COG3855 Uncharacterized protein conserved in bacteria; KEGG:K04041 fructose-1,6-bisphosphatase HMMPfam:IPR009164 YP_002936820.1 Extracellular, score:8.82 YP_002936821.1 Cytoplasmic, score:8.87 YP_002936822.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07657 response regulator; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002936823.1 CytoplasmicMembrane, score:10.00; COG0642 Signal transduction histidine kinase; KEGG:0sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; FPrintScan:IPR004358; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003660; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002936824.1 Unknown cell location YP_002936825.1 Unknown cell location YP_002936826.1 Cytoplasmic, score:8.87 YP_002936827.1 Cytoplasmic, score:8.87 YP_002936828.1 Unknown cell location YP_002936829.1 Unknown cell location; COG0845 Membrane-fusion protein YP_002936830.1 Cytoplasmic, score:8.87; COG0845 Membrane-fusion protein; superfamily:IPR011053 YP_002936831.1 CytoplasmicMembrane, score:9.99; NOG04033 non supervised orthologous group; HMMPfam:IPR003838 YP_002936832.1 CytoplasmicMembrane, score:9.49; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:K05685 K05686 ABC transporter related; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936833.1 CytoplasmicMembrane, score:9.49; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:K09810 ABC transporter, ATP-binding protein HMMPfam:IPR003439; BlastProDom:IPR002143; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936834.1 CytoplasmicMembrane, score:9.26; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; HMMPfam:IPR003594; superfamily:IPR003594 YP_002936835.1 Unknown cell location; COG3279 Response regulator of the LytR/AlgR family; KEGG:K07705 two-component response regulator; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002936836.1 Cytoplasmic, score:8.87; NOG16471 non supervised orthologous group; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936837.1 Unknown cell location YP_002936838.1 CytoplasmicMembrane, score:9.99; NOG34966 non supervised orthologous group; HMMPfam:IPR006741; HMMSmart:IPR006741 YP_002936839.1 CytoplasmicMembrane, score:10.00; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; KEGG:K06147 transporter, truncation; HMMPfam:IPR001140; HMMPfam:IPR003439; HMMPfam:IPR005074; BlastProDom:IPR003439; HMMSmart:IPR003593; HMMTigr:IPR005897; ScanRegExp:IPR003439 YP_002936840.1 Unknown cell location YP_002936841.1 Unknown cell location YP_002936842.1 Cytoplasmic, score:8.87; superfamily:IPR011256 YP_002936843.1 Unknown cell location; COG0845 Membrane-fusion protein; HMMPfam:IPR006143 YP_002936844.1 Unknown cell location; COG5492 Bacterial surface proteins containing Ig-like domains; HMMPfam:IPR003343; HMMSmart:IPR003343; superfamily:IPR008964 YP_002936845.1 Unknown cell location YP_002936846.1 CytoplasmicMembrane, score:9.99 YP_002936847.1 Unknown cell location YP_002936848.1 CytoplasmicMembrane, score:9.75 YP_002936849.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002936850.1 CytoplasmicMembrane, score:9.99 YP_002936851.1 Unknown cell location YP_002936852.1 CytoplasmicMembrane, score:9.75 YP_002936853.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002936854.1 Cytoplasmic, score:8.87 YP_002936855.1 Cytoplasmic, score:8.87; NOG34332 non supervised orthologous group; HMMTigr:IPR006442 YP_002936856.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07659 two-component response regulator; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002936857.1 CytoplasmicMembrane, score:9.49; COG0642 Signal transduction histidine kinase; KEGG:0sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003660; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002936858.1 Unknown cell location YP_002936859.1 CytoplasmicMembrane, score:9.99 YP_002936860.1 CytoplasmicMembrane, score:10.00 YP_002936861.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936862.1 Unknown cell location; NOG29868 non supervised orthologous group YP_002936863.1 CytoplasmicMembrane, score:9.99 YP_002936864.1 Unknown cell location; COG0860 N-acetylmuramoyl-L-alanine amidase; KEGG:K01446 N-acetylmuramoyl-L-alanine amidase domain protein HMMPfam:IPR002508; Gene3D:IPR002508 YP_002936865.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; Gene3D:IPR011991; HMMSmart:IPR001789; superfamily:IPR011006 YP_002936866.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936867.1 CytoplasmicMembrane, score:10.00; NOG16003 non supervised orthologous group YP_002936868.1 Cytoplasmic, score:9.36; COG0642 Signal transduction histidine kinase; KEGG:0sensory transduction protein kinase HMMPfam:IPR003594; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002936870.1 Cytoplasmic, score:8.87 YP_002936871.1 Unknown cell location YP_002936872.1 Extracellular, score:8.82 YP_002936873.1 CytoplasmicMembrane, score:10.00; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; KEGG:K02033 hypothetical protein; HMMPfam:IPR000515 YP_002936874.1 CytoplasmicMembrane, score:10.00; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; KEGG:K02034 hypothetical protein; HMMPfam:IPR000515 YP_002936875.1 CytoplasmicMembrane, score:9.82; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; KEGG:K02031 hypothetical protein; HMMPfam:IPR003439; HMMPfam:IPR013563; BlastProDom:IPR003439; HMMSmart:IPR003593; HMMTigr:IPR010066; ScanRegExp:IPR003439 YP_002936876.1 CytoplasmicMembrane, score:9.49; COG4608 ABC-type oligopeptide transport system, ATPase component; KEGG:K02032 oligopeptide/dipeptide ABC transporter, ATPase subunit; HMMPfam:IPR003439; HMMPfam:IPR013563; BlastProDom:IPR003439; HMMSmart:IPR003593; HMMTigr:IPR010066; ScanRegExp:IPR003439 YP_002936877.1 Cellwall, score:9.18; COG4166 ABC-type oligopeptide transport system, periplasmic component; KEGG:K02035 hypothetical protein; HMMPfam:IPR000914; ScanRegExp:IPR000914 YP_002936878.1 Cytoplasmic, score:8.87 YP_002936879.1 Cytoplasmic, score:8.87; COG5281 Phage-related minor tail protein YP_002936880.1 Cytoplasmic, score:8.87; COG4728 Uncharacterized protein conserved in bacteria; HMMPfam:IPR012868 YP_002936881.1 Cytoplasmic, score:8.87; COG2954 Uncharacterized protein conserved in bacteria; KEGG:K01768 adenylate cyclase HMMPfam:IPR008172; HMMPIR:IPR012042 YP_002936882.1 Cytoplasmic, score:8.87; COG0693 Putative intracellular protease/amidase; KEGG:K03152 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein; HMMPfam:IPR002818; HMMTigr:IPR006287 YP_002936883.1 Unknown cell location; NOG16862 non supervised orthologous group; HMMPfam:IPR001448; ScanRegExp:IPR001448 YP_002936884.1 Cytoplasmic, score:8.87; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); KEGG:K03545 trigger factor; HMMPfam:IPR001179; HMMPfam:IPR008880; HMMPfam:IPR008881; HMMPIR:IPR005215; HMMTigr:IPR005215 YP_002936885.1 Cytoplasmic, score:9.65; COG0740 Protease subunit of ATP-dependent Clp proteases; KEGG:K01358 ATP-dependent Clp protease, proteolytic subunit ClpP HMMPfam:IPR001907; HMMPanther:IPR001907; HMMTigr:IPR001907; ScanRegExp:IPR001907 YP_002936886.1 Cytoplasmic, score:8.87; COG1219 ATP-dependent protease Clp, ATPase subunit; KEGG:K03544 ATP-dependent protease ATP-binding subunit; HMMPfam:IPR010603; HMMPfam:IPR013093; HMMPanther:IPR004487; HMMSmart:IPR003593; HMMTigr:IPR004487 YP_002936887.1 Cytoplasmic, score:9.98; COG0466 ATP-dependent Lon protease, bacterial type; KEGG:K01338 ATP-dependent protease La HMMPfam:IPR003111; HMMPfam:IPR003959; HMMPfam:IPR008269; HMMSmart:IPR003111; HMMSmart:IPR003593; HMMTigr:IPR004815; ScanRegExp:IPR008268 YP_002936888.1 Unknown cell location; COG0218 Predicted GTPase; KEGG:K03978 GTPase EngB; HMMPfam:IPR002917; HMMTigr:IPR005289 YP_002936889.1 Unknown cell location; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; KEGG:K09815 adhesion lipoprotein; HMMPfam:IPR006127; ScanRegExp:IPR002048 YP_002936890.1 CytoplasmicMembrane, score:9.49; COG1121 ABC-type Mn/Zn transport systems, ATPase component; KEGG:K09817 manganese transport system ATP-binding protein MntA HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936891.1 CytoplasmicMembrane, score:10.00; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; KEGG:K09816 ABC-3 protein; HMMPfam:IPR001626 YP_002936892.1 Unknown cell location; NOG19502 non supervised orthologous group YP_002936893.1 CytoplasmicMembrane, score:9.49; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 methyl-accepting chemotaxis protein (MCP); HMMPfam:IPR004089; HMMSmart:IPR003660; HMMSmart:IPR004089 YP_002936894.1 Unknown cell location YP_002936895.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_002936896.1 Cytoplasmic, score:8.87; COG1802 Transcriptional regulators; KEGG:K05799 GntR domain protein; HMMPfam:IPR000524; HMMPfam:IPR011711; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002936897.1 CytoplasmicMembrane, score:7.63; NOG05957 non supervised orthologous group; KEGG:K06310 spore germination protein B1; HMMPfam:IPR004995 YP_002936898.1 CytoplasmicMembrane, score:9.97; NOG11550 non supervised orthologous group; KEGG:K06311 spore germination protein homolog YndE; HMMPfam:IPR004761 YP_002936899.1 Unknown cell location; NOG13215 non supervised orthologous group; KEGG:K06387 stage II sporulation protein R; HMMTigr:IPR014202 YP_002936900.1 Cytoplasmic, score:8.87; COG4506 Uncharacterized protein conserved in bacteria; HMMPfam:IPR015231; superfamily:IPR011038 YP_002936901.1 CytoplasmicMembrane, score:9.87 YP_002936902.1 Cytoplasmic, score:9.98; COG3867 Arabinogalactan endo-1,4-beta-galactosidase; KEGG:K01224 arabinogalactan endo-1,4-beta-galactosidase HMMPfam:IPR000160; HMMPfam:IPR011683; Gene3D:IPR013781; HMMSmart:IPR000160; HMMTigr:IPR000160 YP_002936903.1 Unknown cell location; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); KEGG:K03545 trigger factor; HMMPfam:IPR001179 YP_002936904.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002936905.1 CytoplasmicMembrane, score:9.99 YP_002936906.1 Extracellular, score:8.82 YP_002936907.1 Cytoplasmic, score:8.87; COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); KEGG:0arylsulfatase regulator (Fe-S oxidoreductase); HMMPfam:IPR007197 YP_002936908.1 CytoplasmicMembrane, score:10.00; COG0341 Preprotein translocase subunit SecF; KEGG:K03072 K03074 bifunctional preprotein translocase subunit SecD/SecF; HMMPfam:IPR003335; HMMTigr:IPR003335; HMMTigr:IPR005665; HMMTigr:IPR005791 YP_002936909.1 CytoplasmicMembrane, score:9.99; COG3326 Predicted membrane protein; HMMPfam:IPR010718 YP_002936910.1 Cytoplasmic, score:9.98; COG0366 Glycosidases; KEGG:K01208 cyclomaltodextrinase HMMPfam:IPR006047; Gene3D:IPR013781; HMMSmart:IPR006589 YP_002936911.1 CytoplasmicMembrane, score:9.99 YP_002936912.1 CytoplasmicMembrane, score:9.26; NOG25471 non supervised orthologous group YP_002936913.1 Cytoplasmic, score:8.87; COG1024 Enoyl-CoA hydratase/carnithine racemase; KEGG:K01715 3-hydroxybutyryl-coA dehydratase HMMPfam:IPR001753; ScanRegExp:IPR001753 YP_002936914.1 Unknown cell location YP_002936915.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528; ScanRegExp:IPR000215; ScanRegExp:IPR001241 YP_002936916.1 Unknown cell location YP_002936917.1 Cytoplasmic, score:8.87 YP_002936918.1 Cytoplasmic, score:8.87 YP_002936919.1 Unknown cell location YP_002936920.1 Cytoplasmic, score:8.87; COG1309 Transcriptional regulator; HMMPfam:IPR001647; Gene3D:IPR012287; superfamily:IPR009057 YP_002936921.1 Cytoplasmic, score:8.87; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); HMMPfam:IPR003033 YP_002936922.1 Cytoplasmic, score:8.87; COG1073 Hydrolases of the alpha/beta superfamily; KEGG:0hypothetical protein YP_002936923.1 Cytoplasmic, score:8.87; COG1020 Non-ribosomal peptide synthetase modules and related proteins; KEGG:K04780 non-ribosomal peptide synthetase, terminal component; HMMPfam:IPR001242 YP_002936924.1 Cytoplasmic, score:8.87; COG0236 Acyl carrier protein; HMMPfam:IPR006163; BlastProDom:IPR003231; Gene3D:IPR009081; superfamily:IPR009081 YP_002936925.1 Cytoplasmic, score:9.98; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG:K01897 long-chain-fatty-acid CoA ligase HMMPfam:IPR000873; ScanRegExp:IPR000235; ScanRegExp:IPR000873 YP_002936926.1 Cytoplasmic, score:8.87; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:0glycosyltransferase HMMPfam:IPR001173 YP_002936927.1 Cytoplasmic, score:8.87; NOG22931 non supervised orthologous group; HMMPfam:IPR002934 YP_002936928.1 Cytoplasmic, score:8.87; NOG19557 non supervised orthologous group; KEGG:0nucleotidyltransferase HMMPfam:IPR010235; HMMTigr:IPR010235 YP_002936929.1 Cytoplasmic, score:9.98; COG0379 Quinolinate synthase; KEGG:K00567 quinolinate synthetase complex, A subunit HMMPfam:IPR003473; HMMTigr:IPR003473 YP_002936930.1 Cytoplasmic, score:9.36; COG0029 Aspartate oxidase; KEGG:K00278 L-aspartate oxidase HMMPfam:IPR003953 YP_002936931.1 Cytoplasmic, score:8.87; COG0157 Nicotinate-nucleotide pyrophosphorylase; KEGG:K00767 nicotinate-nucleotide pyrophosphorylase HMMPfam:IPR002638; BlastProDom:IPR002638; Gene3D:IPR013785; HMMTigr:IPR004393; superfamily:IPR002638 YP_002936932.1 Cytoplasmic, score:8.87; COG1827 Predicted small molecule binding protein (contains 3H domain); KEGG:0hypothetical protein; HMMPfam:IPR004173; HMMPfam:IPR013196; Gene3D:IPR004173; Gene3D:IPR011991 YP_002936933.1 Unknown cell location YP_002936934.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K02027 hypothetical protein YP_002936935.1 Cytoplasmic, score:8.87; COG2382 Enterochelin esterase and related enzymes; KEGG:K07214 putative esterase; HMMPfam:IPR000801; superfamily:IPR014756 YP_002936936.1 Cytoplasmic, score:8.87; COG3405 Endoglucanase Y; KEGG:K01179 xylanase Y; HMMPfam:IPR002037; Gene3D:IPR012341; superfamily:IPR008928 YP_002936937.1 Unknown cell location; KEGG:0similar to acyl-CoA thioesterase I Gene3D:IPR013831; superfamily:IPR013830 YP_002936938.1 Cytoplasmic, score:8.87; COG3507 Beta-xylosidase; KEGG:K01198 K01209 arabinofuranosidase HMMPfam:IPR006710; Gene3D:IPR013320; HMMPanther:IPR006710 YP_002936939.1 Cytoplasmic, score:9.98; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K07720 two-component response regulator; HMMPfam:IPR000005; HMMPfam:IPR013096; Gene3D:IPR012287; Gene3D:IPR014710; HMMSmart:IPR000005; ScanRegExp:IPR000005; superfamily:IPR009057; superfamily:IPR011051 YP_002936940.1 Cytoplasmic, score:8.87; COG1472 Beta-glucosidase-related glycosidases; KEGG:K01188 beta-glucosidase HMMPfam:IPR001764; HMMPfam:IPR002772; superfamily:IPR002772 YP_002936941.1 Unknown cell location; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; KEGG:K07718 hypothetical protein HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR010559; Gene3D:IPR003594; superfamily:IPR003594 YP_002936942.1 Cytoplasmic, score:9.98; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; KEGG:K07720 hypothetical protein; HMMPfam:IPR000005; HMMPfam:IPR001789; BlastProDom:IPR001789; Gene3D:IPR012287; HMMSmart:IPR000005; HMMSmart:IPR001789; ScanRegExp:IPR000005; superfamily:IPR009057; superfamily:IPR011006 YP_002936943.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K02027 hypothetical protein YP_002936944.1 CytoplasmicMembrane, score:10.00; COG4209 ABC-type polysaccharide transport system, permease component; KEGG:K02025 transmembrane lipoprotein; HMMPfam:IPR000515 YP_002936945.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K02026 ABC transporter (permease); HMMPfam:IPR000515 YP_002936946.1 Extracellular, score:8.82 YP_002936947.1 CytoplasmicMembrane, score:10.00; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 methyl-accepting chemotaxis protein; HMMPfam:IPR004089; HMMSmart:IPR004089; superfamily:IPR010989 YP_002936948.1 Unknown cell location; KOG1721 FOG: Zn-finger YP_002936949.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin) YP_002936950.1 Cytoplasmic, score:8.87; COG0058 Glucan phosphorylase; KEGG:K00688 glycogen phosphorylase HMMPfam:IPR000811; HMMPIR:IPR000811; HMMPanther:IPR000811; HMMTigr:IPR011833; ScanRegExp:IPR000811 YP_002936951.1 CytoplasmicMembrane, score:9.99; NOG14154 non supervised orthologous group YP_002936952.1 Unknown cell location; COG5279 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain; KEGG:0peptidoglycan endo-beta-N-acetylglucosaminidase HMMSmart:IPR002931; ScanRegExp:IPR006162 YP_002936953.1 catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria. YP_002936954.1 Cytoplasmic, score:8.87; COG0205 6-phosphofructokinase; KEGG:K00850 6-phosphofructokinase HMMPfam:IPR000023; BlastProDom:IPR015913; HMMPIR:IPR012003; HMMPanther:IPR000023; HMMTigr:IPR012828; ScanRegExp:IPR015912 YP_002936955.1 Cytoplasmic, score:8.87; COG0566 rRNA methylases; KEGG:K03437 RNA methyltransferase, TrmH family, group 3; HMMPfam:IPR001537; HMMPfam:IPR013123; BlastProDom:IPR001537 YP_002936956.1 Cytoplasmic, score:8.87 YP_002936957.1 Extracellular, score:8.82 YP_002936958.1 Cytoplasmic, score:8.87; COG2357 Uncharacterized protein conserved in bacteria; KEGG:K00951 GTP pyrophosphokinase HMMPfam:IPR007685 YP_002936959.1 CytoplasmicMembrane, score:9.49; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; KEGG:K06020 ABC transporter-like HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002936960.1 CytoplasmicMembrane, score:9.99; COG3610 Uncharacterized conserved protein YP_002936961.1 CytoplasmicMembrane, score:9.99; COG2966 Uncharacterized conserved protein; HMMPfam:IPR010619 YP_002936962.1 Unknown cell location; COG3041 Uncharacterized protein conserved in bacteria; HMMPfam:IPR007712; HMMTigr:IPR004386; HMMTigr:IPR012753 YP_002936963.1 Unknown cell location; COG3077 DNA-damage-inducible protein J; KEGG:K07473 DNA-damage-inducible protein J, putative; HMMPfam:IPR007337; HMMTigr:IPR007337 YP_002936964.1 Cytoplasmic, score:8.87; NOG11305 non supervised orthologous group; KEGG:K06403 SpoVAA YP_002936965.1 CytoplasmicMembrane, score:9.99; NOG11552 non supervised orthologous group YP_002936966.1 Cytoplasmic, score:8.87 YP_002936967.1 Unknown cell location YP_002936968.1 CytoplasmicMembrane, score:9.49; COG3459 Cellobiose phosphorylase; KEGG:K00702 hypothetical protein HMMPfam:IPR009342; HMMPfam:IPR010383; HMMPfam:IPR010403; superfamily:IPR008928; superfamily:IPR011013 YP_002936969.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K02529 transcriptional regulator (LacI family); HMMPfam:IPR000843; HMMPfam:IPR001761; HMMSmart:IPR000843; superfamily:IPR010982 YP_002936970.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component YP_002936971.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K10189 binding-protein-dependent transport systems inner membrane component; HMMPfam:IPR000515 YP_002936972.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K10190 sugar ABC transporter permease; HMMPfam:IPR000515 YP_002936973.1 CytoplasmicMembrane, score:9.99; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; HMMPfam:IPR000620 YP_002936974.1 Cytoplasmic, score:8.87; COG0602 Organic radical activating enzymes; KEGG:K04068 organic radical activating enzyme HMMTigr:IPR012837 YP_002936975.1 CytoplasmicMembrane, score:9.26 YP_002936976.1 Cytoplasmic, score:8.87; NOG18602 non supervised orthologous group; KEGG:0flagellin lysine-N-methylase YP_002936977.1 Unknown cell location; COG0366 Glycosidases; KEGG:K01176 periplasmic alpha-amylase precursor HMMPfam:IPR005323; HMMPfam:IPR006047; Gene3D:IPR013781; HMMSmart:IPR006589; superfamily:IPR011050 YP_002936978.1 Cytoplasmic, score:8.87; COG2452 Predicted site-specific integrase-resolvase; KEGG:K07450 DNA invertase; HMMPfam:IPR000551; HMMPfam:IPR006119; Gene3D:IPR006119; ScanRegExp:IPR006118; superfamily:IPR006119; superfamily:IPR009061 YP_002936979.1 Cytoplasmic, score:8.87; COG0675 Transposase and inactivated derivatives; KEGG:K07496 probable transposase; HMMPfam:IPR001959; HMMPfam:IPR010095; HMMTigr:IPR010095 YP_002936980.1 CytoplasmicMembrane, score:9.26; COG0790 FOG: TPR repeat, SEL1 subfamily; HMMPfam:IPR006597; Gene3D:IPR011990; HMMSmart:IPR006597 YP_002936981.1 Cytoplasmic, score:9.98; COG0583 Transcriptional regulator; KEGG:K04761 hydrogen peroxide-inducible genes activator; HMMPfam:IPR000847; HMMPfam:IPR005119; Gene3D:IPR011991 YP_002936982.1 Cytoplasmic, score:9.98; COG0492 Thioredoxin reductase; KEGG:K00384 thioredoxin reductase HMMPfam:IPR013027; BlastProDom:IPR001327 YP_002936983.1 Cytoplasmic, score:8.87; COG0104 Adenylosuccinate synthase; KEGG:K01939 adenylosuccinate synthase HMMPfam:IPR001114; BlastProDom:IPR001114; HMMPanther:IPR001114; HMMSmart:IPR001114 YP_002936984.1 CytoplasmicMembrane, score:9.97; COG2966 Uncharacterized conserved protein; HMMPfam:IPR010619 YP_002936985.1 Cytoplasmic, score:8.87; NOG26512 non supervised orthologous group YP_002936986.1 Cytoplasmic, score:9.98; COG0583 Transcriptional regulator; KEGG:K01672 transcriptional regulator, LysR family HMMPfam:IPR000847; HMMPfam:IPR005119; Gene3D:IPR011991 YP_002936987.1 Cytoplasmic, score:9.98; COG1454 Alcohol dehydrogenase, class IV; KEGG:K00048 L-1,2-propanediol oxidoreductase HMMPfam:IPR001670; HMMTigr:IPR013460; ScanRegExp:IPR001670 YP_002936988.1 Cytoplasmic, score:8.87; COG1309 Transcriptional regulator; superfamily:IPR009057 YP_002936989.1 Unknown cell location; COG1598 Uncharacterized conserved protein; HMMPfam:IPR005357 YP_002936990.1 Unknown cell location; COG1724 Predicted periplasmic or secreted lipoprotein; HMMPfam:IPR012933 YP_002936991.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522 YP_002936992.1 Unknown cell location; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; HMMPfam:IPR013096; Gene3D:IPR014710; superfamily:IPR011051 YP_002936993.1 Cytoplasmic, score:8.87 YP_002936994.1 Unknown cell location YP_002936995.1 Extracellular, score:8.82 YP_002936996.1 Cytoplasmic, score:8.87; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002936997.1 Cytoplasmic, score:8.87; COG1192 ATPases involved in chromosome partitioning YP_002936998.1 Cytoplasmic, score:8.87; COG4962 Flp pilus assembly protein, ATPase CpaF; KEGG:K02283 putative secretion ATPase; HMMPfam:IPR001482; BlastProDom:IPR001482; ScanRegExp:IPR000217 YP_002936999.1 CytoplasmicMembrane, score:9.26; COG4965 Flp pilus assembly protein TadB YP_002937000.1 CytoplasmicMembrane, score:9.99; COG2064 Flp pilus assembly protein TadC; HMMPfam:IPR001992 YP_002937001.1 CytoplasmicMembrane, score:9.75 YP_002937002.1 Unknown cell location YP_002937003.1 Unknown cell location; COG3210 Large exoproteins involved in heme utilization or adhesion YP_002937004.1 Unknown cell location; COG3291 FOG: PKD repeat YP_002937005.1 Unknown cell location YP_002937006.1 CytoplasmicMembrane, score:9.99; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; HMMPfam:IPR000045 YP_002937007.1 Cytoplasmic, score:8.87; NOG10763 non supervised orthologous group; KEGG:K00908 serine/threonine protein kinase HMMPfam:IPR011647 YP_002937008.1 Unknown cell location; COG5022 Myosin heavy chain; HMMPfam:IPR000253; HMMSmart:IPR000253; superfamily:IPR008984 YP_002937009.1 Unknown cell location; COG0631 Serine/threonine protein phosphatase; KEGG:K01090 protein serine/threonine phosphatase HMMPanther:IPR015655; HMMSmart:IPR001932 YP_002937010.1 CytoplasmicMembrane, score:9.49; COG0515 Serine/threonine protein kinase; KEGG:K08884 serine/threonine protein kinase fused to TPR repeats domain HMMPfam:IPR000719; BlastProDom:IPR000719; HMMSmart:IPR001245; HMMSmart:IPR002290; ScanRegExp:IPR000719; ScanRegExp:IPR008271; superfamily:IPR011009 YP_002937011.1 Unknown cell location YP_002937012.1 Cellwall, score:9.38; COG5295 Autotransporter adhesin; BlastProDom:IPR001809; superfamily:IPR008964 YP_002937013.1 CytoplasmicMembrane, score:9.26; NOG09745 non supervised orthologous group; KEGG:K06405 stage V sporulation AC, SpoVAC; HMMPfam:IPR005562 YP_002937014.1 Unknown cell location YP_002937015.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002937016.1 Cytoplasmic, score:10.00; COG0172 Seryl-tRNA synthetase; KEGG:K01875 seryl-tRNA synthetase HMMPfam:IPR002314; HMMPfam:IPR015866; Gene3D:IPR015866; HMMPanther:IPR002317; HMMTigr:IPR002317; superfamily:IPR010978 YP_002937017.1 Unknown cell location YP_002937018.1 Cytoplasmic, score:8.87; NOG14977 non supervised orthologous group; HMMPfam:IPR005357; HMMPfam:IPR008651; superfamily:IPR010985 YP_002937019.1 Unknown cell location YP_002937020.1 CytoplasmicMembrane, score:9.99; COG1284 Uncharacterized conserved protein; HMMPfam:IPR003740 YP_002937021.1 Unknown cell location; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; KEGG:K01933 phosphoribosylformylglycinamidine cyclo-ligase HMMPfam:IPR000728; HMMPfam:IPR010918; HMMTigr:IPR004733 YP_002937022.1 Cytoplasmic, score:8.87; COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; KEGG:K00601 folate-dependent phosphoribosylglycinamide formyltransferase HMMPfam:IPR002376; Gene3D:IPR002376; HMMTigr:IPR004607; superfamily:IPR002376 YP_002937023.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_002937024.1 Cytoplasmic, score:8.87; COG0546 Predicted phosphatases; KEGG:K01091 hypothetical protein HMMPfam:IPR005834; HMMTigr:IPR006439 YP_002937025.1 Cytoplasmic, score:8.87; COG2200 FOG: EAL domain; KEGG:K02488 hypothetical protein; HMMPfam:IPR000160; HMMPfam:IPR001633; HMMSmart:IPR000160; HMMSmart:IPR001633; HMMTigr:IPR000160 YP_002937026.1 CytoplasmicMembrane, score:9.99; COG2252 Permeases; KEGG:K06901 putative xanthine/uracil permease family protein; HMMPfam:IPR006043; HMMPanther:IPR006043 YP_002937027.1 Cytoplasmic, score:8.87; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; KEGG:K03502 hypothetical protein in ImpB/MucB/SamB family of UV repair proteins; HMMPfam:IPR001126; HMMPanther:IPR001126 YP_002937028.1 Cytoplasmic, score:8.87 YP_002937029.1 Cytoplasmic, score:8.87; COG2243 Precorrin-2 methylase; KEGG:K03394 precorrin-2 methyltransferase HMMPfam:IPR000878; Gene3D:IPR014777; HMMPIR:IPR012382; HMMTigr:IPR006364; superfamily:IPR000878 YP_002937030.1 Cytoplasmic, score:8.87; COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; KEGG:0putative R-2-hydroxyglutaryl-CoA dehydratase subunit HMMPfam:IPR010327 YP_002937031.1 Cytoplasmic, score:8.87; COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; KEGG:0putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase, putative HMMPfam:IPR002731; HMMPfam:IPR010327; BlastProDom:IPR008275; HMMTigr:IPR008275 YP_002937032.1 Cytoplasmic, score:8.87; COG1145 Ferredoxin; HMMPfam:IPR001450 YP_002937033.1 Unknown cell location; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; HMMPfam:IPR000595; Gene3D:IPR014710; HMMSmart:IPR000595; superfamily:IPR000595 YP_002937034.1 Cytoplasmic, score:8.87; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; KEGG:K01607 gamma-carboxymuconolactone decarboxylase subunit-like protein HMMPfam:IPR003779; HMMPfam:IPR013096; Gene3D:IPR014710; superfamily:IPR011051 YP_002937035.1 Unknown cell location; COG1073 Hydrolases of the alpha/beta superfamily; KEGG:0hypothetical protein YP_002937036.1 Unknown cell location; ScanRegExp:IPR003439 YP_002937037.1 Cytoplasmic, score:8.87; COG2199 FOG: GGDEF domain; KEGG:0hypothetical protein HMMPfam:IPR000160; HMMSmart:IPR000160; HMMTigr:IPR000160 YP_002937038.1 Unknown cell location YP_002937039.1 CytoplasmicMembrane, score:9.82; COG0840 Methyl-accepting chemotaxis protein; KEGG:K05875 methyl-accepting chemotaxis protein; HMMPfam:IPR003660; HMMPfam:IPR004089; HMMSmart:IPR003660; HMMSmart:IPR004089 YP_002937040.1 Unknown cell location; COG1879 ABC-type sugar transport system, periplasmic component; KEGG:K02058 ABC-type sugar transport system, periplasmic component; HMMPfam:IPR001761 YP_002937041.1 Cytoplasmic, score:8.87; COG0732 Restriction endonuclease S subunits; KEGG:K01154 type I restriction-modification system specificity subunit HMMPfam:IPR000055 YP_002937042.1 Unknown cell location; COG0732 Restriction endonuclease S subunits; KEGG:K01154 type I restriction-modification system, S subunit HMMPfam:IPR000055; ScanRegExp:IPR002048 YP_002937043.1 Unknown cell location; COG0732 Restriction endonuclease S subunits YP_002937044.1 Extracellular, score:8.82 YP_002937046.1 Extracellular, score:7.50 YP_002937047.1 Unknown cell location; COG0346 Lactoylglutathione lyase and related lyases; HMMPfam:IPR004360; BlastProDom:IPR011588 YP_002937048.1 Unknown cell location; COG1671 Uncharacterized protein conserved in bacteria; KEGG:K09768 uncharacterized conserved protein, YQXD B.subtilis ortholog YP_002937049.1 Cytoplasmic, score:8.87 YP_002937050.1 Cytoplasmic, score:8.87; COG0242 N-formylmethionyl-tRNA deformylase; KEGG:0peptide deformylase HMMPfam:IPR000181; BlastProDom:IPR000181; Gene3D:IPR000181; HMMPIR:IPR000181; HMMPanther:IPR000181; superfamily:IPR000181 YP_002937051.1 Unknown cell location; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; HMMPfam:IPR002589 YP_002937052.1 Unknown cell location YP_002937053.1 Unknown cell location YP_002937054.1 Unknown cell location; NOG12186 non supervised orthologous group YP_002937055.1 Unknown cell location YP_002937056.1 Unknown cell location; COG0394 Protein-tyrosine-phosphatase; KEGG:K01104 protein-tyrosine-phosphatase HMMPfam:IPR000106; HMMPanther:IPR000106; HMMSmart:IPR000106; superfamily:IPR000106 YP_002937057.1 Cytoplasmic, score:8.87; COG3760 Uncharacterized conserved protein; KEGG:K01881 K01885 Bi-functional aminoacyl-tRNA synthetase, putative HMMPfam:IPR007214 YP_002937058.1 Cytoplasmic, score:8.87; COG0637 Predicted phosphatase/phosphohexomutase; KEGG:K01838 HAD-superfamily hydrolase subfamily IA, variant 3 HMMPfam:IPR005834; HMMTigr:IPR006402 YP_002937059.1 Cytoplasmic, score:8.87; COG3973 Superfamily I DNA and RNA helicases; KEGG:0UvrD/Rep helicase family protein HMMPanther:IPR000212 YP_002937060.1 Cytoplasmic, score:8.87 YP_002937061.1 Unknown cell location; COG0561 Predicted hydrolases of the HAD superfamily; KEGG:0hypothetical protein; HMMPfam:IPR013200; HMMPanther:IPR001757; HMMTigr:IPR000150; HMMTigr:IPR006379 YP_002937062.1 Extracellular, score:8.82 YP_002937063.1 Cytoplasmic, score:10.00; COG0017 Aspartyl/asparaginyl-tRNA synthetases; KEGG:K09759 aspartyl-tRNA synthetase, non-discriminating HMMPfam:IPR004364; HMMPfam:IPR004365; Gene3D:IPR012340; HMMPanther:IPR004364; HMMTigr:IPR004523; ScanRegExp:IPR010916 YP_002937064.1 Cytoplasmic, score:8.87; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; KEGG:K02435 glutamyl-tRNA(Gln) amidotransferase, C subunit HMMPfam:IPR000182; HMMPfam:IPR003837; HMMTigr:IPR003837 YP_002937065.1 Unknown cell location; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; KEGG:K01426 glutamyl-tRNA(Gln) amidotransferase, A subunit HMMPfam:IPR000120; Gene3D:IPR000120; HMMPanther:IPR000120; HMMTigr:IPR004412; superfamily:IPR000120 YP_002937066.1 Cytoplasmic, score:8.87; COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); KEGG:K02434 aspartyl/glutamyl-tRNA amidotransferase subunit B HMMPfam:IPR003789; HMMPfam:IPR006075; HMMPfam:IPR006107; HMMPanther:IPR004413; HMMTigr:IPR004413; ScanRegExp:IPR004413; superfamily:IPR003789 YP_002937067.1 binds and unfolds substrates as part of the ClpXP protease YP_002937068.1 Cytoplasmic, score:8.87; COG0420 DNA repair exonuclease; KEGG:0DNA repair exonuclease HMMPfam:IPR004843 YP_002937069.1 Cytoplasmic, score:8.87; COG4717 Uncharacterized conserved protein YP_002937070.1 Unknown cell location; COG1404 Subtilisin-like serine proteases; KEGG:0subtilase family protein HMMPfam:IPR000209; Gene3D:IPR000209; HMMPanther:IPR015500; ScanRegExp:IPR000209; superfamily:IPR000209 YP_002937071.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate YP_002937072.1 Cytoplasmic, score:9.98; COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); KEGG:K00618 arginine biosynthesis bifunctional protein ArgJ HMMPfam:IPR002813; BlastProDom:IPR002813; HMMPanther:IPR002813; HMMTigr:IPR002813 YP_002937073.1 Cytoplasmic, score:8.87; COG1522 Transcriptional regulators; KEGG:K03719 probable transcriptional regulator protein, AsnC family; HMMPfam:IPR000485; Gene3D:IPR011991; HMMSmart:IPR000485; superfamily:IPR011008 YP_002937074.1 Cytoplasmic, score:8.87; COG0345 Pyrroline-5-carboxylate reductase; KEGG:K00286 pyrroline-5-carboxylate reductase HMMPfam:IPR004455; HMMPIR:IPR000304; HMMPanther:IPR000304; HMMTigr:IPR000304; ScanRegExp:IPR000304 YP_002937075.1 Unknown cell location YP_002937076.1 Unknown cell location YP_002937077.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K01775 alanine racemase HMMPfam:IPR000843; HMMPfam:IPR001761; HMMSmart:IPR000843; ScanRegExp:IPR000843; superfamily:IPR010982 YP_002937078.1 Cytoplasmic, score:8.87; COG3316 Transposase and inactivated derivatives; HMMPfam:IPR001584; superfamily:IPR012337 YP_002937079.1 Unknown cell location; COG2182 Maltose-binding periplasmic proteins/domains; KEGG:K10113 ABC-type maltodextrin transport system, maltodextrin-binding periplasmic component; HMMPfam:IPR006059 YP_002937080.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K10109 ABC sugar transporter, inner membrane subunit; HMMPfam:IPR000515 YP_002937081.1 CytoplasmicMembrane, score:10.00; COG3833 ABC-type maltose transport systems, permease component; KEGG:K10110 putative sugar ABC transporter, permease protein; HMMPfam:IPR000515 YP_002937082.1 Cytoplasmic, score:9.98; COG0366 Glycosidases; KEGG:K01234 neopullulanase HMMPfam:IPR004185; HMMPfam:IPR006047; Gene3D:IPR013781; Gene3D:IPR013783; HMMSmart:IPR006589; superfamily:IPR014756 YP_002937083.1 Unknown cell location YP_002937084.1 Cytoplasmic, score:8.87; NOG34332 non supervised orthologous group; HMMTigr:IPR006442 YP_002937085.1 Cytoplasmic, score:8.87 YP_002937086.1 Cytoplasmic, score:8.87 YP_002937087.1 Extracellular, score:8.82 YP_002937088.1 Unknown cell location; NOG06536 non supervised orthologous group; HMMPfam:IPR007069 YP_002937089.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K04763 putative phage integrase/recombinase; HMMPfam:IPR002104; HMMPfam:IPR004107; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002937090.1 Unknown cell location YP_002937091.1 Cytoplasmic, score:8.87; COG4887 Uncharacterized metal-binding protein conserved in archaea; HMMPfam:IPR014997; superfamily:IPR003500 YP_002937092.1 Extracellular, score:8.82 YP_002937093.1 Unknown cell location YP_002937094.1 Unknown cell location YP_002937095.1 Cytoplasmic, score:8.87; COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; KEGG:K07713 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; HMMPfam:IPR002078; HMMPfam:IPR002197; HMMPfam:IPR010524; superfamily:IPR009057 YP_002937096.1 Extracellular, score:8.82 YP_002937097.1 Cytoplasmic, score:9.98; COG1454 Alcohol dehydrogenase, class IV; KEGG:K00001 alcohol dehydrogenase HMMPfam:IPR001670; ScanRegExp:IPR001670 YP_002937098.1 Cytoplasmic, score:8.87; COG1995 Pyridoxal phosphate biosynthesis protein; KEGG:K00097 4-hydroxythreonine-4-phosphate dehydrogenase HMMPfam:IPR005255; HMMTigr:IPR005255 YP_002937099.1 Cytoplasmic, score:8.87; COG3395 Uncharacterized protein conserved in bacteria; KEGG:K00097 hypothetical protein YP_002937100.1 Cytoplasmic, score:8.87; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; KEGG:K01714 dihydrodipicolinate synthase HMMPfam:IPR002220; BlastProDom:IPR002220; Gene3D:IPR013785; HMMPanther:IPR002220; HMMTigr:IPR005263 YP_002937101.1 Cytoplasmic, score:9.98; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; KEGG:K00058 phosphoglycerate dehydrogenase, putative HMMPfam:IPR006139; HMMPfam:IPR006140; HMMPanther:IPR015508; ScanRegExp:IPR006140 YP_002937102.1 CytoplasmicMembrane, score:9.99; COG0471 Di- and tricarboxylate transporters; KEGG:K03893 citrate transporter; HMMPfam:IPR004680 YP_002937103.1 Unknown cell location YP_002937104.1 Cytoplasmic, score:8.87 YP_002937105.1 Unknown cell location YP_002937106.1 Cytoplasmic, score:8.87; COG1672 Predicted ATPase (AAA+ superfamily); KEGG:0putative conserved hypothetical ATPase; HMMPfam:IPR011579 YP_002937107.1 Cytoplasmic, score:8.87; COG0620 Methionine synthase II (cobalamin-independent); KEGG:K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase HMMPfam:IPR002629; BlastProDom:IPR002629 YP_002937108.1 Unknown cell location YP_002937109.1 Extracellular, score:8.82 YP_002937110.1 Cytoplasmic, score:8.87; COG2703 Hemerythrin; KEGG:K07216 hemerythrin; HMMPfam:IPR012312; Gene3D:IPR012827; HMMTigr:IPR012827 YP_002937111.1 Unknown cell location YP_002937112.1 Unknown cell location; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); KEGG:K00059 hypothetical 3-oxoacyl-[acyl-carrier protein] reductase HMMPanther:IPR002198 YP_002937113.1 Cytoplasmic, score:9.65; COG0526 Thiol-disulfide isomerase and thioredoxins; KEGG:K03671 thiol-disulfide isomerase and thioredoxins; HMMPfam:IPR013766; Gene3D:IPR012335; HMMPanther:IPR015467; HMMTigr:IPR005746; ScanRegExp:IPR006662; superfamily:IPR012336 YP_002937114.1 Unknown cell location; COG0607 Rhodanese-related sulfurtransferase; KEGG:0rhodanese-related sulfurtransferase HMMPfam:IPR001763; HMMSmart:IPR001763 YP_002937115.1 Cytoplasmic, score:9.98; COG0607 Rhodanese-related sulfurtransferase; KEGG:K00356 NADH dehydrogenase HMMPfam:IPR001327; HMMPfam:IPR001763; HMMPfam:IPR004099; HMMPfam:IPR013027; BlastProDom:IPR001327; Gene3D:IPR004099; HMMSmart:IPR001763 YP_002937116.1 Cytoplasmic, score:8.87; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; KEGG:K01420 putative transcriptional regulator; HMMPfam:IPR000595; HMMPfam:IPR001808; Gene3D:IPR011991; Gene3D:IPR014710; HMMSmart:IPR001808; superfamily:IPR000595 YP_002937117.1 Cytoplasmic, score:8.87; COG1342 Predicted DNA-binding proteins; KEGG:0predicted DNA-binding protein; HMMPfam:IPR002852; HMMPfam:IPR003731; BlastProDom:IPR002852; superfamily:IPR013324 YP_002937118.1 Unknown cell location YP_002937119.1 Unknown cell location; COG1225 Peroxiredoxin; KEGG:K03386 peroxiredoxin HMMPfam:IPR000866; BlastProDom:IPR011594; Gene3D:IPR012335; superfamily:IPR012336 YP_002937120.1 Cytoplasmic, score:8.87; COG3022 Uncharacterized protein conserved in bacteria; KEGG:K09861 hypothetical protein; HMMPfam:IPR005583 YP_002937121.1 Cytoplasmic, score:8.87; COG4624 Iron only hydrogenase large subunit, C-terminal domain; KEGG:K00533 Fe-hydrogenase large subunit family protein HMMPfam:IPR001450; HMMPfam:IPR004108; ScanRegExp:IPR001450; superfamily:IPR009016 YP_002937122.1 Unknown cell location YP_002937123.1 Cytoplasmic, score:8.87; COG2206 HD-GYP domain; KEGG:K07814 response regulator receiver modulated metal dependent phosphohydrolase; HMMPfam:IPR006674; HMMSmart:IPR003607 YP_002937124.1 Cytoplasmic, score:8.87; COG2703 Hemerythrin; KEGG:K07216 hypothetical protein; HMMPfam:IPR012312; BlastProDom:IPR002063; Gene3D:IPR012827; HMMTigr:IPR012827 YP_002937125.1 Unknown cell location YP_002937126.1 Unknown cell location; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; KEGG:K00676 putative ribosomal-protein-alanine acetyltransferase YP_002937127.1 Unknown cell location YP_002937128.1 CytoplasmicMembrane, score:9.82; COG2217 Cation transport ATPase; KEGG:0hypothetical protein HMMPfam:IPR005834; HMMPfam:IPR008250; HMMPanther:IPR001757; HMMTigr:IPR001757; HMMTigr:IPR006416; ScanRegExp:IPR001757 YP_002937129.1 Cytoplasmic, score:8.87; NOG22931 non supervised orthologous group; HMMPfam:IPR002934 YP_002937130.1 Cytoplasmic, score:8.87; NOG19557 non supervised orthologous group; HMMPfam:IPR010235; HMMTigr:IPR010235 YP_002937131.1 Cytoplasmic, score:8.87; NOG17678 non supervised orthologous group YP_002937132.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528 YP_002937133.1 Cytoplasmic, score:8.87; NOG14451 non supervised orthologous group; KEGG:K00945 cytidylate kinase YP_002937134.1 Unknown cell location YP_002937135.1 Cytoplasmic, score:8.87; COG3864 Uncharacterized protein conserved in bacteria YP_002937136.1 Cytoplasmic, score:8.87; COG0714 MoxR-like ATPases; HMMPfam:IPR011704; HMMSmart:IPR003593 YP_002937137.1 Unknown cell location; COG1533 DNA repair photolyase; KEGG:K03716 spore photoproduct YP_002937138.1 Cytoplasmic, score:8.87; COG1533 DNA repair photolyase; KEGG:K03716 spore photoproduct YP_002937139.1 Cytoplasmic, score:9.98; COG0300 Short-chain dehydrogenases of various substrate specificities; KEGG:0predicted short-chain dehydrogenases/reductase HMMPfam:IPR002198; HMMPanther:IPR002198 YP_002937140.1 Cytoplasmic, score:8.87; COG0042 tRNA-dihydrouridine synthase; KEGG:K05541 putative protein involved in tRNA-dihydrouridine synthesis HMMPfam:IPR001269; Gene3D:IPR013785; HMMPIR:IPR001269; HMMPanther:IPR001269; ScanRegExp:IPR001269; ScanRegExp:IPR001400 YP_002937141.1 Extracellular, score:8.82 YP_002937142.1 Cytoplasmic, score:9.98; COG0207 Thymidylate synthase; KEGG:K00560 thymidylate synthase HMMPfam:IPR000398; BlastProDom:IPR000398; Gene3D:IPR000398; HMMPanther:IPR000398; superfamily:IPR000398 YP_002937143.1 Cytoplasmic, score:8.87; COG0262 Dihydrofolate reductase; KEGG:K00287 dihydrofolate reductase HMMPfam:IPR001796; HMMPanther:IPR012259 YP_002937144.1 Cytoplasmic, score:8.87; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; KEGG:K01652 acetolactate synthase, large subunit, biosynthetic type HMMPfam:IPR011766; HMMPfam:IPR012000; HMMPfam:IPR012001; HMMTigr:IPR012846; ScanRegExp:IPR000399 YP_002937145.1 Cytoplasmic, score:8.87; COG0440 Acetolactate synthase, small (regulatory) subunit; KEGG:K01651 IlvH HMMPfam:IPR002912; BlastProDom:IPR004789; HMMTigr:IPR004789 YP_002937146.1 Unknown cell location YP_002937147.1 Unknown cell location; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; Gene3D:IPR012349; superfamily:IPR009002 YP_002937148.1 Cytoplasmic, score:8.87; NOG36567 non supervised orthologous group; ScanRegExp:IPR002048 YP_002937149.1 Cytoplasmic, score:8.87; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 site-specific recombinase; HMMPfam:IPR006119; HMMPfam:IPR011109; Gene3D:IPR006119; ScanRegExp:IPR006118; ScanRegExp:IPR006121; superfamily:IPR006119 YP_002937150.1 Unknown cell location; COG4823 Abortive infection bacteriophage resistance protein; HMMPfam:IPR011664 YP_002937151.1 Unknown cell location YP_002937152.1 Cytoplasmic, score:8.87; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); KEGG:K01356 SOS-response transcriptional repressor, LexA HMMPfam:IPR001387; HMMPfam:IPR011056; Gene3D:IPR011056; HMMPanther:IPR014037; HMMSmart:IPR001387; ScanRegExp:IPR000223; superfamily:IPR010982; superfamily:IPR015927 YP_002937153.1 Unknown cell location; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002937154.1 Unknown cell location YP_002937155.1 Cytoplasmic, score:8.87 YP_002937156.1 Unknown cell location YP_002937157.1 Cytoplasmic, score:8.87 YP_002937158.1 Cytoplasmic, score:8.87 YP_002937159.1 Cytoplasmic, score:8.87 YP_002937160.1 Cytoplasmic, score:8.87 YP_002937161.1 Cytoplasmic, score:8.87 YP_002937162.1 Cytoplasmic, score:8.87 YP_002937163.1 Unknown cell location; COG0328 Ribonuclease HI; KEGG:K03469 ribonuclease H superfamily:IPR012337 YP_002937164.1 Cytoplasmic, score:8.87; COG1475 Predicted transcriptional regulators; KEGG:K03497 chromosome partitioning protein, ParB family; HMMPfam:IPR003115; HMMSmart:IPR003115 YP_002937165.1 Cytoplasmic, score:8.87 YP_002937166.1 Cytoplasmic, score:8.87 YP_002937167.1 Cytoplasmic, score:8.87 YP_002937168.1 Cytoplasmic, score:8.87 YP_002937169.1 Unknown cell location YP_002937170.1 Extracellular, score:8.82 YP_002937171.1 Extracellular, score:8.82 YP_002937173.1 Extracellular, score:8.82 YP_002937174.1 Cytoplasmic, score:8.87 YP_002937175.1 Unknown cell location YP_002937176.1 Unknown cell location YP_002937177.1 Cytoplasmic, score:8.87; COG3728 Phage terminase, small subunit; KEGG:K07474 hypothetical protein; HMMPfam:IPR005335; HMMPfam:IPR013249; superfamily:IPR013324 YP_002937178.1 Cytoplasmic, score:8.87; NOG36701 non supervised orthologous group; HMMTigr:IPR006437 YP_002937179.1 Cytoplasmic, score:8.87; NOG25118 non supervised orthologous group YP_002937180.1 Cytoplasmic, score:8.87; NOG17345 non supervised orthologous group; HMMPfam:IPR009319; ScanRegExp:IPR004827 YP_002937181.1 Cytoplasmic, score:8.87 YP_002937182.1 Extracellular, score:7.50 YP_002937183.1 Extracellular, score:8.82 YP_002937184.1 Unknown cell location; NOG36366 non supervised orthologous group YP_002937185.1 Unknown cell location; NOG39301 non supervised orthologous group YP_002937186.1 Unknown cell location YP_002937187.1 Unknown cell location YP_002937188.1 Unknown cell location YP_002937189.1 Cytoplasmic, score:8.87 YP_002937190.1 Unknown cell location YP_002937191.1 Cytoplasmic, score:8.87 YP_002937192.1 Cytoplasmic, score:8.87; NOG24969 non supervised orthologous group; HMMPfam:IPR009660 YP_002937193.1 Unknown cell location; COG5412 Phage-related protein; ScanRegExp:IPR000719 YP_002937194.1 Cytoplasmic, score:8.87 YP_002937195.1 Unknown cell location; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase); HMMTigr:IPR007119 YP_002937196.1 Unknown cell location; HMMPfam:IPR001087; superfamily:IPR013830 YP_002937197.1 Unknown cell location; NOG17363 non supervised orthologous group; superfamily:IPR013830 YP_002937198.1 CytoplasmicMembrane, score:9.26 YP_002937199.1 Cytoplasmic, score:8.87 YP_002937200.1 Unknown cell location; COG0582 Integrase; KEGG:K03733 site-specific tyrosine recombinase; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002937201.1 Extracellular, score:8.82 YP_002937202.1 Unknown cell location; COG3409 Putative peptidoglycan-binding domain-containing protein; KEGG:K07273 N-acetylmuramidase, autolytic enzyme, family 25 of glycosyl hydrolases ; peptodoglycan-binding domain; HMMPfam:IPR002053; BlastProDom:IPR002053; Gene3D:IPR013781; peptodoglycan-binding domain protein YP_002937203.1 Cytoplasmic, score:8.87; COG4824 Phage-related holin (Lysis protein); HMMPfam:IPR006480; HMMTigr:IPR006480 YP_002937204.1 Unknown cell location; NOG36567 non supervised orthologous group; HMMPfam:IPR002477; Gene3D:IPR002477; superfamily:IPR002477 YP_002937205.1 Cytoplasmic, score:8.87; COG0101 Pseudouridylate synthase; KEGG:K06043 tRNA pseudouridine synthase A HMMPfam:IPR001406; Gene3D:IPR001406; HMMPanther:IPR001406; HMMTigr:IPR001406 YP_002937206.1 Cytoplasmic, score:8.87; COG0608 Single-stranded DNA-specific exonuclease; KEGG:K07462 SsDNA exonuclease, RecJ HMMPfam:IPR001667; HMMPfam:IPR003156; HMMTigr:IPR004610 YP_002937207.1 Cytoplasmic, score:8.87; COG0840 Methyl-accepting chemotaxis protein YP_002937208.1 CytoplasmicMembrane, score:9.99; COG0671 Membrane-associated phospholipid phosphatase; superfamily:IPR000326 YP_002937209.1 Unknown cell location YP_002937211.1 Cytoplasmic, score:8.87; COG1874 Beta-galactosidase; KEGG:K01190 beta-galactosidase HMMPfam:IPR013529; HMMPfam:IPR013738; Gene3D:IPR013781 YP_002937212.