-- dump date 20120504_144559 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 376686000001 SEQ_END SEQ_END NC_009441.1 6096872 6096872 DR NC_009441.1; contig end 6096872..6096872 Flavobacterium johnsoniae UW101 YP_001192358.1 CDS Fjoh_0001 NC_009441.1 96 1145 D TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 96..1145 Flavobacterium johnsoniae UW101 5091988 YP_001192359.1 CDS Fjoh_0002 NC_009441.1 1138 1740 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 1138..1740 Flavobacterium johnsoniae UW101 5091158 YP_001192360.1 CDS Fjoh_0003 NC_009441.1 1918 2550 D PFAM: protein of unknown function UPF0029; hypothetical protein 1918..2550 Flavobacterium johnsoniae UW101 5091159 YP_001192361.1 CDS Fjoh_0004 NC_009441.1 2582 2986 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(2582..2986) Flavobacterium johnsoniae UW101 5091160 YP_001192362.1 CDS dnaA NC_009441.1 3174 4601 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 3174..4601 Flavobacterium johnsoniae UW101 5091161 YP_001192363.1 CDS Fjoh_0006 NC_009441.1 4610 5077 D PFAM: low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 4610..5077 Flavobacterium johnsoniae UW101 5091162 YP_001192364.1 CDS Fjoh_0007 NC_009441.1 5133 5846 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 5133..5846 Flavobacterium johnsoniae UW101 5091163 YP_001192365.1 CDS Fjoh_0008 NC_009441.1 5860 6378 D hypothetical protein 5860..6378 Flavobacterium johnsoniae UW101 5091164 YP_001192366.1 CDS Fjoh_0009 NC_009441.1 6362 7489 D PFAM: aminotransferase, class I and II; class I and II aminotransferase 6362..7489 Flavobacterium johnsoniae UW101 5091165 YP_001192367.1 CDS Fjoh_0010 NC_009441.1 7564 8445 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 7564..8445 Flavobacterium johnsoniae UW101 5091166 YP_001192368.1 CDS Fjoh_0011 NC_009441.1 8709 9317 D TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; uridine kinase 8709..9317 Flavobacterium johnsoniae UW101 5091167 YP_001192369.1 CDS Fjoh_0012 NC_009441.1 9424 9756 D PFAM: Septum formation initiator; septum formation initiator 9424..9756 Flavobacterium johnsoniae UW101 5091168 YP_001192370.1 CDS Fjoh_0013 NC_009441.1 9774 11135 D methylmalonyl-CoA mutase 9774..11135 Flavobacterium johnsoniae UW101 5090995 YP_001192371.1 CDS Fjoh_0014 NC_009441.1 11178 13313 D MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 11178..13313 Flavobacterium johnsoniae UW101 5090996 YP_001192372.1 CDS Fjoh_0015 NC_009441.1 13364 14008 R hypothetical protein complement(13364..14008) Flavobacterium johnsoniae UW101 5090997 YP_001192373.1 CDS Fjoh_0016 NC_009441.1 14542 15576 R PFAM: aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(14542..15576) Flavobacterium johnsoniae UW101 5090998 YP_001192374.1 CDS Fjoh_0017 NC_009441.1 15587 16120 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(15587..16120) Flavobacterium johnsoniae UW101 5090999 YP_001192375.1 CDS Fjoh_0018 NC_009441.1 16177 16959 R PFAM: diaminopimelate epimerase; diaminopimelate epimerase complement(16177..16959) Flavobacterium johnsoniae UW101 5091000 YP_001192376.1 CDS Fjoh_0019 NC_009441.1 17134 18534 D TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 17134..18534 Flavobacterium johnsoniae UW101 5091001 YP_001192377.1 CDS Fjoh_0020 NC_009441.1 18745 20193 D catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 18745..20193 Flavobacterium johnsoniae UW101 5091002 YP_001192378.1 CDS Fjoh_0021 NC_009441.1 20255 20713 R PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator complement(20255..20713) Flavobacterium johnsoniae UW101 5091003 YP_001192379.1 CDS Fjoh_0022 NC_009441.1 20915 22033 D TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; alanine dehydrogenase 20915..22033 Flavobacterium johnsoniae UW101 5091004 YP_001192380.1 CDS Fjoh_0023 NC_009441.1 22159 23778 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(22159..23778) Flavobacterium johnsoniae UW101 5091005 YP_001192381.1 CDS thrS NC_009441.1 30377 32323 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 30377..32323 Flavobacterium johnsoniae UW101 5092205 YP_001192382.1 CDS Fjoh_0025 NC_009441.1 32505 32894 D PFAM: initiation factor 3; initiation factor 3 32505..32894 Flavobacterium johnsoniae UW101 5091007 YP_001192383.1 CDS rpmI NC_009441.1 32999 33196 D PFAM: ribosomal protein L35; 50S ribosomal protein L35 32999..33196 Flavobacterium johnsoniae UW101 5091008 YP_001192384.1 CDS rplT NC_009441.1 33382 33726 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 33382..33726 Flavobacterium johnsoniae UW101 5091009 YP_001192385.1 CDS Fjoh_0028 NC_009441.1 33849 34421 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 33849..34421 Flavobacterium johnsoniae UW101 5091010 YP_001192386.1 CDS Fjoh_0029 NC_009441.1 34500 34934 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 34500..34934 Flavobacterium johnsoniae UW101 5091011 YP_001192387.1 CDS Fjoh_0030 NC_009441.1 35107 36825 D PFAM: ATP-binding region, ATPase domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; signal transduction histidine kinase 35107..36825 Flavobacterium johnsoniae UW101 5091012 YP_001192388.1 CDS Fjoh_0031 NC_009441.1 36826 38595 D PFAM: ATP-binding region, ATPase domain protein domain protein; signal transduction histidine kinase 36826..38595 Flavobacterium johnsoniae UW101 5091013 YP_001192389.1 CDS Fjoh_0032 NC_009441.1 38597 40375 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 38597..40375 Flavobacterium johnsoniae UW101 5091014 YP_001192390.1 CDS Fjoh_0033 NC_009441.1 40386 41054 D PFAM: response regulator receiver; response regulator receiver protein 40386..41054 Flavobacterium johnsoniae UW101 5091015 YP_001192391.1 CDS Fjoh_0034 NC_009441.1 41418 42227 D PFAM: Endonuclease/exonuclease/phosphatase; SMART: deoxyribonuclease I; endonuclease/exonuclease/phosphatase 41418..42227 Flavobacterium johnsoniae UW101 5091016 YP_001192392.1 CDS Fjoh_0035 NC_009441.1 42230 43489 R hypothetical protein complement(42230..43489) Flavobacterium johnsoniae UW101 5091017 YP_001192393.1 CDS Fjoh_0036 NC_009441.1 43829 44494 R PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator complement(43829..44494) Flavobacterium johnsoniae UW101 5091018 YP_001192394.1 CDS Fjoh_0037 NC_009441.1 44594 44689 R hypothetical protein complement(44594..44689) Flavobacterium johnsoniae UW101 5091019 YP_001192395.1 CDS Fjoh_0038 NC_009441.1 44795 45385 R PFAM: histidine kinase, dimerisation and phosphoacceptor region; histidine kinase, dimerisation and phosphoacceptor region complement(44795..45385) Flavobacterium johnsoniae UW101 5091020 YP_001192396.1 CDS Fjoh_0039 NC_009441.1 45393 46043 R hypothetical protein complement(45393..46043) Flavobacterium johnsoniae UW101 5091021 YP_001192397.1 CDS Fjoh_0040 NC_009441.1 46070 46429 R hypothetical protein complement(46070..46429) Flavobacterium johnsoniae UW101 5091022 YP_001192398.1 CDS Fjoh_0041 NC_009441.1 46609 48153 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase; replicative DNA helicase complement(46609..48153) Flavobacterium johnsoniae UW101 5091023 YP_001192399.1 CDS Fjoh_0042 NC_009441.1 48295 49248 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(48295..49248) Flavobacterium johnsoniae UW101 5091024 YP_001192400.1 CDS Fjoh_0043 NC_009441.1 49361 50251 R PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein complement(49361..50251) Flavobacterium johnsoniae UW101 5091025 YP_001192401.1 CDS Fjoh_0044 NC_009441.1 50238 51326 R PFAM: permease YjgP/YjgQ family protein; YjgP/YjgQ family permease complement(50238..51326) Flavobacterium johnsoniae UW101 5091026 YP_001192402.1 CDS Fjoh_0045 NC_009441.1 51394 52524 R TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(51394..52524) Flavobacterium johnsoniae UW101 5091027 YP_001192403.1 CDS Fjoh_0046 NC_009441.1 52684 53607 D PFAM: YdjC family protein; hypothetical protein 52684..53607 Flavobacterium johnsoniae UW101 5091028 YP_001192404.1 CDS Fjoh_0047 NC_009441.1 53710 54012 D hypothetical protein 53710..54012 Flavobacterium johnsoniae UW101 5091029 YP_001192405.1 CDS Fjoh_0048 NC_009441.1 54263 55111 D PFAM: Transketolase domain protein; transketolase domain-containing protein 54263..55111 Flavobacterium johnsoniae UW101 5091030 YP_001192406.1 CDS Fjoh_0049 NC_009441.1 55185 56138 D PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 55185..56138 Flavobacterium johnsoniae UW101 5091031 YP_001192407.1 CDS Fjoh_0050 NC_009441.1 56332 57498 R hypothetical protein complement(56332..57498) Flavobacterium johnsoniae UW101 5091032 YP_001192408.1 CDS Fjoh_0051 NC_009441.1 57578 57973 D PFAM: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 57578..57973 Flavobacterium johnsoniae UW101 5091033 YP_001192409.1 CDS Fjoh_0052 NC_009441.1 58048 58548 D PFAM: phosphoribosyltransferase; phosphoribosyltransferase 58048..58548 Flavobacterium johnsoniae UW101 5091034 YP_001192410.1 CDS Fjoh_0053 NC_009441.1 58540 59058 R PFAM: shikimate kinase; shikimate kinase complement(58540..59058) Flavobacterium johnsoniae UW101 5091035 YP_001192411.1 CDS Fjoh_0054 NC_009441.1 59754 60158 D hypothetical protein 59754..60158 Flavobacterium johnsoniae UW101 5094140 YP_001192412.1 CDS Fjoh_0055 NC_009441.1 60603 61103 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 60603..61103 Flavobacterium johnsoniae UW101 5094141 YP_001192413.1 CDS Fjoh_0056 NC_009441.1 61310 62209 D PFAM: regulatory protein, MerR; MerR family transcriptional regulator 61310..62209 Flavobacterium johnsoniae UW101 5091038 YP_001192414.1 CDS Fjoh_0057 NC_009441.1 62247 63713 D TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; FAD dependent oxidoreductase; phytoene dehydrogenase-like protein 62247..63713 Flavobacterium johnsoniae UW101 5091039 YP_001192415.1 CDS Fjoh_0058 NC_009441.1 63718 64557 D PFAM: Squalene/phytoene synthase; squalene/phytoene synthase 63718..64557 Flavobacterium johnsoniae UW101 5091040 YP_001192416.1 CDS Fjoh_0059 NC_009441.1 64793 65233 D PFAM: Carotene hydroxylase; carotene hydroxylase 64793..65233 Flavobacterium johnsoniae UW101 5091041 YP_001192417.1 CDS Fjoh_0060 NC_009441.1 65265 65774 D hypothetical protein 65265..65774 Flavobacterium johnsoniae UW101 5091042 YP_001192418.1 CDS Fjoh_0061 NC_009441.1 65967 67262 D PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; deoxyribodipyrimidine photo-lyase 65967..67262 Flavobacterium johnsoniae UW101 5091043 YP_001192419.1 CDS Fjoh_0062 NC_009441.1 67426 68730 R PFAM: ABC-1 domain protein; hypothetical protein complement(67426..68730) Flavobacterium johnsoniae UW101 5091044 YP_001192420.1 CDS Fjoh_0063 NC_009441.1 68727 69389 R hypothetical protein complement(68727..69389) Flavobacterium johnsoniae UW101 5091045 YP_001192421.1 CDS Fjoh_0064 NC_009441.1 69488 70399 D PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; hypothetical protein 69488..70399 Flavobacterium johnsoniae UW101 5091046 YP_001192422.1 CDS Fjoh_0065 NC_009441.1 70404 70976 R hypothetical protein complement(70404..70976) Flavobacterium johnsoniae UW101 5091047 YP_001192423.1 CDS Fjoh_0066 NC_009441.1 71319 71714 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(71319..71714) Flavobacterium johnsoniae UW101 5090833 YP_001192424.1 CDS Fjoh_0067 NC_009441.1 71758 72306 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(71758..72306) Flavobacterium johnsoniae UW101 5090834 YP_001192425.1 CDS Fjoh_0068 NC_009441.1 72495 73868 R PFAM: protein of unknown function DUF195; hypothetical protein complement(72495..73868) Flavobacterium johnsoniae UW101 5090835 YP_001192426.1 CDS Fjoh_0069 NC_009441.1 74067 74915 D hypothetical protein 74067..74915 Flavobacterium johnsoniae UW101 5090836 YP_001192427.1 CDS Fjoh_0070 NC_009441.1 74923 75321 D hypothetical protein 74923..75321 Flavobacterium johnsoniae UW101 5090837 YP_001192428.1 CDS Fjoh_0071 NC_009441.1 75409 75924 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 75409..75924 Flavobacterium johnsoniae UW101 5090838 YP_001192429.1 CDS Fjoh_0072 NC_009441.1 75921 77897 D hypothetical protein 75921..77897 Flavobacterium johnsoniae UW101 5090839 YP_001192430.1 CDS Fjoh_0073 NC_009441.1 77940 78467 D hypothetical protein 77940..78467 Flavobacterium johnsoniae UW101 5090840 YP_001192431.1 CDS Fjoh_0074 NC_009441.1 78528 81929 R PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(78528..81929) Flavobacterium johnsoniae UW101 5090841 YP_001192432.1 CDS Fjoh_0075 NC_009441.1 82241 82993 R PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(82241..82993) Flavobacterium johnsoniae UW101 5090842 YP_001192433.1 CDS Fjoh_0076 NC_009441.1 83145 83615 R hypothetical protein complement(83145..83615) Flavobacterium johnsoniae UW101 5090843 YP_001192434.1 CDS Fjoh_0077 NC_009441.1 83941 84513 D PFAM: pseudouridine synthase; pseudouridine synthase 83941..84513 Flavobacterium johnsoniae UW101 5090844 YP_001192435.1 CDS Fjoh_0078 NC_009441.1 84535 84990 D PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 84535..84990 Flavobacterium johnsoniae UW101 5090845 YP_001192436.1 CDS Fjoh_0079 NC_009441.1 85025 85831 D hypothetical protein 85025..85831 Flavobacterium johnsoniae UW101 5090846 YP_001192437.1 CDS Fjoh_0080 NC_009441.1 85828 86604 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(85828..86604) Flavobacterium johnsoniae UW101 5090847 YP_001192438.1 CDS Fjoh_0081 NC_009441.1 86696 87109 R hypothetical protein complement(86696..87109) Flavobacterium johnsoniae UW101 5090848 YP_001192439.1 CDS Fjoh_0082 NC_009441.1 87184 88152 R PFAM: transport system permease; transport system permease complement(87184..88152) Flavobacterium johnsoniae UW101 5090849 YP_001192440.1 CDS Fjoh_0083 NC_009441.1 88214 89356 R PFAM: periplasmic binding protein; periplasmic binding protein complement(88214..89356) Flavobacterium johnsoniae UW101 5090850 YP_001192441.1 CDS Fjoh_0084 NC_009441.1 89452 89814 D hypothetical protein 89452..89814 Flavobacterium johnsoniae UW101 5090851 YP_001192442.1 CDS Fjoh_0085 NC_009441.1 89845 90222 D crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 89845..90222 Flavobacterium johnsoniae UW101 5090852 YP_001192443.1 CDS Fjoh_0086 NC_009441.1 90253 90762 D PFAM: cobalbumin biosynthesis enzyme; cobalbumin biosynthesis protein 90253..90762 Flavobacterium johnsoniae UW101 5090853 YP_001192444.1 CDS Fjoh_0087 NC_009441.1 90927 92606 D PFAM: nitroreductase; Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 90927..92606 Flavobacterium johnsoniae UW101 5090854 YP_001192445.1 CDS Fjoh_0088 NC_009441.1 92674 93105 D hypothetical protein 92674..93105 Flavobacterium johnsoniae UW101 5090855 YP_001192446.1 CDS Fjoh_0089 NC_009441.1 93316 94101 D TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase 93316..94101 Flavobacterium johnsoniae UW101 5090856 YP_001192447.1 CDS Fjoh_0090 NC_009441.1 94086 94619 D PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 94086..94619 Flavobacterium johnsoniae UW101 5090857 YP_001192448.1 CDS Fjoh_0091 NC_009441.1 94955 96778 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 94955..96778 Flavobacterium johnsoniae UW101 5090858 YP_001192449.1 CDS Fjoh_0092 NC_009441.1 96784 97851 D hypothetical protein 96784..97851 Flavobacterium johnsoniae UW101 5090859 YP_001192450.1 CDS Fjoh_0093 NC_009441.1 97909 99381 R PFAM: peptidase S41; peptidase S41 complement(97909..99381) Flavobacterium johnsoniae UW101 5090860 YP_001192451.1 CDS Fjoh_0094 NC_009441.1 99532 100041 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 99532..100041 Flavobacterium johnsoniae UW101 5090861 YP_001192452.1 CDS Fjoh_0095 NC_009441.1 100028 100483 D hypothetical protein 100028..100483 Flavobacterium johnsoniae UW101 5090862 YP_001192453.1 CDS Fjoh_0096 NC_009441.1 100500 101027 D hypothetical protein 100500..101027 Flavobacterium johnsoniae UW101 5090863 YP_001192454.1 CDS Fjoh_0097 NC_009441.1 101030 101569 D hypothetical protein 101030..101569 Flavobacterium johnsoniae UW101 5090864 YP_001192455.1 CDS Fjoh_0098 NC_009441.1 101720 102118 D PFAM: YiaAB two helix domain protein; YiaAB two helix domain-containing protein 101720..102118 Flavobacterium johnsoniae UW101 5090865 YP_001192456.1 CDS carB NC_009441.1 102192 105047 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(102192..105047) Flavobacterium johnsoniae UW101 5090866 YP_001192457.1 CDS rpmH NC_009441.1 105192 105353 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(105192..105353) Flavobacterium johnsoniae UW101 5090867 YP_001192458.1 CDS Fjoh_0101 NC_009441.1 105522 106037 D hypothetical protein 105522..106037 Flavobacterium johnsoniae UW101 5090868 YP_001192459.1 CDS Fjoh_0102 NC_009441.1 106293 106952 R hypothetical protein complement(106293..106952) Flavobacterium johnsoniae UW101 5090869 YP_001192460.1 CDS Fjoh_0103 NC_009441.1 107241 107552 D hypothetical protein 107241..107552 Flavobacterium johnsoniae UW101 5090870 YP_001192461.1 CDS Fjoh_0104 NC_009441.1 107549 108979 R TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter complement(107549..108979) Flavobacterium johnsoniae UW101 5090871 YP_001192462.1 CDS Fjoh_0105 NC_009441.1 109003 110151 R hypothetical protein complement(109003..110151) Flavobacterium johnsoniae UW101 5090872 YP_001192463.1 CDS Fjoh_0106 NC_009441.1 110380 112014 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(110380..112014) Flavobacterium johnsoniae UW101 5090873 YP_001192464.1 CDS Fjoh_0107 NC_009441.1 112335 112778 D hypothetical protein 112335..112778 Flavobacterium johnsoniae UW101 5090874 YP_001192465.1 CDS Fjoh_0108 NC_009441.1 112910 114085 R involved in lipopolysaccharide biosynthesis; eIF-2Bgamma/eIF-2Bepsilon subunits; nucleoside-diphosphate-sugar pyrophosphorylase/translation initiation factor 2B gamma/epsilon subunits-like protein complement(112910..114085) Flavobacterium johnsoniae UW101 5090875 YP_001192466.1 CDS rpmE2 NC_009441.1 114421 114675 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(114421..114675) Flavobacterium johnsoniae UW101 5090876 YP_001192467.1 CDS Fjoh_0110 NC_009441.1 114926 115456 D hypothetical protein 114926..115456 Flavobacterium johnsoniae UW101 5090877 YP_001192468.1 CDS Fjoh_0111 NC_009441.1 115466 116422 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 115466..116422 Flavobacterium johnsoniae UW101 5090878 YP_001192469.1 CDS Fjoh_0112 NC_009441.1 116535 118262 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 116535..118262 Flavobacterium johnsoniae UW101 5090879 YP_001192470.1 CDS Fjoh_0113 NC_009441.1 118381 118728 R PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator complement(118381..118728) Flavobacterium johnsoniae UW101 5090880 YP_001192471.1 CDS Fjoh_0114 NC_009441.1 118823 119428 D PFAM: nitroreductase; nitroreductase 118823..119428 Flavobacterium johnsoniae UW101 5090881 YP_001192472.1 CDS Fjoh_0115 NC_009441.1 119723 121552 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 119723..121552 Flavobacterium johnsoniae UW101 5090882 YP_001192473.1 CDS Fjoh_0116 NC_009441.1 121684 122385 D hypothetical protein 121684..122385 Flavobacterium johnsoniae UW101 5090883 YP_001192474.1 CDS Fjoh_0117 NC_009441.1 122577 123296 R hypothetical protein complement(122577..123296) Flavobacterium johnsoniae UW101 5090884 YP_001192475.1 CDS Fjoh_0118 NC_009441.1 123381 125846 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(123381..125846) Flavobacterium johnsoniae UW101 5094447 YP_001192476.1 CDS Fjoh_0119 NC_009441.1 125858 127546 R PFAM: peptidase M23B; peptidase M23B complement(125858..127546) Flavobacterium johnsoniae UW101 5094448 YP_001192477.1 CDS Fjoh_0120 NC_009441.1 127718 128008 D hypothetical protein 127718..128008 Flavobacterium johnsoniae UW101 5094449 YP_001192478.1 CDS Fjoh_0121 NC_009441.1 128013 128306 D hypothetical protein 128013..128306 Flavobacterium johnsoniae UW101 5094450 YP_001192479.1 CDS Fjoh_0122 NC_009441.1 128515 130074 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 128515..130074 Flavobacterium johnsoniae UW101 5094451 YP_001192480.1 CDS Fjoh_0123 NC_009441.1 130142 131662 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(130142..131662) Flavobacterium johnsoniae UW101 5094452 YP_001192481.1 CDS Fjoh_0124 NC_009441.1 131805 132701 R PFAM: phage integrase; phage integrase domain protein SAM domain protein; phage integrase complement(131805..132701) Flavobacterium johnsoniae UW101 5094453 YP_001192482.1 CDS Fjoh_0125 NC_009441.1 132781 133365 R hypothetical protein complement(132781..133365) Flavobacterium johnsoniae UW101 5094454 YP_001192483.1 CDS Fjoh_0126 NC_009441.1 133569 134129 R hypothetical protein complement(133569..134129) Flavobacterium johnsoniae UW101 5094455 YP_001192484.1 CDS Fjoh_0127 NC_009441.1 134411 134971 D hypothetical protein 134411..134971 Flavobacterium johnsoniae UW101 5094456 YP_001192485.1 CDS Fjoh_0128 NC_009441.1 135098 135511 D TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase, class II; 3-dehydroquinate dehydratase 135098..135511 Flavobacterium johnsoniae UW101 5094457 YP_001192486.1 CDS Fjoh_0129 NC_009441.1 135669 138158 D hypothetical protein 135669..138158 Flavobacterium johnsoniae UW101 5094458 YP_001192487.1 CDS Fjoh_0130 NC_009441.1 138330 139208 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(138330..139208) Flavobacterium johnsoniae UW101 5094459 YP_001192488.1 CDS Fjoh_0131 NC_009441.1 139275 140588 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(139275..140588) Flavobacterium johnsoniae UW101 5094460 YP_001192489.1 CDS Fjoh_0132 NC_009441.1 140772 141488 R hypothetical protein complement(140772..141488) Flavobacterium johnsoniae UW101 5094461 YP_001192490.1 CDS Fjoh_0133 NC_009441.1 141492 141788 R hypothetical protein complement(141492..141788) Flavobacterium johnsoniae UW101 5094462 YP_001192491.1 CDS Fjoh_0134 NC_009441.1 142189 143100 D esterase/lipase-like protein 142189..143100 Flavobacterium johnsoniae UW101 5094463 YP_001192492.1 CDS Fjoh_0135 NC_009441.1 143250 143504 D hypothetical protein 143250..143504 Flavobacterium johnsoniae UW101 5094464 YP_001192493.1 CDS Fjoh_0136 NC_009441.1 143517 144071 D ATPase-like protein 143517..144071 Flavobacterium johnsoniae UW101 5094465 YP_001192494.1 CDS Fjoh_0137 NC_009441.1 144138 146033 D TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ 144138..146033 Flavobacterium johnsoniae UW101 5094466 YP_001192495.1 CDS fmt NC_009441.1 146033 146980 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 146033..146980 Flavobacterium johnsoniae UW101 5094467 YP_001192496.1 CDS Fjoh_0139 NC_009441.1 147161 147433 D PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 147161..147433 Flavobacterium johnsoniae UW101 5094468 YP_001192497.1 CDS Fjoh_0140 NC_009441.1 147494 148123 D PFAM: protein of unknown function DUF179; hypothetical protein 147494..148123 Flavobacterium johnsoniae UW101 5094469 YP_001192498.1 CDS Fjoh_0141 NC_009441.1 148120 148956 R PFAM: aminotransferase, class IV; aminotransferase, class IV complement(148120..148956) Flavobacterium johnsoniae UW101 5094470 YP_001192499.1 CDS Fjoh_0142 NC_009441.1 149011 149403 R hypothetical protein complement(149011..149403) Flavobacterium johnsoniae UW101 5094471 YP_001192500.1 CDS Fjoh_0143 NC_009441.1 149766 150023 D hypothetical protein 149766..150023 Flavobacterium johnsoniae UW101 5094142 YP_001192501.1 CDS Fjoh_0144 NC_009441.1 150227 150595 D hypothetical protein 150227..150595 Flavobacterium johnsoniae UW101 5094473 YP_001192502.1 CDS Fjoh_0145 NC_009441.1 150614 152032 D PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator 150614..152032 Flavobacterium johnsoniae UW101 5094474 YP_001192503.1 CDS Fjoh_0146 NC_009441.1 152039 152521 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 152039..152521 Flavobacterium johnsoniae UW101 5094475 YP_001192504.1 CDS Fjoh_0147 NC_009441.1 152756 153277 D PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 152756..153277 Flavobacterium johnsoniae UW101 5094476 YP_001192505.1 CDS Fjoh_0148 NC_009441.1 153286 153534 D hypothetical protein 153286..153534 Flavobacterium johnsoniae UW101 5094477 YP_001192506.1 CDS Fjoh_0149 NC_009441.1 153546 154388 D PFAM: FecR protein; FecR anti-FecI sigma factor 153546..154388 Flavobacterium johnsoniae UW101 5094478 YP_001192507.1 CDS Fjoh_0150 NC_009441.1 154489 157107 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 154489..157107 Flavobacterium johnsoniae UW101 5094479 YP_001192508.1 CDS Fjoh_0151 NC_009441.1 157112 157954 D hypothetical protein 157112..157954 Flavobacterium johnsoniae UW101 5094480 YP_001192509.1 CDS Fjoh_0152 NC_009441.1 158042 159481 R hypothetical protein complement(158042..159481) Flavobacterium johnsoniae UW101 5094481 YP_001192510.1 CDS Fjoh_0153 NC_009441.1 159638 160678 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 159638..160678 Flavobacterium johnsoniae UW101 5094482 YP_001192511.1 CDS Fjoh_0154 NC_009441.1 160683 161330 D hypothetical protein 160683..161330 Flavobacterium johnsoniae UW101 5094483 YP_001192512.1 CDS Fjoh_0155 NC_009441.1 161333 162475 D Zn-dependent hydrolase 161333..162475 Flavobacterium johnsoniae UW101 5094484 YP_001192513.1 CDS Fjoh_0156 NC_009441.1 162482 163282 D SMART: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 162482..163282 Flavobacterium johnsoniae UW101 5094485 YP_001192514.1 CDS Fjoh_0157 NC_009441.1 163279 163821 D PFAM: bifunctional deaminase-reductase domain protein; deaminase-reductase domain-containing protein 163279..163821 Flavobacterium johnsoniae UW101 5094486 YP_001192515.1 CDS Fjoh_0158 NC_009441.1 163873 164637 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 163873..164637 Flavobacterium johnsoniae UW101 5094487 YP_001192516.1 CDS Fjoh_0159 NC_009441.1 164751 165773 R hypothetical protein complement(164751..165773) Flavobacterium johnsoniae UW101 5094488 YP_001192517.1 CDS Fjoh_0160 NC_009441.1 165970 166485 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 165970..166485 Flavobacterium johnsoniae UW101 5094489 YP_001192518.1 CDS Fjoh_0161 NC_009441.1 166537 167436 D PFAM: FecR protein; FecR anti-FecI sigma factor 166537..167436 Flavobacterium johnsoniae UW101 5094490 YP_001192519.1 CDS Fjoh_0163 NC_009441.1 170273 171175 D PFAM: Secreted repeat of unknown function; hypothetical protein 170273..171175 Flavobacterium johnsoniae UW101 5094143 YP_001192520.1 CDS Fjoh_0164 NC_009441.1 171284 171679 D hypothetical protein 171284..171679 Flavobacterium johnsoniae UW101 5094492 YP_001192521.1 CDS Fjoh_0165 NC_009441.1 171682 172524 D hypothetical protein 171682..172524 Flavobacterium johnsoniae UW101 5094493 YP_001192522.1 CDS Fjoh_0166 NC_009441.1 172536 172886 D hypothetical protein 172536..172886 Flavobacterium johnsoniae UW101 5094494 YP_001192523.1 CDS Fjoh_0167 NC_009441.1 172898 173443 D hypothetical protein 172898..173443 Flavobacterium johnsoniae UW101 5094495 YP_001192524.1 CDS Fjoh_0168 NC_009441.1 173516 174496 R PFAM: aldo/keto reductase; aldo/keto reductase complement(173516..174496) Flavobacterium johnsoniae UW101 5094496 YP_001192525.1 CDS Fjoh_0169 NC_009441.1 174676 175569 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 174676..175569 Flavobacterium johnsoniae UW101 5094497 YP_001192526.1 CDS Fjoh_0170 NC_009441.1 175574 177148 D TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; Na+/H+ antiporter 175574..177148 Flavobacterium johnsoniae UW101 5094498 YP_001192527.1 CDS Fjoh_0171 NC_009441.1 177429 178895 D PFAM: glycosidase, PH1107-related; PH1107-like glycosidase 177429..178895 Flavobacterium johnsoniae UW101 5094499 YP_001192528.1 CDS Fjoh_0172 NC_009441.1 178899 179117 D hypothetical protein 178899..179117 Flavobacterium johnsoniae UW101 5094500 YP_001192529.1 CDS Fjoh_0173 NC_009441.1 179134 179904 R PFAM: regulatory protein, LuxR; response regulator receiver protein complement(179134..179904) Flavobacterium johnsoniae UW101 5094501 YP_001192530.1 CDS Fjoh_0174 NC_009441.1 180010 180762 D hypothetical protein 180010..180762 Flavobacterium johnsoniae UW101 5094502 YP_001192531.1 CDS Fjoh_0175 NC_009441.1 180906 181679 R hypothetical protein complement(180906..181679) Flavobacterium johnsoniae UW101 5094503 YP_001192532.1 CDS Fjoh_0176 NC_009441.1 181684 182925 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(181684..182925) Flavobacterium johnsoniae UW101 5094504 YP_001192533.1 CDS Fjoh_0177 NC_009441.1 183278 183520 D hypothetical protein 183278..183520 Flavobacterium johnsoniae UW101 5094505 YP_001192534.1 CDS Fjoh_0178 NC_009441.1 184604 185008 D hypothetical protein 184604..185008 Flavobacterium johnsoniae UW101 5094506 YP_001192535.1 CDS Fjoh_0179 NC_009441.1 185414 185977 D hypothetical protein 185414..185977 Flavobacterium johnsoniae UW101 5094507 YP_001192536.1 CDS Fjoh_0180 NC_009441.1 186121 186900 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 186121..186900 Flavobacterium johnsoniae UW101 5094508 YP_001192537.1 CDS Fjoh_0181 NC_009441.1 186963 187172 D hypothetical protein 186963..187172 Flavobacterium johnsoniae UW101 5094509 YP_001192538.1 CDS Fjoh_0182 NC_009441.1 187206 187778 D PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein 187206..187778 Flavobacterium johnsoniae UW101 5094510 YP_001192539.1 CDS Fjoh_0183 NC_009441.1 187911 189479 R PFAM: Fibronectin, type III domain protein; fibronectin, type III domain-containing protein complement(187911..189479) Flavobacterium johnsoniae UW101 5094511 YP_001192540.1 CDS Fjoh_0184 NC_009441.1 189511 191325 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(189511..191325) Flavobacterium johnsoniae UW101 5094512 YP_001192541.1 CDS Fjoh_0185 NC_009441.1 191343 194585 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(191343..194585) Flavobacterium johnsoniae UW101 5094513 YP_001192542.1 CDS Fjoh_0186 NC_009441.1 195212 196378 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(195212..196378) Flavobacterium johnsoniae UW101 5094514 YP_001192543.1 CDS Fjoh_0187 NC_009441.1 196482 197315 D PFAM: helix-turn-helix- domain containing protein, AraC type; Cupin 2, conserved barrel domain protein; cupin 196482..197315 Flavobacterium johnsoniae UW101 5094515 YP_001192544.1 CDS Fjoh_0188 NC_009441.1 197388 197768 D hypothetical protein 197388..197768 Flavobacterium johnsoniae UW101 5094516 YP_001192545.1 CDS Fjoh_0189 NC_009441.1 197881 198411 D hypothetical protein 197881..198411 Flavobacterium johnsoniae UW101 5094517 YP_001192546.1 CDS Fjoh_0190 NC_009441.1 198416 198976 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 198416..198976 Flavobacterium johnsoniae UW101 5094518 YP_001192547.1 CDS Fjoh_0191 NC_009441.1 199213 201726 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase 199213..201726 Flavobacterium johnsoniae UW101 5094519 YP_001192548.1 CDS Fjoh_0192 NC_009441.1 201736 203976 D PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; multicopper oxidase, type 3 201736..203976 Flavobacterium johnsoniae UW101 5094520 YP_001192549.1 CDS Fjoh_0193 NC_009441.1 204423 204875 R hypothetical protein complement(204423..204875) Flavobacterium johnsoniae UW101 5094521 YP_001192550.1 CDS Fjoh_0194 NC_009441.1 205106 205585 D hypothetical protein 205106..205585 Flavobacterium johnsoniae UW101 5094522 YP_001192551.1 CDS Fjoh_0195 NC_009441.1 205742 206074 D PFAM: transcriptional regulator PadR family protein; PadR-like family transcriptional regulator 205742..206074 Flavobacterium johnsoniae UW101 5094523 YP_001192552.1 CDS Fjoh_0196 NC_009441.1 206078 207814 D PFAM: PspC domain protein; phage shock protein PspC 206078..207814 Flavobacterium johnsoniae UW101 5094524 YP_001192553.1 CDS Fjoh_0197 NC_009441.1 207826 208560 D hypothetical protein 207826..208560 Flavobacterium johnsoniae UW101 5094525 YP_001192554.1 CDS Fjoh_0198 NC_009441.1 208607 209479 D hypothetical protein 208607..209479 Flavobacterium johnsoniae UW101 5094526 YP_001192555.1 CDS Fjoh_0199 NC_009441.1 209629 210576 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase complement(209629..210576) Flavobacterium johnsoniae UW101 5094527 YP_001192556.1 CDS Fjoh_0200 NC_009441.1 211044 213224 R hypothetical protein complement(211044..213224) Flavobacterium johnsoniae UW101 5094144 YP_001192557.1 CDS Fjoh_0201 NC_009441.1 213436 213837 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; rare lipoprotein A 213436..213837 Flavobacterium johnsoniae UW101 5094529 YP_001192558.1 CDS Fjoh_0202 NC_009441.1 214057 214824 D PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 214057..214824 Flavobacterium johnsoniae UW101 5094530 YP_001192559.1 CDS Fjoh_0203 NC_009441.1 214830 215738 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; parB-like partition protein 214830..215738 Flavobacterium johnsoniae UW101 5094531 YP_001192560.1 CDS Fjoh_0204 NC_009441.1 215738 216298 D hypothetical protein 215738..216298 Flavobacterium johnsoniae UW101 5094532 YP_001192561.1 CDS Fjoh_0205 NC_009441.1 216337 217038 D PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 216337..217038 Flavobacterium johnsoniae UW101 5094533 YP_001192562.1 CDS Fjoh_0206 NC_009441.1 217103 218656 D TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 217103..218656 Flavobacterium johnsoniae UW101 5094534 YP_001192563.1 CDS Fjoh_0207 NC_009441.1 218744 219358 D hypothetical protein 218744..219358 Flavobacterium johnsoniae UW101 5094535 YP_001192564.1 CDS Fjoh_0208 NC_009441.1 219355 220272 R PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(219355..220272) Flavobacterium johnsoniae UW101 5094536 YP_001192565.1 CDS Fjoh_0209 NC_009441.1 220424 221287 R PFAM: Rhomboid family protein; rhomboid family protein complement(220424..221287) Flavobacterium johnsoniae UW101 5094537 YP_001192566.1 CDS Fjoh_0210 NC_009441.1 221334 222083 R PFAM: Rhomboid family protein; rhomboid family protein complement(221334..222083) Flavobacterium johnsoniae UW101 5094538 YP_001192567.1 CDS Fjoh_0211 NC_009441.1 222080 224014 R TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein, C-terminal domain protein; DNA mismatch repair protein MutL complement(222080..224014) Flavobacterium johnsoniae UW101 5094539 YP_001192568.1 CDS ribH NC_009441.1 224178 224750 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(224178..224750) Flavobacterium johnsoniae UW101 5094540 YP_001192569.1 CDS Fjoh_0213 NC_009441.1 224829 225608 R PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(224829..225608) Flavobacterium johnsoniae UW101 5094541 YP_001192570.1 CDS Fjoh_0214 NC_009441.1 225847 226926 D TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 225847..226926 Flavobacterium johnsoniae UW101 5094542 YP_001192571.1 CDS Fjoh_0215 NC_009441.1 227126 227803 D hypothetical protein 227126..227803 Flavobacterium johnsoniae UW101 5094543 YP_001192572.1 CDS Fjoh_0216 NC_009441.1 227895 228953 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 227895..228953 Flavobacterium johnsoniae UW101 5094544 YP_001192573.1 CDS Fjoh_0217 NC_009441.1 229106 230209 D PFAM: aminotransferase, class V; aminotransferase, class I and II; class I and II aminotransferase 229106..230209 Flavobacterium johnsoniae UW101 5094545 YP_001192574.1 CDS murB NC_009441.1 230382 231395 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 230382..231395 Flavobacterium johnsoniae UW101 5094546 YP_001192575.1 CDS Fjoh_0219 NC_009441.1 231435 231893 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 231435..231893 Flavobacterium johnsoniae UW101 5094547 YP_001192576.1 CDS Fjoh_0220 NC_009441.1 231904 232518 D PFAM: Negative transcriptional regulator; FMN-binding negative transcriptional regulator 231904..232518 Flavobacterium johnsoniae UW101 5094548 YP_001192577.1 CDS Fjoh_0221 NC_009441.1 232603 233709 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 232603..233709 Flavobacterium johnsoniae UW101 5094549 YP_001192578.1 CDS Fjoh_0222 NC_009441.1 233700 234251 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 233700..234251 Flavobacterium johnsoniae UW101 5094550 YP_001192579.1 CDS Fjoh_0223 NC_009441.1 234407 235237 D hypothetical protein 234407..235237 Flavobacterium johnsoniae UW101 5094551 YP_001192580.1 CDS Fjoh_0224 NC_009441.1 235426 235806 D PFAM: protein of unknown function DUF1696; hypothetical protein 235426..235806 Flavobacterium johnsoniae UW101 5091279 YP_001192581.1 CDS Fjoh_0225 NC_009441.1 235863 236735 R PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p complement(235863..236735) Flavobacterium johnsoniae UW101 5091280 YP_001192582.1 CDS Fjoh_0226 NC_009441.1 236943 237812 R PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p complement(236943..237812) Flavobacterium johnsoniae UW101 5091281 YP_001192583.1 CDS Fjoh_0227 NC_009441.1 238108 238974 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 238108..238974 Flavobacterium johnsoniae UW101 5091282 YP_001192584.1 CDS Fjoh_0228 NC_009441.1 239051 240049 D TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 239051..240049 Flavobacterium johnsoniae UW101 5091283 YP_001192585.1 CDS Fjoh_0229 NC_009441.1 240076 242250 D PFAM: TPR repeat-containing protein; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: Tetratricopeptide domain protein; histidine kinase 240076..242250 Flavobacterium johnsoniae UW101 5091284 YP_001192586.1 CDS Fjoh_0230 NC_009441.1 242264 243286 R TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(242264..243286) Flavobacterium johnsoniae UW101 5091285 YP_001192587.1 CDS Fjoh_0231 NC_009441.1 243291 243572 R TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin, Txe/YoeB; addiction module antitoxin complement(243291..243572) Flavobacterium johnsoniae UW101 5091286 YP_001192588.1 CDS Fjoh_0232 NC_009441.1 243548 243796 R hypothetical protein complement(243548..243796) Flavobacterium johnsoniae UW101 5091287 YP_001192589.1 CDS Fjoh_0233 NC_009441.1 244018 245112 D PFAM: protein of unknown function DUF34; hypothetical protein 244018..245112 Flavobacterium johnsoniae UW101 5091288 YP_001192590.1 CDS Fjoh_0234 NC_009441.1 245116 245895 D PFAM: protein of unknown function DUF164; hypothetical protein 245116..245895 Flavobacterium johnsoniae UW101 5091289 YP_001192591.1 CDS Fjoh_0235 NC_009441.1 246063 246926 D alpha/beta hydrolase 246063..246926 Flavobacterium johnsoniae UW101 5091290 YP_001192592.1 CDS Fjoh_0236 NC_009441.1 247015 247833 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase 247015..247833 Flavobacterium johnsoniae UW101 5091291 YP_001192593.1 CDS Fjoh_0237 NC_009441.1 247897 249804 R hypothetical protein complement(247897..249804) Flavobacterium johnsoniae UW101 5091292 YP_001192594.1 CDS Fjoh_0238 NC_009441.1 249947 251335 R hypothetical protein complement(249947..251335) Flavobacterium johnsoniae UW101 5091293 YP_001192595.1 CDS Fjoh_0239 NC_009441.1 251394 251684 R hypothetical protein complement(251394..251684) Flavobacterium johnsoniae UW101 5091294 YP_001192596.1 CDS Fjoh_0240 NC_009441.1 251689 252303 R hypothetical protein complement(251689..252303) Flavobacterium johnsoniae UW101 5091295 YP_001192597.1 CDS Fjoh_0241 NC_009441.1 252411 255200 R hypothetical protein complement(252411..255200) Flavobacterium johnsoniae UW101 5091296 YP_001192598.1 CDS Fjoh_0242 NC_009441.1 255587 256513 R PFAM: Mg2+ transporter protein, CorA family protein; CorA family Mg2+ transporter protein complement(255587..256513) Flavobacterium johnsoniae UW101 5091297 YP_001192599.1 CDS Fjoh_0243 NC_009441.1 256930 257817 R PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; methenyltetrahydrofolate cyclohydrolase complement(256930..257817) Flavobacterium johnsoniae UW101 5091298 YP_001192600.1 CDS Fjoh_0244 NC_009441.1 257956 259308 R TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle protein complement(257956..259308) Flavobacterium johnsoniae UW101 5091299 YP_001192601.1 CDS Fjoh_0245 NC_009441.1 259667 261349 R PFAM: membrane bound O-acyl transferase, MBOAT family protein; membrane bound O-acyl transferase, MBOAT family protein complement(259667..261349) Flavobacterium johnsoniae UW101 5091300 YP_001192602.1 CDS Fjoh_0246 NC_009441.1 261351 262772 R PFAM: lipolytic enzyme, G-D-S-L family; Peptidoglycan-binding LysM; peptidoglycan-binding LysM complement(261351..262772) Flavobacterium johnsoniae UW101 5091301 YP_001192603.1 CDS Fjoh_0247 NC_009441.1 262765 264237 R hypothetical protein complement(262765..264237) Flavobacterium johnsoniae UW101 5091302 YP_001192604.1 CDS Fjoh_0248 NC_009441.1 264603 265223 R hypothetical protein complement(264603..265223) Flavobacterium johnsoniae UW101 5091303 YP_001192605.1 CDS Fjoh_0249 NC_009441.1 265251 267317 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(265251..267317) Flavobacterium johnsoniae UW101 5091304 YP_001192606.1 CDS argS NC_009441.1 268806 270584 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(268806..270584) Flavobacterium johnsoniae UW101 5094145 YP_001192607.1 CDS Fjoh_0252 NC_009441.1 270907 273324 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 270907..273324 Flavobacterium johnsoniae UW101 5091306 YP_001192608.1 CDS Fjoh_0253 NC_009441.1 273423 274094 R PFAM: CutC family protein; CutC family protein complement(273423..274094) Flavobacterium johnsoniae UW101 5091307 YP_001192609.1 CDS Fjoh_0254 NC_009441.1 274199 274522 R PFAM: Excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C complement(274199..274522) Flavobacterium johnsoniae UW101 5091308 YP_001192610.1 CDS Fjoh_0255 NC_009441.1 274837 275844 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-ACP synthase complement(274837..275844) Flavobacterium johnsoniae UW101 5091309 YP_001192611.1 CDS Fjoh_0256 NC_009441.1 276105 276887 R hypothetical protein complement(276105..276887) Flavobacterium johnsoniae UW101 5091310 YP_001192612.1 CDS Fjoh_0257 NC_009441.1 276963 277913 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(276963..277913) Flavobacterium johnsoniae UW101 5091311 YP_001192613.1 CDS Fjoh_0258 NC_009441.1 278020 278715 R PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; OmpA/MotB domain-containing protein complement(278020..278715) Flavobacterium johnsoniae UW101 5091312 YP_001192614.1 CDS Fjoh_0259 NC_009441.1 278734 279231 R hypothetical protein complement(278734..279231) Flavobacterium johnsoniae UW101 5091313 YP_001192615.1 CDS Fjoh_0260 NC_009441.1 279436 281319 D molecular chaperone; heat shock protein 90 279436..281319 Flavobacterium johnsoniae UW101 5091314 YP_001192616.1 CDS Fjoh_0261 NC_009441.1 281523 281939 D hypothetical protein 281523..281939 Flavobacterium johnsoniae UW101 5091315 YP_001192617.1 CDS Fjoh_0262 NC_009441.1 281936 283045 D hypothetical protein 281936..283045 Flavobacterium johnsoniae UW101 5091316 YP_001192618.1 CDS Fjoh_0263 NC_009441.1 283283 284095 D hypothetical protein 283283..284095 Flavobacterium johnsoniae UW101 5091317 YP_001192619.1 CDS Fjoh_0264 NC_009441.1 284230 284994 D hypothetical protein 284230..284994 Flavobacterium johnsoniae UW101 5091318 YP_001192620.1 CDS Fjoh_0265 NC_009441.1 285574 285840 R hypothetical protein complement(285574..285840) Flavobacterium johnsoniae UW101 5094147 YP_001192621.1 CDS Fjoh_0266 NC_009441.1 285898 286866 R TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase, type I; mannose-6-phosphate isomerase complement(285898..286866) Flavobacterium johnsoniae UW101 5091320 YP_001192622.1 CDS Fjoh_0267 NC_009441.1 286930 287388 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase complement(286930..287388) Flavobacterium johnsoniae UW101 5091321 YP_001192623.1 CDS Fjoh_0268 NC_009441.1 287392 287802 R PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; 6-pyruvoyl tetrahydrobiopterin synthase complement(287392..287802) Flavobacterium johnsoniae UW101 5091322 YP_001192624.1 CDS Fjoh_0269 NC_009441.1 287824 288351 R TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase complement(287824..288351) Flavobacterium johnsoniae UW101 5091323 YP_001192625.1 CDS Fjoh_0270 NC_009441.1 288646 289200 D TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 288646..289200 Flavobacterium johnsoniae UW101 5089838 YP_001192626.1 CDS Fjoh_0271 NC_009441.1 289208 289813 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 289208..289813 Flavobacterium johnsoniae UW101 5089839 YP_001192627.1 CDS Fjoh_0272 NC_009441.1 290445 290897 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 290445..290897 Flavobacterium johnsoniae UW101 5089840 YP_001192628.1 CDS Fjoh_0273 NC_009441.1 290979 291317 D PFAM: DGPFAETKE family protein; DGPFAETKE family protein 290979..291317 Flavobacterium johnsoniae UW101 5089841 YP_001192629.1 CDS Fjoh_0274 NC_009441.1 291380 292618 D PFAM: sigma-70 region 2 domain protein; RNA polymerase ECF-subfamily sigma factor 291380..292618 Flavobacterium johnsoniae UW101 5089842 YP_001192630.1 CDS Fjoh_0275 NC_009441.1 292884 293321 R PFAM: protein of unknown function DUF306, Meta and HslJ; hypothetical protein complement(292884..293321) Flavobacterium johnsoniae UW101 5089843 YP_001192631.1 CDS Fjoh_0276 NC_009441.1 293582 294985 D PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; peptidase M24 293582..294985 Flavobacterium johnsoniae UW101 5089844 YP_001192632.1 CDS Fjoh_0277 NC_009441.1 295088 296047 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 295088..296047 Flavobacterium johnsoniae UW101 5089845 YP_001192633.1 CDS Fjoh_0278 NC_009441.1 296158 297246 R hypothetical protein complement(296158..297246) Flavobacterium johnsoniae UW101 5089846 YP_001192634.1 CDS Fjoh_0279 NC_009441.1 297320 298879 R PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase complement(297320..298879) Flavobacterium johnsoniae UW101 5089847 YP_001192635.1 CDS Fjoh_0280 NC_009441.1 299137 299376 D hypothetical protein 299137..299376 Flavobacterium johnsoniae UW101 5089848 YP_001192636.1 CDS Fjoh_0281 NC_009441.1 299475 301670 R TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ complement(299475..301670) Flavobacterium johnsoniae UW101 5089849 YP_001192637.1 CDS Fjoh_0282 NC_009441.1 301759 302724 D TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 301759..302724 Flavobacterium johnsoniae UW101 5089850 YP_001192638.1 CDS Fjoh_0283 NC_009441.1 302724 303539 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 302724..303539 Flavobacterium johnsoniae UW101 5089851 YP_001192639.1 CDS Fjoh_0284 NC_009441.1 303532 303882 