-- dump date 20120504_144415 -- class Genbank::CDS -- table cds_note -- id note YP_002884382.1 KEGG: bce:BC1859 phage protein YP_002884383.1 KEGG: bce:BC1860 phage protein YP_002884384.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; KEGG: bce:BC1861 DNA/RNA helicase YP_002884385.1 KEGG: bce:BC1862 phage protein YP_002884386.1 PFAM: DNA primase small subunit; KEGG: bce:BC1863 MCM domain-contain protein YP_002884387.1 KEGG: bcr:BCAH187_A0647 hypothetical protein YP_002884388.1 KEGG: bar:GBAA0442 hypothetical protein YP_002884389.1 KEGG: bce:BC1864 DNA polymerase I; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase YP_002884391.1 KEGG: bce:BC1865 phage protein YP_002884393.1 PFAM: 3D domain protein; KEGG: bce:BC4922 hypothetical protein YP_002884396.1 KEGG: sus:Acid_7446 hypothetical protein YP_002884399.1 KEGG: bce:BC1885 phage protein YP_002884404.1 KEGG: bce:BC1889 phage protein YP_002884407.1 PFAM: portal protein SPP1; KEGG: bha:BH3532 hypothetical protein YP_002884408.1 TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7; KEGG: sit:TM1040_0803 phage head morphogenesis protein, SPP1 gp7 YP_002884410.1 KEGG: conserved hypothetical protein YP_002884412.1 KEGG: dvl:Dvul_1065 major head protein YP_002884415.1 KEGG: bsu:BSU26100 hypothetical protein YP_002884419.1 KEGG: bsu:BSU12660 hypothetical protein YP_002884421.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: bcr:BCAH187_A3994 phage protein YP_002884422.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: bsu:BSU26020 hypothetical protein YP_002884423.1 PFAM: NLP/P60 protein; 3D domain protein; KEGG: baa:BXB0007 NLP/P60 family protein YP_002884426.1 PFAM: Baseplate J family protein; KEGG: bsu:BSU25980 hypothetical protein YP_002884427.1 KEGG: bsu:BSU12740 hypothetical protein YP_002884430.1 KEGG: predicted gene, 100041170 YP_002884434.1 KEGG: hypothetical protein YP_002884435.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: bcb:BCB4264_A2690 L-alanyl-D-glutamate peptidase YP_002884439.1 KEGG: bha:BH1765 hypothetical protein YP_002884440.1 PFAM: protein of unknown function DUF1273; KEGG: bcb:BCB4264_A1614 hypothetical protein YP_002884441.1 PFAM: DivIVA family protein; KEGG: bcy:Bcer98_1281 DivIVA family protein YP_002884445.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bac:BamMC406_0905 monooxygenase FAD-binding YP_002884446.1 PFAM: NUDIX hydrolase; KEGG: bha:BH1281 hypothetical protein YP_002884448.1 KEGG: oan:Oant_2331 hypothetical protein YP_002884450.1 PFAM: 3D domain protein; KEGG: bcr:BCAH187_A3009 enterotoxin YP_002884451.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcz:BCZK2059 glycine betaine ABC transporter ATP-binding protein YP_002884452.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: bcr:BCAH187_A2390 glycine betaine/L-proline ABC transporter permease and substrate-binding protein YP_002884453.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: bcy:Bcer98_3480 diacylglycerol kinase catalytic region YP_002884454.1 PFAM: sodium:neurotransmitter symporter; KEGG: bha:BH0217 sodium-dependent transporter YP_002884455.1 KEGG: hypothetical protein YP_002884456.1 PFAM: toxic anion resistance family protein; KEGG: bsu:BSU00260 hypothetical protein YP_002884457.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: abu:Abu_0039 dCMP deaminase YP_002884459.1 catalyzes the formation of L-histidinol from L-histidinol phosphate YP_002884460.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: bcb:BCB4264_A1457 ATP phosphoribosyltransferase, regulatory subunit YP_002884461.1 KEGG: bcz:BCZK1290 ATP phosphoribosyltransferase catalytic subunit; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_002884462.1 KEGG: bat:BAS1317 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase YP_002884463.1 PFAM: aminotransferase class I and II; KEGG: tcx:Tcr_1194 histidinol-phosphate aminotransferase YP_002884464.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: rpd:RPD_0415 imidazoleglycerol-phosphate dehydratase YP_002884465.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_002884466.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: sat:SYN_00761 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002884467.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: bce:BC1410 imidazole glycerol phosphate synthase subunit HisF YP_002884468.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: ppr:PBPRA1085 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein YP_002884469.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase; KEGG: bsu:BSU34860 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein YP_002884470.1 KEGG: pmu:PM0373 hypothetical protein YP_002884471.1 KEGG: bce:BC4658 maltose O-acetyltransferase YP_002884472.1 PFAM: aminotransferase class I and II; KEGG: His8; Histidinol-phosphate aminotransferase, chloroplast precursor, probable; K00817 histidinol-phosphate aminotransferase YP_002884473.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bha:BH1461 ABC transporter (substrate-binding protein) YP_002884474.1 KEGG: bcb:BCB4264_A0753 hypothetical protein YP_002884475.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcz:BCZK2553 acetyltransferase YP_002884476.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH0477 hypothetical protein YP_002884477.1 In Listeria monocytogenes this protein binds a specific sites on DNA, influencing the topology and transcription; regulates flaA, proU and ompC; is osmoregulated YP_002884479.1 PFAM: FAD dependent oxidoreductase; KEGG: bha:BH1848 hypothetical protein YP_002884480.1 PFAM: GCN5-related N-acetyltransferase; KEGG: asu:Asuc_1059 GCN5-related N-acetyltransferase YP_002884481.1 PFAM: protein of unknown function DUF1333; KEGG: bcr:BCAH187_A3818 hypothetical protein YP_002884482.1 This protein performs the mismatch recognition step during the DNA repair process YP_002884483.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH2368 DNA mismatch repair protein YP_002884484.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_002884485.1 KEGG: bat:BAS1945 hypothetical protein YP_002884486.1 PFAM: Barstar (barnase inhibitor); KEGG: pfl:PFL_2382 ribonuclease inhibitor YP_002884487.1 KEGG: hypothetical protein YP_002884490.1 PFAM: formate/nitrite transporter; KEGG: bcr:BCAH187_A1461 formate/nitrite transporter family protein YP_002884491.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates YP_002884492.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: bcy:Bcer98_2251 anaerobic ribonucleoside-triphosphate reductase activating protein YP_002884493.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bca:BCE_1254 fumarylacetoacetate hydrolase family protein YP_002884494.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: bsu:BSU40360 hypothetical protein YP_002884495.1 KEGG: mxa:MXAN_6481 hypothetical protein YP_002884496.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bcz:BCZK0314 amidohydrolase YP_002884497.1 TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC; Citrate transporter; KEGG: bcu:BCAH820_0372 Na+/H+ antiporter NhaC YP_002884498.1 KEGG: bca:BCE_0434 transcriptional regulator domain-containing protein YP_002884499.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bat:BAS0324 mandelate racemase/muconate lactonizing enzyme family protein YP_002884500.1 KEGG: bcu:BCAH820_0370 hypothetical protein YP_002884501.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bcy:Bcer98_3922 GDSL family lipase YP_002884502.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcr:BCAH187_A5579 ABC transporter ATP-binding protein YP_002884503.1 KEGG: bcz:BCZK5097 ABC transporter permease; bacitracin transport permease YP_002884504.1 PFAM: peptidase M4 thermolysin; peptidase M4 thermolysin; Propeptide peptidase M4 and M36; Propeptide PepSY amd peptidase M4; KEGG: bcy:Bcer98_0515 thermolysin YP_002884505.1 PFAM: protein of unknown function DUF344; KEGG: gme:Gmet_1092 polyphosphate:AMP phosphotransferase YP_002884506.1 PFAM: AmiS/UreI transporter; KEGG: bcb:BCB4264_A5573 transporter YP_002884508.1 KEGG: bcr:BCAH187_A3647 YokH YP_002884510.1 KEGG: bcy:Bcer98_2391 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_002884511.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: bha:BH2365 RNA-binding protein Hfq YP_002884513.1 PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dps:DP0783 hypothetical protein YP_002884514.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: gbe:GbCGDNIH1_0170 GTP-dependent regulatory protein YP_002884515.1 PFAM: 5'-3' exonuclease; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; KEGG: bha:BH2180 5'-3' exonuclease YP_002884516.1 KEGG: bha:BH1770 hypothetical protein YP_002884517.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: bsu:BSU33040 fumarate hydratase YP_002884518.1 KEGG: wsu:WS0023 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002884519.1 PFAM: dihydrofolate reductase region; KEGG: bha:BH3450 dihydrofolate reductase YP_002884520.1 KEGG: bsu:BSU21820 thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: thymidylate synthase YP_002884521.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: dvm:DvMF_0594 intracellular protease, PfpI family YP_002884522.1 PFAM: protein of unknown function DUF1112; KEGG: xcv:XCV1077 hypothetical protein YP_002884523.1 PFAM: FAD dependent oxidoreductase; KEGG: bcy:Bcer98_1848 FAD dependent oxidoreductase YP_002884524.1 PFAM: regulatory protein TetR; KEGG: bha:BH3332 hypothetical protein YP_002884525.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bca:BCE_3610 ABC transporter ATP-binding protein YP_002884526.1 KEGG: bcb:BCB4264_A3701 ABC transporter permease YP_002884527.1 PFAM: aldo/keto reductase; KEGG: bsu:BSU33400 hypothetical protein YP_002884528.1 KEGG: hypothetical protein YP_002884529.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase subunit alpha domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: bsu:BSU18450 glutamate synthase (large subunit) YP_002884530.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: bsu:BSU18440 glutamate synthase subunit beta YP_002884531.1 PFAM: Na+/H+ antiporter NhaC; Citrate transporter; KEGG: maq:Maqu_0056 Na+/H+ antiporter NhaC YP_002884532.1 PFAM: protein of unknown function DUF28; KEGG: bha:BH3259 hypothetical protein YP_002884533.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcy:Bcer98_2823 MarR family transcriptional regulator YP_002884534.1 PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: bcr:BCAH187_A4504 aldehyde-alcohol dehydrogenase YP_002884537.1 KEGG: bcb:BCB4264_A3325 hypothetical protein YP_002884538.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bha:BH0826 transcriptional repressor YP_002884539.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: bcr:BCAH187_A3768 1-phosphofructokinase YP_002884540.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bha:BH0828 PTS system, fructose-specific enzyme II, BC component YP_002884541.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rce:RC1_3969 acetyltransferase, GNAT family YP_002884542.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcr:BCAH187_A1798 glyoxalase family protein YP_002884544.1 Catalyzes the phosphorylation of UMP to UDP YP_002884545.1 KEGG: bcb:BCB4264_A3047 hypothetical protein YP_002884547.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sfr:Sfri_2815 redoxin domain protein YP_002884548.1 PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bsu:BSU31260 methyl-accepting chemotaxis protein YP_002884549.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: bcz:pE33L466_0042 transposase YP_002884550.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: bsu:BSU36590 hypothetical protein YP_002884551.1 PFAM: OsmC family protein; KEGG: net:Neut_1426 OsmC family protein YP_002884552.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU06920 hypothetical protein YP_002884553.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bat:BAS3390 Gfo/Idh/MocA family oxidoreductase YP_002884554.1 KEGG: bcz:BCZK5065 membrane protein; regulatory protein YP_002884555.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: tgr:Tgr7_0290 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002884556.1 KEGG: similar to novel pim oncogene family protein YP_002884558.1 KEGG: CGLD25; hypothetical protein YP_002884559.1 PFAM: type IV pilus assembly PilZ; KEGG: bha:BH0461 hypothetical protein YP_002884561.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: bsu:BSU21980 hypothetical protein YP_002884562.1 TIGRFAM: M6 family metalloprotease domain protein; PFAM: peptidase M6 immune inhibitor A; KEGG: bcb:BCB4264_A3107 immune inhibitor A YP_002884563.1 KEGG: bcr:BCAH187_A2317 hypothetical protein YP_002884564.1 KEGG: hypothetical protein YP_002884565.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bsu:BSU06320 hypothetical protein YP_002884567.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bha:BH1855 transcriptional regulator YP_002884568.1 PFAM: PfkB domain protein; KEGG: bce:BC0773 fructokinase YP_002884569.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vco:VC0395_0597 PTS system, sucrose-specific IIBC component YP_002884570.1 KEGG: bcb:BCB4264_A0809 beta-fructofuranosidase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32 YP_002884572.1 PFAM: alpha/beta hydrolase fold; KEGG: bsu:BSU03260 hypothetical protein YP_002884573.1 KEGG: bha:BH1815 hypothetical protein YP_002884575.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: bha:BH1033 hypothetical protein YP_002884576.1 PFAM: protein of unknown function DUF817; KEGG: bcb:BCB4264_A3475 hypothetical protein YP_002884579.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A0854 oligopeptide transport system permease OppB YP_002884580.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A2359 oligopeptide transport system permease OppC YP_002884581.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bca:BCE_0198 alcohol dehydrogenase, zinc-containing YP_002884583.1 KEGG: bce:BC4817 hypothetical protein YP_002884585.1 KEGG: bha:BH2142 hypothetical protein YP_002884586.1 PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; KEGG: bsu:BSU04280 hypothetical protein YP_002884587.1 KEGG: bat:BAS1896 short chain dehydrogenase YP_002884588.1 PFAM: beta-lactamase; KEGG: bca:BCE_3457 penicillin-binding protein YP_002884589.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcy:Bcer98_3712 MerR family transcriptional regulator YP_002884590.1 PFAM: Abortive infection protein; KEGG: bce:BC0636 CAAX amino protease YP_002884591.1 PFAM: NUDIX hydrolase; KEGG: bcb:BCB4264_A3779 MutT/NUDIX family protein YP_002884592.1 PFAM: alpha/beta hydrolase fold; KEGG: bce:BC1693 hydrolase YP_002884593.1 PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH0807 hypothetical protein YP_002884594.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bcb:BCB4264_A2554 hypothetical protein YP_002884595.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcb:BCB4264_A0896 major facilitator family transporter YP_002884596.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gme:Gmet_2157 two component AraC family transcriptional regulator YP_002884597.1 KEGG: bcz:BCZK4002 group-specific protein YP_002884599.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcb:BCB4264_A3209 helix-turn-helix domain protein YP_002884601.1 PFAM: sodium/hydrogen exchanger; KEGG: mxa:MXAN_5112 Na+/H+ antiporter YP_002884602.1 PFAM: protein of unknown function DUF1696; KEGG: vpa:VPA1559 hypothetical protein YP_002884603.1 KEGG: bcz:BCZK3169 group-specific protein YP_002884604.1 KEGG: bha:BH0573 hypothetical protein YP_002884605.1 KEGG: mmr:Mmar10_1735 hypothetical protein YP_002884606.1 PFAM: oxidoreductase domain protein; KEGG: bsu:BSU31170 hypothetical protein YP_002884607.1 PFAM: carboxymuconolactone decarboxylase; KEGG: hhe:HH1468 hypothetical protein YP_002884608.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU38310 hypothetical protein YP_002884609.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate YP_002884611.1 PFAM: Dynamin family protein; KEGG: bcr:BCAH187_A1741 hypothetical protein YP_002884612.1 KEGG: bcr:BCAH187_A2158 oxidoreductase YP_002884613.1 PFAM: protein of unknown function DUF939; KEGG: bha:BH0942 hypothetical protein YP_002884615.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mmr:Mmar10_2631 ABC transporter YP_002884618.1 PFAM: membrane-flanked domain; KEGG: bha:BH1720 hypothetical protein YP_002884619.1 PFAM: membrane-flanked domain; KEGG: bcz:BCZK0974 hypothetical protein YP_002884621.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bha:BH2030 hypothetical protein YP_002884622.1 KEGG: bcb:BCB4264_A2879 hypothetical protein YP_002884623.1 KEGG: bcr:BCAH187_A3523 hypothetical protein YP_002884624.1 KEGG: bat:BAS2821 hypothetical protein YP_002884625.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bcb:BCB4264_A3034 ATPase, AAA family YP_002884626.1 KEGG: ban:BA3037 hypothetical protein YP_002884629.1 PFAM: NUDIX hydrolase; KEGG: bcb:BCB4264_A4130 MutT/NUDIX family protein YP_002884630.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bsu:BSU40130 hypothetical protein YP_002884631.1 PFAM: glycoside hydrolase family 1; KEGG: bsu:BSU40110 6-phospho-beta-glucosidase YP_002884632.1 PFAM: beta-lactamase domain protein; KEGG: dol:Dole_1748 beta-lactamase domain-containing protein YP_002884633.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ngk:NGK_1972 ArsR-family transcriptional regulator YP_002884634.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH00908 short chain dehydrogenase YP_002884635.1 PFAM: Excalibur domain protein; KEGG: bsu:BSU10440 hypothetical protein YP_002884636.1 KEGG: bha:BH0641 hypothetical protein YP_002884637.1 KEGG: bat:BAS3126 hypothetical protein YP_002884638.1 PFAM: alpha/beta hydrolase fold; KEGG: rpe:RPE_4492 alpha/beta hydrolase fold YP_002884639.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpy:Bphyt_0979 short-chain dehydrogenase/reductase SDR YP_002884640.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU05150 hypothetical protein YP_002884641.1 PFAM: protein of unknown function DUF1294; KEGG: ret:RHE_CH01861 inner membrane protein YP_002884642.1 PFAM: 3D domain protein; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: bsu:BSU19210 hypothetical protein YP_002884643.1 PFAM: sodium/hydrogen exchanger; KEGG: bcr:BCAH187_A4667 sodium/hydrogen exchanger family protein YP_002884644.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: bsu:BSU36590 hypothetical protein YP_002884646.1 PFAM: protein of unknown function DUF58; KEGG: bca:BCE_3072 hypothetical protein YP_002884647.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: bcz:BCZK3171 magnesium chelatase, ChlI subunit; methanol dehydrogenase regulator YP_002884648.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU03370 hypothetical protein YP_002884649.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bsu:BSU03380 hypothetical protein YP_002884650.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU40740 hypothetical protein YP_002884651.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC3344 ribosomal-protein-alanine acetyltransferase YP_002884652.1 PFAM: beta-lactamase domain protein; KEGG: bcz:BCZK4731 metallo-beta-lactamase family protein YP_002884653.1 PFAM: NUDIX hydrolase; KEGG: bha:BH3089 mutator MutT protein YP_002884654.1 KEGG: bcy:Bcer98_0836 hypothetical protein YP_002884655.1 KEGG: bsu:BSU18100 DNA topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A YP_002884656.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002884657.1 PFAM: CoA-binding domain protein; KEGG: bha:BH2141 hypothetical protein YP_002884658.1 KEGG: dol:Dole_1377 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002884659.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: gme:Gmet_3042 tyrosine recombinase XerD subunit YP_002884662.1 PFAM: aminotransferase class I and II; KEGG: bha:BH3313 aminotransferase YP_002884663.1 PFAM: protein of unknown function DUF45; KEGG: rma:Rmag_0391 hypothetical protein YP_002884664.1 KEGG: bcz:pE33L466_0376 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_002884668.1 PFAM: protein of unknown function DUF302; KEGG: tcx:Tcr_2111 hypothetical protein YP_002884669.1 PFAM: arsenate reductase and related; KEGG: bsu:BSU11500 transcriptional regulator Spx YP_002884670.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcr:BCAH187_A0217 ABC transporter permease YP_002884671.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcb:BCB4264_A0198 ABC transporter ATP-binding protein YP_002884672.1 PFAM: NLPA lipoprotein; KEGG: bca:BCE_0197 ABC transporter substrate-binding protein YP_002884673.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: esa:ESA_00806 hypothetical protein YP_002884674.1 PFAM: aminotransferase class I and II; KEGG: bsu:BSU13580 transaminase YP_002884675.1 PFAM: protein of unknown function UPF0118; KEGG: bsu:BSU31800 hypothetical protein YP_002884676.1 PFAM: major facilitator superfamily MFS_1; KEGG: bca:BCE_0264 major facilitator family transporter YP_002884677.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: bcy:Bcer98_1737 amino acid/peptide transporter YP_002884678.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bha:BH3867 glutamine synthetase YP_002884679.1 PFAM: Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: eli:ELI_00360 hypothetical protein YP_002884680.1 KEGG: bcb:BCB4264_A3160 hypothetical protein YP_002884682.1 PFAM: RelA/SpoT domain protein; KEGG: ecz:ECS88_2201 hypothetical protein from phage origin YP_002884683.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcy:Bcer98_2780 MarR family transcriptional regulator YP_002884684.1 PFAM: peptidase C60 sortase A and B YP_002884685.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: bha:BH1282 hypothetical protein YP_002884686.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bcy:Bcer98_3887 glycerophosphodiester phosphodiesterase YP_002884687.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: bsu:BSU22080 hypothetical protein YP_002884688.1 PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bcz:BCZK0336 oxidoreductase, with Rieske iron-sulfur protein 2Fe-2S subunit YP_002884689.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bur:Bcep18194_A6236 penicillin-binding protein 6 YP_002884690.1 TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bcr:BCAH187_A3677 sodium/proline symporter family protein YP_002884693.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: bsu:BSU07900 hypothetical protein YP_002884694.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bcb:BCB4264_A5206 sodium/alanine symporter family protein YP_002884695.1 PFAM: oxidoreductase domain protein; KEGG: cak:Caul_2877 oxidoreductase domain-containing protein YP_002884697.1 PFAM: RNA methylase; KEGG: bha:BH1771 hypothetical protein YP_002884698.1 KEGG: bar:GBAA1006 hypothetical protein YP_002884699.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bha:BH0684 prepro-alkaline protease YP_002884702.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcz:BCZK2949 response regulator YP_002884703.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bca:BCE_3271 sensor histidine kinase YP_002884704.1 PFAM: protein of unknown function DUF214; KEGG: bca:BCE_3268 ABC transporter permease YP_002884705.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcz:BCZK2944 ABC transporter ATP-binding protein YP_002884707.1 KEGG: bcu:BCAH820_0300 alpha/beta hydrolase YP_002884708.1 PFAM: Abortive infection protein; KEGG: bcz:BCZK2732 CAAX amino protease YP_002884709.1 KEGG: bha:BH3436 hypothetical protein YP_002884711.1 PFAM: cobalt transport protein; KEGG: bsu:BSU13210 hypothetical protein YP_002884712.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU13220 hypothetical protein YP_002884713.1 KEGG: bsu:BSU13230 hypothetical protein YP_002884714.1 PFAM: YKOF domain protein; KEGG: bsu:BSU13240 hypothetical protein YP_002884715.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bca:BCE_1836 cobalamin synthesis protein YP_002884717.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bcb:BCB4264_A2566 regucalcin family protein YP_002884718.1 KEGG: mxa:MXAN_4322 thiopurine S-methyltransferase YP_002884721.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bsu:BSU15750 hypothetical protein YP_002884722.1 PFAM: Amidase; KEGG: bca:BCE_2143 amidase YP_002884724.1 KEGG: bcy:Bcer98_1443 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_002884725.1 KEGG: jan:Jann_4076 secreted protein YP_002884727.1 PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce5853 AMP-dependent synthetase and ligase YP_002884728.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C6897 short-chain dehydrogenase/reductase SDR YP_002884730.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bbt:BBta_6290 hypothetical protein YP_002884731.1 PFAM: sugar transport family protein; KEGG: bcy:Bcer98_3389 DMT superfamily L-rhamnose-proton symporter YP_002884732.1 PFAM: protein of unknown function DUF326; KEGG: bsu:BSU10600 hypothetical protein YP_002884733.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: DNA polymerase III epsilon subunit-like 3-5 exonuclease ; K02342 DNA polymerase III subunit epsilon YP_002884734.1 PFAM: glycosyl transferase family 2; KEGG: sus:Acid_0467 glycosyl transferase family protein YP_002884735.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bha:BH2867 cation antiporter (Na+/Ca2+) YP_002884736.1 KEGG: sat:SYN_03611 GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_002884737.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vha:VIBHAR_05160 oxidoreductase YP_002884738.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: bsu:BSU09270 transcription antiterminator YP_002884739.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbp:Sbal223_1009 GCN5-related N-acetyltransferase YP_002884740.1 PFAM: sodium/hydrogen exchanger; KEGG: bsu:BSU09850 hypothetical protein YP_002884741.1 PFAM: hypothetical protein; KEGG: par:Psyc_0191 alkaline phosphatase YP_002884742.1 KEGG: cps:CPS_2351 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_002884743.1 TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bcz:BCZK3347 sodium/proline symporter YP_002884744.1 KEGG: bce:BC3308 capsule biosynthesis protein CapA YP_002884745.1 KEGG: bcz:BCZK4375 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase YP_002884746.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: bsu:BSU29440 argininosuccinate lyase YP_002884747.1 PFAM: regulatory protein TetR; KEGG: ppg:PputGB1_1102 TetR family transcriptional regulator YP_002884748.1 KEGG: sse:Ssed_0588 hypothetical protein YP_002884749.1 KEGG: dol:Dole_1251 membrane protein YP_002884750.1 PFAM: BioY protein; KEGG: BioY protein precursor ; K03523 biotin biosynthesis protein BioY YP_002884752.1 PFAM: protein of unknown function DUF81; KEGG: bha:BH1459 hypothetical protein YP_002884753.1 PFAM: Protein of unknown function DUF829, eukaryotic; KEGG: bha:BH1308 hypothetical protein YP_002884754.1 PFAM: aminoglycoside 3-N-acetyltransferase; KEGG: bcb:BCB4264_A2939 aminoglycoside N3-acetyltransferase YP_002884755.1 PFAM: SMC domain protein; KEGG: vha:VIBHAR_05654 DNA repair exonuclease YP_002884756.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: bce:BC2295 exonuclease SbcD YP_002884757.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: bcb:BCB4264_A1961 ABC transporter permease/ATP-binding protein YP_002884758.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: bsu:BSU13960 hypothetical protein YP_002884759.1 KEGG: bsu:BSU04380 hypothetical protein YP_002884760.1 PFAM: protein of unknown function DUF975; KEGG: bcz:BCZK5002 hypothetical protein YP_002884761.1 PFAM: CutC family protein; KEGG: bph:Bphy_0141 CutC family protein YP_002884762.1 PFAM: regulatory protein DeoR; FaeA family protein; SMART: regulatory protein DeoR; KEGG: bcy:Bcer98_1053 DeoR family transcriptional regulator YP_002884763.1 PFAM: protein of unknown function DUF205; KEGG: bat:BAS3399 glycerol-3-phosphate acyltransferase PlsY YP_002884764.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bcb:BCB4264_A4622 D-alanyl-D-alanine carboxypeptidase family protein YP_002884765.1 PFAM: thioesterase superfamily protein; KEGG: bha:BH2288 hypothetical protein YP_002884766.1 PFAM: ATPase AAA; SMART: ATPase AAA; KEGG: bha:BH2289 stage V sporulation protein K YP_002884768.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: bcy:Bcer98_3772 choline/carnitine/betaine transporter YP_002884769.1 KEGG: bca:BCE_2094 hypothetical protein YP_002884770.1 Catalyzes the conversion of citrate to isocitrate YP_002884771.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: afw:Anae109_1704 peptide chain release factor 3 YP_002884772.1 KEGG: bha:BH2332 hypothetical protein YP_002884773.1 PFAM: protein of unknown function DUF485; KEGG: bca:BCE_1725 hypothetical protein YP_002884774.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bcz:BCZK1480 sodium/solute symporter family protein; sodium/proline symporter YP_002884775.1 PFAM: protein of unknown function DUF1453; KEGG: bcr:BCAH187_A2006 CcdC protein YP_002884776.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bcr:BCAH187_A3703 cytochrome c-type biogenesis protein CcdA YP_002884778.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: bha:BH2335 ABC transporter ATP-binding protein YP_002884779.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: bha:BH2336 ABC transporter ATP-binding protein YP_002884780.1 PFAM: protein of unknown function UPF0154; KEGG: bcy:Bcer98_2334 hypothetical protein YP_002884781.1 TIGRFAM: transketolase; PFAM: transketolase central region; transketolase domain protein; KEGG: bce:BC3682 transketolase YP_002884782.1 PFAM: protein of unknown function DUF896; KEGG: bha:BH2353 hypothetical protein YP_002884783.1 PFAM: Resolvase domain; KEGG: bsu:BSU17870 hypothetical protein YP_002884785.1 KEGG: bha:BH2356 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein YP_002884786.1 KEGG: bcz:BCZK4926 hypothetical protein YP_002884787.1 PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU05170 hypothetical protein YP_002884788.1 KEGG: bcy:Bcer98_2381 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_002884789.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcy:Bcer98_2382 MerR family transcriptional regulator YP_002884790.1 PFAM: Aluminium resistance family protein; KEGG: bcy:Bcer98_2383 aluminium resistance family protein YP_002884791.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: bcr:BCAH187_A3757 GTP-binding protein YP_002884792.1 KEGG: bcb:BCB4264_A3810 site-specific recombinase, phage integrase family YP_002884793.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_002884794.1 PFAM: phosphoglycerate mutase; KEGG: bcr:BCAH187_C0209 phosphoglycerate mutase family protein YP_002884795.1 PFAM: GCN5-related N-acetyltransferase; KEGG: abo:ABO_0079 acyltransferases YP_002884796.1 PFAM: major facilitator superfamily MFS_1; KEGG: bce:BC2055 macrolide-efflux protein YP_002884797.1 KEGG: shm:Shewmr7_2130 hypothetical protein YP_002884799.1 KEGG: bca:BCE_0192 hypothetical protein YP_002884801.1 KEGG: bsu:BSU17000 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: pyridoxal phosphate-dependent acyltransferase ; 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; Orn/Lys/Arg decarboxylase major region; aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_002884802.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism YP_002884803.1 PFAM: Stage V sporulation protein S; KEGG: bsu:BSU16980 required for dehydratation of the spore core and assembly of the coat (stage V sporulation) YP_002884804.1 PFAM: metallophosphoesterase; KEGG: bsu:BSU16970 hypothetical protein YP_002884805.1 KEGG: bha:BH2378 phosphodiesterase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KH type 1 domain protein; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_002884806.1 KEGG: bha:BH2383 recombinase A; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: ATPase AAA YP_002884807.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: bha:BH2385 competence damage-inducible protein A YP_002884808.1 KEGG: bcy:Bcer98_2433 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_002884809.1 SMART: helix-turn-helix domain protein; KEGG: bca:BCE_3817 hypothetical protein YP_002884810.1 PFAM: amino acid-binding ACT domain protein; KEGG: bcy:Bcer98_2435 amino acid-binding ACT domain-containing protein YP_002884811.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: bcz:BCZK3545 3-ketoacyl-(acyl-carrier-protein) reductase YP_002884812.1 PFAM: peptidase M16 domain protein; KEGG: bcr:BCAH187_A3834 zinc protease, insulinase family YP_002884813.1 PFAM: peptidase M16 domain protein; KEGG: bcz:BCZK3547 insulinase YP_002884814.