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K01775 alanine racemase HMMPfam:IPR000843; HMMPfam:IPR001761; HMMSmart:IPR000843; superfamily:IPR010982 YP_002937213.1 CytoplasmicMembrane, score:9.99; COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; KEGG:K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase HMMPfam:IPR000715; HMMPanther:IPR000715; ScanRegExp:IPR003524 YP_002937214.1 Cytoplasmic, score:10.00; COG0119 Isopropylmalate/homocitrate/citramalate synthases; KEGG:0HMGL family protein HMMPfam:IPR000891; Gene3D:IPR013785 YP_002937215.1 Cytoplasmic, score:8.87 YP_002937216.1 Cytoplasmic, score:8.87; COG2189 Adenine specific DNA methylase Mod; KEGG:K00571 probable type III modification methyltransferase HMMPfam:IPR002941; ScanRegExp:IPR002052 YP_002937217.1 Cytoplasmic, score:8.87; NOG24126 non supervised orthologous group; KEGG:K01156 probable type III restriction enzyme HMMPfam:IPR006935 YP_002937218.1 Cytoplasmic, score:8.87 YP_002937219.1 Unknown cell location; NOG09859 non supervised orthologous group YP_002937220.1 Cytoplasmic, score:8.87; NOG14455 non supervised orthologous group YP_002937221.1 Unknown cell location; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen YP_002937222.1 Cytoplasmic, score:8.87; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen YP_002937223.1 Cytoplasmic, score:8.87; COG0642 Signal transduction histidine kinase; KEGG:K02484 hypothetical protein HMMPfam:IPR003594; HMMPfam:IPR003661; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002937224.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002937225.1 Extracellular, score:8.82 YP_002937226.1 CytoplasmicMembrane, score:9.99; NOG29636 non supervised orthologous group YP_002937227.1 CytoplasmicMembrane, score:9.99; NOG35330 non supervised orthologous group YP_002937228.1 CytoplasmicMembrane, score:9.99; NOG33694 non supervised orthologous group YP_002937229.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002937230.1 Cytoplasmic, score:8.87 YP_002937231.1 Unknown cell location YP_002937232.1 Extracellular, score:8.82 YP_002937233.1 Cytoplasmic, score:8.87 YP_002937234.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002937235.1 Cytoplasmic, score:8.87 YP_002937237.1 Cytoplasmic, score:8.87 YP_002937238.1 Unknown cell location; superfamily:IPR008979 YP_002937239.1 Unknown cell location; NOG26997 non supervised orthologous group; HMMSmart:IPR006026; ScanRegExp:IPR006025 YP_002937240.1 Unknown cell location YP_002937241.1 Unknown cell location YP_002937242.1 Cytoplasmic, score:9.98; COG3279 Response regulator of the LytR/AlgR family; KEGG:K07705 transcriptional regulator, LytR/AlgR family; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002937243.1 CytoplasmicMembrane, score:9.97; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; KEGG:K07700 sensor kinase protein HMMPfam:IPR003594; Gene3D:IPR003594; superfamily:IPR003594 YP_002937244.1 CytoplasmicMembrane, score:9.99 YP_002937245.1 Unknown cell location YP_002937246.1 Unknown cell location YP_002937247.1 CytoplasmicMembrane, score:9.75 YP_002937248.1 Unknown cell location YP_002937249.1 Unknown cell location YP_002937250.1 Cytoplasmic, score:8.87; COG0500 SAM-dependent methyltransferases; KEGG:0methyltransferase HMMPfam:IPR013216 YP_002937251.1 Cytoplasmic, score:8.87; COG1281 Disulfide bond chaperones of the HSP33 family; KEGG:K04083 chaperonin, 33 kDa; HMMPfam:IPR000397; BlastProDom:IPR000397 YP_002937252.1 Cytoplasmic, score:8.87; COG0388 Predicted amidohydrolase; KEGG:K01916 NAD synthetase HMMPfam:IPR003010; HMMPfam:IPR003694; Gene3D:IPR003010; Gene3D:IPR014729; HMMPIR:IPR014445; HMMTigr:IPR003694; superfamily:IPR003010 YP_002937253.1 Unknown cell location; COG3584 Uncharacterized protein conserved in bacteria; HMMPfam:IPR005074 YP_002937254.1 catalyzes the formation of asparagine from aspartate and ammonia YP_002937255.1 CytoplasmicMembrane, score:9.26 YP_002937256.1 Cytoplasmic, score:8.87; COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; KEGG:0predicted ATPase of the PP-loop superfamily implicated in cell cycle control HMMPfam:IPR011063; Gene3D:IPR014729; HMMSmart:IPR001763 YP_002937257.1 Unknown cell location; NOG10993 non supervised orthologous group YP_002937258.1 Cytoplasmic, score:8.87; COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; KEGG:K03751 molybdopterin biosynthesis protein (MoeB) or thiamin-thiazole moiety synthesis (ThiF); HMMPfam:IPR000594; superfamily:IPR009036 YP_002937259.1 Cytoplasmic, score:9.98; COG0466 ATP-dependent Lon protease, bacterial type; KEGG:K01338 ATP-dependent protease La HMMPfam:IPR003959; HMMSmart:IPR003593 YP_002937260.1 Cytoplasmic, score:8.87; COG0436 Aspartate/tyrosine/aromatic aminotransferase; KEGG:K00812 bifunctional HTH-domain containing protein/aminotransferase HMMPfam:IPR004839; Gene3D:IPR015421; Gene3D:IPR015422; superfamily:IPR015424 YP_002937261.1 CytoplasmicMembrane, score:10.00; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:0ABC transporter ATP-binding protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002937262.1 CytoplasmicMembrane, score:9.26; COG0577 ABC-type antimicrobial peptide transport system, permease component; KEGG:0hypothetical protein; HMMPfam:IPR003838; ScanRegExp:IPR000517 YP_002937263.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07657 phosphate regulon transcriptional regulatory protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; Gene3D:IPR011991; HMMSmart:IPR001789; superfamily:IPR011006 YP_002937264.1 CytoplasmicMembrane, score:9.49; COG0642 Signal transduction histidine kinase; KEGG:0sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002937265.1 CytoplasmicMembrane, score:10.00; COG0370 Fe2+ transport system protein B; KEGG:K04759 ferrous iron transport protein B; HMMPfam:IPR002917; HMMPfam:IPR007167; HMMPfam:IPR011619; HMMPfam:IPR011640; HMMPfam:IPR011642; HMMTigr:IPR003373; HMMTigr:IPR005225; superfamily:IPR008988 YP_002937266.1 Cytoplasmic, score:8.87; COG2017 Galactose mutarotase and related enzymes; KEGG:K01785 putative mutarotase HMMPfam:IPR008183; Gene3D:IPR014718; superfamily:IPR011013 YP_002937267.1 CytoplasmicMembrane, score:9.99; HMMPfam:IPR012963 YP_002937268.1 Unknown cell location; COG1695 Predicted transcriptional regulators; HMMPfam:IPR005149; Gene3D:IPR011991 YP_002937269.1 Cytoplasmic, score:8.87 YP_002937270.1 Unknown cell location; COG0561 Predicted hydrolases of the HAD superfamily; KEGG:0HAD superfamily hydrolase; HMMPfam:IPR013200; HMMTigr:IPR000150; HMMTigr:IPR006379; ScanRegExp:IPR000150 YP_002937271.1 Unknown cell location YP_002937272.1 Cytoplasmic, score:8.87 YP_002937273.1 Cytoplasmic, score:8.87 YP_002937274.1 Extracellular, score:7.50; ScanRegExp:IPR013838 YP_002937275.1 Cytoplasmic, score:8.87; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K02854 L-rhamnose operon transcriptional activator; HMMPfam:IPR000005; Gene3D:IPR012287; Gene3D:IPR014710; HMMSmart:IPR000005; superfamily:IPR003313; superfamily:IPR009057 YP_002937276.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K10188 putative sugar ABC transporter, periplasmic binding protein; HMMPfam:IPR006059 YP_002937277.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K10189 lactose transport system (permease); HMMPfam:IPR000515 YP_002937278.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K10190 lactose transport system (permease); HMMPfam:IPR000515 YP_002937279.1 Cytoplasmic, score:8.87; COG3250 Beta-galactosidase/beta-glucuronidase; KEGG:K01190 beta-galactosidase HMMPfam:IPR004199; HMMPfam:IPR006102; HMMPfam:IPR006103; HMMPfam:IPR006104; Gene3D:IPR013781; Gene3D:IPR013812; Gene3D:IPR014718; ScanRegExp:IPR001220; ScanRegExp:IPR006101; superfamily:IPR006102; superfamily:IPR008979; superfamily:IPR011013 YP_002937280.1 Cytoplasmic, score:8.87; COG3867 Arabinogalactan endo-1,4-beta-galactosidase; KEGG:0glycosyl hydrolase, family 53 HMMPfam:IPR011683; Gene3D:IPR013781 YP_002937281.1 Cytoplasmic, score:8.87; COG0153 Galactokinase; KEGG:K00849 galactokinase HMMPfam:IPR006204; HMMPfam:IPR013750; Gene3D:IPR014721; HMMPIR:IPR000705; HMMTigr:IPR000705; ScanRegExp:IPR000705; ScanRegExp:IPR006203 YP_002937282.1 catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism YP_002937283.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528 YP_002937284.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_002937285.1 CytoplasmicMembrane, score:9.99; COG2426 Predicted membrane protein; HMMPfam:IPR009577 YP_002937286.1 CytoplasmicMembrane, score:9.99; COG1266 Predicted metal-dependent membrane protease; KEGG:0CAAX amino terminal protease family protein; HMMPfam:IPR003675 YP_002937287.1 Cytoplasmic, score:8.87; COG4496 Uncharacterized protein conserved in bacteria; HMMPfam:IPR000831; HMMTigr:IPR013368; superfamily:IPR010921 YP_002937288.1 Cytoplasmic, score:8.87; NOG13858 non supervised orthologous group; HMMPfam:IPR014975; superfamily:IPR009061 YP_002937289.1 Cytoplasmic, score:8.87; COG0210 Superfamily I DNA and RNA helicases; KEGG:K03657 ATP-dependent DNA helicase PcrA HMMPfam:IPR000212; HMMPanther:IPR000212 YP_002937290.1 Unknown cell location YP_002937291.1 Cytoplasmic, score:8.87; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; KEGG:K00557 tRNA (uracil-5-) -methyltransferase HMMPfam:IPR002792; HMMPfam:IPR007848; HMMTigr:IPR001566; ScanRegExp:IPR010280 YP_002937292.1 Unknown cell location YP_002937293.1 Cytoplasmic, score:8.87; COG5635 Predicted NTPase (NACHT family) YP_002937294.1 Cytoplasmic, score:8.87; COG0286 Type I restriction-modification system methyltransferase subunit; KEGG:K03427 type I restriction-modification system, M subunit HMMPfam:IPR003356; HMMTigr:IPR004546; ScanRegExp:IPR002052 YP_002937295.1 Unknown cell location YP_002937296.1 Cytoplasmic, score:8.87; COG0732 Restriction endonuclease S subunits; KEGG:K01154 putative type I restriction enzyme (specificity subunit) HMMPfam:IPR000055 YP_002937297.1 Cytoplasmic, score:8.87; COG0732 Restriction endonuclease S subunits; KEGG:K01154 anti-codon nuclease masking agent (PrrB) HMMPfam:IPR000055 YP_002937298.1 Unknown cell location YP_002937299.1 Cytoplasmic, score:8.87; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; KEGG:K01152 type I site-specific deoxyribonuclease, HsdR family HMMPfam:IPR006935; HMMPfam:IPR007409; HMMSmart:IPR014001; HMMTigr:IPR004473 YP_002937300.1 Cytoplasmic, score:8.87; NOG11361 non supervised orthologous group YP_002937301.1 CytoplasmicMembrane, score:9.99; COG0577 ABC-type antimicrobial peptide transport system, permease component; HMMPfam:IPR003838 YP_002937302.1 Cytoplasmic, score:9.98; COG1940 Transcriptional regulator/sugar kinase; KEGG:K02565 putative N-acetylglucosamine repressor; HMMPfam:IPR000600 YP_002937303.1 Unknown cell location YP_002937304.1 Cytoplasmic, score:9.98; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; KEGG:K00008 R04B5.5 HMMPfam:IPR013149; HMMPfam:IPR013154; BlastProDom:IPR011597; HMMPanther:IPR002085; ScanRegExp:IPR002328; superfamily:IPR011032 YP_002937305.1 Cytoplasmic, score:8.87; NOG36288 non supervised orthologous group; KEGG:K01759 lactoylglutathione lyase related lyase HMMPfam:IPR004360 YP_002937306.1 CytoplasmicMembrane, score:10.00; COG2211 Na+/melibiose symporter and related transporters; KEGG:K03292 glucuronide permease; HMMTigr:IPR001927 YP_002937307.1 Cytoplasmic, score:9.98; COG0524 Sugar kinases, ribokinase family; KEGG:K00847 pfkB-type carbohydrate kinase family protein HMMPfam:IPR011611; ScanRegExp:IPR002173 YP_002937308.1 CytoplasmicMembrane, score:9.26; COG1284 Uncharacterized conserved protein; HMMPfam:IPR003740 YP_002937309.1 Cytoplasmic, score:8.87; COG2326 Uncharacterized conserved protein; KEGG:0polyphosphate:AMP phosphotransferase HMMPfam:IPR005660 YP_002937310.1 Cytoplasmic, score:8.87; COG0561 Predicted hydrolases of the HAD superfamily; KEGG:0hypothetical protein; HMMPfam:IPR013200; HMMTigr:IPR000150; HMMTigr:IPR006379 YP_002937311.1 CytoplasmicMembrane, score:10.00; COG1115 Na+/alanine symporter; KEGG:K03310 sodium:alanine symporter family protein; HMMPfam:IPR001463; HMMTigr:IPR001463; ScanRegExp:IPR001463 YP_002937312.1 CytoplasmicMembrane, score:9.99; COG0733 Na+-dependent transporters of the SNF family; KEGG:K03308 Na+-dependent transporters of the SNF family; HMMPfam:IPR000175; BlastProDom:IPR000175; HMMPanther:IPR000175; ScanRegExp:IPR000175 YP_002937313.1 Cytoplasmic, score:8.87; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); superfamily:IPR013324; superfamily:IPR013325 YP_002937314.1 Extracellular, score:8.82; COG1361 S-layer domain; HMMTigr:IPR001434 YP_002937315.1 Cytoplasmic, score:9.98; COG0714 MoxR-like ATPases; KEGG:K03924 hypothetical protein HMMPfam:IPR011703 YP_002937316.1 CytoplasmicMembrane, score:9.75; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain); HMMPfam:IPR002881 YP_002937317.1 CytoplasmicMembrane, score:9.99; COG1305 Transglutaminase-like enzymes, putative cysteine proteases; HMMPfam:IPR002931; HMMSmart:IPR002931 YP_002937318.1 CytoplasmicMembrane, score:10.00; COG2190 Phosphotransferase system IIA components; KEGG:K00890 PTS system, glucose subfamily, IIA subunit HMMPfam:IPR001127; HMMPfam:IPR001996; HMMPfam:IPR003352; BlastProDom:IPR001127; Gene3D:IPR001996; HMMTigr:IPR001127; HMMTigr:IPR011535; ScanRegExp:IPR001127; ScanRegExp:IPR001996; superfamily:IPR001996; superfamily:IPR011055 YP_002937319.1 Cytoplasmic, score:8.87; COG3711 Transcriptional antiterminator; KEGG:K03480 probable transcription antiterminator; HMMPfam:IPR011608 YP_002937320.1 Cytoplasmic, score:8.87; COG0012 Predicted GTPase, probable translation factor; KEGG:0translation-associated GTPase; HMMPfam:IPR002917; HMMPfam:IPR013029; Gene3D:IPR012675; HMMPanther:IPR004396; HMMTigr:IPR004396; superfamily:IPR012676 YP_002937321.1 Cytoplasmic, score:8.87; COG1873 Uncharacterized conserved protein; HMMPfam:IPR007903; HMMTigr:IPR014238; superfamily:IPR011033 YP_002937322.1 Cytoplasmic, score:8.87; COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains; KEGG:K07738 hypothetical protein; HMMPfam:IPR005144; HMMTigr:IPR003796 YP_002937323.1 Unknown cell location YP_002937324.1 Cytoplasmic, score:8.87; COG2179 Predicted hydrolase of the HAD superfamily; KEGG:0hypothetical protein; HMMPfam:IPR005834; HMMTigr:IPR006549; HMMTigr:IPR010021 YP_002937325.1 Cytoplasmic, score:8.87; COG0698 Ribose 5-phosphate isomerase RpiB; KEGG:K01808 ribose-5-phosphate isomerase B HMMPfam:IPR003500; Gene3D:IPR003500; HMMPIR:IPR003500; HMMTigr:IPR003500; HMMTigr:IPR004785; superfamily:IPR003500 YP_002937326.1 Cytoplasmic, score:9.98; COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); KEGG:K02356 translation elongation factor P; HMMPfam:IPR001059; HMMPfam:IPR013185; HMMPfam:IPR015365; Gene3D:IPR012340; Gene3D:IPR014722; HMMPIR:IPR011768; HMMTigr:IPR011768; ScanRegExp:IPR013852; superfamily:IPR008991 YP_002937327.1 CytoplasmicMembrane, score:9.99; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; KEGG:K06409 stage V sporulation protein B; HMMPfam:IPR002797 YP_002937328.1 Cytoplasmic, score:8.87; COG0561 Predicted hydrolases of the HAD superfamily; KEGG:0conserved hypothetical protein; HMMPfam:IPR013200; HMMTigr:IPR000150; HMMTigr:IPR006379 YP_002937329.1 Cytoplasmic, score:8.87; COG1410 Methionine synthase I, cobalamin-binding domain; KEGG:K00548 5-methyltetrahydrofolate--homocysteine methyltransferase HMMPfam:IPR000489; HMMPfam:IPR003726; HMMPfam:IPR003759; HMMPfam:IPR006158; Gene3D:IPR000489; Gene3D:IPR003726; Gene3D:IPR003759; Gene3D:IPR006158; superfamily:IPR003726; superfamily:IPR003759; superfamily:IPR006158; superfamily:IPR011005 YP_002937330.1 Cytoplasmic, score:8.87; COG0194 Guanylate kinase; KEGG:K00942 guanylate kinase HMMSmart:IPR008145 YP_002937331.1 Cytoplasmic, score:9.98; COG2873 O-acetylhomoserine sulfhydrylase; KEGG:K01740 O-acetylhomoserine/O-acetylserine sulfhydrylase HMMPfam:IPR000277; Gene3D:IPR015421; Gene3D:IPR015422; HMMPanther:IPR000277; HMMPanther:IPR006235; HMMTigr:IPR006235; ScanRegExp:IPR000277; superfamily:IPR015424 YP_002937332.1 Cytoplasmic, score:8.87; COG0280 Phosphotransacetylase; KEGG:K00625 phosphate acetyltransferase HMMPfam:IPR002505; HMMPIR:IPR012147; HMMTigr:IPR004614 YP_002937333.1 Unknown cell location YP_002937334.1 Cytoplasmic, score:8.87; COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; KEGG:K01770 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase HMMPfam:IPR003526; Gene3D:IPR003526; HMMTigr:IPR003526; ScanRegExp:IPR003526; superfamily:IPR003526 YP_002937335.1 Cytoplasmic, score:9.98; COG0215 Cysteinyl-tRNA synthetase; KEGG:K01883 cysteinyl-tRNA synthetase HMMPfam:IPR015803; Gene3D:IPR014729; HMMPanther:IPR015804; HMMTigr:IPR002308; superfamily:IPR009080 YP_002937336.1 Cytoplasmic, score:8.87; COG1939 Uncharacterized protein conserved in bacteria; KEGG:K01162 possible ribonuclease III HMMPfam:IPR000999; HMMPIR:IPR008226; superfamily:IPR000999 YP_002937337.1 Cytoplasmic, score:8.87; COG0566 rRNA methylases; KEGG:K03218 putative tRNA/rRNA methyltransferase HMMPfam:IPR001537; HMMPfam:IPR013123; BlastProDom:IPR001537; HMMTigr:IPR004441 YP_002937338.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_002937339.1 Cytoplasmic, score:9.98; COG4862 Negative regulator of genetic competence, sporulation and motility; HMMPfam:IPR008681 YP_002937340.1 Cytoplasmic, score:9.98; COG0784 FOG: CheY-like receiver; KEGG:K03413 two-component response regulator involved in modulation of flagellar; HMMPfam:IPR001789; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002937341.1 Unknown cell location; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation; KEGG:K02417 flagellar motor switch protein; HMMPfam:IPR007597 YP_002937342.1 Unknown cell location; COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein; KEGG:K07335 putative simple sugar transport system substrate-binding protein; HMMPfam:IPR003760; ScanRegExp:IPR002048 YP_002937343.1 Cytoplasmic, score:8.87; NOG32807 non supervised orthologous group; HMMPfam:IPR004843 YP_002937344.1 Unknown cell location; COG0419 ATPase involved in DNA repair; KEGG:0soluble lytic murein transglycosylase precursor HMMPfam:IPR008258 YP_002937345.1 Cytoplasmic, score:8.87; COG0019 Diaminopimelate decarboxylase; KEGG:K01586 diaminopimelate decarboxylase HMMPfam:IPR000183; superfamily:IPR009006 YP_002937346.1 Unknown cell location; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982; superfamily:IPR015927 YP_002937347.1 Cytoplasmic, score:8.87 YP_002937348.1 Cytoplasmic, score:8.87; COG3855 Uncharacterized protein conserved in bacteria; KEGG:K04041 fructose-1,6-bisphosphatase HMMPfam:IPR009164; HMMPIR:IPR009164 YP_002937349.1 Cytoplasmic, score:8.87 YP_002937350.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07775 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002937351.1 Unknown cell location; COG0642 Signal transduction histidine kinase; KEGG:0sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003660; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002937352.1 Unknown cell location YP_002937353.1 Cytoplasmic, score:9.98; COG0784 FOG: CheY-like receiver; KEGG:K03415 modulation of CheA activity in response to attractants (chemotaxis protein); HMMPfam:IPR001789; HMMPfam:IPR002545; BlastProDom:IPR001789; HMMSmart:IPR001789; HMMSmart:IPR002545; superfamily:IPR002545; superfamily:IPR011006 YP_002937354.1 Unknown cell location; KOG1808 AAA ATPase containing von Willebrand factor type A (vWA) domain YP_002937355.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_002937356.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002937357.1 Unknown cell location; COG0692 Uracil DNA glycosylase; KEGG:K03648 uracil-DNA glycosylase HMMPfam:IPR005122; BlastProDom:IPR003249; HMMPanther:IPR002043; HMMTigr:IPR002043; ScanRegExp:IPR002043 YP_002937358.1 Unknown cell location; COG1345 Flagellar capping protein YP_002937359.1 CytoplasmicMembrane, score:9.82; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; KEGG:0ABC transporte, ATP binding protein HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002937360.1 Unknown cell location; COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; KEGG:K03737 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit HMMPfam:IPR001450; HMMPfam:IPR002869; HMMPfam:IPR002880; HMMPfam:IPR011766; Gene3D:IPR015941; HMMPIR:IPR011895; HMMTigr:IPR011895; ScanRegExp:IPR001450; superfamily:IPR009014 YP_002937361.1 Unknown cell location YP_002937362.1 Cytoplasmic, score:8.87; NOG19641 non supervised orthologous group YP_002937363.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_002937364.1 Cytoplasmic, score:9.98; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K02855 positive regulator for rhaBAD operon; HMMPfam:IPR000005; HMMPfam:IPR003313; Gene3D:IPR012287; HMMSmart:IPR000005; superfamily:IPR003313; superfamily:IPR009057 YP_002937365.1 Cytoplasmic, score:9.98; COG0253 Diaminopimelate epimerase; KEGG:K01778 diaminopimelate epimerase HMMPfam:IPR001653; HMMTigr:IPR001653; ScanRegExp:IPR001653 YP_002937366.1 Cytoplasmic, score:8.87; COG0769 UDP-N-acetylmuramyl tripeptide synthase; KEGG:K01928 UDP-N-acetylmuramyl-tripeptide synthetases HMMPfam:IPR000713; HMMPfam:IPR004101; HMMPfam:IPR013221; HMMTigr:IPR005761; ScanRegExp:IPR001645 YP_002937367.1 Cytoplasmic, score:8.87; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; KEGG:K01714 dihydrodipicolinate synthase HMMPfam:IPR002220; BlastProDom:IPR002220; Gene3D:IPR013785; HMMPanther:IPR002220; HMMTigr:IPR005263; ScanRegExp:IPR002173; ScanRegExp:IPR002220 YP_002937368.1 Cytoplasmic, score:8.87; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; KEGG:0nitrilotriacetate monooxygenase component B HMMPfam:IPR002563; Gene3D:IPR012349; superfamily:IPR009002 YP_002937369.1 Unknown cell location; NOG13733 non supervised orthologous group YP_002937370.1 Cytoplasmic, score:8.87; COG1242 Predicted Fe-S oxidoreductase; KEGG:0hypothetical protein; HMMPfam:IPR007197; Gene3D:IPR013785; HMMPanther:IPR005839; HMMSmart:IPR006638; HMMTigr:IPR005911 YP_002937371.1 Unknown cell location; COG0281 Malic enzyme; KEGG:K00027 malate dehydrogenase (oxaloacetate-decarboxylating) HMMPfam:IPR012301; HMMPfam:IPR012302; ScanRegExp:IPR015884 YP_002937372.1 Cytoplasmic, score:8.87; COG1158 Transcription termination factor; KEGG:K03628 transcription termination factor Rho; HMMPfam:IPR000194; HMMPfam:IPR011113; HMMSmart:IPR003593; HMMSmart:IPR011129; HMMTigr:IPR004665 YP_002937373.1 Extracellular, score:8.82; COG0254 Ribosomal protein L31; KEGG:K02909 ribosomal protein L31; HMMPfam:IPR002150; HMMTigr:IPR002150; ScanRegExp:IPR002150 YP_002937374.1 CytoplasmicMembrane, score:9.97; COG3872 Predicted metal-dependent enzyme; KEGG:K09153 hypothetical protein; HMMPfam:IPR010787 YP_002937375.1 Cytoplasmic, score:8.87; COG2890 Methylase of polypeptide chain release factors; KEGG:K02493 predicted rRNA or tRNA methylase HMMPfam:IPR007848; HMMTigr:IPR004556; ScanRegExp:IPR002052 YP_002937376.1 Cytoplasmic, score:9.98; COG0216 Protein chain release factor A; KEGG:K02835 peptide chain release factor 1; HMMPfam:IPR000352; HMMPfam:IPR005139; HMMPanther:IPR004373; HMMTigr:IPR004373; ScanRegExp:IPR000352 YP_002937377.1 CytoplasmicMembrane, score:10.00; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; KEGG:K02029 amino acid ABC transporter, permease protein; HMMPfam:IPR000515; HMMPfam:IPR001638; HMMSmart:IPR001638; HMMTigr:IPR010065; ScanRegExp:IPR001638 YP_002937378.1 CytoplasmicMembrane, score:9.49; COG1126 ABC-type polar amino acid transport system, ATPase component; KEGG:K02028 glutamine ABC transporter ATP-binding protein HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002937379.1 Cytoplasmic, score:8.87; COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein; KEGG:K03469 RNAse H family protein HMMPfam:IPR002156; Gene3D:IPR011320; superfamily:IPR009027; superfamily:IPR012337 YP_002937380.1 Cytoplasmic, score:9.98; COG0337 3-dehydroquinate synthetase; KEGG:K01735 3-dehydroquinate synthase HMMPfam:IPR002658; HMMPanther:IPR002658; HMMTigr:IPR002658 YP_002937381.1 Cytoplasmic, score:8.87; COG1323 Predicted nucleotidyltransferase; HMMPfam:IPR008513; HMMTigr:IPR004821 YP_002937382.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_002937383.1 Cytoplasmic, score:8.87; COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; KEGG:0predicted Zn-finger-like protein, possible nucleic acid binding; HMMPfam:IPR003772 YP_002937384.1 Unknown cell location; COG0333 Ribosomal protein L32; HMMPfam:IPR002677; BlastProDom:IPR002878; HMMTigr:IPR002677 YP_002937385.1 Cytoplasmic, score:8.87 YP_002937386.1 Unknown cell location; COG0416 Fatty acid/phospholipid biosynthesis enzyme; KEGG:K03621 fatty acid/phospholipid synthesis protein plsX; HMMPfam:IPR003664; BlastProDom:IPR003664; HMMPIR:IPR012281; HMMTigr:IPR003664 YP_002937387.1 carries the fatty acid chain in fatty acid biosynthesis YP_002937388.1 Cytoplasmic, score:9.98; COG0571 dsRNA-specific ribonuclease; KEGG:K03685 ribonuclease III HMMPfam:IPR000999; HMMPfam:IPR001159; Gene3D:IPR000999; Gene3D:IPR014720; HMMSmart:IPR000999; HMMSmart:IPR001159; HMMTigr:IPR011907; ScanRegExp:IPR000999; superfamily:IPR000999 YP_002937389.1 Cytoplasmic, score:9.98; COG1196 Chromosome segregation ATPases; KEGG:K03529 chromosome segregation protein SMC; HMMPfam:IPR003395; HMMPfam:IPR010935; HMMTigr:IPR005289; HMMTigr:IPR011890; superfamily:IPR009053 YP_002937390.1 Cytoplasmic, score:8.87; COG0552 Signal recognition particle GTPase; KEGG:K03110 cell division protein FtsY; HMMPfam:IPR000897; HMMPfam:IPR013822; BlastProDom:IPR000897; Gene3D:IPR013822; HMMSmart:IPR003593; HMMTigr:IPR004390; ScanRegExp:IPR000897; superfamily:IPR013822 YP_002937391.1 catalyzes the formation of 2-oxobutanoate from L-threonine YP_002937392.1 Cytoplasmic, score:8.87; COG2739 Uncharacterized protein conserved in bacteria; KEGG:K09787 hypothetical protein; HMMPfam:IPR007394; Gene3D:IPR011991; superfamily:IPR013324 YP_002937393.1 Cytoplasmic, score:8.87; COG0541 Signal recognition particle GTPase; KEGG:K03106 signal recognition particle protein; HMMPfam:IPR000897; HMMPfam:IPR004125; HMMPfam:IPR013822; BlastProDom:IPR000897; Gene3D:IPR004125; Gene3D:IPR013822; HMMPanther:IPR004780; HMMSmart:IPR003593; HMMTigr:IPR004780; ScanRegExp:IPR000897; superfamily:IPR013822 YP_002937394.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_002937395.1 Cytoplasmic, score:8.87; COG1837 Predicted RNA-binding protein (contains KH domain); KEGG:0hypothetical protein; superfamily:IPR009019 YP_002937396.1 Essential for efficient processing of 16S rRNA YP_002937397.1 Cytoplasmic, score:8.87; COG0336 tRNA-(guanine-N1)-methyltransferase; KEGG:K00554 tRNA (guanine-N1)-methyltransferase HMMPfam:IPR002649; BlastProDom:IPR002649; HMMTigr:IPR002649 YP_002937398.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_002937399.1 CytoplasmicMembrane, score:9.49; COG0681 Signal peptidase I; KEGG:K03100 signal peptidase I HMMPfam:IPR011056; Gene3D:IPR011056; HMMPanther:IPR000223; HMMPanther:IPR014037; HMMTigr:IPR000223; ScanRegExp:IPR000223; superfamily:IPR015927 YP_002937400.1 Cytoplasmic, score:8.87; COG1161 Predicted GTPases; KEGG:0ribosomal biogenesis GTPase; HMMPfam:IPR002917; HMMTigr:IPR005289 YP_002937401.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_002937402.1 Cytoplasmic, score:9.98; COG0583 Transcriptional regulator; KEGG:K04761 transcriptional regulator, LysR family; HMMPfam:IPR000847; Gene3D:IPR011991 YP_002937403.1 Unknown cell location YP_002937404.1 Cytoplasmic, score:8.87; COG1199 Rad3-related DNA helicases; KEGG:0putative ATP-dependent DNA-repair helicase HMMPfam:IPR010614; HMMSmart:IPR006554; HMMSmart:IPR006555; HMMSmart:IPR014001 YP_002937405.1 Cytoplasmic, score:9.98; COG0583 Transcriptional regulator; KEGG:K03576 transcriptional regulatory protein, LysR family; HMMPfam:IPR000847; HMMPfam:IPR005119; Gene3D:IPR011991 YP_002937406.1 Cytoplasmic, score:8.87; COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; KEGG:K01952 phosphoribosylformylglycinamidine synthase HMMPfam:IPR010918; HMMTigr:IPR010141 YP_002937407.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate YP_002937408.1 Cytoplasmic, score:8.87; COG1387 Histidinol phosphatase and related hydrolases of the PHP family; KEGG:K04486 histidinol phosphate phosphatase HisJ family HMMPfam:IPR004013; HMMPanther:IPR010140; HMMTigr:IPR010140 YP_002937409.1 Extracellular, score:8.82 YP_002937410.1 Cytoplasmic, score:9.98; COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; KEGG:K00134 glyceraldehyde-3-phosphate dehydrogenase, type I HMMPfam:IPR000173; HMMPanther:IPR000173; HMMTigr:IPR006424; ScanRegExp:IPR000173; ScanRegExp:IPR010916 YP_002937411.1 Cytoplasmic, score:9.65; COG0126 3-phosphoglycerate kinase; KEGG:K00927 phosphoglycerate kinase HMMPfam:IPR001576; Gene3D:IPR015824; Gene3D:IPR015901; HMMPanther:IPR001576; ScanRegExp:IPR015911; superfamily:IPR001576 YP_002937412.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_002937413.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002937414.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_002937415.1 Cytoplasmic, score:8.87; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; KEGG:K00764 amidophosphoribosyltransferase HMMPfam:IPR000583; HMMPfam:IPR000836; HMMPanther:IPR005854; HMMTigr:IPR005854; ScanRegExp:IPR002375 YP_002937416.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_002937417.1 Cytoplasmic, score:9.36; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT; KEGG:K02669 predicted ATPase involved in pili biogenesis, PilT homologs; HMMPfam:IPR001482; BlastProDom:IPR001482; HMMSmart:IPR003593; HMMTigr:IPR006321; ScanRegExp:IPR001482 YP_002937418.1 Unknown cell location YP_002937419.1 Unknown cell location YP_002937420.1 Unknown cell location YP_002937421.1 Unknown cell location YP_002937422.1 CytoplasmicMembrane, score:9.97; COG1459 Type II secretory pathway, component PulF; KEGG:K02653 fimbrial assembly protein PilC; HMMPfam:IPR001992 YP_002937423.1 Unknown cell location; COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_002937424.1 Unknown cell location YP_002937425.1 CytoplasmicMembrane, score:9.75; NOG16909 non supervised orthologous group; HMMPfam:IPR004692; HMMTigr:IPR004692 YP_002937426.1 Cytoplasmic, score:8.87; COG0557 Exoribonuclease R; KEGG:K01147 ribonuclease R HMMPfam:IPR001900; HMMPfam:IPR003029; HMMPfam:IPR013223; Gene3D:IPR012340; HMMPanther:IPR004476; HMMSmart:IPR003029; HMMSmart:IPR011129; HMMTigr:IPR004476; HMMTigr:IPR011805 YP_002937427.1 Cytoplasmic, score:8.87; COG0691 tmRNA-binding protein; KEGG:K03664 SsrA-binding protein; HMMPfam:IPR000037; BlastProDom:IPR000037; Gene3D:IPR000037; HMMTigr:IPR000037; ScanRegExp:IPR000037; superfamily:IPR000037 YP_002937428.1 Unknown cell location YP_002937429.1 CytoplasmicMembrane, score:10.00; COG2233 Xanthine/uracil permeases; KEGG:K03458 uracil permease; HMMPfam:IPR006043; HMMPanther:IPR006042; HMMPanther:IPR006043; HMMTigr:IPR006042 YP_002937430.1 CytoplasmicMembrane, score:9.99; COG0392 Predicted integral membrane protein; KEGG:0hypothetical protein; HMMTigr:IPR005242 YP_002937431.1 CytoplasmicMembrane, score:9.97; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; KEGG:K02488 diguanylate cyclase; HMMPfam:IPR000160; HMMSmart:IPR000160; HMMTigr:IPR000160 YP_002937432.1 CytoplasmicMembrane, score:9.99; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; KEGG:0sulfatase HMMPfam:IPR000917; Gene3D:IPR001952 YP_002937433.1 CytoplasmicMembrane, score:9.99; COG4485 Predicted membrane protein YP_002937434.1 Unknown cell location; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); KEGG:K03545 trigger factor; HMMPfam:IPR001179; HMMPanther:IPR001179 YP_002937435.1 Cytoplasmic, score:8.87; COG0513 Superfamily II DNA and RNA helicases; KEGG:0putative ATP dependent RNA helicase HMMPfam:IPR001650; HMMSmart:IPR001650 YP_002937436.1 Cytoplasmic, score:8.87; COG0824 Predicted thioesterase; KEGG:0conserved hypothetical protein; probable esterase; HMMPfam:IPR006683; HMMTigr:IPR006684 YP_002937437.1 Cytoplasmic, score:8.87; COG0006 Xaa-Pro aminopeptidase; KEGG:K01262 peptidase, M24 family protein HMMPfam:IPR000587; HMMPfam:IPR000994; Gene3D:IPR000994; HMMPanther:IPR000994 YP_002937438.1 Cytoplasmic, score:8.87; COG0749 DNA polymerase I - 3-5 exonuclease and polymerase domains; KEGG:K02335 DNA polymerase I HMMPfam:IPR001098; HMMPfam:IPR002421; HMMSmart:IPR001098; HMMSmart:IPR002421; HMMSmart:IPR008918; HMMTigr:IPR002298; ScanRegExp:IPR001098; superfamily:IPR008918; superfamily:IPR012337 YP_002937439.1 Cytoplasmic, score:8.87; COG0237 Dephospho-CoA kinase; KEGG:K00859 dephospho-CoA kinase HMMPfam:IPR001977; BlastProDom:IPR001977; HMMPanther:IPR001977; HMMTigr:IPR001977 YP_002937440.1 Cytoplasmic, score:8.87; COG0849 Actin-like ATPase involved in cell division; KEGG:K03590 cell division protein FtsA; HMMPfam:IPR003494; ScanRegExp:IPR015590 YP_002937441.1 Cytoplasmic, score:8.87; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; KEGG:K00784 ribonuclease Z HMMPfam:IPR001279 YP_002937442.1 ACT domain-containing protein YP_002937443.1 Cytoplasmic, score:8.87; COG2848 Uncharacterized conserved protein; KEGG:K09157 hypothetical protein; HMMPfam:IPR007841 YP_002937444.1 Cytoplasmic, score:8.87; HMMPfam:IPR010191; superfamily:IPR010191 YP_002937445.1 Catalyzes the formylation of AICAR with 10-formyl-tetrahydrofolate to yield FAICAR and tetrahydrofolate YP_002937446.1 Cytoplasmic, score:8.87; COG3857 ATP-dependent nuclease, subunit B; KEGG:0AddB ScanRegExp:IPR000209 YP_002937447.1 Cytoplasmic, score:8.87; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); KEGG:K03657 DNA helicase II HMMPfam:IPR000212; Gene3D:IPR011604; HMMPanther:IPR000212; HMMTigr:IPR014152 YP_002937448.1 Cytoplasmic, score:8.87 YP_002937449.1 Unknown cell location; COG0760 Parvulin-like peptidyl-prolyl isomerase; HMMPfam:IPR000297 YP_002937450.1 CytoplasmicMembrane, score:9.99; COG0671 Membrane-associated phospholipid phosphatase; HMMPfam:IPR000326; HMMSmart:IPR000326; superfamily:IPR000326 YP_002937451.1 molecular chaperone YP_002937452.1 Unknown cell location YP_002937453.1 Cytoplasmic, score:8.87; COG5496 Predicted thioesterase YP_002937454.1 CytoplasmicMembrane, score:9.99; COG1295 Predicted membrane protein; KEGG:0hypothetical protein; HMMPfam:IPR004664; HMMTigr:IPR004664 YP_002937455.1 Cytoplasmic, score:9.98; COG1045 Serine acetyltransferase; KEGG:K00640 serine acetyltransferase, plasmid HMMPfam:IPR001451; superfamily:IPR011004 YP_002937456.1 Extracellular, score:8.82 YP_002937457.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 RNA-directed DNA polymerase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002937458.1 Unknown cell location YP_002937459.1 Unknown cell location; COG1918 Fe2+ transport system protein A; HMMPfam:IPR007167; superfamily:IPR008988 YP_002937460.1 Cytoplasmic, score:8.87; COG1918 Fe2+ transport system protein A; KEGG:K04758 hypothetical protein; HMMPfam:IPR007167; superfamily:IPR008988 YP_002937461.1 CytoplasmicMembrane, score:10.00; COG0370 Fe2+ transport system protein B; KEGG:K04759 ferrous iron transport protein B; HMMPfam:IPR002917; HMMPfam:IPR011619; HMMPfam:IPR011640; HMMPfam:IPR011642; HMMTigr:IPR003373; HMMTigr:IPR005225 YP_002937462.1 Unknown cell location YP_002937463.1 Cytoplasmic, score:8.87; COG0735 Fe2+/Zn2+ uptake regulation proteins; HMMPfam:IPR002481 YP_002937464.1 Cytoplasmic, score:8.87; NOG13233 non supervised orthologous group YP_002937465.1 Unknown cell location; COG0716 Flavodoxins; HMMPfam:IPR008254; HMMTigr:IPR010087; ScanRegExp:IPR001226 YP_002937466.1 Extracellular, score:8.82 YP_002937467.1 Unknown cell location; COG0582 Integrase YP_002937469.1 Cytoplasmic, score:8.87 YP_002937470.1 CytoplasmicMembrane, score:10.00; COG2211 Na+/melibiose symporter and related transporters; KEGG:K03292 melibiose:sodium symporter; HMMPfam:IPR011701; HMMTigr:IPR001927 YP_002937471.1 Unknown cell location YP_002937472.1 Cytoplasmic, score:8.87 YP_002937473.1 Cytoplasmic, score:8.87; COG3580 Uncharacterized protein conserved in bacteria YP_002937474.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002937475.1 CytoplasmicMembrane, score:9.75; NOG35759 non supervised orthologous group YP_002937476.1 Unknown cell location YP_002937477.1 Cytoplasmic, score:8.87 YP_002937478.1 Cytoplasmic, score:8.87; COG3580 Uncharacterized protein conserved in bacteria; KEGG:0putative putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase HMMPfam:IPR002731; BlastProDom:IPR008275; HMMTigr:IPR008275 YP_002937479.1 Extracellular, score:8.82 YP_002937480.1 CytoplasmicMembrane, score:9.99; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_002937481.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002937482.1 Cytoplasmic, score:8.87; COG1655 Uncharacterized protein conserved in bacteria; KEGG:K09766 hypothetical protein YP_002937483.1 Extracellular, score:8.82 YP_002937484.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 putative reverse transcriptasematurase of intron HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002937485.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_002937486.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate YP_002937487.1 Cytoplasmic, score:8.87; COG0456 Acetyltransferases; KEGG:K03826 hypothetical protein HMMPfam:IPR000182 YP_002937488.1 Cytoplasmic, score:8.87; COG0548 Acetylglutamate kinase; KEGG:K00930 acetylglutamate kinase HMMPfam:IPR001048; Gene3D:IPR001048; HMMPIR:IPR011148; HMMTigr:IPR004662; superfamily:IPR001048 YP_002937489.1 Cytoplasmic, score:8.87; COG4992 Ornithine/acetylornithine aminotransferase; KEGG:K00818 acetylornithine aminotransferase HMMPfam:IPR005814; Gene3D:IPR015421; HMMPanther:IPR004636; HMMPanther:IPR005814; HMMTigr:IPR004636; ScanRegExp:IPR005814; superfamily:IPR015424 YP_002937490.1 CytoplasmicMembrane, score:9.83; COG1555 DNA uptake protein and related DNA-binding proteins; KEGG:K02237 unspecific high-affinity DNA-binding protein; HMMPfam:IPR000445; HMMTigr:IPR004509; superfamily:IPR010994 YP_002937491.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07659 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002937492.1 CytoplasmicMembrane, score:9.49; COG0642 Signal transduction histidine kinase; KEGG:K07652 signal transduction histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; ScanRegExp:IPR006162; superfamily:IPR003594; superfamily:IPR009082 YP_002937493.1 Cytoplasmic, score:8.87; NOG21949 non supervised orthologous group YP_002937494.1 CytoplasmicMembrane, score:9.99; COG0658 Predicted membrane metal-binding protein; KEGG:K02238 putative integral membrane protein; HMMPfam:IPR004477; HMMTigr:IPR004477; HMMTigr:IPR004797 YP_002937495.1 Cytoplasmic, score:8.87; COG1466 DNA polymerase III, delta subunit; KEGG:K02340 DNA polymerase III, delta subunit HMMPfam:IPR010372; HMMTigr:IPR005790; superfamily:IPR008921 YP_002937496.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002937497.1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination YP_002937498.1 Cytoplasmic, score:8.87; NOG13213 non supervised orthologous group; KEGG:K06385 stage II sporulation protein P; HMMPfam:IPR010897; HMMTigr:IPR010897 YP_002937499.