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 303532..303882 Flavobacterium johnsoniae UW101 5089852 YP_001192640.1 CDS Fjoh_0285 NC_009441.1 304043 304783 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 304043..304783 Flavobacterium johnsoniae UW101 5089853 YP_001192641.1 CDS Fjoh_0286 NC_009441.1 305139 305978 R PFAM: glycoside hydrolase, family 25; glycoside hydrolase complement(305139..305978) Flavobacterium johnsoniae UW101 5089854 YP_001192642.1 CDS Fjoh_0287 NC_009441.1 305989 306756 R PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(305989..306756) Flavobacterium johnsoniae UW101 5089855 YP_001192643.1 CDS Fjoh_0288 NC_009441.1 307023 308006 D hypothetical protein 307023..308006 Flavobacterium johnsoniae UW101 5089856 YP_001192644.1 CDS Fjoh_0289 NC_009441.1 308045 309184 D hypothetical protein 308045..309184 Flavobacterium johnsoniae UW101 5089857 YP_001192645.1 CDS Fjoh_0290 NC_009441.1 309185 310579 R PFAM: sugar transferase; sugar transferase complement(309185..310579) Flavobacterium johnsoniae UW101 5089858 YP_001192646.1 CDS Fjoh_0291 NC_009441.1 310637 311986 R hypothetical protein complement(310637..311986) Flavobacterium johnsoniae UW101 5089859 YP_001192647.1 CDS Fjoh_0292 NC_009441.1 311983 313080 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(311983..313080) Flavobacterium johnsoniae UW101 5089860 YP_001192648.1 CDS Fjoh_0293 NC_009441.1 313077 314195 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(313077..314195) Flavobacterium johnsoniae UW101 5089861 YP_001192649.1 CDS Fjoh_0294 NC_009441.1 314195 314749 R Serine acetyltransferase-like protein complement(314195..314749) Flavobacterium johnsoniae UW101 5089862 YP_001192650.1 CDS Fjoh_0295 NC_009441.1 314785 315789 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(314785..315789) Flavobacterium johnsoniae UW101 5089863 YP_001192651.1 CDS Fjoh_0296 NC_009441.1 315796 316665 R hypothetical protein complement(315796..316665) Flavobacterium johnsoniae UW101 5089864 YP_001192652.1 CDS Fjoh_0297 NC_009441.1 316672 318291 R hypothetical protein complement(316672..318291) Flavobacterium johnsoniae UW101 5089865 YP_001192653.1 CDS Fjoh_0298 NC_009441.1 318310 319848 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(318310..319848) Flavobacterium johnsoniae UW101 5089866 YP_001192654.1 CDS Fjoh_0299 NC_009441.1 319845 320999 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(319845..320999) Flavobacterium johnsoniae UW101 5089867 YP_001192655.1 CDS Fjoh_0300 NC_009441.1 320999 321877 R hypothetical protein complement(320999..321877) Flavobacterium johnsoniae UW101 5089868 YP_001192656.1 CDS Fjoh_0301 NC_009441.1 321907 322788 R hypothetical protein complement(321907..322788) Flavobacterium johnsoniae UW101 5089869 YP_001192657.1 CDS Fjoh_0302 NC_009441.1 322788 324221 R PFAM: membrane bound O-acyl transferase, MBOAT family protein; membrane bound O-acyl transferase, MBOAT family protein complement(322788..324221) Flavobacterium johnsoniae UW101 5089870 YP_001192658.1 CDS Fjoh_0303 NC_009441.1 324236 325642 R hypothetical protein complement(324236..325642) Flavobacterium johnsoniae UW101 5089871 YP_001192659.1 CDS Fjoh_0304 NC_009441.1 325642 326763 R PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(325642..326763) Flavobacterium johnsoniae UW101 5089872 YP_001192660.1 CDS Fjoh_0305 NC_009441.1 326769 327812 R PFAM: N-acetylneuraminic acid synthase, N-terminal domain; SAF domain; N-acetylneuraminic acid synthase domain-containing protein complement(326769..327812) Flavobacterium johnsoniae UW101 5089873 YP_001192661.1 CDS Fjoh_0306 NC_009441.1 327835 328935 R PFAM: acyltransferase 3; acyltransferase complement(327835..328935) Flavobacterium johnsoniae UW101 5089874 YP_001192662.1 CDS Fjoh_0307 NC_009441.1 328922 329587 R PFAM: acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase complement(328922..329587) Flavobacterium johnsoniae UW101 5089875 YP_001192663.1 CDS Fjoh_0308 NC_009441.1 329587 330681 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(329587..330681) Flavobacterium johnsoniae UW101 5089876 YP_001192664.1 CDS Fjoh_0309 NC_009441.1 330711 331781 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(330711..331781) Flavobacterium johnsoniae UW101 5089877 YP_001192665.1 CDS Fjoh_0310 NC_009441.1 331781 332608 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(331781..332608) Flavobacterium johnsoniae UW101 5089878 YP_001192666.1 CDS Fjoh_0311 NC_009441.1 332644 333663 R hypothetical protein complement(332644..333663) Flavobacterium johnsoniae UW101 5089879 YP_001192667.1 CDS Fjoh_0312 NC_009441.1 333654 334796 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(333654..334796) Flavobacterium johnsoniae UW101 5089880 YP_001192668.1 CDS Fjoh_0313 NC_009441.1 334793 335698 R hypothetical protein complement(334793..335698) Flavobacterium johnsoniae UW101 5089881 YP_001192669.1 CDS Fjoh_0314 NC_009441.1 335725 336696 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(335725..336696) Flavobacterium johnsoniae UW101 5089882 YP_001192670.1 CDS Fjoh_0315 NC_009441.1 336693 337595 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(336693..337595) Flavobacterium johnsoniae UW101 5089883 YP_001192671.1 CDS Fjoh_0316 NC_009441.1 337596 338441 R hypothetical protein complement(337596..338441) Flavobacterium johnsoniae UW101 5089884 YP_001192672.1 CDS Fjoh_0317 NC_009441.1 338438 339427 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(338438..339427) Flavobacterium johnsoniae UW101 5089885 YP_001192673.1 CDS Fjoh_0318 NC_009441.1 339424 340281 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(339424..340281) Flavobacterium johnsoniae UW101 5089886 YP_001192674.1 CDS Fjoh_0319 NC_009441.1 340268 341197 R hypothetical protein complement(340268..341197) Flavobacterium johnsoniae UW101 5089887 YP_001192675.1 CDS Fjoh_0320 NC_009441.1 341200 341853 R acyl carrier protein complement(341200..341853) Flavobacterium johnsoniae UW101 5089888 YP_001192676.1 CDS Fjoh_0321 NC_009441.1 341857 342489 R PFAM: Methyltransferase type 12; type 12 methyltransferase complement(341857..342489) Flavobacterium johnsoniae UW101 5089889 YP_001192677.1 CDS Fjoh_0322 NC_009441.1 342499 343182 R hypothetical protein complement(342499..343182) Flavobacterium johnsoniae UW101 5089890 YP_001192678.1 CDS Fjoh_0323 NC_009441.1 343182 344255 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(343182..344255) Flavobacterium johnsoniae UW101 5089891 YP_001192679.1 CDS Fjoh_0324 NC_009441.1 344255 345025 R TIGRFAM: methyltransferase FkbM family; FkbM family methyltransferase complement(344255..345025) Flavobacterium johnsoniae UW101 5089525 YP_001192680.1 CDS Fjoh_0325 NC_009441.1 345026 346294 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(345026..346294) Flavobacterium johnsoniae UW101 5089526 YP_001192681.1 CDS Fjoh_0326 NC_009441.1 346382 347509 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(346382..347509) Flavobacterium johnsoniae UW101 5089527 YP_001192682.1 CDS Fjoh_0327 NC_009441.1 347563 348429 R PFAM: ABC-2 type transporter; ABC-2 type transporter complement(347563..348429) Flavobacterium johnsoniae UW101 5089528 YP_001192683.1 CDS Fjoh_0328 NC_009441.1 348576 350417 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; polysaccharide biosynthesis protein CapD complement(348576..350417) Flavobacterium johnsoniae UW101 5089529 YP_001192684.1 CDS Fjoh_0329 NC_009441.1 350690 351625 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase complement(350690..351625) Flavobacterium johnsoniae UW101 5089530 YP_001192685.1 CDS Fjoh_0330 NC_009441.1 351644 352756 R TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; GDP-mannose 4,6-dehydratase complement(351644..352756) Flavobacterium johnsoniae UW101 5089531 YP_001192686.1 CDS Fjoh_0331 NC_009441.1 352791 353666 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase complement(352791..353666) Flavobacterium johnsoniae UW101 5089532 YP_001192687.1 CDS Fjoh_0332 NC_009441.1 353699 354544 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(353699..354544) Flavobacterium johnsoniae UW101 5089533 YP_001192688.1 CDS Fjoh_0333 NC_009441.1 354544 355092 R TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(354544..355092) Flavobacterium johnsoniae UW101 5089534 YP_001192689.1 CDS Fjoh_0334 NC_009441.1 355120 356253 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(355120..356253) Flavobacterium johnsoniae UW101 5089535 YP_001192690.1 CDS Fjoh_0335 NC_009441.1 356246 356671 R hypothetical protein complement(356246..356671) Flavobacterium johnsoniae UW101 5089536 YP_001192691.1 CDS Fjoh_0336 NC_009441.1 356661 357632 R PFAM: glycosyl transferase, family 4; glycosyl transferase family protein complement(356661..357632) Flavobacterium johnsoniae UW101 5089537 YP_001192692.1 CDS Fjoh_0337 NC_009441.1 357676 358572 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(357676..358572) Flavobacterium johnsoniae UW101 5089538 YP_001192693.1 CDS Fjoh_0338 NC_009441.1 358565 359743 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(358565..359743) Flavobacterium johnsoniae UW101 5089539 YP_001192694.1 CDS Fjoh_0339 NC_009441.1 359745 360488 R hypothetical protein complement(359745..360488) Flavobacterium johnsoniae UW101 5089540 YP_001192695.1 CDS Fjoh_0340 NC_009441.1 360544 361644 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(360544..361644) Flavobacterium johnsoniae UW101 5089541 YP_001192696.1 CDS Fjoh_0341 NC_009441.1 361634 362668 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(361634..362668) Flavobacterium johnsoniae UW101 5089542 YP_001192697.1 CDS Fjoh_0342 NC_009441.1 362674 363978 R hypothetical protein complement(362674..363978) Flavobacterium johnsoniae UW101 5089543 YP_001192698.1 CDS Fjoh_0343 NC_009441.1 364138 365046 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(364138..365046) Flavobacterium johnsoniae UW101 5089544 YP_001192699.1 CDS Fjoh_0344 NC_009441.1 365050 366162 R hypothetical protein complement(365050..366162) Flavobacterium johnsoniae UW101 5089545 YP_001192700.1 CDS Fjoh_0345 NC_009441.1 366411 367817 R hypothetical protein complement(366411..367817) Flavobacterium johnsoniae UW101 5089546 YP_001192701.1 CDS Fjoh_0346 NC_009441.1 367932 368918 R PFAM: WavE lipopolysaccharide synthesis; WavE lipopolysaccharide synthesis complement(367932..368918) Flavobacterium johnsoniae UW101 5089547 YP_001192702.1 CDS Fjoh_0347 NC_009441.1 368915 369652 R PFAM: Nucleotidyl transferase; nucleotidyl transferase complement(368915..369652) Flavobacterium johnsoniae UW101 5089548 YP_001192703.1 CDS Fjoh_0348 NC_009441.1 369630 369959 R hypothetical protein complement(369630..369959) Flavobacterium johnsoniae UW101 5089549 YP_001192704.1 CDS Fjoh_0349 NC_009441.1 369969 370691 R PFAM: Nucleotidyl transferase; nucleotidyl transferase complement(369969..370691) Flavobacterium johnsoniae UW101 5089550 YP_001192705.1 CDS Fjoh_0350 NC_009441.1 370684 371310 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(370684..371310) Flavobacterium johnsoniae UW101 5089551 YP_001192706.1 CDS Fjoh_0351 NC_009441.1 371317 371946 R hypothetical protein complement(371317..371946) Flavobacterium johnsoniae UW101 5089552 YP_001192707.1 CDS Fjoh_0352 NC_009441.1 372125 373198 R PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(372125..373198) Flavobacterium johnsoniae UW101 5089553 YP_001192708.1 CDS Fjoh_0353 NC_009441.1 373206 375698 R PFAM: polysaccharide export protein; polysaccharide export protein complement(373206..375698) Flavobacterium johnsoniae UW101 5089554 YP_001192709.1 CDS Fjoh_0354 NC_009441.1 375741 376787 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; dTDP-glucose 4,6-dehydratase complement(375741..376787) Flavobacterium johnsoniae UW101 5089555 YP_001192710.1 CDS Fjoh_0355 NC_009441.1 376790 377797 R PFAM: Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase complement(376790..377797) Flavobacterium johnsoniae UW101 5089556 YP_001192711.1 CDS Fjoh_0356 NC_009441.1 377834 379123 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase complement(377834..379123) Flavobacterium johnsoniae UW101 5089557 YP_001192712.1 CDS Fjoh_0357 NC_009441.1 379416 379880 R PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; NusG antitermination factor complement(379416..379880) Flavobacterium johnsoniae UW101 5089558 YP_001192713.1 CDS Fjoh_0358 NC_009441.1 379974 381365 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase complement(379974..381365) Flavobacterium johnsoniae UW101 5089559 YP_001192714.1 CDS Fjoh_0359 NC_009441.1 381390 382373 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(381390..382373) Flavobacterium johnsoniae UW101 5089560 YP_001192715.1 CDS Fjoh_0360 NC_009441.1 382383 384830 R non-specific protein-tyrosine kinase complement(382383..384830) Flavobacterium johnsoniae UW101 5089561 YP_001192716.1 CDS Fjoh_0361 NC_009441.1 384842 385633 R PFAM: polysaccharide export protein; polysaccharide export protein complement(384842..385633) Flavobacterium johnsoniae UW101 5089562 YP_001192717.1 CDS recR NC_009441.1 385704 386324 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(385704..386324) Flavobacterium johnsoniae UW101 5089563 YP_001192718.1 CDS Fjoh_0363 NC_009441.1 386490 386858 R hypothetical protein complement(386490..386858) Flavobacterium johnsoniae UW101 5089564 YP_001192719.1 CDS Fjoh_0364 NC_009441.1 386941 387636 D PFAM: multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein 386941..387636 Flavobacterium johnsoniae UW101 5089565 YP_001192720.1 CDS Fjoh_0365 NC_009441.1 387706 388641 R pentein-type domain-containing protein complement(387706..388641) Flavobacterium johnsoniae UW101 5089566 YP_001192721.1 CDS Fjoh_0366 NC_009441.1 388724 389638 R PFAM: amidinotransferase; amidinotransferase complement(388724..389638) Flavobacterium johnsoniae UW101 5089567 YP_001192722.1 CDS Fjoh_0367 NC_009441.1 389700 390977 R TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I complement(389700..390977) Flavobacterium johnsoniae UW101 5089568 YP_001192723.1 CDS eno NC_009441.1 391131 392423 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(391131..392423) Flavobacterium johnsoniae UW101 5089569 YP_001192724.1 CDS Fjoh_0369 NC_009441.1 392526 393644 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(392526..393644) Flavobacterium johnsoniae UW101 5089570 YP_001192725.1 CDS rplQ NC_009441.1 393885 394376 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(393885..394376) Flavobacterium johnsoniae UW101 5089571 YP_001192726.1 CDS Fjoh_0371 NC_009441.1 394413 395405 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(394413..395405) Flavobacterium johnsoniae UW101 5089572 YP_001192727.1 CDS rpsD NC_009441.1 395427 396032 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(395427..396032) Flavobacterium johnsoniae UW101 5089573 YP_001192728.1 CDS Fjoh_0373 NC_009441.1 396125 396508 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(396125..396508) Flavobacterium johnsoniae UW101 5089574 YP_001192729.1 CDS rpsM NC_009441.1 396517 396891 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(396517..396891) Flavobacterium johnsoniae UW101 5089575 YP_001192730.1 CDS rpmJ NC_009441.1 396894 397010 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 complement(396894..397010) Flavobacterium johnsoniae UW101 5089576 YP_001192731.1 CDS infA NC_009441.1 397023 397238 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(397023..397238) Flavobacterium johnsoniae UW101 5089577 YP_001192732.1 CDS secY NC_009441.1 397247 398593 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(397247..398593) Flavobacterium johnsoniae UW101 5089578 YP_001192733.1 CDS rplO NC_009441.1 398607 399059 R late assembly protein; 50S ribosomal protein L15 complement(398607..399059) Flavobacterium johnsoniae UW101 5089579 YP_001192734.1 CDS rpmD NC_009441.1 399071 399253 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(399071..399253) Flavobacterium johnsoniae UW101 5093262 YP_001192735.1 CDS rpsE NC_009441.1 399265 399786 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(399265..399786) Flavobacterium johnsoniae UW101 5093263 YP_001192736.1 CDS Fjoh_0381 NC_009441.1 399793 400143 R TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 complement(399793..400143) Flavobacterium johnsoniae UW101 5093264 YP_001192737.1 CDS rplF NC_009441.1 400155 400697 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(400155..400697) Flavobacterium johnsoniae UW101 5093265 YP_001192738.1 CDS rpsH NC_009441.1 400716 401114 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(400716..401114) Flavobacterium johnsoniae UW101 5093266 YP_001192739.1 CDS rpsN NC_009441.1 401192 401461 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(401192..401461) Flavobacterium johnsoniae UW101 5093267 YP_001192740.1 CDS rplE NC_009441.1 401465 402016 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(401465..402016) Flavobacterium johnsoniae UW101 5093268 YP_001192741.1 CDS rplX NC_009441.1 402019 402333 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(402019..402333) Flavobacterium johnsoniae UW101 5093269 YP_001192742.1 CDS rplN NC_009441.1 402345 402713 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(402345..402713) Flavobacterium johnsoniae UW101 5093270 YP_001192743.1 CDS rpsQ NC_009441.1 402716 402976 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(402716..402976) Flavobacterium johnsoniae UW101 5093271 YP_001192744.1 CDS Fjoh_0389 NC_009441.1 402994 403185 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(402994..403185) Flavobacterium johnsoniae UW101 5093272 YP_001192745.1 CDS rplP NC_009441.1 403198 403623 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(403198..403623) Flavobacterium johnsoniae UW101 5093273 YP_001192746.1 CDS rpsC NC_009441.1 403643 404401 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(403643..404401) Flavobacterium johnsoniae UW101 5093274 YP_001192747.1 CDS rplV NC_009441.1 404407 404820 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(404407..404820) Flavobacterium johnsoniae UW101 5093275 YP_001192748.1 CDS rpsS NC_009441.1 404829 405107 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(404829..405107) Flavobacterium johnsoniae UW101 5093276 YP_001192749.1 CDS rplB NC_009441.1 405114 405938 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(405114..405938) Flavobacterium johnsoniae UW101 5093277 YP_001192750.1 CDS rplW NC_009441.1 405948 406238 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(405948..406238) Flavobacterium johnsoniae UW101 5093278 YP_001192751.1 CDS rplD NC_009441.1 406246 406875 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(406246..406875) Flavobacterium johnsoniae UW101 5093279 YP_001192752.1 CDS rplC NC_009441.1 406875 407492 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(406875..407492) Flavobacterium johnsoniae UW101 5093280 YP_001192753.1 CDS rpsJ NC_009441.1 407899 408204 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(407899..408204) Flavobacterium johnsoniae UW101 5093281 YP_001192754.1 CDS Fjoh_0399 NC_009441.1 408215 410371 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(408215..410371) Flavobacterium johnsoniae UW101 5093282 YP_001192755.1 CDS Fjoh_0400 NC_009441.1 410383 410859 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(410383..410859) Flavobacterium johnsoniae UW101 5093283 YP_001192756.1 CDS rpsL NC_009441.1 410884 411267 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(410884..411267) Flavobacterium johnsoniae UW101 5093284 YP_001192757.1 CDS Fjoh_0402 NC_009441.1 411451 413151 D hypothetical protein 411451..413151 Flavobacterium johnsoniae UW101 5093285 YP_001192758.1 CDS Fjoh_0403 NC_009441.1 413623 416874 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 413623..416874 Flavobacterium johnsoniae UW101 5093286 YP_001192759.1 CDS Fjoh_0404 NC_009441.1 416878 418344 D hypothetical protein 416878..418344 Flavobacterium johnsoniae UW101 5093287 YP_001192760.1 CDS Fjoh_0405 NC_009441.1 418362 419180 D hypothetical protein 418362..419180 Flavobacterium johnsoniae UW101 5093288 YP_001192761.1 CDS Fjoh_0406 NC_009441.1 419281 420015 D TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; RNA methyltransferase 419281..420015 Flavobacterium johnsoniae UW101 5093289 YP_001192762.1 CDS Fjoh_0407 NC_009441.1 420056 420856 D hypothetical protein 420056..420856 Flavobacterium johnsoniae UW101 5093290 YP_001192763.1 CDS Fjoh_0408 NC_009441.1 420859 421362 R hypothetical protein complement(420859..421362) Flavobacterium johnsoniae UW101 5093291 YP_001192764.1 CDS Fjoh_0409 NC_009441.1 421433 422197 R PFAM: Rhomboid family protein; rhomboid family protein complement(421433..422197) Flavobacterium johnsoniae UW101 5093292 YP_001192765.1 CDS Fjoh_0410 NC_009441.1 422361 423638 D PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; recombination factor protein RarA 422361..423638 Flavobacterium johnsoniae UW101 5093293 YP_001192766.1 CDS Fjoh_0411 NC_009441.1 423652 424386 R hypothetical protein complement(423652..424386) Flavobacterium johnsoniae UW101 5093294 YP_001192767.1 CDS Fjoh_0412 NC_009441.1 424389 425075 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(424389..425075) Flavobacterium johnsoniae UW101 5093295 YP_001192768.1 CDS Fjoh_0413 NC_009441.1 425079 425768 R PFAM: DNA repair protein RadC; DNA repair protein RadC complement(425079..425768) Flavobacterium johnsoniae UW101 5093296 YP_001192769.1 CDS Fjoh_0414 NC_009441.1 425965 427320 R PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; cytoplasmic peptidoglycan synthetase domain-containing protein complement(425965..427320) Flavobacterium johnsoniae UW101 5093297 YP_001192770.1 CDS Fjoh_0415 NC_009441.1 427525 433779 D PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain-containing protein 427525..433779 Flavobacterium johnsoniae UW101 5093298 YP_001192771.1 CDS Fjoh_0416 NC_009441.1 433946 436090 R hypothetical protein complement(433946..436090) Flavobacterium johnsoniae UW101 5093299 YP_001192772.1 CDS Fjoh_0417 NC_009441.1 436403 436933 D hypothetical protein 436403..436933 Flavobacterium johnsoniae UW101 5093300 YP_001192773.1 CDS obgE NC_009441.1 437051 438052 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(437051..438052) Flavobacterium johnsoniae UW101 5093301 YP_001192774.1 CDS Fjoh_0419 NC_009441.1 438195 439418 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein complement(438195..439418) Flavobacterium johnsoniae UW101 5093302 YP_001192775.1 CDS Fjoh_0420 NC_009441.1 439540 440112 R PFAM: adenylate kinase; adenylate kinase complement(439540..440112) Flavobacterium johnsoniae UW101 5093303 YP_001192776.1 CDS Fjoh_0421 NC_009441.1 440184 440714 R PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(440184..440714) Flavobacterium johnsoniae UW101 5093304 YP_001192777.1 CDS Fjoh_0422 NC_009441.1 440902 442173 D glucose/sorbosone dehydrogenase-like protein 440902..442173 Flavobacterium johnsoniae UW101 5093305 YP_001192778.1 CDS Fjoh_0423 NC_009441.1 442372 444462 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 442372..444462 Flavobacterium johnsoniae UW101 5093306 YP_001192779.1 CDS Fjoh_0424 NC_009441.1 444463 445044 D hypothetical protein 444463..445044 Flavobacterium johnsoniae UW101 5093307 YP_001192780.1 CDS Fjoh_0425 NC_009441.1 445258 446412 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 445258..446412 Flavobacterium johnsoniae UW101 5093308 YP_001192781.1 CDS Fjoh_0426 NC_009441.1 446513 446998 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 446513..446998 Flavobacterium johnsoniae UW101 5093309 YP_001192782.1 CDS Fjoh_0427 NC_009441.1 447160 447387 D hypothetical protein 447160..447387 Flavobacterium johnsoniae UW101 5093310 YP_001192783.1 CDS Fjoh_0428 NC_009441.1 447387 447674 D hypothetical protein 447387..447674 Flavobacterium johnsoniae UW101 5093311 YP_001192784.1 CDS Fjoh_0429 NC_009441.1 447711 449738 D PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; oligopeptidase A 447711..449738 Flavobacterium johnsoniae UW101 5093312 YP_001192785.1 CDS Fjoh_0430 NC_009441.1 449872 450531 D PFAM: protein of unknown function DUF218; hypothetical protein 449872..450531 Flavobacterium johnsoniae UW101 5093313 YP_001192786.1 CDS Fjoh_0431 NC_009441.1 450568 450918 R PFAM: HicB family protein; HicB family protein complement(450568..450918) Flavobacterium johnsoniae UW101 5093314 YP_001192787.1 CDS Fjoh_0432 NC_009441.1 450920 451162 R hypothetical protein complement(450920..451162) Flavobacterium johnsoniae UW101 5093315 YP_001192788.1 CDS Fjoh_0433 NC_009441.1 451357 452619 R PFAM: sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(451357..452619) Flavobacterium johnsoniae UW101 5093316 YP_001192789.1 CDS Fjoh_0434 NC_009441.1 452822 454294 R hypothetical protein complement(452822..454294) Flavobacterium johnsoniae UW101 5089948 YP_001192790.1 CDS Fjoh_0435 NC_009441.1 454436 454849 R hypothetical protein complement(454436..454849) Flavobacterium johnsoniae UW101 5089949 YP_001192791.1 CDS Fjoh_0436 NC_009441.1 455167 455535 R hypothetical protein complement(455167..455535) Flavobacterium johnsoniae UW101 5089950 YP_001192792.1 CDS Fjoh_0437 NC_009441.1 455758 456228 R hypothetical protein complement(455758..456228) Flavobacterium johnsoniae UW101 5089951 YP_001192793.1 CDS Fjoh_0438 NC_009441.1 456251 456667 R hypothetical protein complement(456251..456667) Flavobacterium johnsoniae UW101 5089952 YP_001192794.1 CDS Fjoh_0439 NC_009441.1 456972 457475 D transcriptional regulator-like protein 456972..457475 Flavobacterium johnsoniae UW101 5089953 YP_001192795.1 CDS Fjoh_0440 NC_009441.1 457536 458273 D hypothetical protein 457536..458273 Flavobacterium johnsoniae UW101 5089954 YP_001192796.1 CDS Fjoh_0441 NC_009441.1 458294 458653 D hypothetical protein 458294..458653 Flavobacterium johnsoniae UW101 5089955 YP_001192797.1 CDS Fjoh_0442 NC_009441.1 458659 459045 D hypothetical protein 458659..459045 Flavobacterium johnsoniae UW101 5089956 YP_001192798.1 CDS Fjoh_0443 NC_009441.1 459183 460088 D PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; hypothetical protein 459183..460088 Flavobacterium johnsoniae UW101 5089957 YP_001192799.1 CDS Fjoh_0444 NC_009441.1 460244 461056 R hypothetical protein complement(460244..461056) Flavobacterium johnsoniae UW101 5089958 YP_001192800.1 CDS Fjoh_0445 NC_009441.1 461280 464129 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 461280..464129 Flavobacterium johnsoniae UW101 5089959 YP_001192801.1 CDS Fjoh_0446 NC_009441.1 464517 465575 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; beta-ketoacyl-acyl-carrier-protein synthase I 464517..465575 Flavobacterium johnsoniae UW101 5089960 YP_001192802.1 CDS Fjoh_0447 NC_009441.1 465735 466262 D hypothetical protein 465735..466262 Flavobacterium johnsoniae UW101 5089961 YP_001192803.1 CDS Fjoh_0448 NC_009441.1 466351 467199 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 466351..467199 Flavobacterium johnsoniae UW101 5089962 YP_001192804.1 CDS Fjoh_0449 NC_009441.1 467279 468025 D PFAM: protein of unknown function DUF140; hypothetical protein 467279..468025 Flavobacterium johnsoniae UW101 5089963 YP_001192805.1 CDS Fjoh_0450 NC_009441.1 468025 468789 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 468025..468789 Flavobacterium johnsoniae UW101 5089964 YP_001192806.1 CDS Fjoh_0451 NC_009441.1 468887 469483 R hypothetical protein complement(468887..469483) Flavobacterium johnsoniae UW101 5089965 YP_001192807.1 CDS Fjoh_0452 NC_009441.1 469496 469768 R hypothetical protein complement(469496..469768) Flavobacterium johnsoniae UW101 5089966 YP_001192808.1 CDS Fjoh_0453 NC_009441.1 469892 470569 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(469892..470569) Flavobacterium johnsoniae UW101 5089967 YP_001192809.1 CDS Fjoh_0454 NC_009441.1 470605 471582 R PFAM: peptidase M28; peptidase M28 complement(470605..471582) Flavobacterium johnsoniae UW101 5089968 YP_001192810.1 CDS Fjoh_0455 NC_009441.1 471726 472868 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase complement(471726..472868) Flavobacterium johnsoniae UW101 5089969 YP_001192811.1 CDS Fjoh_0456 NC_009441.1 473350 473925 D hypothetical protein 473350..473925 Flavobacterium johnsoniae UW101 5089970 YP_001192812.1 CDS Fjoh_0457 NC_009441.1 474068 475294 D PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase 474068..475294 Flavobacterium johnsoniae UW101 5089971 YP_001192813.1 CDS Fjoh_0458 NC_009441.1 475622 476524 D hypothetical protein 475622..476524 Flavobacterium johnsoniae UW101 5089972 YP_001192814.1 CDS Fjoh_0459 NC_009441.1 476708 477040 R PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(476708..477040) Flavobacterium johnsoniae UW101 5089973 YP_001192815.1 CDS Fjoh_0460 NC_009441.1 477107 477799 R PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(477107..477799) Flavobacterium johnsoniae UW101 5089974 YP_001192816.1 CDS Fjoh_0461 NC_009441.1 477931 479157 D TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 477931..479157 Flavobacterium johnsoniae UW101 5089975 YP_001192817.1 CDS Fjoh_0462 NC_009441.1 479795 480442 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 479795..480442 Flavobacterium johnsoniae UW101 5094148 YP_001192818.1 CDS Fjoh_0463 NC_009441.1 480588 480947 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 480588..480947 Flavobacterium johnsoniae UW101 5089977 YP_001192819.1 CDS Fjoh_0464 NC_009441.1 481038 481499 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 481038..481499 Flavobacterium johnsoniae UW101 5089978 YP_001192820.1 CDS Fjoh_0465 NC_009441.1 481635 482051 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 481635..482051 Flavobacterium johnsoniae UW101 5089979 YP_001192821.1 CDS Fjoh_0466 NC_009441.1 482105 482467 R PFAM: regulatory protein, MerR; MerR family transcriptional regulator complement(482105..482467) Flavobacterium johnsoniae UW101 5089980 YP_001192822.1 CDS Fjoh_0467 NC_009441.1 482563 484125 R PFAM: beta-lactamase; beta-lactamase complement(482563..484125) Flavobacterium johnsoniae UW101 5089981 YP_001192823.1 CDS Fjoh_0468 NC_009441.1 484122 485492 R hypothetical protein complement(484122..485492) Flavobacterium johnsoniae UW101 5089982 YP_001192824.1 CDS Fjoh_0469 NC_009441.1 485626 486960 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(485626..486960) Flavobacterium johnsoniae UW101 5089983 YP_001192825.1 CDS Fjoh_0470 NC_009441.1 486962 488311 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(486962..488311) Flavobacterium johnsoniae UW101 5089984 YP_001192826.1 CDS Fjoh_0471 NC_009441.1 488590 489300 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 488590..489300 Flavobacterium johnsoniae UW101 5089985 YP_001192827.1 CDS Fjoh_0472 NC_009441.1 489305 491728 D PFAM: protein of unknown function DUF214; hypothetical protein 489305..491728 Flavobacterium johnsoniae UW101 5089986 YP_001192828.1 CDS Fjoh_0473 NC_009441.1 491775 494198 D PFAM: protein of unknown function DUF214; hypothetical protein 491775..494198 Flavobacterium johnsoniae UW101 5089987 YP_001192829.1 CDS Fjoh_0474 NC_009441.1 494303 495043 R PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(494303..495043) Flavobacterium johnsoniae UW101 5089988 YP_001192830.1 CDS Fjoh_0475 NC_009441.1 495122 495691 R PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(495122..495691) Flavobacterium johnsoniae UW101 5089989 YP_001192831.1 CDS Fjoh_0476 NC_009441.1 495761 496084 R hypothetical protein complement(495761..496084) Flavobacterium johnsoniae UW101 5089990 YP_001192832.1 CDS Fjoh_0477 NC_009441.1 496088 497002 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(496088..497002) Flavobacterium johnsoniae UW101 5089991 YP_001192833.1 CDS Fjoh_0478 NC_009441.1 497004 497309 R hypothetical protein complement(497004..497309) Flavobacterium johnsoniae UW101 5089992 YP_001192834.1 CDS Fjoh_0479 NC_009441.1 497321 498127 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(497321..498127) Flavobacterium johnsoniae UW101 5089993 YP_001192835.1 CDS Fjoh_0480 NC_009441.1 498232 498732 R deoxyinosine 3'endonuclease-like protein complement(498232..498732) Flavobacterium johnsoniae UW101 5089994 YP_001192836.1 CDS Fjoh_0481 NC_009441.1 498747 499310 R hypothetical protein complement(498747..499310) Flavobacterium johnsoniae UW101 5089995 YP_001192837.1 CDS Fjoh_0483 NC_009441.1 506610 507731 R PFAM: protein of unknown function DUF214; hypothetical protein complement(506610..507731) Flavobacterium johnsoniae UW101 5094154 YP_001192838.1 CDS Fjoh_0484 NC_009441.1 507955 508449 R PFAM: protein of unknown function UPF0153; hypothetical protein complement(507955..508449) Flavobacterium johnsoniae UW101 5089997 YP_001192839.1 CDS Fjoh_0485 NC_009441.1 508524 509231 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 508524..509231 Flavobacterium johnsoniae UW101 5089998 YP_001192840.1 CDS Fjoh_0486 NC_009441.1 509246 509791 D metal-dependent hydrolase 509246..509791 Flavobacterium johnsoniae UW101 5089999 YP_001192841.1 CDS Fjoh_0487 NC_009441.1 509874 510506 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(509874..510506) Flavobacterium johnsoniae UW101 5090000 YP_001192842.1 CDS Fjoh_0488 NC_009441.1 510609 512279 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(510609..512279) Flavobacterium johnsoniae UW101 5090001 YP_001192843.1 CDS Fjoh_0489 NC_009441.1 512296 513219 R phosphate ABC transporter periplasmic component-like protein complement(512296..513219) Flavobacterium johnsoniae UW101 5090002 YP_001192844.1 CDS Fjoh_0490 NC_009441.1 513449 514252 R TIGRFAM: TonB family protein; TonB family protein complement(513449..514252) Flavobacterium johnsoniae UW101 5089803 YP_001192845.1 CDS Fjoh_0491 NC_009441.1 514289 514843 R hypothetical protein complement(514289..514843) Flavobacterium johnsoniae UW101 5089804 YP_001192846.1 CDS Fjoh_0492 NC_009441.1 514863 515489 R hypothetical protein complement(514863..515489) Flavobacterium johnsoniae UW101 5089805 YP_001192847.1 CDS Fjoh_0493 NC_009441.1 515545 516369 R PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(515545..516369) Flavobacterium johnsoniae UW101 5089806 YP_001192848.1 CDS Fjoh_0494 NC_009441.1 516749 518266 D PFAM: protein of unknown function DUF853, NPT hydrolase; hypothetical protein 516749..518266 Flavobacterium johnsoniae UW101 5089807 YP_001192849.1 CDS Fjoh_0495 NC_009441.1 518338 519678 R PFAM: monooxygenase, FAD-binding; kynurenine 3-monooxygenase complement(518338..519678) Flavobacterium johnsoniae UW101 5089808 YP_001192850.1 CDS Fjoh_0496 NC_009441.1 519902 520495 D ribosomal protein N-acetylase-like protein 519902..520495 Flavobacterium johnsoniae UW101 5089809 YP_001192851.1 CDS Fjoh_0497 NC_009441.1 520570 521361 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 520570..521361 Flavobacterium johnsoniae UW101 5089810 YP_001192852.1 CDS Fjoh_0498 NC_009441.1 521438 522946 D PFAM: beta-lactamase; beta-lactamase 521438..522946 Flavobacterium johnsoniae UW101 5089811 YP_001192853.1 CDS Fjoh_0499 NC_009441.1 522975 523451 D hypothetical protein 522975..523451 Flavobacterium johnsoniae UW101 5089812 YP_001192854.1 CDS Fjoh_0500 NC_009441.1 523678 525141 D PFAM: beta-lactamase; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; beta-lactamase 523678..525141 Flavobacterium johnsoniae UW101 5089813 YP_001192855.1 CDS Fjoh_0501 NC_009441.1 525290 525739 D hypothetical protein 525290..525739 Flavobacterium johnsoniae UW101 5089814 YP_001192856.1 CDS Fjoh_0502 NC_009441.1 525898 528285 R PFAM: peptidase S45, penicillin amidase; peptidase S45, penicillin amidase complement(525898..528285) Flavobacterium johnsoniae UW101 5089815 YP_001192857.1 CDS Fjoh_0503 NC_009441.1 528401 529957 D hypothetical protein 528401..529957 Flavobacterium johnsoniae UW101 5089816 YP_001192858.1 CDS Fjoh_0504 NC_009441.1 530145 531953 D hypothetical protein 530145..531953 Flavobacterium johnsoniae UW101 5089817 YP_001192859.1 CDS Fjoh_0505 NC_009441.1 532013 532456 R hypothetical protein complement(532013..532456) Flavobacterium johnsoniae UW101 5089818 YP_001192860.1 CDS Fjoh_0506 NC_009441.1 532774 534051 R TIGRFAM: kynureninase; kynureninase complement(532774..534051) Flavobacterium johnsoniae UW101 5089819 YP_001192861.1 CDS queA NC_009441.1 534364 535413 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(534364..535413) Flavobacterium johnsoniae UW101 5089820 YP_001192862.1 CDS Fjoh_0508 NC_009441.1 535823 537052 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase complement(535823..537052) Flavobacterium johnsoniae UW101 5089821 YP_001192863.1 CDS Fjoh_0509 NC_009441.1 537187 537513 R PFAM: MazG nucleotide pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase complement(537187..537513) Flavobacterium johnsoniae UW101 5089822 YP_001192864.1 CDS Fjoh_0510 NC_009441.1 537554 539575 R hypothetical protein complement(537554..539575) Flavobacterium johnsoniae UW101 5089823 YP_001192865.1 CDS Fjoh_0511 NC_009441.1 539597 541504 R hypothetical protein complement(539597..541504) Flavobacterium johnsoniae UW101 5089824 YP_001192866.1 CDS Fjoh_0512 NC_009441.1 541558 542010 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(541558..542010) Flavobacterium johnsoniae UW101 5089825 YP_001192867.1 CDS Fjoh_0513 NC_009441.1 542104 543081 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(542104..543081) Flavobacterium johnsoniae UW101 5089826 YP_001192868.1 CDS Fjoh_0514 NC_009441.1 543342 544424 R PFAM: Chorismate mutase; DAHP synthetase I/KDSA; DAHP synthetase I/KDSA complement(543342..544424) Flavobacterium johnsoniae UW101 5089827 YP_001192869.1 CDS Fjoh_0515 NC_009441.1 544438 545292 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(544438..545292) Flavobacterium johnsoniae UW101 5089828 YP_001192870.1 CDS Fjoh_0516 NC_009441.1 545428 546573 R PFAM: aminotransferase, class I and II; class I and II aminotransferase complement(545428..546573) Flavobacterium johnsoniae UW101 5089829 YP_001192871.1 CDS Fjoh_0517 NC_009441.1 546662 547489 R PFAM: prephenate dehydratase; prephenate dehydratase complement(546662..547489) Flavobacterium johnsoniae UW101 5089830 YP_001192872.1 CDS Fjoh_0518 NC_009441.1 547962 549128 R PFAM: protein of unknown function DUF1501; hypothetical protein complement(547962..549128) Flavobacterium johnsoniae UW101 5089831 YP_001192873.1 CDS Fjoh_0519 NC_009441.1 549141 550538 R hypothetical protein complement(549141..550538) Flavobacterium johnsoniae UW101 5089832 YP_001192874.1 CDS Fjoh_0520 NC_009441.1 550799 551365 D hypothetical protein 550799..551365 Flavobacterium johnsoniae UW101 5089833 YP_001192875.1 CDS Fjoh_0521 NC_009441.1 551635 554028 R TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP-cone domain protein; Ribonucleotide reductase large subunit, N terminal domain protein; ribonucleoside-diphosphate reductase subunit alpha complement(551635..554028) Flavobacterium johnsoniae UW101 5089834 YP_001192876.1 CDS Fjoh_0522 NC_009441.1 554293 555270 R PFAM: ribonucleotide reductase; ribonucleoside-diphosphate reductase complement(554293..555270) Flavobacterium johnsoniae UW101 5089835 YP_001192877.1 CDS Fjoh_0523 NC_009441.1 555609 556178 R hypothetical protein complement(555609..556178) Flavobacterium johnsoniae UW101 5089836 YP_001192878.1 CDS Fjoh_0524 NC_009441.1 556499 557077 D PFAM: multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein 556499..557077 Flavobacterium johnsoniae UW101 5089837 YP_001192879.1 CDS Fjoh_0525 NC_009441.1 557184 557384 D hypothetical protein 557184..557384 Flavobacterium johnsoniae UW101 5089471 YP_001192880.1 CDS Fjoh_0526 NC_009441.1 557389 557994 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 557389..557994 Flavobacterium johnsoniae UW101 5089472 YP_001192881.1 CDS Fjoh_0527 NC_009441.1 558090 558407 R hypothetical protein complement(558090..558407) Flavobacterium johnsoniae UW101 5089473 YP_001192882.1 CDS Fjoh_0528 NC_009441.1 558497 558862 R hypothetical protein complement(558497..558862) Flavobacterium johnsoniae UW101 5089474 YP_001192883.1 CDS Fjoh_0529 NC_009441.1 558881 560458 R TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; carboxyl-terminal protease complement(558881..560458) Flavobacterium johnsoniae UW101 5089475 YP_001192884.1 CDS Fjoh_0530 NC_009441.1 560458 560889 R PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase complement(560458..560889) Flavobacterium johnsoniae UW101 5089476 YP_001192885.1 CDS Fjoh_0531 NC_009441.1 560895 561488 R hypothetical protein complement(560895..561488) Flavobacterium johnsoniae UW101 5089477 YP_001192886.1 CDS Fjoh_0532 NC_009441.1 561658 562089 D hypothetical protein 561658..562089 Flavobacterium johnsoniae UW101 5089478 YP_001192887.1 CDS Fjoh_0533 NC_009441.1 562256 563260 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(562256..563260) Flavobacterium johnsoniae UW101 5089479 YP_001192888.1 CDS Fjoh_0534 NC_009441.1 563432 563926 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 563432..563926 Flavobacterium johnsoniae UW101 5089480 YP_001192889.1 CDS Fjoh_0535 NC_009441.1 564103 565362 D TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase 564103..565362 Flavobacterium johnsoniae UW101 5089481 YP_001192890.1 CDS Fjoh_0536 NC_009441.1 565444 567690 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(565444..567690) Flavobacterium johnsoniae UW101 5089482 YP_001192891.1 CDS Fjoh_0537 NC_009441.1 567806 568855 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(567806..568855) Flavobacterium johnsoniae UW101 5089483 YP_001192892.1 CDS Fjoh_0538 NC_009441.1 568858 569919 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(568858..569919) Flavobacterium johnsoniae UW101 5089484 YP_001192893.1 CDS Fjoh_0539 NC_009441.1 570093 573524 D hypothetical protein 570093..573524 Flavobacterium johnsoniae UW101 5089485 YP_001192894.1 CDS Fjoh_0540 NC_009441.1 573588 574121 D hypothetical protein 573588..574121 Flavobacterium johnsoniae UW101 5089486 YP_001192895.1 CDS Fjoh_0541 NC_009441.1 574470 575540 D hypothetical protein 574470..575540 Flavobacterium johnsoniae UW101 5089487 YP_001192896.1 CDS Fjoh_0542 NC_009441.1 575543 576838 R PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P complement(575543..576838) Flavobacterium johnsoniae UW101 5089488 YP_001192897.1 CDS Fjoh_0543 NC_009441.1 577002 578087 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(577002..578087) Flavobacterium johnsoniae UW101 5089489 YP_001192898.1 CDS Fjoh_0544 NC_009441.1 578293 578976 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(578293..578976) Flavobacterium johnsoniae UW101 5089490 YP_001192899.1 CDS Fjoh_0545 NC_009441.1 579210 581978 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 579210..581978 Flavobacterium johnsoniae UW101 5089491 YP_001192900.1 CDS Fjoh_0546 NC_009441.1 582190 583368 D hypothetical protein 582190..583368 Flavobacterium johnsoniae UW101 5089492 YP_001192901.1 CDS Fjoh_0547 NC_009441.1 583476 583814 D hypothetical protein 583476..583814 Flavobacterium johnsoniae UW101 5089493 YP_001192902.1 CDS Fjoh_0548 NC_009441.1 583966 584946 D hypothetical protein 583966..584946 Flavobacterium johnsoniae UW101 5089494 YP_001192903.1 CDS Fjoh_0549 NC_009441.1 585068 586708 D hypothetical protein 585068..586708 Flavobacterium johnsoniae UW101 5089495 YP_001192904.1 CDS Fjoh_0550 NC_009441.1 586772 588067 R TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; tyrosyl-tRNA synthetase complement(586772..588067) Flavobacterium johnsoniae UW101 5089496 YP_001192905.1 CDS Fjoh_0551 NC_009441.1 588266 589267 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 588266..589267 Flavobacterium johnsoniae UW101 5089497 YP_001192906.1 CDS Fjoh_0552 NC_009441.1 589268 589747 R hypothetical protein complement(589268..589747) Flavobacterium johnsoniae UW101 5089498 YP_001192907.1 CDS Fjoh_0553 NC_009441.1 589757 591097 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(589757..591097) Flavobacterium johnsoniae UW101 5089499 YP_001192908.1 CDS Fjoh_0554 NC_009441.1 591107 591832 R PFAM: glycosyl transferase, family 2; dolichyl-phosphate beta-D-mannosyltransferase complement(591107..591832) Flavobacterium johnsoniae UW101 5089500 YP_001192909.1 CDS Fjoh_0555 NC_009441.1 591940 592608 D hypothetical protein 591940..592608 Flavobacterium johnsoniae UW101 5089501 YP_001192910.1 CDS Fjoh_0556 NC_009441.1 592623 593372 D PFAM: Uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 592623..593372 Flavobacterium johnsoniae UW101 5089502 YP_001192911.1 CDS Fjoh_0557 NC_009441.1 593517 593987 D PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator 593517..593987 Flavobacterium johnsoniae UW101 5089503 YP_001192912.1 CDS Fjoh_0558 NC_009441.1 594165 594848 R PFAM: peptidase, membrane zinc metallopeptidase; peptidase, membrane zinc metallopeptidase complement(594165..594848) Flavobacterium johnsoniae UW101 5089504 YP_001192913.1 CDS Fjoh_0559 NC_009441.1 594948 595583 R PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator complement(594948..595583) Flavobacterium johnsoniae UW101 5089505 YP_001192914.1 CDS Fjoh_0560 NC_009441.1 595576 597588 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; histidine kinase complement(595576..597588) Flavobacterium johnsoniae UW101 5089506 YP_001192915.1 CDS Fjoh_0561 NC_009441.1 597755 598162 D hypothetical protein 597755..598162 Flavobacterium johnsoniae UW101 5089507 YP_001192916.1 CDS Fjoh_0562 NC_009441.1 598238 598834 R hypothetical protein complement(598238..598834) Flavobacterium johnsoniae UW101 5089508 YP_001192917.1 CDS Fjoh_0563 NC_009441.1 598821 599294 R PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(598821..599294) Flavobacterium johnsoniae UW101 5089509 YP_001192918.1 CDS Fjoh_0564 NC_009441.1 599300 600145 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(599300..600145) Flavobacterium johnsoniae UW101 5089510 YP_001192919.1 CDS leuS NC_009441.1 600478 603342 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(600478..603342) Flavobacterium johnsoniae UW101 5089511 YP_001192920.1 CDS Fjoh_0566 NC_009441.1 603530 604126 D hypothetical