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bat:BAS1388 ATP:cob(I)alamin adenosyltransferase YP_002884815.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bsu:BSU23110 two-component sensor histidine kinase YP_002884816.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH1580 two-component response regulator YP_002884817.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: bha:BH1579 cytochrome c biogenesis YP_002884818.1 PFAM: ResB family protein; KEGG: bcy:Bcer98_1198 ResB family protein YP_002884819.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bcy:Bcer98_1197 thiol-disulfide oxidoreductase YP_002884820.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bha:BH1576 pseudouridylate synthase YP_002884821.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: bcb:BCB4264_A4166 segregation and condensation protein B YP_002884822.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bcy:Bcer98_2757 segregation and condensation protein A YP_002884823.1 PFAM: protein of unknown function DUF309; KEGG: bha:BH1559 hypothetical protein YP_002884824.1 KEGG: bcy:Bcer98_2759 GCN5-related N-acetyltransferase YP_002884825.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bcy:Bcer98_2760 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_002884826.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like; KEGG: bsu:BSU39400 pyrimidine-nucleoside phosphorylase YP_002884827.1 TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; KEGG: bcb:BCB4264_A4196 purine nucleoside phosphorylase YP_002884828.1 KEGG: bcr:BCAH187_A4220 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: phosphopentomutase domain protein; metalloenzyme domain protein YP_002884829.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bcy:Bcer98_2788 site-specific tyrosine recombinase XerD YP_002884830.1 PFAM: ROK family protein; KEGG: bcr:BCAH187_A3376 ROK family protein YP_002884831.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmw:Mmwyl1_1174 major facilitator transporter YP_002884832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bat:BAS3152 glyoxylase family protein YP_002884833.1 PFAM: ferric-uptake regulator; KEGG: bha:BH1527 ferric uptake regulation protein YP_002884834.1 PFAM: NUDIX hydrolase; KEGG: bha:BH1524 hypothetical protein YP_002884835.1 PFAM: aldo/keto reductase; KEGG: bcr:BCAH187_A4229 LolS protein YP_002884836.1 PFAM: transcriptional regulator PadR family protein; KEGG: abo:ABO_1780 hypothetical protein YP_002884837.1 PFAM: Thioredoxin domain; KEGG: bcy:Bcer98_1701 thioredoxin domain-containing protein YP_002884839.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sal:Sala_2705 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002884840.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ftw:FTW_0776 CDP-alcohol phosphatidyltransferase family protein YP_002884841.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ABC transporter YP_002884842.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0305 binding-protein-dependent transport systems inner membrane component YP_002884843.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0305 binding-protein-dependent transport systems inner membrane component YP_002884844.1 KEGG: dde:Dde_0759 hypothetical protein YP_002884845.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bha:BH1506 oxidoreductase YP_002884846.1 PFAM: beta-lactamase domain protein; KEGG: bcz:BCZK3890 zinc metallohydrolase YP_002884847.1 PFAM: Aldehyde Dehydrogenase; KEGG: bcy:Bcer98_0684 aldehyde dehydrogenase YP_002884848.1 PFAM: response regulator receiver; CheW domain protein; SMART: response regulator receiver; CheW domain protein; KEGG: bha:BH2262 modulation of CheA activity in response to attractants (chemotaxis protein) YP_002884849.1 KEGG: tbd:Tbd_1268 Hpt sensor hybrid histidine kinase YP_002884850.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: bcb:BCB4264_A2040 magnesium transporter CorA family YP_002884851.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: bcb:BCB4264_A1035 response regulator YP_002884853.1 decatenates replicating daughter chromosomes YP_002884854.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gsu:GSU3390 hypothetical protein YP_002884855.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: bha:BH2163 hypothetical protein YP_002884856.1 PFAM: peptidase U32; KEGG: bha:BH1274 protease YP_002884857.1 PFAM: peptidase U32; KEGG: baa:BA_5051 peptidase family U32 YP_002884858.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aba:Acid345_1611 short-chain dehydrogenase/reductase SDR YP_002884860.1 KEGG: bcy:Bcer98_2113 hypothetical protein YP_002884861.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pha:PSHAa2022 cysteine ABC transporter ATP-binding protein YP_002884863.1 KEGG: bat:BAS3120 lipoprotein YP_002884865.1 TIGRFAM: ribonuclease Z; PFAM: beta-lactamase domain protein; KEGG: bsu:BSU23840 ribonuclease Z YP_002884867.1 KEGG: bcy:Bcer98_2841 peptidase T-like protein; TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M42 family protein YP_002884868.1 PFAM: protein of unknown function DUF939; KEGG: bsu:BSU23950 hypothetical protein YP_002884869.1 SMART: Lysozyme subfamily 2; KEGG: bcb:BCB4264_A0933 S-layer protein YP_002884870.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bsu:BSU14060 short chain dehydrogenase YP_002884871.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bcb:BCB4264_A2172 HD domain protein YP_002884872.1 PFAM: beta-lactamase domain protein; KEGG: bha:BH3178 metal-dependent hydrolase YP_002884873.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH1463 ABC transporter ATP-binding protein YP_002884874.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcy:Bcer98_2848 polar amino acid ABC transporter inner membrane subunit YP_002884875.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: bca:BCE_4225 amino acid ABC transporter amino acid-binding protein YP_002884876.1 PFAM: protein of unknown function DUF952; KEGG: bca:BCE_2838 hypothetical protein YP_002884877.1 PFAM: protein of unknown function DUF1094; KEGG: bcy:Bcer98_2850 hypothetical protein YP_002884878.1 KEGG: sbp:Sbal223_3821 hypothetical protein YP_002884879.1 PFAM: SpoOM family protein; KEGG: bce:BC2259 sporulation-control protein YP_002884882.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: bcy:Bcer98_2854 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_002884883.1 PFAM: transketolase central region; transketolase domain protein; KEGG: bcb:BCB4264_A4271 3-methyl-2-oxobutanoate dehydrogenase, subunit beta YP_002884884.1 PFAM: dehydrogenase E1 component; KEGG: bha:BH2763 branched-chain alpha-keto acid dehydrogenase E1 YP_002884885.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_002884886.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_002884887.1 PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase; KEGG: bsu:BSU24080 leucine dehydrogenase YP_002884888.1 catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate YP_002884889.1 KEGG: bsu:BSU24100 transcriptional regulator (sigma-L-dependent); TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; SMART: ATPase AAA; PAS domain containing protein YP_002884890.1 KEGG: bsu:BSU24110 hypothetical protein YP_002884891.1 PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver; KEGG: bcy:Bcer98_2865 response regulator receiver protein YP_002884892.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bsu:BSU24240 DNA repair and genetic recombination YP_002884893.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes YP_002884894.1 KEGG: bcb:BCB4264_A4286 hemolysin A; TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_002884895.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase domain protein; KEGG: bha:BH2779 1-deoxy-D-xylulose-5-phosphate synthase YP_002884896.1 PFAM: polyprenyl synthetase; KEGG: bsu:BSU24280 hypothetical protein YP_002884897.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: exonuclease VII small subunit; KEGG: bha:BH2782 exodeoxyribonuclease VII (small subunit) YP_002884898.1 KEGG: bha:BH2783 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_002884899.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_002884900.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: bsu:BSU24320 transcription antitermination protein NusB YP_002884901.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp; carbamoyl-phosphate synthetase large chain domain protein; KEGG: bha:BH2787 acetyl-CoA carboxylase biotin carboxylase subunit YP_002884902.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bcr:BCAH187_A4315 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002884903.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002884904.1 PFAM: peptidase M24; creatinase; KEGG: bcr:BCAH187_A4328 X-Pro dipeptidase YP_002884905.1 KEGG: rde:RD1_2651 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_002884906.1 PFAM: protein of unknown function DUF1385; KEGG: bsu:BSU24490 hypothetical protein YP_002884907.1 KEGG: bsu:BSU24500 hypothetical protein YP_002884908.1 KEGG: bcb:BCB4264_A4942 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002884909.1 involved in manganese homeostasis; activates the transcription of the mntABCD operon YP_002884910.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bcy:Bcer98_2900 rhodanese domain-containing protein YP_002884911.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_002884912.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein YP_002884913.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bcz:BCZK3981 glycine cleavage system aminomethyltransferase T YP_002884915.1 PFAM: shikimate kinase; KEGG: bat:BAS4137 shikimate kinase YP_002884919.1 KEGG: bha:BH2827 exogenous DNA-binding protein YP_002884920.1 PFAM: type II secretion system protein; KEGG: bcr:BCAH187_A4373 ComG operon protein 2 YP_002884921.1 PFAM: type II secretion system protein E; KEGG: bcr:BCAH187_A4374 ComG operon protein 1 YP_002884922.1 PFAM: arsenate reductase and related; KEGG: bsu:BSU24770 hypothetical protein YP_002884923.1 KEGG: bcy:Bcer98_2974 hypothetical protein YP_002884924.1 PFAM: beta-lactamase domain protein; KEGG: bcy:Bcer98_2989 beta-lactamase domain-containing protein YP_002884925.1 KEGG: bsu:BSU24800 hypothetical protein YP_002884926.1 PFAM: sulfatase; KEGG: bsu:BSU24840 hypothetical protein YP_002884927.1 TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: bcr:BCAH187_A4396 glucokinase YP_002884928.1 PFAM: protein of unknown function DUF910; KEGG: bcy:Bcer98_2992 hypothetical protein YP_002884929.1 PFAM: peptidase M42 family protein; KEGG: bcz:BCZK0799 glucanase; deblocking aminopeptidase YP_002884930.1 PFAM: Rhomboid family protein; KEGG: bha:BH1421 hypothetical protein YP_002884931.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: bcy:Bcer98_3505 L-lactate dehydrogenase YP_002884932.1 PFAM: protein of unknown function DUF92 transmembrane; KEGG: bha:BH1418 hypothetical protein YP_002884933.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: bca:BCE_4345 5-formyltetrahydrofolate cyclo-ligase family protein YP_002884934.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_002884935.1 PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: bha:BH1415 hypothetical protein YP_002884936.1 KEGG: bha:BH1414 hypothetical protein YP_002884937.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: bcb:BCB4264_A4384 phosphate transport system regulatory protein PhoU YP_002884938.1 KEGG: bha:BH2991 phosphate ABC transporter ATP-binding protein; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_002884939.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2992 phosphate ABC transporter (permease) YP_002884940.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2993 phosphate ABC transporter (permease) YP_002884941.1 TIGRFAM: phosphate binding protein; KEGG: bcy:Bcer98_3000 phosphate binding protein YP_002884942.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bce:BC4270 penicillin-binding protein YP_002884943.1 PFAM: manganese and iron superoxide dismutase; KEGG: ban:BA4499 superoxide dismutase, Mn YP_002884944.1 converts 1,4-alpha-D-glucans to maltodextrin YP_002884945.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: bcr:BCAH187_A0948 Na/Pi-cotransporter family protein YP_002884947.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: bha:BH3915 methyl-accepting chemotaxis protein YP_002884948.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_002884949.1 KEGG: bha:BH1399 hypothetical protein YP_002884950.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: mgm:Mmc1_3307 carbohydrate kinase, YjeF related protein YP_002884951.1 PFAM: ferric-uptake regulator; KEGG: bha:BH1396 FUR family transcriptional regulator YP_002884952.1 PFAM: ABC transporter; KEGG: bha:BH1395 ABC transporter (permease) YP_002884953.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH1394 ABC transporter ATP-binding protein YP_002884954.1 PFAM: Ppx/GppA phosphatase; KEGG: bha:BH1393 exopolyphosphatase YP_002884955.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_002884956.1 KEGG: vfm:VFMJ11_0505 XapX domain YP_002884958.1 KEGG: bcy:Bcer98_3012 endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2 YP_002884959.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: bha:BH1385 ATP-dependent RNA helicase YP_002884960.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bsu:BSU35960 ribose ABC transporter (ribose-binding protein) YP_002884961.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: histidine kinase YP_002884962.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_002884963.1 PFAM: protein of unknown function DUF34; KEGG: bat:BAS4191 hypothetical protein YP_002884964.1 PFAM: protein of unknown function DUF633; KEGG: bcz:BCZK4040 hypothetical protein YP_002884965.1 PFAM: cytochrome c class I; KEGG: bat:BAS4193 cytochrome c-550 YP_002884966.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; Bacterio-opsin activator HTH domain protein; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: bha:BH1376 RNA polymerase sigma factor RpoD YP_002884967.1 KEGG: bsu:BSU25210 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_002884968.1 PFAM: protein of unknown function DUF299; KEGG: bha:BH1373 hypothetical protein YP_002884969.1 PFAM: hypothetical protein; hypothetical protein; regulatory protein DeoR; SMART: hypothetical protein; KEGG: bsu:BSU25250 hypothetical protein YP_002884970.1 KEGG: bha:BH1371 glycyl-tRNA synthetase subunit beta; TIGRFAM: glycyl-tRNA synthetase, subunit beta YP_002884971.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_002884972.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA YP_002884973.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: bsu:BSU25290 GTP-binding protein Era YP_002884974.1 PFAM: diacylglycerol kinase; KEGG: bcy:Bcer98_3028 diacylglycerol kinase YP_002884975.1 PFAM: protein of unknown function UPF0054; KEGG: bcy:Bcer98_3029 metalloprotease YP_002884976.1 KEGG: bha:BH1362 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002884977.1 PFAM: PhoH family protein; KEGG: bha:BH1361 phosphate starvation-induced protein YP_002884978.1 KEGG: hypothetical protein YP_002884979.1 KEGG: bsu:BSU25380 hypothetical protein YP_002884980.1 KEGG: bha:BH1355 hypothetical protein YP_002884981.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_002884982.1 KEGG: bha:BH1352 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_002884983.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcb:BCB4264_A3667 RarD protein YP_002884984.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bcb:BCB4264_A4491 Cys/Met metabolism PLP-dependent enzyme YP_002884985.1 PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: bcb:BCB4264_A4492 O-acetylserine lyase YP_002884986.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 YP_002884987.1 KEGG: bsu:BSU27280 hypothetical protein YP_002884988.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; protein of unknown function DUF1034; KEGG: bha:BH0831 minor extracellular serine protease YP_002884989.1 PFAM: protein of unknown function DUF558; KEGG: bcy:Bcer98_3037 hypothetical protein YP_002884990.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_002884991.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_002884992.1 TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: bha:BH1346 class I heat-shock protein (chaperonin) YP_002884993.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor YP_002884994.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: bsu:BSU25490 heat-inducible transcription repressor YP_002884995.1 PFAM: protein of unknown function DUF1054; KEGG: bha:BH2637 hypothetical protein YP_002884996.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_002884997.1 PFAM: conserved hypothetical protein; KEGG: bcr:BCAH187_A3292 hypothetical protein YP_002884998.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bcy:Bcer98_2085 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_002884999.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_002885000.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002885001.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002885002.1 KEGG: bba:Bd0335 acetyltransferase YP_002885003.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: bcy:Bcer98_3050 DNA polymerase III subunit delta YP_002885004.1 KEGG: ban:BA4550 hypothetical protein YP_002885005.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: bcr:BCAH187_A4458 DNA internalization-related competence protein ComEC/Rec2 YP_002885006.1 KEGG: bsu:BSU25590 unspecific high-affinity DNA-binding protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1 YP_002885007.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bcy:Bcer98_0495 methyl-accepting chemotaxis sensory transducer YP_002885008.1 PFAM: basic membrane lipoprotein; KEGG: lch:Lcho_0561 basic membrane lipoprotein YP_002885010.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: bsu:BSU31010 hypothetical protein YP_002885011.1 PFAM: protein of unknown function DUF107; KEGG: bsu:BSU31020 hypothetical protein YP_002885012.1 KEGG: hypothetical protein YP_002885013.1 TIGRFAM: ribonuclease HIII; PFAM: ribonuclease HII/HIII; KEGG: bsu:BSU28620 ribonuclease HIII YP_002885014.1 PFAM: alpha/beta hydrolase fold; KEGG: aha:AHA_2564 dihydrolipoyllysine-residue acetyltransferase component of acetoincleaving system YP_002885015.1 KEGG: bce:BC4995 regulatory protein (PfoS/R) YP_002885016.1 TIGRFAM: phenylalanyl-tRNA synthetase, subunit beta; KEGG: bha:BH3110 phenylalanyl-tRNA synthetase subunit beta YP_002885017.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_002885018.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bcy:Bcer98_3250 tRNA/rRNA methyltransferase (SpoU) YP_002885019.1 PFAM: peptidase M42 family protein; peptidase M20; KEGG: bcz:BCZK4313 glucanase/deblocking aminopeptidase YP_002885020.1 PFAM: dUTPase; KEGG: bha:BH3133 hypothetical protein YP_002885022.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_002885023.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: bcb:BCB4264_A4682 ribosomal protein L35 YP_002885024.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: ban:BA4819 translation initiation factor IF-3 YP_002885026.1 KEGG: afw:Anae109_3915 hypothetical protein YP_002885027.1 PFAM: protein of unknown function DUF1002; KEGG: bha:BH1404 hypothetical protein YP_002885028.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_002885029.1 PFAM: Primosomal DnaI domain protein; KEGG: bha:BH3144 primosomal protein DnaI YP_002885030.1 PFAM: replication initiation and membrane attachment family protein; KEGG: bha:BH3145 chromosome replication initiation/membrane attachment protein YP_002885031.1 PFAM: ATP-cone domain protein; KEGG: bha:BH3146 transcriptional regulator NrdR YP_002885032.1 KEGG: bha:BH3147 hypothetical protein YP_002885033.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_002885034.1 NADP-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during gluconeogenesis YP_002885035.1 KEGG: bsu:BSU36680 hypothetical protein YP_002885036.1 KEGG: bcy:Bcer98_3269 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_002885037.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_002885038.1 KEGG: bsu:BSU29090 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2 YP_002885039.1 KEGG: bha:BH3156 two-component sensor histidine kinase involved in phosphate regulation; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_002885040.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH3157 two-component response regulator involved in phosphate regulation YP_002885041.1 Catalyzes the reversible oxidation of malate to oxaloacetate YP_002885042.1 Converts isocitrate to alpha ketoglutarate YP_002885043.1 KEGG: bha:BH3160 methylcitrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase YP_002885044.1 PFAM: protein of unknown function DUF441; KEGG: bsu:BSU29150 hypothetical protein YP_002885045.1 TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; PEP-utilising protein mobile region; Pyruvate kinase alpha/beta; KEGG: bcy:Bcer98_3282 pyruvate kinase YP_002885046.1 KEGG: bsu:BSU29190 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_002885047.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_002885048.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; KEGG: bcr:BCAH187_A4727 acetyl-CoA carboxylase, carboxyl transferase, subunit beta YP_002885049.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bcr:BCAH187_A4728 transcriptional regulator, GntR family YP_002885050.1 KEGG: bcy:Bcer98_3288 DNA polymerase III DnaE; TIGRFAM: DNA polymerase III, subunit alpha; PFAM: DNA polymerase III subunit alpha; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein YP_002885051.1 KEGG: bha:BH3172 hypothetical protein YP_002885052.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bcz:BCZK4348 DHH family phosphoesterase YP_002885053.1 KEGG: bcy:Bcer98_3292 hypothetical protein YP_002885054.1 PFAM: DRTGG domain protein; hypothetical protein; thioesterase superfamily protein; regulatory protein GntR HTH; SMART: hypothetical protein; KEGG: bha:BH3175 hypothetical protein YP_002885055.1 PFAM: peptidase M24; creatinase; KEGG: bsu:BSU13860 hypothetical protein YP_002885056.1 PFAM: metallophosphoesterase; KEGG: pol:Bpro_0201 metallophosphoesterase YP_002885057.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_002885058.1 PFAM: UspA domain protein; KEGG: bcz:BCZK4370 universal stress protein YP_002885059.1 PFAM: 3D domain protein; KEGG: bcy:Bcer98_3773 3D domain-containing protein YP_002885060.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_002885061.1 KEGG: bsu:BSU29480 hypothetical protein YP_002885062.1 PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bcy:Bcer98_3312 redoxin domain-containing protein YP_002885063.1 catalyzes the phosphorylation of NAD to NADP YP_002885064.1 PFAM: amidohydrolase; KEGG: bcz:BCZK4387 metal-dependent hydrolase YP_002885065.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation YP_002885066.1 PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: bcz:BCZK4397 hypothetical protein YP_002885067.1 KEGG: bha:BH3209 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_002885068.1 PFAM: RelA/SpoT domain protein; KEGG: bsu:BSU38480 hypothetical protein YP_002885069.1 KEGG: ban:BA4911 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_002885070.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bha:BH3229 penicillin-binding protein 1A YP_002885071.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_002885072.1 KEGG: bsu:BSU29690 acetoin dehydrogenase YP_002885073.1 PFAM: hypothetical protein; amino acid-binding ACT domain protein; SMART: hypothetical protein; KEGG: bcb:BCB4264_A4777 acetoin utilization protein AcuB YP_002885074.1 PFAM: histone deacetylase superfamily; KEGG: bcy:Bcer98_3338 histone deacetylase superfamily protein YP_002885075.1 KEGG: bcb:BCB4264_A4790 catabolite control protein A; TIGRFAM: catabolite control protein A; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_002885076.1 catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate YP_002885077.1 KEGG: bha:BH3244 general stress protein YP_002885078.1 PFAM: protein of unknown function DUF948; KEGG: bcz:BCZK4431 hypothetical protein YP_002885079.1 PFAM: peptidase M29 aminopeptidase II; KEGG: bha:BH3246 aminopeptidase YP_002885080.1 PFAM: Ferritin Dps family protein; KEGG: bcy:Bcer98_1520 ferritin Dps family protein YP_002885081.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_002885082.1 KEGG: hypothetical protein YP_002885083.1 PFAM: t-RNA-binding domain protein; KEGG: bha:BH3251 phenylalanyl-tRNA synthetase (subunit beta) YP_002885084.1 PFAM: protein of unknown function DUF1444; KEGG: bha:BH3252 hypothetical protein YP_002885085.1 PFAM: Thioredoxin domain; KEGG: bcy:Bcer98_3355 thioredoxin domain-containing protein YP_002885087.1 PFAM: phosphotransferase system EIIC; KEGG: bha:BH3254 hypothetical protein YP_002885088.1 PFAM: peptidase M42 family protein; KEGG: bcy:Bcer98_3359 glutamyl aminopeptidase YP_002885089.1 KEGG: bca:BCE_4839 hypothetical protein YP_002885090.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase YP_002885091.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: msu:MS1607 dihydroxyacetone kinase ADP-binding subunit YP_002885092.1 TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: bra:BRADO4613 dihydroxyacetone kinase phosphotransfer protein (DhaH/M-like) YP_002885094.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_002885096.1 PFAM: aminoglycoside phosphotransferase; KEGG: bcb:BCB4264_A4813 aminoglycoside phosphotransferase family protein YP_002885097.1 KEGG: bcz:BCZK2463 pullulanase; TIGRFAM: pullulanase, type I; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain YP_002885098.1 KEGG: bha:BH3267 hypothetical protein YP_002885099.1 TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: bsu:BSU29960 hypothetical protein YP_002885100.1 PFAM: major facilitator superfamily MFS_1; proton/sugar symporter LacY; KEGG: bsu:BSU38340 hypothetical protein YP_002885101.1 TIGRFAM: dipeptidase; PFAM: peptidase M20; KEGG: bcy:Bcer98_3367 dipeptidase PepV YP_002885102.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bsu:BSU30020 hypothetical protein YP_002885103.1 KEGG: bca:BCE_1821 hypothetical protein YP_002885104.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bha:BH3273 16S pseudouridylate synthase YP_002885105.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: bha:BH3277 spore cortex protein YP_002885106.1 PFAM: HI0933 family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: bha:BH3279 hypothetical protein YP_002885107.1 KEGG: mex:Mext_0956 hypothetical protein YP_002885108.1 KEGG: bcb:BCB4264_A4848 hypothetical protein YP_002885109.1 KEGG: hypothetical protein YP_002885110.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_002885111.1 PFAM: rhodopsin; KEGG: pub:SAR11_0625 bacteriorhodopsin YP_002885112.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcz:BCZK4491 permease; multidrug resistance protein YP_002885113.1 KEGG: bha:BH3284 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002885114.1 PFAM: rRNA methylase; KEGG: bcy:Bcer98_3423 rRNA methylase YP_002885116.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pap:PSPA7_0333 acetyltransferase YP_002885117.1 KEGG: similar to protein O-D-mannosyltransferase; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase YP_002885118.1 KEGG: bha:BH3300 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_002885119.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_002885120.1 KEGG: bha:BH3306 hypothetical protein YP_002885121.1 TIGRFAM: nucleoside triphosphatase YtkD; PFAM: NUDIX hydrolase; KEGG: bcy:Bcer98_3459 nucleoside triphosphatase YtkD YP_002885122.1 PFAM: phosphoglucose isomerase (PGI); KEGG: bcz:BCZK4630 glucose-6-phosphate isomerase YP_002885123.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bsu:BSU31370 hypothetical protein YP_002885124.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: bha:BH2165 hypothetical protein YP_002885125.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: bsu:BSU31390 general stress protein 13 YP_002885126.1 KEGG: bha:BH2620 hypothetical protein YP_002885127.1 PFAM: aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bcy:Bcer98_3512 hypothetical protein YP_002885128.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bha:BH3351 AsnC/Lrp family transcriptional regulator YP_002885129.1 PFAM: glycosyl transferase family 2; KEGG: bsu:BSU37980 hypothetical protein YP_002885130.1 PFAM: Scaffold protein Nfu/NifU; KEGG: bsu:BSU21880 hypothetical protein YP_002885132.1 Catalyzes the rate-limiting step in dNTP synthesis YP_002885133.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: bsu:BSU14150 flavodoxin YP_002885134.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE YP_002885135.1 PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; SMART: cell wall hydrolase/autolysin; SH3 domain protein; KEGG: bha:BH3665 N-acetylmuramoyl-L-alanine amidase (major autolysin) YP_002885136.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bha:BH1679 hypothetical protein YP_002885137.1 TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: bha:BH0463 hypothetical protein YP_002885138.1 KEGG: vsp:VS_0638 hypothetical protein YP_002885139.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bat:BAS4792 leucyl aminopeptidase YP_002885140.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: bcr:BCAH187_A4179 phosphoenolpyruvate-protein phosphotransferase YP_002885141.1 PFAM: aldo/keto reductase; KEGG: bsu:BSU29050 hypothetical protein YP_002885142.1 TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; KEGG: bca:BCE_4117 PTS system, glucose-specific IIABC component YP_002885143.1 KEGG: bce:BC4050 PTS system, glucose-specific IIABC component; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein YP_002885144.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bsu:BSU13880 BglG family transcriptional antiterminator YP_002885145.1 KEGG: bha:BH3405 hypothetical protein YP_002885146.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bcy:Bcer98_3538 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002885147.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bsu:BSU32110 hypothetical protein YP_002885148.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bcb:BCB4264_A5572 hypothetical protein YP_002885150.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bsu:BSU32160 hypothetical protein YP_002885151.1 KEGG: bcb:BCB4264_A1537 hypothetical protein YP_002885152.1 PFAM: protein of unknown function DUF925; KEGG: bca:BCE_2248 hypothetical protein YP_002885153.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: vha:VIBHAR_03378 hypothetical protein YP_002885154.1 PFAM: protein of unknown function DUF1450; KEGG: bsu:BSU32190 hypothetical protein YP_002885155.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bha:BH3415 NADH dehydrogenase YP_002885156.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: bsu:BSU38400 extracellular serine protease YP_002885157.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: bsu:BSU10380 haem-based aerotactic transducer YP_002885158.1 KEGG: baa:BA_0057 hypothetical protein YP_002885159.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: bsu:BSU32220 hypothetical protein YP_002885160.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bsu:BSU32290 hypothetical protein YP_002885161.1 PFAM: protein of unknown function DUF86; KEGG: bha:BH3430 hypothetical protein YP_002885162.1 similar to GlpX type II fructose-1,6-bisphosphatase YP_002885163.1 PFAM: protein of unknown function DUF975; KEGG: bcb:BCB4264_A5423 integral membrane protein YP_002885165.1 PFAM: protein of unknown function DUF1027; KEGG: bha:BH3433 hypothetical protein YP_002885166.1 PFAM: metallophosphoesterase; KEGG: bha:BH3453 hypothetical protein YP_002885167.1 PFAM: protein of unknown function DUF72; KEGG: bcb:BCB4264_A1514 hypothetical protein YP_002885168.1 PFAM: major facilitator superfamily MFS_1; Protein of unknown function DUF895, eukaryotic; KEGG: bha:BH1775 multidrug-efflux transporter YP_002885169.1 TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein; KEGG: bcr:BCAH187_A1603 branched-chain amino acid transport system II carrier protein YP_002885170.1 PFAM: acylphosphatase; KEGG: pmu:PM0396 hypothetical protein YP_002885171.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bsu:BSU07750 hypothetical protein YP_002885172.