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002937500.1 Cytoplasmic, score:9.98; COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; KEGG:K02495 oxygen-independent coproporphyrinogen III oxidase HMMPfam:IPR007197; HMMPfam:IPR010723; Gene3D:IPR013785; HMMSmart:IPR006638; HMMTigr:IPR004559 YP_002937501.1 Cytoplasmic, score:8.87; COG1354 Uncharacterized conserved protein; KEGG:K05896 segregation and condensation protein A; HMMPfam:IPR003768 YP_002937502.1 Cytoplasmic, score:8.87; COG1386 Predicted transcriptional regulator containing the HTH domain; KEGG:K06024 putative transcriptional regulator; HMMPfam:IPR005234; Gene3D:IPR011991; HMMTigr:IPR005234 YP_002937503.1 Unknown cell location; COG1686 D-alanyl-D-alanine carboxypeptidase; KEGG:K01286 serine-type D-Ala-D-Ala carboxypeptidase HMMPfam:IPR001967; superfamily:IPR012338 YP_002937504.1 Cytoplasmic, score:8.87; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); KEGG:K01964 propionyl-CoA carboxylase HMMPfam:IPR000022 YP_002937505.1 Unknown cell location; HMMPfam:IPR005899; HMMTigr:IPR005899 YP_002937506.1 Unknown cell location; COG5016 Pyruvate/oxaloacetate carboxyltransferase; KEGG:K01571 pyruvate carboxylase subunit B HMMPfam:IPR000089; ScanRegExp:IPR001882; superfamily:IPR011053 YP_002937507.1 CytoplasmicMembrane, score:10.00; COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; KEGG:K01615 sodium ion-translocating decarboxylase, beta subunit HMMPfam:IPR005661; HMMPIR:IPR005661; HMMTigr:IPR005661 YP_002937508.1 Cytoplasmic, score:8.87; COG5016 Pyruvate/oxaloacetate carboxyltransferase; KEGG:K01570 oxaloacetate decarboxylase HMMPfam:IPR000891; HMMPfam:IPR003379; Gene3D:IPR013785 YP_002937509.1 Extracellular, score:8.82 YP_002937510.1 Unknown cell location YP_002937511.1 Extracellular, score:8.82 YP_002937512.1 Cytoplasmic, score:8.87; COG1737 Transcriptional regulators; KEGG:K00885 N-acetylmannosamine kinase HMMPfam:IPR000281; HMMPfam:IPR001347 YP_002937513.1 Unknown cell location; COG2081 Predicted flavoproteins; KEGG:0NAD(FAD)-utilizing dehydrogenase; HMMPfam:IPR004792; BlastProDom:IPR004792; HMMTigr:IPR004792; superfamily:IPR010979 YP_002937514.1 Cytoplasmic, score:8.87; COG0283 Cytidylate kinase; KEGG:K00945 cytidylate kinase HMMPfam:IPR000623; HMMPfam:IPR011994; BlastProDom:IPR011769; HMMPanther:IPR003136; HMMTigr:IPR003136 YP_002937515.1 Cytoplasmic, score:8.87; COG0761 Penicillin tolerance protein; KEGG:K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase HMMPfam:IPR003451; HMMTigr:IPR003451 YP_002937516.1 Cytoplasmic, score:9.98; COG0761 Penicillin tolerance protein; KEGG:K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein HMMPfam:IPR003029; Gene3D:IPR012340; HMMSmart:IPR003029 YP_002937517.1 Cytoplasmic, score:9.98; COG1352 Methylase of chemotaxis methyl-accepting proteins; KEGG:K00575 protein-glutamate O-methyltransferase HMMPfam:IPR000780; HMMSmart:IPR000780; superfamily:IPR000780 YP_002937518.1 Cytoplasmic, score:8.87; COG3359 Predicted exonuclease; KEGG:K07502 possible elongation subunit of DNA-dependent DNA polymerase; superfamily:IPR012337 YP_002937519.1 Cytoplasmic, score:8.87; COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC; KEGG:K03615 rnfC/nqrF; HMMPfam:IPR001450; HMMPfam:IPR011538; HMMTigr:IPR010208; ScanRegExp:IPR001450; superfamily:IPR009051; superfamily:IPR011053 YP_002937520.1 CytoplasmicMembrane, score:9.99; COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD; KEGG:K03614 NADH:ubiquinone oxidoreductase, Na translocating, B subunit; HMMPfam:IPR004338; HMMTigr:IPR011303 YP_002937521.1 Unknown cell location; COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG; KEGG:K03612 rnfG/nqrC; HMMPfam:IPR007329; HMMTigr:IPR010209 YP_002937522.1 CytoplasmicMembrane, score:10.00; COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE; KEGG:K03613 rnfE/nqrD; HMMPfam:IPR003667; HMMTigr:IPR010968 YP_002937523.1 CytoplasmicMembrane, score:10.00; COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA; KEGG:K03617 Na(+)-translocating NADH-quinone reductase subunit D; HMMPfam:IPR003667; HMMTigr:IPR011293 YP_002937524.1 Cytoplasmic, score:8.87; COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB; KEGG:K03616 ferredoxin; HMMPfam:IPR001450; HMMPfam:IPR007202; HMMTigr:IPR010207; ScanRegExp:IPR001450 YP_002937525.1 Unknown cell location; COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; KEGG:K03734 membrane-associated lipoprotein involved in thiamine biosynthesis; HMMPfam:IPR003374 YP_002937526.1 Cytoplasmic, score:9.98; COG0263 Glutamate 5-kinase; KEGG:K00931 glutamate 5-kinase HMMPfam:IPR001048; Gene3D:IPR001048; HMMPIR:IPR011529; HMMTigr:IPR005715; ScanRegExp:IPR001057; superfamily:IPR001048 YP_002937527.1 Unknown cell location; COG4224 Uncharacterized protein conserved in bacteria; HMMPfam:IPR009242 YP_002937528.1 Cytoplasmic, score:8.87; COG0212 5-formyltetrahydrofolate cyclo-ligase; KEGG:K01934 putative ligase HMMPfam:IPR002698; Gene3D:IPR002698; HMMPanther:IPR002698; HMMTigr:IPR002698 YP_002937529.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_002937530.1 Cytoplasmic, score:8.87; COG0621 2-methylthioadenine synthetase; KEGG:K08070 tRNA-i(6)A37 thiotransferase enzyme MiaB HMMPfam:IPR002792; HMMPfam:IPR007197; HMMPfam:IPR013848; Gene3D:IPR013785; HMMPanther:IPR005839; HMMSmart:IPR006638; HMMTigr:IPR005839; HMMTigr:IPR006463; ScanRegExp:IPR005839 YP_002937531.1 Unknown cell location; COG5341 Uncharacterized protein conserved in bacteria; HMMPfam:IPR010739 YP_002937532.1 CytoplasmicMembrane, score:9.99; COG4769 Predicted membrane protein; KEGG:K00805 heptaprenyl diphosphate synthase component I HMMPfam:IPR010898; HMMPIR:IPR014535 YP_002937533.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_002937534.1 Cytoplasmic, score:8.87; COG2255 Holliday junction resolvasome, helicase subunit; KEGG:K03551 Holliday junction DNA helicase B; HMMPfam:IPR008824 YP_002937535.1 Cytoplasmic, score:8.87; COG2255 Holliday junction resolvasome, helicase subunit; KEGG:0Holliday junction DNA helicase B HMMPfam:IPR003959; HMMPfam:IPR008823; Gene3D:IPR011991; HMMTigr:IPR004605 YP_002937536.1 Cytoplasmic, score:8.87; COG5022 Myosin heavy chain YP_002937537.1 Cytoplasmic, score:8.87; COG0826 Collagenase and related proteases; KEGG:0peptidase, U32 family HMMPfam:IPR001539; BlastProDom:IPR001539 YP_002937538.1 CytoplasmicMembrane, score:10.00; COG0772 Bacterial cell division membrane protein; KEGG:K03588 cell cycle protein; HMMPfam:IPR001182; ScanRegExp:IPR006162 YP_002937539.1 CytoplasmicMembrane, score:9.82; COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG:K05364 peptidoglycan glycosyltransferase HMMPfam:IPR001460; superfamily:IPR005311; superfamily:IPR012338 YP_002937540.1 Unknown cell location; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:K03574 AP4A hydrolase HMMPfam:IPR000086; Gene3D:IPR000086; ScanRegExp:IPR000086; superfamily:IPR015797 YP_002937541.1 Unknown cell location YP_002937542.1 Unknown cell location; KOG1181 FOG: Low-complexity YP_002937543.1 Unknown cell location YP_002937544.1 Unknown cell location; COG3874 Uncharacterized conserved protein YP_002937545.1 Cytoplasmic, score:8.87 YP_002937546.1 Cytoplasmic, score:8.87; COG1302 Uncharacterized protein conserved in bacteria; HMMPfam:IPR005531 YP_002937547.1 Cytoplasmic, score:8.87; COG1461 Predicted kinase related to dihydroxyacetone kinase; KEGG:0DegV protein; HMMPfam:IPR004007 YP_002937548.1 Cytoplasmic, score:8.87; COG1200 RecG-like helicase; KEGG:K03655 ATP-dependent DNA helicase RecG HMMPfam:IPR001650; HMMPfam:IPR011545; HMMSmart:IPR001650; HMMSmart:IPR014001 YP_002937549.1 Cytoplasmic, score:8.87; COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; HMMPfam:IPR008532; HMMPfam:IPR008616; superfamily:IPR010979 YP_002937550.1 Cytoplasmic, score:8.87; COG1561 Uncharacterized stress-induced protein; HMMPfam:IPR013527; HMMPfam:IPR013551; HMMTigr:IPR005229 YP_002937551.1 Cytoplasmic, score:8.87; COG0194 Guanylate kinase; KEGG:K00942 guanylate kinase HMMPfam:IPR008144; HMMSmart:IPR008145; ScanRegExp:IPR008144 YP_002937552.1 Cytoplasmic, score:8.87; COG1758 DNA-directed RNA polymerase, subunit K/omega; HMMPfam:IPR006110; HMMTigr:IPR003716; superfamily:IPR006110 YP_002937553.1 Cytoplasmic, score:8.87; COG0621 2-methylthioadenine synthetase; KEGG:K08070 MiaB-like tRNA modifying enzyme YliG HMMPfam:IPR007197; HMMPfam:IPR013848; Gene3D:IPR013785; HMMPanther:IPR005839; HMMSmart:IPR006638; HMMTigr:IPR005839; HMMTigr:IPR005840; ScanRegExp:IPR005839 YP_002937554.1 CytoplasmicMembrane, score:9.99; COG0558 Phosphatidylglycerophosphate synthase; KEGG:K00995 phosphatidylglycerophosphate synthase HMMPfam:IPR000462; HMMTigr:IPR004570; ScanRegExp:IPR000462 YP_002937555.1 Cytoplasmic, score:8.87; COG0742 N6-adenine-specific methylase; KEGG:K00571 site-specific DNA-methyltransferase (adenine-specific) HMMPfam:IPR004398; HMMTigr:IPR004398; ScanRegExp:IPR002052 YP_002937556.1 Unknown cell location; COG0669 Phosphopantetheine adenylyltransferase; KEGG:K02318 pantetheine-phosphate adenylyltransferase HMMPfam:IPR004820; Gene3D:IPR014729; HMMTigr:IPR001980; HMMTigr:IPR004821 YP_002937557.1 Cytoplasmic, score:8.87; NOG13209 non supervised orthologous group YP_002937558.1 CytoplasmicMembrane, score:9.99; COG3314 Uncharacterized protein conserved in bacteria YP_002937559.1 Cytoplasmic, score:8.87; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; KEGG:K06183 16S pseudouridylate synthase HMMPfam:IPR002942; HMMPfam:IPR006145; HMMSmart:IPR002942; HMMTigr:IPR000748; ScanRegExp:IPR000748 YP_002937560.1 Cytoplasmic, score:8.87; COG1032 Fe-S oxidoreductase; KEGG:0Fe-S oxidoreductase HMMPfam:IPR007197; HMMPfam:IPR013704; HMMSmart:IPR006638 YP_002937561.1 Cytoplasmic, score:8.87; COG0564 Pseudouridylate synthases, 23S RNA-specific; KEGG:K06179 ribosomal large subunit pseudouridine synthase D HMMPfam:IPR002942; HMMPfam:IPR006145; BlastProDom:IPR006145; HMMSmart:IPR002942; ScanRegExp:IPR006224 YP_002937562.1 Cytoplasmic, score:8.87; COG3331 Penicillin-binding protein-related factor A, putative recombinase; KEGG:K03700 Holliday junction-specific endonuclease; HMMPfam:IPR004612 YP_002937563.1 Cytoplasmic, score:9.98; COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis; KEGG:K01891 histidine--tRNA ligase HMMPfam:IPR002314; HMMPIR:IPR004516; HMMPanther:IPR015805 YP_002937564.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_002937565.1 Cytoplasmic, score:8.87; COG0141 Histidinol dehydrogenase; KEGG:K00013 histidinol dehydrogenase HMMPfam:IPR001692; BlastProDom:IPR001692; FPrintScan:IPR001692; HMMPanther:IPR012131; HMMTigr:IPR001692; ScanRegExp:IPR001692 YP_002937566.1 Cytoplasmic, score:8.87; COG0131 Imidazoleglycerol-phosphate dehydratase; KEGG:K01693 imidazoleglycerol-phosphate dehydratase HMMPfam:IPR000807; BlastProDom:IPR000807; HMMPanther:IPR000807; ScanRegExp:IPR000807 YP_002937567.1 Cytoplasmic, score:9.98; COG0139 Phosphoribosyl-AMP cyclohydrolase; KEGG:K02500 imidazole glycerol phosphate synthase subunit HisF, putative HMMPfam:IPR002496; HMMPfam:IPR006062; HMMPfam:IPR008179; BlastProDom:IPR002496; BlastProDom:IPR008179; Gene3D:IPR013785; superfamily:IPR011060 YP_002937568.1 Cytoplasmic, score:8.87; COG1032 Fe-S oxidoreductase; KEGG:0Fe-S oxidoreductase HMMPfam:IPR007197; HMMPanther:IPR005839; HMMSmart:IPR006638 YP_002937569.1 Cytoplasmic, score:8.87; COG5011 Uncharacterized protein conserved in bacteria; KEGG:0Fe-S oxidoreductase YP_002937570.1 Cytoplasmic, score:9.65; COG1530 Ribonucleases G and E; KEGG:0ribonuclease G and E Gene3D:IPR012340 YP_002937571.1 Unknown cell location; COG0261 Ribosomal protein L21; KEGG:K02888 50S ribosomal protein L21; HMMPfam:IPR001787; BlastProDom:IPR001787; HMMPanther:IPR001787; HMMTigr:IPR001787; ScanRegExp:IPR001787 YP_002937572.1 Unknown cell location; COG2868 Predicted ribosomal protein; KEGG:K07584 hypothetical protein; HMMPfam:IPR007422 YP_002937573.1 involved in the peptidyltransferase reaction during translation YP_002937574.1 Cytoplasmic, score:8.87; COG0536 Predicted GTPase; KEGG:K03979 GTP1/OBG subdomain containing protein; HMMPfam:IPR002917; HMMPfam:IPR006169; HMMPfam:IPR015349; FPrintScan:IPR006073; Gene3D:IPR006169; HMMPanther:IPR014100; HMMTigr:IPR005225; HMMTigr:IPR014100; ScanRegExp:IPR006074; superfamily:IPR006169 YP_002937575.1 Cytoplasmic, score:8.87; COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; KEGG:K07574 hypothetical protein; HMMPfam:IPR001890; BlastProDom:IPR001890; HMMTigr:IPR001890 YP_002937576.1 Cytoplasmic, score:8.87; COG1057 Nicotinic acid mononucleotide adenylyltransferase; KEGG:K00969 nicotinate (nicotinamide) nucleotide adenylyltransferase HMMPfam:IPR004820; Gene3D:IPR014729; HMMPanther:IPR005248; HMMTigr:IPR004821; HMMTigr:IPR005248 YP_002937577.1 Cytoplasmic, score:8.87; COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism; KEGG:K00969 putative nicotinate-nucleotide adenylyltransferase HMMPfam:IPR006674; HMMSmart:IPR003607; HMMTigr:IPR005249; HMMTigr:IPR006675 YP_002937578.1 Cytoplasmic, score:8.87; COG0799 Uncharacterized homolog of plant Iojap protein; KEGG:K09710 iojap-related protein; HMMPfam:IPR004394; HMMPanther:IPR004394; HMMTigr:IPR004394 YP_002937579.1 Cytoplasmic, score:8.87; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); KEGG:K01356 transcriptional repressor, LexA family HMMPfam:IPR006199; HMMPfam:IPR011056; FPrintScan:IPR006197; Gene3D:IPR011056; Gene3D:IPR011991; HMMTigr:IPR006200; superfamily:IPR015927 YP_002937580.1 Unknown cell location; COG1388 FOG: LysM repeat; HMMPfam:IPR002482 YP_002937581.1 Cytoplasmic, score:8.87; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG:K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative HMMPfam:IPR002123; HMMSmart:IPR002123 YP_002937582.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K03733 phage integrase family protein; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002937583.1 Cytoplasmic, score:8.87; COG0566 rRNA methylases; KEGG:0hypothetical protein HMMPfam:IPR001537; BlastProDom:IPR001537 YP_002937584.1 Unknown cell location YP_002937585.1 Cytoplasmic, score:8.87; COG5577 Spore coat protein; Gene3D:IPR012347; superfamily:IPR009078 YP_002937586.1 Unknown cell location; COG2013 Uncharacterized conserved protein; HMMPfam:IPR002838; HMMTigr:IPR002838 YP_002937587.1 Cytoplasmic, score:8.87; COG1490 D-Tyr-tRNAtyr deacylase; KEGG:K07560 D-tyrosyl-tRNA deacylase HMMPfam:IPR003732; BlastProDom:IPR003732; Gene3D:IPR003732; HMMPanther:IPR003732; HMMTigr:IPR003732; ScanRegExp:IPR000581; superfamily:IPR003732 YP_002937588.1 Unknown cell location; HMMPfam:IPR000160 YP_002937589.1 Cytoplasmic, score:8.87; COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; KEGG:0predicted ATPase of the PP-loop superfamily implicated in cell cycle control HMMPfam:IPR011063; Gene3D:IPR014729; HMMPIR:IPR012089 YP_002937590.1 CytoplasmicMembrane, score:9.49; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 hypothetical protein; HMMPfam:IPR003660; HMMPfam:IPR004089; HMMSmart:IPR004089 YP_002937591.1 contains RuvC-like nuclease and HNH-nuclease domains; Unknown cell location; COG3513 Uncharacterized protein conserved in bacteria; KEGG:K09952 CRISPR-system related protein, contains RuvC-like nuclease and HNH-nuclease domains; HMMPfam:IPR002711; HMMTigr:IPR010145; superfamily:IPR012337 YP_002937592.1 Cytoplasmic, score:8.87; COG1518 Uncharacterized protein predicted to be involved in DNA repair; BlastProDom:IPR002729; HMMTigr:IPR002729 YP_002937593.1 Cytoplasmic, score:8.87; COG3512 Uncharacterized protein conserved in bacteria; KEGG:K09951 hypothetical protein; HMMTigr:IPR003799 YP_002937594.1 Cytoplasmic, score:8.87 YP_002937595.1 Unknown cell location; COG4443 Uncharacterized protein conserved in bacteria YP_002937596.1 Cytoplasmic, score:8.87; COG0778 Nitroreductase; KEGG:0dihydropteridine reductase HMMPfam:IPR000415 YP_002937597.1 Extracellular, score:8.82 YP_002937598.1 Cytoplasmic, score:8.87; COG2378 Predicted transcriptional regulator YP_002937599.1 CytoplasmicMembrane, score:9.49; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; KEGG:K06158 YdiF; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002937600.1 CytoplasmicMembrane, score:9.99; COG0679 Predicted permeases; KEGG:0hypothetical protein; HMMPfam:IPR004776 YP_002937601.1 Unknown cell location; COG0679 Predicted permeases; HMMPfam:IPR004776 YP_002937602.1 Cytoplasmic, score:8.87; COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; KEGG:K00016 L-lactate dehydrogenase HMMPfam:IPR000262; BlastProDom:IPR000652; Gene3D:IPR013785; HMMPIR:IPR012133 YP_002937603.1 Cytoplasmic, score:8.87; superfamily:IPR009061 YP_002937604.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_002937606.1 Unknown cell location YP_002937607.1 Cytoplasmic, score:8.87 YP_002937608.1 Cytoplasmic, score:8.87; NOG14451 non supervised orthologous group; KEGG:K00945 cytidylate kinase YP_002937609.1 Cytoplasmic, score:8.87; COG0564 Pseudouridylate synthases, 23S RNA-specific; KEGG:K01185 pseudouridine synthase, RluA family HMMPfam:IPR002942; HMMPfam:IPR006145; BlastProDom:IPR006145; HMMSmart:IPR002942; HMMTigr:IPR006225 YP_002937610.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_002937611.1 Cytoplasmic, score:8.87; COG1799 Uncharacterized protein conserved in bacteria; KEGG:K09772 hypothetical protein; HMMPfam:IPR007561 YP_002937612.1 Cytoplasmic, score:8.87; COG0325 Predicted enzyme with a TIM-barrel fold; KEGG:0hypothetical protein; HMMPfam:IPR001608; HMMPanther:IPR011078; HMMTigr:IPR011078; ScanRegExp:IPR011078 YP_002937613.1 Unknown cell location YP_002937614.1 Cytoplasmic, score:8.87 YP_002937615.1 Unknown cell location; COG1686 D-alanyl-D-alanine carboxypeptidase; KEGG:K01286 serine-type D-Ala-D-Ala carboxypeptidase HMMPfam:IPR001967; FPrintScan:IPR001967; superfamily:IPR012338 YP_002937616.1 Cytoplasmic, score:8.87; COG1803 Methylglyoxal synthase; KEGG:K01734 methylglyoxal synthase HMMPfam:IPR011607; BlastProDom:IPR004363; HMMPIR:IPR004363; HMMTigr:IPR004363 YP_002937617.1 CytoplasmicMembrane, score:10.00; COG0772 Bacterial cell division membrane protein; KEGG:K03588 similar to cell-division protein RodA and FtsW; HMMPfam:IPR001182 YP_002937618.1 Cytoplasmic, score:8.87; HMMPfam:IPR005527 YP_002937619.1 Cytoplasmic, score:8.87; COG2894 Septum formation inhibitor-activating ATPase; KEGG:K03609 septum site-determining protein MinD; HMMPfam:IPR002586; HMMTigr:IPR010223 YP_002937620.1 CytoplasmicMembrane, score:9.82; COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG:K05364 peptidoglycan glycosyltransferase HMMPfam:IPR001460; HMMPfam:IPR005311; ScanRegExp:IPR006061; superfamily:IPR005311; superfamily:IPR012338 YP_002937621.1 CytoplasmicMembrane, score:9.99; NOG16883 non supervised orthologous group YP_002937622.1 Unknown cell location; COG1792 Cell shape-determining protein; KEGG:K03570 rod shape-determining protein; HMMPfam:IPR007221; HMMTigr:IPR005223 YP_002937623.1 functions in MreBCD complex in some organisms YP_002937624.1 Cytoplasmic, score:8.87; COG2003 DNA repair proteins; KEGG:K03630 DNA repair protein RadC; HMMPfam:IPR000445; HMMPfam:IPR001405; BlastProDom:IPR001405; HMMTigr:IPR001405; ScanRegExp:IPR001405; superfamily:IPR010994 YP_002937625.1 Cytoplasmic, score:8.87; COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance; KEGG:K01758 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme HMMPfam:IPR009651; Gene3D:IPR015421; superfamily:IPR015424 YP_002937626.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_002937627.1 Cytoplasmic, score:8.87; COG0323 DNA mismatch repair enzyme (predicted ATPase); KEGG:K03572 DNA mismatch repair enzyme (predicted ATPase); HMMPfam:IPR003594; HMMPfam:IPR013507; HMMPfam:IPR014790; Gene3D:IPR003594; HMMPanther:IPR002099; HMMTigr:IPR014763; ScanRegExp:IPR014762; superfamily:IPR003594 YP_002937628.1 This protein performs the mismatch recognition step during the DNA repair process YP_002937629.1 Cytoplasmic, score:8.87; COG2509 Uncharacterized FAD-dependent dehydrogenases; KEGG:0uncharacterized FAD-dependent dehydrogenase; HMMPfam:IPR002922 YP_002937630.1 Cytoplasmic, score:8.87; COG2081 Predicted flavoproteins; KEGG:0predicted flavoprotein, YhiN family; HMMPfam:IPR004792; BlastProDom:IPR004792 YP_002937631.1 Unknown cell location YP_002937632.1 CytoplasmicMembrane, score:9.99; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; KEGG:K06409 stage V sporulation protein B, putative; HMMPfam:IPR002797 YP_002937633.1 Unknown cell location YP_002937634.1 Cytoplasmic, score:8.87; COG0319 Predicted metal-dependent hydrolase; KEGG:0hypothetical protein; HMMPfam:IPR002036; BlastProDom:IPR002036; HMMTigr:IPR002036; ScanRegExp:IPR002036 YP_002937635.1 CytoplasmicMembrane, score:7.63; COG1480 Predicted membrane-associated HD superfamily hydrolase; HMMTigr:IPR006675 YP_002937636.1 Cytoplasmic, score:9.98; COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase; KEGG:K06217 phosphate starvation-inducible protein PhoH, predicted ATPase; HMMPfam:IPR003714 YP_002937637.1 Cytoplasmic, score:8.87; NOG07866 non supervised orthologous group YP_002937638.1 Unknown cell location; NOG13846 non supervised orthologous group; HMMPfam:IPR009877 YP_002937639.1 Cytoplasmic, score:8.87; COG1576 Uncharacterized conserved protein; KEGG:K00783 hypothetical protein; HMMPfam:IPR003742; HMMTigr:IPR003742; ScanRegExp:IPR000408 YP_002937640.1 CytoplasmicMembrane, score:9.75 YP_002937641.1 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine YP_002937642.1 Cytoplasmic, score:8.87; COG2176 DNA polymerase III, alpha subunit (gram-positive type); KEGG:K03763 DNA polymerase III, alpha subunit HMMPfam:IPR004013; HMMPfam:IPR004365; HMMPfam:IPR011708; HMMPfam:IPR013520; HMMSmart:IPR003141; HMMSmart:IPR006055; HMMTigr:IPR006054; HMMTigr:IPR006308; ScanRegExp:IPR002048; superfamily:IPR012337 YP_002937643.1 Cytoplasmic, score:8.87; COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; KEGG:K03526 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase HMMPfam:IPR004588; HMMTigr:IPR004588; superfamily:IPR011005 YP_002937644.1 CytoplasmicMembrane, score:10.00; COG0750 Predicted membrane-associated Zn-dependent proteases 1; KEGG:0predicted membrane-associated Zn-dependent protease HMMPfam:IPR008915; HMMSmart:IPR001478; HMMTigr:IPR004387; ScanRegExp:IPR006025; superfamily:IPR001478 YP_002937645.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_002937646.1 CytoplasmicMembrane, score:10.00; COG0575 CDP-diglyceride synthetase; KEGG:K00981 CDP-diglyceride synthetase HMMPfam:IPR000374; ScanRegExp:IPR000374 YP_002937647.1 Unknown cell location; COG0020 Undecaprenyl pyrophosphate synthase; KEGG:K00806 undecaprenyl diphosphate synthase HMMPfam:IPR001441; BlastProDom:IPR001441; Gene3D:IPR001441; HMMPanther:IPR001441; HMMTigr:IPR001441; ScanRegExp:IPR001441; superfamily:IPR001441 YP_002937648.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002937649.1 Cytoplasmic, score:8.87; COG0528 Uridylate kinase; KEGG:0uridylate kinase HMMPfam:IPR001048; Gene3D:IPR001048; HMMPIR:IPR011817; HMMTigr:IPR015963; superfamily:IPR001048 YP_002937650.1 Unknown cell location; COG1664 Integral membrane protein CcmA involved in cell shape determination; HMMPfam:IPR007607 YP_002937651.1 Cytoplasmic, score:8.87; COG0726 Predicted xylanase/chitin deacetylase; KEGG:0peptidoglycan N-acetylglucosamine deacetylase HMMPfam:IPR002509; superfamily:IPR011330 YP_002937652.1 Cytoplasmic, score:9.98; COG0264 Translation elongation factor Ts; KEGG:K02357 elongation factor Ts; HMMPfam:IPR000449; HMMPfam:IPR014039; Gene3D:IPR014039; HMMPanther:IPR001816; HMMTigr:IPR001816; ScanRegExp:IPR001816; superfamily:IPR009060; superfamily:IPR014039 YP_002937653.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002937654.1 Unknown cell location; NOG17338 non supervised orthologous group YP_002937655.1 Cytoplasmic, score:8.87 YP_002937656.1 Cytoplasmic, score:9.98; COG1191 DNA-directed RNA polymerase specialized sigma subunit; KEGG:K01613 RNA polymerase, sigma 28 subunit, FliA/WhiG HMMPfam:IPR007627; HMMPfam:IPR007630; FPrintScan:IPR000943; Gene3D:IPR011991; HMMTigr:IPR012845; HMMTigr:IPR014284; ScanRegExp:IPR000943; superfamily:IPR013324; superfamily:IPR013325 YP_002937657.1 Unknown cell location YP_002937658.1 stimulates methylation of MCP proteins; Unknown cell location; COG1871 Chemotaxis protein; stimulates methylation of MCP proteins; KEGG:K03411 chemotaxis protein; stimulates methylation of MCP proteins; HMMPfam:IPR005659; ScanRegExp:IPR015590 YP_002937659.1 Unknown cell location; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation; KEGG:K03410 chemotaxis protein CheC, inhibitor of MCP methylation; HMMPfam:IPR007597 YP_002937660.1 Cytoplasmic, score:9.98; COG0835 Chemotaxis signal transduction protein; KEGG:K03408 putative CheW protein; HMMPfam:IPR002545; HMMSmart:IPR002545; superfamily:IPR002545 YP_002937661.1 Cytoplasmic, score:9.98; COG0643 Chemotaxis protein histidine kinase and related kinases; KEGG:K03407 putative CheA signal transduction histidine kinases HMMPfam:IPR002545; HMMPfam:IPR003594; HMMPfam:IPR004105; HMMPfam:IPR008207; HMMPfam:IPR010808; BlastProDom:IPR008208; FPrintScan:IPR004358; Gene3D:IPR003594; HMMSmart:IPR002545; HMMSmart:IPR003594; HMMSmart:IPR008207; superfamily:IPR002545; superfamily:IPR003594; superfamily:IPR008207; superfamily:IPR009082 YP_002937662.1 Cytoplasmic, score:9.65; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; KEGG:0response regulator receiver modulated CheB methylesterase HMMPfam:IPR000673; HMMPfam:IPR001789; BlastProDom:IPR000673; BlastProDom:IPR001789; Gene3D:IPR000673; HMMPIR:IPR008248; HMMSmart:IPR001789; superfamily:IPR000673; superfamily:IPR011006 YP_002937663.1 Cytoplasmic, score:8.87; NOG19639 non supervised orthologous group; HMMPfam:IPR009875 YP_002937664.1 Cytoplasmic, score:8.87; COG0455 ATPases involved in chromosome partitioning; KEGG:K04562 cobyrinic acid a,c-diamide synthase; HMMPfam:IPR002586 YP_002937665.1 Unknown cell location; COG1419 Flagellar GTP-binding protein; KEGG:K02404 GTP-binding signal recognition particle SRP54, G-domain; HMMPfam:IPR000897; BlastProDom:IPR000897; HMMSmart:IPR003593 YP_002937666.1 CytoplasmicMembrane, score:10.00; COG1298 Flagellar biosynthesis pathway, component FlhA; KEGG:K02400 flagellar biosynthesis protein A; HMMPfam:IPR001712; FPrintScan:IPR001712; HMMTigr:IPR006301 YP_002937667.1 CytoplasmicMembrane, score:7.80; COG1377 Flagellar biosynthesis pathway, component FlhB; KEGG:K02401 flagellar biosynthesis/type III secretory pathway protein; HMMPfam:IPR006135; FPrintScan:IPR006135; HMMTigr:IPR006136 YP_002937668.1 CytoplasmicMembrane, score:9.99; COG1684 Flagellar biosynthesis pathway, component FliR; KEGG:K02421 flagellar biosynthesis protein FliR; HMMPfam:IPR002010; FPrintScan:IPR002010; HMMTigr:IPR006303 YP_002937669.1 Unknown cell location; COG1987 Flagellar biosynthesis pathway, component FliQ; KEGG:K02420 hypothetical protein; HMMPfam:IPR002191; FPrintScan:IPR002191; HMMTigr:IPR006305 YP_002937670.1 CytoplasmicMembrane, score:10.00; COG1338 Flagellar biosynthesis pathway, component FliP; KEGG:K01046 flagellar biosynthetic protein FliP HMMPfam:IPR005838; BlastProDom:IPR005838; FPrintScan:IPR005837; FPrintScan:IPR005838; HMMTigr:IPR005837; ScanRegExp:IPR005838 YP_002937671.1 Unknown cell location YP_002937672.1 Unknown cell location; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation; KEGG:K02417 flagellar motor switch protein; HMMPfam:IPR001543; HMMPfam:IPR007597; BlastProDom:IPR001543; FPrintScan:IPR001172; HMMTigr:IPR012826 YP_002937673.1 Cytoplasmic, score:8.87; COG1868 Flagellar motor switch protein; KEGG:K02416 flagellar motor switch protein FliM; HMMPfam:IPR001543; HMMPfam:IPR001689; BlastProDom:IPR001543; FPrintScan:IPR001689; HMMTigr:IPR001689 YP_002937674.1 Unknown cell location YP_002937675.1 Unknown cell location; COG1360 Flagellar motor protein; KEGG:K02557 hypothetical protein; HMMPfam:IPR006665; BlastProDom:IPR006665; Gene3D:IPR006665; superfamily:IPR006665 YP_002937676.1 CytoplasmicMembrane, score:10.00; COG1291 Flagellar motor component; KEGG:K02556 motility protein A; HMMPfam:IPR002898; ScanRegExp:IPR000540; ScanRegExp:IPR001412 YP_002937677.1 Unknown cell location; COG1749 Flagellar hook protein FlgE; KEGG:K02390 flagellar hook protein; HMMPfam:IPR001444; HMMPfam:IPR010930; ScanRegExp:IPR001444 YP_002937678.1 Cytoplasmic, score:9.97; NOG18661 non supervised orthologous group; HMMTigr:IPR013367; ScanRegExp:IPR000843 YP_002937679.1 Unknown cell location; COG1843 Flagellar hook capping protein; KEGG:K02389 flagellar hook capping protein; HMMPfam:IPR005648 YP_002937680.1 Cellwall, score:9.17; COG3144 Flagellar hook-length control protein; HMMPfam:IPR001635 YP_002937681.1 Unknown cell location; COG3334 Uncharacterized conserved protein YP_002937682.1 Unknown cell location; NOG18444 non supervised orthologous group; HMMTigr:IPR012823 YP_002937683.1 Cytoplasmic, score:8.87; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; KEGG:K01550 flagellar protein export ATPase FliI HMMPfam:IPR000194; HMMPfam:IPR004100; HMMTigr:IPR005714; ScanRegExp:IPR000194 YP_002937684.1 Cytoplasmic, score:8.87; COG1317 Flagellar biosynthesis/type III secretory pathway protein; KEGG:K02411 flagellar biosynthesis/type III secretory pathway protein YP_002937685.1 Cytoplasmic, score:8.87; COG1536 Flagellar motor switch protein; KEGG:K02410 flagellar motor switch protein G; HMMPfam:IPR000090; FPrintScan:IPR000090; HMMTigr:IPR000090; superfamily:IPR011002 YP_002937686.1 Unknown cell location; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; KEGG:K02409 flagellar biosynthesis/type III secretory pathway lipoprotein; HMMPfam:IPR006182; HMMTigr:IPR000067 YP_002937687.1 Unknown cell location; COG1677 Flagellar hook-basal body protein; HMMPfam:IPR001624; FPrintScan:IPR001624; HMMTigr:IPR001624 YP_002937688.1 Unknown cell location; COG1558 Flagellar basal body rod protein; KEGG:K02388 flagellar basal body rod protein; HMMPfam:IPR001444; HMMPfam:IPR010930; HMMTigr:IPR006299 YP_002937689.1 Unknown cell location; COG1815 Flagellar basal body protein; KEGG:K02387 hypothetical protein; HMMPfam:IPR001444; HMMTigr:IPR006300; ScanRegExp:IPR001444 YP_002937690.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_002937691.1 Cytoplasmic, score:8.87; COG0551 Zn-finger domain associated with topoisomerase type I; KEGG:K03168 DNA topoisomerase I HMMPfam:IPR006171; HMMPfam:IPR013497; HMMPfam:IPR013498; FPrintScan:IPR000380; Gene3D:IPR013824; Gene3D:IPR013826; HMMPanther:IPR000380; HMMSmart:IPR003601; HMMSmart:IPR003602; HMMSmart:IPR006154; HMMTigr:IPR005733; ScanRegExp:IPR000380; superfamily:IPR000380 YP_002937692.1 Cytoplasmic, score:8.87; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; KEGG:K04096 DNA protecting protein DprA; HMMPfam:IPR003488; HMMTigr:IPR003488 YP_002937693.1 Cytoplasmic, score:8.87; COG0606 Predicted ATPase with chaperone activity; KEGG:K07391 predicted ATPase with chaperone activity; HMMPfam:IPR000523; FPrintScan:IPR001208; HMMSmart:IPR003593; HMMTigr:IPR004482 YP_002937694.1 Cytoplasmic, score:9.98; COG1191 DNA-directed RNA polymerase specialized sigma subunit; KEGG:K03091 sporulation sigma factor SigK; HMMPfam:IPR007627; HMMPfam:IPR007630; FPrintScan:IPR000943; Gene3D:IPR011991; HMMTigr:IPR014284; ScanRegExp:IPR000943; superfamily:IPR013324; superfamily:IPR013325 YP_002937695.1 Cytoplasmic, score:8.87; COG0564 Pseudouridylate synthases, 23S RNA-specific; KEGG:K06180 pseudouridine synthase HMMPfam:IPR006145; BlastProDom:IPR006145; HMMTigr:IPR006225 YP_002937696.1 Unknown cell location YP_002937697.1 CytoplasmicMembrane, score:9.75; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; KEGG:K02438 glycogen operon protein GlgX HMMPfam:IPR006047; Gene3D:IPR013781 YP_002937698.1 Cytoplasmic, score:8.87; COG3906 Uncharacterized protein conserved in bacteria; HMMPfam:IPR009711 YP_002937699.1 Cytoplasmic, score:8.87; COG0210 Superfamily I DNA and RNA helicases; KEGG:0ATP-dependent DNA helicase HMMPfam:IPR000212; HMMPanther:IPR000212 YP_002937700.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002937701.1 Cytoplasmic, score:8.87 YP_002937702.1 Cytoplasmic, score:8.87 YP_002937703.1 Unknown cell location YP_002937704.1 Cytoplasmic, score:8.87 YP_002937705.1 Cytoplasmic, score:8.87; COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; KEGG:K00817 probable histidinol-phosphate aminotransferase HMMPfam:IPR004839; FPrintScan:IPR001176; Gene3D:IPR015421; Gene3D:IPR015422; HMMTigr:IPR005860; superfamily:IPR015424 YP_002937706.1 Unknown cell location YP_002937707.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain YP_002937708.1 Cytoplasmic, score:9.98; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; KEGG:K00528 ferredoxin--NADP(+) reductase subunit alpha HMMPfam:IPR001433; HMMPIR:IPR012165 YP_002937709.1 Cytoplasmic, score:8.87; COG0523 Putative GTPases (G3E family); KEGG:K08986 hypothetical protein YP_002937710.1 Cytoplasmic, score:8.87; COG0523 Putative GTPases (G3E family); KEGG:0putative cobalamin synthesis protein HMMPfam:IPR003495; HMMPfam:IPR011629 YP_002937711.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_002937712.1 CytoplasmicMembrane, score:9.49; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 methyl-accepting chemotaxis protein; HMMPfam:IPR003660; HMMPfam:IPR004089; FPrintScan:IPR004090; HMMSmart:IPR004089 YP_002937713.1 Unknown cell location; COG2182 Maltose-binding periplasmic proteins/domains; KEGG:K02027 putative maltose ABC transporter, sugar-binding protein; HMMPfam:IPR006059 YP_002937714.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002937715.1 Unknown cell location YP_002937716.1 Cytoplasmic, score:8.87; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; KEGG:0metal dependent hydrolase YP_002937717.1 Cytoplasmic, score:8.87; NOG05962 non supervised orthologous group; KEGG:K06398 stage IV sporulation protein A; HMMTigr:IPR014201 YP_002937718.1 Cytoplasmic, score:9.65; COG1640 4-alpha-glucanotransferase; KEGG:K00705 4-alpha-glucanotransferase HMMPfam:IPR003385; Gene3D:IPR013781; HMMTigr:IPR003385 YP_002937719.1 Extracellular, score:8.82 YP_002937720.1 CytoplasmicMembrane, score:10.00; COG0038 Chloride channel protein EriC; KEGG:K03281 chloride channel protein EriC; HMMPfam:IPR014743; HMMPanther:IPR001807 YP_002937721.1 Cytoplasmic, score:9.65; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; KEGG:K01200 pullulanase HMMPfam:IPR004193; HMMPfam:IPR006047; Gene3D:IPR013781; HMMSmart:IPR006589; HMMTigr:IPR011840; superfamily:IPR014756 YP_002937722.1 Cytoplasmic, score:9.98; COG0300 Short-chain dehydrogenases of various substrate specificities; KEGG:0ketoacyl reductase, putative; HMMPfam:IPR002198; FPrintScan:IPR002198; FPrintScan:IPR002347; HMMPanther:IPR002198 YP_002937723.1 Unknown cell location YP_002937724.1 Unknown cell location; COG4509 Uncharacterized protein conserved in bacteria; KEGG:K08600 hypothetical protein; HMMPfam:IPR009835 YP_002937725.1 CytoplasmicMembrane, score:9.87; COG0681 Signal peptidase I; KEGG:K03100 signal peptidase (type I) HMMPfam:IPR011056; FPrintScan:IPR001733; HMMPanther:IPR001733; HMMTigr:IPR001733; superfamily:IPR015927 YP_002937726.1 Cytoplasmic, score:8.87; COG3947 Response regulator containing CheY-like receiver and SARP domains; HMMPfam:IPR001867 YP_002937727.1 Cytoplasmic, score:8.87; COG0782 Transcription elongation factor; KEGG:K03624 transcription elongation factor GreA; HMMPfam:IPR001437; BlastProDom:IPR001437; Gene3D:IPR001437; superfamily:IPR001437 YP_002937728.1 CytoplasmicMembrane, score:9.99; COG1968 Uncharacterized bacitracin resistance protein; KEGG:K06153 undecaprenyl-diphosphatase HMMPfam:IPR003824; HMMTigr:IPR003824 YP_002937729.1 Cytoplasmic, score:8.87; COG2358 TRAP-type uncharacterized transport system, periplasmic component; KEGG:0TRAP transporter solute receptor, TAXI family; HMMTigr:IPR011852 YP_002937730.1 CytoplasmicMembrane, score:10.00; COG0786 Na+/glutamate symporter; KEGG:K03312 sodium/glutamate symporter; HMMPfam:IPR004445; HMMTigr:IPR004445 YP_002937731.1 Extracellular, score:8.82 YP_002937732.1 Unknown cell location YP_002937733.1 CytoplasmicMembrane, score:9.99; COG0655 Multimeric flavodoxin WrbA; HMMPfam:IPR005025 YP_002937734.1 CytoplasmicMembrane, score:9.99; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 methyl-accepting chemotaxis protein; HMMPfam:IPR004089; HMMPfam:IPR009875; HMMSmart:IPR004089 YP_002937735.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002937736.1 Unknown cell location; KOG4744 Uncharacterized conserved protein YP_002937737.1 Unknown cell location YP_002937738.1 Unknown cell location YP_002937739.1 Unknown cell location YP_002937740.1 Unknown cell location YP_002937741.1 Unknown cell location; COG3764 Sortase (surface protein transpeptidase); KEGG:K07284 sortase family protein; HMMPfam:IPR005754; HMMTigr:IPR005754; ScanRegExp:IPR002048 YP_002937742.1 Cellwall, score:10.00; NOG22227 non supervised orthologous group; HMMPfam:IPR001899; HMMPfam:IPR008454; HMMTigr:IPR001899 YP_002937743.1 Cellwall, score:10.00; COG4932 Predicted outer membrane protein; HMMPfam:IPR008454; HMMPfam:IPR008456; Gene3D:IPR008970; HMMTigr:IPR001899; superfamily:IPR008966; superfamily:IPR008970 YP_002937744.1 Unknown cell location; COG0681 Signal peptidase I; KEGG:K03100 signal peptidase I HMMPfam:IPR011056; FPrintScan:IPR000223; Gene3D:IPR011056; HMMPanther:IPR000223; HMMPanther:IPR014037; HMMTigr:IPR000223; ScanRegExp:IPR000223; superfamily:IPR015927 YP_002937745.1 Cytoplasmic, score:8.87 YP_002937746.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002937747.1 Unknown cell location; FPrintScan:IPR001940 YP_002937748.1 Cytoplasmic, score:8.87; COG1381 Recombinational DNA repair protein (RecF pathway); KEGG:K03584 DNA repair and genetic recombination protein; HMMPfam:IPR003717; HMMTigr:IPR003717 YP_002937749.1 Cytoplasmic, score:8.87; COG1159 GTPase; KEGG:K03595 GTP-binding protein Era; HMMPfam:IPR002917; HMMPfam:IPR004044; FPrintScan:IPR001806; Gene3D:IPR015946; HMMTigr:IPR005225; HMMTigr:IPR005289; HMMTigr:IPR005662; superfamily:IPR009019 YP_002937750.1 Cytoplasmic, score:8.87; COG1026 Predicted Zn-dependent peptidases, insulinase-like; KEGG:0Zn-dependent peptidase, insulinase family; HMMPfam:IPR007863; HMMPfam:IPR013578; Gene3D:IPR011237; superfamily:IPR011249 YP_002937751.1 CytoplasmicMembrane, score:9.99; COG0668 Small-conductance mechanosensitive channel; KEGG:K03442 mechanosensitive channel protein; HMMPfam:IPR006685; ScanRegExp:IPR000873; ScanRegExp:IPR006686; superfamily:IPR010920; superfamily:IPR011014; superfamily:IPR011066 YP_002937752.1 Cytoplasmic, score:9.98; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; KEGG:K00058 hypothetical protein HMMPfam:IPR002912; HMMPfam:IPR006139; HMMPfam:IPR006140; ScanRegExp:IPR006140 YP_002937753.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_002937754.1 Cytoplasmic, score:8.87; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; KEGG:K01651 acetolactate synthase, large subunit, biosynthetic type HMMPfam:IPR011766; HMMPfam:IPR012000; HMMPfam:IPR012001; HMMTigr:IPR012846; ScanRegExp:IPR000399 YP_002937755.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002937756.1 Cytoplasmic, score:9.98; COG0473 Isocitrate/isopropylmalate dehydrogenase; KEGG:K00052 3-isopropylmalate dehydrogenase HMMPfam:IPR001804; Gene3D:IPR001804; HMMPanther:IPR001804; HMMPanther:IPR004429; HMMTigr:IPR004429; ScanRegExp:IPR001804 YP_002937757.1 Unknown cell location; COG1862 Preprotein translocase subunit YajC; KEGG:K03210 preprotein translocase subunit YajC; HMMPfam:IPR003849; BlastProDom:IPR003849; FPrintScan:IPR003849; HMMTigr:IPR003849 YP_002937758.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) YP_002937759.1 Cytoplasmic, score:8.87; COG0366 Glycosidases; KEGG:K01234 neopullulanase, putative YP_002937760.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002937761.1 CytoplasmicMembrane, score:10.00 YP_002937762.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K01990 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002937763.1 CytoplasmicMembrane, score:9.87; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K02027 conserved hypothetical protein YP_002937764.1 Cytoplasmic, score:8.87 YP_002937765.1 CytoplasmicMembrane, score:9.97; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; KEGG:0two-component sensor kinase HMMPfam:IPR003594; superfamily:IPR003594 YP_002937766.1 Cytoplasmic, score:8.87; COG3279 Response regulator of the LytR/AlgR family; KEGG:K07705 two-component response regulator; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002937767.1 CytoplasmicMembrane, score:9.99; NOG34966 non supervised orthologous group; HMMPfam:IPR006741; HMMSmart:IPR006741 YP_002937768.1 Cytoplasmic, score:8.87; COG0826 Collagenase and related proteases; KEGG:K08303 peptidase U32 HMMPfam:IPR001539; BlastProDom:IPR001539; ScanRegExp:IPR001539 YP_002937769.1 Cytoplasmic, score:8.87; COG4122 Predicted O-methyltransferase; KEGG:0O-methyltransferase HMMPfam:IPR002935; HMMPanther:IPR002935 YP_002937770.1 Cytoplasmic, score:8.87; COG1559 Predicted periplasmic solute-binding protein; HMMPfam:IPR003770 YP_002937771.1 CytoplasmicMembrane, score:9.76; COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily; KEGG:0predicted hydrolase of the metallo-beta-lactamase superfamily; HMMPfam:IPR001279; HMMPfam:IPR011108; HMMTigr:IPR004613; ScanRegExp:IPR005829 YP_002937772.1 Cytoplasmic, score:8.87 YP_002937773.1 Cytoplasmic, score:8.87; COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); KEGG:K07447 hypothetical protein HMMPfam:IPR005227; Gene3D:IPR005227; HMMSmart:IPR006641; HMMTigr:IPR005227; superfamily:IPR012337 YP_002937774.1 Unknown cell location; COG4472 Uncharacterized protein conserved in bacteria; HMMPfam:IPR009309 YP_002937775.1 Cytoplasmic, score:8.87; COG0621 2-methylthioadenine synthetase; KEGG:K08070 MiaB-like tRNA modifying enzyme HMMPfam:IPR007197; HMMPfam:IPR013848; Gene3D:IPR013785; HMMPanther:IPR005839; HMMSmart:IPR006638; HMMTigr:IPR005839; HMMTigr:IPR006467; ScanRegExp:IPR005839 YP_002937776.1 Unknown cell location YP_002937777.1 Cytoplasmic, score:8.87; superfamily:IPR000032 YP_002937778.1 Cytoplasmic, score:9.98; COG0301 Thiamine biosynthesis ATP pyrophosphatase; KEGG:K03151 thiamine biosynthesis ATP pyrophosphatase; HMMPfam:IPR003720; HMMPfam:IPR004114; HMMTigr:IPR003720 YP_002937779.1 Unknown cell location; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; KEGG:K04487 cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme HMMPfam:IPR000192; Gene3D:IPR015421; ScanRegExp:IPR000192; superfamily:IPR015424 YP_002937780.1 Cytoplasmic, score:8.87; COG1385 Uncharacterized protein conserved in bacteria; KEGG:K09761 protein of unknown function DUF558; HMMPfam:IPR006700; HMMTigr:IPR006700; superfamily:IPR015947 YP_002937781.1 Cytoplasmic, score:8.87; COG2264 Ribosomal protein L11 methylase; KEGG:K02687 ribosomal protein L11 methyltransferase HMMPfam:IPR010456; HMMTigr:IPR004498 YP_002937782.1 Cytoplasmic, score:9.65; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; KEGG:K03686 chaperone protein DnaJ, putative; HMMPfam:IPR001305; HMMPfam:IPR002939; HMMPanther:IPR015609; superfamily:IPR008971 YP_002937783.1 Cytoplasmic, score:9.98; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; KEGG:K03686 DnaJ protein; HMMPfam:IPR001623; FPrintScan:IPR003095; Gene3D:IPR001623; HMMPanther:IPR015609; HMMSmart:IPR001623; ScanRegExp:IPR001623; superfamily:IPR001623 YP_002937784.1 Cytoplasmic, score:9.65; COG0443 Molecular chaperone; KEGG:K08070 chaperone protein DnaK HMMPfam:IPR013126; BlastProDom:IPR013126; FPrintScan:IPR001023; HMMPanther:IPR001023; HMMTigr:IPR012725; ScanRegExp:IPR013126 YP_002937785.1 Extracellular, score:8.82 YP_002937786.1 Cytoplasmic, score:8.87; COG0576 Molecular chaperone GrpE (heat shock protein); KEGG:K03687 molecular chaperone GrpE; HMMPfam:IPR000740; FPrintScan:IPR000740; Gene3D:IPR009012; Gene3D:IPR013805; HMMPanther:IPR000740; ScanRegExp:IPR000740; superfamily:IPR009012 YP_002937787.1 Cytoplasmic, score:8.87; COG1420 Transcriptional regulator of heat shock gene; KEGG:K03705 heat-inducible transcription repressor; HMMPfam:IPR002571; Gene3D:IPR011991; HMMTigr:IPR002571 YP_002937788.1 Cytoplasmic, score:8.87; COG3077 DNA-damage-inducible protein J YP_002937789.1 Cytoplasmic, score:8.87; COG2158 Uncharacterized protein containing a Zn-finger-like domain; KEGG:0predicted metal-binding protein; HMMPfam:IPR007212 YP_002937790.1 Cytoplasmic, score:8.87; COG1797 Cobyrinic acid a,c-diamide synthase; KEGG:K02224 cobyrinic acid a,c-diamide synthase HMMPfam:IPR002586; HMMPfam:IPR011698; HMMTigr:IPR004484 YP_002937791.1 Cytoplasmic, score:8.87; COG2241 Precorrin-6B methylase 1; KEGG:K00595 K03398 precorrin-6Y C(5,15)-methyltransferase HMMPfam:IPR000878; HMMPfam:IPR003723; HMMPfam:IPR007848; Gene3D:IPR014777; HMMTigr:IPR003723; HMMTigr:IPR012818; HMMTigr:IPR014008; superfamily:IPR000878 YP_002937792.1 Cytoplasmic, score:8.87; COG1492 Cobyric acid synthase; KEGG:0cobalt-precorrin-3b c(17)-methyltransferase HMMPfam:IPR000878; Gene3D:IPR014777; HMMTigr:IPR006363; superfamily:IPR000878 YP_002937793.1 Unknown cell location; COG2073 Cobalamin biosynthesis protein CbiG; KEGG:K02189 cobalamin biosynthesis protein CbiG; HMMPfam:IPR002750 YP_002937794.1 Unknown cell location; COG2875 Precorrin-4 methylase; KEGG:K05936 precorrin-4 C11-methyltransferase HMMPfam:IPR000878; Gene3D:IPR014776; Gene3D:IPR014777; HMMTigr:IPR006362; superfamily:IPR000878 YP_002937795.1 Cytoplasmic, score:8.87; COG1903 Cobalamin biosynthesis protein CbiD; KEGG:K02188 cobalamin biosynthesis protein CbiD; HMMPfam:IPR002748; HMMPIR:IPR002748; HMMTigr:IPR002748; superfamily:IPR002748 YP_002937796.1 Cytoplasmic, score:8.87; COG2082 Precorrin isomerase; KEGG:K06042 precorrin-8X methylmutase CbiC/CobH HMMPfam:IPR003722; BlastProDom:IPR003722; Gene3D:IPR003722; superfamily:IPR003722 YP_002937797.1 CytoplasmicMembrane, score:7.80; COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; KEGG:K00817 probable Thr-phospho decarboxylase HMMPfam:IPR004839; Gene3D:IPR015421; Gene3D:IPR015422; HMMTigr:IPR005860; superfamily:IPR015424 YP_002937798.1 CytoplasmicMembrane, score:9.99; COG1270 Cobalamin biosynthesis protein CobD/CbiB; KEGG:K02227 cobalamin biosynthesis protein CobD HMMPfam:IPR004485; HMMTigr:IPR004485 YP_002937799.1 Cytoplasmic, score:8.87; COG0406 Fructose-2,6-bisphosphatase; KEGG:K02226 alpha-ribazole-5-phosphate phosphatase HMMPfam:IPR013078 YP_002937800.1 Cytoplasmic, score:8.87; COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; BlastProDom:IPR003203 YP_002937801.1 CytoplasmicMembrane, score:9.99; COG0368 Cobalamin-5-phosphate synthase; KEGG:K02233 cobalamin 5-phosphate synthase HMMPfam:IPR003805 YP_002937802.1 Cytoplasmic, score:8.87; COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; KEGG:K02231 probable cobinamide kinase/cobinamide phosphate guanylyltransferase HMMPfam:IPR003203; BlastProDom:IPR003203; HMMPIR:IPR003203 YP_002937803.1 Cytoplasmic, score:9.98; COG2038 NaMN:DMB phosphoribosyltransferase; KEGG:K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase HMMPfam:IPR003200; BlastProDom:IPR008281; superfamily:IPR003200 YP_002937804.