protein 603530..604126 Flavobacterium johnsoniae UW101 5089512 YP_001192921.1 CDS Fjoh_0567 NC_009441.1 604369 605244 D PFAM: protein of unknown function DUF214; hypothetical protein 604369..605244 Flavobacterium johnsoniae UW101 5089513 YP_001192922.1 CDS Fjoh_0568 NC_009441.1 605329 605586 D hypothetical protein 605329..605586 Flavobacterium johnsoniae UW101 5089514 YP_001192923.1 CDS Fjoh_0569 NC_009441.1 605676 606473 D TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 605676..606473 Flavobacterium johnsoniae UW101 5089515 YP_001192924.1 CDS Fjoh_0570 NC_009441.1 606473 607162 D TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B 606473..607162 Flavobacterium johnsoniae UW101 5089516 YP_001192925.1 CDS Fjoh_0571 NC_009441.1 607581 608198 R hypothetical protein complement(607581..608198) Flavobacterium johnsoniae UW101 5089517 YP_001192926.1 CDS Fjoh_0572 NC_009441.1 608291 608824 R hypothetical protein complement(608291..608824) Flavobacterium johnsoniae UW101 5089518 YP_001192927.1 CDS Fjoh_0573 NC_009441.1 608842 609351 R hypothetical protein complement(608842..609351) Flavobacterium johnsoniae UW101 5089519 YP_001192928.1 CDS pyrH NC_009441.1 609508 610215 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 609508..610215 Flavobacterium johnsoniae UW101 5089520 YP_001192929.1 CDS frr NC_009441.1 610358 610921 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 610358..610921 Flavobacterium johnsoniae UW101 5089521 YP_001192930.1 CDS Fjoh_0576 NC_009441.1 611040 613535 D hypothetical protein 611040..613535 Flavobacterium johnsoniae UW101 5089522 YP_001192931.1 CDS Fjoh_0577 NC_009441.1 613617 614096 R PFAM: Ankyrin; ankyrin complement(613617..614096) Flavobacterium johnsoniae UW101 5089523 YP_001192932.1 CDS Fjoh_0578 NC_009441.1 614177 616447 R PFAM: sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(614177..616447) Flavobacterium johnsoniae UW101 5089524 YP_001192933.1 CDS Fjoh_0579 NC_009441.1 616561 617280 R PFAM: response regulator receiver; response regulator receiver protein complement(616561..617280) Flavobacterium johnsoniae UW101 5090885 YP_001192934.1 CDS Fjoh_0580 NC_009441.1 617243 618004 R signal transduction histidine kinase LytS complement(617243..618004) Flavobacterium johnsoniae UW101 5090886 YP_001192935.1 CDS Fjoh_0581 NC_009441.1 618225 620591 D RND efflux transporter 618225..620591 Flavobacterium johnsoniae UW101 5090887 YP_001192936.1 CDS Fjoh_0582 NC_009441.1 620625 621161 D hypothetical protein 620625..621161 Flavobacterium johnsoniae UW101 5090888 YP_001192937.1 CDS asnC NC_009441.1 621391 622836 D catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 621391..622836 Flavobacterium johnsoniae UW101 5090889 YP_001192938.1 CDS Fjoh_0584 NC_009441.1 622967 624427 D TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; RNA polymerase sigma-54 subunit RpoN 622967..624427 Flavobacterium johnsoniae UW101 5090890 YP_001192939.1 CDS Fjoh_0585 NC_009441.1 624801 625238 R hypothetical protein complement(624801..625238) Flavobacterium johnsoniae UW101 5090891 YP_001192940.1 CDS Fjoh_0586 NC_009441.1 625275 625859 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(625275..625859) Flavobacterium johnsoniae UW101 5090892 YP_001192941.1 CDS Fjoh_0587 NC_009441.1 626105 627124 D hypothetical protein 626105..627124 Flavobacterium johnsoniae UW101 5090893 YP_001192942.1 CDS Fjoh_0588 NC_009441.1 627161 627877 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 627161..627877 Flavobacterium johnsoniae UW101 5090894 YP_001192943.1 CDS Fjoh_0589 NC_009441.1 627963 628307 D hypothetical protein 627963..628307 Flavobacterium johnsoniae UW101 5090895 YP_001192944.1 CDS Fjoh_0590 NC_009441.1 628494 630200 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; single-stranded-DNA-specific exonuclease RecJ 628494..630200 Flavobacterium johnsoniae UW101 5090896 YP_001192945.1 CDS Fjoh_0591 NC_009441.1 630187 631470 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 630187..631470 Flavobacterium johnsoniae UW101 5090897 YP_001192946.1 CDS Fjoh_0592 NC_009441.1 631501 632385 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 631501..632385 Flavobacterium johnsoniae UW101 5090898 YP_001192947.1 CDS Fjoh_0593 NC_009441.1 632465 632821 D hypothetical protein 632465..632821 Flavobacterium johnsoniae UW101 5090899 YP_001192948.1 CDS Fjoh_0594 NC_009441.1 632905 634116 D hypothetical protein 632905..634116 Flavobacterium johnsoniae UW101 5090900 YP_001192949.1 CDS Fjoh_0595 NC_009441.1 634117 634860 R PFAM: metallophosphoesterase; metallophosphoesterase complement(634117..634860) Flavobacterium johnsoniae UW101 5090901 YP_001192950.1 CDS Fjoh_0596 NC_009441.1 634933 635385 R PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; 6-pyruvoyl tetrahydrobiopterin synthase complement(634933..635385) Flavobacterium johnsoniae UW101 5090902 YP_001192951.1 CDS Fjoh_0597 NC_009441.1 635418 635594 R hypothetical protein complement(635418..635594) Flavobacterium johnsoniae UW101 5090903 YP_001192952.1 CDS Fjoh_0598 NC_009441.1 635685 636449 R PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(635685..636449) Flavobacterium johnsoniae UW101 5090904 YP_001192953.1 CDS Fjoh_0599 NC_009441.1 637078 637584 D PFAM: outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 637078..637584 Flavobacterium johnsoniae UW101 5094155 YP_001192954.1 CDS Fjoh_0600 NC_009441.1 637568 638170 D hypothetical protein 637568..638170 Flavobacterium johnsoniae UW101 5090906 YP_001192955.1 CDS Fjoh_0601 NC_009441.1 638167 643740 D hypothetical protein 638167..643740 Flavobacterium johnsoniae UW101 5090907 YP_001192956.1 CDS Fjoh_0602 NC_009441.1 643740 651215 D PFAM: PKD domain containing protein; leucine-rich repeat protein; Two component regulator three Y domain protein; SMART: leucine-rich repeat-containing protein, typical subtype; two component regulator 643740..651215 Flavobacterium johnsoniae UW101 5090908 YP_001192957.1 CDS Fjoh_0603 NC_009441.1 651287 654070 D SMART: PKD domain containing protein; PKD domain-containing protein 651287..654070 Flavobacterium johnsoniae UW101 5090909 YP_001192958.1 CDS Fjoh_0604 NC_009441.1 654138 658010 D PFAM: PKD domain containing protein; leucine-rich repeat protein; von Willebrand factor, type A; SMART: leucine-rich repeat-containing protein, typical subtype; Immunoglobulin subtype; Immunoglobulin domain protein; PKD domain-containing protein 654138..658010 Flavobacterium johnsoniae UW101 5090910 YP_001192959.1 CDS Fjoh_0605 NC_009441.1 658015 658725 D hypothetical protein 658015..658725 Flavobacterium johnsoniae UW101 5090911 YP_001192960.1 CDS Fjoh_0606 NC_009441.1 658747 669735 D TIGRFAM: YD repeat protein; PFAM: Thrombospondin type 3 repeat; YD repeat-containing protein; YD repeat-containing protein 658747..669735 Flavobacterium johnsoniae UW101 5090912 YP_001192961.1 CDS Fjoh_0607 NC_009441.1 669701 670273 D hypothetical protein 669701..670273 Flavobacterium johnsoniae UW101 5090913 YP_001192962.1 CDS Fjoh_0608 NC_009441.1 670447 671493 R PFAM: phage integrase; phage integrase complement(670447..671493) Flavobacterium johnsoniae UW101 5090914 YP_001192963.1 CDS Fjoh_0609 NC_009441.1 672198 673199 R hypothetical protein complement(672198..673199) Flavobacterium johnsoniae UW101 5090915 YP_001192964.1 CDS Fjoh_0610 NC_009441.1 673473 674261 D hypothetical protein 673473..674261 Flavobacterium johnsoniae UW101 5090916 YP_001192965.1 CDS Fjoh_0611 NC_009441.1 674266 675480 D hypothetical protein 674266..675480 Flavobacterium johnsoniae UW101 5090917 YP_001192966.1 CDS Fjoh_0612 NC_009441.1 675455 675799 D hypothetical protein 675455..675799 Flavobacterium johnsoniae UW101 5090918 YP_001192967.1 CDS Fjoh_0613 NC_009441.1 675780 676280 D hypothetical protein 675780..676280 Flavobacterium johnsoniae UW101 5090919 YP_001192968.1 CDS Fjoh_0614 NC_009441.1 676280 677407 D PFAM: type II secretion system protein; type II secretion system protein 676280..677407 Flavobacterium johnsoniae UW101 5090920 YP_001192969.1 CDS Fjoh_0615 NC_009441.1 677480 677914 D hypothetical protein 677480..677914 Flavobacterium johnsoniae UW101 5090921 YP_001192970.1 CDS Fjoh_0616 NC_009441.1 677917 678396 D hypothetical protein 677917..678396 Flavobacterium johnsoniae UW101 5090922 YP_001192971.1 CDS Fjoh_0617 NC_009441.1 678400 679803 D PFAM: type II secretion system protein E; SMART: AAA ATPase; type II secretion system protein E 678400..679803 Flavobacterium johnsoniae UW101 5090923 YP_001192972.1 CDS Fjoh_0618 NC_009441.1 679808 681712 D PFAM: type II and III secretion system protein; NolW domain protein; type II and III secretion system protein 679808..681712 Flavobacterium johnsoniae UW101 5090924 YP_001192973.1 CDS Fjoh_0619 NC_009441.1 681712 682899 D hypothetical protein 681712..682899 Flavobacterium johnsoniae UW101 5090925 YP_001192974.1 CDS Fjoh_0620 NC_009441.1 682892 683416 D hypothetical protein 682892..683416 Flavobacterium johnsoniae UW101 5090926 YP_001192975.1 CDS Fjoh_0621 NC_009441.1 683400 684356 D PFAM: Fibronectin, type III domain protein; fibronectin, type III domain-containing protein 683400..684356 Flavobacterium johnsoniae UW101 5090927 YP_001192976.1 CDS Fjoh_0622 NC_009441.1 684364 684873 D hypothetical protein 684364..684873 Flavobacterium johnsoniae UW101 5090928 YP_001192977.1 CDS Fjoh_0623 NC_009441.1 685231 685674 D hypothetical protein 685231..685674 Flavobacterium johnsoniae UW101 5090929 YP_001192978.1 CDS Fjoh_0624 NC_009441.1 685671 686600 D hypothetical protein 685671..686600 Flavobacterium johnsoniae UW101 5090930 YP_001192979.1 CDS Fjoh_0625 NC_009441.1 686663 687694 D hypothetical protein 686663..687694 Flavobacterium johnsoniae UW101 5090931 YP_001192980.1 CDS Fjoh_0626 NC_009441.1 687746 688330 D hypothetical protein 687746..688330 Flavobacterium johnsoniae UW101 5090932 YP_001192981.1 CDS Fjoh_0627 NC_009441.1 688380 688949 D hypothetical protein 688380..688949 Flavobacterium johnsoniae UW101 5090933 YP_001192982.1 CDS Fjoh_0628 NC_009441.1 688968 689702 D hypothetical protein 688968..689702 Flavobacterium johnsoniae UW101 5090934 YP_001192983.1 CDS Fjoh_0629 NC_009441.1 689879 690427 D hypothetical protein 689879..690427 Flavobacterium johnsoniae UW101 5090935 YP_001192984.1 CDS Fjoh_0630 NC_009441.1 690430 691176 D hypothetical protein 690430..691176 Flavobacterium johnsoniae UW101 5090936 YP_001192985.1 CDS Fjoh_0631 NC_009441.1 691350 692510 D hypothetical protein 691350..692510 Flavobacterium johnsoniae UW101 5090937 YP_001192986.1 CDS Fjoh_0632 NC_009441.1 692638 693033 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 692638..693033 Flavobacterium johnsoniae UW101 5090938 YP_001192987.1 CDS Fjoh_0633 NC_009441.1 693724 694683 R hypothetical protein complement(693724..694683) Flavobacterium johnsoniae UW101 5090939 YP_001192988.1 CDS Fjoh_0634 NC_009441.1 694670 695455 R TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase, family 51; monofunctional biosynthetic peptidoglycan transglycosylase complement(694670..695455) Flavobacterium johnsoniae UW101 5091379 YP_001192989.1 CDS Fjoh_0635 NC_009441.1 695455 696567 R PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(695455..696567) Flavobacterium johnsoniae UW101 5091380 YP_001192990.1 CDS Fjoh_0636 NC_009441.1 696808 698709 D PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 696808..698709 Flavobacterium johnsoniae UW101 5091381 YP_001192991.1 CDS Fjoh_0637 NC_009441.1 698889 701330 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; histidine kinase 698889..701330 Flavobacterium johnsoniae UW101 5091382 YP_001192992.1 CDS Fjoh_0638 NC_009441.1 701327 702688 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(701327..702688) Flavobacterium johnsoniae UW101 5091383 YP_001192993.1 CDS Fjoh_0639 NC_009441.1 702819 703115 R hypothetical protein complement(702819..703115) Flavobacterium johnsoniae UW101 5091384 YP_001192994.1 CDS Fjoh_0640 NC_009441.1 703132 703428 R hypothetical protein complement(703132..703428) Flavobacterium johnsoniae UW101 5091385 YP_001192995.1 CDS Fjoh_0641 NC_009441.1 703447 703737 R hypothetical protein complement(703447..703737) Flavobacterium johnsoniae UW101 5091386 YP_001192996.1 CDS Fjoh_0642 NC_009441.1 703765 704061 R hypothetical protein complement(703765..704061) Flavobacterium johnsoniae UW101 5091387 YP_001192997.1 CDS Fjoh_0643 NC_009441.1 704173 704469 R hypothetical protein complement(704173..704469) Flavobacterium johnsoniae UW101 5091388 YP_001192998.1 CDS Fjoh_0644 NC_009441.1 704776 706122 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; acetyl-CoA carboxylase, biotin carboxylase complement(704776..706122) Flavobacterium johnsoniae UW101 5091389 YP_001192999.1 CDS Fjoh_0645 NC_009441.1 706233 706721 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(706233..706721) Flavobacterium johnsoniae UW101 5091390 YP_001193000.1 CDS Fjoh_0646 NC_009441.1 706745 707743 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(706745..707743) Flavobacterium johnsoniae UW101 5091391 YP_001193001.1 CDS rpmF NC_009441.1 707916 708110 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(707916..708110) Flavobacterium johnsoniae UW101 5091392 YP_001193002.1 CDS Fjoh_0648 NC_009441.1 708120 708662 R PFAM: protein of unknown function DUF177; hypothetical protein complement(708120..708662) Flavobacterium johnsoniae UW101 5091393 YP_001193003.1 CDS Fjoh_0649 NC_009441.1 708768 709817 R TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase complement(708768..709817) Flavobacterium johnsoniae UW101 5091394 YP_001193004.1 CDS Fjoh_0650 NC_009441.1 709875 710465 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 709875..710465 Flavobacterium johnsoniae UW101 5091395 YP_001193005.1 CDS Fjoh_0651 NC_009441.1 710501 710767 R hypothetical protein complement(710501..710767) Flavobacterium johnsoniae UW101 5091396 YP_001193006.1 CDS Fjoh_0652 NC_009441.1 711290 712279 D TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 711290..712279 Flavobacterium johnsoniae UW101 5091397 YP_001193007.1 CDS Fjoh_0653 NC_009441.1 712263 713486 R hypothetical protein complement(712263..713486) Flavobacterium johnsoniae UW101 5091398 YP_001193008.1 CDS Fjoh_0654 NC_009441.1 713490 713870 R PFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease vsr complement(713490..713870) Flavobacterium johnsoniae UW101 5091399 YP_001193009.1 CDS Fjoh_0655 NC_009441.1 713948 714679 R hypothetical protein complement(713948..714679) Flavobacterium johnsoniae UW101 5091400 YP_001193010.1 CDS Fjoh_0656 NC_009441.1 714817 715221 R hypothetical protein complement(714817..715221) Flavobacterium johnsoniae UW101 5091401 YP_001193011.1 CDS Fjoh_0657 NC_009441.1 715554 716504 D hypothetical protein 715554..716504 Flavobacterium johnsoniae UW101 5091402 YP_001193012.1 CDS Fjoh_0658 NC_009441.1 716509 717204 D hypothetical protein 716509..717204 Flavobacterium johnsoniae UW101 5091403 YP_001193013.1 CDS Fjoh_0659 NC_009441.1 717569 717973 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(717569..717973) Flavobacterium johnsoniae UW101 5094156 YP_001193014.1 CDS Fjoh_0660 NC_009441.1 717983 720343 R hypothetical protein complement(717983..720343) Flavobacterium johnsoniae UW101 5091405 YP_001193015.1 CDS Fjoh_0661 NC_009441.1 720303 721307 R hypothetical protein complement(720303..721307) Flavobacterium johnsoniae UW101 5091406 YP_001193016.1 CDS Fjoh_0662 NC_009441.1 721497 722393 R hypothetical protein complement(721497..722393) Flavobacterium johnsoniae UW101 5091407 YP_001193017.1 CDS Fjoh_0663 NC_009441.1 722658 724346 D hypothetical protein 722658..724346 Flavobacterium johnsoniae UW101 5091408 YP_001193018.1 CDS Fjoh_0664 NC_009441.1 724343 725110 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(724343..725110) Flavobacterium johnsoniae UW101 5091409 YP_001193019.1 CDS Fjoh_0665 NC_009441.1 725346 728501 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 725346..728501 Flavobacterium johnsoniae UW101 5091410 YP_001193020.2 CDS Fjoh_0666 NC_009441.1 728536 730065 D RagB/SusD domain-containing protein 728536..730065 Flavobacterium johnsoniae UW101 5091411 YP_001193021.1 CDS Fjoh_0667 NC_009441.1 730272 731591 D TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; gluconate transporter 730272..731591 Flavobacterium johnsoniae UW101 5091412 YP_001193022.1 CDS Fjoh_0668 NC_009441.1 731596 732063 D PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 731596..732063 Flavobacterium johnsoniae UW101 5091413 YP_001193023.1 CDS Fjoh_0669 NC_009441.1 732535 733566 D PFAM: PfkB domain protein; ribokinase-like domain-containing protein 732535..733566 Flavobacterium johnsoniae UW101 5091414 YP_001193024.1 CDS Fjoh_0670 NC_009441.1 733576 734223 D PFAM: KDPG and KHG aldolase; KDPG and KHG aldolase 733576..734223 Flavobacterium johnsoniae UW101 5091415 YP_001193025.1 CDS Fjoh_0671 NC_009441.1 734227 735342 D PFAM: alanine racemase domain protein; alanine racemase 734227..735342 Flavobacterium johnsoniae UW101 5091416 YP_001193026.1 CDS Fjoh_0672 NC_009441.1 735361 736431 D PFAM: peptidase M19, renal dipeptidase; peptidase M19, renal dipeptidase 735361..736431 Flavobacterium johnsoniae UW101 5091417 YP_001193027.1 CDS Fjoh_0673 NC_009441.1 736428 737204 R PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; DeoR family transcriptional regulator complement(736428..737204) Flavobacterium johnsoniae UW101 5091418 YP_001193028.1 CDS Fjoh_0674 NC_009441.1 737391 739691 D PFAM: glycoside hydrolase, family 20; PA14 domain protein; SMART: PA14-related domain protein; beta-N-acetylhexosaminidase 737391..739691 Flavobacterium johnsoniae UW101 5091419 YP_001193029.1 CDS Fjoh_0675 NC_009441.1 740022 740768 R PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; succinate dehydrogenase/fumarate reductase iron-sulfur subunit complement(740022..740768) Flavobacterium johnsoniae UW101 5091420 YP_001193030.1 CDS sdhA NC_009441.1 740864 742864 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(740864..742864) Flavobacterium johnsoniae UW101 5091421 YP_001193031.1 CDS Fjoh_0677 NC_009441.1 742880 743545 R TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase/fumarate reductase cytochrome b subunit complement(742880..743545) Flavobacterium johnsoniae UW101 5091422 YP_001193032.1 CDS Fjoh_0678 NC_009441.1 743902 745263 D PFAM: Hydroxymethylglutaryl-coenzyme A synthase, N-terminal domain; Hydroxymethylglutaryl-coenzyme A synthase C terminal domain protein; hydroxymethylglutaryl-CoA synthase 743902..745263 Flavobacterium johnsoniae UW101 5091423 YP_001193033.1 CDS Fjoh_0679 NC_009441.1 745587 746747 R hypothetical protein complement(745587..746747) Flavobacterium johnsoniae UW101 5091424 YP_001193034.1 CDS Fjoh_0680 NC_009441.1 747102 747473 D hypothetical protein 747102..747473 Flavobacterium johnsoniae UW101 5091425 YP_001193035.1 CDS Fjoh_0681 NC_009441.1 747644 748201 R hypothetical protein complement(747644..748201) Flavobacterium johnsoniae UW101 5091426 YP_001193036.1 CDS Fjoh_0682 NC_009441.1 748303 749043 R response regulator receiver protein complement(748303..749043) Flavobacterium johnsoniae UW101 5091427 YP_001193037.1 CDS Fjoh_0683 NC_009441.1 749184 749624 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(749184..749624) Flavobacterium johnsoniae UW101 5091428 YP_001193038.1 CDS Fjoh_0684 NC_009441.1 749679 750278 R hypothetical protein complement(749679..750278) Flavobacterium johnsoniae UW101 5091429 YP_001193039.1 CDS Fjoh_0685 NC_009441.1 750275 751606 R hypothetical protein complement(750275..751606) Flavobacterium johnsoniae UW101 5091430 YP_001193040.1 CDS Fjoh_0686 NC_009441.1 751793 752206 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 751793..752206 Flavobacterium johnsoniae UW101 5091431 YP_001193041.1 CDS Fjoh_0687 NC_009441.1 752339 753259 R hypothetical protein complement(752339..753259) Flavobacterium johnsoniae UW101 5091432 YP_001193042.1 CDS Fjoh_0688 NC_009441.1 753996 755288 D PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; peptidase M24 753996..755288 Flavobacterium johnsoniae UW101 5091433 YP_001193043.1 CDS Fjoh_0689 NC_009441.1 755281 756192 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 755281..756192 Flavobacterium johnsoniae UW101 5090723 YP_001193044.1 CDS Fjoh_0690 NC_009441.1 756605 757123 R PFAM: Ferritin, Dps family protein; Dps family ferritin complement(756605..757123) Flavobacterium johnsoniae UW101 5090724 YP_001193045.1 CDS Fjoh_0691 NC_009441.1 757213 757569 R hypothetical protein complement(757213..757569) Flavobacterium johnsoniae UW101 5090725 YP_001193046.1 CDS Fjoh_0692 NC_009441.1 757749 758552 D PFAM: protein of unknown function DUF124; hypothetical protein 757749..758552 Flavobacterium johnsoniae UW101 5090726 YP_001193047.1 CDS Fjoh_0693 NC_009441.1 758719 759495 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 758719..759495 Flavobacterium johnsoniae UW101 5090727 YP_001193048.1 CDS Fjoh_0694 NC_009441.1 759578 759952 R hypothetical protein complement(759578..759952) Flavobacterium johnsoniae UW101 5090728 YP_001193049.1 CDS Fjoh_0695 NC_009441.1 759979 760299 R hypothetical protein complement(759979..760299) Flavobacterium johnsoniae UW101 5090729 YP_001193050.1 CDS Fjoh_0696 NC_009441.1 761156 763915 R hypothetical protein complement(761156..763915) Flavobacterium johnsoniae UW101 5090730 YP_001193051.1 CDS Fjoh_0697 NC_009441.1 763979 765442 R PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(763979..765442) Flavobacterium johnsoniae UW101 5090731 YP_001193052.1 CDS Fjoh_0698 NC_009441.1 765556 766749 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase complement(765556..766749) Flavobacterium johnsoniae UW101 5090732 YP_001193053.1 CDS Fjoh_0699 NC_009441.1 766834 769992 R PFAM: UvrD/REP helicase; UvrD/REP helicase complement(766834..769992) Flavobacterium johnsoniae UW101 5090733 YP_001193054.1 CDS Fjoh_0700 NC_009441.1 770135 770734 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(770135..770734) Flavobacterium johnsoniae UW101 5090734 YP_001193055.1 CDS Fjoh_0701 NC_009441.1 771243 771599 D PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 771243..771599 Flavobacterium johnsoniae UW101 5090735 YP_001193056.1 CDS Fjoh_0702 NC_009441.1 771635 772015 D hypothetical protein 771635..772015 Flavobacterium johnsoniae UW101 5090736 YP_001193057.1 CDS Fjoh_0703 NC_009441.1 772258 772638 R TraR/DksA family transcriptional regulator complement(772258..772638) Flavobacterium johnsoniae UW101 5090737 YP_001193058.1 CDS ileS NC_009441.1 772646 776047 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase complement(772646..776047) Flavobacterium johnsoniae UW101 5090738 YP_001193059.1 CDS Fjoh_0705 NC_009441.1 776274 777866 R hypothetical protein complement(776274..777866) Flavobacterium johnsoniae UW101 5090739 YP_001193060.1 CDS Fjoh_0706 NC_009441.1 777914 778627 R TIGRFAM: DNA repair protein RecO; DNA repair protein RecO complement(777914..778627) Flavobacterium johnsoniae UW101 5090740 YP_001193061.1 CDS Fjoh_0707 NC_009441.1 778668 780950 R periplasmic ligand-binding sensor protein complement(778668..780950) Flavobacterium johnsoniae UW101 5090741 YP_001193062.1 CDS Fjoh_0708 NC_009441.1 781080 782423 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(781080..782423) Flavobacterium johnsoniae UW101 5090742 YP_001193063.1 CDS Fjoh_0709 NC_009441.1 782748 783542 D hypothetical protein 782748..783542 Flavobacterium johnsoniae UW101 5090743 YP_001193064.1 CDS Fjoh_0710 NC_009441.1 783623 784765 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; cystathionine gamma-lyase complement(783623..784765) Flavobacterium johnsoniae UW101 5090744 YP_001193065.1 CDS Fjoh_0711 NC_009441.1 784870 785613 D hypothetical protein 784870..785613 Flavobacterium johnsoniae UW101 5090745 YP_001193066.1 CDS Fjoh_0712 NC_009441.1 785666 786811 R PFAM: AAA-4 family protein; transcriptional regulator complement(785666..786811) Flavobacterium johnsoniae UW101 5090746 YP_001193067.1 CDS Fjoh_0713 NC_009441.1 786903 787658 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KR; short-chain dehydrogenase/reductase SDR complement(786903..787658) Flavobacterium johnsoniae UW101 5090747 YP_001193068.1 CDS Fjoh_0714 NC_009441.1 787754 788626 R PFAM: aldo/keto reductase; aldo/keto reductase complement(787754..788626) Flavobacterium johnsoniae UW101 5090748 YP_001193069.1 CDS Fjoh_0715 NC_009441.1 788840 789844 D PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase 788840..789844 Flavobacterium johnsoniae UW101 5090749 YP_001193070.1 CDS Fjoh_0716 NC_009441.1 789924 790787 D hypothetical protein 789924..790787 Flavobacterium johnsoniae UW101 5090750 YP_001193071.1 CDS Fjoh_0717 NC_009441.1 790861 791217 D hypothetical protein 790861..791217 Flavobacterium johnsoniae UW101 5090751 YP_001193072.1 CDS Fjoh_0718 NC_009441.1 791292 792923 D hypothetical protein 791292..792923 Flavobacterium johnsoniae UW101 5090752 YP_001193073.1 CDS Fjoh_0719 NC_009441.1 792923 793927 D PFAM: von Willebrand factor, type A; von Willebrand factor A 792923..793927 Flavobacterium johnsoniae UW101 5090753 YP_001193074.1 CDS Fjoh_0720 NC_009441.1 794008 795042 D PFAM: von Willebrand factor, type A; von Willebrand factor A 794008..795042 Flavobacterium johnsoniae UW101 5090754 YP_001193075.1 CDS Fjoh_0721 NC_009441.1 795085 795861 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 795085..795861 Flavobacterium johnsoniae UW101 5090755 YP_001193076.1 CDS Fjoh_0722 NC_009441.1 795960 797714 D hypothetical protein 795960..797714 Flavobacterium johnsoniae UW101 5090756 YP_001193077.1 CDS Fjoh_0723 NC_009441.1 797772 798518 D PFAM: TPR repeat-containing protein; protein of unknown function DUF1058; Tetratricopeptide TPR_2 repeat protein; SH3, type 3 domain protein; SMART: Tetratricopeptide domain protein; hypothetical protein 797772..798518 Flavobacterium johnsoniae UW101 5090757 YP_001193078.1 CDS Fjoh_0724 NC_009441.1 798609 799178 R PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(798609..799178) Flavobacterium johnsoniae UW101 5090758 YP_001193079.1 CDS Fjoh_0725 NC_009441.1 799165 800145 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase complement(799165..800145) Flavobacterium johnsoniae UW101 5090759 YP_001193080.1 CDS uvrC NC_009441.1 800284 802077 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 800284..802077 Flavobacterium johnsoniae UW101 5090760 YP_001193081.1 CDS Fjoh_0727 NC_009441.1 802087 804369 D PFAM: Patatin; patatin 802087..804369 Flavobacterium johnsoniae UW101 5090761 YP_001193082.1 CDS Fjoh_0728 NC_009441.1 804687 805844 D PFAM: homogentisate 1,2-dioxygenase; homogentisate 1,2-dioxygenase 804687..805844 Flavobacterium johnsoniae UW101 5090762 YP_001193083.1 CDS Fjoh_0729 NC_009441.1 806034 807194 D TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 806034..807194 Flavobacterium johnsoniae UW101 5090763 YP_001193084.1 CDS Fjoh_0730 NC_009441.1 807492 808265 D hypothetical protein 807492..808265 Flavobacterium johnsoniae UW101 5090764 YP_001193085.1 CDS Fjoh_0731 NC_009441.1 808262 809203 D tryptophan 2 3-dioxygenase (vermilion)-like protein 808262..809203 Flavobacterium johnsoniae UW101 5090765 YP_001193086.1 CDS Fjoh_0732 NC_009441.1 809227 810447 D PFAM: peptidase M23B; peptidase M23B 809227..810447 Flavobacterium johnsoniae UW101 5090766 YP_001193087.1 CDS Fjoh_0733 NC_009441.1 810480 811100 D hypothetical protein 810480..811100 Flavobacterium johnsoniae UW101 5090767 YP_001193088.1 CDS Fjoh_0734 NC_009441.1 811141 811470 D hypothetical protein 811141..811470 Flavobacterium johnsoniae UW101 5090768 YP_001193089.1 CDS pgi NC_009441.1 811591 813234 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 811591..813234 Flavobacterium johnsoniae UW101 5090769 YP_001193090.1 CDS Fjoh_0736 NC_009441.1 813560 816388 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 813560..816388 Flavobacterium johnsoniae UW101 5090770 YP_001193091.1 CDS Fjoh_0737 NC_009441.1 816496 816918 D hypothetical protein 816496..816918 Flavobacterium johnsoniae UW101 5090771 YP_001193092.1 CDS Fjoh_0738 NC_009441.1 817012 817503 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; rare lipoprotein A 817012..817503 Flavobacterium johnsoniae UW101 5090772 YP_001193093.1 CDS Fjoh_0739 NC_009441.1 817534 817989 R hypothetical protein complement(817534..817989) Flavobacterium johnsoniae UW101 5090773 YP_001193094.1 CDS Fjoh_0740 NC_009441.1 818069 818416 D PFAM: arsenate reductase and related; arsenate reductase 818069..818416 Flavobacterium johnsoniae UW101 5090774 YP_001193095.1 CDS Fjoh_0741 NC_009441.1 818521 819381 D PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; hypothetical protein 818521..819381 Flavobacterium johnsoniae UW101 5090775 YP_001193096.1 CDS gmk NC_009441.1 819451 820023 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 819451..820023 Flavobacterium johnsoniae UW101 5090776 YP_001193097.1 CDS Fjoh_0743 NC_009441.1 820082 820447 D PFAM: S23 ribosomal protein; S23 ribosomal protein 820082..820447 Flavobacterium johnsoniae UW101 5090777 YP_001193098.1 CDS nadD NC_009441.1 820474 821055 D transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 820474..821055 Flavobacterium johnsoniae UW101 5093683 YP_001193099.1 CDS Fjoh_0745 NC_009441.1 821339 822808 R PFAM: Nicotinate phosphoribosyltransferase and related; nicotinate phosphoribosyltransferase complement(821339..822808) Flavobacterium johnsoniae UW101 5093684 YP_001193100.1 CDS Fjoh_0746 NC_009441.1 822817 823755 R PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosylation/crystallin J1 complement(822817..823755) Flavobacterium johnsoniae UW101 5093685 YP_001193101.1 CDS Fjoh_0747 NC_009441.1 823757 824488 R PFAM: metallophosphoesterase; metallophosphoesterase complement(823757..824488) Flavobacterium johnsoniae UW101 5093686 YP_001193102.1 CDS Fjoh_0748 NC_009441.1 824485 825033 R PFAM: phosphotransferase KptA/Tpt1; phosphate acetyltransferase complement(824485..825033) Flavobacterium johnsoniae UW101 5093687 YP_001193103.1 CDS Fjoh_0749 NC_009441.1 825046 825516 R SMART: Appr-1-p processing domain protein; appr-1-p processing domain-containing protein complement(825046..825516) Flavobacterium johnsoniae UW101 5093688 YP_001193104.1 CDS Fjoh_0750 NC_009441.1 825654 826181 R PFAM: conserved hypothetical protein CHP02464; hypothetical protein complement(825654..826181) Flavobacterium johnsoniae UW101 5093689 YP_001193105.1 CDS Fjoh_0751 NC_009441.1 826190 827272 R PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase complement(826190..827272) Flavobacterium johnsoniae UW101 5093690 YP_001193106.1 CDS Fjoh_0752 NC_009441.1 827434 828309 R hypothetical protein complement(827434..828309) Flavobacterium johnsoniae UW101 5093691 YP_001193107.1 CDS Fjoh_0753 NC_009441.1 828312 828647 R hypothetical protein complement(828312..828647) Flavobacterium johnsoniae UW101 5093692 YP_001193108.1 CDS Fjoh_0754 NC_009441.1 828790 829608 R hypothetical protein complement(828790..829608) Flavobacterium johnsoniae UW101 5093693 YP_001193109.1 CDS Fjoh_0755 NC_009441.1 829605 830432 R TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(829605..830432) Flavobacterium johnsoniae UW101 5093694 YP_001193110.1 CDS Fjoh_0756 NC_009441.1 830507 831199 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(830507..831199) Flavobacterium johnsoniae UW101 5093695 YP_001193111.1 CDS Fjoh_0757 NC_009441.1 831309 831665 R PFAM: PKD domain containing protein; PKD domain-containing protein complement(831309..831665) Flavobacterium johnsoniae UW101 5093696 YP_001193112.1 CDS Fjoh_0758 NC_009441.1 831763 832668 R PFAM: regulatory protein, LysR; LysR family transcriptional regulator complement(831763..832668) Flavobacterium johnsoniae UW101 5093697 YP_001193113.1 CDS Fjoh_0760 NC_009441.1 833671 834828 D PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 833671..834828 Flavobacterium johnsoniae UW101 5094157 YP_001193114.1 CDS Fjoh_0761 NC_009441.1 835050 837521 R hypothetical protein complement(835050..837521) Flavobacterium johnsoniae UW101 5093699 YP_001193115.1 CDS Fjoh_0762 NC_009441.1 837711 838706 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 837711..838706 Flavobacterium johnsoniae UW101 5093700 YP_001193116.1 CDS Fjoh_0763 NC_009441.1 839086 841761 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 839086..841761 Flavobacterium johnsoniae UW101 5093701 YP_001193117.1 CDS Fjoh_0764 NC_009441.1 841773 843083 D hypothetical protein 841773..843083 Flavobacterium johnsoniae UW101 5093702 YP_001193118.1 CDS Fjoh_0765 NC_009441.1 843096 844691 D hypothetical protein 843096..844691 Flavobacterium johnsoniae UW101 5093703 YP_001193119.1 CDS Fjoh_0766 NC_009441.1 844695 845834 D PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 844695..845834 Flavobacterium johnsoniae UW101 5093704 YP_001193120.1 CDS Fjoh_0767 NC_009441.1 845972 846379 R hypothetical protein complement(845972..846379) Flavobacterium johnsoniae UW101 5093705 YP_001193121.1 CDS pheS NC_009441.1 846463 847482 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(846463..847482) Flavobacterium johnsoniae UW101 5093706 YP_001193122.1 CDS Fjoh_0769 NC_009441.1 847567 848094 R hypothetical protein complement(847567..848094) Flavobacterium johnsoniae UW101 5093707 YP_001193123.1 CDS Fjoh_0770 NC_009441.1 848181 848537 R hypothetical protein complement(848181..848537) Flavobacterium johnsoniae UW101 5093708 YP_001193124.1 CDS Fjoh_0771 NC_009441.1 848781 849329 D PFAM: Colicin V production protein; colicin V production protein 848781..849329 Flavobacterium johnsoniae UW101 5093709 YP_001193125.1 CDS Fjoh_0772 NC_009441.1 850019 852427 R hypothetical protein complement(850019..852427) Flavobacterium johnsoniae UW101 5093710 YP_001193126.1 CDS Fjoh_0773 NC_009441.1 852624 854570 R PFAM: protein of unknown function DUF303, acetylesterase ; glycoside hydrolase family 2, sugar binding; hypothetical protein complement(852624..854570) Flavobacterium johnsoniae UW101 5093711 YP_001193127.1 CDS Fjoh_0774 NC_009441.1 854683 856191 R PFAM: glycoside hydrolase, family 5; glycoside hydrolase complement(854683..856191) Flavobacterium johnsoniae UW101 5093712 YP_001193128.1 CDS Fjoh_0775 NC_009441.1 856193 858430 R PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 protein complement(856193..858430) Flavobacterium johnsoniae UW101 5093713 YP_001193129.1 CDS Fjoh_0776 NC_009441.1 858521 860092 R PFAM: glycoside hydrolase, family 39; glycoside hydrolase complement(858521..860092) Flavobacterium johnsoniae UW101 5093714 YP_001193130.1 CDS Fjoh_0777 NC_009441.1 860160 861980 R hypothetical protein complement(860160..861980) Flavobacterium johnsoniae UW101 5093715 YP_001193131.1 CDS Fjoh_0778 NC_009441.1 862418 864817 R PFAM: glycoside hydrolase, family 31; glycoside hydrolase complement(862418..864817) Flavobacterium johnsoniae UW101 5093716 YP_001193132.1 CDS Fjoh_0779 NC_009441.1 865012 867495 R PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase complement(865012..867495) Flavobacterium johnsoniae UW101 5093717 YP_001193133.1 CDS Fjoh_0780 NC_009441.1 867579 868913 R hypothetical protein complement(867579..868913) Flavobacterium johnsoniae UW101 5093718 YP_001193134.1 CDS Fjoh_0781 NC_009441.1 868972 870567 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(868972..870567) Flavobacterium johnsoniae UW101 5093719 YP_001193135.1 CDS Fjoh_0782 NC_009441.1 870554 873685 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(870554..873685) Flavobacterium johnsoniae UW101 5093720 YP_001193136.1 CDS Fjoh_0783 NC_009441.1 874186 874902 D PFAM: NUDIX hydrolase; NUDIX hydrolase 874186..874902 Flavobacterium johnsoniae UW101 5093721 YP_001193137.1 CDS Fjoh_0784 NC_009441.1 874925 875662 D PFAM: NUDIX hydrolase; NUDIX hydrolase 874925..875662 Flavobacterium johnsoniae UW101 5093722 YP_001193138.1 CDS Fjoh_0785 NC_009441.1 875717 875926 R hypothetical protein complement(875717..875926) Flavobacterium johnsoniae UW101 5093723 YP_001193139.1 CDS Fjoh_0786 NC_009441.1 876411 878207 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 876411..878207 Flavobacterium johnsoniae UW101 5093724 YP_001193140.1 CDS Fjoh_0787 NC_009441.1 878477 879094 D hypothetical protein 878477..879094 Flavobacterium johnsoniae UW101 5093725 YP_001193141.1 CDS Fjoh_0788 NC_009441.1 879237 880196 D PFAM: Helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein 879237..880196 Flavobacterium johnsoniae UW101 5093726 YP_001193142.1 CDS Fjoh_0789 NC_009441.1 880239 880736 R PFAM: DinB family protein; DinB family protein complement(880239..880736) Flavobacterium johnsoniae UW101 5093727 YP_001193143.1 CDS Fjoh_0790 NC_009441.1 880783 881262 R PFAM: DinB family protein; DinB family protein complement(880783..881262) Flavobacterium johnsoniae UW101 5093728 YP_001193144.1 CDS Fjoh_0791 NC_009441.1 881497 882543 D TIGRFAM: thiamine-monophosphate kinase; thiamine-monophosphate kinase 881497..882543 Flavobacterium johnsoniae UW101 5093729 YP_001193145.1 CDS Fjoh_0792 NC_009441.1 882654 883352 R PFAM: response regulator receiver; response regulator receiver protein complement(882654..883352) Flavobacterium johnsoniae UW101 5093730 YP_001193146.1 CDS Fjoh_0793 NC_009441.1 883342 885363 R PFAM: TPR repeat-containing protein; ATP-binding region, ATPase domain protein domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; histidine kinase complement(883342..885363) Flavobacterium johnsoniae UW101 5093731 YP_001193147.1 CDS Fjoh_0794 NC_009441.1 885503 885748 R hypothetical protein complement(885503..885748) Flavobacterium johnsoniae UW101 5093732 YP_001193148.1 CDS Fjoh_0795 NC_009441.1 885925 886734 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(885925..886734) Flavobacterium johnsoniae UW101 5093733 YP_001193149.1 CDS Fjoh_0796 NC_009441.1 887013 888554 R Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase complement(887013..888554) Flavobacterium johnsoniae UW101 5093734 YP_001193150.1 CDS Fjoh_0797 NC_009441.1 888716 889336 D amidophosphoribosyltransferase 888716..889336 Flavobacterium johnsoniae UW101 5093735 YP_001193151.1 CDS Fjoh_0798 NC_009441.1 889412 892072 R PFAM: Proprotein convertase, P; proprotein convertase, P complement(889412..892072) Flavobacterium johnsoniae UW101 5093736 YP_001193152.1 CDS Fjoh_0799 NC_009441.1 892273 893205 D TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; riboflavin biosynthesis protein RibF 892273..893205 Flavobacterium johnsoniae UW101 5093737 YP_001193153.1 CDS Fjoh_0800 NC_009441.1 893320 893757 D hypothetical protein 893320..893757 Flavobacterium johnsoniae UW101 5091989 YP_001193154.1 CDS Fjoh_0801 NC_009441.1 893929 895020 D TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 893929..895020 Flavobacterium johnsoniae UW101 5091990 YP_001193155.1 CDS Fjoh_0802 NC_009441.1 895101 895967 D SMART: transcription factor jumonji, jmjC domain protein; transcription factor jumonji domain-containing protein 895101..895967 Flavobacterium johnsoniae UW101 5091991 YP_001193156.1 CDS Fjoh_0803 NC_009441.1 896039 899383 R hypothetical protein complement(896039..899383) Flavobacterium johnsoniae UW101 5091992 YP_001193157.1 CDS Fjoh_0804 NC_009441.1 900078 903920 R hypothetical protein complement(900078..903920) Flavobacterium johnsoniae UW101 5091993 YP_001193158.1 CDS Fjoh_0805 NC_009441.1 904059 907124 R TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; hypothetical protein complement(904059..907124) Flavobacterium johnsoniae UW101 5091994 YP_001193159.1 CDS Fjoh_0806 NC_009441.1 907269 911324 R hypothetical protein complement(907269..911324) Flavobacterium johnsoniae UW101 5091995 YP_001193160.1 CDS Fjoh_0807 NC_009441.1 911732 912202 R PFAM: regulatory protein RecX; regulatory protein RecX complement(911732..912202) Flavobacterium johnsoniae UW101 5091996 YP_001193161.1 CDS Fjoh_0808 NC_009441.1 912495 916805 D PFAM: D-galactoside/L-rhamnose binding SUEL lectin; D-galactoside/L-rhamnose binding SUEL lectin 912495..916805 Flavobacterium johnsoniae UW101 5091997 YP_001193162.1 CDS Fjoh_0809 NC_009441.1 916880 918049 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(916880..918049) Flavobacterium johnsoniae UW101 5091998 YP_001193163.1 CDS Fjoh_0810 NC_009441.1 918175 919446 R TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(918175..919446) Flavobacterium johnsoniae UW101 5091999 YP_001193164.1 CDS Fjoh_0811 NC_009441.1 919473 920105 R TIGRFAM: dethiobiotin synthase; dethiobiotin synthase complement(919473..920105) Flavobacterium johnsoniae UW101 5092000 YP_001193165.1 CDS Fjoh_0812 NC_009441.1 920297 921157 R PFAM: GumN family protein; GumN family protein complement(920297..921157) Flavobacterium johnsoniae UW101 5092001 YP_001193166.1 CDS Fjoh_0813 NC_009441.1 921287 921694 R hypothetical protein complement(921287..921694) Flavobacterium johnsoniae UW101 5092002 YP_001193167.1 CDS Fjoh_0814 NC_009441.1 921705 922841 R PFAM: aminotransferase, class I and II; aminotransferase class-III; 8-amino-7-oxononanoate synthase complement(921705..922841) Flavobacterium johnsoniae UW101 5092003 YP_001193168.1 CDS Fjoh_0815 NC_009441.1 922918 923556 R NADH-flavin reductase-like protein complement(922918..923556) Flavobacterium johnsoniae UW101 5092004 YP_001193169.1 CDS Fjoh_0816 NC_009441.1 923743 924252 R hypothetical protein complement(923743..924252) Flavobacterium johnsoniae UW101 5092005 YP_001193170.1 CDS Fjoh_0817 NC_009441.1 924386 924670 R hypothetical protein complement(924386..924670) Flavobacterium johnsoniae UW101 5092006 YP_001193171.1 CDS Fjoh_0818 NC_009441.1 924922 925203 R PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; H+-transporting two-sector ATPase subunit delta/epsilon complement(924922..925203) Flavobacterium johnsoniae UW101 5092007 YP_001193172.1 CDS Fjoh_0819 NC_009441.1 925286 926797 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(925286..926797) Flavobacterium johnsoniae UW101 5092008 YP_001193173.1 CDS Fjoh_0820 NC_009441.1 927033 928607 R hypothetical protein complement(927033..928607) Flavobacterium johnsoniae UW101 5092009 YP_001193174.1 CDS Fjoh_0821 NC_009441.1 928694 931483 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(928694..931483) Flavobacterium johnsoniae UW101 5092010 YP_001193175.1 CDS Fjoh_0822 NC_009441.1 931800 933650 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(931800..933650) Flavobacterium johnsoniae UW101 5092011 YP_001193176.1 CDS Fjoh_0823 NC_009441.1 933660 935276 R hypothetical protein complement(933660..935276) Flavobacterium johnsoniae UW101 5092012 YP_001193177.1 CDS Fjoh_0824 NC_009441.1 935299 936105 R PFAM: Starch synthase catalytic domain protein; starch synthase complement(935299..936105) Flavobacterium johnsoniae UW101 5092013 YP_001193178.1 CDS Fjoh_0825 NC_009441.1 936184 937062 D TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; PFAM: Pantoate-beta-alanine ligase; pantoate--beta-alanine ligase 936184..937062 Flavobacterium johnsoniae UW101 5092014 YP_001193179.1 CDS Fjoh_0826 NC_009441.1 937077 937427 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 937077..937427 Flavobacterium johnsoniae UW101 5092015 YP_001193180.1 CDS Fjoh_0827 NC_009441.1 937613 938779 D PFAM: esterase; esterase 937613..938779 Flavobacterium johnsoniae UW101 5092016 YP_001193181.1 CDS Fjoh_0828 NC_009441.1 938779 940140 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 938779..940140 Flavobacterium johnsoniae UW101 5092017 YP_001193182.1 CDS Fjoh_0829 NC_009441.1 940161 942128 D PFAM: glycosyl transferase, family 51; glycosyl transferase 940161..942128 Flavobacterium johnsoniae UW101 5092018 YP_001193183.1 CDS Fjoh_0830 NC_009441.1 942302 943339 R PFAM: aldo/keto reductase; aldo/keto reductase complement(942302..943339) Flavobacterium johnsoniae UW101 5092019 YP_001193184.1 CDS Fjoh_0831 NC_009441.1 943530 944474 R PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(943530..944474) Flavobacterium johnsoniae UW101 5092020 YP_001193185.1 CDS Fjoh_0832 NC_009441.1 944550 945311 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth complement(944550..945311) Flavobacterium johnsoniae UW101 5092021 YP_001193186.1 CDS Fjoh_0833 NC_009441.1 945432 947234 D PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 945432..947234 Flavobacterium johnsoniae UW101 5092022 YP_001193187.1 CDS Fjoh_0834 NC_009441.1 947287 947673 R hypothetical protein complement(947287..947673) Flavobacterium johnsoniae UW101 5092023 YP_001193188.1 CDS Fjoh_0835 NC_009441.1 947970 948335 R PFAM: protein of unknown function DUF805; hypothetical protein complement(947970..948335) Flavobacterium johnsoniae UW101 5092024 YP_001193189.1 CDS Fjoh_0836 NC_009441.1 948534 948773 R PFAM: TM2 domain containing protein+B7201; TM2 domain-containing protein complement(948534..948773) Flavobacterium johnsoniae UW101 5092025 YP_001193190.1 CDS Fjoh_0837 NC_009441.1 948858 949136 R PFAM: TM2 domain containing protein+B7201; TM2 domain-containing protein complement(948858..949136) Flavobacterium johnsoniae UW101 5092026 YP_001193191.1 CDS Fjoh_0838 NC_009441.1 949161 949532 R PFAM: protein of unknown function DUF805; hypothetical protein complement(949161..949532) Flavobacterium johnsoniae UW101 5092027 YP_001193192.1 CDS Fjoh_0839 NC_009441.1 949735 950679 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase complement(949735..950679) Flavobacterium johnsoniae UW101 5092028 YP_001193193.1 CDS Fjoh_0840 NC_009441.1 951149 952294 D PFAM: Na+/H+ antiporter NhaA; sodium/hydrogen exchanger; Na+/H+ antiporter NhaA 951149..952294 Flavobacterium johnsoniae UW101 5092029 YP_001193194.1 CDS Fjoh_0841 NC_009441.1 952296 952826 D hypothetical protein 952296..952826 Flavobacterium johnsoniae UW101 5092030 YP_001193195.1 CDS Fjoh_0842 NC_009441.1 952954 953730 R TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; pyrroline-5-carboxylate reductase complement(952954..953730) Flavobacterium johnsoniae UW101 5092031 YP_001193196.1 CDS Fjoh_0843 NC_009441.1 953844 955193 R TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; magnesium transporter complement(953844..955193) Flavobacterium johnsoniae UW101 5092032 YP_001193197.1 CDS ksgA NC_009441.1 955177 