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: bce:BC4870 L-lactate dehydrogenase YP_002885173.1 KEGG: sbn:Sbal195_4264 hypothetical protein YP_002885174.1 PFAM: YCII-related; KEGG: mpt:Mpe_A0137 hypothetical protein YP_002885175.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: xca:xccb100_3976 conserved sigma factor-like protein YP_002885176.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: bsu:BSU32670 hypothetical protein YP_002885177.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: bcb:BCB4264_A5122 iron-sulfur cluster assembly scaffold SufA YP_002885178.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bcr:BCAH187_A5121 cysteine desulfurase SufS YP_002885179.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: bcb:BCB4264_A5124 FeS assembly protein SufD YP_002885180.1 KEGG: bat:BAS4851 ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: ATPase AAA YP_002885181.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcz:BCZK3324 multidrug resistance protein B; transporter permease YP_002885182.1 PFAM: NLPA lipoprotein; KEGG: bce:BC4985 ABC transporter substrate-binding protein YP_002885183.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcy:Bcer98_3581 binding-protein-dependent transport systems inner membrane component YP_002885184.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH3481 ABC transporter ATP-binding protein YP_002885185.1 KEGG: bcr:BCAH187_A5131 thioredoxin YP_002885186.1 KEGG: bcy:Bcer98_3590 hypothetical protein YP_002885187.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: bsu:BSU32800 glycine cleavage system protein H YP_002885188.1 PFAM: arsenate reductase and related; KEGG: bha:BH3485 arsenate reductase YP_002885189.1 KEGG: vsp:VS_II0840 hypothetical protein YP_002885190.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bha:BH3486 butyryl-CoA dehydrogenase YP_002885191.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_002885192.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bca:BCE_5144 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein YP_002885193.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bha:BH1511 short chain dehydrogenase/reductase family oxidoreductase YP_002885197.1 PFAM: proline dehydrogenase; KEGG: bcb:BCB4264_A5153 proline dehydrogenase family protein YP_002885198.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bca:BCE_2271 hemolysin III YP_002885199.1 PFAM: carbon starvation protein CstA; KEGG: bat:BAS1687 carbon starvation protein A YP_002885200.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: bsu:BSU07840 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein YP_002885201.1 KEGG: bcy:Bcer98_0710 hypothetical protein YP_002885202.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; KEGG: bcy:Bcer98_0711 preprotein translocase subunit SecA YP_002885203.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: bsu:BSU21500 UV-damage repair protein YP_002885204.1 PFAM: YolD-like protein; KEGG: bsu:BSU21510 hypothetical protein YP_002885205.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: bcz:pE33L466_0441 sulfate transporter YP_002885206.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH0179 ABC transporter ATP-binding protein YP_002885207.1 KEGG: cja:CJA_1546 nitric oxide reductase qNor type YP_002885208.1 KEGG: bar:GBAA1077 hypothetical protein YP_002885210.1 PFAM: transcriptional regulator PadR family protein; KEGG: bca:BCE_5114 PadR family transcriptional regulator YP_002885211.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bba:Bd3629 hypothetical protein YP_002885212.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: ect:ECIAI39_4900 retron-type reverse transcriptase YP_002885213.1 KEGG: bxe:Bxe_B2054 hypothetical protein YP_002885215.1 KEGG: ban:BA3242 hypothetical protein YP_002885216.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ban:BA2523 DNA-binding protein YP_002885217.1 KEGG: bsu:BSU11910 hypothetical protein YP_002885218.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0161 GCN5-related N-acetyltransferase YP_002885222.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pcr:Pcryo_0932 HNH nuclease YP_002885223.1 KEGG: hypothetical protein YP_002885224.1 KEGG: bcb:BCB4264_A4992 hypothetical protein YP_002885225.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_002885226.1 KEGG: ban:BA5334 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Cold shock protein YP_002885227.1 KEGG: bcy:Bcer98_3674 carboxylesterase YP_002885228.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: bha:BH3555 preprotein translocase subunit SecG YP_002885229.1 PFAM: protein of unknown function DUF161; KEGG: ban:BA3266 hypothetical protein YP_002885230.1 PFAM: glycosyl transferase group 1; KEGG: ban:BA5518 glycosyl transferase, group 1 family protein YP_002885231.1 PFAM: glycosyl transferase group 1; KEGG: bcz:BCZK4973 glycosyl transferase, group 1; capsular polysaccharide biosynthesis protein YP_002885232.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bsu:BSU35670 UTP-glucose-1-phosphate uridylyltransferase YP_002885233.1 PFAM: aminoglycoside phosphotransferase; KEGG: bce:BC1129 trifolitoxin immunity protein YP_002885234.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002885235.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002885236.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_002885237.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_002885238.1 KEGG: nma:NMA0246 glyceraldehyde 3-phosphate dehydrogenase C; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_002885239.1 PFAM: sugar-binding domain protein; KEGG: bsu:BSU33950 transcriptional regulator YP_002885240.1 PFAM: glutaredoxin 2; KEGG: bha:BH3562 hypothetical protein YP_002885241.1 PFAM: sigma-54 DNA-binding domain protein; KEGG: dno:DNO_0532 RNA polymerase sigma-54 factor YP_002885242.1 KEGG: bha:BH3564 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_002885243.1 PFAM: regulatory protein MerR; transcription activator effector binding; SMART: regulatory protein MerR; KEGG: pfl:PFL_5189 MerR family transcriptional regulator YP_002885245.1 KEGG: bcz:BCZK3064 hypothetical protein YP_002885246.1 PFAM: CopG domain protein DNA-binding domain protein YP_002885247.1 PFAM: protein of unknown function DUF199; KEGG: bha:BH3567 hypothetical protein YP_002885248.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: bsu:BSU34760 hypothetical protein YP_002885249.1 PFAM: conserved hypothetical protein; KEGG: bsu:BSU34770 hypothetical protein YP_002885250.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bcb:BCB4264_A5277 thioredoxin-disulfide reductase YP_002885251.1 KEGG: bcy:Bcer98_3702 TPR repeat-containing protein YP_002885252.1 KEGG: bha:BH3586 acetyltransferase YP_002885253.1 KEGG: bcb:BCB4264_A5280 hydrolase, haloacid dehalogenase-like family; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_002885254.1 TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: bcz:BCZK4855 prolipoprotein diacylglyceryl transferase YP_002885255.1 TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain protein; KEGG: bcy:Bcer98_3706 HPr kinase/phosphorylase YP_002885257.1 KEGG: bha:BH3593 hypothetical protein YP_002885258.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; KEGG: bsu:BSU35160 excinuclease ABC subunit A YP_002885259.1 KEGG: bcy:Bcer98_3710 excinuclease ABC subunit B; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_002885260.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bcb:BCB4264_A1065 glycerol uptake facilitator protein YP_002885261.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: bcr:BCAH187_A1195 glycerol kinase YP_002885262.1 KEGG: bha:BH3598 hypothetical protein YP_002885263.1 KEGG: bcy:Bcer98_3721 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; peptidoglycan-binding domain 1 protein; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_002885264.1 PFAM: peptidase M23; KEGG: bha:BH3600 cell wall-binding protein YP_002885265.1 PFAM: protein of unknown function DUF214; KEGG: bha:BH3601 cell-division protein YP_002885266.1 KEGG: bsu:BSU35260 cell-division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: ATPase AAA YP_002885267.1 PFAM: cytochrome c class I; KEGG: bsu:BSU35270 cytochrome c551 YP_002885268.1 PFAM: protein of unknown function DUF161; KEGG: bha:BH3604 hypothetical protein YP_002885269.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: bsu:BSU35290 peptide chain release factor 2 YP_002885270.1 KEGG: bcy:Bcer98_3726 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; helicase domain protein; SMART: helicase domain protein YP_002885271.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: bca:BCE_5296 ribosomal subunit interface protein YP_002885272.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bcy:Bcer98_3497 cold-shock DNA-binding domain-containing protein YP_002885273.1 PFAM: ComK family protein; KEGG: bcb:BCB4264_A1189 competence transcription factor YP_002885274.1 KEGG: bha:BH1474 hypothetical protein YP_002885275.1 KEGG: bha:BH1475 flagellar biosynthesis (FlhS-related protein) YP_002885276.1 KEGG: pca:Pcar_1111 flagellar protein FliS YP_002885277.1 PFAM: flagellin domain protein; KEGG: bsu:BSU35360 flagellin YP_002885278.1 PFAM: protein of unknown function DUF327; KEGG: bha:BH1478 hypothetical protein YP_002885280.1 PFAM: protein of unknown function DUF1572; KEGG: aba:Acid345_4703 protein of unknown function DUF1572 YP_002885281.1 KEGG: bha:BH0940 hypothetical protein YP_002885282.1 PFAM: SCP-like extracellular; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bar:GBAA1306 hypothetical protein YP_002885283.1 KEGG: bsu:BSU21010 hypothetical protein YP_002885287.1 TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: bsu:BSU35330 flagellar protein FliS YP_002885288.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: bsu:BSU35340 flagellar capping protein YP_002885289.1 PFAM: flagellar protein FlaG protein; KEGG: bsu:BSU35350 flagellar protein FlaG YP_002885290.1 KEGG: yen:YE2520 flagellin lysine-N-methylase YP_002885291.1 PFAM: flagellin domain protein; KEGG: bha:BH3616 flagellin YP_002885292.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: bcy:Bcer98_0495 methyl-accepting chemotaxis sensory transducer YP_002885293.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcr:BCAH187_A2180 acetyltransferase, GNAT family YP_002885296.1 KEGG: bcb:BCB4264_A2941 hypothetical protein YP_002885297.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: hne:HNE_0562 antibiotic biosynthesis monooxygenase domain-containing protein YP_002885298.1 PFAM: protein of unknown function DUF161; KEGG: bcy:Bcer98_2134 hypothetical protein YP_002885299.1 PFAM: protein of unknown function DUF161; KEGG: bcy:Bcer98_3010 hypothetical protein YP_002885300.1 KEGG: bcz:pE33L54_0055 hypothetical protein YP_002885301.1 KEGG: spe:Spro_1997 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002885302.1 TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; KEGG: bha:BH3617 carbon storage regulator YP_002885303.1 PFAM: protein of unknown function DUF180; KEGG: bsu:BSU35380 flagellar assembly protein FliW YP_002885304.1 KEGG: bsu:BSU35390 hypothetical protein YP_002885305.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: bsu:BSU35400 flagellar hook-associated protein FlgL YP_002885306.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_002885307.1 PFAM: FlgN family protein; KEGG: bsu:BSU35420 hypothetical protein YP_002885308.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: dvm:DvMF_2585 anti-sigma-28 factor, FlgM YP_002885309.1 KEGG: bha:BH3624 flagellar protein YP_002885310.1 KEGG: bcz:BCZK4886 ComF operon protein 3 YP_002885311.1 PFAM: helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: bha:BH3626 late competence protein YP_002885312.1 KEGG: bca:BCE_0700 trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002885313.1 TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: bca:BCE_0699 PTS system, trehalose-specific IIBC component YP_002885314.1 KEGG: bca:BCE_0698 trehalose operon transcriptional repressor; TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_002885315.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bsu:BSU35480 hypothetical protein YP_002885316.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bsu:BSU35490 two-component response regulator YP_002885317.1 KEGG: bha:BH3629 two-component sensor histidine kinase involved in degradative enzyme; PFAM: Sensor DegS domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein YP_002885318.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: bha:BH3630 hypothetical protein YP_002885319.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bha:BH3647 transcriptional regulator YP_002885320.1 PFAM: glycosyl transferase family 4; KEGG: bcb:BCB4264_A5322 glycosyl transferase, group 4 family protein YP_002885322.1 TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bsu:BSU34550 beta-phosphoglucomutase YP_002885323.1 PFAM: protein of unknown function DUF322; KEGG: bha:BH2786 hypothetical protein YP_002885324.1 PFAM: acyltransferase 3; KEGG: bsu:BSU13520 hypothetical protein YP_002885326.1 PFAM: phospholipase/carboxylesterase; KEGG: bcr:BCAH187_A3675 phospholipase/carboxylesterase family protein YP_002885327.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH1166 ABC transporter ATP-binding protein YP_002885328.1 PFAM: ABC transporter; KEGG: bsu:BSU09900 hypothetical protein YP_002885330.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: dal:Dalk_1374 transcriptional regulator, XRE family YP_002885331.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: bcr:BCAH187_A5498 PTS system, glucose-specific IIA component YP_002885332.1 TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bca:BCE_1452 oligoendopeptidase F YP_002885333.1 KEGG: hypothetical protein YP_002885334.1 PFAM: conserved hypothetical protein; KEGG: bcj:BCAS0106 hypothetical protein YP_002885335.1 PFAM: aldo/keto reductase; KEGG: aldehyde reductase; oxidoreductase YP_002885336.1 KEGG: bsu:BSU12270 hypothetical protein YP_002885337.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A5212 hypothetical protein YP_002885338.1 PFAM: major facilitator superfamily MFS_1; KEGG: bat:BAS4932 major facilitator family transporter YP_002885339.1 PFAM: Luciferase-like monooxygenase; KEGG: bcz:BCZK3086 luciferase family protein (alkanal monooxygenase, FMN-linked) YP_002885340.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: bha:BH2710 inosine-5'-monophosphate dehydrogenase YP_002885341.1 PFAM: alpha/beta hydrolase fold; KEGG: bsu:BSU10900 hypothetical protein YP_002885342.1 KEGG: hypothetical protein YP_002885344.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: dal:Dalk_1616 hypothetical protein YP_002885346.1 PFAM: protein of unknown function DUF541; KEGG: azc:AZC_1461 hypothetical protein YP_002885348.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pol:Bpro_3390 RNA polymerase sigma factor YP_002885350.1 KEGG: bcb:BCB4264_A3013 hypothetical protein YP_002885351.1 PFAM: transcriptional regulator PadR family protein; KEGG: bcz:BCZK2734 PadR family transcriptional regulator YP_002885352.1 PFAM: glycoside hydrolase family 5; KEGG: vei:Veis_0943 glycoside hydrolase, family 5 YP_002885353.1 PFAM: dihydrouridine synthase DuS; KEGG: bcu:BCAH820_0366 hypothetical protein YP_002885354.1 PFAM: regulatory protein TetR; KEGG: glo:Glov_3431 transcriptional regulator, TetR family YP_002885355.1 KEGG: dol:Dole_1251 membrane protein YP_002885356.1 KEGG: bsu:BSU03140 ATP-binding membrane protein YP_002885359.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vvu:VV1_2445 acetyltransferase YP_002885360.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: gsu:GSU0562 hypothetical protein YP_002885361.1 PFAM: protein of unknown function DUF262; KEGG: ppr:PBPRA1799 hypothetical protein YP_002885362.1 PFAM: protein of unknown function DUF262; KEGG: pcr:Pcryo_0950 hypothetical protein YP_002885363.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function Met10; (Uracil-5)-methyltransferase; KEGG: bha:BH0687 RNA methyltransferase YP_002885364.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: bsu:BSU06720 lipid kinase YP_002885365.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB/Yqey domain protein; GatB central domain protein; KEGG: bcy:Bcer98_0299 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_002885366.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002885367.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: bha:BH0665 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_002885368.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN3624 methyl-accepting chemotaxis transducer YP_002885369.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bha:BH4033 amino acid transporter YP_002885370.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bca:BCE_0591 bacterioferritin comigratory protein YP_002885372.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bcy:Bcer98_0289 1-pyrroline-5-carboxylate dehydrogenase YP_002885373.1 PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein; KEGG: sbn:Sbal195_3239 metal dependent phosphohydrolase YP_002885374.1 KEGG: bha:BH1557 riboflavin synthase subunit beta; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_002885375.1 KEGG: bcy:Bcer98_2810 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_002885376.1 KEGG: bha:BH1555 riboflavin synthase subunit alpha; TIGRFAM: riboflavin synthase, subunit alpha; PFAM: Lumazine-binding protein YP_002885377.1 KEGG: bha:BH1554 riboflavin specific deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_002885378.1 phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_002885380.1 KEGG: bha:BH3036 two-component sensor histidine kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002885381.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bcy:Bcer98_3733 DegV family protein YP_002885382.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mpt:Mpe_A2067 peptide ABC transporter ATP-binding protein YP_002885383.1 PFAM: protein of unknown function DUF214; KEGG: lpc:LPC_0234 hypothetical protein YP_002885384.1 KEGG: bca:BCE_1203 hypothetical protein YP_002885385.1 PFAM: low temperature requirement A; KEGG: bce:BC3180 low temperature requirement protein A YP_002885386.1 KEGG: eci:UTI89_C4721 hypothetical protein YP_002885387.1 KEGG: afw:Anae109_0547 hypothetical protein YP_002885388.1 PFAM: protein of unknown function DUF1271; KEGG: mlo:mlr4660 hypothetical protein YP_002885389.1 PFAM: glutaredoxin 2; KEGG: bsu:BSU05510 hypothetical protein YP_002885390.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bcb:BCB4264_A5316 DegV family protein YP_002885391.1 PFAM: RDD domain containing protein; KEGG: bsu:BSU03390 hypothetical protein YP_002885392.1 PFAM: Nitric oxide synthase NOS; KEGG: bcy:Bcer98_3961 nitric-oxide synthase YP_002885393.1 KEGG: sbp:Sbal223_3950 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_002885394.1 KEGG: bcr:BCAH187_A2786 pullulanase, type I; TIGRFAM: pullulanase, type I; PFAM: alpha amylase catalytic region; pullanase-associated protein; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain YP_002885395.1 KEGG: ban:BA5664 GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002885396.1 KEGG: bha:BH0323 hypothetical protein YP_002885397.1 PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gme:Gmet_3484 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002885398.1 TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: bha:BH2999 arsenic efflux pump YP_002885399.1 PFAM: HesB/YadR/YfhF-family protein; KEGG: bca:BCE_A0155 HesB-like domain-containing protein YP_002885400.1 KEGG: bca:BCE_A0156 arsenite-translocating ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: ATPase AAA YP_002885401.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: bca:BCE_A0157 arsenical resistence operon repressor ArsD YP_002885402.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bcy:Bcer98_1602 regulatory protein ArsR YP_002885403.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: bsu:BSU01580 hypothetical protein YP_002885404.1 PFAM: UspA domain protein; KEGG: bha:BH0415 hypothetical protein YP_002885405.1 KEGG: bsu:BSU38670 hypothetical protein YP_002885406.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH0290 ABC transporter ATP-binding protein YP_002885407.1 KEGG: bsu:BSU38650 hypothetical protein YP_002885408.1 PFAM: cell wall binding repeat-containing protein; KEGG: bcr:BCAH187_C0151 S-layer domain ribonuclease YP_002885409.1 PFAM: conserved hypothetical protein; KEGG: bsu:BSU01650 hypothetical protein YP_002885410.1 PFAM: SCP-like extracellular; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bcy:Bcer98_1016 hypothetical protein YP_002885412.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcb:BCB4264_A1804 ABC transporter ATP-binding protein YP_002885413.1 KEGG: bcz:BCZK1609 multidrug ABC transporter permease YP_002885414.1 PFAM: ABC transporter; KEGG: bce:BC1736 ABC transporter permease YP_002885415.1 KEGG: ppf:Pput_3642 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region; PAS domain containing protein YP_002885416.1 PFAM: transcriptional regulator PadR family protein; KEGG: bha:BH0575 hypothetical protein YP_002885417.1 TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bha:BH0574 chromate transporter YP_002885418.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: bcr:BCAH187_A2110 1-phosphofructokinase YP_002885419.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway YP_002885420.1 catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate YP_002885421.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: ribose/galactose isomerase; KEGG: bha:BH3767 ribose-5-phosphate isomerase B YP_002885422.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: pmr:PMI2929 glycerol-3-phosphate regulon repressor YP_002885423.1 catalyzes the formation of 6-phospho-galactose from a 6-phospho-beta-galactoside YP_002885424.1 KEGG: vvy:VV2900 phosphotransferase system cellobiose-specific component IIC; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit YP_002885425.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: bsu:BSU38570 phosphotransferase system (PTS) lichenan-specific enzyme IIA component YP_002885426.1 PFAM: acyltransferase 3; KEGG: bsu:BSU27140 hypothetical protein YP_002885427.1 PFAM: protein of unknown function DUF218; KEGG: bat:BAS2124 hypothetical protein YP_002885429.1 KEGG: GH16383 gene product from transcript GH16383-RA YP_002885430.1 PFAM: glycosyl transferase group 1; KEGG: aha:AHA_4231 WavL YP_002885431.1 KEGG: bcu:BCAH820_0976 hypothetical protein YP_002885432.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: bcy:Bcer98_0717 membrane bound O-acyl transferase MBOAT family protein YP_002885434.1 KEGG: bcr:BCAH187_A5365 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_002885435.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcz:BCZK4965 teichoic acids export protein ATP-binding subunit YP_002885436.1 PFAM: ABC transporter; KEGG: bat:BAS5119 techoic acid ABC transporter efflux permease YP_002885437.1 KEGG: bat:BAS5120 UDP-N-acetyl-D-mannosamine dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_002885438.1 PFAM: glycosyl transferase group 1; KEGG: bat:BAS5122 glycosyl transferase, group 1 family protein YP_002885439.1 KEGG: bcz:BCZK4970 bifunctional hypothetical protein/glycosyltransferase YP_002885440.1 KEGG: hypothetical protein YP_002885441.1 PFAM: glycosyl transferase family 2; KEGG: bcz:BCZK4970 bifunctional hypothetical protein/glycosyltransferase YP_002885442.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: bsu:BSU07840 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein YP_002885445.1 PFAM: Heparinase II/III family protein; KEGG: bcz:BCZK4968 hypothetical protein YP_002885446.1 PFAM: Heparinase II/III family protein; KEGG: bcz:BCZK4968 hypothetical protein YP_002885449.1 PFAM: SH3 type 3 domain protein; protein of unknown function DUF1058; SMART: SH3 domain protein; KEGG: bat:BAS1765 M24/M37 family peptidase YP_002885450.1 KEGG: bha:BH2080 cell wall-associated protease precursor YP_002885451.1 PFAM: sigma-70 region 2 domain protein YP_002885452.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pap:PSPA7_1381 site-specific tyrosine recombinase XerD YP_002885454.1 PFAM: Heparinase II/III family protein; KEGG: bcz:BCZK4968 hypothetical protein YP_002885455.1 KEGG: hypothetical protein YP_002885456.1 PFAM: Cna B domain protein; Collagen binding domain protein; KEGG: bha:BH2014 hypothetical protein YP_002885457.1 PFAM: transglutaminase domain protein; Protein of unknown function DUF553; SMART: transglutaminase domain protein; KEGG: dal:Dalk_2886 transglutaminase domain protein YP_002885462.1 KEGG: bcz:BCZK0819 hypothetical protein YP_002885463.1 KEGG: bcz:BCZK0818 hypothetical protein YP_002885464.1 KEGG: pcr:Pcryo_0920 ATP-binding protein YP_002885466.1 KEGG: pha:PSHAa2988 hypothetical protein YP_002885467.1 KEGG: pha:PSHAa2989 hypothetical protein YP_002885472.1 KEGG: bha:BH2080 cell wall-associated protease precursor YP_002885474.1 PFAM: peptidase domain protein; KEGG: bha:BH2080 cell wall-associated protease precursor YP_002885475.1 PFAM: UvrD/REP helicase; DNA topoisomerase type IA zn finger domain protein; KEGG: sbm:Shew185_3966 UvrD/REP helicase YP_002885476.1 KEGG: hypothetical protein similar to erythrocyte membrane-associated giant protein antigen 332 YP_002885478.1 KEGG: gdi:GDI3508 autotransporter protein YP_002885479.1 KEGG: pen:PSEEN0746 hypothetical protein YP_002885480.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: bcz:pE33L466_0042 transposase YP_002885481.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bha:BH2080 cell wall-associated protease precursor YP_002885483.1 KEGG: bha:BH2080 cell wall-associated protease precursor YP_002885484.1 KEGG: scl:sce7452 hypothetical protein YP_002885485.1 PFAM: NLP/P60 protein; KEGG: bcb:BCB4264_A5357 cell wall hydrolase YP_002885486.1 KEGG: bha:BH4034 hypothetical protein YP_002885487.1 KEGG: bha:BH4034 hypothetical protein YP_002885489.1 KEGG: bcb:BCB4264_A1291 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_002885490.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: dol:Dole_1568 glutamine amidotransferase of anthranilate synthase YP_002885491.1 KEGG: abo:ABO_0145 ferredoxin--NADP+ reductase YP_002885492.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bce:BC5103 ferric anguibactin transport ATP-binding protein YP_002885493.1 PFAM: transport system permease; KEGG: bcb:BCB4264_A5232 iron compound ABC transporter permease YP_002885494.1 PFAM: transport system permease; KEGG: bca:BCE_5225 iron compound ABC transporter permease YP_002885495.1 PFAM: periplasmic binding protein; KEGG: bcb:BCB4264_A5234 iron compound ABC transporter iron compound-binding protein YP_002885498.1 KEGG: bce:BC2106 hypothetical protein YP_002885499.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B0953 TetR family transcriptional regulator YP_002885500.1 PFAM: small multidrug resistance protein; KEGG: bsu:BSU17290 multidrug resistance protein YP_002885501.1 PFAM: small multidrug resistance protein; KEGG: sgl:SG1898 hypothetical protein YP_002885502.1 KEGG: rle:RL4072 hypothetical protein YP_002885503.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sml:Smlt1085 short-chain deydrogenase/reductase YP_002885504.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: bcz:pE33L466_0042 transposase YP_002885505.1 KEGG: bpy:Bphyt_4284 short-chain dehydrogenase/reductase SDR YP_002885507.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcr:BCAH187_A3673 glyoxalase family protein YP_002885508.1 PFAM: conserved hypothetical protein; KEGG: bsu:BSU12240 hypothetical protein YP_002885509.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU12250 hypothetical protein YP_002885510.1 KEGG: bsu:BSU39220 hypothetical protein YP_002885511.1 KEGG: seg:SG1047 hypothetical protein YP_002885512.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bha:BH0914 GntR family transcriptional regulator YP_002885513.1 PFAM: glycoside hydrolase family 4; KEGG: bha:BH0912 6-phospho-beta-glucosidase YP_002885514.1 KEGG: bat:BAS5058 PTS system, cellobiose-specific IIC component; TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_002885515.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: bsu:BSU38570 phosphotransferase system (PTS) lichenan-specific enzyme IIA component YP_002885516.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: bha:BH0909 PTS system, cellobiose-specific enzyme II, B component (EIIA-cell) YP_002885517.1 PFAM: YdjC family protein; KEGG: bcr:BCAH187_A5372 hypothetical protein YP_002885518.1 KEGG: bcb:BCB4264_A2871 hypothetical protein YP_002885519.1 PFAM: cation efflux protein; KEGG: bha:BH0427 hypothetical protein YP_002885520.1 KEGG: bsu:BSU19150 hypothetical protein YP_002885521.1 KEGG: shl:Shal_3322 sodium/glutamate symporter YP_002885522.1 PFAM: protein of unknown function DUF161; KEGG: bha:BH3604 hypothetical protein YP_002885523.1 TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M42 family protein; KEGG: bsu:BSU23910 hypothetical protein YP_002885524.1 PFAM: protein of unknown function UPF0118; KEGG: bsu:BSU31800 hypothetical protein YP_002885525.1 KEGG: bcz:BCZK4659 cell surface protein YP_002885529.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bca:BCE_0922 short chain dehydrogenase/reductase family oxidoreductase YP_002885530.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bha:BH0876 methyl-accepting chemotaxis protein YP_002885531.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: psp:PSPPH_0804 methyl-accepting chemotaxis protein YP_002885532.1 KEGG: bha:BH2080 cell wall-associated protease precursor YP_002885535.1 KEGG: bcr:BCAH187_A4158 hypothetical protein YP_002885538.1 PFAM: conserved hypothetical protein; KEGG: bcb:BCB4264_A5072 lipoprotein YP_002885539.1 PFAM: protein of unknown function DUF214; KEGG: bcb:BCB4264_A4955 efflux ABC transporter permease YP_002885540.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcr:BCAH187_A4964 bacitracin export ATP-binding protein BceA YP_002885541.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcz:BCZK0906 response regulator YP_002885542.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcz:BCZK0907 sensor histidine kinase YP_002885543.1 KEGG: mag:amb1214 signal transduction protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_002885544.1 PFAM: NLP/P60 protein; peptidoglycan-binding LysM; protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: peptidoglycan-binding LysM; SH3 domain protein; KEGG: bcz:BCZK4930 N-acetylmuramoyl-L-alanine amidase; enterotoxin YP_002885545.1 KEGG: bcr:BCAH187_A5477 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_002885547.1 KEGG: bsu:BSU36230 hypothetical protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase YP_002885549.1 PFAM: protein of unknown function DUF916 cell surface KEGG: bcz:BCZK0769 cell surface protein YP_002885550.1 KEGG: bcb:BCB4264_A4889 cell surface protein YP_002885551.1 KEGG: FAP159; flagellar associated protein YP_002885552.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA1737 acetyltransferase YP_002885553.1 KEGG: eca:ECA1736 hypothetical protein YP_002885554.1 KEGG: eca:ECA1735 hypothetical protein YP_002885555.1 PFAM: WbqC-like family protein; KEGG: bch:Bcen2424_0233 hypothetical protein YP_002885556.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_2348 glycosyl transferase family protein YP_002885557.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; KEGG: gsu:GSU2366 dTDP-glucose 4,6-dehydratase YP_002885558.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: abo:ABO_0913 glucose-1-phosphate thymidylyltransferase YP_002885559.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: psp:PSPPH_3420 aminotransferase YP_002885560.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_2348 glycosyl transferase family protein YP_002885561.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gur:Gura_1693 NAD-dependent epimerase/dehydratase YP_002885562.1 KEGG: maq:Maqu_2595 carbamoyl-phosphate-synthetase YP_002885563.1 PFAM: glycosyl transferase group 1; KEGG: bha:BH3380 glycosyl transferase (lipopolysaccharide biosynthesis) YP_002885564.1 PFAM: polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: bcr:BCAH187_A5444 FlmA YP_002885565.1 PFAM: sugar transferase; KEGG: ftm:FTM_1497 galactosyl transferase YP_002885566.1 KEGG: bcr:BCAH187_A5442 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_002885567.