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_002937805.1 CytoplasmicMembrane, score:10.00; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; KEGG:K02013 ferric enterobactin transport ATP-binding protein fepC HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR005829 YP_002937806.1 CytoplasmicMembrane, score:10.00; COG0609 ABC-type Fe3+-siderophore transport system, permease component; KEGG:K02015 iron compound ABC transporter, permease protein, putative; HMMPfam:IPR000522 YP_002937807.1 Unknown cell location; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; KEGG:K02016 iron compound ABC transporter, periplasmic iron compound-binding protein, putative; HMMPfam:IPR002491 YP_002937808.1 Unknown cell location YP_002937809.1 Unknown cell location; COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase; KEGG:K02190 anaerobic cobalt chelatase cbiK HMMPfam:IPR010388; ScanRegExp:IPR000223 YP_002937810.1 CytoplasmicMembrane, score:7.63; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; KEGG:K06131 cardiolipin synthase HMMPfam:IPR001736; HMMSmart:IPR001736 YP_002937811.1 Extracellular, score:9.55; COG1404 Subtilisin-like serine proteases; KEGG:0hypothetical protein HMMPfam:IPR000209; FPrintScan:IPR000209; Gene3D:IPR000209; HMMPanther:IPR015500; ScanRegExp:IPR000209; superfamily:IPR000209 YP_002937812.1 Cytoplasmic, score:9.98; COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); KEGG:K00962 polyribonucleotide nucleotidyltransferase HMMPfam:IPR001247; HMMPfam:IPR003029; HMMPfam:IPR004088; HMMPfam:IPR015847; HMMPfam:IPR015848; Gene3D:IPR012340; Gene3D:IPR015848; HMMPIR:IPR012162; HMMPanther:IPR012162; HMMSmart:IPR003029; HMMSmart:IPR004087; superfamily:IPR015847; superfamily:IPR015848 YP_002937813.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_002937814.1 Extracellular, score:9.55; COG0791 Cell wall-associated hydrolases (invasion-associated proteins); KEGG:K01446 N-acetylmuramoyl-L-alanine amidase, C-terminus HMMPfam:IPR000064; HMMPfam:IPR013247; HMMSmart:IPR003646 YP_002937815.1 Extracellular, score:8.82 YP_002937816.1 Cytoplasmic, score:8.87; COG0196 FAD synthase; KEGG:K00861 K00953 bifunctional riboflavin kinase/FMN adenylyltransferase HMMPfam:IPR015864; HMMPfam:IPR015865; BlastProDom:IPR015865; Gene3D:IPR014729; Gene3D:IPR015865; HMMPanther:IPR015865; HMMTigr:IPR002606 YP_002937817.1 Cytoplasmic, score:8.87; COG0130 Pseudouridine synthase; KEGG:K03177 tRNA pseudouridine synthase B HMMPfam:IPR002501; HMMTigr:IPR014780 YP_002937818.1 Cytoplasmic, score:8.87; COG0618 Exopolyphosphatase-related proteins; KEGG:0exopolyphosphatase-related proteins; HMMPfam:IPR001667; HMMPfam:IPR003156 YP_002937819.1 Cytoplasmic, score:9.65; COG0858 Ribosome-binding factor A; KEGG:K02834 ribosome-binding factor A; HMMPfam:IPR000238; BlastProDom:IPR000238; Gene3D:IPR015946; HMMTigr:IPR000238; ScanRegExp:IPR000238; superfamily:IPR000238 YP_002937820.1 Cytoplasmic, score:9.98; COG0532 Translation initiation factor 2 (IF-2; GTPase); KEGG:K02519 translation initiation factor IF-2; HMMPfam:IPR000795; HMMPfam:IPR004161; HMMPfam:IPR006847; HMMPanther:IPR015760; HMMTigr:IPR000178; HMMTigr:IPR005225; ScanRegExp:IPR000178; superfamily:IPR009000 YP_002937821.1 Unknown cell location; COG1358 Ribosomal protein HS6-type (S12/L30/L7a); HMMPfam:IPR004038; BlastProDom:IPR004038 YP_002937822.1 Cytoplasmic, score:8.87; COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination; KEGG:K07742 protein of unknown function DUF448; HMMPfam:IPR007393 YP_002937823.1 Cytoplasmic, score:8.87; COG0195 Transcription elongation factor; KEGG:K02600 transcription elongation factor NusA; HMMPfam:IPR003029; HMMPfam:IPR013735; Gene3D:IPR012340; Gene3D:IPR013735; Gene3D:IPR015946; HMMSmart:IPR003029; HMMTigr:IPR010213; superfamily:IPR009019; superfamily:IPR013735 YP_002937824.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_002937825.1 Unknown cell location; COG1087 UDP-glucose 4-epimerase; KEGG:K01784 UDP-glucose 4-epimerase HMMPfam:IPR001509; HMMPanther:IPR005886; HMMTigr:IPR005886 YP_002937826.1 Cytoplasmic, score:9.65; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K02099 transcriptional regulator, AraC family; HMMPfam:IPR000005; HMMPfam:IPR003313; Gene3D:IPR012287; HMMSmart:IPR000005; superfamily:IPR003313; superfamily:IPR009057 YP_002937827.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_002937828.1 Extracellular, score:8.82; COG0291 Ribosomal protein L35; HMMPfam:IPR001706; BlastProDom:IPR001706; HMMTigr:IPR001706; ScanRegExp:IPR001706 YP_002937829.1 Cytoplasmic, score:9.98; COG0290 Translation initiation factor 3 (IF-3); KEGG:K02520 translation initiation factor IF-3; HMMPfam:IPR001288; BlastProDom:IPR001288; Gene3D:IPR001288; HMMPanther:IPR001288; HMMTigr:IPR001288; ScanRegExp:IPR001288; superfamily:IPR001288 YP_002937830.1 Cytoplasmic, score:9.98; COG0077 Prephenate dehydratase; KEGG:K01713 prephenate dehydratase HMMPfam:IPR001086; HMMPfam:IPR002701; HMMPIR:IPR008242; ScanRegExp:IPR001086; superfamily:IPR002701 YP_002937831.1 Unknown cell location YP_002937832.1 Unknown cell location; COG3291 FOG: PKD repeat; HMMPfam:IPR001440; HMMPfam:IPR013105; Gene3D:IPR011990; HMMSmart:IPR013026 YP_002937833.1 Cytoplasmic, score:8.87; COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; KEGG:K00288 methylenetetrahydrofolate dehydrogenase (NADP(+)) HMMPfam:IPR000672; BlastProDom:IPR000672; ScanRegExp:IPR000672 YP_002937834.1 Cytoplasmic, score:8.87; COG2759 Formyltetrahydrofolate synthetase; KEGG:K01938 formate--tetrahydrofolate ligase HMMPfam:IPR000559; ScanRegExp:IPR000559 YP_002937835.1 CytoplasmicMembrane, score:9.97; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; KEGG:K03466 DNA translocase FtsK; HMMPfam:IPR002543; HMMSmart:IPR003593 YP_002937836.1 Unknown cell location; COG0297 Glycogen synthase; KEGG:K00703 glycogen synthase HMMPfam:IPR001296; HMMPfam:IPR013534; HMMTigr:IPR011835 YP_002937837.1 Cytoplasmic, score:8.87; COG0217 Uncharacterized conserved protein; KEGG:K00975 hypothetical protein HMMPfam:IPR002876; BlastProDom:IPR002876; Gene3D:IPR003308; HMMPanther:IPR002876; HMMTigr:IPR002876; superfamily:IPR002876 YP_002937838.1 Cytoplasmic, score:8.87; COG1253 Hemolysins and related proteins containing CBS domains; KEGG:K03699 hemolysin; HMMPfam:IPR000644; HMMPfam:IPR005170 YP_002937839.1 Cytoplasmic, score:8.87; COG2337 Growth inhibitor; KEGG:0growth inhibitor; HMMPfam:IPR003477; Gene3D:IPR011067; superfamily:IPR011067 YP_002937840.1 Cytoplasmic, score:9.36; COG0787 Alanine racemase; KEGG:K01775 alanine racemase HMMPfam:IPR001608; HMMPfam:IPR011079; HMMTigr:IPR000821; ScanRegExp:IPR000821; superfamily:IPR009006 YP_002937841.1 Cytoplasmic, score:8.87; COG0063 Predicted sugar kinase; KEGG:0YjeF-like protein/carbohydrate kinase HMMPfam:IPR000631; HMMPfam:IPR004443; HMMTigr:IPR000631; HMMTigr:IPR004443; ScanRegExp:IPR000631 YP_002937842.1 Unknown cell location; NOG13196 non supervised orthologous group YP_002937843.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002937844.1 Converts isocitrate to alpha ketoglutarate YP_002937845.1 Cytoplasmic, score:8.87; COG1802 Transcriptional regulators; KEGG:K05799 transcriptional regulator, GntR family; HMMPfam:IPR000524; HMMPfam:IPR011711; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002937846.1 Cytoplasmic, score:8.87; COG0119 Isopropylmalate/homocitrate/citramalate synthases; KEGG:K01649 2-isopropylmalate synthase HMMPfam:IPR000891; Gene3D:IPR013785 YP_002937847.1 Unknown cell location YP_002937849.1 Unknown cell location YP_002937850.1 Unknown cell location YP_002937851.1 Unknown cell location YP_002937852.1 Unknown cell location YP_002937853.1 Unknown cell location; NOG34795 non supervised orthologous group; Gene3D:IPR011042 YP_002937854.1 Cytoplasmic, score:9.98; COG0480 Translation elongation factors (GTPases); KEGG:K02355 elongation factor G HMMPfam:IPR000640; HMMPfam:IPR000795; HMMPfam:IPR004161; HMMPfam:IPR005517; Gene3D:IPR000640; Gene3D:IPR014721; HMMTigr:IPR005225; superfamily:IPR009000; superfamily:IPR009022 YP_002937855.1 Cytoplasmic, score:8.87; COG0287 Prephenate dehydrogenase; KEGG:K04517 prephenate dehydrogenase HMMPfam:IPR003099; HMMPanther:IPR003099 YP_002937856.1 Cytoplasmic, score:8.87; COG0128 5-enolpyruvylshikimate-3-phosphate synthase; KEGG:K00800 3-phosphoshikimate 1-carboxyvinyltransferase HMMPfam:IPR001986; BlastProDom:IPR001986; Gene3D:IPR001986; HMMTigr:IPR006264; superfamily:IPR013792 YP_002937857.1 Cytoplasmic, score:8.87; HMMPfam:IPR009875 YP_002937858.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_002937859.1 Cytoplasmic, score:9.98; COG0073 EMAP domain; KEGG:K01888 phenylalanyl-tRNA synthetase, beta subunit HMMPfam:IPR002547; HMMPfam:IPR005121; HMMPfam:IPR005146; HMMPfam:IPR005147; Gene3D:IPR005121; Gene3D:IPR005147; Gene3D:IPR012340; HMMTigr:IPR004532; ScanRegExp:IPR001412; superfamily:IPR005121; superfamily:IPR009061 YP_002937860.1 Cytoplasmic, score:10.00; COG0016 Phenylalanyl-tRNA synthetase alpha subunit; KEGG:K01889 phenylalanyl-tRNA synthetase, alpha subunit HMMPfam:IPR002319; HMMPfam:IPR004188; HMMPanther:IPR002319; HMMTigr:IPR004529; superfamily:IPR010978 YP_002937861.1 Cytoplasmic, score:8.87; COG3270 Uncharacterized conserved protein; KEGG:0NOL1/NOP2/sun family protein HMMPfam:IPR001678; BlastProDom:IPR006174; HMMTigr:IPR011023; ScanRegExp:IPR000572 YP_002937862.1 Extracellular, score:8.82 YP_002937863.1 Unknown cell location; COG2385 Sporulation protein and related proteins; KEGG:K06381 sporulation protein SpoIID; HMMPfam:IPR013693; HMMTigr:IPR013486 YP_002937864.1 CytoplasmicMembrane, score:9.99 YP_002937865.1 Cytoplasmic, score:9.98; COG0784 FOG: CheY-like receiver; KEGG:K03413 response regulator receiver domain protein (CheY-like); HMMPfam:IPR001789; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002937866.1 Cytoplasmic, score:8.87; NOG24769 non supervised orthologous group YP_002937867.1 Cytoplasmic, score:8.87; COG0498 Threonine synthase; KEGG:K01733 threonine synthase HMMPfam:IPR001926; HMMTigr:IPR004450; ScanRegExp:IPR000634 YP_002937868.1 Extracellular, score:8.82 YP_002937869.1 Unknown cell location YP_002937870.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis YP_002937871.1 Cytoplasmic, score:8.87; COG0065 3-isopropylmalate dehydratase large subunit; KEGG:K01702 3-isopropylmalate dehydratase, large subunit HMMPfam:IPR001030; BlastProDom:IPR001030; Gene3D:IPR015931; Gene3D:IPR015932; HMMPanther:IPR015936; HMMPanther:IPR015937; HMMTigr:IPR006251; HMMTigr:IPR011823; HMMTigr:IPR011826; ScanRegExp:IPR001030; superfamily:IPR001030 YP_002937872.1 Cytoplasmic, score:9.98; COG0583 Transcriptional regulator; KEGG:K01672 carbonate dehydratase HMMPfam:IPR000847; HMMPfam:IPR005119; Gene3D:IPR011991 YP_002937873.1 Cytoplasmic, score:8.87 YP_002937874.1 Cytoplasmic, score:9.98; COG0495 Leucyl-tRNA synthetase; KEGG:K01869 leucyl-tRNA synthetase HMMPfam:IPR002300; HMMPfam:IPR013155; Gene3D:IPR014729; HMMPanther:IPR002302; HMMTigr:IPR002302; superfamily:IPR009008; superfamily:IPR009080 YP_002937875.1 Cytoplasmic, score:8.87; COG0059 Ketol-acid reductoisomerase; KEGG:K00053 ketol-acid reductoisomerase HMMPfam:IPR000506; HMMPfam:IPR013116; HMMPanther:IPR013023; HMMTigr:IPR013023; superfamily:IPR008927 YP_002937876.1 Cytoplasmic, score:8.87; COG0440 Acetolactate synthase, small (regulatory) subunit; KEGG:K01653 acetolactate synthase 3 regulatory subunit HMMPfam:IPR002912; BlastProDom:IPR004789; HMMTigr:IPR004789 YP_002937877.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_002937878.1 CytoplasmicMembrane, score:9.49; COG1126 ABC-type polar amino acid transport system, ATPase component; KEGG:K02028 putative amino acid ABC transporter, ATP-binding protein HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002937879.1 CytoplasmicMembrane, score:10.00; COG0765 ABC-type amino acid transport system, permease component; KEGG:K02029 predicted ABC-type polar amino acid transport system, permease protein; HMMPfam:IPR000515; HMMTigr:IPR010065 YP_002937880.1 Unknown cell location; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; KEGG:K02030 amino acid ABC transporter, periplasmic amino acid-binding protein; HMMPfam:IPR001638 YP_002937881.1 CytoplasmicMembrane, score:9.99; COG0679 Predicted permeases; KEGG:0hypothetical protein; HMMPfam:IPR004776 YP_002937882.1 Cytoplasmic, score:8.87; COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; KEGG:K03429 1,2-diacylglycerol 3-glucosyltransferase HMMPfam:IPR009695 YP_002937883.1 CytoplasmicMembrane, score:9.99; COG0344 Predicted membrane protein; KEGG:K08591 hypothetical protein; HMMPfam:IPR003811 YP_002937884.1 Cytoplasmic, score:8.87; COG2199 FOG: GGDEF domain; KEGG:K07212 K07216 GGDEF family protein; HMMPfam:IPR000160; HMMSmart:IPR000160; HMMTigr:IPR000160 YP_002937885.1 Unknown cell location; NOG30171 non supervised orthologous group YP_002937886.1 Unknown cell location YP_002937887.1 Cytoplasmic, score:8.87; COG3316 Transposase and inactivated derivatives; HMMPfam:IPR001584; superfamily:IPR012337 YP_002937888.1 Cytoplasmic, score:8.87; COG3279 Response regulator of the LytR/AlgR family; HMMPfam:IPR007492 YP_002937889.1 CytoplasmicMembrane, score:9.26 YP_002937890.1 Extracellular, score:8.82 YP_002937891.1 Unknown cell location; COG4823 Abortive infection bacteriophage resistance protein; HMMPfam:IPR011664 YP_002937892.1 Cytoplasmic, score:8.87 YP_002937893.1 CytoplasmicMembrane, score:9.99 YP_002937894.1 Unknown cell location; COG1309 Transcriptional regulator; HMMPfam:IPR001647; Gene3D:IPR012287; superfamily:IPR009057 YP_002937895.1 Cytoplasmic, score:8.87; COG3250 Beta-galactosidase/beta-glucuronidase; KEGG:0glycosyl hydrolase, family 2-likely beta-galactosidase HMMPfam:IPR006102; HMMPfam:IPR006103; HMMPfam:IPR006104; Gene3D:IPR013781; superfamily:IPR006102; superfamily:IPR008979 YP_002937896.1 CytoplasmicMembrane, score:10.00; COG2211 Na+/melibiose symporter and related transporters; KEGG:K03292 hypothetical protein; HMMPfam:IPR011701; HMMTigr:IPR001927 YP_002937897.1 Cytoplasmic, score:8.87; COG2207 AraC-type DNA-binding domain-containing proteins; HMMPfam:IPR000005; Gene3D:IPR012287; HMMSmart:IPR000005; superfamily:IPR003313; superfamily:IPR009057 YP_002937898.1 Cytoplasmic, score:8.87; COG3177 Uncharacterized conserved protein; HMMPfam:IPR003812 YP_002937899.1 CytoplasmicMembrane, score:9.49; COG0642 Signal transduction histidine kinase; KEGG:K07642 hypothetical protein HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003660; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002937900.1 Cytoplasmic, score:9.55; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 response regulator; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; ScanRegExp:IPR005829; superfamily:IPR011006 YP_002937901.1 Unknown cell location YP_002937902.1 CytoplasmicMembrane, score:9.26; COG0348 Polyferredoxin; KEGG:K02574 putative iron-sulfur-binding membrane protein; HMMPfam:IPR001450; ScanRegExp:IPR001450 YP_002937903.1 Unknown cell location; COG0526 Thiol-disulfide isomerase and thioredoxins; KEGG:K02199 alkyl hydroperoxide reductase; HMMPfam:IPR000866; BlastProDom:IPR011594; Gene3D:IPR012335; superfamily:IPR012336 YP_002937904.1 Cytoplasmic, score:9.98; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K07720 two-component response regulator; HMMPfam:IPR000005; Gene3D:IPR012287; HMMSmart:IPR000005; ScanRegExp:IPR000005; superfamily:IPR009057; superfamily:IPR011051 YP_002937905.1 CytoplasmicMembrane, score:10.00; COG2211 Na+/melibiose symporter and related transporters; KEGG:K03292 hypothetical protein; HMMPfam:IPR011701; HMMTigr:IPR001927 YP_002937906.1 Cytoplasmic, score:8.87 YP_002937907.1 Cytoplasmic, score:9.98; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K07720 two-component response regulator; HMMPfam:IPR000005; HMMPfam:IPR003313; Gene3D:IPR012287; HMMSmart:IPR000005; superfamily:IPR003313; superfamily:IPR009057 YP_002937908.1 Cytoplasmic, score:8.87; COG3250 Beta-galactosidase/beta-glucuronidase; KEGG:K01190 beta-galactosidase, small subunit (lactase, small subunit) HMMPfam:IPR004199; Gene3D:IPR014718; superfamily:IPR011013 YP_002937909.1 Cytoplasmic, score:8.87; COG3250 Beta-galactosidase/beta-glucuronidase; KEGG:K01190 beta-galactosidase, large subunit HMMPfam:IPR006102; HMMPfam:IPR006103; HMMPfam:IPR006104; Gene3D:IPR013781; Gene3D:IPR013812; ScanRegExp:IPR006101; superfamily:IPR006102; superfamily:IPR008979 YP_002937910.1 Cytoplasmic, score:8.87 YP_002937911.1 CytoplasmicMembrane, score:9.49; COG0642 Signal transduction histidine kinase; KEGG:0sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003660; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002937912.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 response regulator (CheY-like receiver domain and DNA-binding HTH domain); HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002937913.1 Unknown cell location; COG3584 Uncharacterized protein conserved in bacteria; HMMPfam:IPR005074 YP_002937914.1 Unknown cell location YP_002937915.1 Unknown cell location YP_002937916.1 Cytoplasmic, score:8.87 YP_002937917.1 Extracellular, score:8.82 YP_002937918.1 Unknown cell location YP_002937919.1 Unknown cell location; superfamily:IPR010994 YP_002937920.1 Cytoplasmic, score:8.87; COG0629 Single-stranded DNA-binding protein; KEGG:K03111 single-strand binding protein; HMMPfam:IPR000424; Gene3D:IPR012340; HMMPanther:IPR011344; HMMTigr:IPR011344 YP_002937921.1 Cytoplasmic, score:8.87 YP_002937922.1 Cytoplasmic, score:8.87 YP_002937923.1 Unknown cell location; NOG18736 non supervised orthologous group; superfamily:IPR011068 YP_002937924.1 Cytoplasmic, score:8.87; HMMPfam:IPR002500; Gene3D:IPR014729 YP_002937925.1 Cytoplasmic, score:8.87; COG2337 Growth inhibitor; KEGG:0hypothetical protein; HMMPfam:IPR003477; Gene3D:IPR011067; superfamily:IPR011067 YP_002937926.1 Cytoplasmic, score:8.87; COG1475 Predicted transcriptional regulators; KEGG:K03497 chromosome partitioning protein, ParB family; HMMPfam:IPR003115; HMMSmart:IPR003115; HMMTigr:IPR004437 YP_002937927.1 Unknown cell location YP_002937928.1 Cytoplasmic, score:8.87 YP_002937929.1 Cytoplasmic, score:8.87 YP_002937930.1 Unknown cell location YP_002937931.1 Unknown cell location YP_002937932.1 Cytoplasmic, score:8.87; NOG11062 non supervised orthologous group YP_002937933.1 Cytoplasmic, score:8.87 YP_002937934.1 Cytoplasmic, score:8.87 YP_002937935.1 Cytoplasmic, score:8.87 YP_002937936.1 Cytoplasmic, score:8.87 YP_002937937.1 Unknown cell location; superfamily:IPR010982 YP_002937938.1 Cytoplasmic, score:8.87 YP_002937939.1 Extracellular, score:7.50 YP_002937940.1 Cytoplasmic, score:8.87 YP_002937941.1 Cytoplasmic, score:8.87 YP_002937942.1 Cytoplasmic, score:8.87 YP_002937943.1 Cytoplasmic, score:8.87 YP_002937944.1 Cytoplasmic, score:8.87 YP_002937945.1 Cytoplasmic, score:8.87 YP_002937946.1 Cytoplasmic, score:8.87 YP_002937947.1 Unknown cell location YP_002937948.1 Cytoplasmic, score:8.87 YP_002937949.1 Extracellular, score:8.82 YP_002937950.1 Unknown cell location YP_002937951.1 Unknown cell location YP_002937952.1 Cytoplasmic, score:8.87 YP_002937953.1 Extracellular, score:8.82 YP_002937954.1 Cytoplasmic, score:8.87; COG1388 FOG: LysM repeat; KEGG:K07273 glycoside hydrolase family 25; HMMPfam:IPR002053; HMMPfam:IPR002482; HMMPfam:IPR013168; BlastProDom:IPR002053; Gene3D:IPR013781; HMMSmart:IPR002482 YP_002937955.1 Unknown cell location YP_002937956.1 Unknown cell location YP_002937957.1 Cytoplasmic, score:8.87 YP_002937958.1 Cytoplasmic, score:8.87 YP_002937959.1 Cytoplasmic, score:8.87 YP_002937960.1 Cytoplasmic, score:8.87 YP_002937961.1 Unknown cell location; ScanRegExp:IPR001005 YP_002937962.1 Unknown cell location YP_002937963.1 Unknown cell location YP_002937964.1 Cytoplasmic, score:8.87 YP_002937965.1 Cytoplasmic, score:8.87; COG3299 Uncharacterized homolog of phage Mu protein gp47; HMMPfam:IPR006949 YP_002937966.1 Cytoplasmic, score:8.87 YP_002937967.1 Unknown cell location YP_002937968.1 Unknown cell location; NOG08930 non supervised orthologous group YP_002937969.1 Unknown cell location; COG1652 Uncharacterized protein containing LysM domain; HMMPfam:IPR002482; HMMSmart:IPR002482 YP_002937970.1 Cellwall, score:8.93; COG5412 Phage-related protein; HMMTigr:IPR010090; ScanRegExp:IPR005479 YP_002937971.1 Unknown cell location YP_002937972.1 Cytoplasmic, score:8.87 YP_002937973.1 Unknown cell location YP_002937974.1 Unknown cell location; NOG06341 non supervised orthologous group; ScanRegExp:IPR002198 YP_002937975.1 Unknown cell location YP_002937976.1 Unknown cell location YP_002937977.1 Cytoplasmic, score:8.87 YP_002937978.1 Unknown cell location YP_002937979.1 Cytoplasmic, score:8.87 YP_002937980.1 Cytoplasmic, score:8.87 YP_002937981.1 Unknown cell location; ScanRegExp:IPR010916 YP_002937982.1 Unknown cell location; NOG06281 non supervised orthologous group YP_002937983.1 Cytoplasmic, score:8.87 YP_002937984.1 Unknown cell location; COG0419 ATPase involved in DNA repair YP_002937985.1 Unknown cell location YP_002937986.1 Cytoplasmic, score:8.87; NOG27028 non supervised orthologous group YP_002937987.1 Cytoplasmic, score:8.87; HMMPfam:IPR006528 YP_002937988.1 Cytoplasmic, score:8.87; COG4383 Mu-like prophage protein gp29 YP_002937989.1 Cytoplasmic, score:8.87; COG5362 Phage-related terminase; HMMPfam:IPR004921; HMMTigr:IPR006517 YP_002937990.1 Cytoplasmic, score:8.87; NOG19949 non supervised orthologous group; superfamily:IPR009061 YP_002937991.1 Cytoplasmic, score:8.87; HMMPfam:IPR003115; HMMSmart:IPR003115 YP_002937992.1 Cytoplasmic, score:8.87 YP_002937993.1 Cytoplasmic, score:8.87 YP_002937994.1 Cytoplasmic, score:8.87 YP_002937995.1 Cytoplasmic, score:8.87 YP_002937996.1 Cytoplasmic, score:8.87 YP_002937997.1 Cytoplasmic, score:8.87 YP_002937998.1 Cytoplasmic, score:8.87 YP_002937999.1 Cytoplasmic, score:8.87 YP_002938000.1 Cytoplasmic, score:8.87 YP_002938001.1 Cytoplasmic, score:8.87; COG0419 ATPase involved in DNA repair; HMMPfam:IPR009785 YP_002938002.1 Cytoplasmic, score:8.87; COG4570 Holliday junction resolvase; HMMPfam:IPR008822 YP_002938003.1 Cytoplasmic, score:8.87 YP_002938004.1 Unknown cell location; COG1484 DNA replication protein; KEGG:K02315 hypothetical protein HMMSmart:IPR003593 YP_002938005.1 Cytoplasmic, score:8.87; COG3935 Putative primosome component and related proteins; HMMTigr:IPR010056 YP_002938006.1 Cytoplasmic, score:8.87; NOG14237 non supervised orthologous group YP_002938007.1 Unknown cell location; COG3723 Recombinational DNA repair protein (RecE pathway); KEGG:K07455 RecT family protein; HMMPfam:IPR004590; HMMTigr:IPR004590 YP_002938008.1 Cytoplasmic, score:8.87 YP_002938009.1 Cytoplasmic, score:8.87 YP_002938010.1 Unknown cell location; ScanRegExp:IPR002345 YP_002938011.1 Cytoplasmic, score:8.87; COG3773 Cell wall hydrolyses involved in spore germination; KEGG:K01449 spore-cortex-lytic enzyme, putative HMMPfam:IPR011105 YP_002938012.1 Cytoplasmic, score:8.87 YP_002938013.1 Unknown cell location; HMMPfam:IPR000843; superfamily:IPR010982 YP_002938014.1 Cytoplasmic, score:8.87; COG2932 Predicted transcriptional regulator; HMMPfam:IPR010744; HMMSmart:IPR001387; superfamily:IPR010982 YP_002938016.1 Unknown cell location YP_002938017.1 Unknown cell location; NOG08868 non supervised orthologous group; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002938018.1 Unknown cell location YP_002938019.1 Cytoplasmic, score:8.87; COG0582 Integrase; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR011010 YP_002938020.1 Cytoplasmic, score:8.87; NOG06133 non supervised orthologous group YP_002938021.1 Cytoplasmic, score:8.87; COG0822 NifU homolog involved in Fe-S cluster formation; HMMPanther:IPR002871 YP_002938022.1 Cytoplasmic, score:8.87; COG0110 Acetyltransferase (isoleucine patch superfamily); KEGG:K00972 putative UDP-N-acetylglucosamine diphosphorylase superfamily:IPR011004 YP_002938023.1 Cytoplasmic, score:8.87; COG0550 Topoisomerase IA; KEGG:K03169 DNA topoisomerase HMMPfam:IPR006171; HMMPfam:IPR013497; HMMPfam:IPR013498; Gene3D:IPR013824; Gene3D:IPR013826; HMMPanther:IPR000380; HMMSmart:IPR003601; HMMSmart:IPR003602; HMMSmart:IPR006154; ScanRegExp:IPR000380; superfamily:IPR000380 YP_002938024.1 Cytoplasmic, score:8.87; COG1672 Predicted ATPase (AAA+ superfamily); KEGG:0ATPase; HMMPfam:IPR004256; HMMPfam:IPR011579 YP_002938025.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528 YP_002938026.1 Unknown cell location YP_002938027.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate YP_002938028.1 Cytoplasmic, score:8.87; COG0165 Argininosuccinate lyase; KEGG:K01755 argininosuccinate lyase HMMPfam:IPR000362; HMMPanther:IPR009049; HMMTigr:IPR009049; ScanRegExp:IPR000362; superfamily:IPR008948 YP_002938029.1 Cytoplasmic, score:8.87; COG1636 Uncharacterized protein conserved in bacteria; KEGG:K09765 ncharacterized conserved protein; HMMPfam:IPR003828 YP_002938030.1 Cytoplasmic, score:8.87; NOG16889 non supervised orthologous group YP_002938031.1 CytoplasmicMembrane, score:9.99 YP_002938032.1 CytoplasmicMembrane, score:9.99 YP_002938033.1 CytoplasmicMembrane, score:9.82; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K01990 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR001309 YP_002938034.1 Cytoplasmic, score:8.87; COG1725 Predicted transcriptional regulators; KEGG:K07979 predicted transcriptional regulator; HMMPfam:IPR000524; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002938035.1 Unknown cell location YP_002938036.1 Cytoplasmic, score:8.87 YP_002938037.1 Cytoplasmic, score:8.87; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMPfam:IPR013096; Gene3D:IPR014710; HMMSmart:IPR001387; superfamily:IPR010982; superfamily:IPR011051 YP_002938038.1 CytoplasmicMembrane, score:9.49; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; KEGG:K02052 spermidine/putrescine ABC transporter ATPase subunit HMMPfam:IPR003439; HMMPfam:IPR013611; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439; superfamily:IPR008995 YP_002938039.1 CytoplasmicMembrane, score:10.00; COG1176 ABC-type spermidine/putrescine transport system, permease component I; KEGG:K02054 ABC-type spermidine/putrescine transport system, permease protein 1; HMMPfam:IPR000515 YP_002938040.1 CytoplasmicMembrane, score:10.00; COG0687 Spermidine/putrescine-binding periplasmic protein; KEGG:K00611 ornithine carbamoyltransferase HMMPfam:IPR000515; HMMPfam:IPR006059 YP_002938041.1 Unknown cell location YP_002938042.1 Unknown cell location YP_002938043.1 Cytoplasmic, score:8.87; COG0297 Glycogen synthase; KEGG:K00703 glycogen synthase HMMPfam:IPR001296; HMMPfam:IPR013534; HMMTigr:IPR011835 YP_002938044.1 Unknown cell location; COG0784 FOG: CheY-like receiver; KEGG:K07699 Spo0A protein, (CheY-like receiver domain and HTH-type DNA binding domain); HMMPfam:IPR014879; Gene3D:IPR011991 YP_002938045.1 CytoplasmicMembrane, score:10.00; COG1132 ABC-type multidrug transport system, ATPase and permease components; KEGG:K06147 probable ABC transporter; HMMPfam:IPR001140; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938046.1 CytoplasmicMembrane, score:9.99; COG1132 ABC-type multidrug transport system, ATPase and permease components; KEGG:K06147 ABC transporter, ATP-binding/permease protein; HMMPfam:IPR001140; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938047.1 Extracellular, score:9.04; COG3210 Large exoproteins involved in heme utilization or adhesion YP_002938048.1 Unknown cell location; HMMPfam:IPR012902; HMMTigr:IPR012902; ScanRegExp:IPR001120 YP_002938049.1 Unknown cell location; HMMPfam:IPR012902; HMMTigr:IPR012902; ScanRegExp:IPR001120 YP_002938050.1 Cellwall, score:9.26; COG3210 Large exoproteins involved in heme utilization or adhesion YP_002938051.1 Unknown cell location; HMMPfam:IPR012902; HMMTigr:IPR012902 YP_002938052.1 Unknown cell location; KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain YP_002938053.1 Cytoplasmic, score:8.87; COG4972 Tfp pilus assembly protein, ATPase PilM; KEGG:K02662 type IV pilus assembly protein PilM YP_002938054.1 CytoplasmicMembrane, score:10.00; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; KEGG:K02654 prepilin peptidase HMMPfam:IPR000045; HMMPfam:IPR010627 YP_002938055.1 Unknown cell location; COG2165 Type II secretory pathway, pseudopilin PulG; HMMPfam:IPR012902; HMMTigr:IPR012902; ScanRegExp:IPR001120 YP_002938056.1 Extracellular, score:8.82 YP_002938057.1 Cytoplasmic, score:8.87; COG5464 Uncharacterized conserved protein; superfamily:IPR009057 YP_002938058.1 Unknown cell location YP_002938059.1 Unknown cell location YP_002938060.1 Unknown cell location YP_002938061.1 Cytoplasmic, score:8.87 YP_002938062.1 Unknown cell location YP_002938063.1 Cytoplasmic, score:8.87 YP_002938064.1 Cytoplasmic, score:8.87; COG2801 Transposase and inactivated derivatives; KEGG:K07497 hypothetical protein; HMMPfam:IPR001584; superfamily:IPR012337 YP_002938065.1 Cytoplasmic, score:8.87; COG2963 Transposase and inactivated derivatives; KEGG:K07483 hypothetical protein; HMMPfam:IPR002514; superfamily:IPR009057 YP_002938066.1 Cytoplasmic, score:8.87 YP_002938067.1 Unknown cell location YP_002938068.1 CytoplasmicMembrane, score:9.99; COG1459 Type II secretory pathway, component PulF; KEGG:K02653 type II secretion system protein; HMMPfam:IPR001992 YP_002938069.1 Cytoplasmic, score:9.36; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT; KEGG:K02669 predicted ATPase involved in pili biogenesis, PilT homologs; HMMPfam:IPR001482; BlastProDom:IPR001482; HMMTigr:IPR006321; ScanRegExp:IPR001482 YP_002938070.1 Cytoplasmic, score:9.98; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; KEGG:K02652 type II secretion system protein E; HMMPfam:IPR001482; HMMPfam:IPR007831; BlastProDom:IPR001482; ScanRegExp:IPR001482 YP_002938071.1 CytoplasmicMembrane, score:9.99; COG0733 Na+-dependent transporters of the SNF family; KEGG:K03308 sodium-dependent transporter; HMMPfam:IPR000175; HMMPanther:IPR000175 YP_002938072.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 RNA-directed DNA polymerase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002938073.1 Extracellular, score:8.82 YP_002938074.1 Cytoplasmic, score:8.87; COG0685 5,10-methylenetetrahydrofolate reductase; KEGG:K00297 5,10-methylenetetrahydrofolate reductase HMMPfam:IPR003171; HMMTigr:IPR004620 YP_002938075.1 Unknown cell location YP_002938076.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528 YP_002938077.1 Unknown cell location; COG0750 Predicted membrane-associated Zn-dependent proteases 1; KEGG:K06399 stage IV sporulation protein B HMMPfam:IPR008763; superfamily:IPR001478; superfamily:IPR009003 YP_002938078.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli YP_002938079.1 Cytoplasmic, score:8.87; COG0497 ATPase involved in DNA repair; KEGG:K03631 DNA repair ATPase; HMMPfam:IPR003395; HMMTigr:IPR004604; superfamily:IPR009053 YP_002938080.1 Cytoplasmic, score:8.87; COG1438 Arginine repressor; KEGG:K03402 arginine repressor; HMMPfam:IPR001669; BlastProDom:IPR001669; Gene3D:IPR001669; Gene3D:IPR011991; HMMTigr:IPR001669; superfamily:IPR001669 YP_002938081.1 Cytoplasmic, score:8.87; COG0061 Predicted sugar kinase; KEGG:K00858 ATP-NAD kinase HMMPfam:IPR002504; HMMPanther:IPR002504 YP_002938082.1 Cytoplasmic, score:8.87; COG1189 Predicted rRNA methylase; KEGG:K06442 probable hemolysin; HMMPfam:IPR002877; HMMPfam:IPR002942; HMMSmart:IPR002942; HMMTigr:IPR004538 YP_002938083.1 Cytoplasmic, score:8.87; COG1154 Deoxyxylulose-5-phosphate synthase; KEGG:K01662 1-deoxy-D-xylulose-5-phosphate synthase HMMPfam:IPR005475; HMMPfam:IPR005476; Gene3D:IPR015941; HMMTigr:IPR005477; ScanRegExp:IPR005474; ScanRegExp:IPR005475; superfamily:IPR009014 YP_002938084.1 Cytoplasmic, score:9.98; KOG0776 Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; KEGG:K00795 geranyltranstransferase HMMPfam:IPR000092; Gene3D:IPR008949; HMMPanther:IPR000092; ScanRegExp:IPR000092; superfamily:IPR008949 YP_002938085.1 Cytoplasmic, score:8.87; COG1722 Exonuclease VII small subunit; BlastProDom:IPR003761 YP_002938086.1 Cytoplasmic, score:8.87; COG1570 Exonuclease VII, large subunit; KEGG:K01145 exodeoxyribonuclease VII, large subunit HMMPfam:IPR003753; HMMPfam:IPR004365; HMMTigr:IPR003753 YP_002938087.1 Cytoplasmic, score:8.87; COG0781 Transcription termination factor; KEGG:K03625 NusB antitermination factor; HMMPfam:IPR006027; Gene3D:IPR006027; HMMTigr:IPR011605 YP_002938088.1 Unknown cell location; COG1302 Uncharacterized protein conserved in bacteria; HMMPfam:IPR005531 YP_002938089.1 Cytoplasmic, score:8.87; COG0448 ADP-glucose pyrophosphorylase; KEGG:K00975 glucose-1-phosphate adenylyltransferase, GlgD subunit HMMPfam:IPR005835; HMMPanther:IPR011832; HMMTigr:IPR011832 YP_002938090.1 Cytoplasmic, score:8.87; COG0448 ADP-glucose pyrophosphorylase; KEGG:K00975 ADP-glucose pyrophosphorylase HMMPfam:IPR005835; HMMTigr:IPR011831; ScanRegExp:IPR005836; superfamily:IPR011004 YP_002938091.1 Cytoplasmic, score:8.87; COG1897 Homoserine trans-succinylase; KEGG:K00651 homoserine O-succinyltransferase HMMPfam:IPR005697; BlastProDom:IPR005697; HMMPIR:IPR005697; HMMPanther:IPR005697; HMMTigr:IPR005697 YP_002938092.1 Cytoplasmic, score:8.87; COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); KEGG:K01972 DNA ligase, NAD-dependent HMMPfam:IPR001357; HMMPfam:IPR004150; HMMPfam:IPR013839; BlastProDom:IPR004150; Gene3D:IPR012340; HMMSmart:IPR001357; HMMSmart:IPR013840; superfamily:IPR010994 YP_002938093.1 Cytoplasmic, score:8.87; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; KEGG:K06182 pseudouridylate synthase HMMPfam:IPR002942; HMMPfam:IPR006145; HMMSmart:IPR002942; HMMTigr:IPR000748; ScanRegExp:IPR000748 YP_002938094.1 Cellwall, score:9.25; COG5295 Autotransporter adhesin; HMMPfam:IPR013247 YP_002938095.1 Extracellular, score:8.82 YP_002938096.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_002938097.1 Cytoplasmic, score:8.87; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:K01515 NUDIX hydrolase HMMPfam:IPR000086; Gene3D:IPR000086; superfamily:IPR015797 YP_002938098.1 Cytoplasmic, score:9.98; COG1454 Alcohol dehydrogenase, class IV; KEGG:0NADPH-dependent butanol dehydrogenase HMMPfam:IPR001670; ScanRegExp:IPR001670 YP_002938099.1 Unknown cell location; COG1418 Predicted HD superfamily hydrolase; KEGG:0metal dependent phosphohydrolase; HMMPfam:IPR004088; HMMPfam:IPR006674; HMMSmart:IPR003607; HMMSmart:IPR004087; HMMTigr:IPR006675 YP_002938100.1 Cytoplasmic, score:8.87; COG2137 Uncharacterized protein conserved in bacteria; KEGG:K03565 recombination regulator RecX; HMMPfam:IPR003783 YP_002938101.1 Cytoplasmic, score:8.87; COG0468 RecA/RadA recombinase; KEGG:K01537 RecA protein HMMPfam:IPR013765; BlastProDom:IPR001553; HMMPanther:IPR013765; HMMSmart:IPR003593; HMMTigr:IPR001553; ScanRegExp:IPR001553 YP_002938102.1 Cytoplasmic, score:9.98; COG4108 Peptide chain release factor RF-3; KEGG:K02837 peptide chain release factor 3; HMMPfam:IPR000795; HMMPfam:IPR004161; HMMTigr:IPR004548; HMMTigr:IPR005225; ScanRegExp:IPR000795; superfamily:IPR009000; superfamily:IPR009022 YP_002938103.1 Cytoplasmic, score:8.87; NOG17862 non supervised orthologous group YP_002938104.1 Unknown cell location; NOG11553 non supervised orthologous group YP_002938105.1 Unknown cell location YP_002938106.1 CytoplasmicMembrane, score:9.99; NOG06161 non supervised orthologous group; KEGG:K06394 hypothetical protein YP_002938107.1 CytoplasmicMembrane, score:9.75; NOG13205 non supervised orthologous group; KEGG:K06393 putative sporulation protein YP_002938108.1 CytoplasmicMembrane, score:9.75; NOG17863 non supervised orthologous group; HMMPfam:IPR009570; HMMTigr:IPR009570 YP_002938109.1 Cytoplasmic, score:8.87; superfamily:IPR009057 YP_002938110.1 Cytoplasmic, score:8.87; COG3854 Uncharacterized protein conserved in bacteria; KEGG:K06390 stage III sporulation protein AA YP_002938111.1 Extracellular, score:8.82 YP_002938112.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_002938113.1 CytoplasmicMembrane, score:9.99; NOG18656 non supervised orthologous group YP_002938114.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin YP_002938115.1 Cytoplasmic, score:8.87; COG2206 HD-GYP domain; KEGG:K07814 response regulator; HMMPfam:IPR006674; HMMSmart:IPR003607; ScanRegExp:IPR013838 YP_002938116.1 CytoplasmicMembrane, score:9.99; COG4708 Predicted membrane protein; HMMPfam:IPR010387 YP_002938117.1 Cytoplasmic, score:8.87; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing; KEGG:K07576 predicted exonuclease of the beta-lactamase fold involved in RNA processing; HMMPfam:IPR001279; HMMPfam:IPR011108 YP_002938118.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation YP_002938119.1 CytoplasmicMembrane, score:9.26 YP_002938120.1 Cytoplasmic, score:8.87; COG0206 Cell division GTPase; KEGG:K03531 cell division protein ftsZ; HMMPfam:IPR003008; HMMPfam:IPR008280; HMMTigr:IPR000158; ScanRegExp:IPR000158 YP_002938121.1 CytoplasmicMembrane, score:9.98; COG1589 Cell division septal protein; HMMPfam:IPR013685 YP_002938122.1 CytoplasmicMembrane, score:10.00; COG0772 Bacterial cell division membrane protein; KEGG:K03588 bacterial cell division membrane protein; HMMPfam:IPR001182 YP_002938123.1 Cytoplasmic, score:9.98; COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG:K01925 UDP-N-acetylmuramoylalanine-D-glutamate ligase HMMPfam:IPR004101; HMMPfam:IPR013221; HMMTigr:IPR005762 YP_002938124.1 CytoplasmicMembrane, score:9.49; COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG:K05364 peptidoglycan glycosyltransferase HMMPfam:IPR001460; HMMPfam:IPR005311; superfamily:IPR005311; superfamily:IPR012338 YP_002938125.1 CytoplasmicMembrane, score:9.83; COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG:K05364 peptidoglycan glycosyltransferase HMMPfam:IPR001460; HMMPfam:IPR005311; ScanRegExp:IPR002345; superfamily:IPR005311; superfamily:IPR012338 YP_002938126.1 Unknown cell location YP_002938127.1 Cytoplasmic, score:9.98; COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; KEGG:K03438 S-adenosyl-methyltransferase MraW HMMPfam:IPR002903; BlastProDom:IPR002903; HMMPanther:IPR002903; HMMTigr:IPR002903 YP_002938128.1 similar to YLLB B.subtilis family; Cytoplasmic, score:8.87; COG2001 Uncharacterized protein conserved in bacteria; KEGG:K03925 uncharacterized conserved protein, YLLB B.subtilis family; HMMPfam:IPR003444; BlastProDom:IPR003444; HMMTigr:IPR003444 YP_002938129.1 Unknown cell location YP_002938130.1 CytoplasmicMembrane, score:10.00; COG0682 Prolipoprotein diacylglyceryltransferase; KEGG:0prolipoprotein diacylglyceryl transferase HMMPfam:IPR001640; HMMTigr:IPR001640 YP_002938131.1 Cytoplasmic, score:8.87; NOG16856 non supervised orthologous group; HMMPfam:IPR011437 YP_002938132.1 Cytoplasmic, score:10.00; COG0441 Threonyl-tRNA synthetase; KEGG:K01868 threonyl-tRNA synthetase HMMPfam:IPR002314; HMMPfam:IPR004095; HMMPfam:IPR004154; HMMPfam:IPR012947; Gene3D:IPR004154; Gene3D:IPR012675; HMMTigr:IPR002320; superfamily:IPR004154; superfamily:IPR012676 YP_002938133.1 Unknown cell location YP_002938134.1 Cytoplasmic, score:8.87; COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); HMMPfam:IPR004027 YP_002938135.1 Unknown cell location YP_002938136.1 Cytoplasmic, score:8.87 YP_002938137.1 CytoplasmicMembrane, score:10.00; COG0474 Cation transport ATPase; KEGG:0cation-transporting ATPase, E1-E2 family HMMPfam:IPR005834; HMMPfam:IPR008250; HMMPanther:IPR001757; HMMTigr:IPR001757; ScanRegExp:IPR001757 YP_002938138.1 Unknown cell location; COG5295 Autotransporter adhesin YP_002938139.1 CytoplasmicMembrane, score:9.99; COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component; KEGG:K01992 ABC-type transport system involved in multi-copper enzyme maturation, permease component; HMMPfam:IPR013525 YP_002938140.