955962 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(955177..955962) Flavobacterium johnsoniae UW101 5092033 YP_001193198.1 CDS Fjoh_0845 NC_009441.1 956172 956483 R hypothetical protein complement(956172..956483) Flavobacterium johnsoniae UW101 5092034 YP_001193199.1 CDS Fjoh_0846 NC_009441.1 956624 958405 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(956624..958405) Flavobacterium johnsoniae UW101 5092035 YP_001193200.1 CDS Fjoh_0847 NC_009441.1 958542 959813 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(958542..959813) Flavobacterium johnsoniae UW101 5092036 YP_001193201.1 CDS Fjoh_0848 NC_009441.1 960261 961670 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(960261..961670) Flavobacterium johnsoniae UW101 5092037 YP_001193202.1 CDS Fjoh_0849 NC_009441.1 961696 962592 R hypothetical protein complement(961696..962592) Flavobacterium johnsoniae UW101 5092038 YP_001193203.1 CDS Fjoh_0850 NC_009441.1 962754 963293 R hypothetical protein complement(962754..963293) Flavobacterium johnsoniae UW101 5092039 YP_001193204.1 CDS Fjoh_0851 NC_009441.1 963498 964241 D hypothetical protein 963498..964241 Flavobacterium johnsoniae UW101 5092040 YP_001193205.1 CDS Fjoh_0852 NC_009441.1 964374 964820 D hypothetical protein 964374..964820 Flavobacterium johnsoniae UW101 5092041 YP_001193206.1 CDS Fjoh_0853 NC_009441.1 965003 965494 D hypothetical protein 965003..965494 Flavobacterium johnsoniae UW101 5092042 YP_001193207.1 CDS Fjoh_0854 NC_009441.1 965508 966065 D hypothetical protein 965508..966065 Flavobacterium johnsoniae UW101 5092043 YP_001193208.1 CDS Fjoh_0855 NC_009441.1 966140 967042 D TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; PhzF family phenazine biosynthesis protein 966140..967042 Flavobacterium johnsoniae UW101 5091711 YP_001193209.1 CDS Fjoh_0856 NC_009441.1 967105 967332 R SMART: zinc finger, CDGSH-type domain protein; zinc finger CDGSH-type domain-containing protein complement(967105..967332) Flavobacterium johnsoniae UW101 5091712 YP_001193210.1 CDS metG NC_009441.1 967792 969927 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 967792..969927 Flavobacterium johnsoniae UW101 5091713 YP_001193211.1 CDS Fjoh_0858 NC_009441.1 970173 970448 D hypothetical protein 970173..970448 Flavobacterium johnsoniae UW101 5091714 YP_001193212.1 CDS Fjoh_0859 NC_009441.1 971703 972263 D hypothetical protein 971703..972263 Flavobacterium johnsoniae UW101 5091715 YP_001193213.1 CDS Fjoh_0860 NC_009441.1 972275 973789 D PFAM: band 7 protein; hypothetical protein 972275..973789 Flavobacterium johnsoniae UW101 5091716 YP_001193214.1 CDS Fjoh_0861 NC_009441.1 973910 974794 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 973910..974794 Flavobacterium johnsoniae UW101 5091717 YP_001193215.1 CDS Fjoh_0862 NC_009441.1 975014 975721 D PFAM: Haloacid dehalogenase domain protein hydrolase; hydrolase 975014..975721 Flavobacterium johnsoniae UW101 5091718 YP_001193216.1 CDS Fjoh_0863 NC_009441.1 975721 976353 D PFAM: chloramphenicol acetyltransferase; chloramphenicol acetyltransferase 975721..976353 Flavobacterium johnsoniae UW101 5091719 YP_001193217.1 CDS Fjoh_0864 NC_009441.1 976463 977593 D PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 976463..977593 Flavobacterium johnsoniae UW101 5091720 YP_001193218.1 CDS Fjoh_0865 NC_009441.1 977756 979210 D hypothetical protein 977756..979210 Flavobacterium johnsoniae UW101 5091721 YP_001193219.1 CDS Fjoh_0866 NC_009441.1 979276 979794 D PFAM: Ferritin, Dps family protein; ferroxidase 979276..979794 Flavobacterium johnsoniae UW101 5091722 YP_001193220.1 CDS Fjoh_0867 NC_009441.1 980148 980840 D hypothetical protein 980148..980840 Flavobacterium johnsoniae UW101 5091723 YP_001193221.1 CDS Fjoh_0868 NC_009441.1 980926 981252 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(980926..981252) Flavobacterium johnsoniae UW101 5091724 YP_001193222.1 CDS Fjoh_0869 NC_009441.1 981386 982954 D PFAM: GCN5-related N-acetyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 981386..982954 Flavobacterium johnsoniae UW101 5091725 YP_001193223.1 CDS Fjoh_0870 NC_009441.1 982954 983301 D hypothetical protein 982954..983301 Flavobacterium johnsoniae UW101 5091726 YP_001193224.1 CDS Fjoh_0871 NC_009441.1 983313 985712 D PFAM: peptidase M20; peptidase M28; peptidase M28 983313..985712 Flavobacterium johnsoniae UW101 5091727 YP_001193225.1 CDS Fjoh_0872 NC_009441.1 985770 986165 R SMART: Rhodanese domain protein; rhodanese domain-containing protein complement(985770..986165) Flavobacterium johnsoniae UW101 5091728 YP_001193226.1 CDS Fjoh_0873 NC_009441.1 986313 987212 D PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 986313..987212 Flavobacterium johnsoniae UW101 5091729 YP_001193227.1 CDS Fjoh_0874 NC_009441.1 987200 987649 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 987200..987649 Flavobacterium johnsoniae UW101 5091730 YP_001193228.1 CDS Fjoh_0875 NC_009441.1 987771 988583 D PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 987771..988583 Flavobacterium johnsoniae UW101 5091731 YP_001193229.1 CDS Fjoh_0876 NC_009441.1 988732 989208 D TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 988732..989208 Flavobacterium johnsoniae UW101 5091732 YP_001193230.1 CDS Fjoh_0877 NC_009441.1 989400 990113 D hypothetical protein 989400..990113 Flavobacterium johnsoniae UW101 5091733 YP_001193231.1 CDS Fjoh_0878 NC_009441.1 990206 991279 D hypothetical protein 990206..991279 Flavobacterium johnsoniae UW101 5091734 YP_001193232.1 CDS Fjoh_0879 NC_009441.1 991565 993004 D PFAM: nucleoside recognition domain protein; nucleoside recognition domain-containing protein 991565..993004 Flavobacterium johnsoniae UW101 5091735 YP_001193233.1 CDS Fjoh_0880 NC_009441.1 993213 993956 D hypothetical protein 993213..993956 Flavobacterium johnsoniae UW101 5091736 YP_001193234.1 CDS Fjoh_0881 NC_009441.1 994028 995632 D TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta 994028..995632 Flavobacterium johnsoniae UW101 5091737 YP_001193235.1 CDS Fjoh_0882 NC_009441.1 995743 996243 R TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; PAS/PAC sensor protein complement(995743..996243) Flavobacterium johnsoniae UW101 5091738 YP_001193236.1 CDS Fjoh_0883 NC_009441.1 996328 997410 R PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(996328..997410) Flavobacterium johnsoniae UW101 5091739 YP_001193237.1 CDS Fjoh_0884 NC_009441.1 997551 998285 D PFAM: metallophosphoesterase; metallophosphoesterase 997551..998285 Flavobacterium johnsoniae UW101 5091740 YP_001193238.1 CDS Fjoh_0885 NC_009441.1 998335 998868 D hypothetical protein 998335..998868 Flavobacterium johnsoniae UW101 5091741 YP_001193239.1 CDS Fjoh_0886 NC_009441.1 999032 1001806 R PFAM: peptidase M4, thermolysin; Fibronectin, type III domain protein; Propeptide, peptidase M4 and M36; Peptidase M4, thermolysin; peptidase M4, thermolysin complement(999032..1001806) Flavobacterium johnsoniae UW101 5091742 YP_001193240.1 CDS Fjoh_0887 NC_009441.1 1002157 1002810 R TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(1002157..1002810) Flavobacterium johnsoniae UW101 5091743 YP_001193241.1 CDS Fjoh_0888 NC_009441.1 1002892 1003593 R TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(1002892..1003593) Flavobacterium johnsoniae UW101 5091744 YP_001193242.1 CDS Fjoh_0889 NC_009441.1 1003762 1006068 R PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; glycosyl transferase complement(1003762..1006068) Flavobacterium johnsoniae UW101 5091745 YP_001193243.1 CDS Fjoh_0890 NC_009441.1 1006079 1006558 R hypothetical protein complement(1006079..1006558) Flavobacterium johnsoniae UW101 5091746 YP_001193244.1 CDS Fjoh_0891 NC_009441.1 1006542 1007912 R PFAM: PSP1 domain protein; PSP1 domain-containing protein complement(1006542..1007912) Flavobacterium johnsoniae UW101 5091747 YP_001193245.1 CDS Fjoh_0892 NC_009441.1 1008230 1008700 D hypothetical protein 1008230..1008700 Flavobacterium johnsoniae UW101 5091748 YP_001193246.1 CDS Fjoh_0893 NC_009441.1 1008831 1009790 D hypothetical protein 1008831..1009790 Flavobacterium johnsoniae UW101 5091749 YP_001193247.1 CDS Fjoh_0894 NC_009441.1 1009935 1010348 D hypothetical protein 1009935..1010348 Flavobacterium johnsoniae UW101 5091750 YP_001193248.1 CDS Fjoh_0895 NC_009441.1 1010438 1011337 D hypothetical protein 1010438..1011337 Flavobacterium johnsoniae UW101 5091751 YP_001193249.1 CDS Fjoh_0896 NC_009441.1 1011496 1012287 D hypothetical protein 1011496..1012287 Flavobacterium johnsoniae UW101 5091752 YP_001193250.1 CDS Fjoh_0897 NC_009441.1 1012518 1013699 D PFAM: Ankyrin; ankyrin 1012518..1013699 Flavobacterium johnsoniae UW101 5091753 YP_001193251.1 CDS Fjoh_0898 NC_009441.1 1013729 1015081 D PFAM: Ankyrin; ankyrin 1013729..1015081 Flavobacterium johnsoniae UW101 5091754 YP_001193252.1 CDS Fjoh_0899 NC_009441.1 1015099 1015545 D hypothetical protein 1015099..1015545 Flavobacterium johnsoniae UW101 5091755 YP_001193253.1 CDS Fjoh_0900 NC_009441.1 1015715 1016269 D hypothetical protein 1015715..1016269 Flavobacterium johnsoniae UW101 5091756 YP_001193254.1 CDS Fjoh_0901 NC_009441.1 1016286 1017329 D hypothetical protein 1016286..1017329 Flavobacterium johnsoniae UW101 5091757 YP_001193255.1 CDS Fjoh_0902 NC_009441.1 1017380 1017610 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(1017380..1017610) Flavobacterium johnsoniae UW101 5091758 YP_001193256.1 CDS Fjoh_0903 NC_009441.1 1017610 1018851 R PFAM: peptidase U32; peptidase U32 complement(1017610..1018851) Flavobacterium johnsoniae UW101 5091759 YP_001193257.1 CDS Fjoh_0904 NC_009441.1 1019126 1019560 R hypothetical protein complement(1019126..1019560) Flavobacterium johnsoniae UW101 5091760 YP_001193258.1 CDS Fjoh_0905 NC_009441.1 1019585 1020973 R PFAM: Rhodanese domain protein; rhodanese domain-containing protein complement(1019585..1020973) Flavobacterium johnsoniae UW101 5091761 YP_001193259.1 CDS Fjoh_0906 NC_009441.1 1021209 1022384 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1021209..1022384 Flavobacterium johnsoniae UW101 5091762 YP_001193260.1 CDS Fjoh_0907 NC_009441.1 1022388 1025534 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 1022388..1025534 Flavobacterium johnsoniae UW101 5091763 YP_001193261.1 CDS Fjoh_0908 NC_009441.1 1025531 1026898 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 1025531..1026898 Flavobacterium johnsoniae UW101 5091764 YP_001193262.1 CDS Fjoh_0909 NC_009441.1 1027259 1027537 R hypothetical protein complement(1027259..1027537) Flavobacterium johnsoniae UW101 5091765 YP_001193263.1 CDS Fjoh_0910 NC_009441.1 1027644 1027931 R hypothetical protein complement(1027644..1027931) Flavobacterium johnsoniae UW101 5091324 YP_001193264.1 CDS Fjoh_0911 NC_009441.1 1028005 1028286 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(1028005..1028286) Flavobacterium johnsoniae UW101 5091325 YP_001193265.1 CDS Fjoh_0912 NC_009441.1 1028412 1029710 D PFAM: Fibronectin, type III domain protein; fibronectin, type III domain-containing protein 1028412..1029710 Flavobacterium johnsoniae UW101 5091326 YP_001193266.1 CDS Fjoh_0913 NC_009441.1 1029714 1030238 D hypothetical protein 1029714..1030238 Flavobacterium johnsoniae UW101 5091327 YP_001193267.1 CDS Fjoh_0914 NC_009441.1 1030269 1030700 D hypothetical protein 1030269..1030700 Flavobacterium johnsoniae UW101 5091328 YP_001193268.1 CDS Fjoh_0915 NC_009441.1 1030756 1030947 R hypothetical protein complement(1030756..1030947) Flavobacterium johnsoniae UW101 5091329 YP_001193269.1 CDS Fjoh_0916 NC_009441.1 1031001 1031306 R hypothetical protein complement(1031001..1031306) Flavobacterium johnsoniae UW101 5091330 YP_001193270.1 CDS Fjoh_0917 NC_009441.1 1031379 1032008 D phage-associated protein 1031379..1032008 Flavobacterium johnsoniae UW101 5091331 YP_001193271.1 CDS Fjoh_0918 NC_009441.1 1031995 1032399 D hypothetical protein 1031995..1032399 Flavobacterium johnsoniae UW101 5091332 YP_001193272.1 CDS Fjoh_0919 NC_009441.1 1032531 1033466 R hypothetical protein complement(1032531..1033466) Flavobacterium johnsoniae UW101 5091333 YP_001193273.1 CDS Fjoh_0920 NC_009441.1 1034305 1035342 D PFAM: protein of unknown function DUF955; hypothetical protein 1034305..1035342 Flavobacterium johnsoniae UW101 5091334 YP_001193274.1 CDS Fjoh_0921 NC_009441.1 1035424 1035894 D phage-associated protein 1035424..1035894 Flavobacterium johnsoniae UW101 5091335 YP_001193275.1 CDS Fjoh_0922 NC_009441.1 1035894 1036646 D hypothetical protein 1035894..1036646 Flavobacterium johnsoniae UW101 5091336 YP_001193276.1 CDS Fjoh_0923 NC_009441.1 1036977 1037627 D hypothetical protein 1036977..1037627 Flavobacterium johnsoniae UW101 5091337 YP_001193277.1 CDS Fjoh_0924 NC_009441.1 1038148 1038558 R PFAM: protein of unknown function DUF1094; hypothetical protein complement(1038148..1038558) Flavobacterium johnsoniae UW101 5091338 YP_001193278.1 CDS Fjoh_0925 NC_009441.1 1038698 1039129 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(1038698..1039129) Flavobacterium johnsoniae UW101 5091339 YP_001193279.1 CDS Fjoh_0926 NC_009441.1 1039292 1040461 R PFAM: Lycopene beta and epsilon cyclase; lycopene beta and epsilon cyclase complement(1039292..1040461) Flavobacterium johnsoniae UW101 5091340 YP_001193280.1 CDS Fjoh_0927 NC_009441.1 1040481 1040945 R hypothetical protein complement(1040481..1040945) Flavobacterium johnsoniae UW101 5091341 YP_001193281.1 CDS Fjoh_0928 NC_009441.1 1041110 1043362 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(1041110..1043362) Flavobacterium johnsoniae UW101 5091342 YP_001193282.1 CDS Fjoh_0929 NC_009441.1 1043559 1044464 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1043559..1044464) Flavobacterium johnsoniae UW101 5091343 YP_001193283.1 CDS Fjoh_0930 NC_009441.1 1044476 1044829 R hypothetical protein complement(1044476..1044829) Flavobacterium johnsoniae UW101 5091344 YP_001193284.1 CDS Fjoh_0931 NC_009441.1 1044925 1045317 D ferric uptake regulator family protein 1044925..1045317 Flavobacterium johnsoniae UW101 5091345 YP_001193285.1 CDS Fjoh_0932 NC_009441.1 1045392 1047260 D TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; UspA domain protein; Mn2+/Fe2+ transporter 1045392..1047260 Flavobacterium johnsoniae UW101 5091346 YP_001193286.1 CDS Fjoh_0933 NC_009441.1 1047354 1048007 D PFAM: iron dependent repressor; FeoA family protein; iron dependent repressor 1047354..1048007 Flavobacterium johnsoniae UW101 5091347 YP_001193287.1 CDS Fjoh_0934 NC_009441.1 1048057 1048542 R hypothetical protein complement(1048057..1048542) Flavobacterium johnsoniae UW101 5091348 YP_001193288.1 CDS Fjoh_0935 NC_009441.1 1048552 1048950 R hypothetical protein complement(1048552..1048950) Flavobacterium johnsoniae UW101 5091349 YP_001193289.1 CDS Fjoh_0936 NC_009441.1 1049119 1049901 R PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(1049119..1049901) Flavobacterium johnsoniae UW101 5091350 YP_001193290.1 CDS Fjoh_0937 NC_009441.1 1049913 1051328 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; histidine kinase complement(1049913..1051328) Flavobacterium johnsoniae UW101 5091351 YP_001193291.1 CDS Fjoh_0938 NC_009441.1 1051556 1052107 R PFAM: conserved hypothetical protein 701; hypothetical protein complement(1051556..1052107) Flavobacterium johnsoniae UW101 5091352 YP_001193292.1 CDS Fjoh_0939 NC_009441.1 1052141 1053154 R PFAM: ferrochelatase; ferrochelatase complement(1052141..1053154) Flavobacterium johnsoniae UW101 5091353 YP_001193293.1 CDS Fjoh_0940 NC_009441.1 1053280 1053645 R hypothetical protein complement(1053280..1053645) Flavobacterium johnsoniae UW101 5091354 YP_001193294.1 CDS Fjoh_0941 NC_009441.1 1053666 1054541 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(1053666..1054541) Flavobacterium johnsoniae UW101 5091355 YP_001193295.1 CDS Fjoh_0942 NC_009441.1 1054769 1056019 D PFAM: glutamyl-tRNA reductase; oxidoreductase domain protein; Shikimate/quinate 5-dehydrogenase; glutamyl-tRNA reductase 1054769..1056019 Flavobacterium johnsoniae UW101 5091356 YP_001193296.1 CDS Fjoh_0943 NC_009441.1 1056174 1056578 D hypothetical protein 1056174..1056578 Flavobacterium johnsoniae UW101 5091357 YP_001193297.1 CDS Fjoh_0944 NC_009441.1 1056762 1057685 D TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 1056762..1057685 Flavobacterium johnsoniae UW101 5091358 YP_001193298.1 CDS Fjoh_0945 NC_009441.1 1057685 1058350 D PFAM: Uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 1057685..1058350 Flavobacterium johnsoniae UW101 5091359 YP_001193299.1 CDS Fjoh_0946 NC_009441.1 1058440 1059465 D TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 1058440..1059465 Flavobacterium johnsoniae UW101 5091360 YP_001193300.1 CDS Fjoh_0947 NC_009441.1 1059543 1060220 D hypothetical protein 1059543..1060220 Flavobacterium johnsoniae UW101 5091361 YP_001193301.1 CDS Fjoh_0948 NC_009441.1 1060223 1060600 D hypothetical protein 1060223..1060600 Flavobacterium johnsoniae UW101 5091362 YP_001193302.1 CDS Fjoh_0949 NC_009441.1 1060603 1061148 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1060603..1061148 Flavobacterium johnsoniae UW101 5091363 YP_001193303.1 CDS Fjoh_0950 NC_009441.1 1061145 1062047 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1061145..1062047 Flavobacterium johnsoniae UW101 5091364 YP_001193304.1 CDS Fjoh_0951 NC_009441.1 1062949 1063407 D PFAM: transposase IS200-family protein; transposase IS200-family protein 1062949..1063407 Flavobacterium johnsoniae UW101 5091365 YP_001193305.1 CDS Fjoh_0952 NC_009441.1 1063501 1064439 D hypothetical protein 1063501..1064439 Flavobacterium johnsoniae UW101 5091366 YP_001193306.1 CDS Fjoh_0953 NC_009441.1 1064519 1065415 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 1064519..1065415 Flavobacterium johnsoniae UW101 5091367 YP_001193307.1 CDS Fjoh_0954 NC_009441.1 1065674 1067536 R hypothetical protein complement(1065674..1067536) Flavobacterium johnsoniae UW101 5091368 YP_001193308.1 CDS Fjoh_0955 NC_009441.1 1067540 1068172 R hypothetical protein complement(1067540..1068172) Flavobacterium johnsoniae UW101 5091369 YP_001193309.1 CDS Fjoh_0956 NC_009441.1 1068247 1068591 R hypothetical protein complement(1068247..1068591) Flavobacterium johnsoniae UW101 5091370 YP_001193310.1 CDS Fjoh_0957 NC_009441.1 1068872 1069867 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1068872..1069867 Flavobacterium johnsoniae UW101 5091371 YP_001193311.1 CDS Fjoh_0958 NC_009441.1 1069869 1070267 D cytochrome c551/c552-like protein 1069869..1070267 Flavobacterium johnsoniae UW101 5091372 YP_001193312.1 CDS Fjoh_0959 NC_009441.1 1071903 1073999 R PFAM: peptidase M13, neprilysin; peptidase M13; endothelin-converting protein 1 complement(1071903..1073999) Flavobacterium johnsoniae UW101 5091373 YP_001193313.1 CDS Fjoh_0960 NC_009441.1 1074253 1074918 D PFAM: electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 1074253..1074918 Flavobacterium johnsoniae UW101 5091374 YP_001193314.1 CDS Fjoh_0961 NC_009441.1 1075023 1075262 D PFAM: FeoA family protein; FeoA family protein 1075023..1075262 Flavobacterium johnsoniae UW101 5091375 YP_001193315.1 CDS Fjoh_0962 NC_009441.1 1075262 1077361 D TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; Miro domain protein; ferrous iron transport protein B 1075262..1077361 Flavobacterium johnsoniae UW101 5091376 YP_001193316.1 CDS Fjoh_0964 NC_009441.1 1079033 1079989 D hypothetical protein 1079033..1079989 Flavobacterium johnsoniae UW101 5094158 YP_001193317.1 CDS Fjoh_0965 NC_009441.1 1080138 1081085 D hypothetical protein 1080138..1081085 Flavobacterium johnsoniae UW101 5091378 YP_001193318.1 CDS Fjoh_0966 NC_009441.1 1081228 1082166 D hypothetical protein 1081228..1082166 Flavobacterium johnsoniae UW101 5090557 YP_001193319.1 CDS Fjoh_0967 NC_009441.1 1082565 1083218 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(1082565..1083218) Flavobacterium johnsoniae UW101 5090558 YP_001193320.1 CDS Fjoh_0968 NC_009441.1 1083607 1084599 R PFAM: fatty acid desaturase, type 2; acyl-ACP desaturase complement(1083607..1084599) Flavobacterium johnsoniae UW101 5090559 YP_001193321.1 CDS Fjoh_0969 NC_009441.1 1084645 1085391 R PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(1084645..1085391) Flavobacterium johnsoniae UW101 5090560 YP_001193322.1 CDS Fjoh_0970 NC_009441.1 1085518 1085916 D TIGRFAM: ribonuclease P protein component; ribonuclease P protein component 1085518..1085916 Flavobacterium johnsoniae UW101 5090561 YP_001193323.1 CDS Fjoh_0971 NC_009441.1 1085994 1086842 D hypothetical protein 1085994..1086842 Flavobacterium johnsoniae UW101 5090562 YP_001193324.1 CDS Fjoh_0972 NC_009441.1 1086839 1088476 D TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 1086839..1088476 Flavobacterium johnsoniae UW101 5090563 YP_001193325.1 CDS Fjoh_0973 NC_009441.1 1088480 1089283 D PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 1088480..1089283 Flavobacterium johnsoniae UW101 5090564 YP_001193326.1 CDS Fjoh_0974 NC_009441.1 1089519 1090160 R hypothetical protein complement(1089519..1090160) Flavobacterium johnsoniae UW101 5090565 YP_001193327.1 CDS Fjoh_0975 NC_009441.1 1090241 1091209 R hypothetical protein complement(1090241..1091209) Flavobacterium johnsoniae UW101 5090566 YP_001193328.1 CDS Fjoh_0976 NC_009441.1 1091258 1093090 R PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; lytic transglycosylase complement(1091258..1093090) Flavobacterium johnsoniae UW101 5090567 YP_001193329.1 CDS pgk NC_009441.1 1093201 1094388 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(1093201..1094388) Flavobacterium johnsoniae UW101 5090568 YP_001193330.1 CDS Fjoh_0978 NC_009441.1 1094605 1095606 R hypothetical protein complement(1094605..1095606) Flavobacterium johnsoniae UW101 5090569 YP_001193331.1 CDS Fjoh_0979 NC_009441.1 1095623 1115116 R hypothetical protein complement(1095623..1115116) Flavobacterium johnsoniae UW101 5090570 YP_001193332.1 CDS Fjoh_0980 NC_009441.1 1115242 1120008 R hypothetical protein complement(1115242..1120008) Flavobacterium johnsoniae UW101 5090571 YP_001193333.1 CDS Fjoh_0981 NC_009441.1 1120008 1121459 R hypothetical protein complement(1120008..1121459) Flavobacterium johnsoniae UW101 5090572 YP_001193334.1 CDS Fjoh_0982 NC_009441.1 1121456 1121869 R hypothetical protein complement(1121456..1121869) Flavobacterium johnsoniae UW101 5090573 YP_001193335.1 CDS Fjoh_0983 NC_009441.1 1121968 1123260 R hypothetical protein complement(1121968..1123260) Flavobacterium johnsoniae UW101 5090574 YP_001193336.1 CDS Fjoh_0984 NC_009441.1 1123448 1123900 R hypothetical protein complement(1123448..1123900) Flavobacterium johnsoniae UW101 5090575 YP_001193337.1 CDS Fjoh_0985 NC_009441.1 1124337 1125485 D DNA polymerase III gamma/tau subunits-like protein 1124337..1125485 Flavobacterium johnsoniae UW101 5090576 YP_001193338.1 CDS Fjoh_0986 NC_009441.1 1125493 1125876 D hypothetical protein 1125493..1125876 Flavobacterium johnsoniae UW101 5090577 YP_001193339.1 CDS Fjoh_0987 NC_009441.1 1125913 1126422 D PFAM: thioesterase superfamily protein; thioesterase superfamily protein 1125913..1126422 Flavobacterium johnsoniae UW101 5090578 YP_001193340.1 CDS Fjoh_0988 NC_009441.1 1126570 1127577 D TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 1126570..1127577 Flavobacterium johnsoniae UW101 5090579 YP_001193341.1 CDS Fjoh_0989 NC_009441.1 1128126 1128881 R PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(1128126..1128881) Flavobacterium johnsoniae UW101 5090580 YP_001193342.1 CDS Fjoh_0990 NC_009441.1 1129034 1130008 D TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 1129034..1130008 Flavobacterium johnsoniae UW101 5090581 YP_001193343.1 CDS Fjoh_0991 NC_009441.1 1130291 1130980 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(1130291..1130980) Flavobacterium johnsoniae UW101 5090582 YP_001193344.1 CDS Fjoh_0992 NC_009441.1 1130970 1132031 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(1130970..1132031) Flavobacterium johnsoniae UW101 5090583 YP_001193345.1 CDS Fjoh_0993 NC_009441.1 1132214 1133329 D PFAM: acyltransferase 3; acyltransferase 1132214..1133329 Flavobacterium johnsoniae UW101 5090584 YP_001193346.1 CDS Fjoh_0994 NC_009441.1 1133333 1133830 D hypothetical protein 1133333..1133830 Flavobacterium johnsoniae UW101 5090585 YP_001193347.1 CDS Fjoh_0995 NC_009441.1 1133838 1134938 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA complement(1133838..1134938) Flavobacterium johnsoniae UW101 5090586 YP_001193348.1 CDS Fjoh_0996 NC_009441.1 1135177 1136136 D PFAM: Sporulation domain protein; sporulation domain-containing protein 1135177..1136136 Flavobacterium johnsoniae UW101 5090587 YP_001193349.1 CDS Fjoh_0997 NC_009441.1 1136263 1136709 D hypothetical protein 1136263..1136709 Flavobacterium johnsoniae UW101 5090588 YP_001193350.1 CDS Fjoh_0998 NC_009441.1 1136756 1137514 R hypothetical protein complement(1136756..1137514) Flavobacterium johnsoniae UW101 5090589 YP_001193351.1 CDS Fjoh_0999 NC_009441.1 1137627 1139906 R SMART: AAA ATPase; ATPase AAA complement(1137627..1139906) Flavobacterium johnsoniae UW101 5090590 YP_001193352.1 CDS Fjoh_1000 NC_009441.1 1140015 1140593 R PFAM: outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(1140015..1140593) Flavobacterium johnsoniae UW101 5090591 YP_001193353.1 CDS Fjoh_1001 NC_009441.1 1141270 1142118 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(1141270..1142118) Flavobacterium johnsoniae UW101 5090592 YP_001193354.1 CDS Fjoh_1002 NC_009441.1 1142201 1142668 R hypothetical protein complement(1142201..1142668) Flavobacterium johnsoniae UW101 5090593 YP_001193355.1 CDS Fjoh_1003 NC_009441.1 1142775 1144646 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(1142775..1144646) Flavobacterium johnsoniae UW101 5090594 YP_001193356.1 CDS Fjoh_1004 NC_009441.1 1145329 1145748 R PFAM: protein of unknown function UPF0054; hypothetical protein complement(1145329..1145748) Flavobacterium johnsoniae UW101 5090595 YP_001193357.1 CDS Fjoh_1005 NC_009441.1 1145745 1149080 R hypothetical protein complement(1145745..1149080) Flavobacterium johnsoniae UW101 5090596 YP_001193358.1 CDS gltX NC_009441.1 1149303 1150808 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1149303..1150808 Flavobacterium johnsoniae UW101 5090597 YP_001193359.1 CDS Fjoh_1007 NC_009441.1 1151064 1152047 D PFAM: band 7 protein; hypothetical protein 1151064..1152047 Flavobacterium johnsoniae UW101 5090598 YP_001193360.1 CDS Fjoh_1008 NC_009441.1 1152068 1152322 R hypothetical protein complement(1152068..1152322) Flavobacterium johnsoniae UW101 5090599 YP_001193361.1 CDS Fjoh_1009 NC_009441.1 1152328 1152678 R hypothetical protein complement(1152328..1152678) Flavobacterium johnsoniae UW101 5090600 YP_001193362.1 CDS Fjoh_1010 NC_009441.1 1152752 1153078 R hypothetical protein complement(1152752..1153078) Flavobacterium johnsoniae UW101 5090601 YP_001193363.1 CDS Fjoh_1011 NC_009441.1 1153160 1153639 R hypothetical protein complement(1153160..1153639) Flavobacterium johnsoniae UW101 5090602 YP_001193364.1 CDS Fjoh_1012 NC_009441.1 1154944 1157061 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(1154944..1157061) Flavobacterium johnsoniae UW101 5090603 YP_001193365.1 CDS Fjoh_1013 NC_009441.1 1157434 1157730 D hypothetical protein 1157434..1157730 Flavobacterium johnsoniae UW101 5090604 YP_001193366.1 CDS Fjoh_1014 NC_009441.1 1157733 1158092 D PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 1157733..1158092 Flavobacterium johnsoniae UW101 5090605 YP_001193367.1 CDS Fjoh_1015 NC_009441.1 1158529 1159206 R PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA complement(1158529..1159206) Flavobacterium johnsoniae UW101 5094159 YP_001193368.1 CDS Fjoh_1016 NC_009441.1 1159221 1159889 R hypothetical protein complement(1159221..1159889) Flavobacterium johnsoniae UW101 5090607 YP_001193369.1 CDS Fjoh_1017 NC_009441.1 1159913 1162093 R TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; SMART: Cold shock protein; ribonuclease R complement(1159913..1162093) Flavobacterium johnsoniae UW101 5090608 YP_001193370.1 CDS Fjoh_1018 NC_009441.1 1162204 1162437 D hypothetical protein 1162204..1162437 Flavobacterium johnsoniae UW101 5090609 YP_001193371.1 CDS Fjoh_1019 NC_009441.1 1163253 1163684 D TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 1163253..1163684 Flavobacterium johnsoniae UW101 5090610 YP_001193372.1 CDS Fjoh_1020 NC_009441.1 1163840 1164109 R PFAM: protein of unknown function DUF1294; hypothetical protein complement(1163840..1164109) Flavobacterium johnsoniae UW101 5090611 YP_001193373.1 CDS Fjoh_1021 NC_009441.1 1164226 1166349 D PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; RNA-binding S1 domain-containing protein 1164226..1166349 Flavobacterium johnsoniae UW101 5092749 YP_001193374.1 CDS Fjoh_1022 NC_009441.1 1166421 1167818 R PFAM: glycoside hydrolase, family 8; licheninase complement(1166421..1167818) Flavobacterium johnsoniae UW101 5092750 YP_001193375.1 CDS Fjoh_1023 NC_009441.1 1167934 1168113 R TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin arginine-targeting protein translocase complement(1167934..1168113) Flavobacterium johnsoniae UW101 5092751 YP_001193376.1 CDS Fjoh_1024 NC_009441.1 1168324 1168827 D hypothetical protein 1168324..1168827 Flavobacterium johnsoniae UW101 5092752 YP_001193377.1 CDS Fjoh_1025 NC_009441.1 1168839 1170323 D PFAM: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter 1168839..1170323 Flavobacterium johnsoniae UW101 5092753 YP_001193378.1 CDS Fjoh_1026 NC_009441.1 1170342 1170680 D hypothetical protein 1170342..1170680 Flavobacterium johnsoniae UW101 5092754 YP_001193379.1 CDS Fjoh_1027 NC_009441.1 1170680 1171069 D hypothetical protein 1170680..1171069 Flavobacterium johnsoniae UW101 5092755 YP_001193380.1 CDS Fjoh_1028 NC_009441.1 1171150 1172868 D hypothetical protein 1171150..1172868 Flavobacterium johnsoniae UW101 5092756 YP_001193381.1 CDS Fjoh_1029 NC_009441.1 1172878 1173855 D hypothetical protein 1172878..1173855 Flavobacterium johnsoniae UW101 5092757 YP_001193382.1 CDS Fjoh_1030 NC_009441.1 1173890 1175086 D hypothetical protein 1173890..1175086 Flavobacterium johnsoniae UW101 5092758 YP_001193383.1 CDS Fjoh_1031 NC_009441.1 1175024 1176169 R hypothetical protein complement(1175024..1176169) Flavobacterium johnsoniae UW101 5092759 YP_001193384.1 CDS Fjoh_1032 NC_009441.1 1176238 1177140 R hypothetical protein complement(1176238..1177140) Flavobacterium johnsoniae UW101 5092760 YP_001193385.1 CDS Fjoh_1033 NC_009441.1 1177133 1178371 R PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1177133..1178371) Flavobacterium johnsoniae UW101 5092761 YP_001193386.1 CDS Fjoh_1034 NC_009441.1 1178417 1178665 R hypothetical protein complement(1178417..1178665) Flavobacterium johnsoniae UW101 5092762 YP_001193387.1 CDS Fjoh_1035 NC_009441.1 1178785 1179885 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1178785..1179885 Flavobacterium johnsoniae UW101 5092763 YP_001193388.1 CDS Fjoh_1036 NC_009441.1 1179866 1181002 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1179866..1181002 Flavobacterium johnsoniae UW101 5091766 YP_001193389.1 CDS Fjoh_1037 NC_009441.1 1181054 1182037 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1181054..1182037 Flavobacterium johnsoniae UW101 5091767 YP_001193390.1 CDS Fjoh_1038 NC_009441.1 1182095 1183282 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1182095..1183282) Flavobacterium johnsoniae UW101 5091768 YP_001193391.1 CDS Fjoh_1039 NC_009441.1 1183282 1184370 R PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(1183282..1184370) Flavobacterium johnsoniae UW101 5091769 YP_001193392.1 CDS Fjoh_1040 NC_009441.1 1184381 1185691 R coenzyme F390 synthetase-like protein complement(1184381..1185691) Flavobacterium johnsoniae UW101 5091770 YP_001193393.1 CDS Fjoh_1041 NC_009441.1 1185826 1187100 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1185826..1187100 Flavobacterium johnsoniae UW101 5091771 YP_001193394.1 CDS Fjoh_1042 NC_009441.1 1187140 1187370 R hypothetical protein complement(1187140..1187370) Flavobacterium johnsoniae UW101 5091772 YP_001193395.1 CDS Fjoh_1043 NC_009441.1 1187507 1188436 D hypothetical protein 1187507..1188436 Flavobacterium johnsoniae UW101 5091773 YP_001193396.1 CDS upp NC_009441.1 1188431 1189084 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(1188431..1189084) Flavobacterium johnsoniae UW101 5091774 YP_001193397.1 CDS Fjoh_1045 NC_009441.1 1189196 1189801 D hypothetical protein 1189196..1189801 Flavobacterium johnsoniae UW101 5091775 YP_001193398.1 CDS Fjoh_1046 NC_009441.1 1189845 1190852 D PFAM: glycosyl transferase, family 9; glycosyl transferase family protein 1189845..1190852 Flavobacterium johnsoniae UW101 5091776 YP_001193399.1 CDS Fjoh_1047 NC_009441.1 1191046 1191480 R hypothetical protein complement(1191046..1191480) Flavobacterium johnsoniae UW101 5091777 YP_001193400.1 CDS Fjoh_1048 NC_009441.1 1191757 1192809 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9, siderophore-interacting domain protein; ferredoxin complement(1191757..1192809) Flavobacterium johnsoniae UW101 5091778 YP_001193401.1 CDS Fjoh_1049 NC_009441.1 1192938 1194398 D hypothetical protein 1192938..1194398 Flavobacterium johnsoniae UW101 5091779 YP_001193402.1 CDS Fjoh_1050 NC_009441.1 1194439 1195134 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1194439..1195134 Flavobacterium johnsoniae UW101 5091780 YP_001193403.2 CDS Fjoh_1051 NC_009441.1 1195222 1197834 D PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; protein SprE 1195222..1197834 Flavobacterium johnsoniae UW101 5091781 YP_001193404.1 CDS Fjoh_1052 NC_009441.1 1197839 1198234 D PFAM: protein of unknown function DUF583; hypothetical protein 1197839..1198234 Flavobacterium johnsoniae UW101 5091782 YP_001193405.1 CDS Fjoh_1053 NC_009441.1 1198215 1198442 D hypothetical protein 1198215..1198442 Flavobacterium johnsoniae UW101 5091783 YP_001193406.1 CDS Fjoh_1054 NC_009441.1 1198492 1198884 D hypothetical protein 1198492..1198884 Flavobacterium johnsoniae UW101 5091784 YP_001193407.1 CDS Fjoh_1055 NC_009441.1 1199003 1200178 D TIGRFAM: ATP synthase F0, A subunit; PFAM: H+-transporting two-sector ATPase, A subunit; ATP synthase F0 subunit A 1199003..1200178 Flavobacterium johnsoniae UW101 5091785 YP_001193408.1 CDS Fjoh_1056 NC_009441.1 1200212 1200409 D PFAM: H+-transporting two-sector ATPase, C subunit; H+-transporting two-sector ATPase subunit C 1200212..1200409 Flavobacterium johnsoniae UW101 5091786 YP_001193409.1 CDS Fjoh_1057 NC_009441.1 1200499 1200999 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 1200499..1200999 Flavobacterium johnsoniae UW101 5091787 YP_001193410.1 CDS Fjoh_1058 NC_009441.1 1201004 1201537 D TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+-transporting two-sector ATPase, delta (OSCP) subunit; ATP synthase F1 subunit delta 1201004..1201537 Flavobacterium johnsoniae UW101 5091788 YP_001193411.1 CDS Fjoh_1059 NC_009441.1 1201575 1203152 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 1201575..1203152 Flavobacterium johnsoniae UW101 5091789 YP_001193412.1 CDS Fjoh_1060 NC_009441.1 1203236 1204096 D TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+-transporting two-sector ATPase, gamma subunit; ATP synthase F1 subunit gamma 1203236..1204096 Flavobacterium johnsoniae UW101 5091790 YP_001193413.1 CDS Fjoh_1061 NC_009441.1 1204688 1205134 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1204688..1205134 Flavobacterium johnsoniae UW101 5091791 YP_001193414.1 CDS Fjoh_1062 NC_009441.1 1205295 1206689 D PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; multi anti extrusion protein MatE 1205295..1206689 Flavobacterium johnsoniae UW101 5091792 YP_001193415.1 CDS dut NC_009441.1 1206718 1207152 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 1206718..1207152 Flavobacterium johnsoniae UW101 5091793 YP_001193416.1 CDS Fjoh_1064 NC_009441.1 1207284 1208300 D PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; nucleotidyl transferase 1207284..1208300 Flavobacterium johnsoniae UW101 5091794 YP_001193417.1 CDS Fjoh_1065 NC_009441.1 1208340 1209689 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 1208340..1209689 Flavobacterium johnsoniae UW101 5091795 YP_001193418.1 CDS Fjoh_1066 NC_009441.1 1209702 1210481 D hypothetical protein 1209702..1210481 Flavobacterium johnsoniae UW101 5091796 YP_001193419.1 CDS Fjoh_1067 NC_009441.1 1210506 1211759 D PFAM: peptidase M23B; peptidase M23B 1210506..1211759 Flavobacterium johnsoniae UW101 5091797 YP_001193420.1 CDS Fjoh_1068 NC_009441.1 1211790 1212209 R PFAM: CBS domain containing protein; hypothetical protein complement(1211790..1212209) Flavobacterium johnsoniae UW101 5091798 YP_001193421.1 CDS Fjoh_1069 NC_009441.1 1212382 1212774 D PFAM: ribosome-binding factor A; ribosome-binding factor A 1212382..1212774 Flavobacterium johnsoniae UW101 5091799 YP_001193422.1 CDS Fjoh_1070 NC_009441.1 1212863 1213975 D PFAM: protein of unknown function DUF214; hypothetical protein 1212863..1213975 Flavobacterium johnsoniae UW101 5091800 YP_001193423.1 CDS Fjoh_1071 NC_009441.1 1214147 1215574 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; MATE efflux family protein 1214147..1215574 Flavobacterium johnsoniae UW101 5091801 YP_001193424.1 CDS Fjoh_1072 NC_009441.1 1215651 1215971 D hypothetical protein 1215651..1215971 Flavobacterium johnsoniae UW101 5091802 YP_001193425.1 CDS Fjoh_1073 NC_009441.1 1216310 1216960 D hypothetical protein 1216310..1216960 Flavobacterium johnsoniae UW101 5091803 YP_001193426.1 CDS Fjoh_1074 NC_009441.1 1217046 1218044 R TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; nifR3 family TIM-barrel protein complement(1217046..1218044) Flavobacterium johnsoniae UW101 5091804 YP_001193427.1 CDS Fjoh_1075 NC_009441.1 1218315 1219604 R phenylacetate--CoA ligase complement(1218315..1219604) Flavobacterium johnsoniae UW101 5091805 YP_001193428.1 CDS Fjoh_1076 NC_009441.1 1219601 1221268 R PFAM: peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase complement(1219601..1221268) Flavobacterium johnsoniae UW101 5091806 YP_001193429.1 CDS Fjoh_1077 NC_009441.1 1221275 1222792 R all-trans-retinol 13,14-reductase complement(1221275..1222792) Flavobacterium johnsoniae UW101 5091807 YP_001193430.1 CDS Fjoh_1078 NC_009441.1 1222793 1226473 R PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(1222793..1226473) Flavobacterium johnsoniae UW101 5091808 YP_001193431.1 CDS Fjoh_1079 NC_009441.1 1226627 1227814 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(1226627..1227814) Flavobacterium johnsoniae UW101 5091809 YP_001193432.1 CDS Fjoh_1080 NC_009441.1 1227833 1228318 R hypothetical protein complement(1227833..1228318) Flavobacterium johnsoniae UW101 5091810 YP_001193433.1 CDS Fjoh_1081 NC_009441.1 1228321 1228692 R PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ complement(1228321..1228692) Flavobacterium johnsoniae UW101 5091811 YP_001193434.1 CDS Fjoh_1082 NC_009441.1 1228705 1229322 R hypothetical protein complement(1228705..1229322) Flavobacterium johnsoniae UW101 5091812 YP_001193435.1 CDS Fjoh_1083 NC_009441.1 1229322 1229924 R hypothetical protein complement(1229322..1229924) Flavobacterium johnsoniae UW101 5091813 YP_001193436.1 CDS Fjoh_1084 NC_009441.1 1229962 1230597 R hypothetical protein complement(1229962..1230597) Flavobacterium johnsoniae UW101 5091814 YP_001193437.1 CDS Fjoh_1085 NC_009441.1 1230563 1231189 R PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(1230563..1231189) Flavobacterium johnsoniae UW101 5091815 YP_001193438.1 CDS Fjoh_1086 NC_009441.1 1231299 1232084 R PFAM: polysaccharide deacetylase; polysaccharide deacetylase complement(1231299..1232084) Flavobacterium johnsoniae UW101 5091816 YP_001193439.1 CDS Fjoh_1087 NC_009441.1 1232081 1233142 R 3-oxoacyl-ACP synthase complement(1232081..1233142) Flavobacterium johnsoniae UW101 5091817 YP_001193440.1 CDS Fjoh_1088 NC_009441.1 1233144 1234343 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(1233144..1234343) Flavobacterium johnsoniae UW101 5091818 YP_001193441.1 CDS Fjoh_1089 NC_009441.1 1234486 1234743 R hypothetical protein complement(1234486..1234743) Flavobacterium johnsoniae UW101 5091819 YP_001193442.1 CDS Fjoh_1090 NC_009441.1 1234746 1235363 R hypothetical protein complement(1234746..1235363) Flavobacterium johnsoniae UW101 5091820 YP_001193443.1 CDS Fjoh_1091 NC_009441.1 1235390 1236388 R virulence protein-like protein complement(1235390..1236388) Flavobacterium johnsoniae UW101 5090169 YP_001193444.1 CDS Fjoh_1092 NC_009441.1 1236461 1237261 R hypothetical protein complement(1236461..1237261) Flavobacterium johnsoniae UW101 5090170 YP_001193445.1 CDS Fjoh_1093 NC_009441.1 1237258 1238397 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(1237258..1238397) Flavobacterium johnsoniae UW101 5090171 YP_001193446.1 CDS Fjoh_1094 NC_009441.1 1238507 1238956 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(1238507..1238956) Flavobacterium johnsoniae UW101 5090172 YP_001193447.1 CDS Fjoh_1095 NC_009441.1 1238931 1240214 R PFAM: ABC-2 type transporter; ABC-2 type transporter complement(1238931..1240214) Flavobacterium johnsoniae UW101 5090173 YP_001193448.1 CDS Fjoh_1096 NC_009441.1 1240204 1240956 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1240204..1240956) Flavobacterium johnsoniae UW101 5090174 YP_001193449.1 CDS Fjoh_1097 NC_009441.1 1240964 1241962 R hypothetical protein complement(1240964..1241962) Flavobacterium johnsoniae UW101 5090175 YP_001193450.1 CDS Fjoh_1098 NC_009441.1 1241963 1242367 R hypothetical protein complement(1241963..1242367) Flavobacterium johnsoniae UW101 5090176 YP_001193451.1 CDS Fjoh_1099 NC_009441.1 1242377 1242697 R hypothetical protein complement(1242377..1242697) Flavobacterium johnsoniae UW101 5090177 YP_001193452.1 CDS Fjoh_1100 NC_009441.1 1242690 1243097 R hypothetical protein complement(1242690..1243097) Flavobacterium johnsoniae UW101 5090178 YP_001193453.1 CDS Fjoh_1101 NC_009441.1 1243161 1243592 R hypothetical protein complement(1243161..1243592) Flavobacterium johnsoniae UW101 5090179 YP_001193454.1 CDS Fjoh_1102 NC_009441.1 1243592 1244725 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(1243592..1244725) Flavobacterium johnsoniae UW101 5090180 YP_001193455.1 CDS Fjoh_1103 NC_009441.1 1244743 1245645 R hypothetical protein complement(1244743..1245645) Flavobacterium johnsoniae UW101 5090181 YP_001193456.1 CDS Fjoh_1104 NC_009441.1 1245934 1246812 R PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase complement(1245934..1246812) Flavobacterium johnsoniae UW101 5090182 YP_001193457.1 CDS Fjoh_1105 NC_009441.1 1246812 1247066 R hypothetical protein complement(1246812..1247066) Flavobacterium johnsoniae UW101 5090183 YP_001193458.1 CDS Fjoh_1106 NC_009441.1 1247059 1248294 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(1247059..1248294) Flavobacterium johnsoniae UW101 5090184 YP_001193459.1 CDS Fjoh_1107 NC_009441.1 1248466 1249197 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(1248466..1249197) Flavobacterium johnsoniae UW101 5090185 YP_001193460.1 CDS Fjoh_1108 NC_009441.1 1249207 1250436 R PFAM: KWG Leptospira repeat protein; hypothetical protein complement(1249207..1250436) Flavobacterium johnsoniae UW101 5090186 YP_001193461.1 CDS Fjoh_1109 NC_009441.1 1250505 1252025 R PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase complement(1250505..1252025) Flavobacterium johnsoniae UW101 5090187 YP_001193462.1 CDS Fjoh_1110 NC_009441.1 1252127 1253377 D PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; tryptophan halogenase 1252127..1253377 Flavobacterium johnsoniae UW101 5090188 YP_001193463.1 CDS Fjoh_1111 NC_009441.1 1253606 1254211 R hypothetical protein complement(1253606..1254211) Flavobacterium johnsoniae UW101 5090189 YP_001193464.1 CDS Fjoh_1112 NC_009441.1 1254346 1256031 R TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS family solute/sodium (Na+) symporter complement(1254346..1256031) Flavobacterium johnsoniae UW101 5090190 YP_001193465.1 CDS Fjoh_1113 NC_009441.1 1256280 1257341 R TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase complement(1256280..1257341) Flavobacterium johnsoniae UW101 5090191 YP_001193466.1 CDS Fjoh_1114 NC_009441.1 1257355 1258515 R TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; galactokinase complement(1257355..1258515) Flavobacterium johnsoniae UW101 5090192 YP_001193467.1 CDS Fjoh_1115 NC_009441.1 1258537 1259592 R PFAM: Aldose 1-epimerase; aldose 1-epimerase complement(1258537..1259592) Flavobacterium johnsoniae UW101 5090193 YP_001193468.1 CDS Fjoh_1116 NC_009441.1 1259695 1260693 D PFAM: regulatory protein GntR, HTH; regulatory protein GntR 1259695..1260693 Flavobacterium johnsoniae UW101 5090194 YP_001193469.1 CDS Fjoh_1117 NC_009441.1 1260988 1261677 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(1260988..1261677) Flavobacterium johnsoniae UW101 5090195 YP_001193470.1 CDS Fjoh_1118 NC_009441.1 1262241 1263785 D PFAM: alpha-L-arabinofuranosidase domain protein; alpha-N-arabinofuranosidase 1262241..1263785 Flavobacterium johnsoniae UW101 5090196 YP_001193471.1 CDS Fjoh_1119 NC_009441.1 1264035 1265726 D catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 1264035..1265726 Flavobacterium johnsoniae UW101 5090197 YP_001193472.1 CDS araD NC_009441.1 1265710 1266411 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 1265710..1266411 Flavobacterium johnsoniae UW101 5090198 YP_001193473.1 CDS Fjoh_1121 NC_009441.1 1266535 1268043 D catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 1266535..1268043 Flavobacterium johnsoniae UW101 5090199 YP_001193474.1 CDS Fjoh_1122 NC_009441.1 1268151 1269329 D PFAM: Aldose 1-epimerase; aldose 1-epimerase 1268151..1269329 Flavobacterium johnsoniae UW101 5090200 YP_001193475.1 CDS Fjoh_1123 NC_009441.1 1269518 1272811 D PFAM: PKD domain containing protein; PKD domain-containing protein 1269518..1272811 Flavobacterium johnsoniae UW101 5090201 YP_001193476.1 CDS Fjoh_1124 NC_009441.1 1272838 1273302 D PFAM: OsmC family protein; OsmC family protein 1272838..1273302 Flavobacterium johnsoniae