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cha:CHAB381_0962 virulence factor MviN family protein YP_002885568.1 KEGG: bsu:BSU34310 hypothetical protein YP_002885569.1 PFAM: glycosyl transferase family 2; KEGG: rcm:A1E_03790 minor teichoic acids biosynthesis protein GgaB (GgaB) YP_002885570.1 PFAM: glycosyl transferase group 1; KEGG: bcr:BCAH187_A5441 glycosyltransferase YP_002885571.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: bha:BH0595 PTS system, beta-glucoside-specific enzyme II, ABC component YP_002885572.1 PFAM: glycoside hydrolase family 1; KEGG: bcz:BCZK0860 beta-glucosidase YP_002885573.1 PFAM: Aldose 1-epimerase; KEGG: bha:BH2755 aldose 1-epimerase YP_002885574.1 PFAM: PHP domain protein; KEGG: bsu:BSU36240 hypothetical protein YP_002885575.1 KEGG: cko:CKO_03578 hypothetical protein YP_002885576.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bsu:BSU35650 membrane-bound transcriptional regulator LytR YP_002885577.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: bsu:BSU07900 hypothetical protein YP_002885578.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_002885580.1 KEGG: cbd:CBUD_0810 BRAMP YP_002885581.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: bsu:BSU38860 UDP-glucose 4-epimerase YP_002885582.1 KEGG: bca:BCE_5587 hypothetical protein YP_002885583.1 PFAM: glycosyl transferase group 1; KEGG: bca:BCE_5586 glycosyl transferase, group 1 family protein YP_002885584.1 KEGG: bcr:BCAH187_A5633 hypothetical protein YP_002885585.1 KEGG: bca:BCE_5584 hypothetical protein YP_002885586.1 KEGG: bcr:BCAH187_A5631 hypothetical protein YP_002885587.1 PFAM: TM1410 hypothetical-related protein; KEGG: bcr:BCAH187_A5630 hypothetical protein YP_002885588.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: bsu:BSU06590 hypothetical protein YP_002885590.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bha:BH2675 RpiR transcriptional regulator YP_002885591.1 KEGG: bja:bll5864 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_002885592.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcr:BCAH187_A0278 major facilitator family transporter YP_002885593.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_002885594.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: csa:Csal_0925 gluconate transporter YP_002885595.1 TIGRFAM: gluconate kinase; PFAM: carbohydrate kinase FGGY; KEGG: bcz:BCZK3078 gluconate kinase (2-dehydro-3-deoxygluconokinase) YP_002885597.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_01751 acetyltransferase YP_002885598.1 PFAM: polysaccharide deacetylase; KEGG: bha:BH3902 endo-1,4-beta-xylanase YP_002885599.1 KEGG: bcz:BCZK5111 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002885600.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: bsu:BSU37220 hypothetical protein YP_002885601.1 PFAM: hypothetical protein; KEGG: bcb:BCB4264_A0684 hypothetical protein YP_002885602.1 PFAM: peptidase M23; KEGG: smt:Smal_0711 peptidase M23 YP_002885603.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bcn:Bcen_1590 cytidine deaminase, homotetrameric YP_002885604.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mmw:Mmwyl1_3639 ABC transporter YP_002885605.1 PFAM: transport system permease; KEGG: oan:Oant_2825 transport system permease YP_002885606.1 PFAM: transport system permease; KEGG: oan:Oant_2826 transport system permease YP_002885607.1 PFAM: periplasmic binding protein; KEGG: mmw:Mmwyl1_3636 periplasmic binding protein YP_002885608.1 PFAM: Negative transcriptional regulator; KEGG: bca:BCE_3276 protease synthase and sporulation negative regulatory protein PAI 2 YP_002885609.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_5186 haloacid dehalogenase, type II YP_002885610.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU32150 transcriptional regulator YP_002885611.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU40710 hypothetical protein YP_002885612.1 KEGG: pzu:PHZ_c2906 hypothetical protein YP_002885613.1 PFAM: Domain of unknown function DUF1801; KEGG: aba:Acid345_2420 hypothetical protein YP_002885614.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bcy:Bcer98_0508 methyl-accepting chemotaxis sensory transducer YP_002885615.1 PFAM: hypothetical protein; KEGG: bsu:BSU28970 hypothetical protein YP_002885616.1 PFAM: polysaccharide deacetylase; KEGG: bha:BH3902 endo-1,4-beta-xylanase YP_002885617.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: bha:BH3915 methyl-accepting chemotaxis protein YP_002885618.1 PFAM: NmrA family protein; short-chain dehydrogenase/reductase SDR; TrkA-N domain protein; KEGG: bha:BH0305 hypothetical protein YP_002885619.1 PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: bcy:Bcer98_0627 osmosensitive K channel His kinase sensor YP_002885620.1 PFAM: K transporting ATPase KdpC subunit; KEGG: mlo:mll3129 potassium-transporting atpase C chain, KdpC YP_002885621.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_002885622.1 KEGG: bcy:Bcer98_0624 potassium-transporting ATPase A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit YP_002885623.1 TIGRFAM: K+-transporting ATPase, F subunit YP_002885625.1 PFAM: hypothetical protein; KEGG: par:Psyc_0191 alkaline phosphatase YP_002885626.1 PFAM: Integral membrane protein TerC; KEGG: gsu:GSU0855 TerC family membrane protein YP_002885628.1 PFAM: peptidase M23; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bca:BCE_A0203 enterotoxin YP_002885629.1 PFAM: protein of unknown function DUF305; KEGG: eli:ELI_04560 hypothetical protein YP_002885630.1 KEGG: bha:BH2571 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase YP_002885631.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcb:BCB4264_A0623 DNA-binding response regulator YP_002885632.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bcb:BCB4264_A0686 sensor histidine kinase YP_002885633.1 KEGG: bca:BCE_A0197 lipoprotein YP_002885634.1 TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: afr:AFE_2779 copper-translocating P-type ATPase YP_002885635.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: xau:Xaut_2898 bilirubin oxidase YP_002885636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_1221 PAS/PAC sensor signal transduction histidine kinase YP_002885638.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bcy:Bcer98_2716 alpha amylase catalytic region YP_002885639.1 TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bsu:BSU34550 beta-phosphoglucomutase YP_002885640.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3688 sugar transport system (permease) YP_002885641.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3689 sugar transport system (permease) YP_002885642.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3690 sugar transport system (sugar-binding protein) YP_002885643.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bha:BH3692 transcriptional regulator YP_002885644.1 KEGG: bcy:Bcer98_3004 hypothetical protein YP_002885645.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: ent:Ent638_2158 kojibiose phosphorylase YP_002885646.1 KEGG: pfl:PFL_3237 sucrose-6-phosphate hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32 YP_002885647.1 KEGG: bsu:BSU09120 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; 5TM Receptors of the LytS-YhcK type transmembrane region; SMART: GGDEF domain containing protein YP_002885648.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bcb:BCB4264_A4279 glycerophosphoryl diester phosphodiesterase family protein YP_002885649.1 PFAM: extracellular solute-binding protein family 1; KEGG: bcr:BCAH187_A0700 glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein YP_002885650.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1078 glycerol-3-phosphate ABC transporter (permease) YP_002885651.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1077 glycerol-3-phosphate ABC transporter (permease) YP_002885652.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: bha:BH1076 sugar ABC transporter ATP-binding protein YP_002885653.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: bcu:BCAH820_0621 glycerol uptake operon antiterminator regulatory protein YP_002885654.1 PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; KEGG: eli:ELI_08725 hypothetical protein YP_002885655.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: aba:Acid345_1114 UbiE/COQ5 methyltransferase YP_002885656.1 KEGG: dal:Dalk_0942 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein YP_002885657.1 PFAM: N-acetylmannosamine-6-phosphate epimerase; KEGG: ecq:ECED1_5001 N-acetylmannosamine-6-phosphate 2-epimerase (ManNAc-6-P epimerase) YP_002885658.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: hip:CGSHiEE_02570 N-acetylmannosamine kinase YP_002885659.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: ent:Ent638_3231 PTS system, glucose-like IIB subunint YP_002885660.1 KEGG: eli:ELI_11625 hypothetical protein YP_002885661.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; Choloylglycine hydrolase; KEGG: bcr:BCAH187_A2531 hypothetical protein YP_002885662.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bsu:BSU33690 hypothetical protein YP_002885664.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_002885665.1 KEGG: bha:BH3736 hypothetical protein YP_002885666.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: ban:BA4924 large conductance mechanosensitive channel protein YP_002885667.1 KEGG: pfl:PFL_3378 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase YP_002885668.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: bha:BH3737 flagellar hook-basal body protein YP_002885669.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bha:BH3738 flagellar basal-body rod protein YP_002885670.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gur:Gura_1221 PAS/PAC sensor signal transduction histidine kinase YP_002885671.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: ent:Ent638_2919 signal transduction histidine kinase, LytS YP_002885672.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bha:BH2016 hypothetical protein YP_002885673.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bce:BC0195 3-ketoacyl-(acyl-carrier-protein) reductase YP_002885675.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcr:BCAH187_C0214 glyoxalase family protein YP_002885676.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; KEGG: bcy:Bcer98_3798 cell shape determining protein MreB YP_002885677.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: bsu:BSU36760 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002885678.1 PFAM: conserved hypothetical protein; KEGG: bsu:BSU36780 hypothetical protein YP_002885679.1 PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein; KEGG: dal:Dalk_3068 diguanylate phosphodiesterase YP_002885680.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_002885681.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002885682.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_002885683.1 KEGG: bsu:BSU36830 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_002885684.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: bha:BH3757 F0F1 ATP synthase subunit delta YP_002885685.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: bcy:Bcer98_3829 F0F1 ATP synthase subunit B YP_002885686.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: bcb:BCB4264_A5432 ATP synthase F0, C subunit YP_002885687.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: bsu:BSU36870 F0F1 ATP synthase subunit A YP_002885688.1 PFAM: ATP synthase I; KEGG: bcb:BCB4264_A5434 ATP synthase protein I YP_002885690.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_002885692.1 KEGG: clumping factor YP_002885693.1 PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH0373 two-component sensor histidine kinase YP_002885694.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH0372 two-component response regulator YP_002885696.1 KEGG: hypothetical protein YP_002885697.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002885698.1 PFAM: esterase; KEGG: vsp:VS_II0160 hypothetical protein YP_002885699.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dal:Dalk_3877 transcriptional regulator, MarR family YP_002885700.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: met:M446_3512 short-chain dehydrogenase/reductase SDR YP_002885701.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bsu:BSU35990 hypothetical protein YP_002885702.1 PFAM: helix-turn-helix HxlR type; KEGG: bha:BH0737 cinnamoyl ester hydrolase YP_002885703.1 PFAM: ThiJ/PfpI domain protein; KEGG: mlo:mlr4512 hypothetical protein YP_002885704.1 KEGG: bcz:pE33L466_0370 low temperature requirement protein A YP_002885705.1 PFAM: conserved hypothetical protein; KEGG: bsu:BSU36910 hypothetical protein YP_002885706.1 KEGG: bha:BH3767 ribose-5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase YP_002885707.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: bcb:BCB4264_A5441 low molecular weight phosphotyrosine protein phosphatase family protein YP_002885708.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: bcr:BCAH187_A5503 SUA5/YciO/YrdC/YwlC family protein YP_002885709.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: bcb:BCB4264_A5451 protein-(glutamine-N5) methyltransferase, release factor-specific YP_002885710.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: bcy:Bcer98_3850 peptide chain release factor 1 YP_002885711.1 catalyzes the formation of thymidine 5'-phosphate from thymidine YP_002885712.1 PFAM: sodium/hydrogen exchanger; KEGG: bar:GBAA4781 sodium/hydrogen exchanger family protein YP_002885713.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_002885714.1 KEGG: bcb:BCB4264_A5455 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: Cold shock protein; ATPase AAA YP_002885715.1 PFAM: NLP/P60 protein; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: dno:DNO_1067 hypothetical protein YP_002885716.1 PFAM: ABC transporter; KEGG: aeh:Mlg_2716 ABC transporter YP_002885717.1 KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_002885718.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_002885719.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: bcb:BCB4264_A5457 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 YP_002885720.1 KEGG: bce:BC0665 translaldolase; TIGRFAM: transaldolase; PFAM: transaldolase YP_002885721.1 KEGG: bcy:Bcer98_3856 fructose-bisphosphate aldolase; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_002885722.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bsu:BSU37130 two-component response regulator YP_002885723.1 PFAM: conserved hypothetical protein; KEGG: bce:BC4932 hypothetical protein YP_002885724.1 PFAM: FAD dependent oxidoreductase; KEGG: bsu:BSU09300 glycerol-3-phosphate dehydrogenase YP_002885725.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bsu:BSU24210 hypothetical protein YP_002885726.1 PFAM: polysaccharide deacetylase; KEGG: bsu:BSU12100 hypothetical protein YP_002885727.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A2079 acetyltransferase YP_002885728.1 PFAM: hypothetical protein; KEGG: sfu:Sfum_2268 hypothetical protein YP_002885729.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002885730.1 PFAM: DNA-directed RNA polymerase delta subunit; KEGG: bha:BH3793 DNA-directed RNA polymerase subunit delta YP_002885731.1 KEGG: similar to laccase 1 YP_002885732.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: bha:BH0505 methyl-accepting chemotaxis protein YP_002885733.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bha:BH3802 iron-sulphur-binding reductase YP_002885734.1 KEGG: psa:PST_2084 hypothetical protein YP_002885735.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_3542 acetyltransferase YP_002885737.1 PFAM: Domain of unknown function DUF1934; KEGG: bsu:BSU37340 hypothetical protein YP_002885738.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS3219 acetyltransferase YP_002885739.1 PFAM: peptidase S51 dipeptidase E; KEGG: hypothetical protein ; K05995 dipeptidase E YP_002885740.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bca:BCE_0481 glycosyl hydrolase family protein YP_002885741.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU06920 hypothetical protein YP_002885742.1 PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bsu:BSU36600 MerR family transcriptional regulator YP_002885743.1 KEGG: sun:SUN_1525 hypothetical protein YP_002885745.1 PFAM: glycosyl transferase group 1; KEGG: dar:Daro_1276 glycosyl transferase, group 1 YP_002885746.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: sat:SYN_01113 UDP-N-acetyl-D-galactosamine 6-dehydrogenase YP_002885747.1 KEGG: aba:Acid345_3795 CapK protein YP_002885748.1 KEGG: vch:VC0924 CapK protein YP_002885749.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: sat:SYN_01112 UDP-N-acetylglucosamine 4-epimerase YP_002885750.1 PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: bca:BCE_5395 caspsular polysaccharide biosynthesis protein YP_002885751.1 KEGG: sun:SUN_1216 hypothetical protein YP_002885752.1 PFAM: protein of unknown function DUF897; KEGG: bha:BH3869 hypothetical protein YP_002885753.1 KEGG: bha:BH3870 hypothetical protein YP_002885754.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bsu:BSU37490 agmatinase YP_002885755.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_002885756.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: hha:Hhal_0058 diguanylate phosphodiesterase YP_002885757.1 PFAM: Chloride channel core; KEGG: bcb:BCB4264_A5531 voltage-gated chloride channel family protein YP_002885759.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: bcz:BCZK0536 cardiolipin synthetase YP_002885760.1 PFAM: hypothetical protein; KEGG: bcb:BCB4264_A0639 hypothetical protein YP_002885761.1 PFAM: sodium:dicarboxylate symporter; KEGG: bha:BH3820 H(+)/sodium-glutamate symporter YP_002885762.1 KEGG: bcy:Bcer98_3897 hypothetical protein YP_002885763.1 PFAM: protein of unknown function DUF871; KEGG: bcb:BCB4264_A0878 hypothetical protein YP_002885764.1 PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: bcy:Bcer98_0671 PTS system, sucrose-specific IIBC component YP_002885765.1 TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS); KEGG: bha:BH3575 N-acetylmuramic acid-6-phosphate etherase YP_002885766.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xac:XAC2939 acetyltransferase YP_002885767.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bcy:Bcer98_0668 RpiR family transcriptional regulator YP_002885768.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: tbd:Tbd_0447 neutral zinc metallopeptidase YP_002885769.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: bcb:BCB4264_A5500 4-oxalocrotonate tautomerase YP_002885770.1 PFAM: Na+/Picotransporter; KEGG: bid:Bind_2510 Na+/H+ antiporter YP_002885771.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bha:BH3818 hypothetical protein YP_002885772.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: bcy:Bcer98_3907 biotin/lipoate A/B protein ligase YP_002885773.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bsu:BSU11110 hypothetical protein YP_002885774.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bsu:BSU01660 hypothetical protein YP_002885775.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002885776.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: bha:BH2812 lipoate protein ligase YP_002885777.1 PFAM: fatty acid desaturase; KEGG: bcb:BCB4264_A3000 fatty acid desaturase YP_002885778.1 converts 1,4-alpha-D-glucans to maltodextrin YP_002885779.1 KEGG: bcz:BCZK2733 hypothetical protein YP_002885780.1 PFAM: transcriptional regulator PadR family protein; KEGG: bcy:Bcer98_2035 PadR-like family transcriptional regulator YP_002885781.1 KEGG: mca:MCA0827 hypothetical protein YP_002885782.1 PFAM: Ion transport 2 domain protein ; TrkA-N domain protein; KEGG: bha:BH3340 potassium channel protein YP_002885783.1 KEGG: bcy:Bcer98_1311 hypothetical protein YP_002885784.1 KEGG: bar:GBAA1601 lipoprotein YP_002885785.1 PFAM: glutathionylspermidine synthase; KEGG: bcy:Bcer98_1313 glutathionylspermidine synthase YP_002885786.1 PFAM: protein of unknown function DUF350; KEGG: bcr:BCAH187_A1751 hypothetical protein YP_002885788.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; Oxidoreductase FAD-binding domain protein; KEGG: bha:BH1058 nitric oxide dioxygenase YP_002885789.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bsu:BSU09380 hypothetical protein YP_002885790.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH2175 hypothetical protein YP_002885791.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcb:BCB4264_A0717 DNA-binding protein YP_002885792.1 KEGG: bce:BC0681 hypothetical protein YP_002885793.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: wsu:WS1674 Na-driven multidrug efflux protein YP_002885794.1 KEGG: dps:DP1233 bifunctional glutamate--cysteine ligase/glutathione synthetase; TIGRFAM: glutamate/cysteine ligase, /amino acid ligase; PFAM: glutamate--cysteine ligase YP_002885795.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH0694 ArsR family transcriptional regulator YP_002885796.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bha:BH0695 hypothetical protein YP_002885797.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ilo:IL2539 threonine aldolase YP_002885798.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: smd:Smed_2447 alcohol dehydrogenase zinc-binding domain protein YP_002885799.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: saz:Sama_0275 glyoxalase/bleomycin resistance protein/dioxygenase YP_002885800.1 PFAM: helix-turn-helix HxlR type; KEGG: transcriptional regulator protein YP_002885801.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpi:Rpic_3001 glyoxalase/bleomycin resistance protein/dioxygenase YP_002885802.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcr:BCAH187_A1733 acetyltransferase, GNAT family YP_002885803.1 PFAM: inner-membrane translocator; KEGG: bcr:BCAH187_A0907 methylthioribose transport system permease YP_002885804.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: esa:ESA_00807 hypothetical protein YP_002885805.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bcr:BCAH187_A0909 methylthioribose-binding protein YP_002885806.1 KEGG: bcz:BCZK3789 methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_002885807.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway YP_002885808.1 converts 2,3-diketo-5-methylthiopentyl-1-phosphate into 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate; involved in methionine salvage YP_002885809.1 converts 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate to 1,2-dihydroxy-3-keto-5-methylthiopentene; involved in methionine salvage YP_002885810.1 converts methylthioribulose-1-phosphate into 2,3-diketo-5-methylthiopentyl-1-phosphate; involved in methionine salvage YP_002885811.1 PFAM: Acireductone dioxygenase ARD; Cupin 2 conserved barrel domain protein; KEGG: bcr:BCAH187_A4170 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase YP_002885812.1 PFAM: Integral membrane protein TerC; KEGG: bcb:BCB4264_A1360 membrane protein, TerC family YP_002885813.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis YP_002885815.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bha:BH2920 hypothetical protein YP_002885816.1 TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; KEGG: bcb:BCB4264_A5510 phosphate acetyltransferase YP_002885817.1 PFAM: Chlorite dismutase; KEGG: bha:BH3825 heme peroxidase YP_002885819.1 KEGG: bca:BCE_1068 hypothetical protein YP_002885820.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli YP_002885821.1 KEGG: bcz:BCZK1136 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain YP_002885822.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002885823.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: bcr:BCAH187_A1397 N-(5'phosphoribosyl)anthranilate isomerase YP_002885824.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: bcz:BCZK1133 indole-3-glycerol-phosphate synthase YP_002885825.1 KEGG: bce:BC1234 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_002885826.1 PFAM: amino acid permease-associated region; KEGG: bac:BamMC406_2073 amino acid permease-associated region YP_002885827.1 PFAM: peptidase M23; KEGG: bha:BH3600 cell wall-binding protein YP_002885828.1 PFAM: protein of unknown function DUF423; KEGG: bha:BH3828 hypothetical protein YP_002885829.1 PFAM: protein of unknown function UPF0126; KEGG: bsu:BSU33460 hypothetical protein YP_002885830.1 PFAM: ABC transporter; KEGG: ABC1 family protein YP_002885831.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS2296 acetyltransferase YP_002885832.1 PFAM: protein of unknown function DUF205; KEGG: bsu:BSU18070 glycerol-3-phosphate acyltransferase PlsY YP_002885833.1 PFAM: Aldehyde Dehydrogenase; KEGG: bcr:BCAH187_A0401 succinate-semialdehyde dehydrogenase (NADP+) YP_002885834.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdj:Gdia_0209 haloacid dehalogenase domain protein hydrolase YP_002885835.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: reh:H16_A0333 rhodanese-related sulfurtransferase YP_002885836.1 KEGG: bat:BAS5244 hypothetical protein YP_002885837.1 KEGG: xfa:XF1486 hypothetical protein YP_002885838.1 KEGG: bcy:Bcer98_3954 bifunctional methionine sulfoxide reductase A/B protein; TIGRFAM: peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B YP_002885840.1 KEGG: bsu:BSU09120 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; 5TM Receptors of the LytS-YhcK type transmembrane region; SMART: GGDEF domain containing protein YP_002885841.1 KEGG: bha:BH3972 ABC transporter ATP-binding protein; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter; SMART: ATPase AAA YP_002885842.1 KEGG: bha:BH3971 ABC transporter ATP-binding protein; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA YP_002885843.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: bcb:BCB4264_A0424 transcriptional regulator, Crp family YP_002885844.1 PFAM: glycoside hydrolase family 31; KEGG: alpha-glucosidases, family 31 of glycosyl hydrolases YP_002885845.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP YP_002885846.1 TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: bcu:BCAH820_0409 arginine/ornithine antiporter YP_002885847.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: bcu:BCAH820_0408 ornithine carbamoyltransferase YP_002885848.1 catalyzes the degradation of arginine to citruline and ammonia YP_002885849.1 KEGG: bha:BH1948 magnesium (Mg2+) transporter; TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; hypothetical protein; SMART: hypothetical protein YP_002885850.1 uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function YP_002885851.1 KEGG: csa:Csal_1723 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: GGDEF domain containing protein YP_002885852.1 PFAM: beta-lactamase; KEGG: bha:BH2267 penicillin-binding protein YP_002885853.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_5884 GCN5-related N-acetyltransferase YP_002885854.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bsu:BSU31840 short chain dehydrogenase YP_002885856.1 KEGG: bcy:Bcer98_1403 hypothetical protein YP_002885857.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: pnu:Pnuc_1984 alcohol dehydrogenase YP_002885858.1 KEGG: bcb:BCB4264_A1026 hypothetical protein YP_002885859.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: bcz:BCZK3673 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002885860.1 KEGG: bcz:BCZK1040 hypothetical protein YP_002885863.1 KEGG: spl:Spea_3171 ECF subfamily RNA polymerase sigma-24 factor YP_002885864.1 PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: bsu:BSU10540 hypothetical protein YP_002885866.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily YP_002885867.1 KEGG: aba:Acid345_0544 hypothetical protein YP_002885868.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eca:ECA2522 virulence factor YP_002885870.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcr:BCAH187_A3405 transporter EamA family YP_002885871.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bce:BC0239 ABC transporter ATP-binding protein uup YP_002885873.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: bcy:Bcer98_1881 Cof-like hydrolase YP_002885874.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: bcy:Bcer98_1903 kynureninase YP_002885875.1 KEGG: bcz:BCZK2486 tryptophan 2,3-dioxygenase; TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase YP_002885876.1 TIGRFAM: arylformamidase; PFAM: cyclase family protein; KEGG: bcr:BCAH187_A2807 arylformamidase YP_002885877.1 KEGG: him-4; High Incidence of Males (increased X chromosome loss) YP_002885879.1 PFAM: glycosyl transferase family 2; KEGG: hypothetical protein ; K00729 dolichyl-phosphate beta-glucosyltransferase YP_002885880.1 PFAM: polysaccharide biosynthesis protein; KEGG: aba:Acid345_4612 hypothetical protein YP_002885881.1 PFAM: glycosyl transferase group 1; KEGG: csa:Csal_1721 glycosyl transferase, group 1 YP_002885882.1 PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN4078 glycosyl transferase MigA YP_002885883.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ank:AnaeK_3556 multi-sensor signal transduction histidine kinase YP_002885884.1 PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II; KEGG: ftn:FTN_1418 mannose-1-phosphate guanylyltransferase YP_002885885.1 KEGG: bcy:Bcer98_1171 mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_002885886.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bha:BH3732 ribose ABC transporter (ribose-binding protein) YP_002885887.1 PFAM: inner-membrane translocator; KEGG: bcu:BCAH820_0725 ribose ABC transporter permease YP_002885888.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcb:BCB4264_A0699 ribose ABC transporter ATP-binding protein YP_002885889.1 PFAM: RbsD or FucU transport; KEGG: bca:BCE_0734 D-ribose pyranase YP_002885890.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: bcy:Bcer98_0560 ribokinase YP_002885891.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bha:BH3727 transcriptional repressor of the ribose operon YP_002885892.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmr:PMI1249 acetyltransferase YP_002885893.1 KEGG: esa:ESA_00672 hypothetical protein YP_002885894.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_5090 acetyltransferase YP_002885895.1 PFAM: OsmC family protein; KEGG: dno:DNO_1109 OsmC-like family protein YP_002885896.1 KEGG: sbp:Sbal223_3950 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002885897.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; Male sterility domain; TrkA-N domain protein; KEGG: bsu:BSU10260 hypothetical protein YP_002885898.1 KEGG: bsu:BSU38290 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_002885899.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: msu:MS0677 phosphomethylpyrimidine kinase YP_002885900.1 KEGG: bsu:BSU38300 hydroxyethylthiazole kinase; TIGRFAM: hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase YP_002885901.1 PFAM: TENA/THI-4 domain protein; KEGG: bcr:BCAH187_A2668 transcriptional activator TenA YP_002885902.1 PFAM: Ion transport 2 domain protein; KEGG: bha:BH0947 hypothetical protein YP_002885904.1 PFAM: Streptomycin adenylyltransferase; KEGG: bcb:BCB4264_A1965 aminoglycoside 6-adenylyltransferase YP_002885905.1 KEGG: bca:BCE_1946 hypothetical protein YP_002885906.1 PFAM: NUDIX hydrolase; KEGG: bcy:Bcer98_2037 NUDIX hydrolase YP_002885907.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bcr:BCAH187_A5588 hydrolase, haloacid dehalogenase-like family YP_002885909.1 PFAM: Aldehyde Dehydrogenase; KEGG: bha:BH2010 aldehyde dehydrogenase YP_002885910.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: maq:Maqu_2184 alkylphosphonate utilization operon protein PhnA YP_002885911.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC2809 phosphinothricin N-acetyltransferase YP_002885912.1 PFAM: protein of unknown function DUF326; KEGG: bca:BCE_A0193 hypothetical protein YP_002885913.1 KEGG: bsu:BSU27780 hypothetical protein YP_002885914.1 PFAM: aldo/keto reductase; KEGG: bcz:BCZK1832 aldo/keto reductase family oxidoreductase YP_002885916.1 PFAM: Pirin domain protein; KEGG: smt:Smal_2986 pirin domain protein YP_002885918.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vha:VIBHAR_06850 acetyltransferase YP_002885920.1 PFAM: protein of unknown function UPF0157; KEGG: bsu:BSU23670 hypothetical protein YP_002885921.1 KEGG: bcr:BCAH187_A5000 DNA binding protein, DksA/TraR family YP_002885922.1 PFAM: peptidase M23; KEGG: bce:BC1431 cell wall endopeptidase YP_002885924.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A2530 acetyltransferase, GNAT family YP_002885925.1 KEGG: bcy:Bcer98_1894 GCN5-related N-acetyltransferase YP_002885926.1 PFAM: NUDIX hydrolase; KEGG: bce:BC1962 phosphohydrolase (MutT/NUDIX family protein) YP_002885927.