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 ABC-type multidrug transport system, ATPase component; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002938141.1 Cytoplasmic, score:8.87; COG0104 Adenylosuccinate synthase; KEGG:K01939 adenylosuccinate synthase HMMPfam:IPR001114; BlastProDom:IPR001114; HMMPanther:IPR001114; HMMSmart:IPR001114; HMMTigr:IPR001114; ScanRegExp:IPR001114 YP_002938142.1 Cytoplasmic, score:8.87; COG1307 Uncharacterized protein conserved in bacteria; KEGG:0DAK2 domain/DegV family protein; HMMPfam:IPR003797; HMMTigr:IPR003797 YP_002938143.1 Cytoplasmic, score:9.98; COG0459 Chaperonin GroEL (HSP60 family); KEGG:K04077 chaperonin GroEL; HMMPfam:IPR002423; HMMPanther:IPR002423; HMMTigr:IPR012723; ScanRegExp:IPR001844; superfamily:IPR008950 YP_002938144.1 Cytoplasmic, score:9.98; COG0234 Co-chaperonin GroES (HSP10); KEGG:K04078 co-chaperonin GroES; HMMPfam:IPR001476; BlastProDom:IPR001476; Gene3D:IPR001476; HMMPanther:IPR001476; ScanRegExp:IPR001476; superfamily:IPR011032 YP_002938145.1 YkrA B.subtilis ortholog; Cytoplasmic, score:8.87; COG0561 Predicted hydrolases of the HAD superfamily; KEGG:0HAD superfamily hydrolases, YkrA B.subtilis ortholog; HMMPfam:IPR013200; HMMTigr:IPR000150; HMMTigr:IPR006379; ScanRegExp:IPR000150 YP_002938146.1 Cytoplasmic, score:9.98; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; KEGG:K00266 glutamate synthase, small subunit HMMPfam:IPR013027; Gene3D:IPR012285; HMMTigr:IPR006005; superfamily:IPR009051 YP_002938147.1 Cytoplasmic, score:8.87; COG0069 Glutamate synthase domain 2; KEGG:K00284 glutamate synthase (ferredoxin) HMMPfam:IPR000583; HMMPfam:IPR002489; HMMPfam:IPR002932; HMMPfam:IPR006982; Gene3D:IPR002489; Gene3D:IPR013785; superfamily:IPR002489 YP_002938148.1 CytoplasmicMembrane, score:9.99; COG1266 Predicted metal-dependent membrane protease; KEGG:0CAAX amino terminal protease family protein; HMMPfam:IPR003675 YP_002938149.1 Cytoplasmic, score:8.87; COG0546 Predicted phosphatases; KEGG:K01091 predicted phosphatase, HAD family HMMPfam:IPR005834 YP_002938150.1 Cytoplasmic, score:8.87; COG4548 Nitric oxide reductase activation protein YP_002938151.1 Cytoplasmic, score:8.87; COG0714 MoxR-like ATPases; KEGG:K04748 probable nitric-oxide reductase HMMPfam:IPR011704 YP_002938152.1 Cytoplasmic, score:8.87; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; KEGG:K02469 DNA topoisomerase (ATP-hydrolyzing) HMMPfam:IPR002205; HMMPfam:IPR006691; BlastProDom:IPR002205; Gene3D:IPR013757; Gene3D:IPR013758; HMMSmart:IPR002205; superfamily:IPR013760 YP_002938153.1 Cytoplasmic, score:8.87; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; KEGG:K02470 DNA topoisomerase (ATP-hydrolyzing) HMMPfam:IPR002288; HMMPfam:IPR003594; HMMPfam:IPR006171; HMMPfam:IPR013506; BlastProDom:IPR011558; Gene3D:IPR003594; Gene3D:IPR013759; HMMSmart:IPR001241; HMMSmart:IPR003594; ScanRegExp:IPR001241; superfamily:IPR003594; superfamily:IPR013760 YP_002938154.1 Cytoplasmic, score:8.87; COG3835 Sugar diacid utilization regulator; KEGG:K02647 transcriptional regulator, CdaR; superfamily:IPR009057 YP_002938155.1 CytoplasmicMembrane, score:9.49; COG3839 ABC-type sugar transport systems, ATPase components; KEGG:K10112 ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems, ATPase component; HMMPfam:IPR003439; HMMPfam:IPR013611; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439; superfamily:IPR008995 YP_002938156.1 Cytoplasmic, score:8.87 YP_002938157.1 Cytoplasmic, score:8.87; COG0756 dUTPase; KEGG:K01520 deoxyuridine 5-triphosphate nucleotidohydrolase Dut HMMPfam:IPR008180; BlastProDom:IPR003232; HMMTigr:IPR008181 YP_002938158.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_002938159.1 CytoplasmicMembrane, score:9.99; COG0344 Predicted membrane protein; KEGG:K08591 hypothetical protein; HMMPfam:IPR003811; HMMTigr:IPR003811 YP_002938160.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002938161.1 CytoplasmicMembrane, score:9.99 YP_002938162.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 ABC transporter (ATP-binding protein); HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR001579 YP_002938163.1 Cytoplasmic, score:8.87; COG1725 Predicted transcriptional regulators; KEGG:K07979 transcriptional regulator, GntR family; HMMPfam:IPR000524; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002938164.1 Cytoplasmic, score:8.87; COG1496 Uncharacterized conserved protein; KEGG:K05810 protein of unknown function DUF152; HMMPfam:IPR003730; Gene3D:IPR003730; HMMTigr:IPR003730; superfamily:IPR011324 YP_002938165.1 Cytoplasmic, score:8.87; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; KEGG:K07460 conserved hypothetical protein TIGR00252; HMMPfam:IPR003509; HMMTigr:IPR003509; superfamily:IPR011335 YP_002938166.1 Cytoplasmic, score:8.87; COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; KEGG:K04061 flagellar biosynthesis; HMMPfam:IPR006135 YP_002938167.1 Cytoplasmic, score:8.87; NOG37222 non supervised orthologous group YP_002938168.1 Cytoplasmic, score:8.87; NOG19155 non supervised orthologous group YP_002938169.1 Cytoplasmic, score:8.87; COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif; HMMPfam:IPR007197 YP_002938170.1 Cytoplasmic, score:8.87; COG0657 Esterase/lipase; KEGG:0probable lipase/esterase HMMPfam:IPR001375 YP_002938171.1 Extracellular, score:8.82 YP_002938172.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002938173.1 Unknown cell location YP_002938174.1 Cytoplasmic, score:9.98; COG0542 ATPases with chaperone activity, ATP-binding subunit; KEGG:K03696 ATPase AAA-2; HMMPfam:IPR003959; HMMPfam:IPR004176; HMMPfam:IPR013093; HMMSmart:IPR003593; ScanRegExp:IPR001270 YP_002938175.1 Cellwall, score:9.26; COG3291 FOG: PKD repeat; ScanRegExp:IPR002048 YP_002938176.1 Extracellular, score:9.98; COG4193 Beta- N-acetylglucosaminidase; KEGG:K01227 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HMMPfam:IPR002105; ScanRegExp:IPR002048; ScanRegExp:IPR002105 YP_002938177.1 Extracellular, score:8.82 YP_002938178.1 Unknown cell location; COG4086 Predicted secreted protein; HMMPfam:IPR009343 YP_002938179.1 Cytoplasmic, score:8.87; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF; KEGG:K01297 muramoyltetrapeptide carboxypeptidase HMMPfam:IPR003507 YP_002938180.1 Unknown cell location YP_002938181.1 Cytoplasmic, score:8.87; COG1313 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins; KEGG:K04070 uncharacterized Fe-S protein, PflX (pyruvate formate lyase activating protein) homolog YP_002938182.1 Cytoplasmic, score:8.87; COG0205 6-phosphofructokinase; KEGG:K00850 6-phosphofructokinase HMMPfam:IPR000023; BlastProDom:IPR015913; HMMPIR:IPR011404; HMMPanther:IPR000023 YP_002938183.1 Unknown cell location; COG1376 Uncharacterized protein conserved in bacteria; HMMPfam:IPR005490 YP_002938184.1 Extracellular, score:8.82 YP_002938185.1 Unknown cell location; HMMPfam:IPR002104; superfamily:IPR011010 YP_002938186.1 Unknown cell location YP_002938187.1 Unknown cell location YP_002938188.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07670 DNA-binding response regulator; HMMPfam:IPR001789; BlastProDom:IPR001789; superfamily:IPR011006 YP_002938189.1 Unknown cell location YP_002938190.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 RNA-directed DNA polymerase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002938191.1 Extracellular, score:8.82 YP_002938192.1 Cytoplasmic, score:8.87 YP_002938193.1 CytoplasmicMembrane, score:10.00; COG1132 ABC-type multidrug transport system, ATPase and permease components; KEGG:K06147 ABC transporter, ATP-binding/permease protein; HMMPfam:IPR001140; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002938194.1 CytoplasmicMembrane, score:10.00; COG1132 ABC-type multidrug transport system, ATPase and permease components; KEGG:K06148 ABC transporter, ATP-binding / permease protein; HMMPfam:IPR001140; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938195.1 Unknown cell location YP_002938196.1 Cytoplasmic, score:8.87; COG1321 Mn-dependent transcriptional regulator; KEGG:K03709 iron dependent repressor; HMMPfam:IPR001367; Gene3D:IPR011991; HMMSmart:IPR001367; superfamily:IPR001367 YP_002938197.1 Cytoplasmic, score:8.87; COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; KEGG:K00842 aminotransferase HMMPfam:IPR004839; Gene3D:IPR015421; superfamily:IPR015424 YP_002938198.1 Cytoplasmic, score:8.87; NOG11522 non supervised orthologous group; KEGG:0hydrogenase-4 component C superfamily:IPR011050 YP_002938199.1 Cytoplasmic, score:9.98; COG0039 Malate/lactate dehydrogenases; KEGG:K00016 L-lactate dehydrogenase HMMPfam:IPR001236; Gene3D:IPR015955; HMMPIR:IPR001557; HMMTigr:IPR011304; ScanRegExp:IPR011304; superfamily:IPR015955 YP_002938200.1 Cytoplasmic, score:8.87; COG0119 Isopropylmalate/homocitrate/citramalate synthases; KEGG:K01649 2-isopropylmalate synthase HMMPfam:IPR000005; HMMPfam:IPR000891; HMMPfam:IPR013709; Gene3D:IPR012287; Gene3D:IPR013785; HMMPanther:IPR005668; HMMSmart:IPR000005; ScanRegExp:IPR000005; ScanRegExp:IPR002034; superfamily:IPR009057 YP_002938201.1 Cytoplasmic, score:8.87; COG1307 Uncharacterized protein conserved in bacteria; KEGG:0DegV protein; HMMPfam:IPR003797; HMMTigr:IPR003797 YP_002938202.1 Cytoplasmic, score:8.87; COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases; KEGG:0acetyltransferase, GNAT family HMMPfam:IPR000182 YP_002938203.1 Cytoplasmic, score:8.87; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; KEGG:K02488 PleD gene product; HMMPfam:IPR000160; HMMSmart:IPR000160; HMMTigr:IPR000160 YP_002938204.1 Cytoplasmic, score:8.87; COG1564 Thiamine pyrophosphokinase; KEGG:K00949 thiamin pyrophosphokinase HMMPfam:IPR007371; BlastProDom:IPR002826; HMMTigr:IPR006282 YP_002938205.1 Cytoplasmic, score:8.87; COG0036 Pentose-5-phosphate-3-epimerase; KEGG:K01783 ribulose-phosphate 3-epimerase HMMPfam:IPR000056; Gene3D:IPR013785; HMMPanther:IPR000056; HMMTigr:IPR000056; superfamily:IPR011060 YP_002938206.1 Cytoplasmic, score:8.87; COG1162 Predicted GTPases; KEGG:K06949 GTPase HMMPfam:IPR004881; HMMTigr:IPR004881 YP_002938207.1 Unknown cell location YP_002938208.1 CytoplasmicMembrane, score:9.49; COG2815 Uncharacterized protein conserved in bacteria; KEGG:K08884 protein kinase HMMPfam:IPR000719; HMMPfam:IPR005543; BlastProDom:IPR000719; HMMSmart:IPR001245; HMMSmart:IPR002290; HMMSmart:IPR005543; ScanRegExp:IPR000719; ScanRegExp:IPR008271; superfamily:IPR011009 YP_002938209.1 Unknown cell location; COG0631 Serine/threonine protein phosphatase; KEGG:K01090 protein serine/threonine phosphatase HMMPfam:IPR014045; HMMPanther:IPR015655; HMMSmart:IPR001932 YP_002938210.1 Cytoplasmic, score:8.87; COG0820 Predicted Fe-S-cluster redox enzyme; KEGG:0radical SAM enzyme, Cfr family; HMMPfam:IPR007197; HMMTigr:IPR004383 YP_002938211.1 Cytoplasmic, score:8.87; COG0144 tRNA and rRNA cytosine-C5-methylases; KEGG:K03500 sun protein HMMPfam:IPR001678; HMMPfam:IPR006027; BlastProDom:IPR006174; Gene3D:IPR006027; HMMTigr:IPR004573 YP_002938212.1 CytoplasmicMembrane, score:9.26; COG2738 Predicted Zn-dependent protease; KEGG:0predicted Zn-dependent protease; HMMPfam:IPR007395 YP_002938213.1 Cytoplasmic, score:8.87; COG0223 Methionyl-tRNA formyltransferase; KEGG:K00604 methionyl-tRNA formyltransferase HMMPfam:IPR002376; HMMPfam:IPR005793; Gene3D:IPR002376; Gene3D:IPR005793; HMMPanther:IPR015518; HMMTigr:IPR005794; ScanRegExp:IPR001555; superfamily:IPR002376; superfamily:IPR011034 YP_002938214.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_002938215.1 Cytoplasmic, score:8.87; COG1198 Primosomal protein N (replication factor Y) - superfamily II helicase; KEGG:K04066 primosomal protein N (replication factor Y) - superfamily II helicase; HMMPfam:IPR001650; HMMPfam:IPR006935; HMMSmart:IPR001650; HMMSmart:IPR014001; HMMTigr:IPR005259 YP_002938216.1 involved in the allosteric regulation of aspartate carbamoyltransferase YP_002938217.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_002938218.1 Unknown cell location; HMMPfam:IPR005182 YP_002938219.1 Cytoplasmic, score:9.65; COG2214 DnaJ-class molecular chaperone; KEGG:K03686 chaperone protein DnaJ; HMMPfam:IPR001623; HMMPfam:IPR013105; Gene3D:IPR001623; HMMPanther:IPR015609; HMMSmart:IPR001623; superfamily:IPR001623 YP_002938220.1 Cytoplasmic, score:8.87; NOG23778 non supervised orthologous group YP_002938221.1 Unknown cell location; NOG18757 non supervised orthologous group YP_002938222.1 Cytoplasmic, score:8.87; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_002938223.1 Cytoplasmic, score:8.87; COG0572 Uridine kinase; KEGG:K00876 uridine kinase HMMPfam:IPR004095; HMMPfam:IPR006083; Gene3D:IPR012675; HMMSmart:IPR003593; superfamily:IPR012676 YP_002938224.1 Cytoplasmic, score:8.87; COG2384 Predicted SAM-dependent methyltransferase; KEGG:0hypothetical protein; HMMPfam:IPR006901 YP_002938225.1 Cytoplasmic, score:9.98; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); KEGG:K03086 RNA polymerase sigma factor RpoD; HMMPfam:IPR007624; HMMPfam:IPR007627; HMMPfam:IPR007630; HMMPfam:IPR009042; Gene3D:IPR011991; HMMTigr:IPR012760; HMMTigr:IPR014284; ScanRegExp:IPR000943; superfamily:IPR013324; superfamily:IPR013325 YP_002938226.1 Cytoplasmic, score:8.87; COG0358 DNA primase (bacterial type); KEGG:K02316 DNA primase HMMPfam:IPR002694; HMMPfam:IPR006171; HMMPfam:IPR013264; BlastProDom:IPR002694; BlastProDom:IPR006647; Gene3D:IPR002694; Gene3D:IPR013264; HMMSmart:IPR002694; HMMSmart:IPR006154; HMMTigr:IPR006295 YP_002938227.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_002938228.1 CytoplasmicMembrane, score:9.99 YP_002938229.1 Cytoplasmic, score:8.87; COG2008 Threonine aldolase; KEGG:K01620 low specificity L-threonine aldolase HMMPfam:IPR001597; Gene3D:IPR015421; Gene3D:IPR015422; superfamily:IPR015424 YP_002938230.1 Extracellular, score:8.82 YP_002938231.1 Cytoplasmic, score:8.87; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; HMMPfam:IPR000182 YP_002938232.1 Cytoplasmic, score:8.87; NOG30329 non supervised orthologous group; HMMPfam:IPR011664 YP_002938233.1 Cytoplasmic, score:8.87; NOG22903 non supervised orthologous group; KEGG:K07726 hypothetical protein; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002938234.1 Extracellular, score:8.82 YP_002938235.1 Cytoplasmic, score:8.87; COG1432 Uncharacterized conserved protein YP_002938236.1 CytoplasmicMembrane, score:9.99; NOG17748 non supervised orthologous group YP_002938237.1 Unknown cell location; COG1695 Predicted transcriptional regulators; HMMPfam:IPR005149; Gene3D:IPR011991 YP_002938238.1 Unknown cell location YP_002938239.1 Cytoplasmic, score:8.87; COG0249 Mismatch repair ATPase (MutS family); KEGG:K03555 DNA mismatch repair protein; HMMPfam:IPR000432; BlastProDom:IPR000432; HMMPanther:IPR000432; HMMSmart:IPR000432 YP_002938240.1 Unknown cell location YP_002938241.1 Unknown cell location; COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; KEGG:K07814 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain YP_002938242.1 Cytoplasmic, score:8.87; COG2199 FOG: GGDEF domain; KEGG:K01745 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) HMMPfam:IPR000160; HMMPfam:IPR001633; HMMSmart:IPR000160; HMMSmart:IPR001633; HMMTigr:IPR000160 YP_002938243.1 Cytoplasmic, score:8.87; COG1041 Predicted DNA modification methylase; HMMPfam:IPR000241 YP_002938244.1 Cytoplasmic, score:8.87; COG5632 N-acetylmuramoyl-L-alanine amidase; KEGG:K01447 N-acetylmuramoyl-L-alanine amidase HMMPfam:IPR002502; HMMSmart:IPR002502 YP_002938245.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_002938246.1 similar to pip phage infection protein of L. lacis; CytoplasmicMembrane, score:10.00; COG1511 Predicted membrane protein; KEGG:K01421 hypothetical protein with similarity to pip phage infection protein of L. lactis; HMMPfam:IPR013525; superfamily:IPR010989 YP_002938247.1 Cytoplasmic, score:8.87 YP_002938248.1 CytoplasmicMembrane, score:10.00; COG1511 Predicted membrane protein; KEGG:K01421 hypothetical protein YP_002938249.1 Cytoplasmic, score:8.87; COG0285 Folylpolyglutamate synthase; KEGG:K01930 folylpolyglutamate synthase HMMPfam:IPR004101; HMMPfam:IPR013221; HMMPanther:IPR001645; HMMTigr:IPR001645 YP_002938250.1 Cytoplasmic, score:8.87; COG1307 Uncharacterized protein conserved in bacteria; KEGG:0DAK2 domain/DegV family protein; HMMPfam:IPR003797 YP_002938251.1 catalyzes the removal of amino acids from the N termini of peptides YP_002938252.1 Unknown cell location YP_002938253.1 Cytoplasmic, score:9.98; COG1278 Cold shock proteins; KEGG:K03704 putative cold-shock DNA-binding domain protein; HMMPfam:IPR002059; BlastProDom:IPR002059; Gene3D:IPR012340; HMMPIR:IPR012156; HMMSmart:IPR011129; ScanRegExp:IPR002059 YP_002938254.1 Cellwall, score:9.17; NOG16062 non supervised orthologous group; KEGG:0peptidoglycan N-acetylglucosamine deacetylase HMMPfam:IPR002509; HMMPfam:IPR003410; superfamily:IPR011330 YP_002938255.1 Cytoplasmic, score:8.87; COG4624 Iron only hydrogenase large subunit, C-terminal domain; KEGG:K00532 ferredoxin hydrogenase HMMPfam:IPR001450; HMMPfam:IPR004108; ScanRegExp:IPR001450; superfamily:IPR009016 YP_002938256.1 CytoplasmicMembrane, score:9.99; COG0577 ABC-type antimicrobial peptide transport system, permease component; KEGG:0hypothetical protein; HMMPfam:IPR003838 YP_002938257.1 Unknown cell location; COG0845 Membrane-fusion protein; KEGG:K02005 hypothetical protein YP_002938258.1 CytoplasmicMembrane, score:9.49; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:K09810 ABC transporter (ATP-binding protein) HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938259.1 Unknown cell location; COG0845 Membrane-fusion protein; KEGG:K02005 ABC transporter; HMMPfam:IPR000089; HMMTigr:IPR006143 YP_002938260.1 Extracellular, score:9.55; COG1404 Subtilisin-like serine proteases; KEGG:0subtilase family protein HMMPfam:IPR000209; Gene3D:IPR000209; HMMPanther:IPR015500; ScanRegExp:IPR000209; superfamily:IPR000209 YP_002938261.1 Unknown cell location YP_002938262.1 CytoplasmicMembrane, score:9.99; COG0530 Ca2+/Na+ antiporter; KEGG:0putative transmembrane K+ dependent Na+/Ca+ exchanger-related protein; HMMPfam:IPR004837; HMMPanther:IPR004481; HMMTigr:IPR004481 YP_002938263.1 Extracellular, score:8.82 YP_002938264.1 CytoplasmicMembrane, score:10.00; COG0591 Na+/proline symporter; KEGG:K03307 sodium/proline symporter; HMMPfam:IPR001734; HMMPanther:IPR001734; HMMTigr:IPR001734; ScanRegExp:IPR001734 YP_002938265.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates YP_002938266.1 Cytoplasmic, score:8.87; NOG16844 non supervised orthologous group; HMMPfam:IPR000835; Gene3D:IPR011991; HMMSmart:IPR000835 YP_002938267.1 CytoplasmicMembrane, score:10.00; COG1132 ABC-type multidrug transport system, ATPase and permease components; KEGG:K06147 ABC-type multidrug/protein/lipid transport system, ATPase component; HMMPfam:IPR001140; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938268.1 CytoplasmicMembrane, score:9.99; COG1132 ABC-type multidrug transport system, ATPase and permease components; KEGG:K06147 ABC-type multidrug/protein/lipid transport system, ATPase component; HMMPfam:IPR001140; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938269.1 Extracellular, score:8.82 YP_002938270.1 Cytoplasmic, score:8.87; COG0388 Predicted amidohydrolase; KEGG:K01916 NAD synthetase HMMPfam:IPR003010; HMMPfam:IPR003694; Gene3D:IPR003010; Gene3D:IPR014729; HMMPIR:IPR014445; HMMTigr:IPR003694; superfamily:IPR003010 YP_002938271.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate YP_002938272.1 Cytoplasmic, score:8.87; COG1335 Amidases related to nicotinamidase; Gene3D:IPR000868; superfamily:IPR000868 YP_002938273.1 Cytoplasmic, score:8.87; COG1051 ADP-ribose pyrophosphatase; KEGG:K01515 MutT/NUDIX family protein HMMPfam:IPR000086; HMMPfam:IPR004820; Gene3D:IPR000086; Gene3D:IPR014729; HMMTigr:IPR004821; ScanRegExp:IPR000086; superfamily:IPR015797 YP_002938274.1 Extracellular, score:8.82 YP_002938275.1 Unknown cell location; COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; KEGG:K01153 type I restriction-modification system R subunit (endonuclease) HMMPfam:IPR001650; HMMPfam:IPR006935; HMMPfam:IPR007409; HMMSmart:IPR014001 YP_002938276.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002938277.1 CytoplasmicMembrane, score:9.75; COG0732 Restriction endonuclease S subunits; KEGG:K01154 restriction modification system, type I HMMPfam:IPR000055 YP_002938278.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K03733 site-specific recombinase, phage integrase family; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002938279.1 Cytoplasmic, score:8.87; NOG19557 non supervised orthologous group; KEGG:0nucleotidyltransferase HMMPfam:IPR010235; HMMTigr:IPR010235 YP_002938280.1 Cytoplasmic, score:8.87; NOG20560 non supervised orthologous group; KEGG:0predicted nucleotidyltransferase; HMMPfam:IPR002934 YP_002938281.1 Cytoplasmic, score:8.87; COG0732 Restriction endonuclease S subunits; KEGG:K01154 type I restriction enzyme EcoEI specificity protein HMMPfam:IPR000055 YP_002938282.1 Cytoplasmic, score:8.87; COG0286 Type I restriction-modification system methyltransferase subunit; KEGG:K03427 type I restriction modification system M subunit (site-specific DNA-methyltransferase subunit) HMMPfam:IPR003356; ScanRegExp:IPR002052 YP_002938283.1 Cytoplasmic, score:9.98; COG0657 Esterase/lipase; KEGG:K01066 putative acetyl-hydrolase HMMPfam:IPR013094; ScanRegExp:IPR001547; ScanRegExp:IPR002168 YP_002938284.1 CytoplasmicMembrane, score:9.99 YP_002938285.1 Unknown cell location; NOG32388 non supervised orthologous group YP_002938286.1 Cytoplasmic, score:8.87; NOG32388 non supervised orthologous group YP_002938287.1 Cytoplasmic, score:8.87; COG2262 GTPases; KEGG:K03665 small GTP-binding protein domain; HMMPfam:IPR002917; HMMTigr:IPR005225 YP_002938288.1 Unknown cell location; COG0457 FOG: TPR repeat; HMMPfam:IPR001440; HMMPfam:IPR013105; Gene3D:IPR011990; HMMSmart:IPR013026 YP_002938289.1 Unknown cell location YP_002938290.1 Cytoplasmic, score:8.87 YP_002938291.1 Cytoplasmic, score:8.87; COG0058 Glucan phosphorylase; KEGG:K00688 glycogen/starch/alpha-glucan phosphorylase HMMPfam:IPR000811; HMMPIR:IPR000811; HMMPanther:IPR000811; HMMTigr:IPR011833; ScanRegExp:IPR000811 YP_002938292.1 Cytoplasmic, score:9.98; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K02854 L-rhamnose operon transcriptional activator; HMMPfam:IPR000005; HMMPfam:IPR003313; Gene3D:IPR012287; HMMSmart:IPR000005; superfamily:IPR003313; superfamily:IPR009057 YP_002938293.1 CytoplasmicMembrane, score:9.99; COG0671 Membrane-associated phospholipid phosphatase; KEGG:K01094 phosphatidylglycerophosphatase B HMMPfam:IPR000326; HMMSmart:IPR000326; superfamily:IPR000326 YP_002938295.1 Unknown cell location; KOG4744 Uncharacterized conserved protein; BlastProDom:IPR008165 YP_002938296.1 CytoplasmicMembrane, score:9.99; NOG13202 non supervised orthologous group; KEGG:K06407 sporulation protein; HMMPfam:IPR005562 YP_002938297.1 Unknown cell location; NOG06312 non supervised orthologous group; KEGG:K06406 stage V sporulation protein AD; HMMPfam:IPR010894 YP_002938298.1 Cytoplasmic, score:9.98; COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; KEGG:K00759 adenine phosphoribosyltransferase HMMPfam:IPR000836; HMMTigr:IPR005764; ScanRegExp:IPR002375 YP_002938299.1 Cytoplasmic, score:8.87; COG1720 Uncharacterized conserved protein; HMMPfam:IPR001378; BlastProDom:IPR001378; HMMTigr:IPR001378; ScanRegExp:IPR001378 YP_002938300.1 Cytoplasmic, score:8.87; COG0371 Glycerol dehydrogenase and related enzymes; KEGG:K00096 glycerol-1-phosphate dehydrogenase (NAD(P)(+)) HMMPfam:IPR002658 YP_002938301.1 Cytoplasmic, score:8.87; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; KEGG:K01745 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) HMMPfam:IPR000160; HMMSmart:IPR000160; HMMTigr:IPR000160; ScanRegExp:IPR002345 YP_002938302.1 Cytoplasmic, score:8.87; COG4286 Uncharacterized conserved protein related to MYG1 family; HMMPfam:IPR003226; BlastProDom:IPR003226; HMMPanther:IPR003226 YP_002938303.1 Unknown cell location; COG1725 Predicted transcriptional regulators; KEGG:K07979 transcriptional regulator, GntR family; HMMPfam:IPR000524; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002938304.1 CytoplasmicMembrane, score:9.99; COG4194 Predicted membrane protein YP_002938305.1 Cytoplasmic, score:8.87; COG0350 Methylated DNA-protein cysteine methyltransferase; KEGG:0endonuclease V related protein HMMPfam:IPR007351; HMMPfam:IPR014048; Gene3D:IPR011991; HMMPanther:IPR014048; HMMTigr:IPR014048; superfamily:IPR014048 YP_002938306.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002938307.1 CytoplasmicMembrane, score:9.99 YP_002938308.1 CytoplasmicMembrane, score:9.99 YP_002938309.1 Unknown cell location YP_002938310.1 Unknown cell location YP_002938311.1 CytoplasmicMembrane, score:9.99; NOG34966 non supervised orthologous group YP_002938312.1 Extracellular, score:8.82; ScanRegExp:IPR003439 YP_002938313.1 Cytoplasmic, score:8.87; NOG36343 non supervised orthologous group; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002938314.1 Cytoplasmic, score:8.87; COG3279 Response regulator of the LytR/AlgR family; KEGG:K02477 sensory transduction protein LytT; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938315.1 CytoplasmicMembrane, score:9.99; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; HMMPfam:IPR003594; Gene3D:IPR003594; superfamily:IPR003594 YP_002938316.1 Cytoplasmic, score:8.87; COG1708 Predicted nucleotidyltransferases; KEGG:0hypothetical protein; HMMPfam:IPR002934 YP_002938317.1 Cytoplasmic, score:8.87; COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; KEGG:K07720 two-component sensor response regulator; HMMPfam:IPR000005; Gene3D:IPR012287; HMMSmart:IPR000005; ScanRegExp:IPR000005; superfamily:IPR003313; superfamily:IPR009057 YP_002938318.1 Unknown cell location; COG1874 Beta-galactosidase; KEGG:K01190 beta-galactosidase HMMPfam:IPR013529; HMMPfam:IPR013738; HMMPfam:IPR013739; Gene3D:IPR013781; HMMPIR:IPR003476 YP_002938319.1 Cytoplasmic, score:9.98; COG3534 Alpha-L-arabinofuranosidase; KEGG:K01209 alpha-L-arabinofuranosidase HMMPfam:IPR010720; HMMSmart:IPR010720 YP_002938320.1 Cytoplasmic, score:8.87; COG4189 Predicted transcriptional regulator; HMMPfam:IPR001845; Gene3D:IPR011991; HMMSmart:IPR001845 YP_002938321.1 Cytoplasmic, score:8.87 YP_002938322.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 putative recombinase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002938323.1 Extracellular, score:8.82 YP_002938324.1 Cytoplasmic, score:8.87; COG3958 Transketolase, C-terminal subunit; KEGG:K00615 transketolase, C-terminal subunit HMMPfam:IPR005475; HMMPfam:IPR005476; Gene3D:IPR015941; superfamily:IPR009014 YP_002938325.1 Cytoplasmic, score:8.87; COG3959 Transketolase, N-terminal subunit; KEGG:K00615 transketolase domain protein HMMPfam:IPR005474 YP_002938326.1 Cytoplasmic, score:8.87; COG0176 Transaldolase; KEGG:K00616 transaldolase HMMPfam:IPR001585; Gene3D:IPR013785; HMMPanther:IPR001585; HMMTigr:IPR004731; ScanRegExp:IPR001585 YP_002938327.1 Extracellular, score:8.82 YP_002938328.1 Cytoplasmic, score:8.87; COG1349 Transcriptional regulators of sugar metabolism; KEGG:K03436 DeoR-family transcriptional regulator; HMMPfam:IPR001034; HMMPfam:IPR014036; HMMSmart:IPR001034 YP_002938329.1 Cytoplasmic, score:8.87; COG2199 FOG: GGDEF domain; KEGG:K02488 sensory transduction system regulatory protein; HMMPfam:IPR000160; HMMPfam:IPR013105; Gene3D:IPR011990; HMMSmart:IPR000160; HMMSmart:IPR013026; HMMTigr:IPR000160 YP_002938330.1 Cytoplasmic, score:8.87; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; KEGG:K01588 phosphoribosylaminoimidazole carboxylase, catalytic subunit HMMPfam:IPR000031; BlastProDom:IPR000031; Gene3D:IPR000031; HMMPanther:IPR000031; HMMTigr:IPR000031; superfamily:IPR000031 YP_002938331.1 Cytoplasmic, score:8.87; COG2309 Leucyl aminopeptidase (aminopeptidase T) YP_002938332.1 CytoplasmicMembrane, score:9.99 YP_002938333.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002938334.1 Cytoplasmic, score:9.98; COG0529 Adenylylsulfate kinase and related kinases; KEGG:K00955 sulfate adenylyltransferase, large subunit HMMPfam:IPR000795; HMMPfam:IPR004161; HMMTigr:IPR005225; HMMTigr:IPR011779; ScanRegExp:IPR000795; superfamily:IPR009000; superfamily:IPR009001 YP_002938335.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_002938336.1 Unknown cell location; COG1146 Ferredoxin; KEGG:K00395 adenylylsulfate reductase, beta subunit HMMPfam:IPR001450; ScanRegExp:IPR001450 YP_002938337.1 catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite YP_002938338.1 CytoplasmicMembrane, score:9.49; COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; KEGG:K06020 CysA HMMPfam:IPR003439; HMMPfam:IPR013611; BlastProDom:IPR003439; HMMSmart:IPR003593; HMMTigr:IPR005666; ScanRegExp:IPR003439; superfamily:IPR008995 YP_002938339.1 CytoplasmicMembrane, score:10.00; COG4208 ABC-type sulfate transport system, permease component; KEGG:K02047 ABC sulfate/thiosulfate transporter, inner membrane subunit, CysW; HMMPfam:IPR000515; HMMTigr:IPR005667 YP_002938340.1 CytoplasmicMembrane, score:10.00; COG0555 ABC-type sulfate transport system, permease component; KEGG:K02046 sulfate ABC transporter, permease protein; HMMPfam:IPR000515; HMMTigr:IPR005667; HMMTigr:IPR011865 YP_002938341.1 Unknown cell location; COG1613 ABC-type sulfate transport system, periplasmic component; KEGG:K02048 substrate binding protein of an ABC transporter complex; HMMPfam:IPR006059; HMMTigr:IPR005669 YP_002938342.1 Cytoplasmic, score:8.87; COG0031 Cysteine synthase; KEGG:K01738 hypothetical protein HMMPfam:IPR001926; HMMTigr:IPR005856; HMMTigr:IPR005859 YP_002938343.1 CytoplasmicMembrane, score:9.99; COG1757 Na+/H+ antiporter; KEGG:K03315 probable Na(+)/H(+) antiporter; HMMPfam:IPR004770 YP_002938344.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits YP_002938345.1 Cytoplasmic, score:8.87; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; KEGG:K02823 dihydroorotate dehydrogenase electron transfer subunit; HMMPfam:IPR001433; HMMPIR:IPR012165 YP_002938346.1 Cytoplasmic, score:8.87; COG0284 Orotidine-5-phosphate decarboxylase; KEGG:K01591 orotidine 5-phosphate decarboxylase HMMPfam:IPR001754; Gene3D:IPR013785; HMMTigr:IPR011995; superfamily:IPR011060 YP_002938347.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002938348.1 Unknown cell location YP_002938349.1 Unknown cell location YP_002938350.1 Unknown cell location YP_002938351.1 Unknown cell location YP_002938352.1 Unknown cell location; NOG23798 non supervised orthologous group YP_002938353.1 Unknown cell location YP_002938354.1 Cytoplasmic, score:8.87; COG1343 Uncharacterized protein predicted to be involved in DNA repair; HMMPfam:IPR003799; HMMTigr:IPR003799 YP_002938355.1 Cytoplasmic, score:8.87; COG1518 Uncharacterized protein predicted to be involved in DNA repair; KEGG:K00961 DNA polymerase HMMPfam:IPR002729; BlastProDom:IPR002729; HMMTigr:IPR002729 YP_002938356.1 Cytoplasmic, score:8.87; COG1468 RecB family exonuclease; KEGG:K07464 hypothetical protein; BlastProDom:IPR002785; HMMTigr:IPR013343 YP_002938357.1 Cytoplasmic, score:8.87; COG3649 Uncharacterized protein predicted to be involved in DNA repair; HMMPfam:IPR006482; HMMTigr:IPR006482; HMMTigr:IPR013418 YP_002938358.1 Cytoplasmic, score:8.87; NOG06096 non supervised orthologous group; HMMTigr:IPR010144 YP_002938359.1 Cytoplasmic, score:8.87; NOG08906 non supervised orthologous group; HMMTigr:IPR010155; HMMTigr:IPR013422; ScanRegExp:IPR000323 YP_002938360.1 Cytoplasmic, score:8.87 YP_002938361.1 Cytoplasmic, score:8.87 YP_002938362.1 Cytoplasmic, score:8.87; COG1203 Predicted helicases; KEGG:0predicted helicase; HMMPfam:IPR001650; HMMSmart:IPR001650; HMMSmart:IPR014001; HMMTigr:IPR006474 YP_002938363.1 Cytoplasmic, score:8.87; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); KEGG:K05882 probable oxidoreductase protein HMMPfam:IPR001395; BlastProDom:IPR001395; Gene3D:IPR001395; HMMPanther:IPR001395; HMMPanther:IPR005399; superfamily:IPR001395 YP_002938364.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_002938365.1 Cytoplasmic, score:8.87; COG0414 Panthothenate synthetase; KEGG:K01918 putative pantoate--beta-alanine ligase HMMPfam:IPR003721; Gene3D:IPR014729; HMMPanther:IPR003721; HMMTigr:IPR003721 YP_002938366.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002938367.1 Cytoplasmic, score:8.87; COG5495 Uncharacterized conserved protein; HMMPfam:IPR000683 YP_002938368.1 Cytoplasmic, score:8.87 YP_002938369.1 CytoplasmicMembrane, score:7.63; COG2206 HD-GYP domain; KEGG:K07814 response regulator receiver modulated metal dependent phosphohydrolase; HMMPfam:IPR000160; HMMPfam:IPR006674; HMMSmart:IPR000160; HMMSmart:IPR003607; HMMTigr:IPR000160; HMMTigr:IPR006675 YP_002938370.1 CytoplasmicMembrane, score:9.75 YP_002938371.1 Cytoplasmic, score:8.87; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; HMMTigr:IPR014268 YP_002938372.1 distantly related to a-glycosyltransferases; Cytoplasmic, score:8.87; COG0438 Glycosyltransferase; KEGG:K00712 glucosyltransferase, putative HMMPfam:IPR001296; HMMPfam:IPR015397; HMMTigr:IPR014267 YP_002938373.1 Cytoplasmic, score:8.87; COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); KEGG:K03070 preprotein translocase subunit SecA; HMMPfam:IPR011115; HMMPfam:IPR011116; HMMPfam:IPR011130; HMMSmart:IPR014001 YP_002938374.1 Unknown cell location; NOG17354 non supervised orthologous group YP_002938375.1 Cytoplasmic, score:8.87; NOG07816 non supervised orthologous group YP_002938376.1 Cytoplasmic, score:8.87; NOG09638 non supervised orthologous group YP_002938377.1 CytoplasmicMembrane, score:10.00; COG0201 Preprotein translocase subunit SecY; KEGG:K03076 preprotein translocase subunit SecY; HMMPfam:IPR002208; FPrintScan:IPR002208; HMMPIR:IPR002208; HMMPanther:IPR002208; superfamily:IPR002208 YP_002938378.1 Unknown cell location YP_002938379.1 CytoplasmicMembrane, score:9.26; NOG15557 non supervised orthologous group YP_002938380.1 CytoplasmicMembrane, score:9.75 YP_002938381.1 Unknown cell location; NOG17355 non supervised orthologous group YP_002938382.1 Cytoplasmic, score:8.87; NOG17355 non supervised orthologous group; KEGG:0hypothetical protein YP_002938383.1 distantly related to a-glycosyltransferases; Cytoplasmic, score:8.87; COG0438 Glycosyltransferase; KEGG:0possible glycosyltransferase HMMPfam:IPR001296; HMMPfam:IPR015397 YP_002938384.1 Cytoplasmic, score:8.87; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_002938385.1 with N-terminal domain related to b-glycosyltransferases and C-terminal domain; Cytoplasmic, score:8.87; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:K00745 galactosyl transferase paralog HMMPfam:IPR001173; HMMPfam:IPR002495 YP_002938386.1 Cytoplasmic, score:8.87; COG3629 DNA-binding transcriptional activator of the SARP family YP_002938387.1 CytoplasmicMembrane, score:9.26; NOG06717 non supervised orthologous group YP_002938388.1 Cytoplasmic, score:8.87; COG3279 Response regulator of the LytR/AlgR family; KEGG:K02477 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938389.1 CytoplasmicMembrane, score:9.99; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; superfamily:IPR003594 YP_002938390.1 Cytoplasmic, score:8.87; COG1716 FOG: FHA domain; KEGG:K02488 phytochrome-like protein; HMMPfam:IPR001633; HMMSmart:IPR001633 YP_002938391.1 CytoplasmicMembrane, score:9.99; COG4732 Predicted membrane protein; HMMTigr:IPR012652 YP_002938392.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_002938393.1 Unknown cell location; COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; KEGG:K00877 K00941 phosphomethylpyrimidine kinase HMMPfam:IPR013749; HMMTigr:IPR004399 YP_002938394.1 Cytoplasmic, score:8.87; COG0352 Thiamine monophosphate synthase; KEGG:K00788 thiamine-phosphate pyrophosphorylase HMMPfam:IPR003733; BlastProDom:IPR003733; Gene3D:IPR013785; HMMTigr:IPR003733 YP_002938395.1 Cytoplasmic, score:8.87; COG2145 Hydroxyethylthiazole kinase, sugar kinase family; KEGG:K00878 hydroxyethylthiazole kinase ThiM/ThiK (FS!) HMMPfam:IPR000417; FPrintScan:IPR000417; HMMPIR:IPR011144; HMMPanther:IPR000417 YP_002938396.1 Unknown cell location YP_002938397.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 RNA-directed DNA polymerase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002938398.1 Extracellular, score:8.82 YP_002938399.1 Cytoplasmic, score:8.87; COG0289 Dihydrodipicolinate reductase; KEGG:K00215 dihydrodipicolinate reductase HMMPfam:IPR000846; BlastProDom:IPR000846; HMMPanther:IPR011770; HMMTigr:IPR011770; ScanRegExp:IPR000846 YP_002938400.1 Unknown cell location; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; KEGG:K01714 dihydrodipicolinate synthase HMMPfam:IPR002220; BlastProDom:IPR002220; FPrintScan:IPR002220; Gene3D:IPR013785; HMMPanther:IPR002220; HMMTigr:IPR005263; ScanRegExp:IPR002220 YP_002938401.1 Cytoplasmic, score:8.87; COG2109 ATP:corrinoid adenosyltransferase; HMMPIR:IPR003724 YP_002938402.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA YP_002938403.1 Cytoplasmic, score:9.98; COG1217 Predicted membrane GTPase involved in stress response; KEGG:K06207 GTP-binding protein TypA; HMMPfam:IPR000640; HMMPfam:IPR000795; HMMPfam:IPR004161; FPrintScan:IPR000795; Gene3D:IPR000640; HMMTigr:IPR005225; HMMTigr:IPR006298; ScanRegExp:IPR000795; superfamily:IPR009000; superfamily:IPR009022 YP_002938404.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 putative reverse transcriptasematurase of intron HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002938405.1 Extracellular, score:8.82 YP_002938406.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis YP_002938407.1 Unknown cell location; COG3707 Response regulator with putative antiterminator output domain; HMMPfam:IPR005561; Gene3D:IPR011991; superfamily:IPR011006 YP_002938408.1 Cytoplasmic, score:9.98; COG0174 Glutamine synthetase; KEGG:K01915 glutamine synthetase, type I HMMPfam:IPR008146; HMMPfam:IPR008147; BlastProDom:IPR008146; Gene3D:IPR014746; HMMTigr:IPR004809; ScanRegExp:IPR008147; superfamily:IPR008147 YP_002938409.1 Cytoplasmic, score:8.87; KOG3055 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; KEGG:K01814 APG10 (ALBINO AND PALE GREEN 10); 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imid azole-4-carboxamide isomerase HMMPfam:IPR006062; Gene3D:IPR013785; HMMPanther:IPR011858; HMMTigr:IPR011858; superfamily:IPR011060 YP_002938410.1 Cytoplasmic, score:8.87; COG0516 IMP dehydrogenase/GMP reductase; KEGG:K00024 inosine-5-monophosphate dehydrogenase HMMPfam:IPR000644; HMMPfam:IPR001093; Gene3D:IPR013785; HMMPanther:IPR001093; HMMSmart:IPR000644; HMMTigr:IPR005990; ScanRegExp:IPR015875 YP_002938411.1 Unknown cell location YP_002938412.1 CytoplasmicMembrane, score:7.63; COG1253 Hemolysins and related proteins containing CBS domains; KEGG:K03699 probable hemolysin-related protein; HMMPfam:IPR000644; HMMPfam:IPR002550; HMMPfam:IPR005170 YP_002938413.1 Unknown cell location YP_002938414.1 Unknown cell location YP_002938415.1 Unknown cell location; KOG4210 Nuclear localization sequence binding protein YP_002938416.1 Unknown cell location YP_002938417.1 Extracellular, score:8.82 YP_002938418.1 Unknown cell location YP_002938419.1 CytoplasmicMembrane, score:9.99 YP_002938420.1 Cytoplasmic, score:8.87; COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; KEGG:K02283 component of type IV pilus; HMMPfam:IPR001482; BlastProDom:IPR001482 YP_002938421.1 Unknown cell location YP_002938422.1 Cytoplasmic, score:8.87; COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; KEGG:K00811 aspartate aminotransferase Gene3D:IPR015421; superfamily:IPR015424 YP_002938423.1 Cytoplasmic, score:8.87; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; KEGG:K07478 recombination factor protein RarA; HMMPfam:IPR003959; HMMSmart:IPR003593 YP_002938424.1 Cytoplasmic, score:8.87; COG1070 Sugar (pentulose and hexulose) kinases; KEGG:K00854 xylulokinase HMMPfam:IPR000577; HMMPanther:IPR000577; HMMTigr:IPR006000; ScanRegExp:IPR000577 YP_002938425.1 Cytoplasmic, score:8.87; COG2407 L-fucose isomerase and related proteins YP_002938426.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K02529 transcriptional regulator, LacI family; HMMPfam:IPR001761; HMMSmart:IPR000843; superfamily:IPR010982 YP_002938427.1 Cytoplasmic, score:9.98; COG0542 ATPases with chaperone activity, ATP-binding subunit; KEGG:K03695 heat shock protein ClpB-like; HMMPfam:IPR003959; HMMPfam:IPR004176; HMMPfam:IPR013093; FPrintScan:IPR001270; HMMSmart:IPR003593; ScanRegExp:IPR001270 YP_002938428.1 Cytoplasmic, score:8.87; COG2357 Uncharacterized protein conserved in bacteria; KEGG:K00951 GTP pyrophosphokinase (putative) HMMPfam:IPR007685 YP_002938429.1 Unknown cell location; COG0671 Membrane-associated phospholipid phosphatase YP_002938430.1 Cytoplasmic, score:8.87; COG0688 Phosphatidylserine decarboxylase; KEGG:K01613 phosphatidylserine decarboxylase HMMPfam:IPR003817; HMMPanther:IPR005221 YP_002938431.1 CytoplasmicMembrane, score:9.99; COG1183 Phosphatidylserine synthase; KEGG:K00998 phosphatidylserine synthase HMMPfam:IPR000462 YP_002938432.1 Cytoplasmic, score:8.87; COG1329 Transcriptional regulators, similar to M. xanthus CarD; HMMPfam:IPR003711 YP_002938433.1 Cytoplasmic, score:8.87; NOG14451 non supervised orthologous group YP_002938434.1 CytoplasmicMembrane, score:9.99; COG1055 Na+/H+ antiporter NhaD and related arsenite permeases; HMMPfam:IPR004680 YP_002938435.1 Cytoplasmic, score:8.87; COG1011 Predicted hydrolase (HAD superfamily); KEGG:K07025 haloacid dehalogenase-like hydrolase; HMMPfam:IPR005834; HMMTigr:IPR006402 YP_002938436.1 Unknown cell location YP_002938437.1 Cytoplasmic, score:9.98; COG1191 DNA-directed RNA polymerase specialized sigma subunit; KEGG:K03091 RNA polymerase sigma-F factor; HMMPfam:IPR007627; HMMPfam:IPR007630; FPrintScan:IPR000943; HMMTigr:IPR014284; superfamily:IPR013324; superfamily:IPR013325 YP_002938438.1 Cytoplasmic, score:8.87; COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); KEGG:K08282 putative anti-sigma regulatory factor, serine/threonine protein kinase HMMPfam:IPR003594; Gene3D:IPR003594; HMMTigr:IPR010194; superfamily:IPR003594 YP_002938439.1 Cytoplasmic, score:8.87; COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); KEGG:K06378 anti-sigma F factor antagonist; HMMPfam:IPR002645; BlastProDom:IPR003658; Gene3D:IPR002645; superfamily:IPR002645 YP_002938440.1 Unknown cell location; COG0457 FOG: TPR repeat; HMMPfam:IPR013105; Gene3D:IPR011990 YP_002938441.1 Cytoplasmic, score:8.87 YP_002938442.1 Cytoplasmic, score:8.87; COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain; KEGG:K09749 hypothetical protein; HMMPfam:IPR005646 YP_002938443.1 Cytoplasmic, score:8.87; COG3507 Beta-xylosidase; KEGG:0CHU large protein; candidate polyfunctional acetylxylan esterase/b-xylosidase/A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein HMMPfam:IPR006710; Gene3D:IPR013320; HMMPanther:IPR006710 YP_002938444.1 Unknown cell location YP_002938445.1 Cytoplasmic, score:9.98; COG0525 Valyl-tRNA synthetase; KEGG:K01873 valyl-tRNA synthetase HMMPfam:IPR002300; HMMPfam:IPR013155; FPrintScan:IPR002303; Gene3D:IPR014729; HMMPanther:IPR002303; HMMTigr:IPR002303; ScanRegExp:IPR001412; superfamily:IPR009008; superfamily:IPR009080; superfamily:IPR010978 YP_002938446.1 Unknown cell location YP_002938447.1 Unknown cell location YP_002938448.1 Cytoplasmic, score:8.87; COG4115 Uncharacterized protein conserved in bacteria; KEGG:0hypothetical protein HMMPfam:IPR009614; HMMTigr:IPR009614 YP_002938449.1 Cytoplasmic, score:8.87; COG3077 DNA-damage-inducible protein J; KEGG:K07473 hypothetical protein; HMMPfam:IPR007337; HMMTigr:IPR007337 YP_002938450.1 Cytoplasmic, score:9.98; COG1940 Transcriptional regulator/sugar kinase; KEGG:K00845 putative NAGC-like transcriptional regulator HMMPfam:IPR000600 YP_002938451.1 Cytoplasmic, score:8.87; COG3862 Uncharacterized protein with conserved CXXC pairs; KEGG:K00301 NAD(FAD)-dependent dehydrogenase HMMPfam:IPR012460 YP_002938452.1 Cytoplasmic, score:9.98; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; KEGG:K00301 sarcosine oxidase alpha subunit HMMPfam:IPR013027; FPrintScan:IPR000103; FPrintScan:IPR000759; FPrintScan:IPR013027 YP_002938453.1 Cytoplasmic, score:8.87; COG0579 Predicted dehydrogenase; KEGG:K00111 FAD-dependent oxidoreductase HMMPfam:IPR006076; HMMPfam:IPR007419 YP_002938454.1 Unknown cell location; COG0554 Glycerol kinase; KEGG:K00864 glycerol kinase HMMPfam:IPR000577; HMMPanther:IPR000577; HMMPanther:IPR005999; HMMTigr:IPR005999; ScanRegExp:IPR000577 YP_002938455.1 Unknown cell location; COG2407 L-fucose isomerase and related proteins; BlastProDom:IPR003762; superfamily:IPR009015 YP_002938456.1 CytoplasmicMembrane, score:9.99; NOG17493 non supervised orthologous group; KEGG:0protein of unknown function DUF81; HMMPfam:IPR002781; ScanRegExp:IPR001680 YP_002938457.1 Cytoplasmic, score:8.87; COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; KEGG:K01811 alpha-glucosidase; HMMPfam:IPR000322; HMMPanther:IPR000322; ScanRegExp:IPR000897 YP_002938458.1 uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function YP_002938459.1 Cytoplasmic, score:8.87 YP_002938460.1 Cytoplasmic, score:8.87; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; KEGG:K00020 3-hydroxyisobutyrate dehydrogenase HMMPfam:IPR006115; Gene3D:IPR013328; HMMPanther:IPR015815; ScanRegExp:IPR002204; superfamily:IPR008927 YP_002938461.1 Cytoplasmic, score:8.87; COG0176 Transaldolase; KEGG:K00616 putative transaldolase HMMPfam:IPR001585; Gene3D:IPR013785; HMMPanther:IPR001585 YP_002938462.1 Extracellular, score:8.82 YP_002938463.1 CytoplasmicMembrane, score:10.00; COG0841 Cation/multidrug efflux pump; KEGG:K03296 acriflavin resistance protein; HMMPfam:IPR001036; superfamily:IPR009053 YP_002938464.1 Unknown cell location YP_002938465.1 Cytoplasmic, score:9.98; COG0726 Predicted xylanase/chitin deacetylase; KEGG:0chitooligosaccharide deacetylase HMMPfam:IPR002509; superfamily:IPR011330 YP_002938466.1 Cytoplasmic, score:8.87; COG0775 Nucleoside phosphorylase; KEGG:K01243 K01244 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase HMMPfam:IPR000845; HMMPanther:IPR000845; HMMTigr:IPR010049 YP_002938467.