UW101 5090202 YP_001193477.1 CDS Fjoh_1125 NC_009441.1 1273365 1273784 R hypothetical protein complement(1273365..1273784) Flavobacterium johnsoniae UW101 5090203 YP_001193478.1 CDS Fjoh_1126 NC_009441.1 1274322 1275263 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1274322..1275263 Flavobacterium johnsoniae UW101 5094160 YP_001193479.1 CDS Fjoh_1127 NC_009441.1 1275383 1275994 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1275383..1275994 Flavobacterium johnsoniae UW101 5090205 YP_001193480.1 CDS Fjoh_1128 NC_009441.1 1276305 1276982 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1276305..1276982 Flavobacterium johnsoniae UW101 5090206 YP_001193481.1 CDS Fjoh_1129 NC_009441.1 1277123 1277734 D PFAM: manganese and iron superoxide dismutase; superoxide dismutase 1277123..1277734 Flavobacterium johnsoniae UW101 5090207 YP_001193482.1 CDS Fjoh_1130 NC_009441.1 1278580 1280478 R PFAM: glutamine amidotransferase, class-II; amidophosphoribosyltransferase complement(1278580..1280478) Flavobacterium johnsoniae UW101 5090208 YP_001193483.1 CDS Fjoh_1131 NC_009441.1 1280561 1281484 R PFAM: PfkB domain protein; ribokinase-like domain-containing protein complement(1280561..1281484) Flavobacterium johnsoniae UW101 5090209 YP_001193484.1 CDS Fjoh_1132 NC_009441.1 1281704 1282108 R hypothetical protein complement(1281704..1282108) Flavobacterium johnsoniae UW101 5090210 YP_001193485.1 CDS Fjoh_1133 NC_009441.1 1282092 1282679 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(1282092..1282679) Flavobacterium johnsoniae UW101 5090211 YP_001193486.1 CDS Fjoh_1134 NC_009441.1 1282984 1283331 D hypothetical protein 1282984..1283331 Flavobacterium johnsoniae UW101 5090212 YP_001193487.1 CDS Fjoh_1135 NC_009441.1 1283387 1283863 R PFAM: ribonuclease H; ribonuclease H complement(1283387..1283863) Flavobacterium johnsoniae UW101 5090213 YP_001193488.1 CDS Fjoh_1136 NC_009441.1 1283932 1284501 R TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase complement(1283932..1284501) Flavobacterium johnsoniae UW101 5090214 YP_001193489.1 CDS acpP NC_009441.1 1284677 1284913 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1284677..1284913 Flavobacterium johnsoniae UW101 5090215 YP_001193490.1 CDS Fjoh_1138 NC_009441.1 1285116 1286408 D PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase 1285116..1286408 Flavobacterium johnsoniae UW101 5090216 YP_001193491.1 CDS Fjoh_1139 NC_009441.1 1286418 1287158 D PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 1286418..1287158 Flavobacterium johnsoniae UW101 5090217 YP_001193492.1 CDS Fjoh_1140 NC_009441.1 1287284 1287772 D hypothetical protein 1287284..1287772 Flavobacterium johnsoniae UW101 5090218 YP_001193493.1 CDS Fjoh_1141 NC_009441.1 1287778 1289211 D PFAM: pyruvate kinase; pyruvate kinase 1287778..1289211 Flavobacterium johnsoniae UW101 5090219 YP_001193494.1 CDS Fjoh_1142 NC_009441.1 1289658 1291325 D PFAM: sulfatase; sulfatase 1289658..1291325 Flavobacterium johnsoniae UW101 5090220 YP_001193495.1 CDS Fjoh_1143 NC_009441.1 1291393 1292409 D hypothetical protein 1291393..1292409 Flavobacterium johnsoniae UW101 5090221 YP_001193496.1 CDS Fjoh_1144 NC_009441.1 1292503 1293318 D hypothetical protein 1292503..1293318 Flavobacterium johnsoniae UW101 5090222 YP_001193497.1 CDS Fjoh_1145 NC_009441.1 1293418 1294815 D hypothetical protein 1293418..1294815 Flavobacterium johnsoniae UW101 5090223 YP_001193498.1 CDS Fjoh_1146 NC_009441.1 1295103 1295681 D hypothetical protein 1295103..1295681 Flavobacterium johnsoniae UW101 5089692 YP_001193499.1 CDS Fjoh_1147 NC_009441.1 1295813 1297006 D SMART: helix-turn-helix- domain containing protein, AraC type; response regulator receiver protein 1295813..1297006 Flavobacterium johnsoniae UW101 5089693 YP_001193500.1 CDS Fjoh_1148 NC_009441.1 1297060 1298034 D meta-pathway phenol degradation-like protein 1297060..1298034 Flavobacterium johnsoniae UW101 5089694 YP_001193501.1 CDS Fjoh_1149 NC_009441.1 1298090 1299277 D hypothetical protein 1298090..1299277 Flavobacterium johnsoniae UW101 5089695 YP_001193502.1 CDS Fjoh_1150 NC_009441.1 1299364 1300224 R PFAM: Abortive infection protein; abortive infection protein complement(1299364..1300224) Flavobacterium johnsoniae UW101 5089696 YP_001193503.1 CDS Fjoh_1151 NC_009441.1 1300302 1301099 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(1300302..1301099) Flavobacterium johnsoniae UW101 5089697 YP_001193504.1 CDS Fjoh_1152 NC_009441.1 1301344 1302540 D PFAM: peptidase C1A, papain; peptidase C1B, bleomycin hydrolase; peptidase C1B, bleomycin hydrolase 1301344..1302540 Flavobacterium johnsoniae UW101 5089698 YP_001193505.1 CDS Fjoh_1153 NC_009441.1 1302728 1304428 R hypothetical protein complement(1302728..1304428) Flavobacterium johnsoniae UW101 5089699 YP_001193506.1 CDS Fjoh_1154 NC_009441.1 1304476 1305555 R hypothetical protein complement(1304476..1305555) Flavobacterium johnsoniae UW101 5089700 YP_001193507.1 CDS Fjoh_1155 NC_009441.1 1305777 1306166 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(1305777..1306166) Flavobacterium johnsoniae UW101 5089701 YP_001193508.1 CDS Fjoh_1156 NC_009441.1 1306448 1307146 D hypothetical protein 1306448..1307146 Flavobacterium johnsoniae UW101 5089702 YP_001193509.1 CDS Fjoh_1157 NC_009441.1 1307218 1307544 R hypothetical protein complement(1307218..1307544) Flavobacterium johnsoniae UW101 5089703 YP_001193510.1 CDS Fjoh_1158 NC_009441.1 1307713 1307994 R PFAM: Excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C complement(1307713..1307994) Flavobacterium johnsoniae UW101 5089704 YP_001193511.1 CDS Fjoh_1159 NC_009441.1 1309334 1310677 R PFAM: peptidase M50; peptidase M50 complement(1309334..1310677) Flavobacterium johnsoniae UW101 5094162 YP_001193512.1 CDS Fjoh_1160 NC_009441.1 1311018 1311338 D hypothetical protein 1311018..1311338 Flavobacterium johnsoniae UW101 5089706 YP_001193513.1 CDS Fjoh_1161 NC_009441.1 1311404 1311556 D hypothetical protein 1311404..1311556 Flavobacterium johnsoniae UW101 5089707 YP_001193514.1 CDS Fjoh_1162 NC_009441.1 1311569 1311733 D hypothetical protein 1311569..1311733 Flavobacterium johnsoniae UW101 5089708 YP_001193515.1 CDS Fjoh_1163 NC_009441.1 1312210 1313349 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 1312210..1313349 Flavobacterium johnsoniae UW101 5089709 YP_001193516.1 CDS Fjoh_1164 NC_009441.1 1313351 1315501 D PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin processing; SMART: AAA ATPase; ABC transporter-like protein 1313351..1315501 Flavobacterium johnsoniae UW101 5089710 YP_001193517.1 CDS Fjoh_1165 NC_009441.1 1315618 1316688 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1315618..1316688 Flavobacterium johnsoniae UW101 5089711 YP_001193518.1 CDS Fjoh_1166 NC_009441.1 1316876 1317916 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein 1316876..1317916 Flavobacterium johnsoniae UW101 5089712 YP_001193519.1 CDS Fjoh_1167 NC_009441.1 1318224 1319441 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 1318224..1319441 Flavobacterium johnsoniae UW101 5089713 YP_001193520.1 CDS Fjoh_1168 NC_009441.1 1319676 1322495 D PFAM: TonB-dependent receptor; TonB-dependent receptor 1319676..1322495 Flavobacterium johnsoniae UW101 5089714 YP_001193521.1 CDS Fjoh_1169 NC_009441.1 1322515 1323864 D hypothetical protein 1322515..1323864 Flavobacterium johnsoniae UW101 5089715 YP_001193522.1 CDS Fjoh_1170 NC_009441.1 1323991 1324848 D hypothetical protein 1323991..1324848 Flavobacterium johnsoniae UW101 5089716 YP_001193523.1 CDS Fjoh_1171 NC_009441.1 1324996 1326225 D PFAM: GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein 1324996..1326225 Flavobacterium johnsoniae UW101 5089717 YP_001193524.1 CDS Fjoh_1173 NC_009441.1 1327084 1328034 R hypothetical protein complement(1327084..1328034) Flavobacterium johnsoniae UW101 5094163 YP_001193525.1 CDS Fjoh_1174 NC_009441.1 1328112 1328621 R hypothetical protein complement(1328112..1328621) Flavobacterium johnsoniae UW101 5089719 YP_001193526.1 CDS Fjoh_1175 NC_009441.1 1328704 1329027 R PFAM: protein of unknown function DUF59; hypothetical protein complement(1328704..1329027) Flavobacterium johnsoniae UW101 5089720 YP_001193527.1 CDS Fjoh_1176 NC_009441.1 1329196 1329621 R PFAM: Fe-S metabolism associated SufE; Fe-S metabolism associated SufE complement(1329196..1329621) Flavobacterium johnsoniae UW101 5089721 YP_001193528.1 CDS Fjoh_1177 NC_009441.1 1329624 1330049 R hypothetical protein complement(1329624..1330049) Flavobacterium johnsoniae UW101 5089722 YP_001193529.1 CDS Fjoh_1178 NC_009441.1 1330063 1331277 R TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; SufS subfamily cysteine desulfurase complement(1330063..1331277) Flavobacterium johnsoniae UW101 5089723 YP_001193530.1 CDS Fjoh_1179 NC_009441.1 1331497 1332846 D PFAM: beta-lactamase; beta-lactamase 1331497..1332846 Flavobacterium johnsoniae UW101 5089724 YP_001193531.1 CDS Fjoh_1180 NC_009441.1 1332893 1334209 R TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; FeS assembly protein SufD complement(1332893..1334209) Flavobacterium johnsoniae UW101 5089725 YP_001193532.1 CDS Fjoh_1181 NC_009441.1 1334327 1334695 R PFAM: S23 ribosomal protein; S23 ribosomal protein complement(1334327..1334695) Flavobacterium johnsoniae UW101 5089726 YP_001193533.1 CDS Fjoh_1182 NC_009441.1 1334746 1335492 R TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC complement(1334746..1335492) Flavobacterium johnsoniae UW101 5089727 YP_001193534.1 CDS Fjoh_1183 NC_009441.1 1335504 1335992 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(1335504..1335992) Flavobacterium johnsoniae UW101 5089728 YP_001193535.1 CDS Fjoh_1184 NC_009441.1 1336000 1337448 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(1336000..1337448) Flavobacterium johnsoniae UW101 5089729 YP_001193536.1 CDS Fjoh_1185 NC_009441.1 1337528 1337857 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein complement(1337528..1337857) Flavobacterium johnsoniae UW101 5089730 YP_001193537.1 CDS Fjoh_1186 NC_009441.1 1338233 1339159 D hypothetical protein 1338233..1339159 Flavobacterium johnsoniae UW101 5089731 YP_001193538.1 CDS Fjoh_1187 NC_009441.1 1339244 1340101 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 1339244..1340101 Flavobacterium johnsoniae UW101 5089732 YP_001193539.1 CDS Fjoh_1188 NC_009441.1 1340181 1344350 R hypothetical protein complement(1340181..1344350) Flavobacterium johnsoniae UW101 5089733 YP_001193540.1 CDS Fjoh_1189 NC_009441.1 1344533 1349572 R PFAM: regulator of chromosome condensation, RCC1; leucine-rich repeat protein; regulator of chromosome condensation, RCC1 complement(1344533..1349572) Flavobacterium johnsoniae UW101 5089734 YP_001193541.1 CDS Fjoh_1190 NC_009441.1 1349849 1351483 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 1349849..1351483 Flavobacterium johnsoniae UW101 5089735 YP_001193542.1 CDS Fjoh_1191 NC_009441.1 1351506 1353428 D PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 1351506..1353428 Flavobacterium johnsoniae UW101 5089736 YP_001193543.1 CDS Fjoh_1192 NC_009441.1 1353617 1354171 D hypothetical protein 1353617..1354171 Flavobacterium johnsoniae UW101 5089737 YP_001193544.1 CDS Fjoh_1193 NC_009441.1 1354413 1355258 D hypothetical protein 1354413..1355258 Flavobacterium johnsoniae UW101 5089738 YP_001193545.1 CDS Fjoh_1194 NC_009441.1 1355264 1359307 D hypothetical protein 1355264..1359307 Flavobacterium johnsoniae UW101 5089739 YP_001193546.1 CDS Fjoh_1195 NC_009441.1 1359323 1360249 D hypothetical protein 1359323..1360249 Flavobacterium johnsoniae UW101 5089740 YP_001193547.1 CDS Fjoh_1196 NC_009441.1 1360648 1360914 D hypothetical protein 1360648..1360914 Flavobacterium johnsoniae UW101 5089741 YP_001193548.1 CDS Fjoh_1197 NC_009441.1 1360914 1361810 D hypothetical protein 1360914..1361810 Flavobacterium johnsoniae UW101 5089742 YP_001193549.1 CDS Fjoh_1198 NC_009441.1 1362047 1363246 R PFAM: protein of unknown function DUF405; protein of unknown function DUF418; hypothetical protein complement(1362047..1363246) Flavobacterium johnsoniae UW101 5089743 YP_001193550.1 CDS Fjoh_1199 NC_009441.1 1363395 1364591 R PFAM: protein of unknown function DUF405; protein of unknown function DUF418; hypothetical protein complement(1363395..1364591) Flavobacterium johnsoniae UW101 5089744 YP_001193551.1 CDS Fjoh_1200 NC_009441.1 1364768 1365706 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(1364768..1365706) Flavobacterium johnsoniae UW101 5089745 YP_001193552.1 CDS Fjoh_1201 NC_009441.1 1366004 1366612 D hypothetical protein 1366004..1366612 Flavobacterium johnsoniae UW101 5089746 YP_001193553.1 CDS Fjoh_1202 NC_009441.1 1366605 1369970 D TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor 1366605..1369970 Flavobacterium johnsoniae UW101 5089747 YP_001193554.1 CDS Fjoh_1203 NC_009441.1 1370115 1370738 D hypothetical protein 1370115..1370738 Flavobacterium johnsoniae UW101 5090003 YP_001193555.1 CDS Fjoh_1204 NC_009441.1 1371172 1371834 D hypothetical protein 1371172..1371834 Flavobacterium johnsoniae UW101 5090004 YP_001193556.1 CDS Fjoh_1205 NC_009441.1 1371864 1372325 D hypothetical protein 1371864..1372325 Flavobacterium johnsoniae UW101 5090005 YP_001193557.1 CDS Fjoh_1206 NC_009441.1 1372352 1372819 D hypothetical protein 1372352..1372819 Flavobacterium johnsoniae UW101 5090006 YP_001193558.1 CDS Fjoh_1207 NC_009441.1 1372986 1373540 D hypothetical protein 1372986..1373540 Flavobacterium johnsoniae UW101 5090007 YP_001193559.2 CDS Fjoh_1208 NC_009441.1 1373643 1376759 R PFAM: Ig domain protein, group 2 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycoside hydrolase complement(1373643..1376759) Flavobacterium johnsoniae UW101 5090008 YP_001193560.2 CDS Fjoh_1209 NC_009441.1 1377083 1379230 R Glycoside hydrolase family complement(1377083..1379230) Flavobacterium johnsoniae UW101 5090009 YP_001193561.1 CDS Fjoh_1210 NC_009441.1 1379312 1380694 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase catalytic subunit complement(1379312..1380694) Flavobacterium johnsoniae UW101 5090010 YP_001193562.1 CDS Fjoh_1211 NC_009441.1 1380800 1381882 R hypothetical protein complement(1380800..1381882) Flavobacterium johnsoniae UW101 5090011 YP_001193563.1 CDS Fjoh_1212 NC_009441.1 1381896 1383404 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(1381896..1383404) Flavobacterium johnsoniae UW101 5090012 YP_001193564.1 CDS Fjoh_1213 NC_009441.1 1383413 1386685 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(1383413..1386685) Flavobacterium johnsoniae UW101 5090013 YP_001193565.1 CDS Fjoh_1214 NC_009441.1 1386816 1387994 R PFAM: FecR protein; FecR anti-FecI sigma factor complement(1386816..1387994) Flavobacterium johnsoniae UW101 5090014 YP_001193566.1 CDS Fjoh_1215 NC_009441.1 1388550 1389113 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(1388550..1389113) Flavobacterium johnsoniae UW101 5090015 YP_001193567.1 CDS Fjoh_1216 NC_009441.1 1389501 1390157 R hypothetical protein complement(1389501..1390157) Flavobacterium johnsoniae UW101 5090016 YP_001193568.1 CDS Fjoh_1217 NC_009441.1 1390277 1390648 R PFAM: protein of unknown function UPF0102; hypothetical protein complement(1390277..1390648) Flavobacterium johnsoniae UW101 5090017 YP_001193569.1 CDS Fjoh_1218 NC_009441.1 1390812 1391711 R PFAM: peptidase U61, LD-carboxypeptidase A; peptidase U61, LD-carboxypeptidase A complement(1390812..1391711) Flavobacterium johnsoniae UW101 5090018 YP_001193570.1 CDS Fjoh_1219 NC_009441.1 1391851 1392924 R PFAM: beta-lactamase; beta-lactamase complement(1391851..1392924) Flavobacterium johnsoniae UW101 5090019 YP_001193571.1 CDS Fjoh_1220 NC_009441.1 1393064 1394155 D hypothetical protein 1393064..1394155 Flavobacterium johnsoniae UW101 5090020 YP_001193572.1 CDS Fjoh_1221 NC_009441.1 1394254 1394793 D catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde in the final enzymatic step of quinolinate biosynthesis; 3-hydroxyanthranilate 3,4-dioxygenase 1394254..1394793 Flavobacterium johnsoniae UW101 5090021 YP_001193573.1 CDS Fjoh_1222 NC_009441.1 1394932 1395243 D hypothetical protein 1394932..1395243 Flavobacterium johnsoniae UW101 5090022 YP_001193574.1 CDS Fjoh_1223 NC_009441.1 1395240 1395530 R hypothetical protein complement(1395240..1395530) Flavobacterium johnsoniae UW101 5090023 YP_001193575.1 CDS Fjoh_1224 NC_009441.1 1395651 1396610 R PFAM: cyclic-AMP phosphodiesterase, class-II; cyclic-AMP phosphodiesterase complement(1395651..1396610) Flavobacterium johnsoniae UW101 5090024 YP_001193576.1 CDS Fjoh_1225 NC_009441.1 1396793 1398346 D PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 1396793..1398346 Flavobacterium johnsoniae UW101 5090025 YP_001193577.1 CDS Fjoh_1226 NC_009441.1 1398450 1399196 D hypothetical protein 1398450..1399196 Flavobacterium johnsoniae UW101 5090026 YP_001193578.1 CDS Fjoh_1227 NC_009441.1 1399207 1400019 D hypothetical protein 1399207..1400019 Flavobacterium johnsoniae UW101 5090027 YP_001193579.1 CDS Fjoh_1228 NC_009441.1 1400059 1401102 D hypothetical protein 1400059..1401102 Flavobacterium johnsoniae UW101 5090028 YP_001193580.1 CDS Fjoh_1229 NC_009441.1 1401109 1401672 D PFAM: LemA family protein; LemA family protein 1401109..1401672 Flavobacterium johnsoniae UW101 5090029 YP_001193581.1 CDS Fjoh_1230 NC_009441.1 1401656 1402057 D hypothetical protein 1401656..1402057 Flavobacterium johnsoniae UW101 5090030 YP_001193582.1 CDS Fjoh_1231 NC_009441.1 1402120 1404879 R PFAM: Pectate lyase/Amb allergen; Pectate lyase/Amb allergen complement(1402120..1404879) Flavobacterium johnsoniae UW101 5090031 YP_001193583.1 CDS Fjoh_1232 NC_009441.1 1405312 1406085 R PFAM: protein of unknown function DUF1112; hypothetical protein complement(1405312..1406085) Flavobacterium johnsoniae UW101 5090032 YP_001193584.1 CDS Fjoh_1233 NC_009441.1 1406249 1407640 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N complement(1406249..1407640) Flavobacterium johnsoniae UW101 5090033 YP_001193585.1 CDS Fjoh_1234 NC_009441.1 1407720 1409171 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M complement(1407720..1409171) Flavobacterium johnsoniae UW101 5090034 YP_001193586.1 CDS Fjoh_1235 NC_009441.1 1409182 1411065 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L complement(1409182..1411065) Flavobacterium johnsoniae UW101 5090035 YP_001193587.1 CDS Fjoh_1236 NC_009441.1 1411073 1411393 R PFAM: NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase, chain 4L complement(1411073..1411393) Flavobacterium johnsoniae UW101 5090036 YP_001193588.1 CDS Fjoh_1237 NC_009441.1 1411393 1411932 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 complement(1411393..1411932) Flavobacterium johnsoniae UW101 5090037 YP_001193589.1 CDS Fjoh_1238 NC_009441.1 1411932 1412477 R TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH-quinone oxidoreductase subunit I complement(1411932..1412477) Flavobacterium johnsoniae UW101 5090038 YP_001193590.1 CDS Fjoh_1239 NC_009441.1 1412563 1413615 R PFAM: respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) complement(1412563..1413615) Flavobacterium johnsoniae UW101 5090039 YP_001193591.1 CDS Fjoh_1240 NC_009441.1 1413622 1414650 R PFAM: ferredoxin; ferredoxin complement(1413622..1414650) Flavobacterium johnsoniae UW101 5090040 YP_001193592.1 CDS Fjoh_1241 NC_009441.1 1414744 1416114 R TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH-quinone oxidoreductase subunit F complement(1414744..1416114) Flavobacterium johnsoniae UW101 5090041 YP_001193593.1 CDS Fjoh_1242 NC_009441.1 1416116 1416646 R TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH-quinone oxidoreductase complement(1416116..1416646) Flavobacterium johnsoniae UW101 5090042 YP_001193594.1 CDS Fjoh_1243 NC_009441.1 1416793 1418031 R PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (quinone) complement(1416793..1418031) Flavobacterium johnsoniae UW101 5090043 YP_001193595.1 CDS Fjoh_1244 NC_009441.1 1418050 1418571 R PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH dehydrogenase (ubiquinone), 30 kDa subunit complement(1418050..1418571) Flavobacterium johnsoniae UW101 5090044 YP_001193596.1 CDS Fjoh_1245 NC_009441.1 1418573 1419121 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(1418573..1419121) Flavobacterium johnsoniae UW101 5090045 YP_001193597.1 CDS Fjoh_1246 NC_009441.1 1419269 1419634 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 complement(1419269..1419634) Flavobacterium johnsoniae UW101 5090046 YP_001193598.1 CDS Fjoh_1247 NC_009441.1 1419876 1420070 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(1419876..1420070) Flavobacterium johnsoniae UW101 5090047 YP_001193599.1 CDS aspS NC_009441.1 1420376 1422127 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1420376..1422127) Flavobacterium johnsoniae UW101 5090048 YP_001193600.1 CDS Fjoh_1249 NC_009441.1 1422285 1423280 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1422285..1423280 Flavobacterium johnsoniae UW101 5090049 YP_001193601.1 CDS Fjoh_1250 NC_009441.1 1423491 1423838 D hypothetical protein 1423491..1423838 Flavobacterium johnsoniae UW101 5090050 YP_001193602.1 CDS Fjoh_1251 NC_009441.1 1423886 1424995 R PFAM: PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein complement(1423886..1424995) Flavobacterium johnsoniae UW101 5090051 YP_001193603.1 CDS Fjoh_1252 NC_009441.1 1425053 1426609 R PFAM: PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein complement(1425053..1426609) Flavobacterium johnsoniae UW101 5090052 YP_001193604.1 CDS Fjoh_1253 NC_009441.1 1426615 1426914 R hypothetical protein complement(1426615..1426914) Flavobacterium johnsoniae UW101 5090053 YP_001193605.1 CDS Fjoh_1254 NC_009441.1 1426929 1427261 R hypothetical protein complement(1426929..1427261) Flavobacterium johnsoniae UW101 5090054 YP_001193606.1 CDS Fjoh_1255 NC_009441.1 1427489 1428736 R TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase complement(1427489..1428736) Flavobacterium johnsoniae UW101 5090055 YP_001193607.1 CDS sucA NC_009441.1 1428820 1431594 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 complement(1428820..1431594) Flavobacterium johnsoniae UW101 5090056 YP_001193608.1 CDS Fjoh_1257 NC_009441.1 1431711 1432262 D hypothetical protein 1431711..1432262 Flavobacterium johnsoniae UW101 5090057 YP_001193609.1 CDS Fjoh_1258 NC_009441.1 1432374 1432727 R hypothetical protein complement(1432374..1432727) Flavobacterium johnsoniae UW101 5093962 YP_001193610.1 CDS Fjoh_1259 NC_009441.1 1432769 1433794 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; alanine racemase complement(1432769..1433794) Flavobacterium johnsoniae UW101 5093963 YP_001193611.1 CDS Fjoh_1260 NC_009441.1 1433998 1436598 D PFAM: TonB-dependent receptor; Cna B domain protein; TonB-dependent receptor, plug; TonB-dependent receptor 1433998..1436598 Flavobacterium johnsoniae UW101 5093964 YP_001193612.1 CDS Fjoh_1261 NC_009441.1 1436842 1438062 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 1436842..1438062 Flavobacterium johnsoniae UW101 5093965 YP_001193613.1 CDS Fjoh_1262 NC_009441.1 1438052 1439917 D PFAM: glycoside hydrolase, family 37; alpha,alpha-trehalase 1438052..1439917 Flavobacterium johnsoniae UW101 5093966 YP_001193614.1 CDS Fjoh_1263 NC_009441.1 1440056 1441030 R PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(1440056..1441030) Flavobacterium johnsoniae UW101 5093967 YP_001193615.1 CDS Fjoh_1264 NC_009441.1 1441297 1441818 D PFAM: YceI family protein; hypothetical protein 1441297..1441818 Flavobacterium johnsoniae UW101 5093968 YP_001193616.1 CDS Fjoh_1265 NC_009441.1 1441928 1442527 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1441928..1442527 Flavobacterium johnsoniae UW101 5093969 YP_001193617.1 CDS Fjoh_1266 NC_009441.1 1442616 1443950 D PFAM: outer membrane efflux protein; outer membrane efflux protein 1442616..1443950 Flavobacterium johnsoniae UW101 5093970 YP_001193618.1 CDS Fjoh_1267 NC_009441.1 1443960 1445027 D TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1443960..1445027 Flavobacterium johnsoniae UW101 5093971 YP_001193619.1 CDS Fjoh_1268 NC_009441.1 1445120 1448296 D PFAM: acriflavin resistance protein; acriflavin resistance protein 1445120..1448296 Flavobacterium johnsoniae UW101 5093972 YP_001193620.1 CDS Fjoh_1269 NC_009441.1 1448428 1451052 R hypothetical protein complement(1448428..1451052) Flavobacterium johnsoniae UW101 5093973 YP_001193621.1 CDS Fjoh_1270 NC_009441.1 1451104 1451541 R hypothetical protein complement(1451104..1451541) Flavobacterium johnsoniae UW101 5093974 YP_001193622.1 CDS Fjoh_1271 NC_009441.1 1451493 1454147 R hypothetical protein complement(1451493..1454147) Flavobacterium johnsoniae UW101 5093975 YP_001193623.1 CDS Fjoh_1272 NC_009441.1 1454240 1456192 R hypothetical protein complement(1454240..1456192) Flavobacterium johnsoniae UW101 5093976 YP_001193624.1 CDS Fjoh_1273 NC_009441.1 1456304 1457293 R hypothetical protein complement(1456304..1457293) Flavobacterium johnsoniae UW101 5093977 YP_001193625.1 CDS Fjoh_1274 NC_009441.1 1457372 1457671 R hypothetical protein complement(1457372..1457671) Flavobacterium johnsoniae UW101 5093978 YP_001193626.1 CDS Fjoh_1275 NC_009441.1 1457800 1458384 D ECF subfamily RNA polymerase sigma-24 factor 1457800..1458384 Flavobacterium johnsoniae UW101 5093979 YP_001193627.1 CDS Fjoh_1276 NC_009441.1 1458387 1459109 D hypothetical protein 1458387..1459109 Flavobacterium johnsoniae UW101 5093980 YP_001193628.1 CDS Fjoh_1277 NC_009441.1 1459237 1460880 D PFAM: peptidase S41; peptidase S41 1459237..1460880 Flavobacterium johnsoniae UW101 5093981 YP_001193629.1 CDS Fjoh_1278 NC_009441.1 1461078 1461857 D TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase 1461078..1461857 Flavobacterium johnsoniae UW101 5093982 YP_001193630.1 CDS Fjoh_1279 NC_009441.1 1461922 1463058 D PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1461922..1463058 Flavobacterium johnsoniae UW101 5093983 YP_001193631.1 CDS Fjoh_1280 NC_009441.1 1463048 1464076 D TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; type I L-asparaginase 1463048..1464076 Flavobacterium johnsoniae UW101 5093984 YP_001193632.1 CDS Fjoh_1281 NC_009441.1 1464318 1465559 R PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; major facilitator transporter complement(1464318..1465559) Flavobacterium johnsoniae UW101 5093985 YP_001193633.1 CDS Fjoh_1282 NC_009441.1 1465651 1466532 D PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 1465651..1466532 Flavobacterium johnsoniae UW101 5093986 YP_001193634.1 CDS Fjoh_1283 NC_009441.1 1466839 1467333 D hypothetical protein 1466839..1467333 Flavobacterium johnsoniae UW101 5094164 YP_001193635.1 CDS Fjoh_1284 NC_009441.1 1467421 1467804 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(1467421..1467804) Flavobacterium johnsoniae UW101 5093988 YP_001193636.1 CDS Fjoh_1285 NC_009441.1 1468163 1468669 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1468163..1468669) Flavobacterium johnsoniae UW101 5093989 YP_001193637.1 CDS Fjoh_1286 NC_009441.1 1468744 1469709 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1468744..1469709) Flavobacterium johnsoniae UW101 5093990 YP_001193638.1 CDS Fjoh_1287 NC_009441.1 1469785 1470603 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(1469785..1470603) Flavobacterium johnsoniae UW101 5093991 YP_001193639.1 CDS Fjoh_1288 NC_009441.1 1470669 1471433 R PFAM: lipolytic enzyme, G-D-S-L family; GDSL family lipase complement(1470669..1471433) Flavobacterium johnsoniae UW101 5093992 YP_001193640.1 CDS Fjoh_1289 NC_009441.1 1471496 1472278 R hypothetical protein complement(1471496..1472278) Flavobacterium johnsoniae UW101 5093993 YP_001193641.1 CDS Fjoh_1290 NC_009441.1 1472364 1473545 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase complement(1472364..1473545) Flavobacterium johnsoniae UW101 5093994 YP_001193642.1 CDS Fjoh_1291 NC_009441.1 1473717 1475474 D PFAM: helix-turn-helix- domain containing protein, AraC type; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; response regulator receiver protein 1473717..1475474 Flavobacterium johnsoniae UW101 5093995 YP_001193643.1 CDS Fjoh_1292 NC_009441.1 1475485 1475637 R hypothetical protein complement(1475485..1475637) Flavobacterium johnsoniae UW101 5093996 YP_001193644.1 CDS Fjoh_1293 NC_009441.1 1475693 1475830 R hypothetical protein complement(1475693..1475830) Flavobacterium johnsoniae UW101 5093997 YP_001193645.1 CDS Fjoh_1294 NC_009441.1 1476091 1477539 D hypothetical protein 1476091..1477539 Flavobacterium johnsoniae UW101 5093998 YP_001193646.1 CDS Fjoh_1295 NC_009441.1 1478506 1478697 D hypothetical protein 1478506..1478697 Flavobacterium johnsoniae UW101 5093999 YP_001193647.1 CDS Fjoh_1296 NC_009441.1 1478917 1481109 D PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin processing; SMART: AAA ATPase; ABC transporter-like protein 1478917..1481109 Flavobacterium johnsoniae UW101 5094000 YP_001193648.1 CDS Fjoh_1297 NC_009441.1 1481112 1482407 D hypothetical protein 1481112..1482407 Flavobacterium johnsoniae UW101 5094001 YP_001193649.1 CDS Fjoh_1298 NC_009441.1 1482433 1483359 D hypothetical protein 1482433..1483359 Flavobacterium johnsoniae UW101 5094002 YP_001193650.1 CDS Fjoh_1299 NC_009441.1 1483388 1484095 R PFAM: methyltransferase small; methyltransferase small complement(1483388..1484095) Flavobacterium johnsoniae UW101 5094003 YP_001193651.1 CDS Fjoh_1300 NC_009441.1 1484173 1484697 R TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA-processing protein RimM complement(1484173..1484697) Flavobacterium johnsoniae UW101 5094004 YP_001193652.1 CDS rpsP NC_009441.1 1484713 1485279 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(1484713..1485279) Flavobacterium johnsoniae UW101 5094005 YP_001193653.1 CDS Fjoh_1302 NC_009441.1 1485466 1485957 D hypothetical protein 1485466..1485957 Flavobacterium johnsoniae UW101 5094006 YP_001193654.1 CDS Fjoh_1303 NC_009441.1 1486084 1486428 D PFAM: RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 1486084..1486428 Flavobacterium johnsoniae UW101 5094007 YP_001193655.1 CDS Fjoh_1304 NC_009441.1 1486586 1487641 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(1486586..1487641) Flavobacterium johnsoniae UW101 5094008 YP_001193656.1 CDS Fjoh_1305 NC_009441.1 1487750 1489270 R PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase complement(1487750..1489270) Flavobacterium johnsoniae UW101 5094009 YP_001193657.1 CDS Fjoh_1306 NC_009441.1 1489519 1490115 R TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit complement(1489519..1490115) Flavobacterium johnsoniae UW101 5094010 YP_001193658.1 CDS Fjoh_1307 NC_009441.1 1490285 1491679 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(1490285..1491679) Flavobacterium johnsoniae UW101 5094011 YP_001193659.1 CDS Fjoh_1308 NC_009441.1 1492199 1493119 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(1492199..1493119) Flavobacterium johnsoniae UW101 5094012 YP_001193660.1 CDS Fjoh_1309 NC_009441.1 1493361 1494164 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(1493361..1494164) Flavobacterium johnsoniae UW101 5094013 YP_001193661.1 CDS Fjoh_1310 NC_009441.1 1494634 1499166 D TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; Exonuclease, RNase T and DNA polymerase III; SMART: phosphoesterase PHP domain protein; Exonuclease; DNA polymerase III subunit alpha 1494634..1499166 Flavobacterium johnsoniae UW101 5094014 YP_001193662.1 CDS Fjoh_1311 NC_009441.1 1499344 1500270 D hypothetical protein 1499344..1500270 Flavobacterium johnsoniae UW101 5094015 YP_001193663.1 CDS Fjoh_1312 NC_009441.1 1500369 1501364 R PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(1500369..1501364) Flavobacterium johnsoniae UW101 5094016 YP_001193664.1 CDS Fjoh_1313 NC_009441.1 1501658 1503760 R PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; prolyl oligopeptidase complement(1501658..1503760) Flavobacterium johnsoniae UW101 5092318 YP_001193665.1 CDS Fjoh_1314 NC_009441.1 1504007 1506214 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(1504007..1506214) Flavobacterium johnsoniae UW101 5092319 YP_001193666.1 CDS Fjoh_1315 NC_009441.1 1506371 1506730 R hypothetical protein complement(1506371..1506730) Flavobacterium johnsoniae UW101 5092320 YP_001193667.1 CDS Fjoh_1316 NC_009441.1 1506945 1507652 D hypothetical protein 1506945..1507652 Flavobacterium johnsoniae UW101 5092321 YP_001193668.1 CDS Fjoh_1317 NC_009441.1 1507647 1508252 R hypothetical protein complement(1507647..1508252) Flavobacterium johnsoniae UW101 5092322 YP_001193669.1 CDS Fjoh_1318 NC_009441.1 1508552 1511020 D TIGRFAM: alanine racemase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; alanine racemase domain protein; Mur ligase, middle domain protein; bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase 1508552..1511020 Flavobacterium johnsoniae UW101 5092323 YP_001193670.1 CDS Fjoh_1319 NC_009441.1 1511089 1511469 D TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 1511089..1511469 Flavobacterium johnsoniae UW101 5092324 YP_001193671.1 CDS Fjoh_1320 NC_009441.1 1511642 1512631 D TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; aspartate-semialdehyde dehydrogenase 1511642..1512631 Flavobacterium johnsoniae UW101 5092325 YP_001193672.1 CDS Fjoh_1321 NC_009441.1 1512804 1513643 D hypothetical protein 1512804..1513643 Flavobacterium johnsoniae UW101 5092326 YP_001193673.1 CDS Fjoh_1322 NC_009441.1 1513760 1514161 D hypothetical protein 1513760..1514161 Flavobacterium johnsoniae UW101 5092327 YP_001193674.1 CDS Fjoh_1323 NC_009441.1 1514205 1514714 D hypothetical protein 1514205..1514714 Flavobacterium johnsoniae UW101 5092328 YP_001193675.1 CDS Fjoh_1324 NC_009441.1 1514769 1515086 R PFAM: ferredoxin; ferredoxin complement(1514769..1515086) Flavobacterium johnsoniae UW101 5092329 YP_001193676.1 CDS Fjoh_1325 NC_009441.1 1515143 1515622 R hypothetical protein complement(1515143..1515622) Flavobacterium johnsoniae UW101 5092330 YP_001193677.1 CDS Fjoh_1326 NC_009441.1 1515836 1516075 R PFAM: nitrogen-fixing NifU domain protein; NifU domain-containing protein complement(1515836..1516075) Flavobacterium johnsoniae UW101 5092331 YP_001193678.1 CDS Fjoh_1327 NC_009441.1 1516150 1517280 R chromosome partitioning ATPase complement(1516150..1517280) Flavobacterium johnsoniae UW101 5092332 YP_001193679.1 CDS Fjoh_1328 NC_009441.1 1517658 1519277 D hypothetical protein 1517658..1519277 Flavobacterium johnsoniae UW101 5092333 YP_001193680.1 CDS Fjoh_1329 NC_009441.1 1519339 1521768 R PFAM: protein of unknown function DUF214; hypothetical protein complement(1519339..1521768) Flavobacterium johnsoniae UW101 5092334 YP_001193681.1 CDS Fjoh_1330 NC_009441.1 1521903 1522610 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1521903..1522610) Flavobacterium johnsoniae UW101 5092335 YP_001193682.1 CDS Fjoh_1331 NC_009441.1 1522714 1523952 R TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(1522714..1523952) Flavobacterium johnsoniae UW101 5092336 YP_001193683.1 CDS Fjoh_1332 NC_009441.1 1524110 1525453 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 1524110..1525453 Flavobacterium johnsoniae UW101 5092337 YP_001193684.1 CDS Fjoh_1333 NC_009441.1 1525587 1526912 D PFAM: ATP-binding region, ATPase domain protein domain protein; integral membrane sensor signal transduction histidine kinase 1525587..1526912 Flavobacterium johnsoniae UW101 5092338 YP_001193685.1 CDS Fjoh_1334 NC_009441.1 1526942 1527268 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(1526942..1527268) Flavobacterium johnsoniae UW101 5092339 YP_001193686.1 CDS Fjoh_1335 NC_009441.1 1527404 1528042 R PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA complement(1527404..1528042) Flavobacterium johnsoniae UW101 5092340 YP_001193687.1 CDS trmB NC_009441.1 1528082 1528759 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1528082..1528759) Flavobacterium johnsoniae UW101 5092341 YP_001193688.1 CDS Fjoh_1337 NC_009441.1 1529081 1530463 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; ammonium transporter complement(1529081..1530463) Flavobacterium johnsoniae UW101 5092342 YP_001193689.1 CDS Fjoh_1338 NC_009441.1 1530726 1531214 R hypothetical protein complement(1530726..1531214) Flavobacterium johnsoniae UW101 5092343 YP_001193690.1 CDS Fjoh_1339 NC_009441.1 1531471 1532139 D hypothetical protein 1531471..1532139 Flavobacterium johnsoniae UW101 5092344 YP_001193691.1 CDS Fjoh_1340 NC_009441.1 1532317 1532631 R hypothetical protein complement(1532317..1532631) Flavobacterium johnsoniae UW101 5092345 YP_001193692.1 CDS Fjoh_1341 NC_009441.1 1532972 1533208 D hypothetical protein 1532972..1533208 Flavobacterium johnsoniae UW101 5092346 YP_001193693.1 CDS Fjoh_1342 NC_009441.1 1533528 1535990 R hypothetical protein complement(1533528..1535990) Flavobacterium johnsoniae UW101 5092347 YP_001193694.1 CDS Fjoh_1343 NC_009441.1 1536234 1536551 D TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; thioredoxin 1536234..1536551 Flavobacterium johnsoniae UW101 5092348 YP_001193695.1 CDS Fjoh_1344 NC_009441.1 1536743 1538833 R PFAM: TPR repeat-containing protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: Tetratricopeptide domain protein; histidine kinase complement(1536743..1538833) Flavobacterium johnsoniae UW101 5092349 YP_001193696.1 CDS Fjoh_1345 NC_009441.1 1538834 1539538 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(1538834..1539538) Flavobacterium johnsoniae UW101 5092350 YP_001193697.1 CDS Fjoh_1346 NC_009441.1 1539741 1540304 D hypothetical protein 1539741..1540304 Flavobacterium johnsoniae UW101 5092351 YP_001193698.1 CDS Fjoh_1347 NC_009441.1 1540370 1540954 D hypothetical protein 1540370..1540954 Flavobacterium johnsoniae UW101 5092352 YP_001193699.1 CDS Fjoh_1348 NC_009441.1 1541091 1543667 D PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 1541091..1543667 Flavobacterium johnsoniae UW101 5092353 YP_001193700.1 CDS Fjoh_1349 NC_009441.1 1543664 1544590 D hypothetical protein 1543664..1544590 Flavobacterium johnsoniae UW101 5092354 YP_001193701.1 CDS Fjoh_1350 NC_009441.1 1545505 1546584 D hypothetical protein 1545505..1546584 Flavobacterium johnsoniae UW101 5094166 YP_001193702.1 CDS Fjoh_1351 NC_009441.1 1546568 1547287 D hypothetical protein 1546568..1547287 Flavobacterium johnsoniae UW101 5092356 YP_001193703.1 CDS Fjoh_1352 NC_009441.1 1547327 1548148 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 1547327..1548148 Flavobacterium johnsoniae UW101 5092357 YP_001193704.1 CDS Fjoh_1353 NC_009441.1 1548579 1549934 D PFAM: outer membrane efflux protein; outer membrane efflux protein 1548579..1549934 Flavobacterium johnsoniae UW101 5092358 YP_001193705.1 CDS Fjoh_1354 NC_009441.1 1550083 1551132 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 1550083..1551132 Flavobacterium johnsoniae UW101 5092359 YP_001193706.1 CDS Fjoh_1355 NC_009441.1 1551134 1552717 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 1551134..1552717 Flavobacterium johnsoniae UW101 5092360 YP_001193707.1 CDS Fjoh_1356 NC_009441.1 1552993 1553658 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 1552993..1553658 Flavobacterium johnsoniae UW101 5092361 YP_001193708.1 CDS Fjoh_1357 NC_009441.1 1553942 1554172 R PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(1553942..1554172) Flavobacterium johnsoniae UW101 5092362 YP_001193709.1 CDS Fjoh_1358 NC_009441.1 1554259 1554492 D hypothetical protein 1554259..1554492 Flavobacterium johnsoniae UW101 5092363 YP_001193710.1 CDS Fjoh_1359 NC_009441.1 1554674 1555228 D hypothetical protein 1554674..1555228 Flavobacterium johnsoniae UW101 5092364 YP_001193711.1 CDS Fjoh_1360 NC_009441.1 1555493 1556884 D PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase dimerisation domain-containing protein 1555493..1556884 Flavobacterium johnsoniae UW101 5094167 YP_001193712.1 CDS Fjoh_1361 NC_009441.1 1557318 1558280 D hypothetical protein 1557318..1558280 Flavobacterium johnsoniae UW101 5092366 YP_001193713.1 CDS Fjoh_1362 NC_009441.1 1558277 1558651 D PFAM: Penicillinase repressor; CopY family transcriptional regulator 1558277..1558651 Flavobacterium johnsoniae UW101 5092367 YP_001193714.1 CDS Fjoh_1363 NC_009441.1 1558729 1559868 D PFAM: peptidase M56, BlaR1; peptidase M56, BlaR1 1558729..1559868 Flavobacterium johnsoniae UW101 5092368 YP_001193715.1 CDS Fjoh_1364 NC_009441.1 1560005 1561369 R PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase complement(1560005..1561369) Flavobacterium johnsoniae UW101 5092369 YP_001193716.1 CDS Fjoh_1365 NC_009441.1 1561556 1561942 D PFAM: protein of unknown function DUF423; hypothetical protein 1561556..1561942 Flavobacterium johnsoniae UW101 5092370 YP_001193717.1 CDS Fjoh_1366 NC_009441.1 1562147 1563751 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1562147..1563751 Flavobacterium johnsoniae UW101 5092371 YP_001193718.1 CDS Fjoh_1367 NC_009441.1 1563877 1564935 R PFAM: phytase; phytase complement(1563877..1564935) Flavobacterium johnsoniae UW101 5092372 YP_001193719.1 CDS Fjoh_1368 NC_009441.1 1565010 1567898 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(1565010..1567898) Flavobacterium johnsoniae UW101 5093151 YP_001193720.1 CDS Fjoh_1369 NC_009441.1 1568060 1569160 D hypothetical protein 1568060..1569160 Flavobacterium johnsoniae UW101 5093152 YP_001193721.1 CDS Fjoh_1370 NC_009441.1 1569304 1570008 R hypothetical protein complement(1569304..1570008) Flavobacterium johnsoniae UW101 5093153 YP_001193722.1 CDS Fjoh_1371 NC_009441.1 1570080 1570451 R PFAM: protein of unknown function DUF419; hypothetical protein complement(1570080..1570451) Flavobacterium johnsoniae UW101 5093154 YP_001193723.1 CDS Fjoh_1372 NC_009441.1 1570458 1570808 R hypothetical protein complement(1570458..1570808) Flavobacterium johnsoniae UW101 5093155 YP_001193724.1 CDS Fjoh_1373 NC_009441.1 1570805 1571206 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1570805..1571206) Flavobacterium johnsoniae UW101 5093156 YP_001193725.1 CDS Fjoh_1374 NC_009441.1 1571366 1572151 R hypothetical protein complement(1571366..1572151) Flavobacterium johnsoniae UW101 5093157 YP_001193726.1 CDS Fjoh_1375 NC_009441.1 1572203 1572580 R hypothetical protein complement(1572203..1572580) Flavobacterium johnsoniae UW101 5093158 YP_001193727.1 CDS Fjoh_1376 NC_009441.1 1572696 1573850 R TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(1572696..1573850) Flavobacterium johnsoniae UW101 5093159 YP_001193728.1 CDS ruvC NC_009441.1 1573936 1574490 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(1573936..1574490) Flavobacterium johnsoniae UW101 5093160 YP_001193729.1 CDS Fjoh_1378 NC_009441.1 1574537 1575544 D hypothetical protein 1574537..1575544 Flavobacterium johnsoniae UW101 5093161 YP_001193730.1 CDS Fjoh_1379 NC_009441.1 1575541 1576644 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1575541..1576644 Flavobacterium johnsoniae UW101 5093162 YP_001193731.1 CDS Fjoh_1380 NC_009441.1 1576732 1577358 R hypothetical protein complement(1576732..1577358) Flavobacterium johnsoniae UW101 5093163 YP_001193732.1 CDS Fjoh_1381 NC_009441.1 1577466 1577951 R hypothetical protein complement(1577466..1577951) Flavobacterium johnsoniae UW101 5093164 YP_001193733.1 CDS Fjoh_1382 NC_009441.1 1578184 1578648 D PFAM: protein of unknown function DUF456; hypothetical protein 1578184..1578648 Flavobacterium johnsoniae UW101 5093165 YP_001193734.1 CDS Fjoh_1383 NC_009441.1 1578925 1579533 D hypothetical protein 1578925..1579533 Flavobacterium johnsoniae UW101 5093166 YP_001193735.1 CDS Fjoh_1384 NC_009441.1 1579599 1580507 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RNA-binding S4 domain-containing protein complement(1579599..1580507) Flavobacterium johnsoniae UW101 5093167 YP_001193736.1 CDS Fjoh_1385 NC_009441.1 1580672 1581628 R PFAM: UbiA prenyltransferase; UbiA prenyltransferase complement(1580672..1581628) Flavobacterium johnsoniae UW101 5093168 YP_001193737.1 CDS Fjoh_1386 NC_009441.1 1581690 1582280 R hypothetical protein complement(1581690..1582280) Flavobacterium johnsoniae UW101 5093169 YP_001193738.1 CDS Fjoh_1387 NC_009441.1 1582345 1583283 R mevalonate kinase-like protein complement(1582345..1583283) Flavobacterium johnsoniae UW101 5093170 YP_001193739.1 CDS Fjoh_1388 NC_009441.1 1583314 1583664 R hypothetical protein complement(1583314..1583664) Flavobacterium johnsoniae UW101 5093171 YP_001193740.1 CDS Fjoh_1389 NC_009441.1 1583693 1584799 R PFAM: GHMP kinase; GHMP kinase complement(1583693..1584799) Flavobacterium johnsoniae UW101 5093172 YP_001193741.1 CDS Fjoh_1390 NC_009441.1 1584947 1585423 D PFAM: TspO/MBR family protein; TspO and MBR like protein 1584947..1585423 Flavobacterium johnsoniae UW101 5093173 YP_001193742.1 CDS Fjoh_1391 NC_009441.1 1585345 1586079 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(1585345..1586079) Flavobacterium johnsoniae UW101 5093174 YP_001193743.1 CDS Fjoh_1392 NC_009441.1 1586140 1586721 R PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(1586140..1586721) Flavobacterium johnsoniae UW101 5093175 YP_001193744.1 CDS Fjoh_1393 NC_009441.1 1586741 1588111 R hypothetical protein complement(1586741..1588111) Flavobacterium johnsoniae UW101 5093176 YP_001193745.1 CDS Fjoh_1394 NC_009441.1 1588209 1589285 R hypothetical protein complement(1588209..1589285) Flavobacterium johnsoniae UW101 5093177 YP_001193746.1 CDS Fjoh_1395 NC_009441.1 1589370 1590017 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(1589370..1590017) Flavobacterium johnsoniae UW101 5093178 YP_001193747.1 CDS Fjoh_1396 NC_009441.1 1590024 1591232 R PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; hypothetical protein complement(1590024..1591232) Flavobacterium johnsoniae UW101 5093179 YP_001193748.1 CDS Fjoh_1397 NC_009441.1 1591427 1592110 R PFAM: glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(1591427..1592110) Flavobacterium johnsoniae UW101 5093180 YP_001193749.1 CDS Fjoh_1398 NC_009441.1 1592291 1593952 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase catalytic subunit complement(1592291..1593952) Flavobacterium johnsoniae UW101 5093181 YP_001193750.1 CDS Fjoh_1399 NC_009441.1 