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: bcb:BCB4264_A1955 microcin C7 self-immunity protein MccF YP_002885930.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_002885931.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sus:Acid_5607 acetyltransferase YP_002885932.1 PFAM: NUDIX hydrolase; KEGG: eba:ebA4102 hypothetical protein YP_002885933.1 PFAM: saccharopine dehydrogenase; KEGG: pap:PSPA7_4933 hypothetical protein YP_002885935.1 PFAM: NADPH-dependent FMN reductase; KEGG: scl:sce1880 reductase YP_002885936.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcz:BCZK0928 glyoxalase family protein YP_002885937.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcb:BCB4264_A3156 transcriptional regulator, MarR family YP_002885938.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS3058 spermine/spermidine acetyltransferase YP_002885939.1 PFAM: chloramphenicol acetyltransferase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dps:DP2058 chloramphenicol acetyltransferase YP_002885940.1 PFAM: protein of unknown function DUF402; KEGG: bcr:BCAH187_A1594 hypothetical protein YP_002885941.1 PFAM: protein of unknown function DUF58; KEGG: bat:BAS2823 hypothetical protein YP_002885942.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bat:BAS2824 AAA family ATPase YP_002885945.1 PFAM: aminoglycoside phosphotransferase; KEGG: lpc:LPC_2151 hypothetical protein YP_002885946.1 TIGRFAM: thiW protein YP_002885948.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A2024 diamine N-acetyltransferase YP_002885949.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH3220 hypothetical protein YP_002885950.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: yen:YE3266 hypothetical protein YP_002885951.1 PFAM: sulfatase; KEGG: bsu:BSU24840 hypothetical protein YP_002885952.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: pla:Plav_3503 3-demethylubiquinone-9 3-methyltransferase YP_002885953.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pau:PA14_36280 antibiotic biosynthesis monooxygenase YP_002885954.1 PFAM: MMPL domain protein; KEGG: bsu:BSU05650 hypothetical protein YP_002885955.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU05640 hypothetical protein YP_002885956.1 PFAM: FAD dependent oxidoreductase; KEGG: mrd:Mrad2831_0049 FAD dependent oxidoreductase YP_002885957.1 PFAM: protein of unknown function DUF975; KEGG: bca:BCE_5427 hypothetical protein YP_002885958.1 SMART: helix-turn-helix domain protein; KEGG: bsu:BSU18740 hypothetical protein YP_002885959.1 KEGG: bcy:Bcer98_3551 YoaS YP_002885960.1 PFAM: protein of unknown function DUF1541; KEGG: bsu:BSU05790 hypothetical protein YP_002885961.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_002885962.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_002885963.1 PFAM: YbbR family protein; KEGG: bha:BH0266 hypothetical protein YP_002885964.1 PFAM: protein of unknown function DUF147; KEGG: bha:BH0265 hypothetical protein YP_002885965.1 KEGG: bsu:BSU01740 hypothetical protein YP_002885966.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: this protein is involved in detoxification and protection against antimicrobial YP_002885967.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bha:BH3948 arginase YP_002885968.1 KEGG: bha:BH0242 activation of the KinB signalling pathway of sporulation YP_002885969.1 KEGG: bcb:BCB4264_A0169 mrp protein YP_002885970.1 forms a direct contact with the tRNA during translation YP_002885971.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002885972.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_002885973.1 PFAM: cobalt transport protein; KEGG: bsu:BSU01470 hypothetical protein YP_002885974.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcr:BCAH187_A0171 ABC transporter ATP-binding protein YP_002885975.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcr:BCAH187_A0170 ABC transporter ATP-binding protein YP_002885976.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002885977.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the subunit alpha is the first step in the sequential assembly of subunits to form the holoenzyme YP_002885978.1 PFAM: ribosomal protein S11; KEGG: bcu:BCAH820_0149 ribosomal protein S11 YP_002885979.1 PFAM: ribosomal protein S13; KEGG: bha:BH0160 30S ribosomal protein S13 YP_002885980.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_002885981.1 KEGG: bha:BH0158 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; SMART: RNA binding S1 domain protein YP_002885982.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_002885983.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_002885984.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_002885985.1 late assembly protein YP_002885986.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_002885987.1 TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 ; ribosomal protein S5 domain protein; KEGG: bsu:BSU01330 30S ribosomal protein S5 YP_002885988.1 binds 5S rRNA along with protein L5 and L25 YP_002885989.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002885990.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_002885991.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_002885992.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_002885993.1 KEGG: bha:BH0145 50S ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein YP_002885994.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_002885995.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_002885996.1 one of the stabilizing components for the large ribosomal subunit YP_002885997.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002885998.1 KEGG: bha:BH0140 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein YP_002885999.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002886000.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002886001.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002886002.1 PFAM: ribosomal protein L25/L23; KEGG: bha:BH0136 50S ribosomal protein L23 YP_002886003.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_002886004.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002886005.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_002886006.1 KEGG: hso:HS_1458 lipopolysaccharide choline phosphotransferase YP_002886007.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002886008.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002886009.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002886010.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_002886011.1 KEGG: bcy:Bcer98_0097 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_002886012.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_002886013.1 PFAM: methyltransferase small; KEGG: bcy:Bcer98_0095 methyltransferase small YP_002886014.1 TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12; KEGG: bha:BH0122 50S ribosomal protein L7/L12 YP_002886015.1 PFAM: ribosomal protein L10; KEGG: bcu:BCAH820_0110 ribosomal protein L10 YP_002886016.1 TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: bha:BH0120 50S ribosomal protein L1 YP_002886017.1 binds directly to 23S ribosomal RNA YP_002886018.1 KEGG: bha:BH0118 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein YP_002886019.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: bsu:BSU01000 preprotein translocase subunit SecE YP_002886020.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif YP_002886021.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_002886022.1 PFAM: protein of unknown function DUF901; KEGG: bsu:BSU00970 hypothetical protein YP_002886023.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bha:BH0113 tRNA/rRNA methyltransferase YP_002886024.1 PFAM: ribonuclease III; SMART: ribonuclease III; KEGG: bcy:Bcer98_0085 hypothetical protein YP_002886025.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_002886026.1 TIGRFAM: serine O-acetyltransferase; KEGG: bsu:BSU00930 serine acetyltransferase YP_002886027.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002886028.1 KEGG: bcu:BCAH820_0097 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_002886029.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: bha:BH0107 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002886030.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: bha:BH0106 hypothetical protein YP_002886031.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002886032.1 PFAM: ATPase AAA-2 domain protein; ATPase AAA; UvrB/UvrC protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; KEGG: bha:BH0103 class III stress response-related ATPase YP_002886033.1 PFAM: ATP:guanido phosphotransferase; KEGG: bcy:Bcer98_0075 ATP:guanido phosphotransferase YP_002886034.1 PFAM: UvrB/UvrC protein; KEGG: bca:BCE_0079 hypothetical protein YP_002886035.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: bcu:BCAH820_0088 transcriptional regulator CtsR YP_002886036.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bsu:BSU00820 lysyl-tRNA synthetase YP_002886037.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: bha:BH0097 nitrogen regulation transcriptional regulator YP_002886038.1 KEGG: dar:Daro_3183 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_002886039.1 KEGG: bsu:BSU00780 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_002886040.1 KEGG: bcr:BCAH187_A0083 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_002886041.1 PFAM: aminotransferase class IV; KEGG: bcy:Bcer98_0066 4-amino-4-deoxychorismate lyase YP_002886042.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: bsu:BSU00750 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II YP_002886043.1 PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: bcr:BCAH187_A0080 para-aminobenzoate synthase, component I YP_002886044.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: bcr:BCAH187_A0079 cysteine synthase A YP_002886045.1 PFAM: Hsp33 protein; KEGG: bsu:BSU00710 HSP33-like chaperonin YP_002886046.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: bcu:BCAH820_0074 pantothenate kinase, type III YP_002886047.1 KEGG: bsu:BSU00690 cell-division protein and general stress protein (class III heat-shock); TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002886048.1 KEGG: bcb:BCB4264_A0071 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002886049.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: bha:BH0083 cell-cycle protein YP_002886050.1 TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; PFAM: ABC transporter; KEGG: bca:BCE_1178 hypothetical protein YP_002886051.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: bha:BH0077 hypothetical protein YP_002886052.1 PFAM: septum formation initiator; KEGG: bsu:BSU00620 cell-division initiation protein YP_002886053.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bar:GBAA0056 S4 domain-containing protein YP_002886054.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bha:BH0072 hypothetical protein YP_002886055.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: bha:BH0071 hypothetical protein YP_002886056.1 KEGG: bcy:Bcer98_0048 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_002886057.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_002886058.1 KEGG: bcy:Bcer98_0045 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_002886059.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: bha:BH0065 UDP-N-acetylglucosamine pyrophosphorylase YP_002886060.1 PFAM: SpoVG family protein; KEGG: bha:BH0064 regulatory protein SpoVG YP_002886061.1 TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase; KEGG: bsu:BSU00470 purine operon repressor YP_002886062.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_002886063.1 PFAM: protein of unknown function DUF1021; KEGG: bsu:BSU00440 hypothetical protein YP_002886064.1 KEGG: bcu:BCAH820_0046 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase YP_002886065.1 KEGG: bha:BH0056 hypothetical protein; TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein YP_002886066.1 PFAM: 3D domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: bha:BH0055 hypothetical protein YP_002886067.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: bcz:BCZK0035 TatD related DNase YP_002886068.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, subunit beta; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; KEGG: bsu:BSU00380 methionyl-tRNA synthetase YP_002886069.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: bsu:BSU00370 transcriptional regulator YP_002886070.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bca:BCE_0034 hypothetical protein YP_002886071.1 PFAM: excinuclease ABC C subunit domain protein; SMART: excinuclease ABC C subunit domain protein; KEGG: bca:BCE_0033 GIY-YIG nuclease superfamily protein YP_002886072.1 PFAM: methyltransferase small; KEGG: bcb:BCB4264_A0039 hypothetical protein YP_002886073.1 in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA YP_002886074.1 PFAM: PSP1 domain protein; KEGG: bcu:BCAH820_0037 hypothetical protein YP_002886075.1 KEGG: bha:BH0044 DNA polymerase III subunit delta' YP_002886076.1 PFAM: protein of unknown function DUF970; KEGG: bha:BH0043 hypothetical protein YP_002886077.1 KEGG: ppg:PputGB1_1495 dTMP kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase YP_002886078.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bsu:BSU00270 hypothetical protein YP_002886079.1 KEGG: bsu:BSU00220 hypothetical protein YP_002886080.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002886081.1 PFAM: conserved hypothetical protein; KEGG: bcb:BCB4264_A0025 conserved hypothetical protein TIGR00103 YP_002886082.1 KEGG: bcz:BCZK0019 DNA polymerase III subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase AAA; SMART: ATPase AAA YP_002886083.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bca:BCE_0019 cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein YP_002886084.1 PFAM: deoxynucleoside kinase; KEGG: bce:BC0021 deoxyguanosine kinase YP_002886085.1 PFAM: deoxynucleoside kinase; KEGG: bcy:Bcer98_0014 deoxynucleoside kinase YP_002886086.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002886087.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; KEGG: bha:BH0021 serine-type D-Ala-D-Ala carboxypeptidase YP_002886088.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; glutamine amidotransferase class-I; KEGG: bce:BC0016 glutamine amidotransferase subunit PdxT YP_002886089.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_002886091.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bce:BC0583 GntR family transcriptional regulator YP_002886092.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bcy:Bcer98_0578 sortase family protein YP_002886093.1 PFAM: alpha amylase catalytic region; pullanase-associated protein; SMART: alpha amylase catalytic sub domain; KEGG: asu:Asuc_0315 periplasmic alpha-amylase precursor YP_002886094.1 KEGG: bcy:Bcer98_0008 inositol-5-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; hypothetical protein; SMART: hypothetical protein YP_002886095.1 KEGG: saz:Sama_1539 metal dependent phosphohydrolase YP_002886096.1 KEGG: bcb:BCB4264_A0006 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A YP_002886097.1 KEGG: bcy:Bcer98_0005 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_002886098.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: bsu:BSU00040 recombination protein F YP_002886099.1 TIGRFAM: S4 domain protein YaaA; KEGG: bsu:BSU00030 hypothetical protein YP_002886100.1 binds the polymerase to DNA and acts as a sliding clamp YP_002886101.1 KEGG: bsu:BSU00010 chromosomal replication initiation protein; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; ATPase AAA YP_002886102.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_002886103.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates YP_002886104.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: bsu:BSU41040 OxaA-like protein precursor YP_002886105.1 KEGG: pag:PLES_58051 hypothetical protein YP_002886106.1 PFAM: DNA polymerase beta domain protein region; KEGG: jan:Jann_1547 DNA polymerase, beta-like YP_002886107.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: bcy:Bcer98_4024 tRNA modification GTPase TrmE YP_002886108.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002886109.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: bcb:BCB4264_A5609 16S rRNA methyltransferase GidB YP_002886110.1 KEGG: bcy:Bcer98_4021 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_002886111.1 KEGG: bsu:BSU40960 site-specific DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_002886112.1 TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: bsu:BSU40950 hypothetical protein YP_002886113.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bcz:BCZK5174 mechanosensitive ion channel family protein YP_002886114.1 PFAM: protein of unknown function DUF951; KEGG: bha:BH4052 hypothetical protein YP_002886115.1 TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related; KEGG: bcr:BCAH187_A5663 GTP-binding protein YchF YP_002886116.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_002886117.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bha:BH4049 single-strand DNA-binding protein (phage-related protein) YP_002886118.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: bcy:Bcer98_4012 30S ribosomal protein S18 YP_002886119.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: GGDEF domain containing protein; KEGG: bha:BH4031 hypothetical protein YP_002886120.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002886121.1 unwinds double stranded DNA YP_002886122.1 KEGG: bcy:Bcer98_4007 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_002886123.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bsu:BSU40410 hypothetical protein YP_002886124.1 KEGG: bcz:BCZK5162 sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_002886125.1 PFAM: YycH family protein; KEGG: ban:BA5713 YycH protein YP_002886126.1 KEGG: bha:BH4024 hypothetical protein YP_002886127.1 PFAM: beta-lactamase domain protein; KEGG: bcy:Bcer98_4002 beta-lactamase domain-containing protein YP_002886128.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: bha:BH4022 serine protease Do YP_002886129.1 KEGG: ban:BA5709 hypothetical protein YP_002886130.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_002886131.1 KEGG: HMMR; hyaluronan-mediated motility receptor (RHAMM) ; K06267 hyaluronan-mediated motility receptor (RHAMM) YP_002886132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pap:PSPA7_2796 acetyltransferase YP_002886133.1 KEGG: esa:ESA_01293 hypothetical protein YP_002886134.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ent:Ent638_2512 AMP-dependent synthetase and ligase YP_002886135.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: hne:HNE_2072 alginate biosynthesis protein AlgI YP_002886137.1 PFAM: alpha/beta hydrolase fold; KEGG: bcz:BCZK2298 hydrolase YP_002886138.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; a fusion protein of this enzyme with MsrB provides protection against oxidative stress in Neisseria gonorrhoeae YP_002886139.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bha:BH0620 RNA polymerase ECF-type sigma factor YP_002886140.1 KEGG: bcb:BCB4264_A2125 hypothetical protein YP_002886142.1 KEGG: hypothetical protein YP_002886144.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; KEGG: ban:BA5703 DEAD-box ATP dependent DNA helicase YP_002886146.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: reu:Reut_B5462 esterase/lipase/thioesterase YP_002886147.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: pin:Ping_2107 glycoside hydrolase family 3 protein YP_002886148.1 KEGG: bsu:BSU26900 hypothetical protein YP_002886149.1 PFAM: Fibronectin-binding family protein; KEGG: bcy:Bcer98_1442 fibronectin-binding family protein YP_002886151.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ban:BA2866 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase YP_002886152.1 PFAM: protein of unknown function DUF567; KEGG: bsu:BSU38940 hypothetical protein YP_002886153.1 PFAM: NUDIX hydrolase; KEGG: Os02g0793300; hypothetical protein YP_002886154.1 PFAM: protein of unknown function DUF1349; KEGG: bcz:BCZK2191 hypothetical protein YP_002886155.1 PFAM: glycoside hydrolase family 16; carbohydrate-binding CenC domain protein; KEGG: hypothetical protein YP_002886156.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF472; protein of unknown function DUF471; KEGG: bcz:BCZK1347 hypothetical protein YP_002886157.1 KEGG: bcz:BCZK2914 methylphosphotriester-DNA alkyltransferase; PFAM: Ada metal-binding domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type YP_002886158.1 KEGG: bca:BCE_3774 DNA-3-methyladenine glycosidase; PFAM: HhH-GPD family protein; 8-oxoguanine DNA glycosylase domain protein; SMART: HhH-GPD family protein YP_002886159.1 KEGG: bcz:BCZK1844 methylated-DNA--[protein]-cysteine S-methyltransferase (6-O-methylguanine-DNA methyltransferase); TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_002886160.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bcy:Bcer98_1648 DegV family protein YP_002886161.1 PFAM: phosphoglycerate mutase; KEGG: bha:BH0285 hypothetical protein YP_002886162.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: pin:Ping_2683 type III restriction enzyme, res subunit YP_002886163.1 PFAM: NUDIX hydrolase; KEGG: NUDIX hydrolase YP_002886164.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_002886167.1 KEGG: bcy:Bcer98_2208 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: chemotaxis sensory transducer YP_002886168.1 PFAM: transcription factor CarD; KEGG: sfu:Sfum_3655 transcriptional regulator, CarD family YP_002886169.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcb:BCB4264_A0825 transcriptional regulator, MarR family YP_002886170.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs YP_002886171.1 KEGG: azo:azo2309 hypothetical protein YP_002886172.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: prw:PsycPRwf_1417 ABC transporter YP_002886173.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4597 binding-protein-dependent transport systems inner membrane component YP_002886174.1 PFAM: NLPA lipoprotein; KEGG: xca:xccb100_3813 outer membrane lipoprotein YP_002886175.1 KEGG: bph:Bphy_2389 hypothetical protein YP_002886176.1 PFAM: aldo/keto reductase; KEGG: zmo:ZMO1344 2,5-diketo-D-gluconate reductase YP_002886177.1 KEGG: bcr:BCAH187_A2858 hypothetical protein YP_002886178.1 PFAM: transcriptional regulator PadR family protein; KEGG: bcz:BCZK2537 PadR family transcriptional regulator YP_002886180.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bce:BC0376 alkyl hydroperoxide reductase subunit F YP_002886181.1 KEGG: bsu:BSU40090 alkyl hydroperoxide reductase; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein YP_002886182.1 KEGG: pcr:Pcryo_0017 HNH endonuclease YP_002886183.1 molecular chaperone YP_002886184.1 PFAM: regulatory protein TetR; KEGG: mmw:Mmwyl1_0215 TetR family transcriptional regulator YP_002886185.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B5463 short-chain dehydrogenase/reductase SDR YP_002886187.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: bcr:BCAH187_A2488 RNA pseudouridine synthase family protein YP_002886190.1 PFAM: nucleoside recognition domain protein; KEGG: bha:BH3947 hypothetical protein YP_002886191.1 PFAM: Luciferase-like monooxygenase; KEGG: bca:BCE_2096 luciferase family protein YP_002886192.1 KEGG: bja:blr2589 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein YP_002886193.1 KEGG: bcz:BCZK2669 hypothetical protein YP_002886194.1 PFAM: beta-lactamase domain protein; KEGG: bce:BC2330 Zn-dependent hydrolase YP_002886195.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vha:VIBHAR_05434 acetyltransferase YP_002886196.1 TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; KEGG: bcy:Bcer98_3971 guanosine 5'-monophosphate oxidoreductase YP_002886197.1 KEGG: glo:Glov_3328 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_002886198.1 PFAM: major facilitator superfamily MFS_1; KEGG: eba:ebA3906 hypothetical protein YP_002886199.1 PFAM: Catalase domain protein; KEGG: bcb:BCB4264_A0899 catalase YP_002886201.1 PFAM: FAD dependent oxidoreductase; KEGG: bcb:BCB4264_A3172 oxidoreductase YP_002886202.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bce:BC1072 endonuclease/exonuclease/phosphatase family protein YP_002886203.1 KEGG: rpb:RPB_3278 alpha/beta hydrolase YP_002886204.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bcy:Bcer98_0354 alpha amylase catalytic region YP_002886206.1 KEGG: bcb:BCB4264_A4649 hypothetical protein YP_002886207.1 KEGG: bcr:BCAH187_A4664 hypothetical protein YP_002886209.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bha:BH1284 amino acid carrier protein (sodium/alanine symporter) YP_002886210.1 PFAM: formate/nitrite transporter; KEGG: bcy:Bcer98_1035 formate/nitrite transporter YP_002886211.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH2160 hypothetical protein YP_002886212.1 KEGG: hpj:jhp0681 hypothetical protein YP_002886213.1 KEGG: mxa:MXAN_6616 hypothetical protein YP_002886214.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bha:BH3314 glycerate dehydrogenase YP_002886215.1 KEGG: bsu:BSU28340 hypothetical protein YP_002886216.1 KEGG: bar:GBAA0986 hypothetical protein YP_002886218.1 KEGG: bsu:BSU22480 methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein YP_002886219.1 PFAM: Conserved TM helix repeat-containing protein; KEGG: bsu:BSU09390 hypothetical protein YP_002886220.1 PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region; histidine kinase HAMP region domain protein; KEGG: sat:SYN_02721 HD domain/HAMP domain-containing protein YP_002886221.1 PFAM: branched-chain amino acid transport; KEGG: bha:BH2911 hypothetical protein YP_002886222.1 PFAM: AzlC family protein; KEGG: bha:BH2910 branched-chain amino acid transporter YP_002886223.1 PFAM: hypothetical protein; KEGG: vpa:VP1825 CBS domain-containing protein YP_002886224.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bha:BH3293 heme-degrading monooxygenase IsdG YP_002886225.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bat:BAS2349 D-alanyl-D-alanine carboxypeptidase family protein YP_002886228.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone YP_002886230.1 PFAM: ThiJ/PfpI domain protein; KEGG: bca:BCE_4593 ThiJ/PfpI family protein YP_002886231.1 PFAM: protein of unknown function DUF606; KEGG: bcb:BCB4264_A2367 hypothetical membrane spanning protein YP_002886232.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A2368 catabolite gene activator YP_002886233.1 PFAM: protein of unknown function DUF606; KEGG: bce:BC2336 hypothetical protein YP_002886234.1 PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; KEGG: rce:RC1_2523 CBS domain protein YP_002886235.1 KEGG: bha:BH1613 N-acyl-L-amino acid amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_002886236.1 PFAM: NUDIX hydrolase; KEGG: noc:Noc_0193 NUDIX hydrolase YP_002886237.1 PFAM: LemA family protein; KEGG: gbm:Gbem_2479 LemA family protein YP_002886238.1 metalloprotease YP_002886240.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vfm:VFMJ11_0846 pts system, N-acetylglucosamine-specific IIBC component YP_002886241.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bsu:BSU38070 transcriptional antiterminator YP_002886242.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: bcy:Bcer98_2749 PTS system, glucose-specific IIABC component YP_002886243.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; KEGG: bcy:Bcer98_2199 DNA mismatch repair protein MutS domain-containing protein YP_002886244.1 KEGG: eli:ELI_06775 ribonuclease YP_002886245.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: glo:Glov_0588 two component transcriptional regulator, winged helix family YP_002886246.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bca:BCE_3178 sensory box histidine kinase VicK YP_002886247.1 SMART: ATPase AAA; KEGG: rme:Rmet_4896 SMC protein-like protein YP_002886248.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bsu:BSU39080 BglG family transcriptional antiterminator YP_002886249.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: bha:BH0595 PTS system, beta-glucoside-specific enzyme II, ABC component YP_002886250.1 PFAM: glycoside hydrolase family 1; KEGG: bsu:BSU39260 beta-glucosidase YP_002886252.1 KEGG: bcb:BCB4264_A2972 hypothetical protein YP_002886253.1 TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: ROK family protein; mannose-6-phosphate isomerase type I; KEGG: bha:BH3916 mannose-6-phosphate isomerase YP_002886254.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: bha:BH3921 PTS system, cellobiose-specific enzyme II, B component YP_002886255.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: bha:BH3920 PTS system, cellobiose-specific enzyme II, A component YP_002886256.1 KEGG: bha:BH3919 PTS system, cellobiose-specific enzyme II, C component; TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_002886257.1 PFAM: glycoside hydrolase family 1; KEGG: bsu:BSU05840 hypothetical protein YP_002886258.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bha:BH3917 GntR family transcriptional regulator YP_002886259.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: baa:BA_2732 ABC transporter YP_002886260.1 KEGG: bcr:BCAH187_A2341 hypothetical protein YP_002886261.1 KEGG: bca:BCE_0437 hypothetical protein YP_002886262.1 PFAM: nitroreductase; KEGG: bsu:BSU07830 hypothetical protein YP_002886263.1 PFAM: nitroreductase; KEGG: bsu:BSU05660 hypothetical protein YP_002886264.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein ArsR; KEGG: bsu:BSU05670 hypothetical protein YP_002886265.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA YP_002886267.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: bcr:BCAH187_A1287 isocitrate lyase YP_002886268.1 PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: bcz:BCZK1950 cell division and morphogenesis-related protein YP_002886269.1 TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bcb:BCB4264_A0228 molybdenum ABC transporter molybdenum-binding protein YP_002886270.1 TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A0227 molybdate ABC transporter permease YP_002886272.1 KEGG: sus:Acid_2929 major facilitator transporter YP_002886273.1 TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: sus:Acid_2928 assimilatory nitrate reductase (NADH) subunit alpha apoprotein YP_002886274.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sus:Acid_2927 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002886275.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: sus:Acid_2926 Rieske (2Fe-2S) domain-containing protein YP_002886277.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: bcz:BCZK1936 Crp/FNR family transcriptional regulator YP_002886279.1 PFAM: major facilitator superfamily MFS_1; KEGG: hne:HNE_1559 nitrite extrusion protein YP_002886280.1 KEGG: bcr:BCAH187_A2280 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002886281.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: bcz:BCZK4515 molybdenum cofactor biosynthesis protein B YP_002886282.1 KEGG: bcy:Bcer98_3433 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002886283.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: bcz:BCZK3274 molybdopterin biosynthesis protein YP_002886284.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: bcr:BCAH187_A4857 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_002886285.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bha:BH3019 molybdopterin converting factor (subunit 2) YP_002886286.1 PFAM: thiamineS protein; KEGG: bsu:BSU14310 molybdopterin converting factor (subunit 1) YP_002886287.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: bcb:BCB4264_A4835 molybdenum cofactor biosynthesis protein MoaC YP_002886288.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bcz:BCZK4474 thiamine/molybdopterin biosynthesis MoeB-like protein YP_002886289.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bha:BH0982 hypothetical protein YP_002886290.1 KEGG: bha:BH1853 hypothetical protein YP_002886292.1 PFAM: polysaccharide deacetylase; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: bcb:BCB4264_A1966 polysaccharide deacetylase YP_002886293.1 KEGG: bce:BC4088 hypothetical protein YP_002886294.