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 YP_002938468.1 Cytoplasmic, score:9.98; COG1164 Oligoendopeptidase F; KEGG:K08602 peptidase HMMPfam:IPR001567; HMMPfam:IPR013647; HMMTigr:IPR004438; ScanRegExp:IPR006025; ScanRegExp:IPR010916 YP_002938469.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP YP_002938470.1 CytoplasmicMembrane, score:10.00; COG1292 Choline-glycine betaine transporter; KEGG:K03451 choline/carnitine/betaine transporter family protein; HMMPfam:IPR000060; BlastProDom:IPR000060 YP_002938471.1 Unknown cell location YP_002938472.1 Cytoplasmic, score:8.87; COG3547 Transposase and inactivated derivatives; KEGG:K07486 transposase; HMMPfam:IPR002525; HMMPfam:IPR003346; ScanRegExp:IPR001425 YP_002938473.1 Cytoplasmic, score:8.87; COG0510 Predicted choline kinase involved in LPS biosynthesis; KEGG:K00866 K00968 choline kinase HMMPfam:IPR005835 YP_002938474.1 Cytoplasmic, score:8.87; COG0510 Predicted choline kinase involved in LPS biosynthesis; KEGG:K00866 K00968 choline kinase HMMPfam:IPR002573; superfamily:IPR011009 YP_002938475.1 Unknown cell location; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; KEGG:K08070 2-alkenal reductase HMMPfam:IPR001254; HMMPfam:IPR001478; FPrintScan:IPR001940; HMMSmart:IPR001478; superfamily:IPR001478; superfamily:IPR009003 YP_002938476.1 Unknown cell location YP_002938477.1 Unknown cell location; KOG2388 UDP-N-acetylglucosamine pyrophosphorylase; KEGG:K00972 UDP-N-acteylglucosamine pyrophosphorylase 1 HMMPfam:IPR002618; HMMPanther:IPR002618 YP_002938478.1 Unknown cell location; COG1316 Transcriptional regulator; HMMPfam:IPR004474; HMMTigr:IPR004474 YP_002938479.1 Unknown cell location YP_002938480.1 Cytoplasmic, score:8.87; COG1109 Phosphomannomutase; KEGG:K01840 probable phosphomannomutase HMMPfam:IPR005844; HMMPfam:IPR005845; FPrintScan:IPR005841; ScanRegExp:IPR005841 YP_002938481.1 Cytoplasmic, score:8.87; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:0putative UDP-galactose--lipooligosaccharide galactosyltransferase HMMPfam:IPR001173 YP_002938482.1 CytoplasmicMembrane, score:9.82; COG2148 Sugar transferases involved in lipopolysaccharide synthesis; KEGG:0hypothetical protein HMMPfam:IPR003362 YP_002938483.1 Cytoplasmic, score:8.87; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; KEGG:0spore coat polysaccharide biosynthesis protein SpsC HMMPfam:IPR000653; Gene3D:IPR015421; Gene3D:IPR015422; HMMPIR:IPR000653; superfamily:IPR015424 YP_002938484.1 CytoplasmicMembrane, score:7.63; COG1086 Predicted nucleoside-diphosphate sugar epimerases; KEGG:K00100 K01726 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase HMMPfam:IPR003781; HMMPfam:IPR003869; HMMPanther:IPR003869 YP_002938485.1 CytoplasmicMembrane, score:9.99; COG2246 Predicted membrane protein; HMMPfam:IPR007267 YP_002938486.1 CytoplasmicMembrane, score:9.99; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; KEGG:K03328 polysaccharide biosynthesis protein; HMMPfam:IPR002797 YP_002938487.1 Unknown cell location; superfamily:IPR013830 YP_002938488.1 CytoplasmicMembrane, score:9.99; COG1696 Predicted membrane protein involved in D-alanine export; KEGG:0AlgI HMMPfam:IPR004299 YP_002938489.1 Unknown cell location YP_002938490.1 Cytoplasmic, score:8.87; COG0438 Glycosyltransferase; KEGG:0glycosyltransferase HMMPfam:IPR001296 YP_002938491.1 Cytoplasmic, score:8.87; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:0glycosyltransferase HMMPfam:IPR001173 YP_002938492.1 CytoplasmicMembrane, score:9.99; NOG33934 non supervised orthologous group YP_002938493.1 Cytoplasmic, score:8.87; NOG09872 non supervised orthologous group; KEGG:0glycosyltransferase YP_002938494.1 Cytoplasmic, score:8.87; NOG09872 non supervised orthologous group; KEGG:0glycosyltransferase YP_002938495.1 CytoplasmicMembrane, score:9.99; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; KEGG:K03328 O-antigen transporter; HMMPfam:IPR002797 YP_002938496.1 CytoplasmicMembrane, score:9.99; NOG33934 non supervised orthologous group YP_002938497.1 CytoplasmicMembrane, score:9.99; COG3274 Uncharacterized protein conserved in bacteria; HMMPfam:IPR002656 YP_002938498.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 RNA-directed DNA polymerase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002938499.1 Extracellular, score:8.82 YP_002938500.1 Extracellular, score:9.73; COG5263 FOG: Glucan-binding domain (YG repeat); KEGG:K01446 N-acetylmuramoyl-L-alanine amidase HMMPfam:IPR002479; HMMPfam:IPR005490; ScanRegExp:IPR002345 YP_002938501.1 Extracellular, score:9.55; COG5263 FOG: Glucan-binding domain (YG repeat); KEGG:K07273 glycoside hydrolase family 25; HMMPfam:IPR002053; HMMPfam:IPR002479; BlastProDom:IPR002053; Gene3D:IPR013781; HMMSmart:IPR002053; ScanRegExp:IPR002345 YP_002938502.1 CytoplasmicMembrane, score:9.99; COG3274 Uncharacterized protein conserved in bacteria YP_002938503.1 Cytoplasmic, score:8.87; COG3436 Transposase and inactivated derivatives; KEGG:K07484 hypothetical protein; HMMPfam:IPR004291 YP_002938504.1 Extracellular, score:8.82; HMMPfam:IPR004291 YP_002938505.1 Unknown cell location YP_002938506.1 Unknown cell location YP_002938507.1 Cytoplasmic, score:8.87; COG2826 Transposase and inactivated derivatives, IS30 family; superfamily:IPR012337 YP_002938508.1 Unknown cell location YP_002938509.1 CytoplasmicMembrane, score:9.99; COG3274 Uncharacterized protein conserved in bacteria YP_002938510.1 Extracellular, score:8.82 YP_002938511.1 Unknown cell location YP_002938512.1 Unknown cell location; COG3436 Transposase and inactivated derivatives; KEGG:K07484 hypothetical protein YP_002938513.1 Cytoplasmic, score:8.87; COG0456 Acetyltransferases; HMMPfam:IPR000182 YP_002938514.1 Cytoplasmic, score:8.87; COG3475 LPS biosynthesis protein; KEGG:K07271 LicD family protein HMMPfam:IPR007074 YP_002938515.1 Cytoplasmic, score:9.98; COG0615 Cytidylyltransferase; KEGG:K00980 glycerol-3-phosphate cytidyltransferase, TagD HMMPfam:IPR000683; HMMPfam:IPR004820; Gene3D:IPR014729; HMMTigr:IPR004821 YP_002938516.1 Cytoplasmic, score:8.87; COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; KEGG:K00839 aspartate aminotransferase, putative HMMPfam:IPR000192; Gene3D:IPR015421; superfamily:IPR015424 YP_002938517.1 Unknown cell location; COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; HMMPfam:IPR007554 YP_002938518.1 CytoplasmicMembrane, score:9.99; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; HMMPfam:IPR002797 YP_002938519.1 Cytoplasmic, score:9.65; COG0110 Acetyltransferase (isoleucine patch superfamily); KEGG:0acetyltransferase superfamily:IPR011004 YP_002938520.1 Cytoplasmic, score:8.87; COG3475 LPS biosynthesis protein; KEGG:K07271 LicD family protein HMMPfam:IPR007074 YP_002938521.1 CytoplasmicMembrane, score:9.99; NOG36355 non supervised orthologous group; HMMPfam:IPR007016 YP_002938522.1 Cytoplasmic, score:9.65; COG1045 Serine acetyltransferase; KEGG:K00640 serine O-acetyltransferase HMMPfam:IPR001451; superfamily:IPR011004 YP_002938523.1 distantly related to a-glycosyltransferases; Cytoplasmic, score:8.87; COG0438 Glycosyltransferase; KEGG:0glycosyltransferase HMMPfam:IPR001296 YP_002938524.1 Cytoplasmic, score:8.87; COG0438 Glycosyltransferase; KEGG:0glycosyltransferase HMMPfam:IPR001296 YP_002938525.1 Cytoplasmic, score:8.87; COG5017 Uncharacterized conserved protein; KEGG:K07432 putative glycosyltransferase HMMPfam:IPR007235 YP_002938526.1 Unknown cell location; COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; KEGG:K07441 probable glucosyltransferase EpsE homolog HMMPfam:IPR013969; HMMPanther:IPR013969 YP_002938527.1 Unknown cell location YP_002938528.1 CytoplasmicMembrane, score:10.00; COG2148 Sugar transferases involved in lipopolysaccharide synthesis; KEGG:K00996 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase HMMPfam:IPR003362 YP_002938529.1 Cytoplasmic, score:8.87; COG0019 Diaminopimelate decarboxylase; KEGG:K01586 probable diaminopimelate decarboxylase HMMPfam:IPR000183; superfamily:IPR009006 YP_002938530.1 Cytoplasmic, score:8.87; BlastProDom:IPR003230; Gene3D:IPR009081; superfamily:IPR009081 YP_002938531.1 Cytoplasmic, score:9.98; COG1020 Non-ribosomal peptide synthetase modules and related proteins; KEGG:0putative amino acid activating enzyme HMMPfam:IPR000873; FPrintScan:IPR000873; ScanRegExp:IPR000873 YP_002938532.1 Unknown cell location YP_002938533.1 CytoplasmicMembrane, score:9.75; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:0putative teichoic acid/polysaccharide glycosyl transferase, family 2 HMMPfam:IPR001173 YP_002938534.1 Cytoplasmic, score:8.87; NOG26620 non supervised orthologous group; HMMPfam:IPR008323 YP_002938535.1 Unknown cell location YP_002938536.1 Unknown cell location; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:K01515 probable ADP-ribose pyrophosphatase HMMPfam:IPR000086; Gene3D:IPR000086; superfamily:IPR015797 YP_002938537.1 Cytoplasmic, score:8.87; superfamily:IPR000157 YP_002938538.1 CytoplasmicMembrane, score:9.99; NOG23461 non supervised orthologous group YP_002938539.1 Unknown cell location; COG0784 FOG: CheY-like receiver; KEGG:K07699 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR014879; BlastProDom:IPR001789; Gene3D:IPR011991; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938540.1 Cytoplasmic, score:8.87; HMMPfam:IPR003594; Gene3D:IPR003594; superfamily:IPR003594 YP_002938541.1 Cytoplasmic, score:8.87; NOG04786 non supervised orthologous group; HMMPfam:IPR003010; Gene3D:IPR003010; superfamily:IPR003010 YP_002938542.1 Cytoplasmic, score:8.87; COG4974 Site-specific recombinase XerD; KEGG:K04763 similar to integrase/recombinase; HMMPfam:IPR002104; HMMPfam:IPR004107; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002938543.1 Cytoplasmic, score:9.98; COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; KEGG:K01921 D-ala D-alanine ligase Gene3D:IPR013816 YP_002938544.1 Cytoplasmic, score:8.87; HMMPfam:IPR013105; Gene3D:IPR011990 YP_002938546.1 Extracellular, score:7.62; COG1475 Predicted transcriptional regulators; KEGG:K03497 ParB-like partition proteins; HMMPfam:IPR003115; HMMSmart:IPR003115; HMMTigr:IPR004437 YP_002938547.1 Cytoplasmic, score:8.87; NOG14267 non supervised orthologous group YP_002938548.1 Cytoplasmic, score:8.87; COG0270 Site-specific DNA methylase; KEGG:K00558 DNA-cytosine methyltransferase HMMPfam:IPR001525; HMMPanther:IPR001525 YP_002938549.1 Cytoplasmic, score:8.87; NOG09588 non supervised orthologous group YP_002938550.1 Cytoplasmic, score:8.87; NOG11062 non supervised orthologous group YP_002938551.1 Unknown cell location YP_002938552.1 Unknown cell location; COG3505 Type IV secretory pathway, VirD4 components; KEGG:K03205 TraG protein YP_002938553.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 RNA-directed DNA polymerase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002938554.1 Cytoplasmic, score:8.87; COG3505 Type IV secretory pathway, VirD4 components; KEGG:K03205 ATPase involved in conjugal plasmid transfer; HMMPfam:IPR003688 YP_002938555.1 Unknown cell location YP_002938556.1 Unknown cell location; COG3655 Predicted transcriptional regulator; superfamily:IPR010982 YP_002938557.1 Cytoplasmic, score:8.87 YP_002938558.1 Unknown cell location YP_002938559.1 Cytoplasmic, score:8.87; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002938560.1 Cytoplasmic, score:8.87 YP_002938561.1 Unknown cell location YP_002938562.1 Extracellular, score:8.82 YP_002938563.1 Unknown cell location; NOG34358 non supervised orthologous group YP_002938564.1 Unknown cell location YP_002938565.1 Extracellular, score:8.82 YP_002938566.1 Unknown cell location; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002938567.1 Extracellular, score:8.82 YP_002938568.1 Cytoplasmic, score:8.87; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; KEGG:K01144 putative conjugal transfer protein HMMPfam:IPR005053; ScanRegExp:IPR015590 YP_002938569.1 Cytoplasmic, score:8.87; COG0358 DNA primase (bacterial type); KEGG:0DNA primase HMMPfam:IPR002694; BlastProDom:IPR002694; Gene3D:IPR002694; HMMSmart:IPR002694 YP_002938570.1 Cytoplasmic, score:8.87; COG5545 Predicted P-loop ATPase and inactivated derivatives; HMMPfam:IPR007936 YP_002938571.1 Unknown cell location YP_002938572.1 Unknown cell location YP_002938573.1 Cytoplasmic, score:8.87; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 cassette chromosome recombinase B; HMMPfam:IPR006119; HMMPfam:IPR011109; Gene3D:IPR006119; superfamily:IPR006119 YP_002938574.1 CytoplasmicMembrane, score:9.99; NOG28113 non supervised orthologous group YP_002938576.1 Unknown cell location; COG2088 Uncharacterized protein, involved in the regulation of septum location; KEGG:K06412 stage V sporulation protein G; HMMPfam:IPR007170 YP_002938577.1 Unknown cell location YP_002938578.1 Unknown cell location YP_002938579.1 Cytoplasmic, score:8.87 YP_002938580.1 CytoplasmicMembrane, score:7.80; COG3451 Type IV secretory pathway, VirB4 components YP_002938581.1 Extracellular, score:9.55; COG0791 Cell wall-associated hydrolases (invasion-associated proteins); KEGG:K01183 putative lipoprotein HMMPfam:IPR000064 YP_002938582.1 Unknown cell location YP_002938583.1 Unknown cell location; NOG36404 non supervised orthologous group YP_002938584.1 Unknown cell location YP_002938585.1 Cytoplasmic, score:8.87 YP_002938587.1 Unknown cell location YP_002938588.1 Unknown cell location YP_002938589.1 Cytoplasmic, score:8.87 YP_002938590.1 Unknown cell location YP_002938591.1 Cytoplasmic, score:8.87; COG3843 Type IV secretory pathway, VirD2 components (relaxase); HMMPfam:IPR005094 YP_002938592.1 Cytoplasmic, score:8.87; NOG37851 non supervised orthologous group; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002938593.1 Unknown cell location; COG1943 Transposase and inactivated derivatives; superfamily:IPR009061 YP_002938594.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 two component transcriptional regulator, winged helix family; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; Gene3D:IPR011991; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938595.1 CytoplasmicMembrane, score:10.00; COG0642 Signal transduction histidine kinase; KEGG:0predicted sensory transduction histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003661; FPrintScan:IPR004358; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002938596.1 CytoplasmicMembrane, score:9.82; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:0ABC transporter ATP-binding protein; HMMPfam:IPR003439; BlastProDom:IPR001482; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938597.1 CytoplasmicMembrane, score:9.99; COG0577 ABC-type antimicrobial peptide transport system, permease component; KEGG:0putative ABC transport system permease protein; HMMPfam:IPR003838 YP_002938598.1 Unknown cell location YP_002938599.1 Cytoplasmic, score:8.87; COG1408 Predicted phosphohydrolases; KEGG:0phosphoesterase HMMPfam:IPR004843 YP_002938600.1 Cytoplasmic, score:8.87; HMMPfam:IPR013249; superfamily:IPR013324 YP_002938601.1 Cytoplasmic, score:8.87 YP_002938602.1 Cytoplasmic, score:8.87 YP_002938603.1 Unknown cell location; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 site-specific recombinases, DNA invertase Pin homolog; HMMPfam:IPR006119; Gene3D:IPR006119; superfamily:IPR006119 YP_002938604.1 Unknown cell location YP_002938605.1 Cytoplasmic, score:8.87; COG2826 Transposase and inactivated derivatives, IS30 family; superfamily:IPR012337 YP_002938606.1 CytoplasmicMembrane, score:9.99; COG3274 Uncharacterized protein conserved in bacteria YP_002938607.1 Cytoplasmic, score:8.87; COG2801 Transposase and inactivated derivatives; KEGG:K07497 putative transposase, IS861; HMMPfam:IPR001584; superfamily:IPR012337 YP_002938608.1 Cytoplasmic, score:8.87; COG2963 Transposase and inactivated derivatives; HMMPfam:IPR002514; superfamily:IPR009057 YP_002938609.1 Cytoplasmic, score:8.87 YP_002938610.1 Cytoplasmic, score:8.87 YP_002938611.1 Cytoplasmic, score:8.87 YP_002938612.1 Unknown cell location YP_002938613.1 Cytoplasmic, score:8.87; COG2896 Molybdenum cofactor biosynthesis enzyme; HMMPfam:IPR007197 YP_002938614.1 Cytoplasmic, score:8.87; NOG08891 non supervised orthologous group YP_002938615.1 Extracellular, score:9.04; COG3291 FOG: PKD repeat; KEGG:0cysteine proteinase HMMPanther:IPR013128; ScanRegExp:IPR000169 YP_002938616.1 Unknown cell location; KOG1075 FOG: Reverse transcriptase YP_002938617.1 Unknown cell location; COG3401 Fibronectin type 3 domain-containing protein; KEGG:0putative fibronectin domain-containing lipoprotein; HMMPfam:IPR003961; Gene3D:IPR008957; HMMSmart:IPR003961; superfamily:IPR008957 YP_002938618.1 Unknown cell location; COG4870 Cysteine protease; KEGG:K06766 neogenin homolog 1; HMMPfam:IPR003961; HMMPfam:IPR013247; Gene3D:IPR008957; HMMSmart:IPR003961; superfamily:IPR008957 YP_002938619.1 Unknown cell location; COG3772 Phage-related lysozyme (muraminidase); KEGG:K01185 probable phage-related lysozyme HMMPfam:IPR002196; HMMPfam:IPR003961; HMMPfam:IPR013247; Gene3D:IPR008957; HMMSmart:IPR003961; superfamily:IPR008957 YP_002938620.1 Unknown cell location; COG0515 Serine/threonine protein kinase; KEGG:K01225 cellulose 1,4-beta-cellobiosidase HMMPfam:IPR003961; Gene3D:IPR008957; HMMSmart:IPR002931; HMMSmart:IPR003961; ScanRegExp:IPR002345; superfamily:IPR008957 YP_002938621.1 CytoplasmicMembrane, score:9.26; COG1316 Transcriptional regulator; HMMPfam:IPR004474; HMMTigr:IPR004474 YP_002938622.1 Cytoplasmic, score:8.87; COG5610 Predicted hydrolase (HAD superfamily); HMMPfam:IPR005834 YP_002938623.1 CytoplasmicMembrane, score:10.00; COG2148 Sugar transferases involved in lipopolysaccharide synthesis; KEGG:K00996 undecaprenyl-phosphate galactosephosphotransferase HMMPfam:IPR003362 YP_002938624.1 distantly related to b-glycosyltransferases; Cytoplasmic, score:8.87; COG1216 Predicted glycosyltransferases; KEGG:0narrowly conserved hypothetical protein with possible glycosyltransferase domain; HMMPfam:IPR001173 YP_002938625.1 Cytoplasmic, score:8.87; COG0562 UDP-galactopyranose mutase; KEGG:K01854 UDP-galactopyranose mutase HMMPfam:IPR003953; HMMPfam:IPR015899; HMMTigr:IPR004379 YP_002938626.1 Unknown cell location; KOG0791 Protein tyrosine phosphatase, contains fn3 domain; KEGG:K05698 protein tyrosine phosphatase, receptor type, J HMMPfam:IPR003961; HMMPfam:IPR007280; Gene3D:IPR008957; HMMSmart:IPR003961; superfamily:IPR008957 YP_002938627.1 Cytoplasmic, score:8.87; NOG37551 non supervised orthologous group; KEGG:K00075 MurB family protein HMMPfam:IPR001450; ScanRegExp:IPR001450; superfamily:IPR009051 YP_002938628.1 N-terminal domain related to b-glycosyltransferases and C-terminal domain distantly related to glycosyltransferases; CytoplasmicMembrane, score:7.80; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:0glycosyltransferase HMMPfam:IPR001173; HMMPfam:IPR001296 YP_002938629.1 CytoplasmicMembrane, score:9.99; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; KEGG:K01992 hypothetical protein; HMMPfam:IPR013525; FPrintScan:IPR013526 YP_002938630.1 CytoplasmicMembrane, score:9.99; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; KEGG:K09690 predicted ABC-type polysaccharide/polyol phosphate export system, permease protein; HMMPfam:IPR013525 YP_002938631.1 CytoplasmicMembrane, score:9.83; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; KEGG:K09691 predicted ABC-type polysaccharide/polyol phosphate export system, ATP-binding protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; superfamily:IPR008965 YP_002938632.1 Cytoplasmic, score:8.87; COG5610 Predicted hydrolase (HAD superfamily) YP_002938633.1 Cytoplasmic, score:8.87; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:0glycosyltransferase HMMPfam:IPR001173 YP_002938634.1 Cytoplasmic, score:8.87; COG0438 Glycosyltransferase; KEGG:0putative galactosyltransferase WbgM HMMPfam:IPR001296 YP_002938635.1 Unknown cell location; COG4886 Leucine-rich repeat (LRR) protein; HMMPfam:IPR013247; BlastProDom:IPR004829; HMMSmart:IPR003646 YP_002938636.1 Cytoplasmic, score:8.87; COG1109 Phosphomannomutase; KEGG:K03431 phosphoglucosamine mutase HMMPfam:IPR005843; HMMPfam:IPR005844; HMMPfam:IPR005845; HMMPfam:IPR005846; FPrintScan:IPR005841; HMMTigr:IPR006352; ScanRegExp:IPR002048; ScanRegExp:IPR005841 YP_002938637.1 CytoplasmicMembrane, score:7.80; COG4767 Glycopeptide antibiotics resistance protein; HMMPfam:IPR006976 YP_002938638.1 Unknown cell location; COG1316 Transcriptional regulator; HMMPfam:IPR004474; HMMTigr:IPR004474 YP_002938639.1 Unknown cell location; COG1376 Uncharacterized protein conserved in bacteria; HMMPfam:IPR005490; superfamily:IPR008964 YP_002938640.1 Cytoplasmic, score:8.87; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:0putative glycosyltransferase HMMPfam:IPR001173 YP_002938641.1 Cytoplasmic, score:8.87; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:0putative glycosyltransferase HMMPfam:IPR001173 YP_002938642.1 Cytoplasmic, score:8.87; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:0glycosyltransferase HMMPfam:IPR001173 YP_002938643.1 Cytoplasmic, score:9.98; COG1925 Phosphotransferase system, HPr-related proteins; KEGG:K02784 putative phosphotransferase system HPr protein; HMMPfam:IPR000032; BlastProDom:IPR000032; FPrintScan:IPR000032; Gene3D:IPR000032; HMMTigr:IPR005698; superfamily:IPR000032 YP_002938644.1 Unknown cell location; COG4856 Uncharacterized protein conserved in bacteria; HMMPfam:IPR012505 YP_002938645.1 CytoplasmicMembrane, score:7.63; COG1624 Uncharacterized conserved protein; HMMPfam:IPR003390; HMMPIR:IPR014046; HMMTigr:IPR014046 YP_002938646.1 CytoplasmicMembrane, score:9.97 YP_002938647.1 Unknown cell location YP_002938648.1 Cytoplasmic, score:8.87; NOG14256 non supervised orthologous group YP_002938649.1 Cytoplasmic, score:8.87; COG1040 Predicted amidophosphoribosyltransferases; KEGG:K02242 predicted amidophosphoribosyltransferase YP_002938650.1 Cytoplasmic, score:9.98; COG1077 Actin-like ATPase involved in cell morphogenesis; KEGG:K03569 cell shape determining protein, MreB/Mrl family; HMMPfam:IPR004753; FPrintScan:IPR001023; FPrintScan:IPR004753; HMMPanther:IPR001023; HMMTigr:IPR004753 YP_002938651.1 Cytoplasmic, score:8.87; COG0178 Excinuclease ATPase subunit; KEGG:K03701 excinuclease ABC, A subunit; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; HMMTigr:IPR004602; ScanRegExp:IPR003439 YP_002938652.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_002938653.1 Cytoplasmic, score:8.87; COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); KEGG:K03070 protein translocase subunit secA; HMMPfam:IPR001650; HMMPfam:IPR004027; HMMPfam:IPR011115; HMMPfam:IPR011116; HMMPfam:IPR011130; FPrintScan:IPR000185; HMMTigr:IPR000185; ScanRegExp:IPR000185 YP_002938654.1 Unknown cell location YP_002938655.1 Cytoplasmic, score:8.87; NOG17478 non supervised orthologous group YP_002938656.1 Extracellular, score:8.82 YP_002938657.1 involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme YP_002938658.1 Cytoplasmic, score:8.87; NOG06157 non supervised orthologous group; KEGG:K06410 dipicolinate synthase subunit A; HMMPfam:IPR006140; ScanRegExp:IPR000043 YP_002938659.1 Unknown cell location YP_002938660.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive YP_002938661.1 Cytoplasmic, score:8.87; COG0622 Predicted phosphoesterase; KEGG:0hypothetical protein; HMMPfam:IPR004843; HMMTigr:IPR000979 YP_002938662.1 Unknown cell location YP_002938663.1 Unknown cell location YP_002938664.1 CytoplasmicMembrane, score:9.49; COG2267 Lysophospholipase; KEGG:K01048 lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily HMMPfam:IPR000073 YP_002938665.1 Cytoplasmic, score:8.87; COG1387 Histidinol phosphatase and related hydrolases of the PHP family; KEGG:K04486 histidinol phosphate phosphatase family protein HMMPfam:IPR004013; HMMPanther:IPR010140; HMMTigr:IPR010140 YP_002938666.1 Cytoplasmic, score:8.87; COG0569 K+ transport systems, NAD-binding component; KEGG:K03499 potassium transporter peripheral membrane component; HMMPfam:IPR003148; HMMPfam:IPR006037; FPrintScan:IPR006036 YP_002938667.1 CytoplasmicMembrane, score:10.00; COG0168 Trk-type K+ transport systems, membrane components; KEGG:K03498 potassium uptake protein; HMMPfam:IPR003445 YP_002938668.1 CytoplasmicMembrane, score:9.99; NOG06495 non supervised orthologous group YP_002938669.1 CytoplasmicMembrane, score:9.75; COG1512 Beta-propeller domains of methanol dehydrogenase type YP_002938670.1 Cytoplasmic, score:8.87; COG2206 HD-GYP domain; KEGG:K07814 two-component system response regulator RpfG; HMMPfam:IPR006674; HMMSmart:IPR003607 YP_002938671.1 CytoplasmicMembrane, score:9.99; COG4905 Predicted membrane protein; KEGG:0metal dependent phosphohydrolase; HMMPfam:IPR010540 YP_002938672.1 CytoplasmicMembrane, score:9.49; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; KEGG:K06158 ABC transporter ATP-binding protein uup; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938673.1 Unknown cell location YP_002938674.1 Unknown cell location YP_002938675.1 Unknown cell location YP_002938676.1 Unknown cell location YP_002938677.1 Unknown cell location; COG0395 ABC-type sugar transport system, permease component; KEGG:K10190 sugar ABC transporter permease YP_002938678.1 Cytoplasmic, score:9.98; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; KEGG:K07471 K07506 transcriptional regulator, AraC family; HMMPfam:IPR000005; FPrintScan:IPR000005; Gene3D:IPR012287; HMMSmart:IPR000005; superfamily:IPR009057 YP_002938679.1 Cytoplasmic, score:8.87; COG3459 Cellobiose phosphorylase; KEGG:K00702 cellobiose-phosphorylase superfamily:IPR008928; superfamily:IPR011013 YP_002938680.1 CytoplasmicMembrane, score:9.82; COG3459 Cellobiose phosphorylase; KEGG:0N,N-diacetylchitobiose phosphorylase HMMPfam:IPR009342; HMMPfam:IPR010383; HMMPfam:IPR010403; ScanRegExp:IPR002052; superfamily:IPR008928; superfamily:IPR011013 YP_002938681.1 Unknown cell location; COG2273 Beta-glucanase/Beta-glucan synthetase; HMMPfam:IPR000757; Gene3D:IPR013320; superfamily:IPR008985 YP_002938682.1 Cytoplasmic, score:8.87; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K01198 xylan 1,4-beta-xylosidase HMMPfam:IPR000005; HMMPfam:IPR003313; FPrintScan:IPR000005; Gene3D:IPR012287; Gene3D:IPR014710; HMMSmart:IPR000005; ScanRegExp:IPR000005; superfamily:IPR009057; superfamily:IPR011051 YP_002938683.1 Cytoplasmic, score:8.87; COG1472 Beta-glucosidase-related glycosidases; KEGG:K01188 beta-glucosidase HMMPfam:IPR001764; HMMPfam:IPR002772; FPrintScan:IPR001764; superfamily:IPR002772 YP_002938684.1 CytoplasmicMembrane, score:9.75; NOG25278 non supervised orthologous group; HMMPfam:IPR012547 YP_002938685.1 CytoplasmicMembrane, score:9.99; NOG16658 non supervised orthologous group YP_002938686.1 Cytoplasmic, score:9.98; COG0148 Enolase; KEGG:K01689 enolase HMMPfam:IPR000941; BlastProDom:IPR000941; FPrintScan:IPR000941; HMMPanther:IPR000941; HMMTigr:IPR000941; ScanRegExp:IPR000941 YP_002938687.1 Cytoplasmic, score:8.87; COG2509 Uncharacterized FAD-dependent dehydrogenases; KEGG:0uncharacterized FAD-dependent dehydrogenase; HMMPfam:IPR013027; FPrintScan:IPR001100 YP_002938688.1 Cytoplasmic, score:8.87; COG3655 Predicted transcriptional regulator; KEGG:K07727 hypothetical protein; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002938689.1 CytoplasmicMembrane, score:9.99; NOG10987 non supervised orthologous group YP_002938690.1 Cytoplasmic, score:8.87 YP_002938691.1 Unknown cell location YP_002938692.1 Unknown cell location YP_002938693.1 Cytoplasmic, score:8.87; COG2091 Phosphopantetheinyl transferase; HMMPfam:IPR008278; superfamily:IPR008278 YP_002938694.1 CytoplasmicMembrane, score:10.00; COG1132 ABC-type multidrug transport system, ATPase and permease components; KEGG:K06147 ABC-type multidrug/protein/lipid transport system, ATPase component; HMMPfam:IPR001140; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938695.1 CytoplasmicMembrane, score:10.00; COG1132 ABC-type multidrug transport system, ATPase and permease components; KEGG:K06147 ABC-type multidrug/protein/lipid transport system, ATPase component; HMMPfam:IPR001140; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002938696.1 Unknown cell location; KOG3041 Nucleoside diphosphate-sugar hydrolase of the MutT (NUDIX) family; HMMPfam:IPR000086; Gene3D:IPR000086; superfamily:IPR015797 YP_002938697.1 Cytoplasmic, score:8.87; COG4912 Predicted DNA alkylation repair enzyme YP_002938698.1 Unknown cell location; COG3049 Penicillin V acylase and related amidases; KEGG:K01442 choloylglycine hydrolase HMMPfam:IPR003199 YP_002938699.1 Cytoplasmic, score:8.87; COG0703 Shikimate kinase; KEGG:K00891 chorismate mutase HMMPfam:IPR000623; HMMPfam:IPR002701; FPrintScan:IPR000623; ScanRegExp:IPR000623; superfamily:IPR002701 YP_002938700.1 Cytoplasmic, score:8.87; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component; HMMPfam:IPR004682; HMMTigr:IPR004682 YP_002938701.1 CytoplasmicMembrane, score:9.99; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component; HMMPfam:IPR010656; HMMTigr:IPR004681 YP_002938702.1 CytoplasmicMembrane, score:9.97; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component; HMMPfam:IPR007387 YP_002938703.1 Unknown cell location YP_002938704.1 Cytoplasmic, score:8.87; COG0710 3-dehydroquinate dehydratase; KEGG:K01688 3-dehydroquinate dehydratase HMMPfam:IPR001381; BlastProDom:IPR001381; Gene3D:IPR013785; HMMTigr:IPR001381; ScanRegExp:IPR001381 YP_002938705.1 CytoplasmicMembrane, score:10.00; COG0477 Permeases of the major facilitator superfamily; HMMPfam:IPR011701; ScanRegExp:IPR005829 YP_002938706.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_002938707.1 Cytoplasmic, score:9.98; COG0583 Transcriptional regulator; KEGG:K09681 transcription activator of glutamate synthase(LysR family); HMMPfam:IPR000847; HMMPfam:IPR005119; FPrintScan:IPR000847; Gene3D:IPR011991 YP_002938708.1 Cytoplasmic, score:9.98; COG0583 Transcriptional regulator; KEGG:K09681 transcription activator of glutamate synthase(LysR family); HMMPfam:IPR000847; HMMPfam:IPR005119; FPrintScan:IPR000847; Gene3D:IPR011991 YP_002938709.1 Unknown cell location YP_002938710.1 Cytoplasmic, score:8.87; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; KEGG:K00359 NADH:flavin oxidoreductase HMMPfam:IPR001155; HMMPfam:IPR001327; HMMPfam:IPR004792; BlastProDom:IPR001327; FPrintScan:IPR000103; FPrintScan:IPR000759; FPrintScan:IPR013027; Gene3D:IPR013785 YP_002938711.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 RNA-directed DNA polymerase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002938712.1 Extracellular, score:8.82 YP_002938713.1 catalyzes the conversion of shikimate to 3-dehydroshikimate YP_002938714.1 Unknown cell location; NOG16557 non supervised orthologous group; ScanRegExp:IPR001589 YP_002938715.1 Unknown cell location YP_002938716.1 Cytoplasmic, score:8.87; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:0MutT/NUDIX family protein HMMPfam:IPR000086; BlastProDom:IPR002667; FPrintScan:IPR000086; Gene3D:IPR000086; ScanRegExp:IPR000086; superfamily:IPR015797 YP_002938717.1 Cytoplasmic, score:9.65; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; KEGG:K03686 chaperone DnaJ domain protein; HMMPfam:IPR001623; HMMPfam:IPR002939; FPrintScan:IPR003095; Gene3D:IPR001623; HMMPanther:IPR015609; HMMSmart:IPR001623; ScanRegExp:IPR001623; superfamily:IPR001623; superfamily:IPR008971 YP_002938718.1 Unknown cell location; COG0071 Molecular chaperone (small heat shock protein); HMMPfam:IPR002068; superfamily:IPR008978 YP_002938719.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR000977; ScanRegExp:IPR003439 YP_002938720.1 CytoplasmicMembrane, score:9.99 YP_002938721.1 CytoplasmicMembrane, score:10.00; ScanRegExp:IPR000276 YP_002938722.1 Unknown cell location YP_002938723.1 Unknown cell location YP_002938724.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 ABC transporter (ATP-binding protein); HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938725.1 CytoplasmicMembrane, score:9.99 YP_002938726.1 CytoplasmicMembrane, score:9.99 YP_002938727.1 Unknown cell location YP_002938728.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002938729.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938730.1 CytoplasmicMembrane, score:9.99 YP_002938731.1 CytoplasmicMembrane, score:9.99 YP_002938732.1 Unknown cell location YP_002938733.1 Extracellular, score:8.82 YP_002938734.1 CytoplasmicMembrane, score:9.99; ScanRegExp:IPR002355 YP_002938735.1 Cytoplasmic, score:9.65; COG3279 Response regulator of the LytR/AlgR family; KEGG:K02477 sensory transduction protein LytT; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938736.1 CytoplasmicMembrane, score:9.26; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; superfamily:IPR003594 YP_002938737.1 Unknown cell location YP_002938738.1 Cytoplasmic, score:8.87; NOG16227 non supervised orthologous group YP_002938739.1 Unknown cell location; HMMTigr:IPR006442 YP_002938740.1 Extracellular, score:8.82 YP_002938741.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; superfamily:IPR011114 YP_002938742.1 Cytoplasmic, score:8.87; COG1472 Beta-glucosidase-related glycosidases; KEGG:K05349 beta-glucosidase HMMPfam:IPR001764; HMMPfam:IPR002772; FPrintScan:IPR001764; ScanRegExp:IPR001764; ScanRegExp:IPR002198; superfamily:IPR002772 YP_002938743.1 Cytoplasmic, score:8.87; COG0673 Predicted dehydrogenases and related proteins; KEGG:0possible dehydrogenase HMMPfam:IPR000683; HMMPfam:IPR004104 YP_002938744.1 Cytoplasmic, score:8.87; COG1082 Sugar phosphate isomerases/epimerases; KEGG:K01151 K01741 AP-endonuclease/AP-lyase HMMPfam:IPR012307; Gene3D:IPR013022 YP_002938745.1 Cytoplasmic, score:8.87; COG1082 Sugar phosphate isomerases/epimerases; HMMPfam:IPR012307; Gene3D:IPR013022 YP_002938746.1 Cytoplasmic, score:8.87; COG0673 Predicted dehydrogenases and related proteins; KEGG:0hypothetical oxidoreductase YdgJ HMMPfam:IPR000683; HMMPfam:IPR004104 YP_002938747.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K02027 sugar ABC transporter substrate-binding protein; HMMPfam:IPR006059 YP_002938748.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K02026 integral membrane protein; HMMPfam:IPR000515 YP_002938749.1 CytoplasmicMembrane, score:9.99; COG4209 ABC-type polysaccharide transport system, permease component; KEGG:K02025 hypothetical protein; HMMPfam:IPR000515 YP_002938750.1 Cytoplasmic, score:9.98; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; KEGG:K07720 two-component response regulator; HMMPfam:IPR000005; HMMPfam:IPR001789; BlastProDom:IPR001789; FPrintScan:IPR000005; Gene3D:IPR012287; HMMSmart:IPR000005; HMMSmart:IPR001789; superfamily:IPR009057; superfamily:IPR011006 YP_002938751.1 Cytoplasmic, score:8.87; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; KEGG:K07718 two-component sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR010559; Gene3D:IPR003594; superfamily:IPR003594 YP_002938752.1 Unknown cell location YP_002938753.1 Extracellular, score:8.82 YP_002938754.1 Cytoplasmic, score:8.87; NOG14451 non supervised orthologous group; KEGG:K00945 cytidylate kinase YP_002938755.1 CytoplasmicMembrane, score:9.99; COG1346 Putative effector of murein hydrolase; KEGG:K05339 LrgB-like family protein; HMMPfam:IPR007300 YP_002938756.1 CytoplasmicMembrane, score:9.99; COG1380 Putative effector of murein hydrolase LrgA; KEGG:K05338 putative effector of murein hydrolase LrgA; HMMPfam:IPR005538; BlastProDom:IPR005538 YP_002938757.1 CytoplasmicMembrane, score:9.99; COG3619 Predicted membrane protein; HMMPfam:IPR010699 YP_002938758.1 CytoplasmicMembrane, score:9.97; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; KEGG:K01745 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) HMMPfam:IPR000160; HMMPfam:IPR001633; HMMSmart:IPR000160; HMMSmart:IPR001633; HMMTigr:IPR000160 YP_002938759.1 mitochondrial delta subunit-like protein; Cytoplasmic, score:8.87; COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); KEGG:K02114 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit) HMMPfam:IPR001469; BlastProDom:IPR001469; Gene3D:IPR001469; HMMPanther:IPR001469; HMMTigr:IPR001469; superfamily:IPR001469 YP_002938760.1 Cytoplasmic, score:8.87; COG0055 F0F1-type ATP synthase, beta subunit; KEGG:K02112 F0F1 ATP synthase subunit beta HMMPfam:IPR000194; HMMPfam:IPR000793; HMMPfam:IPR004100; HMMPanther:IPR005722; HMMSmart:IPR003593; HMMTigr:IPR005722; ScanRegExp:IPR000194; superfamily:IPR000793; superfamily:IPR004100 YP_002938761.1 Cytoplasmic, score:8.87; COG0224 F0F1-type ATP synthase, gamma subunit; KEGG:K01550 F0F1 ATP synthase subunit gamma HMMPfam:IPR000131; FPrintScan:IPR000131; HMMPanther:IPR000131; HMMTigr:IPR000131; ScanRegExp:IPR000131; superfamily:IPR000131 YP_002938762.1 Cytoplasmic, score:8.87; COG0056 F0F1-type ATP synthase, alpha subunit; KEGG:K02111 ATP synthase F1, alpha subunit HMMPfam:IPR000194; HMMPfam:IPR000793; HMMPfam:IPR004100; HMMPanther:IPR005294; HMMTigr:IPR005294; ScanRegExp:IPR000194; superfamily:IPR000793; superfamily:IPR004100 YP_002938763.1 Cytoplasmic, score:8.87; COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein); HMMPfam:IPR000711; FPrintScan:IPR000711; HMMPanther:IPR000711; HMMTigr:IPR000711; superfamily:IPR000711 YP_002938764.1 Cytoplasmic, score:8.87; COG0711 F0F1-type ATP synthase, subunit b; HMMPfam:IPR002146; HMMTigr:IPR005864 YP_002938765.1 Unknown cell location; COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; HMMPfam:IPR002379; FPrintScan:IPR000454; Gene3D:IPR002379; HMMTigr:IPR005953; ScanRegExp:IPR000454; superfamily:IPR002379 YP_002938766.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_002938767.1 CytoplasmicMembrane, score:9.99; COG0428 Predicted divalent heavy-metal cations transporter; KEGG:K07238 zinc transporter; HMMPfam:IPR003689 YP_002938768.1 Cytoplasmic, score:8.87; NOG28272 non supervised orthologous group YP_002938769.1 Cytoplasmic, score:8.87; NOG28272 non supervised orthologous group; superfamily:IPR009078 YP_002938770.1 Cytoplasmic, score:8.87; NOG13188 non supervised orthologous group YP_002938771.1 Cytoplasmic, score:8.87; COG0346 Lactoylglutathione lyase and related lyases; HMMPfam:IPR004360 YP_002938772.1 Unknown cell location YP_002938773.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_002938774.1 CytoplasmicMembrane, score:7.59; COG2199 FOG: GGDEF domain; KEGG:0sensory transduction protein kinase HMMPfam:IPR000160; HMMSmart:IPR000160; HMMTigr:IPR000160 YP_002938775.1 Cytoplasmic, score:8.87; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; KEGG:0similar to hypothetical RNA methyltransferase HMMPfam:IPR002792; HMMPfam:IPR013216; HMMTigr:IPR001566; ScanRegExp:IPR010280 YP_002938776.1 Cytoplasmic, score:8.87; COG3481 Predicted HD-superfamily hydrolase; KEGG:K03698 HD-superfamily hydrolase; HMMPfam:IPR006674; HMMSmart:IPR003607; HMMTigr:IPR006675 YP_002938777.1 Unknown cell location; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; KEGG:0HtrA-like serine protease (with PDZ domain) HMMPfam:IPR001478; FPrintScan:IPR001940; HMMSmart:IPR001478; superfamily:IPR001478; superfamily:IPR009003 YP_002938778.1 Cytoplasmic, score:8.87; COG1193 Mismatch repair ATPase (MutS family); KEGG:K07456 DNA mismatch repair protein; HMMPfam:IPR000432; HMMPfam:IPR002625; BlastProDom:IPR000432; HMMPIR:IPR005747; HMMPanther:IPR000432; HMMSmart:IPR000432; HMMSmart:IPR002625; HMMSmart:IPR007696; HMMTigr:IPR005747; ScanRegExp:IPR000432 YP_002938779.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07775 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938780.1 CytoplasmicMembrane, score:9.82; COG0642 Signal transduction histidine kinase; KEGG:0sensory transduction histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; FPrintScan:IPR004358; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003660; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002938781.1 Unknown cell location YP_002938782.1 Unknown cell location YP_002938783.1 Cytoplasmic, score:10.00; COG0173 Aspartyl-tRNA synthetase; KEGG:K01876 aspartyl-tRNA synthetase HMMPfam:IPR004115; HMMPfam:IPR004364; HMMPfam:IPR004365; FPrintScan:IPR002312; Gene3D:IPR012340; HMMPanther:IPR004364; HMMPanther:IPR004524; HMMTigr:IPR004524 YP_002938784.1 Cytoplasmic, score:10.00; COG0124 Histidyl-tRNA synthetase; KEGG:K01891 histidine--tRNA ligase HMMPfam:IPR002314; HMMPIR:IPR004516; HMMPanther:IPR015805 YP_002938785.1 Unknown cell location; NOG18738 non supervised orthologous group; KEGG:K01173 extracellular/cell surface DNA-entry nuclease precursor YP_002938786.1 Unknown cell location YP_002938787.1 CytoplasmicMembrane, score:10.00; COG1264 Phosphotransferase system IIB components; KEGG:K02803 K02804 PTS system, N-acetylglucosamine-specific IIBC component HMMPfam:IPR001996; HMMPfam:IPR003352; Gene3D:IPR001996; HMMTigr:IPR011535; ScanRegExp:IPR001996; superfamily:IPR001996 YP_002938788.1 CytoplasmicMembrane, score:9.82; COG2190 Phosphotransferase system IIA components; KEGG:K02755 K02756 K02757 PTS system, beta-glucoside-specific IIABC component HMMPfam:IPR001127; BlastProDom:IPR001127; HMMTigr:IPR001127; ScanRegExp:IPR001127; superfamily:IPR011055 YP_002938789.1 Cytoplasmic, score:8.87; COG1820 N-acetylglucosamine-6-phosphate deacetylase; KEGG:K01443 N-acetylglucosamine-6-phosphate deacetylase HMMPfam:IPR006680; BlastProDom:IPR011550; HMMTigr:IPR003764; superfamily:IPR011059 YP_002938790.1 Cytoplasmic, score:8.87; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; KEGG:K02564 glucosamine-6-phosphate deaminase HMMPfam:IPR006148; HMMPanther:IPR004547; HMMTigr:IPR004547; ScanRegExp:IPR004547 YP_002938791.1 CytoplasmicMembrane, score:9.75 YP_002938792.