1594170 1596032 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase catalytic subunit complement(1594170..1596032) Flavobacterium johnsoniae UW101 5093182 YP_001193751.1 CDS Fjoh_1400 NC_009441.1 1596139 1598253 R hypothetical protein complement(1596139..1598253) Flavobacterium johnsoniae UW101 5093183 YP_001193752.1 CDS Fjoh_1401 NC_009441.1 1598477 1600780 R PFAM: glycoside hydrolase, family 65 domain protein; glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein; maltose phosphorylase complement(1598477..1600780) Flavobacterium johnsoniae UW101 5093184 YP_001193753.1 CDS Fjoh_1402 NC_009441.1 1600825 1601484 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; beta-phosphoglucomutase complement(1600825..1601484) Flavobacterium johnsoniae UW101 5093185 YP_001193754.1 CDS Fjoh_1403 NC_009441.1 1601477 1602994 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(1601477..1602994) Flavobacterium johnsoniae UW101 5093186 YP_001193755.1 CDS Fjoh_1404 NC_009441.1 1603168 1604199 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(1603168..1604199) Flavobacterium johnsoniae UW101 5093187 YP_001193756.1 CDS Fjoh_1405 NC_009441.1 1604435 1607416 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 1604435..1607416 Flavobacterium johnsoniae UW101 5093188 YP_001193757.1 CDS Fjoh_1406 NC_009441.1 1607452 1609056 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 1607452..1609056 Flavobacterium johnsoniae UW101 5093189 YP_001193758.1 CDS Fjoh_1407 NC_009441.1 1609076 1610176 D hypothetical protein 1609076..1610176 Flavobacterium johnsoniae UW101 5093190 YP_001193759.1 CDS Fjoh_1408 NC_009441.1 1610261 1613134 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase catalytic subunit 1610261..1613134 Flavobacterium johnsoniae UW101 5093191 YP_001193760.1 CDS Fjoh_1409 NC_009441.1 1613489 1614985 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator transporter complement(1613489..1614985) Flavobacterium johnsoniae UW101 5093192 YP_001193761.1 CDS Fjoh_1410 NC_009441.1 1615702 1617021 D PFAM: PKD domain containing protein; PKD domain-containing protein 1615702..1617021 Flavobacterium johnsoniae UW101 5093193 YP_001193762.1 CDS Fjoh_1411 NC_009441.1 1617439 1618173 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 1617439..1618173 Flavobacterium johnsoniae UW101 5094168 YP_001193763.1 CDS Fjoh_1412 NC_009441.1 1618166 1619395 D hypothetical protein 1618166..1619395 Flavobacterium johnsoniae UW101 5093195 YP_001193764.1 CDS Fjoh_1413 NC_009441.1 1619448 1620005 D PFAM: protein of unknown function DUF1239; hypothetical protein 1619448..1620005 Flavobacterium johnsoniae UW101 5093196 YP_001193765.1 CDS Fjoh_1414 NC_009441.1 1620205 1621464 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein 1620205..1621464 Flavobacterium johnsoniae UW101 5093197 YP_001193766.1 CDS Fjoh_1415 NC_009441.1 1621573 1623672 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1621573..1623672 Flavobacterium johnsoniae UW101 5093198 YP_001193767.1 CDS Fjoh_1416 NC_009441.1 1623962 1624408 D hypothetical protein 1623962..1624408 Flavobacterium johnsoniae UW101 5093199 YP_001193768.1 CDS Fjoh_1417 NC_009441.1 1624431 1625345 R hypothetical protein complement(1624431..1625345) Flavobacterium johnsoniae UW101 5093200 YP_001193769.1 CDS Fjoh_1418 NC_009441.1 1625438 1626751 R TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; hydroxymethylglutaryl-CoA reductase complement(1625438..1626751) Flavobacterium johnsoniae UW101 5093201 YP_001193770.1 CDS Fjoh_1419 NC_009441.1 1626932 1629103 D PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; peptidase S9B dipeptidylpeptidase IV subunit 1626932..1629103 Flavobacterium johnsoniae UW101 5093202 YP_001193771.1 CDS Fjoh_1420 NC_009441.1 1629141 1630817 D TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter 1629141..1630817 Flavobacterium johnsoniae UW101 5093203 YP_001193772.1 CDS Fjoh_1421 NC_009441.1 1630826 1632310 D TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter 1630826..1632310 Flavobacterium johnsoniae UW101 5093204 YP_001193773.1 CDS Fjoh_1422 NC_009441.1 1632367 1632834 D hypothetical protein 1632367..1632834 Flavobacterium johnsoniae UW101 5093205 YP_001193774.1 CDS Fjoh_1423 NC_009441.1 1633060 1633512 D hypothetical protein 1633060..1633512 Flavobacterium johnsoniae UW101 5092429 YP_001193775.1 CDS Fjoh_1424 NC_009441.1 1633780 1634229 D hypothetical protein 1633780..1634229 Flavobacterium johnsoniae UW101 5092430 YP_001193776.1 CDS Fjoh_1425 NC_009441.1 1634237 1636273 R PFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein complement(1634237..1636273) Flavobacterium johnsoniae UW101 5092431 YP_001193777.1 CDS Fjoh_1426 NC_009441.1 1636328 1636825 R PFAM: NLP/P60 protein; NLP/P60 protein complement(1636328..1636825) Flavobacterium johnsoniae UW101 5092432 YP_001193778.1 CDS Fjoh_1427 NC_009441.1 1636837 1637952 R TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase, family 19; lipid-A-disaccharide synthase complement(1636837..1637952) Flavobacterium johnsoniae UW101 5092433 YP_001193779.1 CDS Fjoh_1428 NC_009441.1 1637988 1638260 R hypothetical protein complement(1637988..1638260) Flavobacterium johnsoniae UW101 5092434 YP_001193780.1 CDS surE NC_009441.1 1638253 1639032 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(1638253..1639032) Flavobacterium johnsoniae UW101 5092435 YP_001193781.1 CDS Fjoh_1430 NC_009441.1 1639245 1641428 D TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 1639245..1641428 Flavobacterium johnsoniae UW101 5092436 YP_001193782.1 CDS Fjoh_1431 NC_009441.1 1641513 1642310 D PFAM: DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease 1641513..1642310 Flavobacterium johnsoniae UW101 5092437 YP_001193783.1 CDS Fjoh_1432 NC_009441.1 1642287 1642949 R PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(1642287..1642949) Flavobacterium johnsoniae UW101 5092438 YP_001193784.1 CDS Fjoh_1433 NC_009441.1 1643317 1644180 R PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor complement(1643317..1644180) Flavobacterium johnsoniae UW101 5092439 YP_001193785.1 CDS Fjoh_1434 NC_009441.1 1644344 1646071 R hypothetical protein complement(1644344..1646071) Flavobacterium johnsoniae UW101 5092440 YP_001193786.1 CDS Fjoh_1435 NC_009441.1 1646059 1647234 R hypothetical protein complement(1646059..1647234) Flavobacterium johnsoniae UW101 5092441 YP_001193787.1 CDS Fjoh_1436 NC_009441.1 1647305 1648498 R hypothetical protein complement(1647305..1648498) Flavobacterium johnsoniae UW101 5092442 YP_001193788.1 CDS Fjoh_1437 NC_009441.1 1648556 1649746 R hypothetical protein complement(1648556..1649746) Flavobacterium johnsoniae UW101 5092443 YP_001193789.1 CDS Fjoh_1438 NC_009441.1 1649754 1652540 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(1649754..1652540) Flavobacterium johnsoniae UW101 5092444 YP_001193790.1 CDS Fjoh_1439 NC_009441.1 1652546 1653154 R hypothetical protein complement(1652546..1653154) Flavobacterium johnsoniae UW101 5092445 YP_001193791.1 CDS Fjoh_1440 NC_009441.1 1653477 1653728 R hypothetical protein complement(1653477..1653728) Flavobacterium johnsoniae UW101 5092446 YP_001193792.1 CDS Fjoh_1441 NC_009441.1 1653918 1654664 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(1653918..1654664) Flavobacterium johnsoniae UW101 5092447 YP_001193793.1 CDS Fjoh_1442 NC_009441.1 1654666 1656396 R PFAM: TPR repeat-containing protein; ATP-binding region, ATPase domain protein domain protein; SMART: Tetratricopeptide domain protein; integral membrane sensor signal transduction histidine kinase complement(1654666..1656396) Flavobacterium johnsoniae UW101 5092448 YP_001193794.1 CDS Fjoh_1443 NC_009441.1 1656484 1656888 R hypothetical protein complement(1656484..1656888) Flavobacterium johnsoniae UW101 5092449 YP_001193795.1 CDS Fjoh_1444 NC_009441.1 1657114 1659258 R PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase complement(1657114..1659258) Flavobacterium johnsoniae UW101 5092450 YP_001193796.1 CDS rpsO NC_009441.1 1659438 1659704 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(1659438..1659704) Flavobacterium johnsoniae UW101 5092451 YP_001193797.1 CDS Fjoh_1446 NC_009441.1 1659890 1660585 R hypothetical protein complement(1659890..1660585) Flavobacterium johnsoniae UW101 5092452 YP_001193798.1 CDS Fjoh_1447 NC_009441.1 1660620 1661075 R GAF domain-containing protein complement(1660620..1661075) Flavobacterium johnsoniae UW101 5092453 YP_001193799.1 CDS Fjoh_1448 NC_009441.1 1661147 1661683 D hypothetical protein 1661147..1661683 Flavobacterium johnsoniae UW101 5092454 YP_001193800.1 CDS Fjoh_1449 NC_009441.1 1661673 1662119 D hypothetical protein 1661673..1662119 Flavobacterium johnsoniae UW101 5092455 YP_001193801.1 CDS Fjoh_1450 NC_009441.1 1662166 1662564 D hypothetical protein 1662166..1662564 Flavobacterium johnsoniae UW101 5092456 YP_001193802.1 CDS Fjoh_1451 NC_009441.1 1662676 1664682 D PFAM: TonB-dependent receptor; TonB-dependent receptor 1662676..1664682 Flavobacterium johnsoniae UW101 5092457 YP_001193803.1 CDS Fjoh_1452 NC_009441.1 1664770 1665114 D PFAM: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 1664770..1665114 Flavobacterium johnsoniae UW101 5092458 YP_001193804.1 CDS Fjoh_1453 NC_009441.1 1665243 1665923 D hypothetical protein 1665243..1665923 Flavobacterium johnsoniae UW101 5092459 YP_001193805.1 CDS Fjoh_1454 NC_009441.1 1666170 1667405 R PFAM: cell cycle protein; cell cycle protein complement(1666170..1667405) Flavobacterium johnsoniae UW101 5092460 YP_001193806.1 CDS Fjoh_1455 NC_009441.1 1667421 1669394 R PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase complement(1667421..1669394) Flavobacterium johnsoniae UW101 5092461 YP_001193807.1 CDS Fjoh_1456 NC_009441.1 1669391 1669897 R hypothetical protein complement(1669391..1669897) Flavobacterium johnsoniae UW101 5092462 YP_001193808.1 CDS Fjoh_1457 NC_009441.1 1669890 1670720 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(1669890..1670720) Flavobacterium johnsoniae UW101 5092463 YP_001193809.1 CDS Fjoh_1458 NC_009441.1 1670832 1671842 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(1670832..1671842) Flavobacterium johnsoniae UW101 5092464 YP_001193810.1 CDS purH NC_009441.1 1671918 1673444 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(1671918..1673444) Flavobacterium johnsoniae UW101 5092465 YP_001193811.1 CDS Fjoh_1460 NC_009441.1 1673609 1674856 D PFAM: protein of unknown function DUF214; hypothetical protein 1673609..1674856 Flavobacterium johnsoniae UW101 5092466 YP_001193812.1 CDS Fjoh_1461 NC_009441.1 1675022 1675564 R hypothetical protein complement(1675022..1675564) Flavobacterium johnsoniae UW101 5092467 YP_001193813.1 CDS Fjoh_1462 NC_009441.1 1675887 1676741 R TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(1675887..1676741) Flavobacterium johnsoniae UW101 5092468 YP_001193814.1 CDS Fjoh_1463 NC_009441.1 1676853 1677920 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase complement(1676853..1677920) Flavobacterium johnsoniae UW101 5092469 YP_001193815.1 CDS Fjoh_1464 NC_009441.1 1677981 1680536 R PFAM: surface antigen (D15); surface antigen (D15) complement(1677981..1680536) Flavobacterium johnsoniae UW101 5092470 YP_001193816.1 CDS Fjoh_1465 NC_009441.1 1680574 1681302 D PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; tRNA/rRNA methyltransferase SpoU 1680574..1681302 Flavobacterium johnsoniae UW101 5092471 YP_001193817.1 CDS Fjoh_1466 NC_009441.1 1681312 1682025 R hypothetical protein complement(1681312..1682025) Flavobacterium johnsoniae UW101 5092472 YP_001193818.1 CDS Fjoh_1467 NC_009441.1 1682027 1682758 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; ubiquinone/menaquinone biosynthesis methyltransferase complement(1682027..1682758) Flavobacterium johnsoniae UW101 5092473 YP_001193819.1 CDS Fjoh_1468 NC_009441.1 1683344 1683826 R PFAM: dihydrofolate reductase region; dihydrofolate reductase complement(1683344..1683826) Flavobacterium johnsoniae UW101 5092474 YP_001193820.1 CDS Fjoh_1469 NC_009441.1 1683839 1684183 R hypothetical protein complement(1683839..1684183) Flavobacterium johnsoniae UW101 5092475 YP_001193821.1 CDS Fjoh_1470 NC_009441.1 1684422 1684718 D PFAM: glycoside hydrolase, family 13 domain protein; glycoside hydrolase family protein 1684422..1684718 Flavobacterium johnsoniae UW101 5092476 YP_001193822.1 CDS thyA NC_009441.1 1684757 1685608 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(1684757..1685608) Flavobacterium johnsoniae UW101 5092477 YP_001193823.1 CDS Fjoh_1472 NC_009441.1 1685726 1686349 R PFAM: UvrB/UvrC protein; protein of unknown function DUF151; hypothetical protein complement(1685726..1686349) Flavobacterium johnsoniae UW101 5092478 YP_001193824.1 CDS Fjoh_1473 NC_009441.1 1686514 1687482 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha complement(1686514..1687482) Flavobacterium johnsoniae UW101 5092479 YP_001193825.1 CDS Fjoh_1474 NC_009441.1 1687621 1688367 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta complement(1687621..1688367) Flavobacterium johnsoniae UW101 5092480 YP_001193826.1 CDS Fjoh_1475 NC_009441.1 1688870 1689847 D PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 1688870..1689847 Flavobacterium johnsoniae UW101 5092481 YP_001193827.1 CDS Fjoh_1476 NC_009441.1 1689894 1692419 D hypothetical protein 1689894..1692419 Flavobacterium johnsoniae UW101 5092482 YP_001193828.1 CDS Fjoh_1477 NC_009441.1 1692672 1693271 D PFAM: HhH-GPD family protein; HhH-GPD family protein 1692672..1693271 Flavobacterium johnsoniae UW101 5092483 YP_001193829.1 CDS Fjoh_1478 NC_009441.1 1693405 1693935 D PFAM: Inorganic pyrophosphatase; inorganic diphosphatase 1693405..1693935 Flavobacterium johnsoniae UW101 5091224 YP_001193830.1 CDS hppA NC_009441.1 1694049 1696592 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 1694049..1696592 Flavobacterium johnsoniae UW101 5091225 YP_001193831.1 CDS Fjoh_1480 NC_009441.1 1696656 1697186 R hypothetical protein complement(1696656..1697186) Flavobacterium johnsoniae UW101 5091226 YP_001193832.1 CDS Fjoh_1481 NC_009441.1 1697471 1698781 D hypothetical protein 1697471..1698781 Flavobacterium johnsoniae UW101 5091227 YP_001193833.1 CDS Fjoh_1482 NC_009441.1 1698899 1699513 R PFAM: deoxynucleoside kinase; deoxynucleoside kinase complement(1698899..1699513) Flavobacterium johnsoniae UW101 5091228 YP_001193834.1 CDS Fjoh_1483 NC_009441.1 1699513 1700316 R hypothetical protein complement(1699513..1700316) Flavobacterium johnsoniae UW101 5091229 YP_001193835.1 CDS Fjoh_1484 NC_009441.1 1700550 1701437 D hypothetical protein 1700550..1701437 Flavobacterium johnsoniae UW101 5091230 YP_001193836.1 CDS Fjoh_1485 NC_009441.1 1701497 1704184 D hypothetical protein 1701497..1704184 Flavobacterium johnsoniae UW101 5091231 YP_001193837.1 CDS Fjoh_1486 NC_009441.1 1704278 1706542 D hypothetical protein 1704278..1706542 Flavobacterium johnsoniae UW101 5091232 YP_001193838.1 CDS Fjoh_1487 NC_009441.1 1706690 1708948 D hypothetical protein 1706690..1708948 Flavobacterium johnsoniae UW101 5091233 YP_001193839.1 CDS Fjoh_1488 NC_009441.1 1709010 1710782 R hypothetical protein complement(1709010..1710782) Flavobacterium johnsoniae UW101 5091234 YP_001193840.1 CDS Fjoh_1489 NC_009441.1 1710922 1712172 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(1710922..1712172) Flavobacterium johnsoniae UW101 5091235 YP_001193841.1 CDS Fjoh_1490 NC_009441.1 1712701 1715547 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 1712701..1715547 Flavobacterium johnsoniae UW101 5091236 YP_001193842.1 CDS Fjoh_1491 NC_009441.1 1716225 1717529 D TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; O-acetylhomoserine/O-acetylserine sulfhydrylase 1716225..1717529 Flavobacterium johnsoniae UW101 5091237 YP_001193843.1 CDS Fjoh_1492 NC_009441.1 1717595 1718728 D PFAM: homoserine dehydrogenase; homoserine dehydrogenase, NAD-binding; homoserine dehydrogenase 1717595..1718728 Flavobacterium johnsoniae UW101 5091238 YP_001193844.1 CDS Fjoh_1493 NC_009441.1 1719837 1720826 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 1719837..1720826 Flavobacterium johnsoniae UW101 5091239 YP_001193845.1 CDS Fjoh_1494 NC_009441.1 1720828 1723242 D TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; homoserine dehydrogenase; homoserine dehydrogenase, NAD-binding; aspartate kinase 1720828..1723242 Flavobacterium johnsoniae UW101 5091240 YP_001193846.1 CDS Fjoh_1495 NC_009441.1 1723332 1723757 D PFAM: OsmC family protein; OsmC family protein 1723332..1723757 Flavobacterium johnsoniae UW101 5091241 YP_001193847.1 CDS Fjoh_1496 NC_009441.1 1723900 1725072 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cystathionine gamma-lyase 1723900..1725072 Flavobacterium johnsoniae UW101 5091242 YP_001193848.1 CDS Fjoh_1497 NC_009441.1 1725233 1725724 D PFAM: RDD domain containing protein; RDD domain-containing protein 1725233..1725724 Flavobacterium johnsoniae UW101 5091243 YP_001193849.1 CDS Fjoh_1498 NC_009441.1 1725866 1726276 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 1725866..1726276 Flavobacterium johnsoniae UW101 5091244 YP_001193850.1 CDS Fjoh_1499 NC_009441.1 1726354 1727136 R PFAM: protein of unknown function DUF81; hypothetical protein complement(1726354..1727136) Flavobacterium johnsoniae UW101 5091245 YP_001193851.1 CDS Fjoh_1500 NC_009441.1 1727449 1728336 D PFAM: protein of unknown function DUF81; hypothetical protein 1727449..1728336 Flavobacterium johnsoniae UW101 5091246 YP_001193852.1 CDS Fjoh_1501 NC_009441.1 1728362 1729072 D TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase 1728362..1729072 Flavobacterium johnsoniae UW101 5091247 YP_001193853.1 CDS Fjoh_1502 NC_009441.1 1729307 1730206 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1729307..1730206 Flavobacterium johnsoniae UW101 5091248 YP_001193854.1 CDS Fjoh_1503 NC_009441.1 1730354 1731598 D TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; sulfate adenylyltransferase, large subunit 1730354..1731598 Flavobacterium johnsoniae UW101 5091249 YP_001193855.1 CDS Fjoh_1504 NC_009441.1 1731705 1733795 D PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; HEPN domain protein; sulfite reductase (ferredoxin) 1731705..1733795 Flavobacterium johnsoniae UW101 5091250 YP_001193856.1 CDS Fjoh_1505 NC_009441.1 1733788 1734561 D TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C-methyltransferase 1733788..1734561 Flavobacterium johnsoniae UW101 5091251 YP_001193857.1 CDS Fjoh_1506 NC_009441.1 1734726 1735310 D TIGRFAM: siroheme synthase; siroheme synthase 1734726..1735310 Flavobacterium johnsoniae UW101 5091252 YP_001193858.1 CDS Fjoh_1507 NC_009441.1 1735508 1736581 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1735508..1736581 Flavobacterium johnsoniae UW101 5091253 YP_001193859.1 CDS Fjoh_1508 NC_009441.1 1737381 1738385 D PFAM: homocysteine S-methyltransferase; homocysteine S-methyltransferase 1737381..1738385 Flavobacterium johnsoniae UW101 5091254 YP_001193860.1 CDS Fjoh_1509 NC_009441.1 1738650 1739066 D hypothetical protein 1738650..1739066 Flavobacterium johnsoniae UW101 5091255 YP_001193861.1 CDS Fjoh_1510 NC_009441.1 1739239 1741914 D TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase, DHPS; Methionine synthase, B12-binding module, cap domain protein; Vitamin B12 dependent methionine synthase, activation region; cobalamin B12-binding domain protein; methionine synthase 1739239..1741914 Flavobacterium johnsoniae UW101 5091256 YP_001193862.1 CDS Fjoh_1511 NC_009441.1 1741993 1742949 D TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1741993..1742949 Flavobacterium johnsoniae UW101 5091257 YP_001193863.1 CDS Fjoh_1512 NC_009441.1 1743131 1743784 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 1743131..1743784 Flavobacterium johnsoniae UW101 5091258 YP_001193864.1 CDS Fjoh_1513 NC_009441.1 1743972 1745195 D PFAM: sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1743972..1745195 Flavobacterium johnsoniae UW101 5091259 YP_001193865.1 CDS Fjoh_1514 NC_009441.1 1745308 1746711 D PFAM: Pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 1745308..1746711 Flavobacterium johnsoniae UW101 5091260 YP_001193866.1 CDS Fjoh_1515 NC_009441.1 1746798 1748915 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(1746798..1748915) Flavobacterium johnsoniae UW101 5091261 YP_001193867.1 CDS Fjoh_1516 NC_009441.1 1749304 1750200 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1749304..1750200) Flavobacterium johnsoniae UW101 5091262 YP_001193868.1 CDS Fjoh_1517 NC_009441.1 1750348 1750932 D hypothetical protein 1750348..1750932 Flavobacterium johnsoniae UW101 5091263 YP_001193869.1 CDS Fjoh_1518 NC_009441.1 1751126 1751707 D hypothetical protein 1751126..1751707 Flavobacterium johnsoniae UW101 5091264 YP_001193870.1 CDS Fjoh_1519 NC_009441.1 1751889 1754213 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(1751889..1754213) Flavobacterium johnsoniae UW101 5091265 YP_001193871.1 CDS Fjoh_1520 NC_009441.1 1754371 1754832 D PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator 1754371..1754832 Flavobacterium johnsoniae UW101 5091266 YP_001193872.1 CDS Fjoh_1521 NC_009441.1 1754952 1756298 D TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase, HD region; deoxyguanosinetriphosphate triphosphohydrolase 1754952..1756298 Flavobacterium johnsoniae UW101 5091267 YP_001193873.1 CDS Fjoh_1522 NC_009441.1 1756368 1757369 R hypothetical protein complement(1756368..1757369) Flavobacterium johnsoniae UW101 5091268 YP_001193874.1 CDS Fjoh_1523 NC_009441.1 1757404 1759191 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1757404..1759191) Flavobacterium johnsoniae UW101 5091269 YP_001193875.1 CDS Fjoh_1524 NC_009441.1 1759233 1759904 R hypothetical protein complement(1759233..1759904) Flavobacterium johnsoniae UW101 5091270 YP_001193876.1 CDS Fjoh_1525 NC_009441.1 1759966 1760409 D PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 1759966..1760409 Flavobacterium johnsoniae UW101 5091271 YP_001193877.1 CDS Fjoh_1526 NC_009441.1 1760484 1761146 D hypothetical protein 1760484..1761146 Flavobacterium johnsoniae UW101 5091272 YP_001193878.1 CDS Fjoh_1527 NC_009441.1 1761158 1761790 D hypothetical protein 1761158..1761790 Flavobacterium johnsoniae UW101 5091273 YP_001193879.1 CDS Fjoh_1528 NC_009441.1 1761796 1762383 R hypothetical protein complement(1761796..1762383) Flavobacterium johnsoniae UW101 5091274 YP_001193880.1 CDS Fjoh_1529 NC_009441.1 1762616 1768303 D PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin domain-containing protein 1762616..1768303 Flavobacterium johnsoniae UW101 5091275 YP_001193881.1 CDS Fjoh_1530 NC_009441.1 1768494 1770788 D TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; Penicillin-binding domain protein; penicillin-binding protein 1C 1768494..1770788 Flavobacterium johnsoniae UW101 5091276 YP_001193882.1 CDS Fjoh_1531 NC_009441.1 1770795 1771673 R hypothetical protein complement(1770795..1771673) Flavobacterium johnsoniae UW101 5091277 YP_001193883.1 CDS Fjoh_1532 NC_009441.1 1771736 1773367 R TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease complement(1771736..1773367) Flavobacterium johnsoniae UW101 5091278 YP_001193884.1 CDS Fjoh_1533 NC_009441.1 1773540 1773632 R hypothetical protein complement(1773540..1773632) Flavobacterium johnsoniae UW101 5092637 YP_001193885.1 CDS Fjoh_1534 NC_009441.1 1773661 1773951 R PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(1773661..1773951) Flavobacterium johnsoniae UW101 5092638 YP_001193886.1 CDS Fjoh_1535 NC_009441.1 1774092 1775126 D TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; A/G-specific adenine glycosylase 1774092..1775126 Flavobacterium johnsoniae UW101 5092639 YP_001193887.1 CDS Fjoh_1536 NC_009441.1 1775158 1775397 R hypothetical protein complement(1775158..1775397) Flavobacterium johnsoniae UW101 5092640 YP_001193888.1 CDS Fjoh_1537 NC_009441.1 1775418 1775756 R hypothetical protein complement(1775418..1775756) Flavobacterium johnsoniae UW101 5092641 YP_001193889.1 CDS Fjoh_1538 NC_009441.1 1775983 1776423 D TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 1775983..1776423 Flavobacterium johnsoniae UW101 5092642 YP_001193890.1 CDS Fjoh_1539 NC_009441.1 1776447 1777742 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein 1776447..1777742 Flavobacterium johnsoniae UW101 5092643 YP_001193891.1 CDS Fjoh_1540 NC_009441.1 1777743 1778303 D hypothetical protein 1777743..1778303 Flavobacterium johnsoniae UW101 5092644 YP_001193892.1 CDS Fjoh_1541 NC_009441.1 1778370 1778747 R PFAM: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein complement(1778370..1778747) Flavobacterium johnsoniae UW101 5092645 YP_001193893.1 CDS Fjoh_1542 NC_009441.1 1778849 1779715 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 1778849..1779715 Flavobacterium johnsoniae UW101 5092646 YP_001193894.1 CDS Fjoh_1543 NC_009441.1 1779914 1781962 R PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein complement(1779914..1781962) Flavobacterium johnsoniae UW101 5092647 YP_001193895.1 CDS Fjoh_1544 NC_009441.1 1781975 1783297 R PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein complement(1781975..1783297) Flavobacterium johnsoniae UW101 5092648 YP_001193896.1 CDS rplU NC_009441.1 1783569 1784012 D PFAM: ribosomal protein L21; 50S ribosomal protein L21 1783569..1784012 Flavobacterium johnsoniae UW101 5092649 YP_001193897.1 CDS rpmA NC_009441.1 1784037 1784297 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1784037..1784297 Flavobacterium johnsoniae UW101 5092650 YP_001193898.1 CDS Fjoh_1547 NC_009441.1 1784456 1785721 D hypothetical protein 1784456..1785721 Flavobacterium johnsoniae UW101 5092651 YP_001193899.1 CDS Fjoh_1548 NC_009441.1 1785791 1788550 R PFAM: AsmA family protein; AsmA family protein complement(1785791..1788550) Flavobacterium johnsoniae UW101 5092652 YP_001193900.1 CDS Fjoh_1549 NC_009441.1 1788600 1789181 R PFAM: tRNA--hydroxylase; tRNA--hydroxylase complement(1788600..1789181) Flavobacterium johnsoniae UW101 5092653 YP_001193901.1 CDS Fjoh_1550 NC_009441.1 1789295 1790539 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1789295..1790539 Flavobacterium johnsoniae UW101 5092654 YP_001193902.1 CDS Fjoh_1551 NC_009441.1 1790664 1792511 R PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase complement(1790664..1792511) Flavobacterium johnsoniae UW101 5092655 YP_001193903.1 CDS Fjoh_1552 NC_009441.1 1792606 1794243 R TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase complement(1792606..1794243) Flavobacterium johnsoniae UW101 5092656 YP_001193904.1 CDS Fjoh_1553 NC_009441.1 1794249 1795247 R PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase complement(1794249..1795247) Flavobacterium johnsoniae UW101 5092657 YP_001193905.1 CDS Fjoh_1554 NC_009441.1 1795408 1795890 R TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; cytidine deaminase complement(1795408..1795890) Flavobacterium johnsoniae UW101 5092658 YP_001193906.1 CDS Fjoh_1555 NC_009441.1 1795966 1797174 R hypothetical protein complement(1795966..1797174) Flavobacterium johnsoniae UW101 5092659 YP_001193907.1 CDS Fjoh_1556 NC_009441.1 1797216 1801052 R hypothetical protein complement(1797216..1801052) Flavobacterium johnsoniae UW101 5092660 YP_001193908.2 CDS Fjoh_1557 NC_009441.1 1801266 1802951 D PFAM: protein of unknown function DUF323; protein GldJ 1801266..1802951 Flavobacterium johnsoniae UW101 5092661 YP_001193909.1 CDS Fjoh_1558 NC_009441.1 1803065 1804351 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 1803065..1804351 Flavobacterium johnsoniae UW101 5092662 YP_001193910.1 CDS Fjoh_1559 NC_009441.1 1804386 1807265 R PFAM: regulatory protein, LuxR; Two component regulator propeller; Two component regulator three Y domain protein; two component regulator complement(1804386..1807265) Flavobacterium johnsoniae UW101 5092663 YP_001193911.1 CDS Fjoh_1560 NC_009441.1 1807610 1810759 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 1807610..1810759 Flavobacterium johnsoniae UW101 5092664 YP_001193912.1 CDS Fjoh_1561 NC_009441.1 1810778 1812313 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 1810778..1812313 Flavobacterium johnsoniae UW101 5092665 YP_001193913.1 CDS Fjoh_1562 NC_009441.1 1812535 1813998 D PFAM: glycoside hydrolase, family 30; glycoside hydrolase 1812535..1813998 Flavobacterium johnsoniae UW101 5092666 YP_001193914.1 CDS Fjoh_1563 NC_009441.1 1814033 1815496 D PFAM: glycoside hydrolase, family 30; glycoside hydrolase 1814033..1815496 Flavobacterium johnsoniae UW101 5092667 YP_001193915.1 CDS Fjoh_1564 NC_009441.1 1815530 1817797 D PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 protein 1815530..1817797 Flavobacterium johnsoniae UW101 5092668 YP_001193916.1 CDS Fjoh_1565 NC_009441.1 1817974 1818813 D PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 1817974..1818813 Flavobacterium johnsoniae UW101 5092669 YP_001193917.1 CDS Fjoh_1566 NC_009441.1 1818815 1820239 D PFAM: glycoside hydrolase, family 30; glucan endo-1,6-beta-glucosidase 1818815..1820239 Flavobacterium johnsoniae UW101 5092670 YP_001193918.1 CDS Fjoh_1567 NC_009441.1 1820251 1822482 D PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 protein 1820251..1822482 Flavobacterium johnsoniae UW101 5092671 YP_001193919.1 CDS Fjoh_1568 NC_009441.1 1822528 1824549 R hypothetical protein complement(1822528..1824549) Flavobacterium johnsoniae UW101 5092672 YP_001193920.1 CDS Fjoh_1569 NC_009441.1 1824713 1824967 R hypothetical protein complement(1824713..1824967) Flavobacterium johnsoniae UW101 5092673 YP_001193921.1 CDS Fjoh_1570 NC_009441.1 1825270 1826025 D PFAM: NUDIX hydrolase; NUDIX hydrolase 1825270..1826025 Flavobacterium johnsoniae UW101 5092674 YP_001193922.1 CDS Fjoh_1571 NC_009441.1 1826057 1826377 D hypothetical protein 1826057..1826377 Flavobacterium johnsoniae UW101 5092675 YP_001193923.1 CDS Fjoh_1572 NC_009441.1 1826383 1826991 R PFAM: 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase complement(1826383..1826991) Flavobacterium johnsoniae UW101 5092676 YP_001193924.1 CDS Fjoh_1573 NC_009441.1 1826978 1827223 R hypothetical protein complement(1826978..1827223) Flavobacterium johnsoniae UW101 5092677 YP_001193925.1 CDS Fjoh_1574 NC_009441.1 1827321 1828034 R hypothetical protein complement(1827321..1828034) Flavobacterium johnsoniae UW101 5092678 YP_001193926.1 CDS Fjoh_1575 NC_009441.1 1828162 1829010 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(1828162..1829010) Flavobacterium johnsoniae UW101 5092679 YP_001193927.1 CDS Fjoh_1576 NC_009441.1 1829134 1829466 R PFAM: small multidrug resistance protein; small multidrug resistance protein complement(1829134..1829466) Flavobacterium johnsoniae UW101 5092680 YP_001193928.1 CDS Fjoh_1577 NC_009441.1 1829513 1830592 R hypothetical protein complement(1829513..1830592) Flavobacterium johnsoniae UW101 5092681 YP_001193929.1 CDS Fjoh_1578 NC_009441.1 1830602 1830886 R hypothetical protein complement(1830602..1830886) Flavobacterium johnsoniae UW101 5092682 YP_001193930.1 CDS Fjoh_1579 NC_009441.1 1831077 1832393 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(1831077..1832393) Flavobacterium johnsoniae UW101 5092683 YP_001193931.1 CDS Fjoh_1580 NC_009441.1 1832748 1833398 D phosphopantetheinyl transferase-like protein 1832748..1833398 Flavobacterium johnsoniae UW101 5092684 YP_001193932.1 CDS Fjoh_1581 NC_009441.1 1833421 1833819 R PFAM: globin; globin complement(1833421..1833819) Flavobacterium johnsoniae UW101 5092685 YP_001193933.1 CDS Fjoh_1582 NC_009441.1 1833816 1834169 R hypothetical protein complement(1833816..1834169) Flavobacterium johnsoniae UW101 5092686 YP_001193934.1 CDS Fjoh_1583 NC_009441.1 1834185 1834781 R PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator complement(1834185..1834781) Flavobacterium johnsoniae UW101 5092687 YP_001193935.1 CDS Fjoh_1584 NC_009441.1 1834876 1835607 D PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase 1834876..1835607 Flavobacterium johnsoniae UW101 5092688 YP_001193936.1 CDS Fjoh_1585 NC_009441.1 1835632 1836255 D TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 1835632..1836255 Flavobacterium johnsoniae UW101 5092689 YP_001193937.1 CDS Fjoh_1586 NC_009441.1 1836216 1838330 D NAD metabolism ATPase/kinase-like protein 1836216..1838330 Flavobacterium johnsoniae UW101 5092690 YP_001193938.1 CDS Fjoh_1587 NC_009441.1 1838330 1838731 D protein chain release factor B-like protein 1838330..1838731 Flavobacterium johnsoniae UW101 5092691 YP_001193939.1 CDS Fjoh_1588 NC_009441.1 1839000 1841150 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 1839000..1841150 Flavobacterium johnsoniae UW101 5092692 YP_001193940.1 CDS Fjoh_1589 NC_009441.1 1841194 1841607 R hypothetical protein complement(1841194..1841607) Flavobacterium johnsoniae UW101 5090940 YP_001193941.1 CDS greA NC_009441.1 1841763 1842239 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1841763..1842239 Flavobacterium johnsoniae UW101 5090941 YP_001193942.1 CDS Fjoh_1591 NC_009441.1 1842299 1842688 D PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 1842299..1842688 Flavobacterium johnsoniae UW101 5090942 YP_001193943.1 CDS Fjoh_1592 NC_009441.1 1842753 1843907 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(1842753..1843907) Flavobacterium johnsoniae UW101 5090943 YP_001193944.1 CDS Fjoh_1593 NC_009441.1 1844067 1844942 D hypothetical protein 1844067..1844942 Flavobacterium johnsoniae UW101 5090944 YP_001193945.1 CDS Fjoh_1594 NC_009441.1 1844974 1845345 D hypothetical protein 1844974..1845345 Flavobacterium johnsoniae UW101 5090945 YP_001193946.1 CDS aat NC_009441.1 1845482 1846120 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1845482..1846120 Flavobacterium johnsoniae UW101 5090946 YP_001193947.1 CDS Fjoh_1596 NC_009441.1 1846123 1846917 D PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; MOSC domain-containing protein 1846123..1846917 Flavobacterium johnsoniae UW101 5090947 YP_001193948.1 CDS Fjoh_1597 NC_009441.1 1846914 1847624 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; UBA/THIF-type NAD/FAD binding protein complement(1846914..1847624) Flavobacterium johnsoniae UW101 5090948 YP_001193949.1 CDS Fjoh_1598 NC_009441.1 1847680 1848831 R TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; thiazole biosynthesis protein ThiH complement(1847680..1848831) Flavobacterium johnsoniae UW101 5090949 YP_001193950.1 CDS Fjoh_1599 NC_009441.1 1848930 1849706 R PFAM: thiazole biosynthesis family protein; thiazole biosynthesis family protein complement(1848930..1849706) Flavobacterium johnsoniae UW101 5090950 YP_001193951.1 CDS Fjoh_1600 NC_009441.1 1849687 1850325 R PFAM: thiamine monophosphate synthase; thiamine-phosphate diphosphorylase complement(1849687..1850325) Flavobacterium johnsoniae UW101 5090951 YP_001193952.1 CDS Fjoh_1601 NC_009441.1 1850315 1851070 R PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase complement(1850315..1851070) Flavobacterium johnsoniae UW101 5090952 YP_001193953.1 CDS Fjoh_1602 NC_009441.1 1851028 1851639 R PFAM: thiamine monophosphate synthase; thiamine monophosphate synthase complement(1851028..1851639) Flavobacterium johnsoniae UW101 5090953 YP_001193954.1 CDS Fjoh_1603 NC_009441.1 1851728 1853551 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(1851728..1853551) Flavobacterium johnsoniae UW101 5090954 YP_001193955.1 CDS Fjoh_1604 NC_009441.1 1853657 1853863 R TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS complement(1853657..1853863) Flavobacterium johnsoniae UW101 5090955 YP_001193956.1 CDS Fjoh_1605 NC_009441.1 1854148 1854708 R TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(1854148..1854708) Flavobacterium johnsoniae UW101 5090956 YP_001193957.1 CDS Fjoh_1606 NC_009441.1 1854785 1855216 R hypothetical protein complement(1854785..1855216) Flavobacterium johnsoniae UW101 5090957 YP_001193958.1 CDS Fjoh_1607 NC_009441.1 1855404 1856063 R TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; hypothetical protein complement(1855404..1856063) Flavobacterium johnsoniae UW101 5090958 YP_001193959.1 CDS Fjoh_1608 NC_009441.1 1856220 1858283 D PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; peptidyl-dipeptidase Dcp 1856220..1858283 Flavobacterium johnsoniae UW101 5090959 YP_001193960.1 CDS Fjoh_1609 NC_009441.1 1858344 1859306 R TIGRFAM: translation elongation factor Ts; PFAM: ubiquitin-associated- domain-containing protein; elongation factor Ts; translation elongation factor Ts complement(1858344..1859306) Flavobacterium johnsoniae UW101 5090960 YP_001193961.1 CDS rpsB NC_009441.1 1859447 1860211 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1859447..1860211) Flavobacterium johnsoniae UW101 5090961 YP_001193962.1 CDS rpsI NC_009441.1 1860440 1860826 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(1860440..1860826) Flavobacterium johnsoniae UW101 5090962 YP_001193963.1 CDS rplM NC_009441.1 1860826 1861281 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(1860826..1861281) Flavobacterium johnsoniae UW101 5090963 YP_001193964.1 CDS Fjoh_1613 NC_009441.1 1861477 1862289 R hypothetical protein complement(1861477..1862289) Flavobacterium johnsoniae UW101 5090964 YP_001193965.1 CDS Fjoh_1614 NC_009441.1 1862314 1863060 R hypothetical protein complement(1862314..1863060) Flavobacterium johnsoniae UW101 5090965 YP_001193966.1 CDS Fjoh_1615 NC_009441.1 1863258 1864283 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 1863258..1864283 Flavobacterium johnsoniae UW101 5090966 YP_001193967.1 CDS Fjoh_1616 NC_009441.1 1864326 1865441 R hypothetical protein complement(1864326..1865441) Flavobacterium johnsoniae UW101 5090967 YP_001193968.1 CDS Fjoh_1617 NC_009441.1 1865596 1868445 R TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; DNA polymerase I complement(1865596..1868445) Flavobacterium johnsoniae UW101 5090968 YP_001193969.1 CDS Fjoh_1618 NC_009441.1 1868701 1868898 D hypothetical protein 1868701..1868898 Flavobacterium johnsoniae UW101 5090969 YP_001193970.1 CDS Fjoh_1619 NC_009441.1 1868951 1869133 D hypothetical protein 1868951..1869133 Flavobacterium johnsoniae UW101 5090970 YP_001193971.1 CDS Fjoh_1620 NC_009441.1 1869309 1869995 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 1869309..1869995 Flavobacterium johnsoniae UW101 5090971 YP_001193972.1 CDS Fjoh_1621 NC_009441.1 1870078 1871343 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; histidine kinase 1870078..1871343 Flavobacterium johnsoniae UW101 5090972 YP_001193973.1 CDS Fjoh_1622 NC_009441.1 1871447 1871629 D hypothetical protein 1871447..1871629 Flavobacterium johnsoniae UW101 5090973 YP_001193974.1 CDS Fjoh_1623 NC_009441.1 1871787 1873022 D PFAM: metallophosphoesterase; metallophosphoesterase 1871787..1873022 Flavobacterium johnsoniae UW101 5090974 YP_001193975.1 CDS Fjoh_1624 NC_009441.1 1873094 1873396 D PFAM: Thioredoxin domain; thioredoxin domain-containing protein 1873094..1873396 Flavobacterium johnsoniae UW101 5090975 YP_001193976.1 CDS Fjoh_1625 NC_009441.1 1873419 1874057 R PFAM: polysaccharide deacetylase; polysaccharide deacetylase complement(1873419..1874057) Flavobacterium johnsoniae UW101 5090976 YP_001193977.1 CDS Fjoh_1626 NC_009441.1 1874149 1877430 R hypothetical protein complement(1874149..1877430) Flavobacterium johnsoniae UW101 5090977 YP_001193978.1 CDS Fjoh_1627 NC_009441.1 1878582 1879406 R PFAM: UspA domain protein; UspA domain-containing protein complement(1878582..1879406) Flavobacterium johnsoniae UW101 5093541 YP_001193979.1 CDS Fjoh_1628 NC_009441.1 1879544 1880044 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1879544..1880044 Flavobacterium johnsoniae UW101 5090979 YP_001193980.1 CDS nusA NC_009441.1 1880058 1881311 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1880058..1881311 Flavobacterium johnsoniae UW101 5090980 YP_001193981.1 CDS infB NC_009441.1 1881370 1884240 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1881370..1884240 Flavobacterium johnsoniae UW101 5090981 YP_001193982.1 CDS Fjoh_1631 NC_009441.1 1884470 1885231 D PFAM: phosphoesterase, PA-phosphatase related; acid phosphatase 1884470..1885231 Flavobacterium johnsoniae UW101 5090982 YP_001193983.1 CDS Fjoh_1632 NC_009441.1 1885287 1885799 D hypothetical protein 1885287..1885799 Flavobacterium johnsoniae UW101 5090983 YP_001193984.1 CDS Fjoh_1633 NC_009441.1 1885884 1886273 R PFAM: Sporulation domain protein; sporulation domain-containing protein complement(1885884..1886273) Flavobacterium johnsoniae UW101 5090984 YP_001193985.1 CDS Fjoh_1634 NC_009441.1 1886493 1887827 D PFAM: cytochrome c, class I; cytochrome c, class I 1886493..1887827 Flavobacterium johnsoniae UW101 5090985 YP_001193986.1 CDS Fjoh_1635 NC_009441.1 1887860 1890919 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1887860..1890919 Flavobacterium johnsoniae UW101 5090986 YP_001193987.1 CDS Fjoh_1636 NC_009441.1 1890954 1892354 D PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD 1890954..1892354 Flavobacterium johnsoniae UW101 5090987 YP_001193988.1 CDS Fjoh_1637 NC_009441.1 1892347 1892871 D hypothetical protein 1892347..1892871 Flavobacterium johnsoniae UW101 5090988 YP_001193989.1 CDS Fjoh_1638 NC_009441.1 1892880 1893425 D hypothetical protein 1892880..1893425 Flavobacterium johnsoniae UW101 5090989 YP_001193990.1 CDS Fjoh_1639 NC_009441.1 1893453 1894847 D hypothetical protein 1893453..1894847 Flavobacterium johnsoniae UW101 5090990 YP_001193991.1 CDS Fjoh_1640 NC_009441.1 1894867 1896057 D PFAM: cytochrome C oxidase subunit II, transmembrane region; cytochrome C oxidase subunit II, transmembrane region 1894867..1896057 Flavobacterium johnsoniae UW101 5090991 YP_001193992.1 CDS Fjoh_1641 NC_009441.1 1896088 1897890 D PFAM: cytochrome c oxidase, subunit I; cytochrome-c oxidase 1896088..1897890 Flavobacterium johnsoniae UW101 5090992 YP_001193993.1 CDS ruvB NC_009441.1 1897995 1899017 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1897995..1899017 Flavobacterium johnsoniae UW101 5090993 YP_001193994.1 CDS Fjoh_1643 NC_009441.1 1899024 1900370 D PFAM: cytochrome P450; cytochrome P450 1899024..1900370 Flavobacterium johnsoniae UW101 5090994 YP_001193995.1 CDS Fjoh_1644 NC_009441.1 1900367 1901293 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; hypothetical protein 1900367..1901293 Flavobacterium johnsoniae UW101 5091103 YP_001193996.1 CDS Fjoh_1645 NC_009441.1 1901824 1909287 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Hyalin; hypothetical protein 1901824..1909287 Flavobacterium johnsoniae UW101 5091104 YP_001193997.1 CDS Fjoh_1646 NC_009441.1 1909362 1910249 D hypothetical protein 1909362..1910249 Flavobacterium johnsoniae UW101 5091105 YP_001193998.1 CDS Fjoh_1647 NC_009441.1 1910260 1912260 D PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; OmpA/MotB domain-containing protein 1910260..1912260 Flavobacterium johnsoniae UW101 5091106 YP_001193999.1 CDS Fjoh_1648 NC_009441.1 1912813 1913154 R hypothetical protein complement(1912813..1913154) Flavobacterium johnsoniae UW101 5091107 YP_001194000.1 CDS Fjoh_1649 NC_009441.1 1913241 1913483 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1913241..1913483 Flavobacterium johnsoniae UW101 5091108 YP_001194001.1 CDS Fjoh_1650 NC_009441.1 1914140 1914565 D PFAM: CBS domain containing protein; signal-transduction protein 1914140..1914565 Flavobacterium johnsoniae UW101 5091109 YP_001194002.1 CDS Fjoh_1651 NC_009441.1 1914721 1917012 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 1914721..1917012 Flavobacterium johnsoniae UW101 5091110 YP_001194003.1 CDS ruvA NC_009441.1 1917094 1917675 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1917094..1917675 Flavobacterium johnsoniae UW101 5091111 YP_001194004.1 CDS Fjoh_1653 NC_009441.1 1917700 1924911 D hypothetical protein 1917700..1924911 Flavobacterium johnsoniae UW101 5091112 YP_001194005.1 CDS Fjoh_1654 NC_009441.1 1924996 1925376 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1924996..1925376 Flavobacterium johnsoniae UW101 5091113 YP_001194006.1 CDS Fjoh_1655 NC_009441.1 1925399 1925752 D hypothetical protein 1925399..1925752 Flavobacterium johnsoniae UW101 5091114 YP_001194007.1 CDS Fjoh_1656 NC_009441.1 1925831 1926610 D TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 1925831..1926610 Flavobacterium johnsoniae UW101 5091115 YP_001194008.1 CDS Fjoh_1657 NC_009441.1 1926630 1928738 D hypothetical protein 1926630..1928738 Flavobacterium johnsoniae UW101 5091116 YP_001194009.1 CDS Fjoh_1658 NC_009441.1 1928852 1929799 D TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 1928852..1929799 Flavobacterium johnsoniae UW101 5091117 YP_001194010.1 CDS Fjoh_1659 NC_009441.1 1929802 1930389 D PFAM: cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 1929802..1930389 Flavobacterium johnsoniae UW101 5091118 YP_001194011.1 CDS Fjoh_1660 NC_009441.1 1930432 1931418 D PFAM: cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 1930432..1931418 Flavobacterium johnsoniae UW101 5091119 YP_001194012.1 CDS Fjoh_1661 NC_009441.1 1931437 1931787 D hypothetical protein 1931437..1931787 Flavobacterium johnsoniae UW101 5091120 YP_001194013.1 CDS Fjoh_1662 NC_009441.1 1931866 1932522 D hypothetical protein 1931866..1932522 Flavobacterium johnsoniae UW101 5091121 YP_001194014.1 CDS Fjoh_1663 NC_009441.1 1932535 1933221 D PFAM: electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 1932535..1933221 Flavobacterium johnsoniae UW101 5091122 YP_001194015.1 CDS Fjoh_1664 NC_009441.1 1933224 1933766 D PFAM: protein of unknown function DUF420; hypothetical protein 1933224..1933766 Flavobacterium johnsoniae UW101 5091123 YP_001194016.1 CDS Fjoh_1665 NC_009441.1 1933756 1934028 D hypothetical protein 1933756..1934028 Flavobacterium johnsoniae UW101 5091124 YP_001194017.1 CDS Fjoh_1666 NC_009441.1 1934045 1935451 R hypothetical protein complement(1934045..1935451) Flavobacterium johnsoniae UW101 5091125 YP_001194018.1 CDS Fjoh_1667 NC_009441.1 1935630 1936331 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1935630..1936331 Flavobacterium johnsoniae UW101 5091126 YP_001194019.1 CDS Fjoh_1668 NC_009441.1 1936324 1937568 D PFAM: protein of unknown