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcy:Bcer98_2013 ABC transporter-related protein YP_002886295.1 KEGG: mpo:Mpop_0443 sugar fermentation stimulation protein YP_002886296.1 PFAM: OsmC family protein; KEGG: bsu:BSU17280 hypothetical protein YP_002886297.1 KEGG: bsu:BSU38920 peptidase T; TIGRFAM: peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_002886298.1 PFAM: LrgB family protein; KEGG: gbm:Gbem_2907 LrgB family protein YP_002886299.1 PFAM: LrgA family protein; KEGG: bsu:BSU38320 holin-like protein YP_002886300.1 PFAM: Protein of unknown function DUF1963; KEGG: bcr:BCAH187_A2091 hypothetical protein YP_002886301.1 PFAM: acriflavin resistance protein; KEGG: ban:BA5686 AcrB/AcrD/AcrF family transporter YP_002886302.1 PFAM: regulatory protein TetR; KEGG: bce:BC1059 TetR family transcriptional regulator YP_002886303.1 PFAM: extracellular solute-binding protein family 1; KEGG: cff:CFF8240_0115 iron ABC transporter periplasmic iron-binding protein YP_002886304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tgr:Tgr7_0454 binding-protein-dependent transport systems inner membrane component YP_002886305.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH0512 ABC transporter ATP-binding protein YP_002886307.1 PFAM: peptidase C60 sortase A and B; KEGG: bha:BH3229 penicillin-binding protein 1A YP_002886308.1 KEGG: ppg:PputGB1_4140 hypothetical protein YP_002886309.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0711 AraC/XylS family transcriptional regulator YP_002886310.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bcy:Bcer98_2716 alpha amylase catalytic region YP_002886311.1 KEGG: pmu:PM1499 protoporphyrinogen oxidase YP_002886312.1 KEGG: bsu:BSU19030 hypothetical protein YP_002886313.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bcb:BCB4264_A4990 cold shock protein CspD YP_002886314.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bsu:BSU04220 hypothetical protein YP_002886315.1 PFAM: DoxX family protein; TQO small subunit DoxD; KEGG: bcb:BCB4264_A0195 hypothetical protein YP_002886316.1 KEGG: bha:BH3318 hypothetical protein YP_002886317.1 PFAM: major facilitator superfamily MFS_1; KEGG: bat:BAS1607 permease YP_002886318.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcz:BCZK1558 transcriptional regulator YP_002886319.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: bha:BH0726 hypothetical protein YP_002886320.1 PFAM: helix-turn-helix HxlR type; KEGG: aci:ACIAD1453 hypothetical protein YP_002886321.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mrd:Mrad2831_5773 glyoxalase/bleomycin resistance protein/dioxygenase YP_002886322.1 PFAM: 5'-3' exonuclease; SMART: 5'-3' exonuclease; KEGG: gur:Gura_1220 ribonuclease H YP_002886323.1 PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; KEGG: bsu:BSU09550 hypothetical protein YP_002886324.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bcy:Bcer98_3132 glucose-1-dehydrogenase YP_002886325.1 KEGG: gur:Gura_1221 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_002886326.1 PFAM: transcriptional regulator PadR family protein; KEGG: bcr:BCAH187_A3488 transcriptional regulator, PadR family YP_002886327.1 KEGG: bcr:BCAH187_A3486 hypothetical protein YP_002886328.1 PFAM: protein of unknown function DUF162; KEGG: bha:BH1834 hypothetical protein YP_002886329.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: bha:BH1833 hypothetical protein YP_002886330.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bcb:BCB4264_A1354 hypothetical protein YP_002886332.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bca:BCE_0817 xanthine/uracil permease family protein YP_002886334.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bce:BC0230 LacI family transcription regulator YP_002886335.1 PFAM: HesB/YadR/YfhF-family protein; KEGG: bcr:BCAH187_A3631 hypothetical protein YP_002886337.1 PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; KEGG: bcy:Bcer98_1924 manganese-dependent inorganic pyrophosphatase YP_002886338.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A2704 acetyltransferase YP_002886339.1 PFAM: protein of unknown function DUF990; KEGG: bcr:BCAH187_A0590 ABC transporter permease YP_002886340.1 PFAM: protein of unknown function DUF990; KEGG: bcr:BCAH187_A0589 ABC transporter permease YP_002886341.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcb:BCB4264_A0537 ABC transporter ATP-binding protein YP_002886342.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: bcr:BCAH187_A1739 hypothetical protein YP_002886343.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU07420 hypothetical protein YP_002886344.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mlo:mlr0241 hypothetical protein YP_002886345.1 TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bcr:BCAH187_A1737 xanthine phosphoribosyltransferase YP_002886346.1 TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bcb:BCB4264_A1627 xanthine permease YP_002886347.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rfr:Rfer_2168 hypothetical protein YP_002886349.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bcy:Bcer98_3916 xanthine/uracil/vitamin C permease YP_002886350.1 KEGG: bcz:BCZK2871 hypothetical protein YP_002886351.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcb:BCB4264_A5211 major facilitator family transporter YP_002886352.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bcy:Bcer98_0356 endonuclease/exonuclease/phosphatase YP_002886353.1 TIGRFAM: PTS system, IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: bcb:BCB4264_A0428 PTS system, IIBC component YP_002886354.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: acp:A2cp1_4332 tRNA/rRNA methyltransferase (SpoU) YP_002886355.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH1000 hypothetical protein YP_002886357.1 KEGG: bca:BCE_5448 hypothetical protein YP_002886358.1 PFAM: hypothetical protein; KEGG: bsu:BSU28970 hypothetical protein YP_002886359.1 KEGG: bcy:Bcer98_1067 7-cyano-7-deazaguanine reductase; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I YP_002886360.1 TIGRFAM: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; PFAM: Radical SAM domain protein; KEGG: bha:BH2242 hypothetical protein YP_002886361.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bcb:BCB4264_A1395 6-pyruvoyl tetrahydrobiopterin synthase YP_002886362.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bcy:Bcer98_1064 ExsB protein YP_002886363.1 TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC; Citrate transporter; KEGG: bsu:BSU09680 Na+/H+ antiporter YP_002886364.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair YP_002886365.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bca:BCE_0935 ThiJ/PfpI family protein YP_002886366.1 PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_0249 major facilitator transporter YP_002886367.1 KEGG: bsu:BSU31150 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_002886368.1 PFAM: LmbE family protein; KEGG: bha:BH3320 hypothetical protein YP_002886369.1 KEGG: bha:BH3319 hypothetical protein YP_002886370.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: bcy:Bcer98_3927 pyridoxal kinase YP_002886371.1 PFAM: hypothetical protein; KEGG: bca:BCE_2131 CBS domain-containing protein YP_002886372.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vvu:VV1_2510 acetyltransferase YP_002886373.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: bsu:BSU06720 lipid kinase YP_002886375.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bce:BC3128 MarR family transcriptional regulator YP_002886376.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bcy:Bcer98_1642 azoreductase YP_002886377.1 TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bcy:Bcer98_3919 uracil-DNA glycosylase YP_002886378.1 phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_002886379.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bcb:BCB4264_A3173 acetyl esterase YP_002886380.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; KEGG: bcz:BCZK5094 HAD superfamily hydrolase YP_002886381.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bat:BAS1832 DNA-binding response regulator YP_002886382.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bcb:BCB4264_A1978 sensor histidine kinase YP_002886383.1 PFAM: protein of unknown function DUF1499; KEGG: dal:Dalk_4690 protein of unknown function DUF1499 YP_002886384.1 PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933 family protein; KEGG: dvl:Dvul_1956 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_002886385.1 PFAM: OmpA/MotB domain protein; KEGG: bsu:BSU13680 flagellar motor protein MotB YP_002886386.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bsu:BSU13690 flagellar motor protein MotA YP_002886387.1 KEGG: bcr:BCAH187_A3587 hypothetical protein YP_002886388.1 PFAM: cation transporter; KEGG: bcb:BCB4264_A1442 potassium uptake protein, TrkH family YP_002886390.1 PFAM: Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase; KEGG: mxa:MXAN_3020 hypothetical protein YP_002886391.1 PFAM: restriction endonuclease; KEGG: bcr:BCAH187_A1093 type II restriction endonuclease family protein YP_002886393.1 PFAM: Domain of unknown function DUF1836; KEGG: bcr:BCAH187_A2893 hypothetical protein YP_002886394.1 PFAM: phosphatidate cytidylyltransferase; KEGG: hypothetical protein YP_002886395.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_002886396.1 TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bsu:BSU31930 L-alanine dehydrogenase YP_002886397.1 KEGG: bha:BH1072 hypothetical protein YP_002886398.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: bcy:Bcer98_2233 acid phosphatase/vanadium-dependent haloperoxidase related YP_002886399.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bsu:BSU02330 hypothetical protein YP_002886400.1 PFAM: hypothetical protein; KEGG: bcb:BCB4264_A1190 hypothetical protein YP_002886401.1 PFAM: Na+/H+ antiporter NhaC; KEGG: bcy:Bcer98_1155 Na+ antiporter NhaC YP_002886402.1 KEGG: bha:BH3036 two-component sensor histidine kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002886403.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_002886404.1 PFAM: metallophosphoesterase; KEGG: vfm:VFMJ11_0826 phosphodiesterase YfcE YP_002886405.1 PFAM: protein of unknown function DUF520; KEGG: bsu:BSU11020 nucleotide-binding protein YP_002886406.1 KEGG: bat:BAS2542 pullulanase, TIGRFAM: pullulanase, type I; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain YP_002886407.1 KEGG: bcb:BCB4264_A4280 hypothetical protein YP_002886409.1 PFAM: MMPL domain protein; KEGG: bce:BC1291 MmpL family protein YP_002886410.1 PFAM: protein of unknown function DUF161; KEGG: bat:BAS4531 hypothetical protein YP_002886412.1 KEGG: bcr:BCAH187_A3335 hypothetical protein YP_002886413.1 KEGG: bcy:Bcer98_2036 hypothetical protein YP_002886414.1 KEGG: bcb:BCB4264_A0837 hypothetical protein YP_002886415.1 PFAM: protein of unknown function DUF156; KEGG: bcu:BCAH820_0869 hypothetical protein YP_002886416.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bcu:BCAH820_0874 rhodanese domain family protein YP_002886417.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SirA family protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: pca:Pcar_0429 uncharacterized NAD(FAD)-dependent dehydrogenase YP_002886418.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bcb:BCB4264_A5206 sodium/alanine symporter family protein YP_002886421.1 PFAM: periplasmic solute binding protein; KEGG: bha:BH2760 hypothetical protein YP_002886422.1 KEGG: sus:Acid_0693 alpha/beta hydrolase domain-containing protein YP_002886423.1 PFAM: phosphoglycerate mutase; KEGG: bcy:Bcer98_2637 phosphoglycerate mutase YP_002886424.1 PFAM: protein of unknown function DUF456; KEGG: bsu:BSU25030 hypothetical protein YP_002886425.1 KEGG: bha:BH3310 hypothetical protein YP_002886427.1 KEGG: bcb:BCB4264_A0635 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_002886428.1 PFAM: isochorismatase hydrolase; KEGG: bha:BH3777 pyrazinamidase/nicotinamidase YP_002886429.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: aba:Acid345_2331 pterin-4-alpha-carbinolamine dehydratase YP_002886432.1 KEGG: bha:BH2900 N-acetylglutamate gamma-semialdehyde dehydrogenase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_002886433.1 KEGG: bha:BH2899 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_002886434.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: bha:BH2898 N-acetylglutamate 5-phosphotransferase YP_002886435.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: bca:BCE_4200 acetylornithine aminotransferase YP_002886436.1 KEGG: bha:BH2896 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl-phosphate synthase small chain YP_002886437.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl-phosphate synthetase large chain domain protein; KEGG: bsu:BSU11240 carbamoyl phosphate synthase large subunit YP_002886438.1 KEGG: bha:BH2894 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_002886439.1 PFAM: Rhomboid family protein; KEGG: bha:BH0517 hypothetical protein YP_002886440.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: bha:BH0518 holo-(acyl carrier protein) synthase YP_002886441.1 KEGG: bsu:BSU04640 D-alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_002886442.1 KEGG: bha:BH0521 hypothetical protein YP_002886443.1 PFAM: PemK family protein; KEGG: bsu:BSU04660 hypothetical protein YP_002886444.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bha:BH0527 positive regulator of sigma-B activity (anti-anti-sigma factor) YP_002886445.1 binds to sigma-B preventing the formation of an RNA polymerase holoenzyme YP_002886446.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase YP_002886447.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: bha:BH0531 hypothetical protein YP_002886448.1 PFAM: GCN5-related N-acetyltransferase; pentapeptide repeat protein; KEGG: bcr:BCAH187_A2510 acetyltransferase, GNAT family YP_002886449.1 KEGG: hypothetical protein YP_002886450.1 KEGG: bcy:Bcer98_1933 phosphoribulokinase/uridine kinase YP_002886451.1 KEGG: bsu:BSU08760 sporulation-control gene YP_002886452.1 PFAM: protein of unknown function UPF0079; KEGG: bcb:BCB4264_A0289 conserved hypothetical protein TIGR00150 YP_002886453.1 PFAM: peptidase M22 glycoprotease; KEGG: bcz:BCZK0233 O-sialoglycoprotein endopeptidase (glycoprotease) YP_002886454.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: bcu:BCAH820_0286 ribosomal-protein-alanine acetyltransferase YP_002886455.1 KEGG: bcb:BCB4264_A0292 O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_002886457.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: bsu:BSU14150 flavodoxin YP_002886458.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: smd:Smed_2447 alcohol dehydrogenase zinc-binding domain protein YP_002886459.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI2844 LysR family transcriptional regulator YP_002886460.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bcb:BCB4264_A3819 alcohol dehydrogenase, iron-containing YP_002886461.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: antibiotic biosynthesis monooxygenase YP_002886462.1 PFAM: ThiJ/PfpI domain protein; KEGG: abo:ABO_2639 hypothetical protein YP_002886464.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcy:Bcer98_0247 ABC transporter-related protein YP_002886465.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002886466.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bsu:BSU05980 component of the twin-arginine pre-protein translocation pathway YP_002886467.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bsu:BSU05990 component of the twin-arginine pre-protein translocation pathway YP_002886468.1 PFAM: cobalt transport protein; KEGG: ppr:PBPRA2241 ABC transporter membrane-spanning permease YP_002886469.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: vpa:VPA1482 ABC transporter ATP-binding protein YP_002886470.1 PFAM: protein of unknown function DUF1393; KEGG: bcb:BCB4264_A2665 hypothetical protein YP_002886471.1 PFAM: protein of unknown function DUF62; KEGG: hpj:jhp0648 hypothetical protein YP_002886472.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: NADH oxidase lateral transfer candidate YP_002886473.1 PFAM: PspC domain protein; KEGG: bcy:Bcer98_3206 phage shock protein C, PspC YP_002886474.1 PFAM: periplasmic binding protein; KEGG: bcr:BCAH187_A0743 iron compound ABC transporter iron compound-binding protein YP_002886475.1 PFAM: transport system permease; KEGG: bcb:BCB4264_A0653 iron compound ABC transporter permease YP_002886476.1 PFAM: transport system permease; inner-membrane translocator; KEGG: bcb:BCB4264_A0654 iron compound ABC transporter permease YP_002886477.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcb:BCB4264_A0655 ferric enterobactin transport ATP-binding protein FepC YP_002886478.1 KEGG: gox:GOX1008 hypothetical protein YP_002886479.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: sus:Acid_3142 NADP oxidoreductase, coenzyme F420-dependent YP_002886480.1 PFAM: TM2 domain containing protein; KEGG: pau:PA14_53630 hypothetical protein YP_002886483.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcy:Bcer98_0163 major facilitator transporter YP_002886484.1 PFAM: extracellular solute-binding protein family 5; KEGG: bcb:BCB4264_A0895 ABC transporter substrate-binding protein YP_002886487.1 PFAM: Abortive infection protein; KEGG: bha:BH0560 hypothetical protein YP_002886488.1 PFAM: chaperonin Cpn10; KEGG: bha:BH0561 co-chaperonin GroES YP_002886489.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_002886490.1 KEGG: bha:BH2857 hypothetical protein YP_002886492.1 PFAM: HNH endonuclease; KEGG: mca:MCA0503 hypothetical protein YP_002886493.1 KEGG: aeh:Mlg_1124 ATPase AAA YP_002886495.1 KEGG: vei:Veis_4662 hypothetical protein YP_002886496.1 KEGG: hypothetical protein YP_002886498.1 PFAM: stem cell self-renewal protein Piwi domain protein; KEGG: eba:ebA5244 hypothetical protein YP_002886500.1 PFAM: ABC transporter; KEGG: bha:BH3892 hypothetical protein YP_002886501.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH3893 ABC transporter ATP-binding protein YP_002886502.1 PFAM: LytTr DNA-binding region; KEGG: bha:BH3894 ABC transporter ATP-binding protein YP_002886503.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bha:BH3997 hypothetical protein YP_002886506.1 PFAM: isochorismatase hydrolase; KEGG: bsu:BSU26760 hypothetical protein YP_002886507.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bce:BC3244 leucine-responsive regulatory protein YP_002886508.1 KEGG: bcb:BCB4264_A2949 hypothetical protein YP_002886510.1 PFAM: DNA polymerase beta domain protein region; KEGG: vvu:VV2_0178 nucleotidyltransferase YP_002886512.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: vsa:VSAL_II0981 flavin containing amine oxidoreductase YP_002886513.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bar:GBAA0958 MarR family transcriptional regulator YP_002886514.1 PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH0293 hypothetical protein YP_002886520.1 PFAM: protein of unknown function DUF606; KEGG: bcz:pE33L466_0268 hypothetical protein YP_002886521.1 PFAM: protein of unknown function DUF606; KEGG: bcb:BCB4264_A2367 hypothetical membrane spanning protein YP_002886522.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A2368 catabolite gene activator YP_002886523.1 PFAM: protein of unknown function DUF606; KEGG: bce:BC2336 hypothetical protein YP_002886529.1 PFAM: ABC transporter; KEGG: rfr:Rfer_3971 ABC transporter YP_002886530.1 KEGG: hps:HPSH_03810 hypothetical protein YP_002886531.1 TIGRFAM: phytoene desaturase; PFAM: FAD dependent oxidoreductase; amine oxidase; KEGG: mrd:Mrad2831_5031 phytoene desaturase YP_002886533.1 KEGG: rme:Rmet_4469 secretion protein HlyD YP_002886534.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mxa:MXAN_4199 macrolide efflux ABC transporter ATP-binding protein YP_002886535.1 PFAM: protein of unknown function DUF214; KEGG: ABC efflux transporter inner membrane subunit YP_002886536.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcb:BCB4264_A3249 DNA-binding response regulator YP_002886537.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bcz:BCZK2948 sensor histidine kinase YP_002886538.1 PFAM: regulatory protein TetR; KEGG: bca:BCE_3136 TetR family transcriptional regulator YP_002886539.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bca:BCE_2543 ABC transporter ATP-binding protein YP_002886540.1 PFAM: ABC transporter; KEGG: bcr:BCAH187_A2599 ABC transporter permease YP_002886541.1 PFAM: hypothetical protein; KEGG: bcr:BCAH187_A4967 DedA family protein YP_002886542.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcb:BCB4264_A3169 regulatory protein VanR YP_002886543.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bcr:BCAH187_A0323 sensor histidine kinase YP_002886545.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bcr:BCAH187_A3251 drug resistance transporter EmrB/QacA family YP_002886546.1 PFAM: regulatory protein TetR; KEGG: bha:BH1887 hypothetical protein YP_002886547.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bha:BH1928 LacI family transcription regulator YP_002886548.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_002886549.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2725 lactose transport system (permease) YP_002886550.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vha:VIBHAR_06939 hypothetical protein YP_002886551.1 KEGG: bha:BH1923 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_002886553.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bcr:BCAH187_A3512 oxidoreductase, zinc-binding dehydrogenase family YP_002886555.1 KEGG: vfm:VFMJ11_0617 lichenan permease IIC component; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_002886556.1 PFAM: glycoside hydrolase family 1; KEGG: vfm:VFMJ11_0619 beta-glucosidase A YP_002886557.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA4409 PTS system, cellobiose-specific IIB component YP_002886558.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: bcz:BCZK4902 PTS system, cellobiose-specific IIA component (phosphotransferase enzyme II, A component) YP_002886559.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bsu:BSU40130 hypothetical protein YP_002886565.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bcr:BCAH187_A2321 secreted protein YP_002886567.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_002886568.1 PFAM: hypothetical protein; KEGG: bsu:BSU04160 transcriptional regulator YP_002886569.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: bha:BH3854 PTS system, mannitol-specific enzyme II, BC component YP_002886570.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bha:BH3852 PTS system, mannitol-specific enzyme II, A component YP_002886571.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: bha:BH3851 mannitol-1-phosphate 5-dehydrogenase YP_002886572.1 KEGG: bja:bll5864 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_002886573.1 PFAM: Abortive infection protein; KEGG: sus:Acid_4907 abortive infection protein YP_002886574.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcz:BCZK2447 acetyltransferase YP_002886575.1 PFAM: cell wall hydrolase/autolysin; protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: cell wall hydrolase/autolysin; SH3 domain protein; KEGG: bsu:BSU27580 hypothetical protein YP_002886576.1 KEGG: GD13259 gene product from transcript GD13259-RA YP_002886578.1 PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: bcu:BCAH820_0654 DNA-binding protein YP_002886580.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_1221 PAS/PAC sensor signal transduction histidine kinase YP_002886581.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bcy:Bcer98_3843 hypothetical protein YP_002886582.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: bca:BCE_2205 hypothetical protein YP_002886583.1 PFAM: protein of unknown function DUF58; KEGG: bcr:BCAH187_A2273 hypothetical protein YP_002886584.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: bha:BH0606 hypothetical protein YP_002886585.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; ExsB family protein; glutamine amidotransferase class-I; KEGG: bha:BH0607 bifunctional GMP synthase/glutamine amidotransferase protein YP_002886586.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bcu:BCAH820_0295 xanthine/uracil permease family protein YP_002886587.1 PFAM: VanW family protein; KEGG: bce:BC2985 vancomycin B-type resistance protein VanW YP_002886588.1 KEGG: bha:BH0622 hypothetical protein YP_002886589.1 PFAM: NUDIX hydrolase; KEGG: bcb:BCB4264_A4130 MutT/NUDIX family protein YP_002886590.1 KEGG: bsu:BSU06420 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_002886591.1 KEGG: bha:BH0624 phosphoribosylaminoimidazole carboxylase II; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201 YP_002886592.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: bha:BH0625 adenylosuccinate lyase YP_002886593.1 KEGG: bcy:Bcer98_0270 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_002886594.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: eli:ELI_02445 phosphoribosylformylglycinamidine synthase small subunit YP_002886595.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_002886596.1 KEGG: bcu:BCAH820_0326 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_002886597.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: bsu:BSU06490 amidophosphoribosyltransferase YP_002886598.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_002886599.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: bcr:BCAH187_A0370 phosphoribosylglycinamide formyltransferase YP_002886600.1 KEGG: bha:BH0633 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; SMART: AICARFT/IMPCHase bienzyme formylation region YP_002886601.1 KEGG: bcu:BCAH820_0331 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; ATP-grasp domain protein YP_002886602.1 KEGG: ppw:PputW619_4512 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_002886603.1 PFAM: amidohydrolase; KEGG: bha:BH0637 adenine deaminase YP_002886604.1 TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: bsu:BSU06580 hypothetical protein YP_002886605.1 PFAM: cation transporter; KEGG: bcy:Bcer98_1045 H(+)-transporting two-sector ATPase YP_002886607.1 KEGG: bha:BH0647 geranylgeranylglyceryl phosphate synthase-like protein; TIGRFAM: geranylgeranylglyceryl phosphate synthase family protein; PFAM: PcrB family protein YP_002886608.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: bha:BH0648 ATP-dependent DNA helicase YP_002886609.1 KEGG: bha:BH0649 NAD-dependent DNA ligase LigA; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; helix-hairpin-helix motif; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase ; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1 YP_002886610.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: GF14380 gene product from transcript GF14380-RA YP_002886611.1 PFAM: CamS sex pheromone cAM373 family protein; KEGG: bsu:BSU06630 hypothetical protein YP_002886612.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: tgr:Tgr7_2956 heat shock protein DnaJ domain-containing protein YP_002886613.1 KEGG: bcz:BCZK1066 ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA YP_002886615.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bat:BAS1737 coenzyme PQQ synthesis protein YP_002886616.1 KEGG: bcy:Bcer98_0826 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase YP_002886618.1 PFAM: Glutaminase, core; KEGG: bha:BH2627 glutaminase YP_002886619.1 PFAM: CHAD domain containing protein; KEGG: bxe:Bxe_B2764 hypothetical protein YP_002886620.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones YP_002886621.1 KEGG: bcy:Bcer98_2754 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; amidohydrolase YP_002886622.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate YP_002886623.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bsu:BSU35840 hypothetical protein YP_002886624.1 KEGG: bha:BH0419 GntR family transcriptional regulator; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_002886625.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: bcb:BCB4264_A3732 alanyl-tRNA synthetase family protein YP_002886626.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csa:Csal_2448 GCN5-related N-acetyltransferase YP_002886627.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_002886628.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; KEGG: dvm:DvMF_2382 aspartate-semialdehyde dehydrogenase YP_002886629.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bha:BH1742 dihydrodipicolinate synthase YP_002886630.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_002886631.1 PFAM: Tetrahydrodipicolinate succinyltransferase domain protein; transferase hexapeptide repeat containing protein; KEGG: bcr:BCAH187_A4101 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase YP_002886632.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: cvi:CV_2094 branched-chain amino acid aminotransferase YP_002886633.1 KEGG: bsu:BSU04640 D-alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_002886634.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bsu:BSU23380 diaminopimelate decarboxylase YP_002886635.1 PFAM: nitroreductase; KEGG: bcy:Bcer98_0644 nitroreductase YP_002886637.1 KEGG: bph:Bphy_4925 hexapaptide repeat-containing transferase YP_002886638.1 KEGG: bha:BH0640 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase YP_002886640.1 PFAM: Na+/H+ antiporter NhaC; KEGG: spl:Spea_2853 Na+/H+ antiporter NhaC YP_002886641.1 PFAM: extracellular solute-binding protein family 5; KEGG: bat:BAS1894 oligopeptide ABC transporter oligopeptide-binding protein YP_002886642.1 PFAM: amino acid permease-associated region; KEGG: bcb:BCB4264_A0422 arginine/ornithine antiporter YP_002886643.1 KEGG: mms:mma_0597 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_002886644.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: bha:BH3943 ornithine--oxo-acid transaminase YP_002886645.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: bca:BCE_5216 camphor resistance protein CrcB YP_002886646.1 PFAM: Camphor resistance CrcB protein; KEGG: bcr:BCAH187_A5236 CrcB protein YP_002886647.1 KEGG: bcb:BCB4264_A1119 hypothetical protein YP_002886648.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH4037 cadmium-binding protein (cadmium efflux system accessory protein) YP_002886649.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bcr:BCAH187_A0723 heavy metal-transporting ATPase YP_002886650.1 KEGG: bcb:BCB4264_A5186 methyl-accepting chemotaxis protein YP_002886651.1 SMART: alpha amylase catalytic sub domain; KEGG: pat:Patl_2810 alpha amylase, catalytic region YP_002886652.1 KEGG: bca:BCE_5479 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_002886653.1 PFAM: protein of unknown function DUF161; KEGG: bcr:BCAH187_A5178 hypothetical protein YP_002886654.1 PFAM: protein of unknown function DUF1232; KEGG: psp:PSPPH_1583 hypothetical protein YP_002886655.1 PFAM: peptidase M29 aminopeptidase II; KEGG: bha:BH2245 aminopeptidase YP_002886656.1 PFAM: esterase; KEGG: vsp:VS_II0160 hypothetical protein YP_002886657.1 PFAM: regulatory protein TetR; KEGG: csa:Csal_0106 transcriptional regulator, TetR family YP_002886658.1 PFAM: small multidrug resistance protein; KEGG: mes:Meso_0982 small multidrug resistance protein YP_002886659.1 PFAM: small multidrug resistance protein; KEGG: bsu:BSU13100 hypothetical protein YP_002886660.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcy:Bcer98_3081 GCN5-related N-acetyltransferase YP_002886661.1 PFAM: protein of unknown function DUF554; KEGG: bcy:Bcer98_1448 hypothetical protein YP_002886662.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: bsu:BSU23800 pyrroline-5-carboxylate reductase YP_002886663.1 PFAM: protein of unknown function DUF37; KEGG: bcr:BCAH187_A4932 conserved hypothetical protein TIGR00278 YP_002886664.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bha:BH4033 amino acid transporter YP_002886665.1 PFAM: Ion transport 2 domain protein; KEGG: bcb:BCB4264_A0706 hypothetical protein YP_002886666.1 PFAM: cytochrome P450; KEGG: mes:Meso_4213 fatty acid alpha hydroxylase, cytochrome P450 YP_002886667.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: spc:Sputcn32_3891 dTDP-4-dehydrorhamnose reductase YP_002886668.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A1401 acetyltransferase, GNAT family YP_002886669.1 PFAM: protein of unknown function DUF368; KEGG: bcr:BCAH187_A5318 hypothetical protein YP_002886670.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bid:Bind_1881 isoprenylcysteine carboxyl methyltransferase YP_002886671.