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_002938793.1 Cytoplasmic, score:8.87; COG0491 Zn-dependent hydrolases, including glyoxylases; KEGG:K01069 hydroxyacylglutathione hydrolase HMMPfam:IPR001279 YP_002938794.1 Cytoplasmic, score:8.87; COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; KEGG:K00951 (p)ppGpp synthetase I, SpoT/RelA HMMPfam:IPR002912; HMMPfam:IPR004095; HMMPfam:IPR006674; HMMPfam:IPR007685; Gene3D:IPR012675; HMMSmart:IPR003607; HMMTigr:IPR004811; superfamily:IPR012676 YP_002938795.1 Cytoplasmic, score:9.98; COG1940 Transcriptional regulator/sugar kinase; KEGG:K00845 transcriptional regulator/sugar kinase HMMPfam:IPR000600; HMMTigr:IPR004654; ScanRegExp:IPR000600 YP_002938796.1 distantly related to b-glycosyltransferases; Cytoplasmic, score:8.87; COG1216 Predicted glycosyltransferases; KEGG:0predicted glycosyltransferase; HMMPfam:IPR001173 YP_002938797.1 Cytoplasmic, score:8.87; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; KEGG:K01951 guanosine monophosphate synthetase GuaA HMMPfam:IPR000182 YP_002938798.1 Cytoplasmic, score:9.98; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; KEGG:K01802 peptidylprolyl isomerase HMMPfam:IPR002130; FPrintScan:IPR002130; Gene3D:IPR002130; HMMPanther:IPR002130; ScanRegExp:IPR002130; superfamily:IPR015891 YP_002938799.1 Cytoplasmic, score:9.98; COG0770 UDP-N-acetylmuramyl pentapeptide synthase; KEGG:K01929 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase HMMPfam:IPR000713; HMMPfam:IPR004101; HMMPfam:IPR013221; HMMPanther:IPR005863; HMMTigr:IPR005863 YP_002938800.1 Cytoplasmic, score:9.98; COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; KEGG:K01921 D-alanine--D-alanine ligase HMMPfam:IPR011095; HMMPfam:IPR011127; Gene3D:IPR013816; Gene3D:IPR013817; HMMTigr:IPR005905; ScanRegExp:IPR000291 YP_002938801.1 Unknown cell location YP_002938802.1 Cytoplasmic, score:8.87 YP_002938803.1 Cytoplasmic, score:8.87; COG3666 Transposase and inactivated derivatives; HMMPfam:IPR002559 YP_002938804.1 Extracellular, score:8.82 YP_002938805.1 Cytoplasmic, score:8.87; COG1544 Ribosome-associated protein Y (PSrp-1); KEGG:K05808 ribosome-associated protein Y (PSrp-1); HMMPfam:IPR003489; HMMTigr:IPR003489 YP_002938806.1 CytoplasmicMembrane, score:9.49; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; KEGG:K06158 ABC transporter, ATP-binding protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938807.1 Unknown cell location; COG2607 Predicted ATPase (AAA+ superfamily); KEGG:0ATPase with chaperone activity, ATP-binding domain, diverged; HMMPfam:IPR008533 YP_002938808.1 CytoplasmicMembrane, score:9.49; COG0642 Signal transduction histidine kinase; KEGG:K02484 hypothetical protein HMMPfam:IPR003594; HMMPfam:IPR003661; FPrintScan:IPR004358; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002938809.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07657 DNA-binding response regulator, OmpR family (Rec-wHTH domains); HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; Gene3D:IPR011991; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938810.1 Cytoplasmic, score:9.98; COG0704 Phosphate uptake regulator; KEGG:K02039 phosphate uptake regulator, PhoU; HMMPfam:IPR008170; HMMTigr:IPR008170 YP_002938811.1 CytoplasmicMembrane, score:9.49; COG1117 ABC-type phosphate transport system, ATPase component; KEGG:K02036 phosphate ABC transporter, ATP-binding protein HMMPfam:IPR003439; BlastProDom:IPR003439; HMMPanther:IPR005670; HMMSmart:IPR003593; HMMTigr:IPR005670; ScanRegExp:IPR003439 YP_002938812.1 Cytoplasmic, score:9.98; COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; KEGG:K00375 hypothetical protein; HMMPfam:IPR000524; Gene3D:IPR011991; Gene3D:IPR015421; HMMSmart:IPR000524; superfamily:IPR015424 YP_002938813.1 Unknown cell location YP_002938814.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_002938815.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate YP_002938816.1 CytoplasmicMembrane, score:10.00; COG0642 Signal transduction histidine kinase; KEGG:0hypothetical protein HMMPfam:IPR003594; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002938817.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07659 two-component response regulator; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938818.1 CytoplasmicMembrane, score:10.00; COG0581 ABC-type phosphate transport system, permease component; KEGG:K02038 phosphate ABC transporter, permease protein; HMMPfam:IPR000515; HMMTigr:IPR005672 YP_002938819.1 CytoplasmicMembrane, score:10.00; COG0573 ABC-type phosphate transport system, permease component; KEGG:K02037 phosphate ABC transporter, permease protein; HMMPfam:IPR000515; HMMTigr:IPR011864 YP_002938820.1 Unknown cell location; COG0226 ABC-type phosphate transport system, periplasmic component; KEGG:K02040 phosphate ABC transporter, periplasmic phosphate-binding protein; HMMPfam:IPR006059; HMMTigr:IPR011862 YP_002938821.1 Extracellular, score:8.82 YP_002938822.1 Cytoplasmic, score:8.87; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_002938823.1 CytoplasmicMembrane, score:9.97; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; KEGG:0sensory transduction protein kinase HMMPfam:IPR001633; HMMSmart:IPR001633 YP_002938824.1 Cytoplasmic, score:9.65; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); KEGG:K00059 3-oxoacyl-[acyl-carrier-protein] reductase HMMPfam:IPR002198; FPrintScan:IPR002198; FPrintScan:IPR002347; HMMPanther:IPR002198; ScanRegExp:IPR002198 YP_002938825.1 Unknown cell location; superfamily:IPR010982 YP_002938826.1 Cytoplasmic, score:9.98; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; KEGG:K02438 glycogen debranching enzyme GlgX HMMPfam:IPR004193; HMMPfam:IPR006047; Gene3D:IPR013781; Gene3D:IPR013783; HMMSmart:IPR006589; HMMTigr:IPR011837; superfamily:IPR014756 YP_002938827.1 Unknown cell location; COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation); KEGG:K07282 poly-gamma-glutamate biosynthesis (capsule formation) YP_002938828.1 Cytoplasmic, score:8.87; COG0500 SAM-dependent methyltransferases; HMMPfam:IPR013216 YP_002938829.1 Cytoplasmic, score:8.87; COG0640 Predicted transcriptional regulators; KEGG:K03892 probable transcriptional regulator; HMMPfam:IPR001845; FPrintScan:IPR001845; Gene3D:IPR011991; HMMSmart:IPR001845; ScanRegExp:IPR001845 YP_002938830.1 CytoplasmicMembrane, score:10.00; COG2217 Cation transport ATPase; KEGG:0cation-transporting ATPase, P-type HMMPfam:IPR005834; HMMPfam:IPR008250; FPrintScan:IPR000695; FPrintScan:IPR001757; HMMPanther:IPR001757; HMMTigr:IPR001757; HMMTigr:IPR006404; HMMTigr:IPR006416; ScanRegExp:IPR001757 YP_002938831.1 Unknown cell location; COG2217 Cation transport ATPase; HMMPfam:IPR006121; HMMPanther:IPR001757; superfamily:IPR006121 YP_002938832.1 Cytoplasmic, score:8.87 YP_002938833.1 catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity YP_002938834.1 Cytoplasmic, score:8.87; COG1896 Predicted hydrolases of HD superfamily; KEGG:K07023 predicted hydrolase of HD superfamily; HMMPfam:IPR006674 YP_002938835.1 Unknown cell location YP_002938836.1 Cytoplasmic, score:8.87; COG1106 Predicted ATPases; KEGG:0abortive infection protein, putative YP_002938837.1 Cytoplasmic, score:8.87; COG0159 Tryptophan synthase alpha chain; KEGG:K01695 tryptophan synthase, alpha subunit HMMPfam:IPR002028; BlastProDom:IPR002028; Gene3D:IPR013785; HMMTigr:IPR002028; superfamily:IPR011060 YP_002938838.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002938839.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_002938840.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002938841.1 Cytoplasmic, score:8.87; COG0512 Anthranilate/para-aminobenzoate synthases component II; KEGG:K01656 anthranilate/para-aminobenzoate synthase component II, TrpG HMMPfam:IPR000991; FPrintScan:IPR001317; FPrintScan:IPR006220; FPrintScan:IPR011702; HMMTigr:IPR006221; ScanRegExp:IPR012998 YP_002938842.1 Cytoplasmic, score:8.87; COG0147 Anthranilate/para-aminobenzoate synthases component I; KEGG:K01656 anthranilate/para-aminobenzoate synthase component I, TrpE HMMPfam:IPR006805; HMMPfam:IPR015890; BlastProDom:IPR005801; FPrintScan:IPR005801; HMMPanther:IPR005801; HMMTigr:IPR005256 YP_002938843.1 Extracellular, score:8.82 YP_002938844.1 Unknown cell location YP_002938845.1 Cytoplasmic, score:8.87; NOG36449 non supervised orthologous group; HMMPfam:IPR000182 YP_002938846.1 Cytoplasmic, score:8.87; COG0826 Collagenase and related proteases YP_002938847.1 CytoplasmicMembrane, score:7.80; NOG13752 non supervised orthologous group YP_002938848.1 Unknown cell location YP_002938849.1 Cytoplasmic, score:8.87; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; KEGG:0hypothetical protein; HMMPfam:IPR000825 YP_002938850.1 CytoplasmicMembrane, score:9.49; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component; KEGG:K09013 ABC transporter ATP-binding protein; HMMPfam:IPR000432; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMPanther:IPR010230; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938851.1 Cytoplasmic, score:8.87; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; KEGG:K03825 hypothetical protein HMMPfam:IPR000182 YP_002938852.1 CytoplasmicMembrane, score:9.26; NOG14245 non supervised orthologous group YP_002938853.1 Cytoplasmic, score:9.98; COG0526 Thiol-disulfide isomerase and thioredoxins; KEGG:K03671 thiol-disulfide isomerase and thioredoxin; HMMPfam:IPR013766; FPrintScan:IPR006662; Gene3D:IPR012335; HMMPanther:IPR015467; HMMTigr:IPR005746; ScanRegExp:IPR006662; superfamily:IPR012336 YP_002938854.1 Cytoplasmic, score:8.87; COG0006 Xaa-Pro aminopeptidase; KEGG:K01262 Xaa-Pro aminopeptidase, putative HMMPfam:IPR000994; HMMPfam:IPR007865; Gene3D:IPR000994; HMMPanther:IPR000994; ScanRegExp:IPR001131 YP_002938855.1 forms a direct contact with the tRNA during translation YP_002938856.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002938857.1 Extracellular, score:8.82 YP_002938858.1 CytoplasmicMembrane, score:9.99; COG1696 Predicted membrane protein involved in D-alanine export; KEGG:0alginate biosynthesis protein AlgI HMMPfam:IPR004299 YP_002938859.1 Unknown cell location; superfamily:IPR013830 YP_002938860.1 Cytoplasmic, score:8.87; COG0101 Pseudouridylate synthase; KEGG:K06043 tRNA pseudouridine synthase A HMMPfam:IPR001406; Gene3D:IPR001406; HMMPanther:IPR001406; HMMTigr:IPR001406 YP_002938861.1 CytoplasmicMembrane, score:9.99; COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; KEGG:K02008 cobalt transport protein; HMMPfam:IPR003339 YP_002938862.1 CytoplasmicMembrane, score:9.49; COG1122 ABC-type cobalt transport system, ATPase component; KEGG:K02006 ABC-type cobalt transport system, ATPase component; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938863.1 CytoplasmicMembrane, score:9.49; COG1122 ABC-type cobalt transport system, ATPase component; KEGG:K02006 ABC transporter, ATP-binding protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938864.1 Cytoplasmic, score:8.87; COG0219 Predicted rRNA methylase (SpoU class); KEGG:K03216 RNA methyltransferase, TrmH family, group 2 HMMPfam:IPR001537; BlastProDom:IPR001537 YP_002938865.1 Cytoplasmic, score:8.87; COG0436 Aspartate/tyrosine/aromatic aminotransferase; KEGG:K00811 aspartate aminotransferase HMMPfam:IPR004839; Gene3D:IPR015421; ScanRegExp:IPR004838; superfamily:IPR015424 YP_002938866.1 Cytoplasmic, score:8.87; COG1522 Transcriptional regulators; KEGG:K03718 transcriptional regulatory protein, AsnC family (AsnC); HMMPfam:IPR000485; HMMSmart:IPR000485; superfamily:IPR011008 YP_002938867.1 Unknown cell location; COG0309 Hydrogenase maturation factor; KEGG:K04655 hydrogenase expression/formation protein; HMMPfam:IPR000728; HMMPfam:IPR010918 YP_002938868.1 Unknown cell location; COG2720 Uncharacterized vancomycin resistance protein; HMMPfam:IPR007391 YP_002938869.1 Unknown cell location YP_002938870.1 Cytoplasmic, score:8.87; COG2176 DNA polymerase III, alpha subunit (gram-positive type); KEGG:K00961 DNA polymerase III, epsilon subunit HMMPfam:IPR013520; HMMSmart:IPR006055; HMMTigr:IPR006054; superfamily:IPR012337 YP_002938871.1 Cytoplasmic, score:8.87; COG1032 Fe-S oxidoreductase; KEGG:K04034 magnesium-protoporphyrin IX monomethyl ester oxidative cyclase HMMPfam:IPR006158; HMMPfam:IPR007197; HMMPanther:IPR005839; HMMSmart:IPR006638; ScanRegExp:IPR001547; superfamily:IPR006158 YP_002938872.1 Cytoplasmic, score:8.87; NOG17530 non supervised orthologous group; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002938873.1 Cytoplasmic, score:8.87; COG4679 Phage-related protein; HMMPfam:IPR009241 YP_002938874.1 CytoplasmicMembrane, score:9.99; COG1266 Predicted metal-dependent membrane protease; KEGG:0conserved membrane protein, possible homolog of CaaX-like membrane endopeptidase; HMMPfam:IPR003675 YP_002938875.1 CytoplasmicMembrane, score:9.97; COG1971 Predicted membrane protein YP_002938876.1 Cellwall, score:9.18; COG2409 Predicted drug exporters of the RND superfamily; KEGG:K01421 transmembrane protein YP_002938877.1 CytoplasmicMembrane, score:9.99; COG1033 Predicted exporters of the RND superfamily; KEGG:0hypothetical protein YP_002938878.1 Unknown cell location YP_002938879.1 Cytoplasmic, score:8.87; COG1309 Transcriptional regulator; HMMPfam:IPR001647; superfamily:IPR009057 YP_002938880.1 Cytoplasmic, score:8.87 YP_002938881.1 CytoplasmicMembrane, score:9.99; COG3247 Uncharacterized conserved protein YP_002938882.1 Cytoplasmic, score:8.87 YP_002938883.1 Cytoplasmic, score:8.87; NOG09621 non supervised orthologous group; HMMPfam:IPR000086; FPrintScan:IPR000086; Gene3D:IPR000086; ScanRegExp:IPR000086; superfamily:IPR015797 YP_002938884.1 Cytoplasmic, score:8.87 YP_002938885.1 Cytoplasmic, score:8.87; NOG14429 non supervised orthologous group YP_002938886.1 Cytoplasmic, score:8.87; superfamily:IPR009057 YP_002938887.1 Unknown cell location YP_002938888.1 Unknown cell location YP_002938889.1 Unknown cell location; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_002938890.1 Cytoplasmic, score:8.87; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; KEGG:0RNA methyltransferase HMMPfam:IPR004398; HMMTigr:IPR001566; ScanRegExp:IPR010280 YP_002938891.1 Cytoplasmic, score:8.87; COG1686 D-alanyl-D-alanine carboxypeptidase; KEGG:K01286 predicted D-alanyl-D-alanine carboxypeptidase precursor HMMPfam:IPR001967; superfamily:IPR012338 YP_002938892.1 CytoplasmicMembrane, score:9.99; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; HMMPfam:IPR000620 YP_002938893.1 Unknown cell location; COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats YP_002938894.1 Cytoplasmic, score:8.87; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; KEGG:K03088 putative RNA polymerase sigma factor (ECF subfamily); HMMPfam:IPR007627; HMMPfam:IPR013249; HMMTigr:IPR014284; superfamily:IPR013324; superfamily:IPR013325 YP_002938895.1 CytoplasmicMembrane, score:10.00 YP_002938896.1 Unknown cell location YP_002938897.1 Cytoplasmic, score:8.87; NOG18392 non supervised orthologous group YP_002938898.1 CytoplasmicMembrane, score:8.80; COG0515 Serine/threonine protein kinase; KEGG:K08884 serine/threonine protein kinase fused to TPR repeats domain HMMPfam:IPR000719; BlastProDom:IPR000719; HMMSmart:IPR002290; ScanRegExp:IPR008271; superfamily:IPR011009 YP_002938899.1 Unknown cell location YP_002938900.1 Cytoplasmic, score:8.87 YP_002938901.1 CytoplasmicMembrane, score:9.99; COG1266 Predicted metal-dependent membrane protease; KEGG:0CAAX amino terminal protease family protein; HMMPfam:IPR003675; ScanRegExp:IPR000943 YP_002938902.1 CytoplasmicMembrane, score:9.99; NOG08361 non supervised orthologous group; KEGG:K01992 membrane protein, putative; HMMPfam:IPR013525 YP_002938903.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K01990 ABC transport ATP-binding subunit; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002938904.1 Unknown cell location YP_002938905.1 CytoplasmicMembrane, score:9.99; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_002938906.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 YcbN; HMMPfam:IPR003439; BlastProDom:IPR000432; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938907.1 Cytoplasmic, score:8.87; COG1309 Transcriptional regulator; HMMPfam:IPR001647; Gene3D:IPR012287; superfamily:IPR009057 YP_002938908.1 Unknown cell location; COG1598 Uncharacterized conserved protein; HMMPfam:IPR005357 YP_002938909.1 Cytoplasmic, score:9.98; COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family; KEGG:0NADH-dependent butanol dehydrogenase A (BDH I) HMMPfam:IPR001670; ScanRegExp:IPR001670 YP_002938910.1 Unknown cell location; COG0716 Flavodoxins YP_002938911.1 Cytoplasmic, score:8.87; COG3910 Predicted ATPase; HMMSmart:IPR003593 YP_002938912.1 Unknown cell location YP_002938913.1 Cytoplasmic, score:8.87 YP_002938914.1 CytoplasmicMembrane, score:9.75 YP_002938915.1 CytoplasmicMembrane, score:9.75 YP_002938916.1 CytoplasmicMembrane, score:9.97 YP_002938917.1 Extracellular, score:8.82 YP_002938918.1 CytoplasmicMembrane, score:9.99 YP_002938919.1 Cytoplasmic, score:8.87 YP_002938920.1 Unknown cell location YP_002938921.1 CytoplasmicMembrane, score:9.75; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; KEGG:K06147 transporter, truncation YP_002938922.1 CytoplasmicMembrane, score:9.99; COG1266 Predicted metal-dependent membrane protease; HMMPfam:IPR003675 YP_002938923.1 Unknown cell location YP_002938924.1 CytoplasmicMembrane, score:10.00; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; KEGG:K06147 transporter, truncation; HMMPfam:IPR001140; HMMPfam:IPR003439; HMMPfam:IPR005074; BlastProDom:IPR003439; HMMSmart:IPR003593; HMMTigr:IPR005897; ScanRegExp:IPR003439 YP_002938925.1 Unknown cell location; COG5492 Bacterial surface proteins containing Ig-like domains; HMMPfam:IPR003343; HMMSmart:IPR003343; superfamily:IPR008964 YP_002938926.1 Unknown cell location; COG0845 Membrane-fusion protein YP_002938927.1 CytoplasmicMembrane, score:9.99 YP_002938928.1 Unknown cell location YP_002938929.1 Unknown cell location YP_002938930.1 Cytoplasmic, score:8.87 YP_002938931.1 Unknown cell location YP_002938932.1 Unknown cell location; COG3279 Response regulator of the LytR/AlgR family; KEGG:K02477 two-component response regulator, LytR/AlgR family; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; superfamily:IPR011006 YP_002938933.1 CytoplasmicMembrane, score:9.99; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; HMMPfam:IPR003594; Gene3D:IPR003594; superfamily:IPR003594 YP_002938934.1 Unknown cell location YP_002938935.1 Cytoplasmic, score:8.87; COG1092 Predicted SAM-dependent methyltransferases; KEGG:K06969 putative methyltransferase; HMMPfam:IPR007848; HMMSmart:IPR002478 YP_002938936.1 Cytoplasmic, score:8.87; COG0463 Glycosyltransferases involved in cell wall biogenesis; KEGG:K00694 putative beta 1,4 glucosyltransferase HMMPfam:IPR001173 YP_002938937.1 Cytoplasmic, score:8.87; COG0427 Acetyl-CoA hydrolase; KEGG:04-hydroxybutyrate coenzyme A transferase HMMPfam:IPR003702; HMMPanther:IPR003702 YP_002938938.1 Cytoplasmic, score:8.87; COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain; KEGG:0truncated alanine-tRNA ligase; HMMPfam:IPR003156; HMMPfam:IPR012947 YP_002938939.1 CytoplasmicMembrane, score:9.99; COG0577 ABC-type antimicrobial peptide transport system, permease component; KEGG:0hypothetical protein; HMMPfam:IPR003838 YP_002938940.1 CytoplasmicMembrane, score:9.49; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:0hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938941.1 Cytoplasmic, score:8.87 YP_002938942.1 Involved in the tartrate degradation pathway YP_002938943.1 Involved in the tartrate degradation pathway YP_002938944.1 CytoplasmicMembrane, score:10.00; COG0471 Di- and tricarboxylate transporters; KEGG:K03893 citrate transporter; HMMPfam:IPR004680; HMMTigr:IPR001898 YP_002938945.1 Cytoplasmic, score:8.87; COG1802 Transcriptional regulators; KEGG:K05799 hypothetical protein; HMMPfam:IPR000524; HMMPfam:IPR011711; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002938946.1 Cytoplasmic, score:8.87; COG1802 Transcriptional regulators; KEGG:K03709 putative transcription regulator; HMMPfam:IPR000524; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002938947.1 Cytoplasmic, score:8.87; COG0642 Signal transduction histidine kinase; KEGG:0integral membrane sensor signal transduction histidine kinase HMMPfam:IPR003594; FPrintScan:IPR004358; Gene3D:IPR003594; HMMSmart:IPR003594; superfamily:IPR003594 YP_002938948.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938949.1 Cytoplasmic, score:8.87; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); KEGG:K03545 trigger factor; HMMPfam:IPR001179; HMMPfam:IPR008880 YP_002938950.1 Cytoplasmic, score:8.87 YP_002938951.1 Unknown cell location; NOG16557 non supervised orthologous group YP_002938952.1 CytoplasmicMembrane, score:9.26 YP_002938953.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K01990 probable ABC transporter; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002938954.1 Cytoplasmic, score:8.87; COG1725 Predicted transcriptional regulators; KEGG:K07979 transcriptional regulator, GntR family; HMMPfam:IPR000524; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002938955.1 CytoplasmicMembrane, score:9.99 YP_002938956.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K01990 ABC transporter, ATP-binding protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593 YP_002938957.1 CytoplasmicMembrane, score:9.97; COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); KEGG:K06213 putative divalent cation transport protein; HMMPfam:IPR000644; HMMPfam:IPR006667; HMMPfam:IPR006668; HMMTigr:IPR006669; superfamily:IPR011002 YP_002938958.1 Cytoplasmic, score:8.87 YP_002938959.1 Cytoplasmic, score:8.87 YP_002938960.1 Extracellular, score:8.82 YP_002938961.1 CytoplasmicMembrane, score:9.26; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; KEGG:0sulfatase HMMPfam:IPR000917; Gene3D:IPR001952; superfamily:IPR014756 YP_002938962.1 Cytoplasmic, score:8.87; COG0489 ATPases involved in chromosome partitioning; KEGG:K03605 mrp family protein YP_002938963.1 Cytoplasmic, score:8.87; NOG21680 non supervised orthologous group YP_002938964.1 Unknown cell location YP_002938965.1 CytoplasmicMembrane, score:10.00; COG1757 Na+/H+ antiporter; KEGG:K03315 malate-H+/Na+-lactate antiporter; HMMPfam:IPR004770; ScanRegExp:IPR006025 YP_002938966.1 CytoplasmicMembrane, score:10.00 YP_002938967.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K01990 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002938968.1 CytoplasmicMembrane, score:9.99 YP_002938969.1 Cytoplasmic, score:8.87; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; KEGG:K03088 hypothetical protein; HMMPfam:IPR007627; HMMPfam:IPR013249; HMMTigr:IPR014284; superfamily:IPR013324; superfamily:IPR013325 YP_002938970.1 Cytoplasmic, score:9.36; COG1876 D-alanyl-D-alanine carboxypeptidase; KEGG:K07260 D-alanyl-D-alanine carboxypeptidase HMMPfam:IPR003709 YP_002938971.1 Cytoplasmic, score:8.87; COG1373 Predicted ATPase (AAA+ superfamily); KEGG:0hypothetical protein YP_002938972.1 Cytoplasmic, score:8.87 YP_002938973.1 CytoplasmicMembrane, score:9.99; COG1266 Predicted metal-dependent membrane protease; HMMPfam:IPR003675 YP_002938974.1 Unknown cell location YP_002938975.1 CytoplasmicMembrane, score:9.99; COG2426 Predicted membrane protein; HMMPfam:IPR009577 YP_002938976.1 CytoplasmicMembrane, score:9.99; COG1266 Predicted metal-dependent membrane protease; HMMPfam:IPR003675 YP_002938977.1 Extracellular, score:8.82 YP_002938978.1 Unknown cell location YP_002938979.1 Unknown cell location YP_002938980.1 Unknown cell location YP_002938981.1 CytoplasmicMembrane, score:10.00; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; KEGG:K07706 AgrC HMMPfam:IPR003594; Gene3D:IPR003594; superfamily:IPR003594 YP_002938982.1 Cytoplasmic, score:8.87; COG3279 Response regulator of the LytR/AlgR family; KEGG:K07705 two-component response regulator; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002938983.1 CytoplasmicMembrane, score:7.63; COG0053 Predicted Co/Zn/Cd cation transporters; KEGG:0cation efflux system protein (zinc/cadmium/cobalt) HMMPfam:IPR002524; HMMPanther:IPR002524; HMMTigr:IPR002524 YP_002938984.1 CytoplasmicMembrane, score:9.49; COG0681 Signal peptidase I; KEGG:K03100 signal peptidase I HMMPfam:IPR011056; FPrintScan:IPR000223; Gene3D:IPR011056; HMMPanther:IPR000223; HMMPanther:IPR014037; HMMTigr:IPR000223; ScanRegExp:IPR000223; superfamily:IPR015927 YP_002938985.1 Cytoplasmic, score:8.87; COG0326 Molecular chaperone, HSP90 family; KEGG:K04079 heat shock protein 90; FPrintScan:IPR001404; Gene3D:IPR003594; HMMPanther:IPR001404; superfamily:IPR003594 YP_002938986.1 CytoplasmicMembrane, score:9.82; COG0489 ATPases involved in chromosome partitioning; KEGG:K08253 capsular exopolysaccharide family YP_002938987.1 Unknown cell location; COG3944 Capsular polysaccharide biosynthesis protein; KEGG:K08253 capsular exopolysaccharide family HMMPfam:IPR003856 YP_002938988.1 Cytoplasmic, score:8.87; COG4464 Capsular polysaccharide biosynthesis protein; KEGG:K01104 phosphotyrosine-protein phosphatase, putative HMMPfam:IPR004013 YP_002938989.1 Unknown cell location YP_002938990.1 Extracellular, score:8.82 YP_002938991.1 Cytoplasmic, score:8.87; COG0054 Riboflavin synthase beta-chain; KEGG:K00794 riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase); HMMPfam:IPR002180; BlastProDom:IPR002180; Gene3D:IPR002180; HMMPanther:IPR002180; HMMTigr:IPR002180; superfamily:IPR002180 YP_002938992.1 Cytoplasmic, score:8.87; COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG:K01497 K02858 riboflavin biosynthesis; GTP-cyclohydrolase II HMMPfam:IPR000422; HMMPfam:IPR000926; BlastProDom:IPR000422; HMMTigr:IPR000422; HMMTigr:IPR000926 YP_002938993.1 Cytoplasmic, score:8.87; COG0307 Riboflavin synthase alpha chain; KEGG:K00793 riboflavin synthase, alpha subunit HMMPfam:IPR001783; BlastProDom:IPR001783; HMMPIR:IPR001783; HMMPanther:IPR001783; HMMTigr:IPR001783 YP_002938994.1 Cytoplasmic, score:8.87; COG0117 Pyrimidine deaminase; KEGG:K00082 K01498 riboflavin biosynthesis protein HMMPfam:IPR002125; HMMPfam:IPR002734; HMMPanther:IPR004794; HMMTigr:IPR004794; HMMTigr:IPR011549; ScanRegExp:IPR002125 YP_002938995.1 Unknown cell location YP_002938996.1 Unknown cell location YP_002938997.1 Cytoplasmic, score:8.87; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; KEGG:K03088 hypothetical protein; HMMPfam:IPR007627; HMMPfam:IPR007630; HMMTigr:IPR014284; superfamily:IPR013324; superfamily:IPR013325 YP_002938998.1 CytoplasmicMembrane, score:9.99; COG5660 Predicted integral membrane protein YP_002938999.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer YP_002939000.1 Unknown cell location; COG1846 Transcriptional regulators; KEGG:K03712 transcriptional regulator, MarR family; HMMPfam:IPR000835; Gene3D:IPR011991; HMMSmart:IPR000835 YP_002939001.1 Unknown cell location; COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; KEGG:K00648 3-oxoacyl-[acyl-carrier-protein] synthase III HMMPfam:IPR013747; HMMPfam:IPR013751; HMMTigr:IPR004655 YP_002939002.1 Cytoplasmic, score:8.87; COG0825 Acetyl-CoA carboxylase alpha subunit; KEGG:K01962 K01963 acetyl-coA carboxylase carboxyl transferase subunit beta/alpha HMMPfam:IPR001095; FPrintScan:IPR000438; FPrintScan:IPR001095; HMMPanther:IPR001095; HMMTigr:IPR000438; HMMTigr:IPR001095 YP_002939003.1 Cytoplasmic, score:8.87; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; KEGG:K02372 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ HMMPfam:IPR013114; HMMTigr:IPR010084 YP_002939004.1 Cytoplasmic, score:8.87 YP_002939005.1 Cytoplasmic, score:9.98; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; KEGG:K00646 FabF HMMPfam:IPR014030; HMMPfam:IPR014031; HMMPanther:IPR000794 YP_002939006.1 Unknown cell location; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); KEGG:K00059 3-oxoacyl-[acyl-carrier-protein] reductase HMMPfam:IPR002198; FPrintScan:IPR002198; FPrintScan:IPR002347; HMMPanther:IPR002198; HMMTigr:IPR011284; ScanRegExp:IPR002198 YP_002939007.1 Cytoplasmic, score:8.87; COG0331 (acyl-carrier-protein) S-malonyltransferase; KEGG:K00645 malonyl CoA-acyl carrier protein transacylase HMMPfam:IPR014043; Gene3D:IPR001227; HMMTigr:IPR004410 YP_002939008.1 Cytoplasmic, score:8.87; COG2070 Dioxygenases related to 2-nitropropane dioxygenase; KEGG:K02371 dioxygenase related to 2-nitropropane dioxygenase; HMMPfam:IPR004136; Gene3D:IPR013785 YP_002939009.1 Cytoplasmic, score:8.87; COG0236 Acyl carrier protein; KEGG:K02078 acyl carrier protein; HMMPfam:IPR006163; BlastProDom:IPR003231; Gene3D:IPR009081; HMMTigr:IPR003231; superfamily:IPR009081 YP_002939010.1 Cytoplasmic, score:8.87; COG1373 Predicted ATPase (AAA+ superfamily); KEGG:0narrowly conserved hypothetical protein YP_002939011.1 Unknown cell location YP_002939012.1 Extracellular, score:9.55; COG0744 Membrane carboxypeptidase (penicillin-binding protein); KEGG:K03693 penicillin-binding protein, 1A family; HMMPfam:IPR001264; HMMPfam:IPR001460; BlastProDom:IPR001264; HMMTigr:IPR011816; superfamily:IPR012338 YP_002939013.1 Cytoplasmic, score:8.87; COG2002 Regulators of stationary/sporulation gene expression; KEGG:K04769 stage V sprulation protein T YP_002939014.1 Cytoplasmic, score:8.87; COG2068 Uncharacterized MobA-related protein; KEGG:0hypothetical protein YP_002939015.1 CytoplasmicMembrane, score:9.49; COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; KEGG:K00087 xanthine dehydrogenase HMMPfam:IPR000674; HMMPfam:IPR008274; Gene3D:IPR000674; superfamily:IPR000674 YP_002939016.1 Cytoplasmic, score:8.87; COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; KEGG:K03518 [2Fe-2S] binding domain protein HMMPfam:IPR001041; HMMPfam:IPR002888; BlastProDom:IPR002888; Gene3D:IPR012675; ScanRegExp:IPR006058; superfamily:IPR001041; superfamily:IPR002888 YP_002939017.1 Cytoplasmic, score:8.87; COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; KEGG:K00087 putative FAD-binding subunit of xanthine dehydrogenase dehydrogenase HMMPfam:IPR002346; superfamily:IPR005107 YP_002939018.1 Cytoplasmic, score:8.87 YP_002939019.1 Cytoplasmic, score:8.87; NOG13230 non supervised orthologous group; HMMPfam:IPR001455; Gene3D:IPR001455 YP_002939020.1 Cytoplasmic, score:8.87; COG0709 Selenophosphate synthase; KEGG:K01008 selenide, water dikinase HMMPfam:IPR000728; HMMPfam:IPR010918; HMMPIR:IPR004536; HMMTigr:IPR004536 YP_002939021.1 Cytoplasmic, score:8.87; COG0520 Selenocysteine lyase; KEGG:K04487 cysteine desulfurase family protein HMMPfam:IPR000192; Gene3D:IPR015421; HMMTigr:IPR010969; ScanRegExp:IPR000192; superfamily:IPR015424 YP_002939022.1 CytoplasmicMembrane, score:9.49; COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; KEGG:K02018 ABC-type molybdate transport system permease/ATP-binding protein HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002939023.1 CytoplasmicMembrane, score:10.00; COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; KEGG:K02018 putative molybdate transport system permease/ATP-binding protein HMMPfam:IPR000515; HMMTigr:IPR011867 YP_002939024.1 Unknown cell location; COG0725 ABC-type molybdate transport system, periplasmic component; KEGG:K02020 molybdenum ABC transporter, periplasmic molybdate-binding protein; HMMPfam:IPR006059; BlastProDom:IPR011587; HMMTigr:IPR005950 YP_002939025.1 Cytoplasmic, score:8.87; COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; KEGG:K07402 hypothetical protein; HMMPfam:IPR003777; HMMPfam:IPR005302; Gene3D:IPR015808; superfamily:IPR011037 YP_002939026.1 Cytoplasmic, score:8.87; COG2896 Molybdenum cofactor biosynthesis enzyme; KEGG:K03639 molybdenum cofactor biosynthesis protein A; HMMPfam:IPR007197; HMMPfam:IPR010505; Gene3D:IPR013785; HMMSmart:IPR006638; ScanRegExp:IPR000385 YP_002939027.1 Unknown cell location; COG0303 Molybdopterin biosynthesis enzyme; KEGG:0hypothetical protein; HMMPfam:IPR001453; BlastProDom:IPR001453; Gene3D:IPR001453; superfamily:IPR001453 YP_002939028.1 Cytoplasmic, score:8.87; COG0521 Molybdopterin biosynthesis enzymes; KEGG:K03750 MGC83148 protein; HMMPfam:IPR001453; Gene3D:IPR001453; HMMTigr:IPR001453; ScanRegExp:IPR008284; superfamily:IPR001453 YP_002939029.1 Cytoplasmic, score:8.87; COG0315 Molybdenum cofactor biosynthesis enzyme; KEGG:K03637 molybdenum cofactor biosynthesis protein C; HMMPfam:IPR002820; BlastProDom:IPR002820; Gene3D:IPR002820; HMMTigr:IPR002820; superfamily:IPR002820 YP_002939030.1 Cytoplasmic, score:8.87; COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; KEGG:K07402 biotin/lipoyl attachment; superfamily:IPR002376 YP_002939031.1 Cytoplasmic, score:8.87; NOG13189 non supervised orthologous group YP_002939032.1 CytoplasmicMembrane, score:10.00; COG2233 Xanthine/uracil permeases; KEGG:K03458 uracil-xanthine permease; HMMPfam:IPR006043; HMMPanther:IPR006042; HMMPanther:IPR006043; HMMTigr:IPR006042; ScanRegExp:IPR006042 YP_002939033.1 Cytoplasmic, score:8.87; COG0406 Fructose-2,6-bisphosphatase; KEGG:K01834 phosphoglycerate mutase HMMPfam:IPR013078 YP_002939034.1 CytoplasmicMembrane, score:10.00; COG1115 Na+/alanine symporter; KEGG:K03310 sodium/alanine symporter; HMMPfam:IPR001463; FPrintScan:IPR001463; HMMTigr:IPR001463; superfamily:IPR014756 YP_002939035.1 Unknown cell location YP_002939036.1 Unknown cell location YP_002939037.1 Cytoplasmic, score:8.87; COG0469 Pyruvate kinase; KEGG:K00873 pyruvate kinase HMMPfam:IPR015793; HMMPfam:IPR015794; BlastProDom:IPR015793; FPrintScan:IPR015793; Gene3D:IPR015794; Gene3D:IPR015813; HMMPanther:IPR001697; HMMTigr:IPR001697; ScanRegExp:IPR001547; ScanRegExp:IPR015793; superfamily:IPR011037; superfamily:IPR015795 YP_002939038.1 Cytoplasmic, score:8.87; COG3894 Uncharacterized metal-binding protein; HMMPfam:IPR001041; superfamily:IPR001041 YP_002939039.1 Cytoplasmic, score:8.87; COG0426 Uncharacterized flavoproteins; KEGG:0F420H2 oxidase HMMPfam:IPR001279 YP_002939040.1 Unknown cell location YP_002939041.1 CytoplasmicMembrane, score:9.99 YP_002939042.1 Unknown cell location YP_002939043.1 Unknown cell location; NOG27047 non supervised orthologous group YP_002939044.1 Extracellular, score:8.82; NOG27445 non supervised orthologous group; HMMPfam:IPR001818 YP_002939045.1 Cytoplasmic, score:8.87 YP_002939046.1 Cytoplasmic, score:8.87; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; KEGG:K03088 putative RNA polymerase sigma factor (ECF subfamily); HMMPfam:IPR013249; HMMTigr:IPR014284; superfamily:IPR013324; superfamily:IPR013325 YP_002939047.1 Unknown cell location; COG4823 Abortive infection bacteriophage resistance protein YP_002939048.1 Unknown cell location YP_002939049.1 Cytoplasmic, score:8.87; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; KEGG:K00676 ribosomal-protein-alanine acetyltransferase HMMPfam:IPR000182 YP_002939050.1 Cytoplasmic, score:8.87; COG5464 Uncharacterized conserved protein YP_002939051.1 Unknown cell location; HMMPfam:IPR000182 YP_002939052.1 Cytoplasmic, score:8.87; NOG14059 non supervised orthologous group; HMMTigr:IPR006675 YP_002939053.1 Cytoplasmic, score:8.87; NOG21973 non supervised orthologous group; superfamily:IPR009097 YP_002939054.1 Cytoplasmic, score:8.87 YP_002939055.1 Cytoplasmic, score:8.87 YP_002939056.1 CytoplasmicMembrane, score:9.99 YP_002939057.1 CytoplasmicMembrane, score:10.00; COG1115 Na+/alanine symporter; KEGG:K03310 putative sodium/alanine symporter; HMMPfam:IPR001463; FPrintScan:IPR001463; HMMTigr:IPR001463; ScanRegExp:IPR001463 YP_002939058.1 Cytoplasmic, score:8.87 YP_002939059.1 Cytoplasmic, score:8.87; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; KEGG:0hydrolase of MutT (Nudix) family HMMPfam:IPR000086; BlastProDom:IPR002667; Gene3D:IPR000086; superfamily:IPR015797 YP_002939060.1 Cytoplasmic, score:9.98; COG0073 EMAP domain; KEGG:K01874 K06878 methionyl-tRNA synthetase HMMPfam:IPR002547; HMMPfam:IPR015413; FPrintScan:IPR014758; Gene3D:IPR012340; Gene3D:IPR014729; HMMTigr:IPR002304; HMMTigr:IPR004495; superfamily:IPR009080 YP_002939061.1 Unknown cell location YP_002939062.1 Cytoplasmic, score:8.87 YP_002939063.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 ABC transporter, ATP-binding protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002939064.1 CytoplasmicMembrane, score:9.99 YP_002939065.1 CytoplasmicMembrane, score:9.99 YP_002939066.1 Unknown cell location YP_002939067.1 Unknown cell location YP_002939068.1 Unknown cell location YP_002939069.1 Unknown cell location YP_002939070.1 CytoplasmicMembrane, score:9.99; NOG34966 non supervised orthologous group YP_002939071.1 Unknown cell location; COG3279 Response regulator of the LytR/AlgR family; KEGG:K07705 two-component response regulator; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002939072.1 CytoplasmicMembrane, score:7.63; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; HMMPfam:IPR003594; Gene3D:IPR003594; superfamily:IPR003594 YP_002939073.1 Unknown cell location; NOG09580 non supervised orthologous group; KEGG:K09163 hypothetical protein; HMMPfam:IPR006674; HMMSmart:IPR003607; HMMTigr:IPR006675 YP_002939074.1 CytoplasmicMembrane, score:9.99; COG0530 Ca2+/Na+ antiporter; KEGG:0hypothetical protein; HMMPfam:IPR004837; HMMPanther:IPR004481; HMMTigr:IPR004481 YP_002939075.1 CytoplasmicMembrane, score:9.99; COG1971 Predicted membrane protein; HMMPfam:IPR003810 YP_002939076.1 Unknown cell location; COG1695 Predicted transcriptional regulators; HMMPfam:IPR005149; Gene3D:IPR011991 YP_002939077.1 CytoplasmicMembrane, score:9.99; NOG21966 non supervised orthologous group YP_002939078.1 Cytoplasmic, score:8.87; COG3595 Uncharacterized conserved protein YP_002939079.1 Cytoplasmic, score:8.87; COG4641 Uncharacterized protein conserved in bacteria YP_002939080.1 Unknown cell location; COG2604 Uncharacterized protein conserved in bacteria; HMMPfam:IPR002826; BlastProDom:IPR002826 YP_002939081.1 Unknown cell location; COG4641 Uncharacterized protein conserved in bacteria YP_002939082.1 Cytoplasmic, score:8.87; COG4584 Transposase and inactivated derivatives; HMMPfam:IPR001584 YP_002939083.1 Cytoplasmic, score:8.87; COG1484 DNA replication protein; KEGG:K02315 possible transposase; HMMPfam:IPR002611; HMMPfam:IPR013690 YP_002939084.1 Cytoplasmic, score:8.87; COG4641 Uncharacterized protein conserved in bacteria; KEGG:K06320 hypothetical protein YP_002939085.1 Cytoplasmic, score:8.87; COG0455 ATPases involved in chromosome partitioning YP_002939086.1 Cytoplasmic, score:8.87; COG0455 ATPases involved in chromosome partitioning YP_002939087.1 Cytoplasmic, score:8.87 YP_002939088.1 Unknown cell location YP_002939089.1 Unknown cell location; COG4260 Putative virion core protein (lumpy skin disease virus) YP_002939090.1 Cytoplasmic, score:8.87 YP_002939091.1 Unknown cell location YP_002939092.1 Cytoplasmic, score:8.87; COG3436 Transposase and inactivated derivatives; KEGG:K07484 transposase YP_002939093.1 Unknown cell location YP_002939094.1 Unknown cell location; COG3436 Transposase and inactivated derivatives; KEGG:K07484 IS66 family element, Orf2; HMMPfam:IPR008878 YP_002939095.1 Cytoplasmic, score:8.87; COG3335 Transposase and inactivated derivatives; KEGG:K07494 predicted inactivated transposase; superfamily:IPR009057; superfamily:IPR012337 YP_002939096.1 Cytoplasmic, score:8.87 YP_002939097.1 Cytoplasmic, score:8.87; COG3436 Transposase and inactivated derivatives; KEGG:K07484 transposase; HMMPfam:IPR008878 YP_002939098.1 Cytoplasmic, score:8.87; COG3436 Transposase and inactivated derivatives; KEGG:K07484 hypothetical protein YP_002939099.1 Cytoplasmic, score:8.87; COG3436 Transposase and inactivated derivatives; KEGG:K07484 hypothetical protein; HMMPfam:IPR004291 YP_002939100.1 Cytoplasmic, score:8.87; COG2604 Uncharacterized protein conserved in bacteria; HMMPfam:IPR002826; BlastProDom:IPR002826 YP_002939101.1 Cytoplasmic, score:8.87; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; KEGG:0glutamine--scyllo-inositol transaminase HMMPfam:IPR000653; Gene3D:IPR015421; Gene3D:IPR015422; HMMPIR:IPR000653; superfamily:IPR015424 YP_002939102.1 Unknown cell location YP_002939103.1 Unknown cell location YP_002939104.1 Cytoplasmic, score:8.87 YP_002939105.1 Unknown cell location; COG0439 Biotin carboxylase; KEGG:K01954 putative carbamoyl-phosphate synthase large chain HMMPfam:IPR003806; Gene3D:IPR013817 YP_002939106.1 Unknown cell location; COG0451 Nucleoside-diphosphate-sugar epimerases; KEGG:K01784 UDP-glucose 4-epimerase HMMPfam:IPR001509 YP_002939107.1 Cytoplasmic, score:8.87; COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_002939108.1 Cytoplasmic, score:8.87; COG2089 Sialic acid synthase; KEGG:0sialic acid synthase HMMPfam:IPR013132; HMMPfam:IPR013974; Gene3D:IPR013785 YP_002939109.1 Cytoplasmic, score:9.98; COG1083 CMP-N-acetylneuraminic acid synthetase; KEGG:K00983 CMP-N-acetylneuraminic acid synthetase HMMPfam:IPR003329 YP_002939110.1 Cytoplasmic, score:8.87; COG1086 Predicted nucleoside-diphosphate sugar epimerases; KEGG:K00100 K01726 UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase HMMPfam:IPR003869; HMMPanther:IPR003869 YP_002939111.1 Cytoplasmic, score:8.87; COG2604 Uncharacterized protein conserved in bacteria; HMMPfam:IPR002826; BlastProDom:IPR002826 YP_002939112.1 Cytoplasmic, score:8.87 YP_002939113.1 Extracellular, score:9.55; COG1344 Flagellin and related hook-associated proteins; KEGG:K02406 flagellin and related hook-associated proteins; HMMPfam:IPR001029; HMMPfam:IPR001492; BlastProDom:IPR001029 YP_002939114.1 Extracellular, score:8.82 YP_002939115.1 Cytoplasmic, score:8.87; superfamily:IPR009053 YP_002939116.1 Cytoplasmic, score:8.87; COG1516 Flagellin-specific chaperone FliS; KEGG:K02422 flagellar protein; HMMPfam:IPR003713; HMMTigr:IPR003713; ScanRegExp:IPR002198 YP_002939117.1 Unknown cell location; COG1345 Flagellar capping protein; KEGG:K02407 flagellar capping protein; HMMPfam:IPR003481; HMMPfam:IPR010809 YP_002939118.1 Cytoplasmic, score:8.87; COG1334 Uncharacterized flagellar protein FlaG; KEGG:K06603 uncharacterized flagellar protein FlaG; HMMPfam:IPR005186 YP_002939119.1 Cytoplasmic, score:8.87; COG0305 Replicative DNA helicase; KEGG:K02314 replicative DNA helicase HMMPfam:IPR007693; HMMPfam:IPR007694; BlastProDom:IPR007694; Gene3D:IPR007693; HMMTigr:IPR007692 YP_002939120.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002939121.1 Cytoplasmic, score:8.87; COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain; KEGG:0DHH subfamily phosphodiesterase HMMPfam:IPR001667; HMMPfam:IPR003156; HMMPIR:IPR014528 YP_002939122.1 Unknown cell location; COG0330 Membrane protease subunits, stomatin/prohibitin homologs; KEGG:0membrane protease subunits, stomatin/prohibitin homologs HMMPfam:IPR001107; HMMSmart:IPR001107; ScanRegExp:IPR001972 YP_002939123.1 CytoplasmicMembrane, score:9.26; COG1585 Membrane protein implicated in regulation of membrane protease activity; HMMPfam:IPR002810 YP_002939124.