function DUF214; hypothetical protein 1936324..1937568 Flavobacterium johnsoniae UW101 5091127 YP_001194020.1 CDS Fjoh_1669 NC_009441.1 1937571 1938836 D PFAM: protein of unknown function DUF214; hypothetical protein 1937571..1938836 Flavobacterium johnsoniae UW101 5091128 YP_001194021.1 CDS Fjoh_1670 NC_009441.1 1938877 1939992 D TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1938877..1939992 Flavobacterium johnsoniae UW101 5091129 YP_001194022.1 CDS Fjoh_1671 NC_009441.1 1940071 1941456 D PFAM: outer membrane efflux protein; outer membrane efflux protein 1940071..1941456 Flavobacterium johnsoniae UW101 5091130 YP_001194023.1 CDS Fjoh_1672 NC_009441.1 1941463 1942752 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1941463..1942752 Flavobacterium johnsoniae UW101 5091131 YP_001194024.1 CDS Fjoh_1673 NC_009441.1 1942829 1943500 D PFAM: peptidase M22, glycoprotease; peptidase M22, glycoprotease 1942829..1943500 Flavobacterium johnsoniae UW101 5091132 YP_001194025.1 CDS Fjoh_1674 NC_009441.1 1943508 1944320 R PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; mechanosensitive ion channel MscS complement(1943508..1944320) Flavobacterium johnsoniae UW101 5091133 YP_001194026.1 CDS Fjoh_1675 NC_009441.1 1944407 1944682 R hypothetical protein complement(1944407..1944682) Flavobacterium johnsoniae UW101 5091134 YP_001194027.1 CDS Fjoh_1676 NC_009441.1 1945063 1945962 R PFAM: nitrogen-fixing NifU domain protein; NifU domain-containing protein complement(1945063..1945962) Flavobacterium johnsoniae UW101 5091135 YP_001194028.1 CDS Fjoh_1677 NC_009441.1 1946106 1947095 D hypothetical protein 1946106..1947095 Flavobacterium johnsoniae UW101 5091136 YP_001194029.1 CDS Fjoh_1678 NC_009441.1 1947105 1947623 D carbonic anhydrase 1947105..1947623 Flavobacterium johnsoniae UW101 5091137 YP_001194030.1 CDS Fjoh_1679 NC_009441.1 1947712 1948428 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(1947712..1948428) Flavobacterium johnsoniae UW101 5091138 YP_001194031.1 CDS Fjoh_1680 NC_009441.1 1948530 1949240 R PFAM: intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase complement(1948530..1949240) Flavobacterium johnsoniae UW101 5091139 YP_001194032.1 CDS Fjoh_1681 NC_009441.1 1949253 1950362 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(1949253..1950362) Flavobacterium johnsoniae UW101 5091140 YP_001194033.1 CDS Fjoh_1682 NC_009441.1 1950362 1950694 R hypothetical protein complement(1950362..1950694) Flavobacterium johnsoniae UW101 5091141 YP_001194034.1 CDS Fjoh_1683 NC_009441.1 1950684 1951691 R PFAM: Kelch repeat-containing protein; Kelch repeat protein; kelch repeat-containing protein complement(1950684..1951691) Flavobacterium johnsoniae UW101 5091142 YP_001194035.1 CDS Fjoh_1684 NC_009441.1 1951709 1952542 R hypothetical protein complement(1951709..1952542) Flavobacterium johnsoniae UW101 5091143 YP_001194036.1 CDS Fjoh_1685 NC_009441.1 1952773 1954101 D hypothetical protein 1952773..1954101 Flavobacterium johnsoniae UW101 5091144 YP_001194037.1 CDS Fjoh_1686 NC_009441.1 1954102 1955340 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 1954102..1955340 Flavobacterium johnsoniae UW101 5091145 YP_001194038.1 CDS Fjoh_1687 NC_009441.1 1955343 1956122 R TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; glutamate racemase complement(1955343..1956122) Flavobacterium johnsoniae UW101 5091146 YP_001194039.1 CDS Fjoh_1688 NC_009441.1 1956575 1957078 R PFAM: outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(1956575..1957078) Flavobacterium johnsoniae UW101 5091147 YP_001194040.1 CDS Fjoh_1689 NC_009441.1 1957093 1958118 R PFAM: outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(1957093..1958118) Flavobacterium johnsoniae UW101 5091148 YP_001194041.1 CDS Fjoh_1690 NC_009441.1 1958161 1960863 R PFAM: surface antigen (D15); surface antigen variable number repeat protein; surface antigen (D15) complement(1958161..1960863) Flavobacterium johnsoniae UW101 5091149 YP_001194042.1 CDS Fjoh_1691 NC_009441.1 1960871 1961611 R TIGRFAM: UDP diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; UDP diphosphate synthase complement(1960871..1961611) Flavobacterium johnsoniae UW101 5091150 YP_001194043.1 CDS Fjoh_1692 NC_009441.1 1961616 1962305 R hypothetical protein complement(1961616..1962305) Flavobacterium johnsoniae UW101 5091151 YP_001194044.1 CDS ppnK NC_009441.1 1962478 1963362 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(1962478..1963362) Flavobacterium johnsoniae UW101 5091152 YP_001194045.1 CDS Fjoh_1694 NC_009441.1 1963447 1964106 R PFAM: CBS domain containing protein; hypothetical protein complement(1963447..1964106) Flavobacterium johnsoniae UW101 5091153 YP_001194046.1 CDS Fjoh_1695 NC_009441.1 1964223 1964936 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1964223..1964936 Flavobacterium johnsoniae UW101 5091154 YP_001194047.1 CDS Fjoh_1696 NC_009441.1 1965015 1967285 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 1965015..1967285 Flavobacterium johnsoniae UW101 5091155 YP_001194048.1 CDS Fjoh_1697 NC_009441.1 1967289 1968143 D hypothetical protein 1967289..1968143 Flavobacterium johnsoniae UW101 5091156 YP_001194049.1 CDS Fjoh_1698 NC_009441.1 1968193 1969512 R hypothetical protein complement(1968193..1969512) Flavobacterium johnsoniae UW101 5091157 YP_001194050.1 CDS Fjoh_1699 NC_009441.1 1969720 1970484 D PFAM: alpha/beta hydrolase fold; PGAP1 family protein; alpha/beta hydrolase 1969720..1970484 Flavobacterium johnsoniae UW101 5093041 YP_001194051.1 CDS Fjoh_1700 NC_009441.1 1970577 1970921 D PFAM: membrane protein of unknown function; hypothetical protein 1970577..1970921 Flavobacterium johnsoniae UW101 5093042 YP_001194052.1 CDS Fjoh_1701 NC_009441.1 1971037 1972359 D PFAM: trigger factor, N-terminal domain; trigger factor domain-containing protein 1971037..1972359 Flavobacterium johnsoniae UW101 5093043 YP_001194053.1 CDS Fjoh_1702 NC_009441.1 1972641 1973315 D PFAM: peptidase S14, ClpP; endopeptidase Clp 1972641..1973315 Flavobacterium johnsoniae UW101 5093044 YP_001194054.1 CDS clpX NC_009441.1 1973499 1974731 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1973499..1974731 Flavobacterium johnsoniae UW101 5093045 YP_001194055.1 CDS Fjoh_1704 NC_009441.1 1974864 1975517 D hypothetical protein 1974864..1975517 Flavobacterium johnsoniae UW101 5093046 YP_001194056.1 CDS Fjoh_1705 NC_009441.1 1975571 1976533 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(1975571..1976533) Flavobacterium johnsoniae UW101 5093047 YP_001194057.1 CDS Fjoh_1706 NC_009441.1 1976677 1977087 D lactoylglutathione lyase-like protein 1976677..1977087 Flavobacterium johnsoniae UW101 5093048 YP_001194058.1 CDS Fjoh_1707 NC_009441.1 1977103 1977516 D PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 1977103..1977516 Flavobacterium johnsoniae UW101 5093049 YP_001194059.1 CDS Fjoh_1708 NC_009441.1 1977535 1977939 D PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 1977535..1977939 Flavobacterium johnsoniae UW101 5093050 YP_001194060.1 CDS Fjoh_1709 NC_009441.1 1978032 1978439 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1978032..1978439 Flavobacterium johnsoniae UW101 5093051 YP_001194061.1 CDS Fjoh_1710 NC_009441.1 1978442 1978885 D hypothetical protein 1978442..1978885 Flavobacterium johnsoniae UW101 5093052 YP_001194062.1 CDS Fjoh_1711 NC_009441.1 1978942 1979376 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1978942..1979376 Flavobacterium johnsoniae UW101 5093053 YP_001194063.1 CDS Fjoh_1712 NC_009441.1 1979534 1980766 D TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase, subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase, type 3; phosphoserine phosphatase SerB 1979534..1980766 Flavobacterium johnsoniae UW101 5093054 YP_001194064.1 CDS Fjoh_1713 NC_009441.1 1980952 1982475 R PFAM: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter complement(1980952..1982475) Flavobacterium johnsoniae UW101 5093055 YP_001194065.1 CDS Fjoh_1714 NC_009441.1 1982722 1983516 D hypothetical protein 1982722..1983516 Flavobacterium johnsoniae UW101 5093056 YP_001194066.1 CDS Fjoh_1715 NC_009441.1 1983805 1984842 D ADP-heptose--LPS heptosyltransferase-like protein 1983805..1984842 Flavobacterium johnsoniae UW101 5093057 YP_001194067.1 CDS Fjoh_1716 NC_009441.1 1984899 1987502 R PFAM: AsmA family protein; AsmA family protein complement(1984899..1987502) Flavobacterium johnsoniae UW101 5093058 YP_001194068.1 CDS Fjoh_1717 NC_009441.1 1987669 1988616 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1987669..1988616) Flavobacterium johnsoniae UW101 5093059 YP_001194069.1 CDS Fjoh_1718 NC_009441.1 1988628 1990385 R TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 67K type complement(1988628..1990385) Flavobacterium johnsoniae UW101 5093060 YP_001194070.1 CDS Fjoh_1719 NC_009441.1 1990524 1991657 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; deoxynucleoside kinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1990524..1991657 Flavobacterium johnsoniae UW101 5093061 YP_001194071.1 CDS Fjoh_1720 NC_009441.1 1991726 1993906 R PFAM: C-type lectin domain protein; C-type lectin domain-containing protein complement(1991726..1993906) Flavobacterium johnsoniae UW101 5093062 YP_001194072.1 CDS Fjoh_1721 NC_009441.1 1994020 1994556 R PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(1994020..1994556) Flavobacterium johnsoniae UW101 5093063 YP_001194073.1 CDS Fjoh_1722 NC_009441.1 1994631 1995068 R PFAM: protein of unknown function DUF1573; hypothetical protein complement(1994631..1995068) Flavobacterium johnsoniae UW101 5093064 YP_001194074.1 CDS Fjoh_1723 NC_009441.1 1995267 1997834 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1995267..1997834 Flavobacterium johnsoniae UW101 5093065 YP_001194075.1 CDS Fjoh_1724 NC_009441.1 1998316 1998696 D hypothetical protein 1998316..1998696 Flavobacterium johnsoniae UW101 5093543 YP_001194076.1 CDS Fjoh_1725 NC_009441.1 1998814 1999038 R hypothetical protein complement(1998814..1999038) Flavobacterium johnsoniae UW101 5093067 YP_001194077.1 CDS Fjoh_1726 NC_009441.1 1999388 2000617 R PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; 3-deoxy-D-manno-octulosonic-acid transferase complement(1999388..2000617) Flavobacterium johnsoniae UW101 5093068 YP_001194078.1 CDS Fjoh_1727 NC_009441.1 2000753 2001886 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase 2000753..2001886 Flavobacterium johnsoniae UW101 5093069 YP_001194079.1 CDS Fjoh_1728 NC_009441.1 2001921 2002937 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; UDP-glucose 4-epimerase 2001921..2002937 Flavobacterium johnsoniae UW101 5093070 YP_001194080.1 CDS Fjoh_1729 NC_009441.1 2003024 2003929 D PFAM: protein of unknown function DUF6, transmembrane; Protein of unknown function DUF250; hypothetical protein 2003024..2003929 Flavobacterium johnsoniae UW101 5093071 YP_001194081.1 CDS Fjoh_1730 NC_009441.1 2004152 2005024 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; malonyl CoA-acyl carrier protein transacylase complement(2004152..2005024) Flavobacterium johnsoniae UW101 5093072 YP_001194082.1 CDS Fjoh_1731 NC_009441.1 2005097 2005459 R hypothetical protein complement(2005097..2005459) Flavobacterium johnsoniae UW101 5093073 YP_001194083.1 CDS Fjoh_1732 NC_009441.1 2005556 2006416 D PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; AraC family transcriptional regulator 2005556..2006416 Flavobacterium johnsoniae UW101 5093074 YP_001194084.1 CDS Fjoh_1733 NC_009441.1 2006577 2007110 R PFAM: YceI family protein; hypothetical protein complement(2006577..2007110) Flavobacterium johnsoniae UW101 5093075 YP_001194085.1 CDS Fjoh_1734 NC_009441.1 2007409 2007639 R PFAM: protein of unknown function DUF1271; hypothetical protein complement(2007409..2007639) Flavobacterium johnsoniae UW101 5093076 YP_001194086.1 CDS Fjoh_1735 NC_009441.1 2007804 2008520 R PFAM: Pirin domain protein domain protein; pirin complement(2007804..2008520) Flavobacterium johnsoniae UW101 5093077 YP_001194087.1 CDS Fjoh_1736 NC_009441.1 2009018 2009377 R hypothetical protein complement(2009018..2009377) Flavobacterium johnsoniae UW101 5093078 YP_001194088.1 CDS Fjoh_1737 NC_009441.1 2009384 2010865 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; helix-turn-helix domain-containing protein complement(2009384..2010865) Flavobacterium johnsoniae UW101 5093079 YP_001194089.1 CDS Fjoh_1738 NC_009441.1 2011042 2012664 D Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 2011042..2012664 Flavobacterium johnsoniae UW101 5093080 YP_001194090.1 CDS Fjoh_1739 NC_009441.1 2012889 2014169 D TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; isocitrate lyase 2012889..2014169 Flavobacterium johnsoniae UW101 5093081 YP_001194091.1 CDS Fjoh_1740 NC_009441.1 2014274 2014849 R PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(2014274..2014849) Flavobacterium johnsoniae UW101 5093082 YP_001194092.1 CDS Fjoh_1741 NC_009441.1 2014849 2015169 R hypothetical protein complement(2014849..2015169) Flavobacterium johnsoniae UW101 5093083 YP_001194093.1 CDS purT NC_009441.1 2015176 2016333 R non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 complement(2015176..2016333) Flavobacterium johnsoniae UW101 5093084 YP_001194094.1 CDS Fjoh_1743 NC_009441.1 2016927 2017712 D hypothetical protein 2016927..2017712 Flavobacterium johnsoniae UW101 5093085 YP_001194095.1 CDS Fjoh_1744 NC_009441.1 2017753 2019621 R PFAM: peptidase U32; peptidase U32 complement(2017753..2019621) Flavobacterium johnsoniae UW101 5093086 YP_001194096.1 CDS Fjoh_1745 NC_009441.1 2019767 2020363 R hypothetical protein complement(2019767..2020363) Flavobacterium johnsoniae UW101 5093087 YP_001194097.1 CDS Fjoh_1746 NC_009441.1 2020489 2020944 R hypothetical protein complement(2020489..2020944) Flavobacterium johnsoniae UW101 5093088 YP_001194098.1 CDS Fjoh_1747 NC_009441.1 2021305 2022495 R PFAM: aminotransferase, class I and II; class I and II aminotransferase complement(2021305..2022495) Flavobacterium johnsoniae UW101 5093089 YP_001194099.1 CDS Fjoh_1748 NC_009441.1 2022569 2023666 R PFAM: fatty acid desaturase; linoleoyl-CoA desaturase complement(2022569..2023666) Flavobacterium johnsoniae UW101 5093090 YP_001194100.1 CDS gidB NC_009441.1 2023774 2024403 D glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 2023774..2024403 Flavobacterium johnsoniae UW101 5093091 YP_001194101.1 CDS Fjoh_1750 NC_009441.1 2024511 2024807 R hypothetical protein complement(2024511..2024807) Flavobacterium johnsoniae UW101 5093092 YP_001194102.1 CDS Fjoh_1751 NC_009441.1 2024845 2025330 R hypothetical protein complement(2024845..2025330) Flavobacterium johnsoniae UW101 5093093 YP_001194103.1 CDS Fjoh_1752 NC_009441.1 2025333 2026064 R hypothetical protein complement(2025333..2026064) Flavobacterium johnsoniae UW101 5093094 YP_001194104.1 CDS Fjoh_1753 NC_009441.1 2026317 2027942 R TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase complement(2026317..2027942) Flavobacterium johnsoniae UW101 5093095 YP_001194105.1 CDS Fjoh_1754 NC_009441.1 2028134 2029189 D RNA procession exonuclease-like protein 2028134..2029189 Flavobacterium johnsoniae UW101 5091821 YP_001194106.1 CDS Fjoh_1755 NC_009441.1 2029372 2030973 D PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; ATP dependent DNA ligase 2029372..2030973 Flavobacterium johnsoniae UW101 5091822 YP_001194107.1 CDS Fjoh_1756 NC_009441.1 2031140 2033599 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 2031140..2033599 Flavobacterium johnsoniae UW101 5091823 YP_001194108.1 CDS Fjoh_1757 NC_009441.1 2033606 2034238 D PFAM: metallophosphoesterase; metallophosphoesterase 2033606..2034238 Flavobacterium johnsoniae UW101 5091824 YP_001194109.1 CDS apaG NC_009441.1 2034240 2034626 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(2034240..2034626) Flavobacterium johnsoniae UW101 5091825 YP_001194110.1 CDS Fjoh_1759 NC_009441.1 2034704 2035963 R hypothetical protein complement(2034704..2035963) Flavobacterium johnsoniae UW101 5091826 YP_001194111.1 CDS Fjoh_1760 NC_009441.1 2036042 2038942 R PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; non-specific serine/threonine protein kinase complement(2036042..2038942) Flavobacterium johnsoniae UW101 5091827 YP_001194112.1 CDS Fjoh_1761 NC_009441.1 2039064 2039837 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(2039064..2039837) Flavobacterium johnsoniae UW101 5091828 YP_001194113.1 CDS Fjoh_1762 NC_009441.1 2039859 2040677 R TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase complement(2039859..2040677) Flavobacterium johnsoniae UW101 5091829 YP_001194114.1 CDS Fjoh_1763 NC_009441.1 2040878 2042131 D PFAM: protein of unknown function DUF445; hypothetical protein 2040878..2042131 Flavobacterium johnsoniae UW101 5091830 YP_001194115.1 CDS Fjoh_1764 NC_009441.1 2042296 2043813 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(2042296..2043813) Flavobacterium johnsoniae UW101 5091831 YP_001194116.1 CDS Fjoh_1765 NC_009441.1 2043955 2046381 R hypothetical protein complement(2043955..2046381) Flavobacterium johnsoniae UW101 5091832 YP_001194117.1 CDS Fjoh_1766 NC_009441.1 2046684 2047409 D hypothetical protein 2046684..2047409 Flavobacterium johnsoniae UW101 5091833 YP_001194118.1 CDS Fjoh_1767 NC_009441.1 2047398 2048978 R PFAM: Peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein complement(2047398..2048978) Flavobacterium johnsoniae UW101 5091834 YP_001194119.1 CDS Fjoh_1768 NC_009441.1 2049750 2050457 R alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E complement(2049750..2050457) Flavobacterium johnsoniae UW101 5093545 YP_001194120.1 CDS Fjoh_1769 NC_009441.1 2050624 2051391 D hypothetical protein 2050624..2051391 Flavobacterium johnsoniae UW101 5091836 YP_001194121.1 CDS Fjoh_1770 NC_009441.1 2051378 2052106 D hypothetical protein 2051378..2052106 Flavobacterium johnsoniae UW101 5091837 YP_001194122.1 CDS Fjoh_1771 NC_009441.1 2052096 2052845 D hypothetical protein 2052096..2052845 Flavobacterium johnsoniae UW101 5091838 YP_001194123.1 CDS Fjoh_1772 NC_009441.1 2052845 2053351 D hypothetical protein 2052845..2053351 Flavobacterium johnsoniae UW101 5091839 YP_001194124.1 CDS Fjoh_1773 NC_009441.1 2053418 2055655 D aminopeptidase N-like protein 2053418..2055655 Flavobacterium johnsoniae UW101 5091840 YP_001194125.1 CDS Fjoh_1774 NC_009441.1 2055760 2056107 D PFAM: sec-independent translocation protein mttA/Hcf106; sec-independent translocation protein mttA/Hcf106 2055760..2056107 Flavobacterium johnsoniae UW101 5091841 YP_001194126.1 CDS Fjoh_1775 NC_009441.1 2056109 2056672 D PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 2056109..2056672 Flavobacterium johnsoniae UW101 5091842 YP_001194127.1 CDS Fjoh_1776 NC_009441.1 2056875 2057516 R PFAM: O-methyltransferase, family 3; O-methyltransferase complement(2056875..2057516) Flavobacterium johnsoniae UW101 5091843 YP_001194128.1 CDS Fjoh_1777 NC_009441.1 2057631 2058029 R hypothetical protein complement(2057631..2058029) Flavobacterium johnsoniae UW101 5091844 YP_001194129.1 CDS Fjoh_1778 NC_009441.1 2058233 2058784 R hypothetical protein complement(2058233..2058784) Flavobacterium johnsoniae UW101 5091845 YP_001194130.1 CDS Fjoh_1779 NC_009441.1 2058796 2060247 R hypothetical protein complement(2058796..2060247) Flavobacterium johnsoniae UW101 5091846 YP_001194131.1 CDS Fjoh_1780 NC_009441.1 2060253 2060831 R hypothetical protein complement(2060253..2060831) Flavobacterium johnsoniae UW101 5091847 YP_001194132.1 CDS Fjoh_1781 NC_009441.1 2061104 2061667 R hypothetical protein complement(2061104..2061667) Flavobacterium johnsoniae UW101 5091848 YP_001194133.1 CDS Fjoh_1782 NC_009441.1 2062092 2063141 D TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; radical SAM protein 2062092..2063141 Flavobacterium johnsoniae UW101 5091849 YP_001194134.1 CDS Fjoh_1783 NC_009441.1 2063300 2064160 R hypothetical protein complement(2063300..2064160) Flavobacterium johnsoniae UW101 5091850 YP_001194135.1 CDS Fjoh_1784 NC_009441.1 2064322 2065299 D PFAM: Polyprenyl synthetase; polyprenyl synthetase 2064322..2065299 Flavobacterium johnsoniae UW101 5091851 YP_001194136.1 CDS Fjoh_1785 NC_009441.1 2065323 2066012 R hypothetical protein complement(2065323..2066012) Flavobacterium johnsoniae UW101 5091852 YP_001194137.1 CDS Fjoh_1786 NC_009441.1 2066168 2066893 R hypothetical protein complement(2066168..2066893) Flavobacterium johnsoniae UW101 5091853 YP_001194138.1 CDS Fjoh_1787 NC_009441.1 2067070 2067630 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 2067070..2067630 Flavobacterium johnsoniae UW101 5091854 YP_001194139.1 CDS Fjoh_1788 NC_009441.1 2067617 2068348 D hypothetical protein 2067617..2068348 Flavobacterium johnsoniae UW101 5091855 YP_001194140.1 CDS Fjoh_1789 NC_009441.1 2068421 2069449 D hypothetical protein 2068421..2069449 Flavobacterium johnsoniae UW101 5091856 YP_001194141.1 CDS Fjoh_1790 NC_009441.1 2069522 2071636 D TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; DNA primase 2069522..2071636 Flavobacterium johnsoniae UW101 5091857 YP_001194142.1 CDS Fjoh_1791 NC_009441.1 2071723 2072352 R PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator complement(2071723..2072352) Flavobacterium johnsoniae UW101 5091858 YP_001194143.1 CDS Fjoh_1792 NC_009441.1 2072445 2073251 R TIGRFAM: NAD+ synthetase; PFAM: NAD+ synthase; NAD+ synthetase complement(2072445..2073251) Flavobacterium johnsoniae UW101 5091859 YP_001194144.1 CDS Fjoh_1793 NC_009441.1 2073362 2074318 D hypothetical protein 2073362..2074318 Flavobacterium johnsoniae UW101 5091860 YP_001194145.1 CDS Fjoh_1794 NC_009441.1 2074318 2074653 D hypothetical protein 2074318..2074653 Flavobacterium johnsoniae UW101 5091861 YP_001194146.1 CDS Fjoh_1795 NC_009441.1 2075014 2075406 D hypothetical protein 2075014..2075406 Flavobacterium johnsoniae UW101 5091862 YP_001194147.1 CDS Fjoh_1796 NC_009441.1 2075428 2077287 D PFAM: Rhs element Vgr protein; Rhs element Vgr protein 2075428..2077287 Flavobacterium johnsoniae UW101 5091863 YP_001194148.1 CDS Fjoh_1797 NC_009441.1 2077348 2078580 D hypothetical protein 2077348..2078580 Flavobacterium johnsoniae UW101 5091864 YP_001194149.1 CDS Fjoh_1798 NC_009441.1 2079416 2080207 D hypothetical protein 2079416..2080207 Flavobacterium johnsoniae UW101 5091865 YP_001194150.1 CDS Fjoh_1799 NC_009441.1 2080525 2081163 R hypothetical protein complement(2080525..2081163) Flavobacterium johnsoniae UW101 5091866 YP_001194151.1 CDS engB NC_009441.1 2081299 2081931 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(2081299..2081931) Flavobacterium johnsoniae UW101 5091867 YP_001194152.1 CDS Fjoh_1801 NC_009441.1 2081974 2082738 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(2081974..2082738) Flavobacterium johnsoniae UW101 5091868 YP_001194153.1 CDS Fjoh_1802 NC_009441.1 2083171 2083590 D PFAM: protein of unknown function UPF0040; hypothetical protein 2083171..2083590 Flavobacterium johnsoniae UW101 5091869 YP_001194154.1 CDS mraW NC_009441.1 2083565 2084473 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 2083565..2084473 Flavobacterium johnsoniae UW101 5091870 YP_001194155.1 CDS Fjoh_1804 NC_009441.1 2084494 2084841 D hypothetical protein 2084494..2084841 Flavobacterium johnsoniae UW101 5091871 YP_001194156.1 CDS Fjoh_1805 NC_009441.1 2084832 2086841 D PFAM: penicillin-binding protein, transpeptidase; PASTA domain containing protein; peptidoglycan glycosyltransferase 2084832..2086841 Flavobacterium johnsoniae UW101 5091872 YP_001194157.1 CDS murE NC_009441.1 2086838 2088301 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2086838..2088301 Flavobacterium johnsoniae UW101 5091873 YP_001194158.1 CDS mraY NC_009441.1 2088380 2089612 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2088380..2089612 Flavobacterium johnsoniae UW101 5091874 YP_001194159.1 CDS Fjoh_1808 NC_009441.1 2089613 2090944 D TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase 2089613..2090944 Flavobacterium johnsoniae UW101 5091875 YP_001194160.1 CDS Fjoh_1809 NC_009441.1 2091034 2092353 D PFAM: cell cycle protein; cell cycle protein 2091034..2092353 Flavobacterium johnsoniae UW101 5091434 YP_001194161.1 CDS murG NC_009441.1 2092370 2093455 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 2092370..2093455 Flavobacterium johnsoniae UW101 5091435 YP_001194162.1 CDS murC NC_009441.1 2093613 2094962 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2093613..2094962 Flavobacterium johnsoniae UW101 5091436 YP_001194163.1 CDS Fjoh_1812 NC_009441.1 2094949 2095671 D hypothetical protein 2094949..2095671 Flavobacterium johnsoniae UW101 5091437 YP_001194164.1 CDS Fjoh_1813 NC_009441.1 2095678 2097090 D PFAM: cell division protein FtsA; cell division protein FtsA 2095678..2097090 Flavobacterium johnsoniae UW101 5091438 YP_001194165.1 CDS Fjoh_1814 NC_009441.1 2097170 2099152 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; cell division protein FtsZ 2097170..2099152 Flavobacterium johnsoniae UW101 5091439 YP_001194166.1 CDS Fjoh_1815 NC_009441.1 2099443 2099892 D PFAM: GatB/Yqey domain protein; GatB/Yqey domain-containing protein 2099443..2099892 Flavobacterium johnsoniae UW101 5091440 YP_001194167.1 CDS Fjoh_1816 NC_009441.1 2100231 2100845 D hypothetical protein 2100231..2100845 Flavobacterium johnsoniae UW101 5093546 YP_001194168.1 CDS Fjoh_1817 NC_009441.1 2100956 2102158 R SMART: Pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone complement(2100956..2102158) Flavobacterium johnsoniae UW101 5091442 YP_001194169.1 CDS Fjoh_1818 NC_009441.1 2102422 2103024 R PFAM: bifunctional deaminase-reductase domain protein; deaminase-reductase domain-containing protein complement(2102422..2103024) Flavobacterium johnsoniae UW101 5091443 YP_001194170.1 CDS Fjoh_1819 NC_009441.1 2103088 2103450 R hypothetical protein complement(2103088..2103450) Flavobacterium johnsoniae UW101 5091444 YP_001194171.1 CDS Fjoh_1820 NC_009441.1 2103585 2104373 D hypothetical protein 2103585..2104373 Flavobacterium johnsoniae UW101 5091445 YP_001194172.1 CDS Fjoh_1821 NC_009441.1 2104433 2105308 R TIGRFAM: methyltransferase; PFAM: O-methyltransferase domain protein; methyltransferase complement(2104433..2105308) Flavobacterium johnsoniae UW101 5091446 YP_001194173.1 CDS Fjoh_1822 NC_009441.1 2105308 2105772 R PFAM: protein of unknown function DUF962; hypothetical protein complement(2105308..2105772) Flavobacterium johnsoniae UW101 5091447 YP_001194174.1 CDS Fjoh_1823 NC_009441.1 2105821 2106291 R hypothetical protein complement(2105821..2106291) Flavobacterium johnsoniae UW101 5091448 YP_001194175.1 CDS Fjoh_1824 NC_009441.1 2106455 2107156 R hypothetical protein complement(2106455..2107156) Flavobacterium johnsoniae UW101 5091449 YP_001194176.1 CDS Fjoh_1825 NC_009441.1 2107320 2108549 R hypothetical protein complement(2107320..2108549) Flavobacterium johnsoniae UW101 5091450 YP_001194177.1 CDS Fjoh_1826 NC_009441.1 2108848 2109075 R hypothetical protein complement(2108848..2109075) Flavobacterium johnsoniae UW101 5091451 YP_001194178.1 CDS Fjoh_1827 NC_009441.1 2109168 2109860 D hypothetical protein 2109168..2109860 Flavobacterium johnsoniae UW101 5091452 YP_001194179.1 CDS Fjoh_1828 NC_009441.1 2110092 2110556 R hypothetical protein complement(2110092..2110556) Flavobacterium johnsoniae UW101 5091453 YP_001194180.1 CDS Fjoh_1829 NC_009441.1 2110910 2111266 D hypothetical protein 2110910..2111266 Flavobacterium johnsoniae UW101 5091454 YP_001194181.1 CDS Fjoh_1830 NC_009441.1 2111502 2111783 D hypothetical protein 2111502..2111783 Flavobacterium johnsoniae UW101 5091455 YP_001194182.1 CDS Fjoh_1831 NC_009441.1 2111936 2112322 R hypothetical protein complement(2111936..2112322) Flavobacterium johnsoniae UW101 5091456 YP_001194183.1 CDS Fjoh_1832 NC_009441.1 2112441 2113769 R hypothetical protein complement(2112441..2113769) Flavobacterium johnsoniae UW101 5091457 YP_001194184.1 CDS Fjoh_1833 NC_009441.1 2113756 2114277 R hypothetical protein complement(2113756..2114277) Flavobacterium johnsoniae UW101 5091458 YP_001194185.1 CDS Fjoh_1834 NC_009441.1 2114523 2115236 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(2114523..2115236) Flavobacterium johnsoniae UW101 5091459 YP_001194186.1 CDS Fjoh_1835 NC_009441.1 2115209 2116207 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(2115209..2116207) Flavobacterium johnsoniae UW101 5091460 YP_001194187.1 CDS Fjoh_1836 NC_009441.1 2116389 2117378 D hypothetical protein 2116389..2117378 Flavobacterium johnsoniae UW101 5091461 YP_001194188.1 CDS Fjoh_1837 NC_009441.1 2117410 2117622 D hypothetical protein 2117410..2117622 Flavobacterium johnsoniae UW101 5091462 YP_001194189.1 CDS Fjoh_1838 NC_009441.1 2117858 2119387 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; sulfate transporter 2117858..2119387 Flavobacterium johnsoniae UW101 5091463 YP_001194190.1 CDS Fjoh_1839 NC_009441.1 2119633 2120541 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 2119633..2120541 Flavobacterium johnsoniae UW101 5091464 YP_001194191.1 CDS Fjoh_1840 NC_009441.1 2120633 2121472 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2120633..2121472 Flavobacterium johnsoniae UW101 5091465 YP_001194192.1 CDS Fjoh_1841 NC_009441.1 2121650 2122852 R PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; phosphodiesterase I complement(2121650..2122852) Flavobacterium johnsoniae UW101 5091466 YP_001194193.1 CDS groEL NC_009441.1 2123244 2124875 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(2123244..2124875) Flavobacterium johnsoniae UW101 5091467 YP_001194194.1 CDS Fjoh_1843 NC_009441.1 2124966 2125316 R PFAM: S23 ribosomal protein; S23 ribosomal protein complement(2124966..2125316) Flavobacterium johnsoniae UW101 5091468 YP_001194195.1 CDS groES NC_009441.1 2125402 2125677 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(2125402..2125677) Flavobacterium johnsoniae UW101 5091469 YP_001194196.1 CDS Fjoh_1845 NC_009441.1 2125818 2126156 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG complement(2125818..2126156) Flavobacterium johnsoniae UW101 5091470 YP_001194197.1 CDS Fjoh_1846 NC_009441.1 2126161 2127846 R hypothetical protein complement(2126161..2127846) Flavobacterium johnsoniae UW101 5091471 YP_001194198.1 CDS Fjoh_1847 NC_009441.1 2127968 2128486 R hypothetical protein complement(2127968..2128486) Flavobacterium johnsoniae UW101 5091472 YP_001194199.1 CDS Fjoh_1848 NC_009441.1 2128584 2129843 R PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator complement(2128584..2129843) Flavobacterium johnsoniae UW101 5091473 YP_001194200.1 CDS Fjoh_1849 NC_009441.1 2129900 2130271 R hypothetical protein complement(2129900..2130271) Flavobacterium johnsoniae UW101 5091474 YP_001194201.1 CDS Fjoh_1850 NC_009441.1 2130351 2131796 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(2130351..2131796) Flavobacterium johnsoniae UW101 5091475 YP_001194202.1 CDS Fjoh_1851 NC_009441.1 2132134 2134653 D TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; DNA topoisomerase I 2132134..2134653 Flavobacterium johnsoniae UW101 5091476 YP_001194203.1 CDS Fjoh_1852 NC_009441.1 2134657 2135808 D hypothetical protein 2134657..2135808 Flavobacterium johnsoniae UW101 5091477 YP_001194204.1 CDS Fjoh_1853 NC_009441.1 2136072 2137466 D PFAM: protein of unknown function DUF323; hypothetical protein 2136072..2137466 Flavobacterium johnsoniae UW101 5091478 YP_001194205.1 CDS Fjoh_1854 NC_009441.1 2137548 2138195 D hypothetical protein 2137548..2138195 Flavobacterium johnsoniae UW101 5091479 YP_001194206.1 CDS Fjoh_1855 NC_009441.1 2138247 2139788 D hypothetical protein 2138247..2139788 Flavobacterium johnsoniae UW101 5091480 YP_001194207.1 CDS Fjoh_1856 NC_009441.1 2139833 2140822 D hypothetical protein 2139833..2140822 Flavobacterium johnsoniae UW101 5091481 YP_001194208.2 CDS Fjoh_1857 NC_009441.1 2141023 2142012 D protein GldO 2141023..2142012 Flavobacterium johnsoniae UW101 5091482 YP_001194209.1 CDS Fjoh_1858 NC_009441.1 2142090 2143163 D PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase 2142090..2143163 Flavobacterium johnsoniae UW101 5091483 YP_001194210.1 CDS Fjoh_1859 NC_009441.1 2143144 2143527 R hypothetical protein complement(2143144..2143527) Flavobacterium johnsoniae UW101 5091484 YP_001194211.1 CDS Fjoh_1860 NC_009441.1 2143594 2145507 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2143594..2145507 Flavobacterium johnsoniae UW101 5091485 YP_001194212.1 CDS Fjoh_1861 NC_009441.1 2145652 2146614 R hypothetical protein complement(2145652..2146614) Flavobacterium johnsoniae UW101 5091486 YP_001194213.1 CDS Fjoh_1862 NC_009441.1 2146680 2147549 D PFAM: diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 2146680..2147549 Flavobacterium johnsoniae UW101 5091487 YP_001194214.1 CDS Fjoh_1863 NC_009441.1 2147565 2148710 R hypothetical protein complement(2147565..2148710) Flavobacterium johnsoniae UW101 5091488 YP_001194215.1 CDS Fjoh_1864 NC_009441.1 2148829 2149317 R hypothetical protein complement(2148829..2149317) Flavobacterium johnsoniae UW101 5090391 YP_001194216.1 CDS Fjoh_1865 NC_009441.1 2149502 2150215 D PFAM: leucine-rich repeat protein; leucine-rich repeat-containing protein 2149502..2150215 Flavobacterium johnsoniae UW101 5090392 YP_001194217.1 CDS Fjoh_1866 NC_009441.1 2150459 2150764 D hypothetical protein 2150459..2150764 Flavobacterium johnsoniae UW101 5090393 YP_001194218.1 CDS Fjoh_1867 NC_009441.1 2150921 2151229 D hypothetical protein 2150921..2151229 Flavobacterium johnsoniae UW101 5090394 YP_001194219.1 CDS Fjoh_1868 NC_009441.1 2151299 2152393 R exopolyphosphatase-like protein complement(2151299..2152393) Flavobacterium johnsoniae UW101 5090395 YP_001194220.1 CDS Fjoh_1869 NC_009441.1 2152742 2153266 R hypothetical protein complement(2152742..2153266) Flavobacterium johnsoniae UW101 5093547 YP_001194221.1 CDS Fjoh_1870 NC_009441.1 2153311 2153604 R hypothetical protein complement(2153311..2153604) Flavobacterium johnsoniae UW101 5090397 YP_001194222.1 CDS Fjoh_1871 NC_009441.1 2153612 2155123 R PFAM: glycosyl transferase, family 39; glycosyl transferase family protein complement(2153612..2155123) Flavobacterium johnsoniae UW101 5090398 YP_001194223.1 CDS Fjoh_1872 NC_009441.1 2155264 2155812 R hypothetical protein complement(2155264..2155812) Flavobacterium johnsoniae UW101 5090399 YP_001194224.1 CDS Fjoh_1873 NC_009441.1 2155999 2157558 R PFAM: PKD domain containing protein; PKD domain-containing protein complement(2155999..2157558) Flavobacterium johnsoniae UW101 5090400 YP_001194225.1 CDS Fjoh_1874 NC_009441.1 2157575 2158732 R hypothetical protein complement(2157575..2158732) Flavobacterium johnsoniae UW101 5090401 YP_001194226.1 CDS Fjoh_1875 NC_009441.1 2158766 2160811 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(2158766..2160811) Flavobacterium johnsoniae UW101 5090402 YP_001194227.1 CDS Fjoh_1876 NC_009441.1 2161657 2162070 R hypothetical protein complement(2161657..2162070) Flavobacterium johnsoniae UW101 5093548 YP_001194228.1 CDS Fjoh_1877 NC_009441.1 2162536 2163324 D hypothetical protein 2162536..2163324 Flavobacterium johnsoniae UW101 5090404 YP_001194229.1 CDS era NC_009441.1 2163558 2164445 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2163558..2164445 Flavobacterium johnsoniae UW101 5093549 YP_001194230.1 CDS engA NC_009441.1 2164771 2166084 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2164771..2166084 Flavobacterium johnsoniae UW101 5090406 YP_001194231.1 CDS Fjoh_1880 NC_009441.1 2166234 2168996 D hypothetical protein 2166234..2168996 Flavobacterium johnsoniae UW101 5090407 YP_001194232.1 CDS Fjoh_1881 NC_009441.1 2169143 2169880 R hypothetical protein complement(2169143..2169880) Flavobacterium johnsoniae UW101 5090408 YP_001194233.1 CDS Fjoh_1882 NC_009441.1 2170031 2170579 R PFAM: LemA family protein; LemA family protein complement(2170031..2170579) Flavobacterium johnsoniae UW101 5090409 YP_001194234.1 CDS Fjoh_1883 NC_009441.1 2170593 2172164 R hypothetical protein complement(2170593..2172164) Flavobacterium johnsoniae UW101 5090410 YP_001194235.1 CDS Fjoh_1884 NC_009441.1 2172288 2173208 R hypothetical protein complement(2172288..2173208) Flavobacterium johnsoniae UW101 5090411 YP_001194236.1 CDS Fjoh_1885 NC_009441.1 2173235 2174005 R hypothetical protein complement(2173235..2174005) Flavobacterium johnsoniae UW101 5090412 YP_001194237.1 CDS Fjoh_1886 NC_009441.1 2174135 2175031 R hypothetical protein complement(2174135..2175031) Flavobacterium johnsoniae UW101 5090413 YP_001194238.1 CDS Fjoh_1887 NC_009441.1 2175602 2178148 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(2175602..2178148) Flavobacterium johnsoniae UW101 5090414 YP_001194239.1 CDS Fjoh_1888 NC_009441.1 2178398 2178811 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator complement(2178398..2178811) Flavobacterium johnsoniae UW101 5090415 YP_001194240.1 CDS Fjoh_1889 NC_009441.1 2178894 2179712 R PFAM: protein of unknown function DUF477; hypothetical protein complement(2178894..2179712) Flavobacterium johnsoniae UW101 5090416 YP_001194241.1 CDS Fjoh_1890 NC_009441.1 2179716 2180153 R PFAM: protein of unknown function DUF477; hypothetical protein complement(2179716..2180153) Flavobacterium johnsoniae UW101 5090417 YP_001194242.1 CDS Fjoh_1891 NC_009441.1 2180240 2180824 R PFAM: LemA family protein; LemA family protein complement(2180240..2180824) Flavobacterium johnsoniae UW101 5090418 YP_001194243.1 CDS Fjoh_1892 NC_009441.1 2180858 2181190 R PFAM: regulatory protein, MerR; MerR family transcriptional regulator complement(2180858..2181190) Flavobacterium johnsoniae UW101 5090419 YP_001194244.1 CDS Fjoh_1893 NC_009441.1 2181237 2182214 R PFAM: peptidase M23B; peptidase M23B complement(2181237..2182214) Flavobacterium johnsoniae UW101 5090420 YP_001194245.1 CDS alaS NC_009441.1 2182497 2185136 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2182497..2185136 Flavobacterium johnsoniae UW101 5090421 YP_001194246.1 CDS Fjoh_1895 NC_009441.1 2185423 2187168 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2185423..2187168) Flavobacterium johnsoniae UW101 5090422 YP_001194247.1 CDS Fjoh_1896 NC_009441.1 2187446 2188249 D hypothetical protein 2187446..2188249 Flavobacterium johnsoniae UW101 5090423 YP_001194248.1 CDS Fjoh_1897 NC_009441.1 2188348 2189307 D hypothetical protein 2188348..2189307 Flavobacterium johnsoniae UW101 5090424 YP_001194249.1 CDS Fjoh_1898 NC_009441.1 2189424 2190656 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2189424..2190656 Flavobacterium johnsoniae UW101 5090425 YP_001194250.1 CDS Fjoh_1899 NC_009441.1 2190954 2196053 D hypothetical protein 2190954..2196053 Flavobacterium johnsoniae UW101 5090426 YP_001194251.1 CDS Fjoh_1900 NC_009441.1 2196037 2198355 D PFAM: surface antigen (D15); surface antigen (D15) 2196037..2198355 Flavobacterium johnsoniae UW101 5090427 YP_001194252.1 CDS Fjoh_1901 NC_009441.1 2198556 2199185 D hypothetical protein 2198556..2199185 Flavobacterium johnsoniae UW101 5090428 YP_001194253.1 CDS phhA NC_009441.1 2199355 2201112 R phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase complement(2199355..2201112) Flavobacterium johnsoniae UW101 5090429 YP_001194254.1 CDS Fjoh_1903 NC_009441.1 2201252 2201695 R hypothetical protein complement(2201252..2201695) Flavobacterium johnsoniae UW101 5090430 YP_001194255.1 CDS Fjoh_1904 NC_009441.1 2201772 2202251 R hypothetical protein complement(2201772..2202251) Flavobacterium johnsoniae UW101 5090431 YP_001194256.2 CDS Fjoh_1905 NC_009441.1 2202568 2204715 D PFAM: Ricin B lectin; glycoside hydrolase, family 30; beta-glucosidase 2202568..2204715 Flavobacterium johnsoniae UW101 5090432 YP_001194257.1 CDS Fjoh_1906 NC_009441.1 2204802 2206046 R catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase complement(2204802..2206046) Flavobacterium johnsoniae UW101 5090433 YP_001194258.1 CDS Fjoh_1907 NC_009441.1 2206388 2206924 R hypothetical protein complement(2206388..2206924) Flavobacterium johnsoniae UW101 5090434 YP_001194259.1 CDS Fjoh_1908 NC_009441.1 2206955 2208931 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(2206955..2208931) Flavobacterium johnsoniae UW101 5090435 YP_001194260.1 CDS Fjoh_1909 NC_009441.1 2209515 2210492 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase complement(2209515..2210492) Flavobacterium johnsoniae UW101 5090436 YP_001194261.1 CDS Fjoh_1910 NC_009441.1 2210509 2210691 R hypothetical protein complement(2210509..2210691) Flavobacterium johnsoniae UW101 5090437 YP_001194262.1 CDS Fjoh_1911 NC_009441.1 2210807 2211148 D hypothetical protein 2210807..2211148 Flavobacterium johnsoniae UW101 5090438 YP_001194263.1 CDS Fjoh_1912 NC_009441.1 2211221 2212129 D 1-aminocyclopropane-1-carboxylate deaminase 2211221..2212129 Flavobacterium johnsoniae UW101 5090439 YP_001194264.1 CDS Fjoh_1913 NC_009441.1 2212122 2213018 D PFAM: Peptidoglycan-binding LysM; Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 2212122..2213018 Flavobacterium johnsoniae UW101 5090440 YP_001194265.1 CDS Fjoh_1914 NC_009441.1 2213071 2214357 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2213071..2214357 Flavobacterium johnsoniae UW101 5090441 YP_001194266.1 CDS Fjoh_1915 NC_009441.1 2214398 2215135 R hypothetical protein complement(2214398..2215135) Flavobacterium johnsoniae UW101 5090442 YP_001194267.1 CDS Fjoh_1916 NC_009441.1 2215301 2215741 R hypothetical protein complement(2215301..2215741) Flavobacterium johnsoniae UW101 5090443 YP_001194268.1 CDS Fjoh_1917 NC_009441.1 2215912 2216913 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 2215912..2216913 Flavobacterium johnsoniae UW101 5090444 YP_001194269.1 CDS Fjoh_1918 NC_009441.1 2216987 2217583 D hypothetical protein 2216987..2217583 Flavobacterium johnsoniae UW101 5090445 YP_001194270.1 CDS lysS NC_009441.1 2217648 2219351 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(2217648..2219351) Flavobacterium johnsoniae UW101 5090446 YP_001194271.1 CDS Fjoh_1920 NC_009441.1 2219649 2220374 D hypothetical protein 2219649..2220374 Flavobacterium johnsoniae UW101 5091656 YP_001194272.1 CDS Fjoh_1921 NC_009441.1 2220501 2221253 D hypothetical protein 2220501..2221253 Flavobacterium johnsoniae UW101 5091657 YP_001194273.1 CDS Fjoh_1922 NC_009441.1 2221259 2221957 D TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 2221259..2221957 Flavobacterium johnsoniae UW101 5091658 YP_001194274.1 CDS rnhB NC_009441.1 2221993 2222658 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2221993..2222658) Flavobacterium johnsoniae UW101 5091659 YP_001194275.1 CDS Fjoh_1924 NC_009441.1 2222995 2226102 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 2222995..2226102 Flavobacterium johnsoniae UW101 5091660 YP_001194276.1 CDS Fjoh_1925 NC_009441.1 2226110 2227657 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2226110..2227657 Flavobacterium johnsoniae UW101 5091661 YP_001194277.1 CDS Fjoh_1926 NC_009441.1 2227843 2229816 D hypothetical protein 2227843..2229816 Flavobacterium johnsoniae UW101 5091662 YP_001194278.1 CDS Fjoh_1927 NC_009441.1 2229859 2231220 D PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent enzyme subunit beta 2229859..2231220 Flavobacterium johnsoniae UW101 5091663 YP_001194279.1 CDS Fjoh_1928 NC_009441.1 2231352 2232623 D hypothetical protein 2231352..2232623 Flavobacterium johnsoniae UW101 5091664 YP_001194280.1 CDS Fjoh_1929 NC_009441.1 2232676 2232903 D hypothetical protein 2232676..2232903 Flavobacterium johnsoniae UW101 5091665 YP_001194281.1 CDS Fjoh_1930 NC_009441.1 2232968 2234437 R PFAM: amino acid permease-associated region; amino acid permease complement(2232968..2234437) Flavobacterium johnsoniae UW101 5091666 YP_001194282.1 CDS Fjoh_1931 NC_009441.1 2234711 2235598 D hypothetical protein 2234711..2235598 Flavobacterium johnsoniae UW101 5091667 YP_001194283.1 CDS Fjoh_1932 NC_009441.1 2235611 2236753 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase 2235611..2236753 Flavobacterium johnsoniae UW101 5091668 YP_001194284.1 CDS rpsU NC_009441.1 2236841 2237035 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2236841..2237035 Flavobacterium johnsoniae UW101 5091669 YP_001194285.1 CDS Fjoh_1934 NC_009441.1 2237136 2238029 D PFAM: phage integrase; phage integrase domain protein SAM domain protein; phage integrase 2237136..2238029 Flavobacterium johnsoniae UW101 5091670 YP_001194286.1 CDS Fjoh_1935 NC_009441.1 2238063 2238365 D TIGRFAM: ribosomal subunit interface protein; sigma 54 modulation protein/ribosomal protein S30EA 2238063..2238365 Flavobacterium johnsoniae UW101 5091671 YP_001194287.1 CDS Fjoh_1936 NC_009441.1 2238888 2240075 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2238888..2240075 Flavobacterium johnsoniae UW101 5093552 YP_001194288.1 CDS Fjoh_1937 NC_009441.1 2240227 2240424 D TIGRFAM: preprotein translocase, SecE subunit; preprotein translocase subunit SecE 2240227..2240424 Flavobacterium johnsoniae UW101 5093553 YP_001194289.1 CDS Fjoh_1938 NC_009441.1 2240435 2240986 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor 2240435..2240986 Flavobacterium johnsoniae UW101 5091674 YP_001194290.1 CDS rplK NC_009441.1 2241054 2241491 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 2241054..2241491 Flavobacterium johnsoniae UW101 5091675 YP_001194291.1 CDS rplA NC_009441.1 2241505 2242194 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 2241505..2242194 Flavobacterium johnsoniae UW101 5091676 YP_001194292.1 CDS rplJ NC_009441.1 2242217 2242720 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 2242217..2242720 Flavobacterium johnsoniae UW101 5091677 YP_001194293.1 CDS rplL NC_009441.1 2242813 2243184 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 2242813..2243184 Flavobacterium johnsoniae UW101 5091678 YP_001194294.1 CDS rpoB NC_009441.1 2243449 2247261 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 2243449..2247261 Flavobacterium johnsoniae UW101 5091679 YP_001194295.1 CDS Fjoh_1944 NC_009441.1 2247544 2251854 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 2247544..2251854 Flavobacterium johnsoniae UW101 5091680 YP_001194296.1 CDS Fjoh_1945 NC_009441.1 2251866 2252177 D hypothetical