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bcz:BCZK0324 thioredoxin reductase YP_002886672.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcb:BCB4264_A1916 glyoxalase family protein YP_002886677.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bcy:Bcer98_0803 cell envelope-related transcriptional attenuator YP_002886678.1 PFAM: NmrA family protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: maq:Maqu_2944 NAD-dependent epimerase/dehydratase YP_002886679.1 PFAM: PspC domain protein; KEGG: vco:VC0395_A1281 phage shock protein C YP_002886680.1 PFAM: Aldose 1-epimerase; KEGG: bcr:BCAH187_A1765 LacX protein YP_002886681.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bce:BC3612 thiol:disulfide interchange protein TlpA YP_002886682.1 KEGG: bcz:BCZK2531 hypothetical protein YP_002886683.1 PFAM: beta-lactamase domain protein; KEGG: oca:OCAR_5178 beta lactamase YP_002886687.1 KEGG: bsu:BSU35780 N-acetylglucosaminidase (major autolysin) (CWBP90); PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SH3 type 3 domain protein; SMART: Lysozyme subfamily 2; SH3 domain protein YP_002886688.1 PFAM: alpha/beta hydrolase fold; KEGG: bcb:BCB4264_A1861 hydrolase, alpha/beta fold family YP_002886689.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: bcr:BCAH187_A2201 formate--tetrahydrofolate ligase YP_002886690.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7001 ABC transporter permease YP_002886691.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2224 maltose transport system (permease) YP_002886692.1 catalyzes the formation of asparagine from aspartate and ammonia YP_002886693.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU32600 hypothetical protein YP_002886694.1 KEGG: afw:Anae109_0246 carbohydrate-binding and sugar hydrolysis YP_002886695.1 KEGG: bcr:BCAH187_A0693 lipoprotein YP_002886696.1 KEGG: afw:Anae109_0249 hypothetical protein YP_002886697.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: shw:Sputw3181_0583 ABC transporter YP_002886698.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcy:Bcer98_3372 EmrB/QacA family drug resistance transporter YP_002886699.1 PFAM: glucose sorbosone dehydrogenase; KEGG: bha:BH2090 glucose dehydrogenase-B YP_002886700.1 PFAM: peptidase M48 Ste24p; Ankyrin; peptidase M56 BlaR1; SMART: Ankyrin; KEGG: son:SO_0110 protease YP_002886701.1 PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH1122 hypothetical protein YP_002886702.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_002886703.1 TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: bcb:BCB4264_A1518 purine nucleoside phosphorylase YP_002886704.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcb:BCB4264_A0704 bicyclomycin resistance protein YP_002886705.1 PFAM: Aldehyde Dehydrogenase; KEGG: bha:BH0865 aldehyde dehydrogenase YP_002886706.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bcy:Bcer98_3398 CRP/FNR family transcriptional regulator YP_002886707.1 PFAM: cytochrome c oxidase subunit II; KEGG: bha:BH0740 cytochrome c oxidase subunit II YP_002886708.1 PFAM: cytochrome c oxidase subunit I; KEGG: bha:BH0739 cytochrome c oxidase subunit I YP_002886709.1 phosphoprylates nucleosides or dinucleosides to make UMP or CMP as part of the pyrimidine salvage pathway YP_002886710.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bha:BH2647 GntR family transcriptional regulator YP_002886711.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH2648 ABC transporter ATP-binding protein YP_002886712.1 KEGG: bha:BH2649 hypothetical protein YP_002886715.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: bcb:BCB4264_A2119 ATP-dependent RNA helicase, DEAD/DEAH box family YP_002886717.1 KEGG: bcy:Bcer98_0431 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_002886718.1 KEGG: bcb:BCB4264_A0513 pyruvate formate-lyase-activating enzyme; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein YP_002886719.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: bcz:BCZK1820 ribosome-associated GTPase YP_002886720.1 KEGG: bcy:Bcer98_1156 hypothetical protein YP_002886721.1 KEGG: bcz:BCZK1318 PspA/IM30 family protein YP_002886722.1 KEGG: bcr:BCAH187_A1599 hypothetical protein YP_002886723.1 KEGG: bcr:BCAH187_A1600 sensor histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_002886724.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bcy:Bcer98_1160 two component LuxR family transcriptional regulator YP_002886725.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcz:BCZK2729 ribosomal-protein-alanine acetyltransferase YP_002886726.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: alcohol dehydrogenase GroES domain protein YP_002886727.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU07370 hypothetical protein YP_002886728.1 KEGG: bcb:BCB4264_A2223 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_002886731.1 KEGG: bha:BH1329 hypothetical protein YP_002886732.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: bcu:BCAH820_0259 ATP-dependent RNA helicase, DEAD/DEAH box family YP_002886734.1 PFAM: EAL domain protein; KEGG: bcb:BCB4264_A4094 EAL-domain protein YP_002886735.1 KEGG: bcy:Bcer98_3875 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_002886736.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bat:BAS4746 N-acylamino acid racemase YP_002886737.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: bcy:Bcer98_3490 O-succinylbenzoic acid--CoA ligase YP_002886738.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bsu:BSU30800 naphthoate synthase YP_002886739.1 PFAM: alpha/beta hydrolase fold; KEGG: bcy:Bcer98_3492 alpha/beta hydrolase fold YP_002886740.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; KEGG: bcr:BCAH187_A4997 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YP_002886741.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: bsu:BSU30830 menaquinone-specific isochorismate synthase YP_002886742.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate YP_002886743.1 PFAM: carbonic anhydrase; KEGG: bsu:BSU34670 hypothetical protein YP_002886744.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: bsu:BSU07900 hypothetical protein YP_002886745.1 PFAM: NUDIX hydrolase; KEGG: bcb:BCB4264_A3651 MutT/NUDIX family protein YP_002886746.1 PFAM: PfkB domain protein; KEGG: spl:Spea_2951 ribokinase-like domain-containing protein YP_002886747.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bcy:Bcer98_0397 heavy metal translocating P-type ATPase YP_002886748.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcb:BCB4264_A0476 transporter EamA family YP_002886750.1 PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH0884 hypothetical protein YP_002886752.1 PFAM: YfkB-like domain protein; Radical SAM domain protein; KEGG: bcu:BCAH820_0467 hypothetical protein YP_002886754.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: bcu:BCAH820_0472 23S rRNA (uracil-5-)-methyltransferase RumA YP_002886755.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bsu:BSU25300 cytidine/deoxycytidine deaminase YP_002886758.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH1945 two-component sensor histidine kinase YP_002886759.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcr:BCAH187_A1453 DNA-binding response regulator YP_002886760.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcy:Bcer98_0435 hypothetical protein YP_002886761.1 PFAM: amidohydrolase; amidohydrolase; KEGG: bcu:BCAH820_0495 chlorohydrolase family protein YP_002886762.1 PFAM: domain of unknown function DUF1731; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: bsu:BSU08510 hypothetical protein YP_002886763.1 PFAM: regulatory protein RecX; KEGG: bha:BH0924 recombination regulator RecX YP_002886764.1 PFAM: L-lactate permease; KEGG: bha:BH0219 L-lactate permease YP_002886765.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: bce:BC0870 multidrug ABC transporter permease/ATP-binding protein YP_002886766.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: bca:BCE_0943 ABC transporter ATP-binding/permease YP_002886767.1 PFAM: protein of unknown function UPF0027; KEGG: bcr:BCAH187_A3033 hypothetical protein YP_002886768.1 KEGG: bsu:BSU08530 hypothetical protein YP_002886769.1 KEGG: bsu:BSU08560 hypothetical protein YP_002886770.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: gur:Gura_0980 XRE family transcriptional regulator YP_002886771.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: hap:HAPS_0798 spermidine/putrescine ABC transporter ATPase protein YP_002886772.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hip:CGSHiEE_04255 spermidine/putrescine ABC transporter membrane protein YP_002886773.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_1958 ornithine carbamoyltransferase YP_002886774.1 PFAM: extracellular solute-binding protein family 1; KEGG: maq:Maqu_0344 extracellular solute-binding protein YP_002886775.1 PFAM: NERD domain protein; KEGG: pmy:Pmen_4033 NERD domain-containing protein YP_002886776.1 PFAM: protein of unknown function DUF779; KEGG: bha:BH0680 hypothetical protein YP_002886777.1 PFAM: Aldehyde Dehydrogenase; KEGG: bha:BH0681 aldehyde dehydrogenase YP_002886778.1 PFAM: YceI family protein; KEGG: afw:Anae109_3192 YceI family protein YP_002886779.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: bha:BH0929 hypothetical protein YP_002886780.1 KEGG: bcr:BCAH187_A0578 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_002886781.1 KEGG: bha:BH1480 hypothetical protein YP_002886782.1 PFAM: protein of unknown function DUF402; KEGG: bha:BH0940 hypothetical protein YP_002886783.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: bsu:BSU08690 hypothetical protein YP_002886784.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: bsu:BSU31500 hypothetical protein YP_002886785.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcu:BCAH820_0936 major facilitator family transporter YP_002886786.1 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate YP_002886787.1 PFAM: ferric-uptake regulator; KEGG: bsu:BSU08730 FUR family transcriptional regulator YP_002886788.1 KEGG: bha:BH0952 hypothetical protein YP_002886789.1 KEGG: bsu:BSU08750 hypothetical protein YP_002886790.1 KEGG: efe:EFER_3397 transporter component YP_002886791.1 KEGG: bca:BCE_3010 hypothetical protein YP_002886792.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: bce:BC0544 iron-sulfur cluster-binding protein YP_002886793.1 KEGG: pfo:Pfl01_3566 methylated-DNA-(protein)-cysteine S-methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_002886794.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bsu:BSU08930 rRNA methylase-like protein YP_002886796.1 KEGG: bsu:BSU31510 hypothetical protein YP_002886797.1 KEGG: bcz:BCZK2726 hypothetical protein YP_002886798.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bsu:BSU31490 penicillin-binding protein 4 YP_002886799.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_002886800.1 TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: bha:BH1086 required for glycogen biosynthesis YP_002886801.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; KEGG: bce:BC4864 glycogen synthase YP_002886802.1 KEGG: bcr:BCAH187_A5005 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_002886803.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bcb:BCB4264_A1634 rhodanese-like domain protein YP_002886804.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: bcy:Bcer98_3530 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_002886805.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: bsu:BSU39500 hypothetical protein YP_002886806.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cko:CKO_01027 hypothetical protein YP_002886807.1 PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: bca:BCE_4067 sugar ABC transporter ATP-binding protein YP_002886808.1 PFAM: helix-turn-helix Fis-type; KEGG: bha:BH1141 hypothetical protein YP_002886809.1 PFAM: protein of unknown function DUF445; KEGG: bca:BCE_0952 hypothetical protein YP_002886810.1 PFAM: protein of unknown function DUF964; KEGG: bsu:BSU09800 hypothetical protein YP_002886811.1 PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: gsu:GSU0844 trk family potassium uptake protein YP_002886813.1 KEGG: bcy:Bcer98_0793 hypothetical protein YP_002886814.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: aeh:Mlg_2775 DNA-directed DNA polymerase YP_002886815.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: bsu:BSU24740 hypothetical protein YP_002886816.1 PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bsu:BSU09930 3'-5' exoribonuclease YhaM YP_002886817.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bcy:Bcer98_0878 peptidylprolyl isomerase YP_002886818.1 KEGG: bsu:BSU09980 hypothetical protein YP_002886819.1 hpr; ScoC; MarR family; protease production regulatory protein YP_002886821.1 KEGG: im:7149072 YP_002886822.1 PFAM: histidine triad (HIT) protein; KEGG: bha:BH1189 Hit-like protein involved in cell-cycle regulation YP_002886824.1 PFAM: transglycosylase-associated protein; KEGG: bcy:Bcer98_1980 transglycosylase-associated protein YP_002886825.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcy:Bcer98_0815 ABC transporter-related protein YP_002886826.1 PFAM: ABC transporter; KEGG: bha:BH1192 ABC transporter (permease) YP_002886827.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bha:BH3834 ammonium transporter YP_002886828.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bha:BH1494 transcriptional regulator YP_002886829.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_002886830.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_002886831.1 KEGG: bha:BH1204 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase YP_002886832.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: bha:BH1746 hypothetical protein YP_002886833.1 KEGG: bsu:BSU10250 hypothetical protein; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase YP_002886835.1 activates fatty acids by binding to coenzyme A YP_002886836.1 PFAM: protein of unknown function DUF156; KEGG: bha:BH0558 hypothetical protein YP_002886837.1 TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bcy:Bcer98_0518 copper-translocating P-type ATPase YP_002886838.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bca:BCE_A0181 copper ion binding protein YP_002886840.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH1172 two-component response regulator YP_002886841.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bsu:BSU33020 two-component sensor histidine kinase YP_002886842.1 PFAM: ComK family protein; KEGG: bcb:BCB4264_A1189 competence transcription factor YP_002886843.1 PFAM: acriflavin resistance protein; KEGG: hch:HCH_06591 cation/multidrug efflux pump YP_002886845.1 KEGG: hypothetical protein LOC685797 YP_002886846.1 PFAM: globin; KEGG: bha:BH2854 hypothetical protein YP_002886847.1 TIGRFAM: ATP-dependent nuclease subunit B; KEGG: bsu:BSU10620 ATP-dependent deoxyribonuclease (subunit B) YP_002886848.1 KEGG: bcy:Bcer98_0860 recombination helicase AddA; TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase YP_002886849.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gsu:GSU0013 MarR family transcriptional regulator YP_002886850.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: scl:sce5644 carbohydrate ABC transporter YP_002886851.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: scl:sce5645 carbohydrate ABC transporter YP_002886852.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dde:Dde_2387 two component transcriptional regulator YP_002886853.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_1221 PAS/PAC sensor signal transduction histidine kinase YP_002886854.1 PFAM: protein of unknown function DUF1516; KEGG: bsu:BSU10760 hypothetical protein YP_002886855.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: sfu:Sfum_0517 methyltransferase type 12 YP_002886856.1 TIGRFAM: phytoene desaturase; PFAM: FAD dependent oxidoreductase; amine oxidase; KEGG: mrd:Mrad2831_5038 phytoene desaturase YP_002886857.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; KEGG: mxa:MXAN_0895 phytoene desaturase YP_002886858.1 PFAM: Squalene/phytoene synthase; KEGG: Os06g0729000; hypothetical protein ; K02291 phytoene synthase YP_002886859.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mpo:Mpop_3632 phytoene desaturase YP_002886860.1 PFAM: glycosyl transferase family 2; KEGG: met:M446_3158 glycosyl transferase family protein YP_002886861.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: mxa:MXAN_0902 acyltransferase domain protein YP_002886862.1 KEGG: bid:Bind_2275 membrane protein-like protein YP_002886863.1 TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bcy:Bcer98_1138 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_002886864.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bcy:Bcer98_2119 YbaK/EbsC protein YP_002886865.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bha:BH0202 enoyl-CoA hydratase YP_002886866.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: bsu:BSU10820 hypothetical protein YP_002886867.1 PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: bcb:BCB4264_A4120 alpha-amylase YP_002886868.1 PFAM: extracellular solute-binding protein family 1; KEGG: bcr:BCAH187_A4138 maltosaccharide ABC transporter maltosaccharide-binding protein YP_002886869.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcy:Bcer98_2713 binding-protein-dependent transport systems inner membrane component YP_002886870.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ban:BA4227 maltosaccharide ABC transporter permease YP_002886871.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mxa:MXAN_5374 glycosyl hydrolase, family 13 YP_002886872.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bcy:Bcer98_2711 alanine racemase YP_002886873.1 KEGG: GK22070 gene product from transcript GK22070-RA YP_002886874.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: nmn:NMCC_1753 maltose phosphorylase YP_002886875.1 PFAM: protein of unknown function DUF161; KEGG: bha:BH2916 hypothetical protein YP_002886876.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: bha:BH2906 hypothetical protein YP_002886878.1 PFAM: Thioredoxin domain; KEGG: bcr:BCAH187_A0920 thioredoxin YP_002886879.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine YP_002886880.1 TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: bcy:Bcer98_3062 HAD family phosphatase YP_002886881.1 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis YP_002886882.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: bha:BH1324 shikimate 5-dehydrogenase YP_002886883.1 PFAM: protein of unknown function UPF0044; KEGG: ban:BA4560 hypothetical protein YP_002886884.1 KEGG: bcy:Bcer98_3058 nicotinic acid mononucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_002886885.1 KEGG: bsu:BSU25630 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002886886.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: bsu:BSU25620 hypothetical protein YP_002886887.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bcr:BCAH187_A4462 hypothetical protein YP_002886888.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcr:BCAH187_A4779 hypothetical protein YP_002886889.1 KEGG: sat:SYN_00670 hypothetical protein YP_002886890.1 PFAM: Catalase domain protein; KEGG: bcy:Bcer98_0874 catalase YP_002886892.1 PFAM: nitroreductase; KEGG: bsu:BSU38110 FMN-containing NADPH-linked nitro/flavin reductase YP_002886893.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; Redoxin domain protein; KEGG: bca:BCE_A0190 cytochrome c biogenesis protein YP_002886894.1 PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: bcb:BCB4264_A3523 hydroxyacylglutathione hydrolase YP_002886895.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bcr:BCAH187_A0942 rhodanese domain family protein YP_002886896.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mmw:Mmwyl1_0717 rhodanese domain-containing protein YP_002886897.1 PFAM: protein of unknown function DUF81; KEGG: bca:BCE_0872 hypothetical protein YP_002886899.1 PFAM: isochorismatase hydrolase; KEGG: scl:sce2665 isochorismatase YP_002886900.1 KEGG: bat:BAS1275 ABC transporter permease YP_002886901.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcy:Bcer98_1080 ABC transporter-related protein YP_002886902.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_002886903.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: bha:BH2205 dihydrolipoamide acetyltransferase YP_002886904.1 KEGG: rru:Rru_A2868 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein YP_002886905.1 KEGG: bsu:BSU33480 thiol-disulfide oxidoreductase YP_002886906.1 PFAM: Disulphide bond formation protein DsbB; KEGG: bsu:BSU33470 thiol-disulfide oxidoreductase YP_002886907.1 PFAM: electron transport protein SCO1/SenC; KEGG: bcr:BCAH187_A2359 SCO1/SenC family lipoprotein YP_002886908.1 KEGG: bce:BC2695 outer membrane protein RomA YP_002886909.1 KEGG: hypothetical protein similar to chloroquine resistance marker protein YP_002886911.1 KEGG: hypothetical protein YP_002886912.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcr:BCAH187_A2945 transporter YP_002886913.1 PFAM: DSBA oxidoreductase; KEGG: bcr:BCAH187_A0329 protein disulfide isomerase YP_002886914.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bcb:BCB4264_A5575 channel protein, hemolysin III family YP_002886915.1 PFAM: Domain of unknown function DUF1836; KEGG: bcb:BCB4264_A5576 hypothetical protein YP_002886916.1 PFAM: protein of unknown function DUF1696; KEGG: bcb:BCB4264_A4595 hypothetical protein YP_002886917.1 PFAM: aldo/keto reductase; KEGG: bcy:Bcer98_2796 2,5-didehydrogluconate reductase YP_002886918.1 KEGG: sus:Acid_7368 hypothetical protein YP_002886919.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA0228 ABC transporter ATP-binding protein YP_002886921.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bcz:BCZK1581 cobalt-zinc-cadmium resistance protein YP_002886922.1 PFAM: metallophosphoesterase; KEGG: bca:BCE_2541 hypothetical protein YP_002886923.1 PFAM: OsmC family protein; KEGG: ccs:CCNA_00963 organic hydroperoxide resistance protein YP_002886924.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ent:Ent638_0519 MarR family transcriptional regulator YP_002886925.1 PFAM: SCP-like extracellular; KEGG: bcy:Bcer98_1016 hypothetical protein YP_002886926.1 PFAM: NHL repeat containing protein; KEGG: scl:sce2636 hypothetical protein YP_002886927.1 PFAM: glutathione peroxidase; KEGG: saz:Sama_1080 glutathione peroxidase YP_002886928.1 PFAM: VanZ family protein; KEGG: bcy:Bcer98_3778 hypothetical protein YP_002886929.1 PFAM: peptidase M23; KEGG: bha:BH3600 cell wall-binding protein YP_002886931.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS3342 acetyltransferase YP_002886932.1 PFAM: sodium:dicarboxylate symporter; KEGG: ppr:PBPRA0555 sodium:dicarboxylate symporter YP_002886933.1 KEGG: bsu:BSU28610 hypothetical protein YP_002886934.1 PFAM: Colicin V production protein; KEGG: bha:BH3108 hypothetical protein YP_002886935.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: bcz:BCZK4297 hypothetical protein YP_002886936.1 KEGG: bha:BH3106 recombination and DNA strand exchange inhibitor protein; TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2 YP_002886937.1 PFAM: protein of unknown function DUF350; KEGG: bha:BH3105 hypothetical protein YP_002886938.1 KEGG: sat:SYN_00496 cytoplasmic protein YP_002886939.1 PFAM: protein of unknown function DUF214; KEGG: bha:BH0600 hypothetical protein YP_002886940.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ecg:E2348C_1209 outer membrane-specific lipoprotein transporter subunit LolD YP_002886942.1 KEGG: bcz:BCZK0838 hypothetical protein YP_002886943.1 KEGG: nis:NIS_1677 hypothetical protein YP_002886944.1 PFAM: SMC domain protein; KEGG: rde:RD1_0806 hypothetical protein YP_002886946.1 PFAM: type III restriction protein res subunit; helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: rde:RD1_0805 helicase conserved C-terminal domain YP_002886947.1 KEGG: bcz:BCZK0824 hypothetical protein YP_002886948.1 KEGG: bcz:BCZK0825 hypothetical protein YP_002886949.1 KEGG: bcz:BCZK0826 hypothetical protein YP_002886950.1 PFAM: aminotransferase class V; KEGG: bcz:BCZK0830 cysteine desulphurase YP_002886951.1 PFAM: Domain of unknown function DUF1832; KEGG: bcz:BCZK0831 hypothetical protein YP_002886952.1 TIGRFAM: DNA sulfur modification protein DndD; KEGG: bcz:BCZK0832 ATPase involved in DNA repair YP_002886953.1 TIGRFAM: sulfurtransferase DndC; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: bcz:BCZK0833 hypothetical protein YP_002886954.1 TIGRFAM: DNA sulfur modification protein DndB; DGQHR domain protein; KEGG: bcz:BCZK0834 hypothetical protein YP_002886955.1 KEGG: bcz:BCZK0827 hypothetical protein YP_002886956.1 TIGRFAM: DNA sulfur modification protein DndD; KEGG: bcz:BCZK0828 ATPase YP_002886957.1 KEGG: hypothetical protein YP_002886959.1 KEGG: ecm:EcSMS35_4003 hypothetical protein YP_002886962.1 KEGG: gur:Gura_2478 hypothetical protein YP_002886963.1 PFAM: protein of unknown function DUF1304; KEGG: hap:HAPS_0835 integral membrane protein YP_002886964.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bcz:BCZK2760 hypothetical protein YP_002886965.1 PFAM: nitroreductase; KEGG: bha:BH3859 NADH dehydrogenase YP_002886966.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bat:BAS2827 MarR family transcriptional regulator YP_002886968.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bsu:BSU30460 hypothetical protein YP_002886969.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bat:BAS3988 ABC transporter ATP-binding protein YP_002886970.1 KEGG: bca:BCE_4148 hypothetical protein YP_002886971.1 KEGG: bcz:BCZK2636 group-specific protein YP_002886972.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bcr:BCAH187_A4654 long-chain-fatty-acid--CoA ligase YP_002886973.1 PFAM: Tetracycline transcriptional regulator YsiA domain protein; regulatory protein TetR; KEGG: bha:BH3102 TetR/AcrR family transcriptional regulator YP_002886974.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: bcr:BCAH187_A4651 electron transfer flavoprotein, subunit beta YP_002886975.1 PFAM: electron transfer flavoprotein alpha/beta-subunit ; thiamine pyrophosphate protein central region; electron transfer flavoprotein subunit alpha; KEGG: bsu:BSU28520 electron transfer flavoprotein (subunit alpha) YP_002886976.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bsu:BSU28500 thioredoxin YP_002886977.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002886978.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: bsu:BSU31610 monovalent cation/H+ antiporter subunit B YP_002886979.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002886980.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bsu:BSU31630 monovalent cation/H+ antiporter subunit D YP_002886981.1 PFAM: cation antiporter; KEGG: bsu:BSU31640 monovalent cation/H+ antiporter subunit E YP_002886982.1 PFAM: multiple resistance and pH regulation protein F; KEGG: bsu:BSU31650 monovalent cation/H+ antiporter subunit F YP_002886983.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: bha:BH1313 monovalent cation/H+ antiporter subunit G YP_002886984.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: pzu:PHZ_c1498 regulatory protein YP_002886985.1 KEGG: bcz:BCZK4267 excinuclease ABC subunit C; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: excinuclease ABC C subunit domain protein YP_002886986.1 PFAM: DNA polymerase beta domain protein region; KEGG: lpc:LPC_2300 hypothetical protein YP_002886987.1 KEGG: bsu:BSU28460 hypothetical protein YP_002886988.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: bha:BH3093 succinate dehydrogenase cytochrome b-558 YP_002886989.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_002886990.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_002886991.1 PFAM: thioesterase superfamily protein; KEGG: bce:BC4515 esterase YP_002886992.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: ban:BA4268 phosphocarrier protein HPr YP_002886993.1 KEGG: bcz:BCZK4236 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_002886994.1 KEGG: bsu:BSU28370 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_002886995.1 hydrolyzes non-standard nucleotides such as xanthine and inosine YP_002886996.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: bsu:BSU28350 hypothetical protein YP_002886998.1 TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type; KEGG: bha:BH3053 trigger factor YP_002886999.1 binds and unfolds substrates as part of the ClpXP protease YP_002887000.1 KEGG: bsu:BSU28200 class III heat-shock ATP-dependent Lon protease; TIGRFAM: ATP-dependent protease La; PFAM: ATPase AAA; peptidase S16 lon domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; ATPase AAA YP_002887001.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_002887002.1 PFAM: protein of unknown function UPF0118; KEGG: bsu:BSU31800 hypothetical protein YP_002887003.1 KEGG: bce:BC4473 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like YP_002887004.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_002887005.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: bcy:Bcer98_3179 uroporphyrinogen-III synthase YP_002887006.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002887007.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_002887008.1 TIGRFAM: valyl-tRNA synthetase; KEGG: bsu:BSU28090 valyl-tRNA synthetase YP_002887010.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase protein YP_002887011.1 KEGG: bcy:Bcer98_0945 hypothetical protein YP_002887012.1 PFAM: protein of unknown function UPF0061; KEGG: bca:BCE_3522 hypothetical protein YP_002887013.1 KEGG: bsu:BSU28080 folyl-polyglutamate synthetase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_002887014.1 KEGG: hpg:HPG27_268 vacuolating cytotoxin(VacA)-like protein YP_002887015.1 KEGG: xau:Xaut_1052 amidase YP_002887017.1 KEGG: aci:ACIAD3318 pilin like competence factor YP_002887018.1 KEGG: nmc:NMC0828 hypothetical protein YP_002887019.1 KEGG: scl:sce7395 secreted protein YP_002887021.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: sfu:Sfum_0117 type IV-A pilus assembly ATPase PilB YP_002887022.1 KEGG: aha:AHA_3665 twitching mobility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA YP_002887023.1 PFAM: type II secretion system protein; KEGG: sfu:Sfum_0118 type II secretion system protein YP_002887024.1 KEGG: cvi:CV_3811 general secretion pathway protein G YP_002887025.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: bsu:BSU28070 DNA-binding protein YP_002887026.1 PFAM: Fimbrial assembly family protein; KEGG: ppd:Ppro_0992 type IV pilus assembly protein PilM YP_002887028.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: bca:BCE_4546 Maf-like protein YP_002887029.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: bsu:BSU28040 DNA repair protein RadC YP_002887031.1 KEGG: ban:BA4864 hypothetical protein YP_002887033.1 functions in MreBCD complex in some organisms YP_002887034.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: bcy:Bcer98_3166 rod shape-determining protein MreC YP_002887035.1 TIGRFAM: rod shape-determining protein MreD; KEGG: bcr:BCAH187_A4584 rod shape-determining protein MreD YP_002887036.1 PFAM: septum formation inhibitor MinC; KEGG: bsu:BSU28000 septum formation inhibitor YP_002887037.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bha:BH3027 septum site-determining protein YP_002887038.1 KEGG: bcy:Bcer98_3160 ribonuclease YP_002887039.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: bha:BH3011 50S ribosomal protein L21 YP_002887040.1 PFAM: protein of unknown function DUF464; KEGG: bsu:BSU27950 hypothetical protein YP_002887041.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: ban:BA4674 50S ribosomal protein L27 YP_002887042.1 KEGG: bha:BH1212 sporulation initiation phosphoprotein YP_002887043.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; KEGG: bcy:Bcer98_3155 GTPase ObgE YP_002887044.1 PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; SMART: hypothetical protein; KEGG: pca:Pcar_2212 CBS domain-containing protein YP_002887045.1 PFAM: NUDIX hydrolase; KEGG: bca:BCE_0596 MutT/NUDIX family protein YP_002887046.1 PFAM: hypothetical protein; KEGG: bcr:BCAH187_A2149 DedA family protein YP_002887047.1 PFAM: 3H domain protein; hypothetical protein; KEGG: bcb:BCB4264_A4550 hypothetical protein YP_002887048.1 PFAM: aminotransferase class V; KEGG: bsu:BSU27880 cysteine desulfurase YP_002887049.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: bsu:BSU27870 L-aspartate oxidase YP_002887050.1 KEGG: bsu:BSU27860 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_002887051.