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002939125.1 Unknown cell location; COG0629 Single-stranded DNA-binding protein; KEGG:K03111 single-strand binding protein; HMMPfam:IPR000424; Gene3D:IPR012340; HMMPanther:IPR011344; HMMTigr:IPR011344 YP_002939126.1 Cytoplasmic, score:8.87; COG0360 Ribosomal protein S6; KEGG:K02990 30S ribosomal protein S6; HMMPfam:IPR000529; BlastProDom:IPR000529; Gene3D:IPR014717; HMMTigr:IPR000529; superfamily:IPR000529 YP_002939127.1 Cytoplasmic, score:8.87 YP_002939128.1 Unknown cell location; COG4481 Uncharacterized protein conserved in bacteria; HMMPfam:IPR009296 YP_002939129.1 Cytoplasmic, score:8.87; COG0846 NAD-dependent protein deacetylases, SIR2 family; KEGG:0NAD-dependent deacetylase HMMPfam:IPR003000; HMMPanther:IPR003000 YP_002939130.1 Cytoplasmic, score:8.87; COG0569 K+ transport systems, NAD-binding component; KEGG:K03499 hypothetical protein; HMMPfam:IPR003148; HMMPfam:IPR006037 YP_002939131.1 CytoplasmicMembrane, score:10.00; COG0168 Trk-type K+ transport systems, membrane components; KEGG:K03498 hypothetical protein; HMMPfam:IPR003445; HMMTigr:IPR004772 YP_002939132.1 Cytoplasmic, score:8.87; COG0313 Predicted methyltransferases; KEGG:0tetrapyrrole (corrin/porphyrin) methylase; HMMPfam:IPR000878; BlastProDom:IPR008190; Gene3D:IPR014777; HMMTigr:IPR008189; superfamily:IPR000878 YP_002939133.1 Cytoplasmic, score:8.87; COG4123 Predicted O-methyltransferase; KEGG:0methyltransferase HMMPfam:IPR007848 YP_002939134.1 Cytoplasmic, score:8.87; COG1774 Uncharacterized homolog of PSP1; HMMPfam:IPR007557 YP_002939135.1 Cytoplasmic, score:8.87; COG2812 DNA polymerase III, gamma/tau subunits; KEGG:K00961 DNA polymerase III, delta prime subunit YP_002939136.1 Cytoplasmic, score:8.87; COG1728 Uncharacterized protein conserved in bacteria; KEGG:K09770 hypothetical protein; HMMPfam:IPR005585; BlastProDom:IPR005585 YP_002939137.1 Cytoplasmic, score:8.87; COG0194 Guanylate kinase; KEGG:K00942 guanylate kinase HMMSmart:IPR008145 YP_002939138.1 Cytoplasmic, score:8.87; COG1982 Arginine/lysine/ornithine decarboxylases; KEGG:K01582 arginine/lysine/ornithine decarboxylase HMMPfam:IPR000310; HMMPfam:IPR008286; Gene3D:IPR008286; Gene3D:IPR015421; HMMPanther:IPR000277; superfamily:IPR015424 YP_002939139.1 Unknown cell location YP_002939140.1 Cytoplasmic, score:8.87; NOG18294 non supervised orthologous group YP_002939141.1 Cytoplasmic, score:8.87; COG4667 Predicted esterase of the alpha-beta hydrolase superfamily; KEGG:0serine protease HMMPfam:IPR002641 YP_002939142.1 Unknown cell location; COG1686 D-alanyl-D-alanine carboxypeptidase; KEGG:K01286 serine-type D-Ala-D-Ala carboxypeptidase HMMPfam:IPR001967; superfamily:IPR012338 YP_002939143.1 Cytoplasmic, score:8.87; COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; KEGG:K03439 tRNA (guanine-N(7)-)-methyltransferase HMMPfam:IPR003358; HMMPanther:IPR003358; HMMTigr:IPR004395 YP_002939144.1 Cytoplasmic, score:8.87; Gene3D:IPR011990 YP_002939145.1 Cytoplasmic, score:9.98; COG2195 Di- and tripeptidases; KEGG:K01258 peptidase T HMMPfam:IPR002933; HMMPfam:IPR011650; HMMTigr:IPR010161; ScanRegExp:IPR001261 YP_002939146.1 Extracellular, score:8.82 YP_002939147.1 Cytoplasmic, score:8.87; COG0513 Superfamily II DNA and RNA helicases; KEGG:K05592 DEAD/DEAH box helicase-like; HMMPfam:IPR001650; HMMPfam:IPR005580; HMMPfam:IPR011545; HMMSmart:IPR001650; HMMSmart:IPR014001; ScanRegExp:IPR000629 YP_002939148.1 Cellwall, score:9.17; NOG12740 non supervised orthologous group YP_002939149.1 CytoplasmicMembrane, score:9.99; COG1268 Uncharacterized conserved protein; KEGG:K03523 bioY protein; HMMPfam:IPR003784 YP_002939150.1 Cytoplasmic, score:8.87; COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; KEGG:K06287 Maf-like protein; HMMPfam:IPR003697; HMMTigr:IPR003697 YP_002939151.1 CytoplasmicMembrane, score:9.99; COG1289 Predicted membrane protein YP_002939152.1 CytoplasmicMembrane, score:9.49; COG0642 Signal transduction histidine kinase; KEGG:0sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003660; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002939153.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002939154.1 Cytoplasmic, score:8.87; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; KEGG:0possible phospholipase D HMMPfam:IPR001736; HMMSmart:IPR001736 YP_002939155.1 Cytoplasmic, score:9.98; COG0366 Glycosidases; KEGG:K01234 alpha-amylase HMMPfam:IPR004185; HMMPfam:IPR006047; Gene3D:IPR013781; Gene3D:IPR013783; HMMSmart:IPR006589; superfamily:IPR014756 YP_002939156.1 CytoplasmicMembrane, score:7.63; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; KEGG:K02547 methicillin-resistance MecR1 regulatory protein; HMMPfam:IPR008756; ScanRegExp:IPR001005 YP_002939157.1 Unknown cell location; COG3682 Predicted transcriptional regulator; HMMPfam:IPR005650; BlastProDom:IPR005650; Gene3D:IPR011991 YP_002939158.1 Unknown cell location YP_002939159.1 Unknown cell location; COG1388 FOG: LysM repeat; KEGG:K07273 glycoside hydrolase family 25; HMMPfam:IPR002053; HMMPfam:IPR013247; BlastProDom:IPR002053; Gene3D:IPR013781; HMMSmart:IPR003646 YP_002939160.1 CytoplasmicMembrane, score:9.75 YP_002939161.1 Cellwall, score:9.17; COG2268 Uncharacterized protein conserved in bacteria; KEGG:K07192 flotillin 2; HMMPfam:IPR001107; HMMPfam:IPR004851; HMMSmart:IPR001107 YP_002939162.1 Cytoplasmic, score:8.87 YP_002939163.1 Unknown cell location YP_002939164.1 Cytoplasmic, score:8.87 YP_002939165.1 Cytoplasmic, score:8.87; NOG30897 non supervised orthologous group YP_002939166.1 Unknown cell location YP_002939167.1 Unknown cell location YP_002939168.1 Cytoplasmic, score:8.87 YP_002939169.1 Unknown cell location; COG5444 Uncharacterized conserved protein YP_002939170.1 Cytoplasmic, score:8.87 YP_002939171.1 Cytoplasmic, score:8.87 YP_002939172.1 Cytoplasmic, score:8.87 YP_002939173.1 Unknown cell location YP_002939174.1 Cytoplasmic, score:8.87; COG3547 Transposase and inactivated derivatives; KEGG:K07486 transposase; HMMPfam:IPR002525; HMMPfam:IPR003346 YP_002939175.1 Cytoplasmic, score:8.87 YP_002939176.1 Unknown cell location YP_002939177.1 Unknown cell location YP_002939178.1 Unknown cell location; COG5585 NAD+--asparagine ADP-ribosyltransferase YP_002939179.1 Cytoplasmic, score:8.87 YP_002939180.1 Unknown cell location YP_002939181.1 Cytoplasmic, score:8.87; COG3547 Transposase and inactivated derivatives; KEGG:K07486 transposase; HMMPfam:IPR002525; HMMPfam:IPR003346 YP_002939182.1 Extracellular, score:8.82 YP_002939183.1 Extracellular, score:8.82 YP_002939184.1 Extracellular, score:8.82 YP_002939185.1 Unknown cell location YP_002939186.1 Cytoplasmic, score:8.87; NOG28548 non supervised orthologous group; Gene3D:IPR002110; superfamily:IPR002110 YP_002939187.1 Cytoplasmic, score:8.87; COG5444 Uncharacterized conserved protein YP_002939188.1 Unknown cell location; COG5444 Uncharacterized conserved protein; superfamily:IPR011050 YP_002939189.1 Unknown cell location YP_002939190.1 Unknown cell location YP_002939191.1 Cytoplasmic, score:8.87; COG5585 NAD+--asparagine ADP-ribosyltransferase YP_002939192.1 Cytoplasmic, score:8.87 YP_002939193.1 Unknown cell location YP_002939194.1 Cytoplasmic, score:8.87; COG4495 Uncharacterized protein conserved in bacteria YP_002939195.1 Unknown cell location YP_002939196.1 Cytoplasmic, score:8.87 YP_002939197.1 CytoplasmicMembrane, score:9.99 YP_002939198.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522 YP_002939199.1 catalyzes the reduction of hydroxylamine to ammonia and water YP_002939200.1 Cytoplasmic, score:8.87; COG0388 Predicted amidohydrolase; KEGG:K01431 carbon-nitrogen hydrolase family protein HMMPfam:IPR003010; Gene3D:IPR003010; superfamily:IPR003010 YP_002939201.1 Cytoplasmic, score:8.87; COG2957 Peptidylarginine deiminase and related enzymes; KEGG:K10536 hypothetical protein HMMPfam:IPR007466 YP_002939202.1 Cytoplasmic, score:8.87; COG0019 Diaminopimelate decarboxylase; KEGG:0carboxynorspermidine decarboxylase HMMPfam:IPR000183; HMMTigr:IPR005730; superfamily:IPR009006 YP_002939203.1 Cytoplasmic, score:8.87; COG1748 Saccharopine dehydrogenase and related proteins; KEGG:K00290 hypothetical protein HMMPfam:IPR005097 YP_002939204.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_002939205.1 Cytoplasmic, score:8.87; COG1982 Arginine/lysine/ornithine decarboxylases; KEGG:K01582 lysine decarboxylase HMMPfam:IPR000310; HMMPfam:IPR008286; Gene3D:IPR008286; Gene3D:IPR015421; ScanRegExp:IPR000310; superfamily:IPR015424 YP_002939206.1 Cytoplasmic, score:8.87; COG2405 Predicted nucleic acid-binding protein, contains PIN domain; KEGG:0hypothetical protein YP_002939207.1 Cytoplasmic, score:8.87 YP_002939208.1 Unknown cell location YP_002939210.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528 YP_002939211.1 Unknown cell location; COG0071 Molecular chaperone (small heat shock protein); HMMPfam:IPR002068; superfamily:IPR008978 YP_002939212.1 Cytoplasmic, score:8.87; COG1307 Uncharacterized protein conserved in bacteria; KEGG:0DegV protein; HMMPfam:IPR003797; HMMTigr:IPR003797 YP_002939213.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522 YP_002939214.1 Cytoplasmic, score:8.87 YP_002939215.1 Unknown cell location YP_002939216.1 CytoplasmicMembrane, score:7.80; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002939217.1 Unknown cell location YP_002939218.1 Unknown cell location; COG0071 Molecular chaperone (small heat shock protein); HMMPfam:IPR002068; superfamily:IPR008978 YP_002939219.1 Unknown cell location YP_002939220.1 Unknown cell location; COG1307 Uncharacterized protein conserved in bacteria; KEGG:0DegV protein; HMMPfam:IPR003797 YP_002939221.1 Cytoplasmic, score:8.87 YP_002939222.1 Cytoplasmic, score:8.87; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; KEGG:K03827 putative acetyltransferase HMMPfam:IPR000182 YP_002939223.1 Cytoplasmic, score:8.87; COG3910 Predicted ATPase; HMMSmart:IPR003593 YP_002939224.1 Cytoplasmic, score:8.87; COG4804 Uncharacterized conserved protein; HMMPfam:IPR009362 YP_002939225.1 Unknown cell location YP_002939226.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K04763 putative phage integrase/recombinase; HMMPfam:IPR002104; HMMPfam:IPR004107; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002939227.1 Cytoplasmic, score:8.87; NOG06536 non supervised orthologous group; HMMPfam:IPR007069 YP_002939228.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K03733 integrase; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002939229.1 Unknown cell location; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002939230.1 Unknown cell location; HMMTigr:IPR010093; superfamily:IPR009061 YP_002939232.1 Unknown cell location YP_002939233.1 Cytoplasmic, score:8.87 YP_002939234.1 CytoplasmicMembrane, score:9.99; COG5658 Predicted integral membrane protein YP_002939235.1 Unknown cell location; COG0640 Predicted transcriptional regulators; HMMPfam:IPR001845; Gene3D:IPR011991; HMMSmart:IPR001845 YP_002939236.1 Unknown cell location YP_002939237.1 Cytoplasmic, score:8.87 YP_002939238.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K04763 putative phage integrase/recombinase; HMMPfam:IPR002104; HMMPfam:IPR004107; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002939239.1 Unknown cell location; NOG06536 non supervised orthologous group; HMMPfam:IPR007069 YP_002939240.1 Cytoplasmic, score:8.87; COG1489 DNA-binding protein, stimulates sugar fermentation; KEGG:K06206 sugar fermentation stimulation protein A; HMMPfam:IPR005224; BlastProDom:IPR005224 YP_002939241.1 Cytoplasmic, score:8.87; COG1489 DNA-binding protein, stimulates sugar fermentation; KEGG:K06206 sugar fermentation stimulation protein A; HMMPfam:IPR005224; BlastProDom:IPR005224 YP_002939242.1 Cytoplasmic, score:8.87; HMMPfam:IPR000182 YP_002939243.1 Cytoplasmic, score:9.65; COG0110 Acetyltransferase (isoleucine patch superfamily); KEGG:K00633 galactoside O-acetyltransferase ScanRegExp:IPR001451; superfamily:IPR011004 YP_002939244.1 CytoplasmicMembrane, score:9.99; COG1272 Predicted membrane protein, hemolysin III homolog; KEGG:0predicted membrane protein, hemolysin IIIrelated protein; HMMPfam:IPR004254; HMMPanther:IPR004254; HMMPanther:IPR005744 YP_002939245.1 CytoplasmicMembrane, score:9.99; COG0471 Di- and tricarboxylate transporters; HMMPfam:IPR004680 YP_002939246.1 Unknown cell location; COG3345 Alpha-galactosidase; KEGG:K07407 alpha-galactosidase, putative HMMPfam:IPR000111 YP_002939247.1 Cytoplasmic, score:8.87; COG3345 Alpha-galactosidase; KEGG:K07407 alpha-galactosidase HMMPfam:IPR000111; Gene3D:IPR013785; HMMPIR:IPR002252; ScanRegExp:IPR000111 YP_002939248.1 Cytoplasmic, score:8.87; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen; HMMPfam:IPR007421 YP_002939249.1 Unknown cell location; NOG16821 non supervised orthologous group YP_002939250.1 Unknown cell location; HMMTigr:IPR006442 YP_002939251.1 Unknown cell location YP_002939252.1 CytoplasmicMembrane, score:9.99; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 methyl-accepting chemotaxis protein; HMMPfam:IPR004089; HMMSmart:IPR004089 YP_002939253.1 Unknown cell location YP_002939254.1 Unknown cell location; COG0071 Molecular chaperone (small heat shock protein); HMMPfam:IPR002068; superfamily:IPR008978 YP_002939255.1 Extracellular, score:8.82 YP_002939256.1 Extracellular, score:9.55; COG1344 Flagellin and related hook-associated proteins; KEGG:K02406 hypothetical protein; HMMPfam:IPR001029; HMMPfam:IPR001492; BlastProDom:IPR001029 YP_002939257.1 Extracellular, score:8.82 YP_002939258.1 Cytoplasmic, score:8.87; BlastProDom:IPR003751 YP_002939259.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 putative reverse transcriptasematurase of intron HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002939260.1 Extracellular, score:8.82 YP_002939261.1 Unknown cell location; COG0582 Integrase; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR011010 YP_002939262.1 Extracellular, score:8.82 YP_002939263.1 Cytoplasmic, score:8.87; COG4804 Uncharacterized conserved protein; HMMPfam:IPR009362 YP_002939264.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group YP_002939265.1 Cytoplasmic, score:8.87; COG1011 Predicted hydrolase (HAD superfamily); KEGG:K07025 HAD superfamily hydrolase; HMMPfam:IPR005834; HMMTigr:IPR006402 YP_002939266.1 Cytoplasmic, score:8.87; NOG08812 non supervised orthologous group; HMMPfam:IPR012547 YP_002939267.1 Unknown cell location; COG0346 Lactoylglutathione lyase and related lyases; HMMPfam:IPR004360 YP_002939268.1 Unknown cell location; COG0242 N-formylmethionyl-tRNA deformylase; KEGG:0peptide deformylase HMMPfam:IPR000181; BlastProDom:IPR000181; Gene3D:IPR000181; HMMPIR:IPR000181; HMMPanther:IPR000181; superfamily:IPR000181 YP_002939269.1 Unknown cell location YP_002939270.1 Unknown cell location YP_002939271.1 Extracellular, score:8.82 YP_002939272.1 Cytoplasmic, score:8.87 YP_002939273.1 Cytoplasmic, score:8.87; COG4804 Uncharacterized conserved protein; KEGG:K00961 DNA-directed DNA polymerase HMMPfam:IPR001126; HMMPfam:IPR009362; HMMPanther:IPR001126 YP_002939274.1 Cytoplasmic, score:8.87; COG2932 Predicted transcriptional regulator; KEGG:K01356 LexA repressor HMMPfam:IPR001387; HMMPfam:IPR011056; Gene3D:IPR011056; superfamily:IPR010982; superfamily:IPR015927 YP_002939275.1 Unknown cell location; COG1476 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002939276.1 Unknown cell location YP_002939277.1 Unknown cell location YP_002939278.1 Unknown cell location YP_002939279.1 Unknown cell location YP_002939280.1 Unknown cell location YP_002939281.1 Cytoplasmic, score:8.87 YP_002939282.1 Unknown cell location YP_002939283.1 Cytoplasmic, score:8.87; COG0242 N-formylmethionyl-tRNA deformylase; KEGG:0polypeptide deformylase HMMPfam:IPR000181; BlastProDom:IPR000181; Gene3D:IPR000181; HMMPIR:IPR000181; HMMPanther:IPR000181; superfamily:IPR000181 YP_002939284.1 Unknown cell location YP_002939285.1 Unknown cell location YP_002939286.1 CytoplasmicMembrane, score:9.82; COG0840 Methyl-accepting chemotaxis protein; KEGG:K03406 hypothetical protein; HMMPfam:IPR003660; HMMPfam:IPR004089; HMMPfam:IPR013163; HMMSmart:IPR003660; HMMSmart:IPR004089 YP_002939287.1 Unknown cell location YP_002939288.1 Cytoplasmic, score:8.87 YP_002939289.1 Unknown cell location YP_002939290.1 Unknown cell location YP_002939291.1 Cytoplasmic, score:8.87; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; KEGG:K00985 Appr-1-p processing enzyme family HMMPfam:IPR002589; HMMSmart:IPR002589 YP_002939292.1 CytoplasmicMembrane, score:9.97; superfamily:IPR015797 YP_002939293.1 Cytoplasmic, score:8.87; COG0551 Zn-finger domain associated with topoisomerase type I; KEGG:K03168 DNA topoisomerase I HMMPfam:IPR013498 YP_002939294.1 Cytoplasmic, score:8.87; COG3886 Predicted HKD family nuclease; KEGG:0DNA/RNA helicase HMMPfam:IPR001650; HMMPfam:IPR006935; HMMSmart:IPR001650; HMMSmart:IPR014001 YP_002939295.1 Unknown cell location; COG0500 SAM-dependent methyltransferases; KEGG:0hypothetical protein HMMPfam:IPR013217 YP_002939296.1 Unknown cell location; HMMPfam:IPR014905 YP_002939298.1 Unknown cell location YP_002939299.1 Cytoplasmic, score:8.87; COG3344 Retron-type reverse transcriptase; KEGG:K00986 RNA-directed DNA polymerase HMMPfam:IPR000477; HMMPfam:IPR013597; HMMPanther:IPR015706 YP_002939300.1 Extracellular, score:8.82 YP_002939301.1 Unknown cell location YP_002939302.1 Cytoplasmic, score:8.87; COG3943 Virulence protein; HMMPIR:IPR011204 YP_002939303.1 CytoplasmicMembrane, score:9.99 YP_002939304.1 CytoplasmicMembrane, score:9.99 YP_002939305.1 Unknown cell location YP_002939306.1 Cytoplasmic, score:8.87; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; KEGG:K07478 recombination factor protein RarA/unknown domain fusion protein; HMMPfam:IPR002589; HMMSmart:IPR002589 YP_002939307.1 Cytoplasmic, score:8.87 YP_002939308.1 Cytoplasmic, score:8.87; NOG13916 non supervised orthologous group YP_002939309.1 Unknown cell location YP_002939310.1 Cytoplasmic, score:8.87; NOG16605 non supervised orthologous group; KEGG:K09144 hypothetical protein; HMMPfam:IPR014942 YP_002939311.1 Cytoplasmic, score:8.87; NOG16907 non supervised orthologous group YP_002939312.1 Extracellular, score:8.82 YP_002939313.1 Unknown cell location; COG1475 Predicted transcriptional regulators YP_002939314.1 Unknown cell location YP_002939315.1 Unknown cell location YP_002939316.1 Extracellular, score:8.82 YP_002939317.1 Cytoplasmic, score:8.87; COG4405 Uncharacterized protein conserved in bacteria; HMMPfam:IPR009326; superfamily:IPR015947 YP_002939318.1 Cytoplasmic, score:8.87; COG1373 Predicted ATPase (AAA+ superfamily); KEGG:0ATPase YP_002939319.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528 YP_002939320.1 Unknown cell location; COG0655 Multimeric flavodoxin WrbA; HMMPfam:IPR005025 YP_002939321.1 Cytoplasmic, score:8.87; COG0656 Aldo/keto reductases, related to diketogulonate reductase; KEGG:0oxidoreductase, aldo/keto reductase family HMMPfam:IPR001395; BlastProDom:IPR001395; Gene3D:IPR001395; HMMPanther:IPR001395; ScanRegExp:IPR001395; superfamily:IPR001395 YP_002939322.1 Unknown cell location YP_002939323.1 Cytoplasmic, score:8.87; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; KEGG:K01607 gamma-carboxymuconolactone decarboxylase subunit-like protein HMMPfam:IPR003779; HMMPfam:IPR013096; Gene3D:IPR014710; superfamily:IPR011051 YP_002939324.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group YP_002939325.1 Cytoplasmic, score:9.98; COG0583 Transcriptional regulator; KEGG:K09681 transcriptional regulator GltC; HMMPfam:IPR000847; HMMPfam:IPR005119; Gene3D:IPR011991 YP_002939326.1 Unknown cell location YP_002939327.1 Unknown cell location YP_002939328.1 Extracellular, score:8.82 YP_002939329.1 Unknown cell location; COG4887 Uncharacterized metal-binding protein conserved in archaea; HMMPfam:IPR014997 YP_002939330.1 Cytoplasmic, score:8.87 YP_002939331.1 CytoplasmicMembrane, score:9.99; COG2364 Predicted membrane protein YP_002939332.1 Unknown cell location YP_002939333.1 Extracellular, score:8.82 YP_002939334.1 Unknown cell location YP_002939335.1 Unknown cell location YP_002939337.1 Cytoplasmic, score:8.87; COG1373 Predicted ATPase (AAA+ superfamily); KEGG:0hypothetical protein; superfamily:IPR011335 YP_002939339.1 CytoplasmicMembrane, score:9.49; COG0465 ATP-dependent Zn proteases; KEGG:K07767 ATP-dependent metalloprotease FtsH HMMPfam:IPR000642; HMMPfam:IPR003959; HMMPfam:IPR011546; HMMSmart:IPR003593; HMMTigr:IPR005936; ScanRegExp:IPR003960; ScanRegExp:IPR006025 YP_002939340.1 Unknown cell location; COG3049 Penicillin V acylase and related amidases; KEGG:K01442 penicillin V acylase related amidase HMMPfam:IPR003199 YP_002939341.1 Unknown cell location YP_002939342.1 CytoplasmicMembrane, score:9.75; COG0558 Phosphatidylglycerophosphate synthase; KEGG:K00995 phosphatidylglycerophosphate synthase HMMPfam:IPR000462; ScanRegExp:IPR000462 YP_002939343.1 CytoplasmicMembrane, score:9.99; COG1289 Predicted membrane protein YP_002939344.1 CytoplasmicMembrane, score:9.49; COG0642 Signal transduction histidine kinase; KEGG:0sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003660; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002939345.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 hypothetical protein; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002939346.1 Unknown cell location YP_002939347.1 Unknown cell location YP_002939348.1 Cytoplasmic, score:8.87 YP_002939349.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate YP_002939350.1 Cytoplasmic, score:8.87; COG1533 DNA repair photolyase; HMMPfam:IPR007197; BlastProDom:IPR002787 YP_002939351.1 Cytoplasmic, score:8.87; COG4422 Bacteriophage protein gp37; HMMPfam:IPR011101 YP_002939352.1 Cytoplasmic, score:8.87; COG1846 Transcriptional regulators; KEGG:K06075 transcriptional regulator MarR family; HMMPfam:IPR000835; Gene3D:IPR011991; HMMSmart:IPR000835 YP_002939353.1 Extracellular, score:7.62; COG4886 Leucine-rich repeat (LRR) protein YP_002939354.1 Cytoplasmic, score:8.87; COG0582 Integrase; KEGG:K03733 integrase; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002939355.1 Cytoplasmic, score:8.87; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002939356.1 Cytoplasmic, score:8.87; HMMTigr:IPR010093; superfamily:IPR009061 YP_002939357.1 Cytoplasmic, score:8.87 YP_002939358.1 Unknown cell location YP_002939359.1 Cytoplasmic, score:8.87; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; KEGG:K01144 putative conjugal transfer protein HMMPfam:IPR005053 YP_002939360.1 CytoplasmicMembrane, score:7.63 YP_002939361.1 Unknown cell location YP_002939362.1 Unknown cell location; NOG15355 non supervised orthologous group YP_002939363.1 Cytoplasmic, score:8.87; NOG11569 non supervised orthologous group; HMMPfam:IPR014942; ScanRegExp:IPR002048 YP_002939364.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07659 DNA-binding response regulator; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; Gene3D:IPR011991; HMMSmart:IPR001789; superfamily:IPR011006 YP_002939365.1 CytoplasmicMembrane, score:9.99; COG4767 Glycopeptide antibiotics resistance protein; HMMPfam:IPR006976 YP_002939366.1 CytoplasmicMembrane, score:9.88; COG0642 Signal transduction histidine kinase; KEGG:0VanS HMMPfam:IPR003594; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002939367.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K01990 hypothetical protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002939368.1 CytoplasmicMembrane, score:9.99 YP_002939369.1 Unknown cell location YP_002939370.1 Unknown cell location YP_002939371.1 Unknown cell location YP_002939372.1 Unknown cell location; COG0582 Integrase; HMMPfam:IPR002104; Gene3D:IPR013762; superfamily:IPR011010 YP_002939373.1 Unknown cell location; COG0582 Integrase; superfamily:IPR010998 YP_002939374.1 Cytoplasmic, score:8.87; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002939375.1 Unknown cell location YP_002939376.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K02027 ABC transporter (substrate-binding protein); HMMPfam:IPR006059 YP_002939377.1 Cytoplasmic, score:8.87; NOG11699 non supervised orthologous group YP_002939378.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K02026 ABC transporter permease; HMMPfam:IPR000515 YP_002939379.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K02025 hypothetical protein; HMMPfam:IPR000515 YP_002939380.1 Unknown cell location; COG2182 Maltose-binding periplasmic proteins/domains; KEGG:K10108 maltose-binding protein; HMMPfam:IPR006059 YP_002939381.1 Cytoplasmic, score:8.87; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; KEGG:K07718 two-component sensor kinase YesM HMMPfam:IPR003594; HMMPfam:IPR003660; HMMPfam:IPR010559; Gene3D:IPR003594; superfamily:IPR003594 YP_002939382.1 Cytoplasmic, score:9.98; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; KEGG:K07720 CheY-like receiver domains; HMMPfam:IPR000005; HMMPfam:IPR001789; BlastProDom:IPR001789; Gene3D:IPR012287; HMMSmart:IPR000005; HMMSmart:IPR001789; ScanRegExp:IPR000005; superfamily:IPR009057; superfamily:IPR011006 YP_002939383.1 Unknown cell location YP_002939384.1 Cytoplasmic, score:8.87; COG2382 Enterochelin esterase and related enzymes YP_002939385.1 Cytoplasmic, score:8.87 YP_002939386.1 Cytoplasmic, score:8.87; HMMPfam:IPR002104; superfamily:IPR011010 YP_002939387.1 Cytoplasmic, score:8.87; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 site-specific recombinase; HMMPfam:IPR006119; HMMPfam:IPR011109; Gene3D:IPR006119; superfamily:IPR006119 YP_002939388.1 Cytoplasmic, score:8.87; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 cassette chromosome recombinase B; HMMPfam:IPR006119; HMMPfam:IPR011109; Gene3D:IPR006119; superfamily:IPR006119 YP_002939389.1 Cytoplasmic, score:8.87; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 site-specific recombinase; HMMPfam:IPR006119; HMMPfam:IPR011109; Gene3D:IPR006119; superfamily:IPR006119 YP_002939390.1 Unknown cell location YP_002939391.1 Cytoplasmic, score:8.87; COG2337 Growth inhibitor; KEGG:0PemK family of DNA-binding proteins; HMMPfam:IPR003477; Gene3D:IPR011067; superfamily:IPR011067 YP_002939392.1 Cytoplasmic, score:8.87; HMMPfam:IPR007630; HMMTigr:IPR014284; superfamily:IPR013324 YP_002939393.1 Unknown cell location YP_002939394.1 Unknown cell location YP_002939395.1 Cytoplasmic, score:8.87; NOG36101 non supervised orthologous group; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002939396.1 Extracellular, score:8.82 YP_002939397.1 Cytoplasmic, score:8.87 YP_002939398.1 Cytoplasmic, score:8.87 YP_002939399.1 Unknown cell location YP_002939400.1 Cytoplasmic, score:8.87 YP_002939401.1 Unknown cell location YP_002939402.1 Cytoplasmic, score:8.87; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; KEGG:K00961 DNA-directed DNA polymerase HMMPfam:IPR001126; HMMPanther:IPR001126 YP_002939403.1 Cytoplasmic, score:8.87; COG2932 Predicted transcriptional regulator; KEGG:K03503 putative prophage repressor HMMPfam:IPR011056; Gene3D:IPR011056; superfamily:IPR010982; superfamily:IPR015927 YP_002939404.1 Cytoplasmic, score:8.87; COG1476 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002939405.1 Cytoplasmic, score:8.87; COG2315 Uncharacterized protein conserved in bacteria; HMMPfam:IPR007351 YP_002939406.1 Cytoplasmic, score:8.87; NOG22231 non supervised orthologous group; HMMPfam:IPR008687 YP_002939407.1 Cytoplasmic, score:8.87; COG3843 Type IV secretory pathway, VirD2 components (relaxase); HMMPfam:IPR005094 YP_002939408.1 Cytoplasmic, score:8.87 YP_002939409.1 Cytoplasmic, score:8.87; COG1671 Uncharacterized protein conserved in bacteria; KEGG:K09768 uncharacterized conserved protein, YQXD B.subtilis ortholog; HMMPfam:IPR003791; BlastProDom:IPR003791 YP_002939410.1 Cytoplasmic, score:8.87; COG2135 Uncharacterized conserved protein; HMMPfam:IPR003738; HMMPanther:IPR003738 YP_002939411.1 Cytoplasmic, score:8.87 YP_002939412.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K02483 transcriptional regulatory protein; HMMPfam:IPR001867; BlastProDom:IPR001867; Gene3D:IPR011991 YP_002939413.1 Unknown cell location; COG1686 D-alanyl-D-alanine carboxypeptidase; KEGG:K01286 serine-type D-Ala-D-Ala carboxypeptidase HMMPfam:IPR001967; superfamily:IPR012338 YP_002939414.1 Cytoplasmic, score:8.87 YP_002939415.1 CytoplasmicMembrane, score:10.00; COG0577 ABC-type antimicrobial peptide transport system, permease component; HMMPfam:IPR003838; ScanRegExp:IPR002114 YP_002939416.1 CytoplasmicMembrane, score:10.00; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:0ABC-type transport system, involved in lipoprotein release, ATPase component; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002939417.1 Unknown cell location; COG0845 Membrane-fusion protein YP_002939418.1 Cytoplasmic, score:9.36; COG0642 Signal transduction histidine kinase; KEGG:0two-component sensor histidine kinase HMMPfam:IPR003594; HMMPfam:IPR003661; Gene3D:IPR003594; HMMSmart:IPR003594; HMMSmart:IPR003661; superfamily:IPR003594; superfamily:IPR009082 YP_002939419.1 Cytoplasmic, score:9.98; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG:K07659 DNA-binding response regulator; HMMPfam:IPR001789; HMMPfam:IPR001867; BlastProDom:IPR001789; BlastProDom:IPR001867; HMMSmart:IPR001789; superfamily:IPR011006 YP_002939420.1 Unknown cell location; COG3655 Predicted transcriptional regulator; superfamily:IPR010982 YP_002939421.1 Unknown cell location; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_002939422.1 Extracellular, score:8.82 YP_002939423.1 Cytoplasmic, score:8.87; COG3170 Tfp pilus assembly protein FimV YP_002939424.1 Cytoplasmic, score:8.87; COG4646 DNA methylase; KEGG:0possible adenine-specific DNA methylase HMMPfam:IPR001650; HMMPfam:IPR003356; HMMSmart:IPR014001 YP_002939425.1 Cytoplasmic, score:8.87 YP_002939426.1 Cytoplasmic, score:8.87 YP_002939427.1 Extracellular, score:8.82 YP_002939428.1 Extracellular, score:8.82 YP_002939429.1 Cellwall, score:10.00; COG4932 Predicted outer membrane protein; HMMPfam:IPR001899; HMMPfam:IPR008454; HMMTigr:IPR001899; superfamily:IPR008969 YP_002939430.1 Cytoplasmic, score:8.87; COG0550 Topoisomerase IA; KEGG:K03169 DNA topoisomerase HMMPfam:IPR006171; HMMPfam:IPR013497; Gene3D:IPR013824; Gene3D:IPR013826; HMMPanther:IPR000380; HMMSmart:IPR003601; HMMSmart:IPR003602; HMMSmart:IPR006154; HMMTigr:IPR005738; superfamily:IPR000380 YP_002939431.1 Unknown cell location; NOG36404 non supervised orthologous group YP_002939432.1 Cytoplasmic, score:8.87 YP_002939433.1 Extracellular, score:9.55; COG0791 Cell wall-associated hydrolases (invasion-associated proteins); KEGG:0peptidase, M23 family HMMPfam:IPR000064; HMMPfam:IPR002886; HMMPanther:IPR002886; superfamily:IPR011055 YP_002939434.1 Cytoplasmic, score:8.87; COG3451 Type IV secretory pathway, VirB4 components YP_002939435.1 CytoplasmicMembrane, score:9.75; NOG33085 non supervised orthologous group YP_002939436.1 CytoplasmicMembrane, score:9.99; NOG28113 non supervised orthologous group YP_002939437.1 Unknown cell location YP_002939438.1 Cytoplasmic, score:8.87; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 site-specific recombinase; HMMPfam:IPR006119; HMMPfam:IPR011109; Gene3D:IPR006119; ScanRegExp:IPR001529; superfamily:IPR006119 YP_002939439.1 Unknown cell location YP_002939440.1 Cytoplasmic, score:8.87; COG1484 DNA replication protein; KEGG:K02315 hypothetical protein HMMSmart:IPR003593 YP_002939441.1 Unknown cell location; NOG34358 non supervised orthologous group; HMMPfam:IPR010724 YP_002939442.1 Cytoplasmic, score:8.87 YP_002939443.1 Cytoplasmic, score:8.87; COG3843 Type IV secretory pathway, VirD2 components (relaxase); HMMPfam:IPR005094 YP_002939444.1 Cytoplasmic, score:8.87; HMMPfam:IPR008687 YP_002939445.1 Unknown cell location YP_002939446.1 Cytoplasmic, score:8.87 YP_002939447.1 Unknown cell location YP_002939448.1 Unknown cell location YP_002939449.1 CytoplasmicMembrane, score:9.99; NOG16845 non supervised orthologous group; KEGG:K01992 hypothetical protein YP_002939450.1 CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K01990 transporter; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439 YP_002939451.1 Cytoplasmic, score:8.87; COG1725 Predicted transcriptional regulators; KEGG:K07979 transcriptional regulator, GntR family; HMMPfam:IPR000524; Gene3D:IPR011991; HMMSmart:IPR000524 YP_002939452.1 Unknown cell location YP_002939453.1 Cytoplasmic, score:8.87; COG3505 Type IV secretory pathway, VirD4 components; KEGG:K03205 TraG protein; HMMPfam:IPR003688 YP_002939454.1 Unknown cell location YP_002939455.1 Unknown cell location YP_002939456.1 Cytoplasmic, score:8.87 YP_002939457.1 Cytoplasmic, score:8.87; COG5545 Predicted P-loop ATPase and inactivated derivatives; HMMPfam:IPR007936 YP_002939458.1 Cytoplasmic, score:8.87; COG0358 DNA primase (bacterial type); KEGG:K02316 DNA primase HMMPfam:IPR002694; BlastProDom:IPR002694; Gene3D:IPR002694; HMMSmart:IPR002694 YP_002939459.1 Cytoplasmic, score:8.87; NOG17369 non supervised orthologous group YP_002939460.1 Unknown cell location YP_002939461.1 Cytoplasmic, score:8.87; COG1961 Site-specific recombinases, DNA invertase Pin homologs; KEGG:K06400 DNA recombinase, putative; HMMPfam:IPR006119; HMMPfam:IPR011109; Gene3D:IPR006119; superfamily:IPR006119 YP_002939462.1 Unknown cell location; COG3505 Type IV secretory pathway, VirD4 components; KEGG:K03205 TraG protein; HMMPfam:IPR003688 YP_002939463.1 Cytoplasmic, score:8.87 YP_002939464.1 Cytoplasmic, score:8.87; COG1484 DNA replication protein; KEGG:K02315 hypothetical protein HMMPfam:IPR002611; HMMSmart:IPR003593 YP_002939465.1 Unknown cell location; NOG34358 non supervised orthologous group; HMMPfam:IPR010724 YP_002939466.1 Cytoplasmic, score:8.87; NOG16925 non supervised orthologous group; HMMPfam:IPR010724 YP_002939467.1 Unknown cell location YP_002939468.1 Cytoplasmic, score:8.87; COG0629 Single-stranded DNA-binding protein; KEGG:K03111 single-strand DNA-binding protein; HMMPfam:IPR000424; Gene3D:IPR012340; HMMPanther:IPR011344; HMMTigr:IPR011344 YP_002939469.1 Unknown cell location YP_002939470.1 CytoplasmicMembrane, score:9.99 YP_002939471.1 Unknown cell location; COG1475 Predicted transcriptional regulators; KEGG:K03497 chromosome partitioning parB family protein; HMMPfam:IPR003115; HMMSmart:IPR003115; HMMTigr:IPR004437 YP_002939472.1 Cytoplasmic, score:8.87; COG1192 ATPases involved in chromosome partitioning; KEGG:K03496 chromosome partitioning protein ParA; HMMPfam:IPR002586 YP_002939473.1 Unknown cell location; COG4974 Site-specific recombinase XerD; HMMPfam:IPR002104; Gene3D:IPR013087; Gene3D:IPR013762; superfamily:IPR010998; superfamily:IPR011010 YP_002939474.1 Cytoplasmic, score:8.87 YP_002939476.1 Unknown cell location YP_002939477.1 Cytoplasmic, score:8.87; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002939478.1 Cytoplasmic, score:8.87; COG2207 AraC-type DNA-binding domain-containing proteins; KEGG:K02854 L-rhamnose operon transcriptional activator; HMMPfam:IPR000005; Gene3D:IPR012287; HMMSmart:IPR000005; superfamily:IPR009057; superfamily:IPR011051 YP_002939479.1 Unknown cell location YP_002939480.1 Cytoplasmic, score:8.87; NOG31554 non supervised orthologous group; HMMPfam:IPR013976; HMMSmart:IPR003607 YP_002939481.1 Cytoplasmic, score:9.65; COG0110 Acetyltransferase (isoleucine patch superfamily); KEGG:0putative acetyltransferase in HXT11-HXT8 intergenic region superfamily:IPR011004 YP_002939482.1 Cytoplasmic, score:8.87; COG0546 Predicted phosphatases; KEGG:K01091 phosphoglycolate phosphatase (putative) HMMPfam:IPR005834; HMMTigr:IPR006439 YP_002939483.1 Unknown cell location YP_002939484.1 CytoplasmicMembrane, score:10.00 YP_002939485.1 CytoplasmicMembrane, score:9.99; COG2059 Chromate transport protein ChrA; KEGG:K07240 chromate transport protein; HMMPfam:IPR003370 YP_002939486.1 CytoplasmicMembrane, score:9.99; COG2059 Chromate transport protein ChrA; KEGG:K07240 chromate transport protein; HMMPfam:IPR003370 YP_002939487.1 CytoplasmicMembrane, score:10.00; COG0682 Prolipoprotein diacylglyceryltransferase; KEGG:0hypothetical protein HMMPfam:IPR001640; HMMTigr:IPR001640; ScanRegExp:IPR001640 YP_002939488.1 Cytoplasmic, score:8.87; COG2059 Chromate transport protein ChrA YP_002939489.1 CytoplasmicMembrane, score:9.75; COG2059 Chromate transport protein ChrA; KEGG:K07240 chromate transport protein; HMMPfam:IPR003370 YP_002939490.1 Cytoplasmic, score:9.98; COG0583 Transcriptional regulator; KEGG:K03576 LysR, substrate-binding; HMMPfam:IPR000847; HMMPfam:IPR005119; Gene3D:IPR011991 YP_002939491.1 Unknown cell location YP_002939492.1 Cytoplasmic, score:8.87 YP_002939493.1 Cytoplasmic, score:8.87; COG1335 Amidases related to nicotinamidase; KEGG:K05993 amidase from nicotinamidase family HMMPfam:IPR000868; Gene3D:IPR000868; superfamily:IPR000868 YP_002939494.1 Unknown cell location; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; KEGG:K00985 Appr-1-p processing enzyme family HMMPfam:IPR002589; HMMSmart:IPR002589 YP_002939495.1 Cytoplasmic, score:8.87; NOG34332 non supervised orthologous group; HMMTigr:IPR006442 YP_002939496.1 Unknown cell location; NOG13941 non supervised orthologous group; HMMPfam:IPR007712 YP_002939497.1 Unknown cell location YP_002939498.1 Unknown cell location; COG0655 Multimeric flavodoxin WrbA; HMMPfam:IPR005025 YP_002939499.1 Unknown cell location YP_002939500.1 Unknown cell location YP_002939501.1 Cytoplasmic, score:8.87 YP_002939502.1 Extracellular, score:8.82 YP_002939503.1 Unknown cell location YP_002939504.1 Unknown cell location YP_002939505.1 Cytoplasmic, score:8.87; NOG26860 non supervised orthologous group YP_002939506.1 Unknown cell location YP_002939507.1 Cytoplasmic, score:8.87 YP_002939508.1 Unknown cell location YP_002939509.1 CytoplasmicMembrane, score:7.63; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; HMMPfam:IPR003594; Gene3D:IPR003594; superfamily:IPR003594 YP_002939510.1 Unknown cell location YP_002939511.1 Cytoplasmic, score:9.98; COG3279 Response regulator of the LytR/AlgR family; KEGG:K07705 two-component system response regulator protein; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002939512.1 Unknown cell location YP_002939513.1 Cytoplasmic, score:8.87 YP_002939514.1 Unknown cell location YP_002939515.1 Unknown cell location; NOG26860 non supervised orthologous group YP_002939516.1 Unknown cell location YP_002939517.1 Unknown cell location YP_002939518.1 Cytoplasmic, score:8.87 YP_002939519.1 Unknown cell location YP_002939520.1 Unknown cell location YP_002939521.1 Cytoplasmic, score:8.87 YP_002939522.1 Unknown cell location YP_002939523.1 Cytoplasmic, score:8.87; NOG26860 non supervised orthologous group YP_002939524.1 Unknown cell location; superfamily:IPR003204 YP_002939525.1 Unknown cell location YP_002939526.1 Unknown cell location YP_002939528.1 CytoplasmicMembrane, score:9.99; COG5658 Predicted integral membrane protein; HMMPfam:IPR012867 YP_002939529.1 Cytoplasmic, score:8.87; COG0640 Predicted transcriptional regulators; KEGG:K03892 transcriptional regulator (ArsR family); HMMPfam:IPR001845; Gene3D:IPR011991; HMMSmart:IPR001845 YP_002939530.1 Unknown cell location YP_002939531.1 Cytoplasmic, score:8.87 YP_002939532.1 CytoplasmicMembrane, score:9.97; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; HMMPfam:IPR003594; Gene3D:IPR003594; superfamily:IPR003594 YP_002939533.1 Cytoplasmic, score:9.98; COG3279 Response regulator of the LytR/AlgR family; KEGG:K07705 transcriptional regulator, LytR/AlgR family; HMMPfam:IPR001789; HMMPfam:IPR007492; BlastProDom:IPR001789; HMMSmart:IPR001789; superfamily:IPR011006 YP_002939534.1 Unknown cell location YP_002939535.1 Cytoplasmic, score:8.87; superfamily:IPR000380 YP_002939536.1 Cytoplasmic, score:8.87; COG4679 Phage-related protein; HMMPfam:IPR009241 YP_002939537.1 Cytoplasmic, score:8.87; COG1396 Predicted transcriptional regulators; HMMPfam:IPR001387; HMMSmart:IPR001387; superfamily:IPR010982 YP_002939538.1 Cytoplasmic, score:9.98; COG0366 Glycosidases; KEGG:K01182 oligo-1,6-glucosidase HMMPfam:IPR006047; Gene3D:IPR013780; Gene3D:IPR013781; HMMSmart:IPR006589 YP_002939539.1 CytoplasmicMembrane, score:10.00; COG0395 ABC-type sugar transport system, permease component; KEGG:K10119 sugar ABC transporter, permease protein; HMMPfam:IPR000515 YP_002939540.1 CytoplasmicMembrane, score:10.00; COG1175 ABC-type sugar transport systems, permease components; KEGG:K10118 sugar ABC transporter, permease protein, putative; HMMPfam:IPR000515 YP_002939541.1 Unknown cell location YP_002939542.1 Unknown cell location; COG1653 ABC-type sugar transport system, periplasmic component; KEGG:K10117 hypothetical ABC transporter extracellular binding protein; HMMPfam:IPR006059 YP_002939543.1 Cytoplasmic, score:9.98; COG1609 Transcriptional regulators; KEGG:K03484 hypothetical protein; HMMPfam:IPR000843; HMMPfam:IPR001761; HMMSmart:IPR000843; superfamily:IPR010982 YP_002939544.1 Unknown cell location YP_002939545.1 CytoplasmicMembrane, score:9.99; COG0534 Na+-driven multidrug efflux pump; KEGG:K03327 hypothetical protein; HMMPfam:IPR002528; HMMPanther:IPR002528; HMMPanther:IPR015522; HMMTigr:IPR002528 YP_002939546.1 Unknown cell location YP_002939547.1 Cytoplasmic, score:9.98; COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; KEGG:K01223 6-phospho-beta-glucosidase HMMPfam:IPR001360; Gene3D:IPR013781; HMMPanther:IPR001360; ScanRegExp:IPR001360 YP_002939548.1 Cytoplasmic, score:9.98; COG1447 Phosphotransferase system cellobiose-specific component IIA; KEGG:K00890 PTS family cellobiose porter component IIA HMMPfam:IPR003188; BlastProDom:IPR003188; Gene3D:IPR003188; HMMPIR:IPR003188; superfamily:IPR003188 YP_002939549.1 CytoplasmicMembrane, score:10.00; COG1455 Phosphotransferase system cellobiose-specific component IIC; KEGG:K02761 PTS system, IIC component; HMMPfam:IPR003352; HMMTigr:IPR004501; ScanRegExp:IPR001969 YP_002939550.1 Cytoplasmic, score:9.98; COG1440 Phosphotransferase system cellobiose-specific component IIB; KEGG:K02760 hypothetical protein HMMPfam:IPR003501; HMMTigr:IPR014350 YP_002939551.1 Unknown cell location; COG1737 Transcriptional regulators; KEGG:K00845 glucokinase HMMPfam:IPR000281; HMMPfam:IPR001347; ScanRegExp:IPR000843 YP_002939552.1 Extracellular, score:8.82 YP_002939553.1 Unknown cell location YP_002939554.1 Cytoplasmic, score:8.87 YP_002939555.1 Cytoplasmic, score:8.87; COG2206 HD-GYP domain; HMMPfam:IPR006674; HMMSmart:IPR003607; superfamily:IPR005110 YP_002939556.1 Cytoplasmic, score:8.87; NOG16916 non supervised orthologous group YP_002939557.1 Cytoplasmic, score:8.87; COG1475 Predicted transcriptional regulators; KEGG:K03497 stage 0 sporulation protein J; HMMPfam:IPR003115; HMMSmart:IPR003115; HMMTigr:IPR004437 YP_002939558.1 Cytoplasmic, score:8.87; COG1192 ATPases involved in chromosome partitioning; KEGG:K03496 ParA, ParA family ATPase; HMMPfam:IPR002586 YP_002939559.1 Extracellular, score:8.82 YP_002939560.1 Cytoplasmic, score:9.98; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; KEGG:K02479 two-component response regulator (extracellular proteinase response regulator); HMMPfam:IPR000792; HMMPfam:IPR001789; BlastProDom:IPR000792; BlastProDom:IPR001789; FPrintScan:IPR000792; Gene3D:IPR011991; HMMSmart:IPR000792; HMMSmart:IPR001789; ScanRegExp:IPR000792; superfamily:IPR011006 YP_002939561.1 CytoplasmicMembrane, score:9.49; COG4585 Signal transduction histidine kinase; KEGG:K07777 histidine kinase HMMPfam:IPR003594; HMMPfam:IPR011712; FPrintScan:IPR004358; Gene3D:IPR003594; HMMSmart:IPR003594; superfamily:IPR003594 YP_002939562.1 Unknown cell location YP_002939563.1 Unknown cell location; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); KEGG:K01563 alpha/beta hydrolase fold YP_002939564.1 Cytoplasmic, score:8.87; COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; KEGG:K03501 glucose-inhibited division protein B HMMPfam:IPR003682; BlastProDom:IPR003682; HMMTigr:IPR003682 YP_002939565.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002939566.1 Cytoplasmic, score:8.87; COG0486 Predicted GTPase; KEGG:K03650 tRNA modification GTPase TrmE; HMMPfam:IPR002917; FPrintScan:IPR001806; FPrintScan:IPR006073; HMMTigr:IPR004520; HMMTigr:IPR005225; HMMTigr:IPR005289 YP_002939567.1 Cytoplasmic, score:8.87; COG1847 Predicted RNA-binding protein; KEGG:K06346 predicted RNA-binding protein Jag, SpoIIIJ-associated; HMMPfam:IPR001374; HMMSmart:IPR001374; superfamily:IPR009019 YP_002939568.1 CytoplasmicMembrane, score:9.99; COG0706 Preprotein translocase subunit YidC; KEGG:K03217 stage III sporulation protein J; HMMPfam:IPR001708; HMMPanther:IPR001708 YP_002939569.1 Unknown cell location; COG0759 Uncharacterized conserved protein; KEGG:K08998 hypothetical protein; HMMPfam:IPR002696; BlastProDom:IPR002696; HMMTigr:IPR002696 YP_002939570.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates YP_002939571.1 in Escherichia coli transcription of this gene is enhanced by polyamines