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_002887052.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_002887053.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_002887054.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_002887055.1 KEGG: bcb:BCB4264_A4536 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase YP_002887056.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: bha:BH1229 hypothetical protein YP_002887057.1 KEGG: hypothetical protein YP_002887058.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bha:BH3863 methyl-accepting chemotaxis protein YP_002887059.1 PFAM: zinc/iron permease; KEGG: dde:Dde_3555 zinc transporter ZupT YP_002887060.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bca:BCE_4493 single-stranded-DNA-specific exonuclease RecJ YP_002887061.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_002887062.1 KEGG: bsu:BSU27600 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002887063.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_002887064.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_002887065.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bcr:BCAH187_A4535 aspartyl-tRNA synthetase YP_002887066.1 KEGG: bsu:BSU23660 hypothetical protein YP_002887067.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: bha:BH3891 ABC transporter ATP-binding protein YP_002887068.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: sme:SM_b20422 oxidoreductase protein YP_002887069.1 PFAM: protein of unknown function DUF161; KEGG: bha:BH1258 hypothetical protein YP_002887071.1 KEGG: predicted protein; TIGRFAM: cryptochrome, DASH family; PFAM: DNA photolyase FAD-binding YP_002887072.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bsu:BSU27540 hypothetical protein YP_002887073.1 PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: pca:Pcar_1103 fused recombination factor protein RarA/unknown domain-containing protein YP_002887074.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bha:BH1259 hypothetical protein YP_002887075.1 PFAM: aminotransferase class V; KEGG: bsu:BSU27510 hypothetical protein YP_002887076.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002887077.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: bat:BAS4290 TPR domain-containing protein YP_002887078.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bsu:BSU26940 hypothetical protein YP_002887080.1 KEGG: bsu:BSU27480 hypothetical protein; TIGRFAM: helicase, RecD/TraA family; SMART: ATPase AAA YP_002887081.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002887082.1 PFAM: protein of unknown function DUF965; KEGG: bsu:BSU27400 hypothetical protein YP_002887083.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: bsu:BSU27390 Holliday junction resolvase-like protein YP_002887084.1 PFAM: protein of unknown function DUF1292; KEGG: bha:BH1270 hypothetical protein YP_002887085.1 PFAM: aminodeoxychorismate lyase; KEGG: bha:BH1271 hypothetical protein YP_002887086.1 PFAM: O-methyltransferase family 3; KEGG: bsu:BSU27360 hypothetical protein YP_002887087.1 KEGG: bha:BH1275 uridine kinase; TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; SMART: ATPase AAA YP_002887088.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bha:BH1276 transcriptional elongation factor YP_002887089.1 PFAM: purine or other phosphorylase family 1; KEGG: bsu:BSU27270 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_002887090.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bcz:BCZK1071 3-oxoacyl-(acyl carrier protein) synthase III YP_002887091.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: bsu:BSU11340 3-oxoacyl-(acyl carrier protein) synthase II YP_002887092.1 PFAM: extracellular solute-binding protein family 5; KEGG: bca:BCE_1300 oligopeptide ABC transporter oligopeptide-binding protein YP_002887093.1 PFAM: extracellular solute-binding protein family 5; KEGG: bce:BC3584 oligopeptide-binding protein OppA YP_002887094.1 KEGG: bcy:Bcer98_0894 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_002887096.1 PFAM: extracellular solute-binding protein family 5; KEGG: bcy:Bcer98_2242 extracellular solute-binding protein YP_002887097.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcr:BCAH187_A1339 oligopeptide ABC transporter permease YP_002887098.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A1236 oligopeptide ABC transporter permease YP_002887099.1 KEGG: bcb:BCB4264_A1237 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002887100.1 PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: bcy:Bcer98_0900 ABC transporter-related protein YP_002887101.1 KEGG: bcy:Bcer98_3252 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002887103.1 PFAM: arsenate reductase and related; KEGG: bsu:BSU11500 transcriptional regulator Spx YP_002887104.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence YP_002887105.1 KEGG: pat:Patl_4135 hypothetical protein YP_002887106.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hch:HCH_02562 short-chain alcohol dehydrogenase-like protein YP_002887107.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) YP_002887108.1 PFAM: Competence CoiA family protein; KEGG: bca:BCE_1313 hypothetical protein YP_002887109.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: bcz:BCZK1090 oligoendopeptidase F YP_002887110.1 KEGG: bha:BH2855 hypothetical protein YP_002887111.1 PFAM: adenylate cyclase; KEGG: bcz:BCZK1093 cytosolic protein YP_002887112.1 PFAM: RelA/SpoT domain protein; KEGG: bar:GBAA1212 hypothetical protein YP_002887113.1 catalyzes the phosphorylation of NAD to NADP YP_002887114.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: bcr:BCAH187_A1360 ribosomal large subunit pseudouridine synthase, RluA family YP_002887115.1 PFAM: cell cycle protein; KEGG: bcy:Bcer98_0919 cell cycle protein YP_002887116.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bha:BH2843 enoyl-(acyl carrier protein) reductase YP_002887118.1 similar to 2'-5' RNA ligase YP_002887119.1 PFAM: phosphatidylglycerophosphatase A; KEGG: bha:BH1441 hypothetical protein YP_002887120.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pin:Ping_1883 phosphoesterase, PA-phosphatase related YP_002887124.1 KEGG: bcr:BCAH187_A2196 hypothetical protein YP_002887125.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH0699 ribosomal-protein-alanine N-acetyltransferase YP_002887126.1 PFAM: Thioesterase; KEGG: aba:Acid345_3365 alpha/beta hydrolase YP_002887127.1 PFAM: NADPH-dependent FMN reductase; KEGG: cak:Caul_1480 NADPH-dependent FMN reductase YP_002887129.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: bcy:Bcer98_1616 heat repeat-containing PBS lyase YP_002887131.1 KEGG: bha:BH2915 intracellular proteinase inhibitor YP_002887132.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_002887133.1 PFAM: Disulphide bond formation protein DsbB; KEGG: abu:Abu_1450 DsbB family disulfide bond formation protein YP_002887134.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU14140 LysR family transcriptional regulator YP_002887135.1 KEGG: bcr:BCAH187_A4100 peptidase, M20/M25/M40 family; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_002887136.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bha:BH3975 cytochrome d ubiquinol oxidase subunit I YP_002887137.1 KEGG: bha:BH3974 cytochrome d ubiquinol oxidase subunit II YP_002887138.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: bcb:BCB4264_A4081 potassium uptake protein, TrkA family YP_002887139.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: bat:BAS3885 HAD superfamily hydrolase YP_002887140.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bcr:BCAH187_A4097 RNA-metabolising metallo-beta-lactamase family protein YP_002887141.1 KEGG: tgr:Tgr7_1112 hypothetical protein YP_002887142.1 PFAM: protein of unknown function DUF915 hydrolase family protein; KEGG: vsp:VS_2122 hypothetical protein YP_002887143.1 KEGG: bce:BC3974 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_002887144.1 KEGG: bha:BH2655 pyruvate dehydrogenase E1 (lipoamide) subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component YP_002887145.1 PFAM: transketolase central region; transketolase domain protein; KEGG: bha:BH2654 pyruvate dehydrogenase E1 (lipoamide) subunit beta YP_002887146.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: bha:BH2653 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_002887147.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bcy:Bcer98_2671 dihydrolipoamide dehydrogenase YP_002887148.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_5759 aminoglycoside acetyltransferase (6') type I YP_002887149.1 KEGG: bcb:BCB4264_A4070 hypothetical protein YP_002887150.1 PFAM: Orn/Lys/Arg decarboxylase major region; DegT/DnrJ/EryC1/StrS aminotransferase; Orn/Lys/Arg decarboxylase domain protein; KEGG: bat:BAS3874 lysine decarboxylase YP_002887151.1 PFAM: protein of unknown function UPF0223; KEGG: bsu:BSU14640 hypothetical protein YP_002887152.1 KEGG: bha:BH2636 hypothetical protein YP_002887153.1 PFAM: inositol monophosphatase; GCN5-related N-acetyltransferase; KEGG: bsu:BSU14670 hypothetical protein YP_002887155.1 TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: bcy:Bcer98_2658 GTP-binding protein TypA YP_002887156.1 KEGG: bsu:BSU14780 hypothetical protein YP_002887157.1 KEGG: bsu:BSU14790 hypothetical protein YP_002887158.1 KEGG: bcy:Bcer98_2654 hypothetical protein YP_002887159.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: bcb:BCB4264_A4054 PhoH family protein YP_002887160.1 PFAM: major facilitator superfamily MFS_1; KEGG: ses:SARI_01844 drug efflux system protein MdtG YP_002887161.1 KEGG: bha:BH2628 hypothetical protein YP_002887162.1 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein YP_002887163.1 PFAM: cell cycle protein; KEGG: bsu:BSU14850 cell-division protein YP_002887164.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate YP_002887165.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: aci:ACIAD1182 deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding YP_002887166.1 PFAM: cytochrome oxidase assembly; KEGG: bce:BC3946 heme O monooxygenase YP_002887167.1 converts protoheme IX and farnesyl diphosphate to heme O YP_002887168.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c class I; KEGG: bcb:BCB4264_A4046 cytochrome c oxidase, subunit II YP_002887169.1 KEGG: bcr:BCAH187_A4061 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_002887170.1 PFAM: cytochrome c oxidase subunit III; KEGG: bcb:BCB4264_A4044 cytochrome c oxidase, subunit III YP_002887171.1 PFAM: cytochrome C oxidase subunit IV; KEGG: bsu:BSU14920 cytochrome caa3 oxidase (subunit IV) YP_002887172.1 KEGG: bca:BCE_3987 hypothetical protein YP_002887173.1 PFAM: protein of unknown function DUF420; KEGG: sus:Acid_4378 hypothetical protein YP_002887174.1 PFAM: electron transport protein SCO1/SenC; KEGG: ott:OTT_0941 Sco2 protein precursor YP_002887177.1 KEGG: bha:BH2606 hypothetical protein YP_002887178.1 PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; KEGG: bha:BH2598 hypothetical protein YP_002887179.1 PFAM: protein of unknown function DUF1333; KEGG: bha:BH2596 hypothetical protein YP_002887180.1 KEGG: ban:BA4142 hypothetical protein YP_002887181.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase KEGG: ban:BA4140 methyltransferase YP_002887182.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_002887183.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: bat:BAS3838 PDZ domain-containing protein YP_002887184.1 PFAM: protein of unknown function DUF795; KEGG: bsu:BSU15060 hypothetical protein YP_002887185.1 PFAM: protein of unknown function DUF177; KEGG: bcy:Bcer98_2574 hypothetical protein YP_002887186.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: bsu:BSU15080 50S ribosomal protein L32 YP_002887187.1 KEGG: bca:BCE_3966 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_002887188.1 KEGG: bha:BH2578 hypothetical protein YP_002887189.1 KEGG: bca:BCE_3965 hypothetical protein YP_002887190.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bsu:BSU15140 S-adenosyl-methyltransferase MraW YP_002887191.1 TIGRFAM: cell division protein FtsL; PFAM: septum formation initiator; KEGG: bha:BH2574 hypothetical protein YP_002887192.1 KEGG: bsu:BSU15160 penicillin-binding protein 2B; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein YP_002887193.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: bha:BH2570 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D -alanyl ligase YP_002887194.1 KEGG: bsu:BSU15190 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase family 4 YP_002887195.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_002887196.1 KEGG: bcy:Bcer98_2560 N-acetylglucosaminyl transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_002887197.1 PFAM: polypeptide-transport-associated domain protein FtsQ-type; KEGG: bsu:BSU15240 cell-division initiation protein YP_002887198.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: bha:BH2559 cell-division protein (septum formation) YP_002887199.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: bha:BH2558 cell division protein FtsZ YP_002887200.1 PFAM: protein of unknown function DUF152; KEGG: bcb:BCB4264_A4002 conserved hypothetical protein TIGR00726 YP_002887201.1 PFAM: alanine racemase domain protein; KEGG: bcb:BCB4264_A4001 conserved hypothetical protein TIGR00044 YP_002887202.1 PFAM: protein of unknown function DUF552; KEGG: bsu:BSU15390 hypothetical protein YP_002887203.1 PFAM: protein of unknown function YGGT; KEGG: bha:BH2548 hypothetical protein YP_002887204.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain-containing protein YP_002887205.1 PFAM: DivIVA family protein; KEGG: bcy:Bcer98_2545 DivIVA family protein YP_002887206.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: bcb:BCB4264_A3996 isoleucyl-tRNA synthetase YP_002887207.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_002887208.1 KEGG: bce:BC3892 ribosomal large subunit pseudouridine synthase D; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_002887209.1 PFAM: phosphoribosyltransferase; KEGG: bha:BH2541 pyrimidine regulatory protein PyrR YP_002887210.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bcy:Bcer98_2539 uracil-xanthine permease YP_002887211.1 TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: bsu:BSU15490 aspartate carbamoyltransferase catalytic subunit YP_002887212.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: bcy:Bcer98_2537 dihydroorotase YP_002887213.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: bcy:Bcer98_2536 carbamoyl phosphate synthase small subunit YP_002887214.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; MGS domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl-phosphate synthetase large chain domain protein; KEGG: bha:BH2536 carbamoyl phosphate synthase large subunit YP_002887215.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bsu:BSU15530 dihydroorotate dehydrogenase electron transfer subunit YP_002887216.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: bcb:BCB4264_A3982 dihydroorotate oxidase YP_002887217.1 KEGG: bha:BH2533 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_002887218.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bcy:Bcer98_2531 orotate phosphoribosyltransferase YP_002887220.1 PFAM: protein of unknown function DUF939; KEGG: bsu:BSU08700 hypothetical protein YP_002887221.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bsu:BSU15640 hypothetical protein YP_002887222.1 Essential for recycling GMP and indirectly, cGMP YP_002887223.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: bha:BH2511 DNA-directed RNA polymerase omega subunit YP_002887224.1 KEGG: bsu:BSU15700 hypothetical protein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_002887225.1 KEGG: bha:BH2509 primosome assembly protein PriA; TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_002887226.1 TIGRFAM: methionyl-tRNA formyltransferase; peptide deformylase; PFAM: formylmethionine deformylase; formyl transferase domain protein; KEGG: bcy:Bcer98_2518 methionyl-tRNA formyltransferase YP_002887227.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: bcy:Bcer98_2517 sun protein YP_002887228.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_002887229.1 KEGG: bcy:Bcer98_2515 protein phosphatase 2C-like protein; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein YP_002887230.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bha:BH2504 serine/threonine protein kinase YP_002887231.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: bsu:BSU15780 ribosome-associated GTPase YP_002887232.1 KEGG: bha:BH2502 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase YP_002887233.1 TIGRFAM: proton-coupled thiamine transporter YuaJ; KEGG: bsu:BSU30990 hypothetical protein YP_002887234.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: bcy:Bcer98_2511 thiamine pyrophosphokinase YP_002887235.1 required for 70S ribosome assembly YP_002887236.1 PFAM: protein of unknown function DUF322; KEGG: bcy:Bcer98_2509 hypothetical protein YP_002887237.1 PFAM: Dak phosphatase; KEGG: bha:BH2498 hypothetical protein YP_002887238.1 KEGG: bha:BH2497 L-serine dehydratase subunit beta; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, subunit beta; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein YP_002887239.1 KEGG: bsu:BSU15860 L-serine dehydratase (alpha chain); TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, subunit alpha; PFAM: serine dehydratase alpha chain YP_002887240.1 KEGG: bsu:BSU15870 ATP-dependent DNA helicase; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicase ; helicase domain protein YP_002887241.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria YP_002887242.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: bcy:Bcer98_2505 glycerol-3-phosphate acyltransferase PlsX YP_002887243.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: bsu:BSU15900 acyl-carrier-protein S-malonyltransferase YP_002887244.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bcb:BCB4264_A3950 3-oxoacyl-(acyl-carrier-protein) reductase YP_002887245.1 carries the fatty acid chain in fatty acid biosynthesis YP_002887246.1 KEGG: bcy:Bcer98_2501 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_002887247.1 KEGG: bcu:BCAH820_0450 hypothetical protein YP_002887248.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: bha:BH2487 chromosome segregation SMC protein YP_002887249.1 KEGG: bsu:BSU15950 signal recognition particle (docking protein); TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002887250.1 PFAM: helix-turn-helix protein YlxM/p13 family protein; Sigma-70 region 4 type 2; KEGG: bha:BH2485 hypothetical protein YP_002887251.1 KEGG: bsu:BSU15980 signal recognition particle-like (SRP) component; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002887252.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_002887253.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: bsu:BSU16020 16S rRNA processing protein YP_002887254.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_002887255.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: bsu:BSU16040 50S ribosomal protein L19 YP_002887256.1 KEGG: bcb:BCB4264_A3937 signal peptidase I S; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_002887257.1 PFAM: GTP-binding protein HSR1-related; KEGG: bcy:Bcer98_2490 ribosomal biogenesis GTPase YP_002887258.1 PFAM: ribonuclease HII/HIII; KEGG: ban:BA3975 ribonuclease HII YP_002887259.1 KEGG: bha:BH2474 hypothetical protein YP_002887260.1 KEGG: glo:Glov_3320 FlhB domain protein YP_002887261.1 catalyzes the interconversion of succinyl-CoA and succinate YP_002887262.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_002887263.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: dno:DNO_0154 DNA processing protein DprA YP_002887264.1 KEGG: bha:BH2467 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_002887265.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_002887266.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bha:BH2465 integrase/recombinase YP_002887267.1 heat shock protein involved in degradation of misfolded proteins YP_002887268.1 heat shock protein involved in degradation of misfolded proteins YP_002887269.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_002887270.1 TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: bsu:BSU16180 flagellar basal body rod protein FlgB YP_002887271.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bha:BH2460 flagellar basal body rod protein FlgC YP_002887272.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: bba:Bd3405 hypothetical protein YP_002887273.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_002887274.1 TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: bsu:BSU16220 flagellar motor switch protein G YP_002887275.1 KEGG: bha:BH2456 flagellar assembly protein H YP_002887276.1 KEGG: bha:BH2455 flagellum-specific ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; SMART: ATPase AAA YP_002887277.1 KEGG: bha:BH2454 flagellar biosynthesis chaperone YP_002887278.1 KEGG: bsu:BSU16260 hypothetical protein YP_002887279.1 PFAM: flagellar hook-length control protein; KEGG: bsu:BSU16270 flagellar hook-length control YP_002887280.1 PFAM: flagellar hook capping protein; KEGG: bsu:BSU16280 flagellar basal body rod modification protein YP_002887281.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: bha:BH2449 flagellar basal body rod protein FlgG YP_002887282.1 PFAM: flagellar FlbD family protein; KEGG: bha:BH2448 hypothetical protein YP_002887283.1 PFAM: flagellar basal body-associated protein FliL; KEGG: bha:BH2447 flagellar basal body-associated protein FliL YP_002887284.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation YP_002887285.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: bsu:BSU16320 flagellar motor switch protein YP_002887286.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bha:BH2444 two-component response regulator involved in modulation of flagellar YP_002887287.1 PFAM: flagellar biosynthesis protein FliO; KEGG: bha:BH2443 flagellar protein required for flagellar formation YP_002887288.1 TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: bsu:BSU16350 flagellar biosynthesis protein FliP YP_002887289.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: bsu:BSU16360 flagellar biosynthesis protein FliQ YP_002887290.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: bha:BH2440 flagellar biosynthesis protein FliR YP_002887291.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export YP_002887292.1 membrane protein involved in the flagellar export apparatus YP_002887293.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: ATPase AAA; KEGG: bha:BH2437 flagellar biosynthesis regulator FlhF YP_002887294.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bha:BH2436 hypothetical protein YP_002887295.1 PFAM: CheW domain protein; P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH2970 two-component sensor histidine kinase involved in chemotaxis YP_002887296.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: bha:BH2969 modulation of CheA activity in response to attractants (chemotaxis protein) YP_002887297.1 PFAM: CheC domain protein; KEGG: gur:Gura_0720 CheC, inhibitor of MCP methylation YP_002887298.1 stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: bha:BH2433 methylation of methyl-accepting chemotaxis protein YP_002887299.1 expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis YP_002887300.1 KEGG: similar to beta myosin heavy chain YP_002887301.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002887302.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_002887303.1 KEGG: bsu:BSU16510 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_002887304.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002887305.1 KEGG: bsu:BSU16530 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_002887306.1 PFAM: phosphatidate cytidylyltransferase; KEGG: bha:BH2422 phosphatidate cytidylyltransferase YP_002887307.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_002887308.1 KEGG: bcy:Bcer98_2472 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein YP_002887309.1 KEGG: bsu:BSU16570 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_002887310.1 KEGG: bsu:BSU16580 DNA polymerase III PolC; TIGRFAM: DNA polymerase III, subunit alpha; DNA polymerase III, epsilon subunit; PFAM: DNA polymerase III subunit alpha; exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: exonuclease; phosphoesterase PHP domain protein YP_002887311.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_002887312.1 KEGG: bha:BH2416 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein YP_002887313.1 PFAM: protein of unknown function DUF448; KEGG: bha:BH2415 hypothetical protein YP_002887314.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: bcb:BCB4264_A3912 ribosomal protein L7A family YP_002887315.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; KEGG: bcy:Bcer98_2465 translation initiation factor IF-2 YP_002887316.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: bha:BH2411 ribosome-binding factor A YP_002887317.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: bha:BH2410 tRNA pseudouridine 5S synthase YP_002887318.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: riboflavin kinase; FAD synthetase; KEGG: bcb:BCB4264_A3907 riboflavin biosynthesis protein RibF YP_002887319.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_002887320.1 KEGG: bcy:Bcer98_2459 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; KH type 1 domain protein; RNA binding S1 domain protein; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 2; SMART: RNA binding S1 domain protein; KH domain protein YP_002887321.1 PFAM: peptidase M16 domain protein; KEGG: bsu:BSU16710 mitochondrial processing peptidase-like YP_002887322.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: bcz:BCZK3673 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002887323.1 PFAM: Methicillin resistance protein; KEGG: dvm:DvMF_2928 methicillin resistance protein YP_002887324.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bsu:BSU02810 hypothetical protein YP_002887325.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bha:BH2398 hypothetical protein YP_002887326.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: bha:BH2395 hypothetical protein YP_002887327.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bha:BH2394 GntR family transcriptional regulator YP_002887328.1 PFAM: basic membrane lipoprotein; KEGG: bcz:BCZK3551 Bmp family lipoprotein YP_002887329.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcr:BCAH187_A3838 sugar ABC transporter ATP-binding protein YP_002887330.1 PFAM: inner-membrane translocator; KEGG: bsu:BSU31560 hypothetical protein YP_002887331.1 PFAM: inner-membrane translocator; KEGG: bsu:BSU31570 hypothetical protein YP_002887332.1 KEGG: bcb:BCB4264_A1538 ferredoxin YP_002887333.1 KEGG: bha:BH1606 hypothetical protein YP_002887334.1 KEGG: bsu:BSU23020 ATP-dependent DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_002887336.1 PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; SMART: regulatory protein MerR; KEGG: bcy:Bcer98_1212 MerR family transcriptional regulator YP_002887337.1 PFAM: Negative regulator of genetic competence; KEGG: bha:BH1620 adaptor protein YP_002887338.1 KEGG: bha:BH1621 D-alanyl-D-alanine ligase A; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; RimK domain protein ATP-grasp YP_002887339.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: bcb:BCB4264_A1546 glutamate dehydrogenase, NAD-specific YP_002887340.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: bcy:Bcer98_1217 hypothetical protein YP_002887341.1 PFAM: Asparaginase/glutaminase; KEGG: bcz:BCZK1377 L-asparaginase YP_002887342.1 KEGG: bha:BH1625 hypothetical protein YP_002887343.1 PFAM: type IV pilus assembly PilZ; KEGG: bsu:BSU22910 hypothetical protein YP_002887344.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: bsu:BSU22890 cytidylate kinase YP_002887345.1 KEGG: bha:BH1635 hypothetical protein; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_002887346.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: bha:BH1636 30S ribosomal protein S1 YP_002887347.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002887348.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: bha:BH1640 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002887349.1 KEGG: bha:BH1643 hypothetical protein YP_002887350.1 KEGG: bha:BH1644 hypothetical protein YP_002887351.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: bsu:BSU22790 non-specific DNA-binding protein HBsu; signal recognition particle-like (SRP) component YP_002887352.1 KEGG: bsu:BSU22760 heptaprenyl diphosphate synthase component I YP_002887353.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: bcy:Bcer98_1236 ubiquinone/menaquinone biosynthesis methyltransferase YP_002887354.1 PFAM: polyprenyl synthetase; KEGG: bsu:BSU22740 heptaprenyl diphosphate synthase component II YP_002887355.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_002887356.1 KEGG: bha:BH1655 chemotaxis protein methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_002887357.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002887358.1 PFAM: 3-dehydroquinate synthase; KEGG: bsu:BSU22700 3-dehydroquinate synthase YP_002887359.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002887360.1 KEGG: bsu:BSU22590 hypothetical protein YP_002887361.1 PFAM: Protein of unknown function UPF0302 ; conserved hypothetical protein; KEGG: bcz:BCZK1402 hypothetical protein YP_002887362.1 KEGG: bha:BH1671 hypothetical protein YP_002887363.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bsu:BSU22560 menaquinol:cytochrome c oxidoreductase (iron-sulfur subunit) YP_002887364.1 electron transport protein YP_002887365.1 PFAM: cytochrome c class I; KEGG: bsu:BSU22540 menaquinol:cytochrome c oxidoreductase (cytochrome b/c subunit) YP_002887366.1 PFAM: protein of unknown function DUF1405; KEGG: bcy:Bcer98_1249 hypothetical protein YP_002887367.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: bha:BH1677 hypothetical protein YP_002887368.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bcy:Bcer98_3092 transcription elongation factor GreA YP_002887369.1 PFAM: protein of unknown function DUF161; KEGG: bcy:Bcer98_1254 hypothetical protein YP_002887370.1 PFAM: LmbE family protein; KEGG: bcb:BCB4264_A1590 hypothetical protein YP_002887371.1 PFAM: glycosyl transferase group 1; KEGG: bcy:Bcer98_1259 glycosyl transferase group 1 YP_002887372.1 PFAM: polynucleotide adenylyltransferase region; KEGG: bcy:Bcer98_1260 tRNA CCA-pyrophosphorylase YP_002887373.1 KEGG: biotin/acetyl-CoA-carboxylase ligase; K01947 biotin-; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; hypothetical protein; biotin protein ligase domain protein YP_002887374.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002887375.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_002887376.1 KEGG: bcb:BCB4264_A1597 aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_002887377.1 unwinds DNA YP_002887378.1 KEGG: bha:BH1693 hypothetical protein YP_002887379.1 KEGG: bcb:BCB4264_A1600 hypothetical protein YP_002887380.1 PFAM: aminotransferase class I and II; KEGG: bcr:BCAH187_A1712 aspartate aminotransferase YP_002887381.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002887382.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: bcy:Bcer98_1269 primosome, DnaD subunit YP_002887383.1 KEGG: bha:BH1698 endonuclease III (DNA repair); TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein YP_002887385.1 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC YP_002887386.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bha:BH1702 penicillin-binding proteins 1A/1B YP_002887388.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: bha:BH1764 ATP-dependent RNA helicase YP_002887389.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bar:GBAA0428 prophage LambdaBa04, DNA-binding protein YP_002887390.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcz:BCZK3459 transcriptional regulator YP_002887393.1 KEGG: bce:BC1852 exonuclease SbcC YP_002887394.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bvi:Bcep1808_4541 pathogenesis-related transcriptional factor and ERF protein YP_002887395.1 KEGG: bce:BC1854 cytoplasmic protein YP_002887396.1 KEGG: bce:BC1855 chromosome segregation ATPase YP_002887399.1 PFAM: metallophosphoesterase; KEGG: bce:BC1857 exonuclease SbcD