protein 2251866..2252177 Flavobacterium johnsoniae UW101 5091681 YP_001194297.1 CDS Fjoh_1946 NC_009441.1 2252531 2253268 D hypothetical protein 2252531..2253268 Flavobacterium johnsoniae UW101 5091682 YP_001194298.1 CDS Fjoh_1947 NC_009441.1 2253352 2254944 R TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; peptide chain release factor 3 complement(2253352..2254944) Flavobacterium johnsoniae UW101 5091683 YP_001194299.1 CDS Fjoh_1948 NC_009441.1 2255093 2256532 R converts 1,4-alpha-D-glucans to maltodextrin; alpha-amylase complement(2255093..2256532) Flavobacterium johnsoniae UW101 5091684 YP_001194300.1 CDS Fjoh_1949 NC_009441.1 2257008 2258435 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2257008..2258435 Flavobacterium johnsoniae UW101 5091685 YP_001194301.1 CDS Fjoh_1950 NC_009441.1 2258514 2259467 D PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase 2258514..2259467 Flavobacterium johnsoniae UW101 5091686 YP_001194302.1 CDS Fjoh_1951 NC_009441.1 2259879 2262650 D catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2259879..2262650 Flavobacterium johnsoniae UW101 5091687 YP_001194303.1 CDS Fjoh_1952 NC_009441.1 2262734 2265031 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2262734..2265031 Flavobacterium johnsoniae UW101 5091688 YP_001194304.1 CDS Fjoh_1953 NC_009441.1 2265086 2266468 R PFAM: Kelch repeat-containing protein; kelch repeat-containing protein complement(2265086..2266468) Flavobacterium johnsoniae UW101 5091689 YP_001194305.1 CDS Fjoh_1954 NC_009441.1 2266712 2267866 D PFAM: NLP/P60 protein; Peptidoglycan-binding LysM; NLP/P60 protein 2266712..2267866 Flavobacterium johnsoniae UW101 5091690 YP_001194306.1 CDS Fjoh_1955 NC_009441.1 2267858 2268259 R PFAM: response regulator receiver; response regulator receiver protein complement(2267858..2268259) Flavobacterium johnsoniae UW101 5091691 YP_001194307.1 CDS Fjoh_1956 NC_009441.1 2268249 2269682 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(2268249..2269682) Flavobacterium johnsoniae UW101 5091692 YP_001194308.1 CDS Fjoh_1957 NC_009441.1 2270087 2271640 R PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; ATPase central domain-containing protein complement(2270087..2271640) Flavobacterium johnsoniae UW101 5091693 YP_001194309.1 CDS Fjoh_1958 NC_009441.1 2271641 2272153 R hypothetical protein complement(2271641..2272153) Flavobacterium johnsoniae UW101 5091694 YP_001194310.1 CDS Fjoh_1959 NC_009441.1 2272361 2274061 R hypothetical protein complement(2272361..2274061) Flavobacterium johnsoniae UW101 5091695 YP_001194311.1 CDS Fjoh_1960 NC_009441.1 2274081 2274530 R hypothetical protein complement(2274081..2274530) Flavobacterium johnsoniae UW101 5091696 YP_001194312.1 CDS Fjoh_1961 NC_009441.1 2274818 2276227 D PFAM: amino acid permease-associated region; amino acid permease 2274818..2276227 Flavobacterium johnsoniae UW101 5091697 YP_001194313.1 CDS Fjoh_1962 NC_009441.1 2276433 2276966 R hypothetical protein complement(2276433..2276966) Flavobacterium johnsoniae UW101 5091698 YP_001194314.1 CDS Fjoh_1963 NC_009441.1 2277052 2277678 R PFAM: 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase complement(2277052..2277678) Flavobacterium johnsoniae UW101 5091699 YP_001194315.1 CDS Fjoh_1964 NC_009441.1 2277687 2278463 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth complement(2277687..2278463) Flavobacterium johnsoniae UW101 5091700 YP_001194316.1 CDS Fjoh_1965 NC_009441.1 2278514 2279893 R TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Excinuclease ABC, C subunit domain protein; Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon complement(2278514..2279893) Flavobacterium johnsoniae UW101 5091701 YP_001194317.1 CDS Fjoh_1966 NC_009441.1 2279964 2281304 R PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(2279964..2281304) Flavobacterium johnsoniae UW101 5091702 YP_001194318.1 CDS Fjoh_1967 NC_009441.1 2281321 2281770 R PFAM: peptidase S24, S26A and S26B; prophage repressor complement(2281321..2281770) Flavobacterium johnsoniae UW101 5091703 YP_001194319.1 CDS Fjoh_1968 NC_009441.1 2281869 2282642 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 2281869..2282642 Flavobacterium johnsoniae UW101 5091704 YP_001194320.1 CDS Fjoh_1969 NC_009441.1 2282873 2283634 R PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(2282873..2283634) Flavobacterium johnsoniae UW101 5091705 YP_001194321.1 CDS Fjoh_1970 NC_009441.1 2283977 2285644 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(2283977..2285644) Flavobacterium johnsoniae UW101 5091706 YP_001194322.1 CDS Fjoh_1971 NC_009441.1 2285830 2286954 R PFAM: Osmosensitive K+ channel His kinase sensor; UspA domain protein; osmosensitive K+ channel His kinase sensor complement(2285830..2286954) Flavobacterium johnsoniae UW101 5091707 YP_001194323.1 CDS Fjoh_1972 NC_009441.1 2287037 2288116 R hypothetical protein complement(2287037..2288116) Flavobacterium johnsoniae UW101 5091708 YP_001194324.1 CDS Fjoh_1973 NC_009441.1 2288473 2289024 R one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C complement(2288473..2289024) Flavobacterium johnsoniae UW101 5091709 YP_001194325.1 CDS Fjoh_1974 NC_009441.1 2289141 2291198 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; K+-transporting ATPase subunit B complement(2289141..2291198) Flavobacterium johnsoniae UW101 5091710 YP_001194326.1 CDS Fjoh_1975 NC_009441.1 2291380 2293101 R catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A complement(2291380..2293101) Flavobacterium johnsoniae UW101 5094337 YP_001194327.1 CDS Fjoh_1976 NC_009441.1 2293402 2293683 R hypothetical protein complement(2293402..2293683) Flavobacterium johnsoniae UW101 5094338 YP_001194328.1 CDS Fjoh_1977 NC_009441.1 2294054 2295397 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(2294054..2295397) Flavobacterium johnsoniae UW101 5094339 YP_001194329.1 CDS Fjoh_1978 NC_009441.1 2295565 2296767 D PFAM: polysaccharide deacetylase; polysaccharide deacetylase 2295565..2296767 Flavobacterium johnsoniae UW101 5094340 YP_001194330.1 CDS Fjoh_1979 NC_009441.1 2296882 2300421 R aminopeptidase N-like protein complement(2296882..2300421) Flavobacterium johnsoniae UW101 5094341 YP_001194331.1 CDS Fjoh_1980 NC_009441.1 2300426 2301310 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2300426..2301310) Flavobacterium johnsoniae UW101 5094342 YP_001194332.1 CDS Fjoh_1981 NC_009441.1 2301425 2301631 R SMART: helix-turn-helix domain protein; XRE family transcriptional regulator complement(2301425..2301631) Flavobacterium johnsoniae UW101 5094343 YP_001194333.1 CDS Fjoh_1982 NC_009441.1 2301634 2302149 R hypothetical protein complement(2301634..2302149) Flavobacterium johnsoniae UW101 5094344 YP_001194334.1 CDS Fjoh_1983 NC_009441.1 2302324 2303340 D PFAM: luciferase; luciferase 2302324..2303340 Flavobacterium johnsoniae UW101 5094345 YP_001194335.1 CDS Fjoh_1984 NC_009441.1 2309749 2310768 R TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold; peptidase complement(2309749..2310768) Flavobacterium johnsoniae UW101 5093558 YP_001194336.1 CDS Fjoh_1985 NC_009441.1 2310942 2317136 D PFAM: Hyalin; FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; FG-GAP repeat-containing protein 2310942..2317136 Flavobacterium johnsoniae UW101 5094347 YP_001194337.1 CDS Fjoh_1986 NC_009441.1 2317140 2318054 D hypothetical protein 2317140..2318054 Flavobacterium johnsoniae UW101 5094348 YP_001194338.1 CDS Fjoh_1987 NC_009441.1 2318055 2318696 R PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator complement(2318055..2318696) Flavobacterium johnsoniae UW101 5094349 YP_001194339.1 CDS Fjoh_1988 NC_009441.1 2318709 2320901 R PFAM: TPR repeat-containing protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; integral membrane sensor signal transduction histidine kinase complement(2318709..2320901) Flavobacterium johnsoniae UW101 5094350 YP_001194340.1 CDS Fjoh_1989 NC_009441.1 2321190 2321636 D hypothetical protein 2321190..2321636 Flavobacterium johnsoniae UW101 5094351 YP_001194341.1 CDS Fjoh_1990 NC_009441.1 2322598 2323629 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; alanine racemase 2322598..2323629 Flavobacterium johnsoniae UW101 5094352 YP_001194342.1 CDS Fjoh_1991 NC_009441.1 2323655 2324515 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 2323655..2324515 Flavobacterium johnsoniae UW101 5094353 YP_001194343.1 CDS Fjoh_1992 NC_009441.1 2324583 2325125 D PFAM: PEBP family protein; PEBP family protein 2324583..2325125 Flavobacterium johnsoniae UW101 5094354 YP_001194344.1 CDS Fjoh_1993 NC_009441.1 2325400 2327553 D PFAM: glycoside hydrolase family 67; glycosyl hydrolase 67 C-teriminal domain protein; Glycosyl hydrolase 67 middle domain protein; alpha-glucuronidase 2325400..2327553 Flavobacterium johnsoniae UW101 5094355 YP_001194345.1 CDS Fjoh_1994 NC_009441.1 2327637 2328374 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2327637..2328374 Flavobacterium johnsoniae UW101 5094356 YP_001194346.1 CDS Fjoh_1995 NC_009441.1 2328556 2329719 D TIGRFAM: mannonate dehydratase; PFAM: Mannonate dehydratase; Xylose isomerase domain protein TIM barrel; mannonate dehydratase 2328556..2329719 Flavobacterium johnsoniae UW101 5094357 YP_001194347.1 CDS Fjoh_1996 NC_009441.1 2329837 2330946 D PFAM: glycoside hydrolase, family 10; endo-1,4-beta-xylanase 2329837..2330946 Flavobacterium johnsoniae UW101 5094358 YP_001194348.1 CDS Fjoh_1997 NC_009441.1 2331204 2332637 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; sugar (glycoside-Pentoside-hexuronide) transporter 2331204..2332637 Flavobacterium johnsoniae UW101 5094359 YP_001194349.1 CDS Fjoh_1998 NC_009441.1 2332661 2333695 D PFAM: glycoside hydrolase, family 43; alpha-N-arabinofuranosidase 2332661..2333695 Flavobacterium johnsoniae UW101 5094360 YP_001194350.1 CDS Fjoh_1999 NC_009441.1 2334000 2335007 D PFAM: regulatory protein GntR, HTH; regulatory protein GntR 2334000..2335007 Flavobacterium johnsoniae UW101 5094361 YP_001194351.1 CDS Fjoh_2000 NC_009441.1 2335010 2336491 D PFAM: carbohydrate kinase, FGGY; carbohydrate kinase 2335010..2336491 Flavobacterium johnsoniae UW101 5094362 YP_001194352.1 CDS Fjoh_2001 NC_009441.1 2336501 2337826 D catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 2336501..2337826 Flavobacterium johnsoniae UW101 5094363 YP_001194353.1 CDS Fjoh_2002 NC_009441.1 2338143 2338799 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 2338143..2338799 Flavobacterium johnsoniae UW101 5094364 YP_001194354.1 CDS Fjoh_2003 NC_009441.1 2338891 2339766 R PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(2338891..2339766) Flavobacterium johnsoniae UW101 5094365 YP_001194355.1 CDS Fjoh_2004 NC_009441.1 2339870 2340619 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 2339870..2340619 Flavobacterium johnsoniae UW101 5094366 YP_001194356.1 CDS Fjoh_2005 NC_009441.1 2340620 2340970 D hypothetical protein 2340620..2340970 Flavobacterium johnsoniae UW101 5094367 YP_001194357.1 CDS Fjoh_2006 NC_009441.1 2340980 2341591 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(2340980..2341591) Flavobacterium johnsoniae UW101 5094368 YP_001194358.1 CDS Fjoh_2007 NC_009441.1 2341872 2343023 D PFAM: FecR protein; FecR anti-FecI sigma factor 2341872..2343023 Flavobacterium johnsoniae UW101 5094369 YP_001194359.1 CDS Fjoh_2008 NC_009441.1 2343196 2346792 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 2343196..2346792 Flavobacterium johnsoniae UW101 5094370 YP_001194360.1 CDS Fjoh_2009 NC_009441.1 2346810 2348213 D hypothetical protein 2346810..2348213 Flavobacterium johnsoniae UW101 5094371 YP_001194361.1 CDS Fjoh_2010 NC_009441.1 2348279 2349478 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2348279..2349478 Flavobacterium johnsoniae UW101 5094372 YP_001194362.1 CDS Fjoh_2011 NC_009441.1 2349575 2350711 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2349575..2350711 Flavobacterium johnsoniae UW101 5094373 YP_001194363.1 CDS Fjoh_2012 NC_009441.1 2350825 2353614 D PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 2350825..2353614 Flavobacterium johnsoniae UW101 5094374 YP_001194364.1 CDS Fjoh_2013 NC_009441.1 2353866 2355866 D PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein, transmembrane region 2353866..2355866 Flavobacterium johnsoniae UW101 5094375 YP_001194365.1 CDS Fjoh_2014 NC_009441.1 2355880 2357388 D PFAM: aminotransferase, class V; class V aminotransferase 2355880..2357388 Flavobacterium johnsoniae UW101 5094376 YP_001194366.1 CDS Fjoh_2015 NC_009441.1 2357592 2358512 R PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; N-acetyltransferase GCN5 complement(2357592..2358512) Flavobacterium johnsoniae UW101 5094377 YP_001194367.1 CDS Fjoh_2016 NC_009441.1 2358654 2360258 R hypothetical protein complement(2358654..2360258) Flavobacterium johnsoniae UW101 5094378 YP_001194368.1 CDS Fjoh_2017 NC_009441.1 2360441 2360725 D hypothetical protein 2360441..2360725 Flavobacterium johnsoniae UW101 5094379 YP_001194369.1 CDS Fjoh_2019 NC_009441.1 2361555 2365505 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase complement(2361555..2365505) Flavobacterium johnsoniae UW101 5093559 YP_001194370.1 CDS Fjoh_2020 NC_009441.1 2365896 2368913 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 2365896..2368913 Flavobacterium johnsoniae UW101 5094381 YP_001194371.1 CDS Fjoh_2021 NC_009441.1 2368930 2370453 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2368930..2370453 Flavobacterium johnsoniae UW101 5094382 YP_001194372.1 CDS Fjoh_2022 NC_009441.1 2370733 2371905 D hypothetical protein 2370733..2371905 Flavobacterium johnsoniae UW101 5094383 YP_001194373.1 CDS Fjoh_2023 NC_009441.1 2372184 2373212 D hypothetical protein 2372184..2373212 Flavobacterium johnsoniae UW101 5094384 YP_001194374.1 CDS Fjoh_2024 NC_009441.1 2373411 2375222 D PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, sugar binding; glycoside hydrolase 2373411..2375222 Flavobacterium johnsoniae UW101 5094385 YP_001194375.2 CDS Fjoh_2025 NC_009441.1 2375455 2376477 D PFAM: glycoside hydrolase, family 43; alpha-N-arabinofuranosidase 2375455..2376477 Flavobacterium johnsoniae UW101 5094386 YP_001194376.1 CDS Fjoh_2026 NC_009441.1 2376502 2377680 D PFAM: Aldose 1-epimerase; aldose 1-epimerase 2376502..2377680 Flavobacterium johnsoniae UW101 5094387 YP_001194377.1 CDS Fjoh_2027 NC_009441.1 2377877 2378854 D PFAM: glycoside hydrolase, family 43; Glycosyl hydrolase family 32, N terminal domain protein; glycoside hydrolase 2377877..2378854 Flavobacterium johnsoniae UW101 5094388 YP_001194378.1 CDS Fjoh_2028 NC_009441.1 2379024 2381138 D PFAM: coagulation factor 5/8 type domain protein; alpha-L-fucosidase 2379024..2381138 Flavobacterium johnsoniae UW101 5094389 YP_001194379.1 CDS Fjoh_2029 NC_009441.1 2381279 2383192 D TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate deaminase 2381279..2383192 Flavobacterium johnsoniae UW101 5094390 YP_001194380.1 CDS Fjoh_2030 NC_009441.1 2383576 2384289 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(2383576..2384289) Flavobacterium johnsoniae UW101 5094391 YP_001194381.1 CDS Fjoh_2031 NC_009441.1 2384357 2385415 R PFAM: histidine kinase internal region; histidine kinase internal region complement(2384357..2385415) Flavobacterium johnsoniae UW101 5092045 YP_001194382.1 CDS Fjoh_2032 NC_009441.1 2385537 2387780 D TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; alpha-1,2-mannosidase 2385537..2387780 Flavobacterium johnsoniae UW101 5092046 YP_001194383.1 CDS Fjoh_2033 NC_009441.1 2387824 2389701 D PFAM: Na+/solute symporter; Na+/solute symporter 2387824..2389701 Flavobacterium johnsoniae UW101 5092047 YP_001194384.1 CDS Fjoh_2034 NC_009441.1 2390021 2390986 D PFAM: glycosidase, PH1107-related; PH1107-like glycosidase 2390021..2390986 Flavobacterium johnsoniae UW101 5092048 YP_001194385.1 CDS Fjoh_2035 NC_009441.1 2390994 2392064 D hypothetical protein 2390994..2392064 Flavobacterium johnsoniae UW101 5092049 YP_001194386.1 CDS Fjoh_2036 NC_009441.1 2392073 2393155 D hypothetical protein 2392073..2393155 Flavobacterium johnsoniae UW101 5092050 YP_001194387.1 CDS Fjoh_2037 NC_009441.1 2393325 2394350 D PFAM: peptidase T2, asparaginase 2; N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 2393325..2394350 Flavobacterium johnsoniae UW101 5092051 YP_001194388.1 CDS Fjoh_2038 NC_009441.1 2394504 2397644 D PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; beta-galactosidase 2394504..2397644 Flavobacterium johnsoniae UW101 5092052 YP_001194389.1 CDS Fjoh_2039 NC_009441.1 2397653 2399971 D PFAM: glycoside hydrolase, family 20; beta-N-acetylhexosaminidase 2397653..2399971 Flavobacterium johnsoniae UW101 5092053 YP_001194390.1 CDS Fjoh_2040 NC_009441.1 2400248 2401732 D PFAM: glycoside hydrolase, family 29 (alpha-L-fucosidase); alpha-L-fucosidase 2400248..2401732 Flavobacterium johnsoniae UW101 5092054 YP_001194391.1 CDS Fjoh_2041 NC_009441.1 2401735 2403984 D TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; alpha-1,2-mannosidase 2401735..2403984 Flavobacterium johnsoniae UW101 5092055 YP_001194392.1 CDS Fjoh_2042 NC_009441.1 2403997 2406657 D PFAM: glycoside hydrolase, family 3 domain protein; PA14 domain protein; SMART: PA14-related domain protein; glycoside hydrolase family 3 protein 2403997..2406657 Flavobacterium johnsoniae UW101 5092056 YP_001194393.1 CDS Fjoh_2043 NC_009441.1 2406921 2410007 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 2406921..2410007 Flavobacterium johnsoniae UW101 5092057 YP_001194394.1 CDS Fjoh_2044 NC_009441.1 2410025 2411623 D hypothetical protein 2410025..2411623 Flavobacterium johnsoniae UW101 5092058 YP_001194395.1 CDS Fjoh_2045 NC_009441.1 2411715 2412764 D PFAM: glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase 2411715..2412764 Flavobacterium johnsoniae UW101 5092059 YP_001194396.1 CDS Fjoh_2046 NC_009441.1 2412776 2413108 D PFAM: protein of unknown function DUF718; hypothetical protein 2412776..2413108 Flavobacterium johnsoniae UW101 5092060 YP_001194397.1 CDS Fjoh_2047 NC_009441.1 2413261 2414232 D PFAM: peptidase M20; peptidase M28; peptidase M28 2413261..2414232 Flavobacterium johnsoniae UW101 5092061 YP_001194398.1 CDS Fjoh_2048 NC_009441.1 2414415 2414825 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 2414415..2414825 Flavobacterium johnsoniae UW101 5092062 YP_001194399.1 CDS Fjoh_2049 NC_009441.1 2414896 2417247 R PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS complement(2414896..2417247) Flavobacterium johnsoniae UW101 5092063 YP_001194400.1 CDS Fjoh_2050 NC_009441.1 2418019 2419302 R hypothetical protein complement(2418019..2419302) Flavobacterium johnsoniae UW101 5092064 YP_001194401.1 CDS Fjoh_2051 NC_009441.1 2419341 2421050 R hypothetical protein complement(2419341..2421050) Flavobacterium johnsoniae UW101 5092065 YP_001194402.1 CDS Fjoh_2052 NC_009441.1 2421187 2422275 R hypothetical protein complement(2421187..2422275) Flavobacterium johnsoniae UW101 5092066 YP_001194403.1 CDS Fjoh_2053 NC_009441.1 2422283 2422642 R hypothetical protein complement(2422283..2422642) Flavobacterium johnsoniae UW101 5092067 YP_001194404.1 CDS Fjoh_2054 NC_009441.1 2422632 2423771 R PFAM: Fibronectin, type III domain protein; fibronectin type III domain-containing protein complement(2422632..2423771) Flavobacterium johnsoniae UW101 5092068 YP_001194405.1 CDS Fjoh_2055 NC_009441.1 2423776 2424636 R hypothetical protein complement(2423776..2424636) Flavobacterium johnsoniae UW101 5092069 YP_001194406.1 CDS Fjoh_2056 NC_009441.1 2424713 2425081 R hypothetical protein complement(2424713..2425081) Flavobacterium johnsoniae UW101 5092070 YP_001194407.1 CDS Fjoh_2057 NC_009441.1 2425106 2426251 R hypothetical protein complement(2425106..2426251) Flavobacterium johnsoniae UW101 5092071 YP_001194408.1 CDS Fjoh_2058 NC_009441.1 2426341 2432106 R hypothetical protein complement(2426341..2432106) Flavobacterium johnsoniae UW101 5092072 YP_001194409.1 CDS Fjoh_2059 NC_009441.1 2432120 2439565 R hypothetical protein complement(2432120..2439565) Flavobacterium johnsoniae UW101 5092073 YP_001194410.1 CDS Fjoh_2060 NC_009441.1 2440181 2441353 R hypothetical protein complement(2440181..2441353) Flavobacterium johnsoniae UW101 5092074 YP_001194411.1 CDS Fjoh_2061 NC_009441.1 2441881 2442240 R hypothetical protein complement(2441881..2442240) Flavobacterium johnsoniae UW101 5092075 YP_001194412.1 CDS Fjoh_2063 NC_009441.1 2443111 2443548 R hypothetical protein complement(2443111..2443548) Flavobacterium johnsoniae UW101 5093560 YP_001194413.1 CDS Fjoh_2064 NC_009441.1 2443551 2443916 R hypothetical protein complement(2443551..2443916) Flavobacterium johnsoniae UW101 5092077 YP_001194414.1 CDS Fjoh_2065 NC_009441.1 2443974 2444528 R hypothetical protein complement(2443974..2444528) Flavobacterium johnsoniae UW101 5092078 YP_001194415.1 CDS Fjoh_2066 NC_009441.1 2444851 2445339 R hypothetical protein complement(2444851..2445339) Flavobacterium johnsoniae UW101 5092079 YP_001194416.1 CDS Fjoh_2067 NC_009441.1 2445350 2448850 R hypothetical protein complement(2445350..2448850) Flavobacterium johnsoniae UW101 5092080 YP_001194417.1 CDS Fjoh_2068 NC_009441.1 2448851 2451019 R hypothetical protein complement(2448851..2451019) Flavobacterium johnsoniae UW101 5092081 YP_001194418.1 CDS Fjoh_2069 NC_009441.1 2451045 2451542 R hypothetical protein complement(2451045..2451542) Flavobacterium johnsoniae UW101 5092082 YP_001194419.1 CDS Fjoh_2070 NC_009441.1 2451571 2452023 R PFAM: CHAP domain containing protein; CHAP domain-containing protein complement(2451571..2452023) Flavobacterium johnsoniae UW101 5092083 YP_001194420.1 CDS Fjoh_2071 NC_009441.1 2452020 2452307 R hypothetical protein complement(2452020..2452307) Flavobacterium johnsoniae UW101 5092084 YP_001194421.1 CDS Fjoh_2072 NC_009441.1 2452625 2452870 R hypothetical protein complement(2452625..2452870) Flavobacterium johnsoniae UW101 5092085 YP_001194422.1 CDS Fjoh_2073 NC_009441.1 2453622 2454338 R hypothetical protein complement(2453622..2454338) Flavobacterium johnsoniae UW101 5092086 YP_001194423.1 CDS Fjoh_2074 NC_009441.1 2454367 2454645 R hypothetical protein complement(2454367..2454645) Flavobacterium johnsoniae UW101 5092087 YP_001194424.1 CDS Fjoh_2075 NC_009441.1 2455097 2455762 D PFAM: peptidase S24, S26A and S26B; phage repressor 2455097..2455762 Flavobacterium johnsoniae UW101 5092088 YP_001194425.1 CDS Fjoh_2076 NC_009441.1 2456043 2460164 D PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase 2456043..2460164 Flavobacterium johnsoniae UW101 5092089 YP_001194426.1 CDS Fjoh_2077 NC_009441.1 2460478 2463504 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 2460478..2463504 Flavobacterium johnsoniae UW101 5092090 YP_001194427.1 CDS Fjoh_2078 NC_009441.1 2463548 2465140 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2463548..2465140 Flavobacterium johnsoniae UW101 5092091 YP_001194428.1 CDS Fjoh_2079 NC_009441.1 2465322 2466416 D PFAM: glycoside hydrolase, family 10; endo-1,4-beta-xylanase 2465322..2466416 Flavobacterium johnsoniae UW101 5092092 YP_001194429.1 CDS Fjoh_2080 NC_009441.1 2466528 2467427 D PFAM: PKD domain containing protein; PKD domain-containing protein 2466528..2467427 Flavobacterium johnsoniae UW101 5092093 YP_001194430.1 CDS Fjoh_2081 NC_009441.1 2467503 2468918 D hypothetical protein 2467503..2468918 Flavobacterium johnsoniae UW101 5092094 YP_001194431.1 CDS Fjoh_2082 NC_009441.1 2469121 2470923 D PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; beta-glucuronidase 2469121..2470923 Flavobacterium johnsoniae UW101 5092095 YP_001194432.1 CDS Fjoh_2083 NC_009441.1 2471180 2471848 R PFAM: response regulator receiver; response regulator receiver protein complement(2471180..2471848) Flavobacterium johnsoniae UW101 5092096 YP_001194433.1 CDS Fjoh_2084 NC_009441.1 2471974 2472210 D hypothetical protein 2471974..2472210 Flavobacterium johnsoniae UW101 5092097 YP_001194434.1 CDS Fjoh_2085 NC_009441.1 2472273 2474315 D PFAM: TPR repeat-containing protein; ATP-binding region, ATPase domain protein domain protein; SMART: Tetratricopeptide domain protein; signal transduction histidine kinase 2472273..2474315 Flavobacterium johnsoniae UW101 5092098 YP_001194435.1 CDS Fjoh_2086 NC_009441.1 2474794 2475426 D PFAM: 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 2474794..2475426 Flavobacterium johnsoniae UW101 5092099 YP_001194436.1 CDS Fjoh_2087 NC_009441.1 2475466 2476434 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 2475466..2476434 Flavobacterium johnsoniae UW101 5093850 YP_001194437.1 CDS Fjoh_2088 NC_009441.1 2476740 2485424 D TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; amino acid adenylation protein 2476740..2485424 Flavobacterium johnsoniae UW101 5093851 YP_001194438.1 CDS Fjoh_2089 NC_009441.1 2485498 2491914 D TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; amino acid adenylation protein 2485498..2491914 Flavobacterium johnsoniae UW101 5093852 YP_001194439.1 CDS Fjoh_2090 NC_009441.1 2491921 2496627 D TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; amino acid adenylation protein 2491921..2496627 Flavobacterium johnsoniae UW101 5093853 YP_001194440.1 CDS Fjoh_2091 NC_009441.1 2496656 2497432 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2496656..2497432 Flavobacterium johnsoniae UW101 5093854 YP_001194441.1 CDS Fjoh_2092 NC_009441.1 2497466 2501686 D PFAM: AMP-dependent synthetase and ligase; condensation domain protein; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; AMP-dependent synthetase/ligase 2497466..2501686 Flavobacterium johnsoniae UW101 5093855 YP_001194442.1 CDS Fjoh_2093 NC_009441.1 2502107 2509339 D TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; amino acid adenylation protein 2502107..2509339 Flavobacterium johnsoniae UW101 5093856 YP_001194443.1 CDS Fjoh_2094 NC_009441.1 2509396 2510775 D PFAM: aminotransferase class-III; class III aminotransferase 2509396..2510775 Flavobacterium johnsoniae UW101 5093857 YP_001194444.1 CDS Fjoh_2095 NC_009441.1 2510756 2520943 D TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; amino acid adenylation protein 2510756..2520943 Flavobacterium johnsoniae UW101 5093858 YP_001194445.1 CDS Fjoh_2096 NC_009441.1 2520964 2522571 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 2520964..2522571 Flavobacterium johnsoniae UW101 5093859 YP_001194446.1 CDS Fjoh_2097 NC_009441.1 2522625 2528603 D TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; amino acid adenylation protein 2522625..2528603 Flavobacterium johnsoniae UW101 5093860 YP_001194447.1 CDS Fjoh_2098 NC_009441.1 2528772 2531156 D PFAM: TonB-dependent receptor; TonB-dependent receptor 2528772..2531156 Flavobacterium johnsoniae UW101 5093861 YP_001194448.1 CDS Fjoh_2099 NC_009441.1 2531169 2531888 D PFAM: Thioesterase; thioesterase 2531169..2531888 Flavobacterium johnsoniae UW101 5093862 YP_001194449.1 CDS Fjoh_2100 NC_009441.1 2531930 2532289 D hypothetical protein 2531930..2532289 Flavobacterium johnsoniae UW101 5093863 YP_001194450.1 CDS Fjoh_2101 NC_009441.1 2532301 2533926 D TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase; cyclic peptide transporter 2532301..2533926 Flavobacterium johnsoniae UW101 5093864 YP_001194451.1 CDS Fjoh_2102 NC_009441.1 2534015 2538460 D TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; amino acid adenylation protein 2534015..2538460 Flavobacterium johnsoniae UW101 5093865 YP_001194452.1 CDS Fjoh_2103 NC_009441.1 2538497 2540434 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2538497..2540434 Flavobacterium johnsoniae UW101 5093866 YP_001194453.1 CDS Fjoh_2104 NC_009441.1 2540496 2541863 D hypothetical protein 2540496..2541863 Flavobacterium johnsoniae UW101 5093867 YP_001194454.1 CDS Fjoh_2105 NC_009441.1 2541980 2543023 R PFAM: beta-lactamase; beta-lactamase complement(2541980..2543023) Flavobacterium johnsoniae UW101 5093868 YP_001194455.1 CDS Fjoh_2108 NC_009441.1 2552070 2552468 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(2552070..2552468) Flavobacterium johnsoniae UW101 5093569 YP_001194456.1 CDS Fjoh_2109 NC_009441.1 2552470 2553600 R PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(2552470..2553600) Flavobacterium johnsoniae UW101 5093870 YP_001194457.1 CDS Fjoh_2110 NC_009441.1 2553603 2555063 R PFAM: permease YjgP/YjgQ family protein; YjgP/YjgQ family permease complement(2553603..2555063) Flavobacterium johnsoniae UW101 5093871 YP_001194458.2 CDS Fjoh_2111 NC_009441.1 2555072 2555719 R lipoprotein carrier protein LolA complement(2555072..2555719) Flavobacterium johnsoniae UW101 5093872 YP_001194459.1 CDS Fjoh_2112 NC_009441.1 2555772 2558222 R PFAM: cell divisionFtsK/SpoIIIE; cell division protein FtsK/SpoIIIE complement(2555772..2558222) Flavobacterium johnsoniae UW101 5093873 YP_001194460.1 CDS Fjoh_2113 NC_009441.1 2558238 2558612 R PFAM: diacylglycerol kinase; diacylglycerol kinase complement(2558238..2558612) Flavobacterium johnsoniae UW101 5093874 YP_001194461.1 CDS Fjoh_2114 NC_009441.1 2558626 2559123 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; redoxin domain-containing protein complement(2558626..2559123) Flavobacterium johnsoniae UW101 5093875 YP_001194462.1 CDS Fjoh_2115 NC_009441.1 2559421 2559678 R hypothetical protein complement(2559421..2559678) Flavobacterium johnsoniae UW101 5093876 YP_001194463.1 CDS Fjoh_2116 NC_009441.1 2559745 2560053 R PFAM: Thioredoxin domain; thioredoxin domain-containing protein complement(2559745..2560053) Flavobacterium johnsoniae UW101 5093877 YP_001194464.1 CDS Fjoh_2117 NC_009441.1 2560293 2560931 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase complement(2560293..2560931) Flavobacterium johnsoniae UW101 5093878 YP_001194465.1 CDS Fjoh_2118 NC_009441.1 2561057 2562670 R PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family protein complement(2561057..2562670) Flavobacterium johnsoniae UW101 5093879 YP_001194466.1 CDS Fjoh_2119 NC_009441.1 2562673 2563119 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2562673..2563119) Flavobacterium johnsoniae UW101 5093880 YP_001194467.1 CDS Fjoh_2120 NC_009441.1 2563303 2563644 R hypothetical protein complement(2563303..2563644) Flavobacterium johnsoniae UW101 5093881 YP_001194468.1 CDS Fjoh_2121 NC_009441.1 2563667 2564938 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(2563667..2564938) Flavobacterium johnsoniae UW101 5093882 YP_001194469.1 CDS Fjoh_2122 NC_009441.1 2564925 2566496 R PFAM: protein of unknown function DUF187; hypothetical protein complement(2564925..2566496) Flavobacterium johnsoniae UW101 5093883 YP_001194470.1 CDS anmK NC_009441.1 2566691 2567899 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(2566691..2567899) Flavobacterium johnsoniae UW101 5093884 YP_001194471.1 CDS Fjoh_2124 NC_009441.1 2568248 2568805 D PFAM: LemA family protein; LemA family protein 2568248..2568805 Flavobacterium johnsoniae UW101 5093885 YP_001194472.1 CDS Fjoh_2125 NC_009441.1 2568805 2569761 D hypothetical protein 2568805..2569761 Flavobacterium johnsoniae UW101 5093886 YP_001194473.1 CDS Fjoh_2126 NC_009441.1 2569868 2572705 D PFAM: KAP P-loop domain protein; KAP P-loop domain-containing protein 2569868..2572705 Flavobacterium johnsoniae UW101 5093887 YP_001194474.1 CDS Fjoh_2127 NC_009441.1 2572808 2573041 R hypothetical protein complement(2572808..2573041) Flavobacterium johnsoniae UW101 5093888 YP_001194475.1 CDS Fjoh_2128 NC_009441.1 2573697 2574509 R PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS complement(2573697..2574509) Flavobacterium johnsoniae UW101 5093889 YP_001194476.1 CDS Fjoh_2129 NC_009441.1 2574907 2577813 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD linked oxidase domain protein; D-lactate dehydrogenase 2574907..2577813 Flavobacterium johnsoniae UW101 5093890 YP_001194477.1 CDS Fjoh_2130 NC_009441.1 2578206 2580137 D PFAM: amino acid permease-associated region; amino acid permease 2578206..2580137 Flavobacterium johnsoniae UW101 5093891 YP_001194478.1 CDS Fjoh_2131 NC_009441.1 2580307 2581551 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cystathionine gamma-synthase complement(2580307..2581551) Flavobacterium johnsoniae UW101 5093892 YP_001194479.1 CDS Fjoh_2132 NC_009441.1 2581767 2582225 D PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator 2581767..2582225 Flavobacterium johnsoniae UW101 5093893 YP_001194480.1 CDS Fjoh_2133 NC_009441.1 2582567 2583970 D TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; dihydrolipoamide dehydrogenase 2582567..2583970 Flavobacterium johnsoniae UW101 5093894 YP_001194481.1 CDS Fjoh_2134 NC_009441.1 2584127 2584669 D PFAM: Lipocalin family protein; Lipocalin family protein 2584127..2584669 Flavobacterium johnsoniae UW101 5093895 YP_001194482.1 CDS Fjoh_2135 NC_009441.1 2584723 2585097 R PFAM: DoxX family protein; DoxX family protein complement(2584723..2585097) Flavobacterium johnsoniae UW101 5093896 YP_001194483.1 CDS Fjoh_2136 NC_009441.1 2585308 2586291 R hypothetical protein complement(2585308..2586291) Flavobacterium johnsoniae UW101 5093897 YP_001194484.1 CDS Fjoh_2137 NC_009441.1 2586400 2587686 D PFAM: Anthranilate synthase component I and chorismate binding protein; anthranilate synthase component I/chorismate-binding protein 2586400..2587686 Flavobacterium johnsoniae UW101 5093898 YP_001194485.1 CDS Fjoh_2138 NC_009441.1 2587887 2589197 D TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase 2587887..2589197 Flavobacterium johnsoniae UW101 5093899 YP_001194486.1 CDS Fjoh_2139 NC_009441.1 2589197 2591284 D PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein, transmembrane region 2589197..2591284 Flavobacterium johnsoniae UW101 5093900 YP_001194487.1 CDS Fjoh_2140 NC_009441.1 2591504 2592820 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; ammonium transporter complement(2591504..2592820) Flavobacterium johnsoniae UW101 5093901 YP_001194488.1 CDS Fjoh_2141 NC_009441.1 2593137 2594099 D PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; homoserine dehydrogenase, NAD-binding; oxidoreductase domain-containing protein 2593137..2594099 Flavobacterium johnsoniae UW101 5093902 YP_001194489.1 CDS Fjoh_2142 NC_009441.1 2594100 2594801 R hypothetical protein complement(2594100..2594801) Flavobacterium johnsoniae UW101 5093903 YP_001194490.1 CDS Fjoh_2143 NC_009441.1 2594956 2596491 D TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 2594956..2596491 Flavobacterium johnsoniae UW101 5093904 YP_001194491.1 CDS Fjoh_2144 NC_009441.1 2596599 2598188 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2596599..2598188) Flavobacterium johnsoniae UW101 5093905 YP_001194492.1 CDS Fjoh_2145 NC_009441.1 2598340 2598708 R hypothetical protein complement(2598340..2598708) Flavobacterium johnsoniae UW101 5092764 YP_001194493.1 CDS Fjoh_2146 NC_009441.1 2598774 2599640 R PFAM: esterase; esterase complement(2598774..2599640) Flavobacterium johnsoniae UW101 5092765 YP_001194494.1 CDS Fjoh_2147 NC_009441.1 2599730 2600233 R PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein complement(2599730..2600233) Flavobacterium johnsoniae UW101 5092766 YP_001194495.1 CDS Fjoh_2148 NC_009441.1 2600275 2600775 R PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein complement(2600275..2600775) Flavobacterium johnsoniae UW101 5092767 YP_001194496.1 CDS Fjoh_2149 NC_009441.1 2600765 2601091 R PFAM: regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; regulatory protein ArsR complement(2600765..2601091) Flavobacterium johnsoniae UW101 5092768 YP_001194497.1 CDS Fjoh_2150 NC_009441.1 2601271 2602341 R hypothetical protein complement(2601271..2602341) Flavobacterium johnsoniae UW101 5092769 YP_001194498.1 CDS Fjoh_2151 NC_009441.1 2602448 2603635 R hypothetical protein complement(2602448..2603635) Flavobacterium johnsoniae UW101 5092770 YP_001194499.1 CDS Fjoh_2152 NC_009441.1 2603755 2604468 R hypothetical protein complement(2603755..2604468) Flavobacterium johnsoniae UW101 5092771 YP_001194500.1 CDS Fjoh_2153 NC_009441.1 2604506 2604973 R hypothetical protein complement(2604506..2604973) Flavobacterium johnsoniae UW101 5092772 YP_001194501.1 CDS Fjoh_2154 NC_009441.1 2605008 2605559 R hypothetical protein complement(2605008..2605559) Flavobacterium johnsoniae UW101 5092773 YP_001194502.1 CDS Fjoh_2155 NC_009441.1 2606617 2607066 R hypothetical protein complement(2606617..2607066) Flavobacterium johnsoniae UW101 5092774 YP_001194503.1 CDS Fjoh_2156 NC_009441.1 2607105 2607467 R hypothetical protein complement(2607105..2607467) Flavobacterium johnsoniae UW101 5092775 YP_001194504.1 CDS Fjoh_2157 NC_009441.1 2607562 2607972 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(2607562..2607972) Flavobacterium johnsoniae UW101 5092776 YP_001194505.1 CDS Fjoh_2158 NC_009441.1 2608178 2608519 D hypothetical protein 2608178..2608519 Flavobacterium johnsoniae UW101 5092777 YP_001194506.1 CDS Fjoh_2159 NC_009441.1 2610131 2611354 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase complement(2610131..2611354) Flavobacterium johnsoniae UW101 5092778 YP_001194507.1 CDS Fjoh_2160 NC_009441.1 2612000 2613454 R TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase NADH/NADPH small subunit complement(2612000..2613454) Flavobacterium johnsoniae UW101 5092779 YP_001194508.1 CDS Fjoh_2161 NC_009441.1 2613579 2618138 R PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; glutamate synthase complement(2613579..2618138) Flavobacterium johnsoniae UW101 5092780 YP_001194509.1 CDS sucC NC_009441.1 2618512 2619705 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2618512..2619705 Flavobacterium johnsoniae UW101 5092781 YP_001194510.1 CDS Fjoh_2163 NC_009441.1 2619918 2620715 R hypothetical protein complement(2619918..2620715) Flavobacterium johnsoniae UW101 5092782 YP_001194511.1 CDS Fjoh_2164 NC_009441.1 2620938 2621978 D PFAM: histidine kinase internal region; signal transduction histidine kinase LytS 2620938..2621978 Flavobacterium johnsoniae UW101 5092783 YP_001194512.1 CDS Fjoh_2165 NC_009441.1 2621982 2622689 D PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 2621982..2622689 Flavobacterium johnsoniae UW101 5092784 YP_001194513.1 CDS Fjoh_2166 NC_009441.1 2622836 2623300 R PFAM: protein of unknown function DUF1456; hypothetical protein complement(2622836..2623300) Flavobacterium johnsoniae UW101 5092785 YP_001194514.1 CDS Fjoh_2167 NC_009441.1 2623398 2624432 R PFAM: aminotransferase, class I and II; class I and II aminotransferase complement(2623398..2624432) Flavobacterium johnsoniae UW101 5092786 YP_001194515.1 CDS Fjoh_2168 NC_009441.1 2624434 2625444 R PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein complement(2624434..2625444) Flavobacterium johnsoniae UW101 5092787 YP_001194516.1 CDS Fjoh_2169 NC_009441.1 2625485 2626714 R hypothetical protein complement(2625485..2626714) Flavobacterium johnsoniae UW101 5092788 YP_001194517.1 CDS Fjoh_2170 NC_009441.1 2626817 2628808 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(2626817..2628808) Flavobacterium johnsoniae UW101 5092789 YP_001194518.1 CDS Fjoh_2171 NC_009441.1 2628856 2629794 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(2628856..2629794) Flavobacterium johnsoniae UW101 5092790 YP_001194519.1 CDS Fjoh_2172 NC_009441.1 2629881 2630117 R hypothetical protein complement(2629881..2630117) Flavobacterium johnsoniae UW101 5092791 YP_001194520.1 CDS Fjoh_2173 NC_009441.1 2630226 2630528 R PFAM: plasmid stabilization system; plasmid stabilization system protein complement(2630226..2630528) Flavobacterium johnsoniae UW101 5092792 YP_001194521.1 CDS Fjoh_2174 NC_009441.1 2630805 2631755 R PFAM: protein of unknown function DUF890; SAM-dependent methyltransferase complement(2630805..2631755) Flavobacterium johnsoniae UW101 5092793 YP_001194522.1 CDS Fjoh_2175 NC_009441.1 2631954 2632616 R TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic region; thiamine pyrophosphokinase complement(2631954..2632616) Flavobacterium johnsoniae UW101 5092794 YP_001194523.1 CDS Fjoh_2176 NC_009441.1 2632683 2633138 R PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(2632683..2633138) Flavobacterium johnsoniae UW101 5092795 YP_001194524.1 CDS Fjoh_2177 NC_009441.1 2633245 2633688 R hypothetical protein complement(2633245..2633688) Flavobacterium johnsoniae UW101 5092796 YP_001194525.1 CDS Fjoh_2178 NC_009441.1 2633734 2634216 R PFAM: transcription activator, effector binding; transcription activator, effector binding complement(2633734..2634216) Flavobacterium johnsoniae UW101 5092797 YP_001194526.1 CDS Fjoh_2179 NC_009441.1 2634221 2635042 R hypothetical protein complement(2634221..2635042) Flavobacterium johnsoniae UW101 5092798 YP_001194527.1 CDS Fjoh_2180 NC_009441.1 2635076 2637457 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(2635076..2637457) Flavobacterium johnsoniae UW101 5092799 YP_001194528.1 CDS Fjoh_2181 NC_009441.1 2637604 2639826 R TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase complement(2637604..2639826) Flavobacterium johnsoniae UW101 5092800 YP_001194529.1 CDS rplS NC_009441.1 2640112 2640462 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2640112..2640462) Flavobacterium johnsoniae UW101 5092801 YP_001194530.1 CDS Fjoh_2183 NC_009441.1 2640743 2641480 D hypothetical protein 2640743..2641480 Flavobacterium johnsoniae UW101 5092802 YP_001194531.1 CDS trmD NC_009441.1 2641545 2642225 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2641545..2642225) Flavobacterium johnsoniae UW101 5092803 YP_001194532.1 CDS Fjoh_2185 NC_009441.1 2642495 2642860 D hypothetical protein 2642495..2642860 Flavobacterium johnsoniae UW101 5092804 YP_001194533.1 CDS Fjoh_2186 NC_009441.1 2643140 2643601 D PFAM: transposase IS200-family protein; transposase IS200-family protein 2643140..2643601 Flavobacterium johnsoniae UW101 5092805 YP_001194534.1 CDS Fjoh_2187 NC_009441.1 2643610 2644149 D PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2643610..2644149 Flavobacterium johnsoniae UW101 5092806 YP_001194535.1 CDS Fjoh_2188 NC_009441.1 2644176 2645048 D PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 2644176..2645048 Flavobacterium johnsoniae UW101 5092807 YP_001194536.1 CDS Fjoh_2189 NC_009441.1 2645099 2645449 D PFAM: Cupin 2, conserved barrel domain protein; cupin 2645099..2645449 Flavobacterium johnsoniae UW101 5092808 YP_001194537.1 CDS Fjoh_2190 NC_009441.1 2645562 2646746 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 2645562..2646746 Flavobacterium johnsoniae UW101 5092809 YP_001194538.1 CDS Fjoh_2191 NC_009441.1 2646790 2647722 D PFAM: peptidylprolyl isomerase, FKBP-type; peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 2646790..2647722 Flavobacterium johnsoniae UW101 5092810 YP_001194539.1 CDS Fjoh_2192 NC_009441.1 2647824 2648132 D hypothetical protein 2647824..2648132 Flavobacterium johnsoniae UW101 5092811 YP_001194540.1 CDS Fjoh_2193 NC_009441.1 2648242 2648640 R PFAM: transcription elongation factor GreA/GreB domain protein; GreA/GreB family elongation factor complement(2648242..2648640) Flavobacterium johnsoniae UW101 5092812 YP_001194541.1 CDS Fjoh_2194 NC_009441.1 2649032 2649586 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase complement(2649032..2649586) Flavobacterium johnsoniae UW101 5092813 YP_001194542.1 CDS Fjoh_2195 NC_009441.1 2649777 2650670 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(2649777..2650670) Flavobacterium johnsoniae UW101 5092814 YP_001194543.1 CDS Fjoh_2196 NC_009441.1 2650796 2651131 D TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; export-related chaperone CsaA 2650796..2651131 Flavobacterium johnsoniae UW101 5092815 YP_001194544.1 CDS Fjoh_2197 NC_009441.1 2651204 2651749 R PFAM: protein of unknown function DUF1234; hypothetical protein complement(2651204..2651749) Flavobacterium johnsoniae UW101 5092816 YP_001194545.1 CDS Fjoh_2198 NC_009441.1 2651769 2652599 R PFAM: Alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein complement(2651769..2652599) Flavobacterium johnsoniae UW101 5092817 YP_001194546.1 CDS Fjoh_2199 NC_009441.1 2652737 2653120 R hypothetical protein complement(2652737..2653120) Flavobacterium johnsoniae UW101 5092818 YP_001194547.1 CDS Fjoh_2200 NC_009441.1 2653174 2654952 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2653174..2654952) Flavobacterium johnsoniae UW101 5092206 YP_001194548.1 CDS Fjoh_2201 NC_009441.1 2655083 2656264 D PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase 2655083..2656264 Flavobacterium johnsoniae UW101 5092207 YP_001194549.1 CDS Fjoh_2202 NC_009441.1 2656555 2657466 D transcription termination factor-like protein 2656555..2657466 Flavobacterium johnsoniae UW101 5092208 YP_001194550.1 CDS Fjoh_2203 NC_009441.1 2657545 2657820 D TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC 2657545..2657820 Flavobacterium johnsoniae UW101 5092209 YP_001194551.1 CDS Fjoh_2204 NC_009441.1 2658067 2658654 R hypothetical protein complement(2658067..2658654) Flavobacterium johnsoniae UW101 5092210 YP_001194552.1 CDS Fjoh_2205 NC_009441.1 2658656 2659933 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(2658656..2659933) Flavobacterium johnsoniae UW101 5092211 YP_001194553.1 CDS Fjoh_2206 NC_009441.1 2660053 2661207 R PFAM: protein of unknown function DUF323; hypothetical protein complement(2660053..2661207) Flavobacterium johnsoniae UW101 5092212 YP_001194554.1 CDS Fjoh_2207 NC_009441.1 2661311 2662363 R hypothetical protein complement(2661311..2662363) Flavobacterium johnsoniae UW101 5092213 YP_001194555.1 CDS Fjoh_2208 NC_009441.1 2662345 2663565 R PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P complement(2662345..2663565) Flavobacterium johnsoniae UW101 5092214 YP_001194556.1 CDS Fjoh_2209 NC_009441.1 2663590 2664186 R hypothetical protein complement(2663590..2664186) Flavobacterium johnsoniae UW101 5092215 YP_001194557.1 CDS Fjoh_2210 NC_009441.1 2664399 2665433 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2664399..2665433 Flavobacterium johnsoniae UW101 5092216 YP_001194558.1 CDS Fjoh_2211 NC_009441.1 2665419 2666135 R hypothetical protein complement(2665419..2666135) Flavobacterium johnsoniae UW101 5092217 YP_001194559.1 CDS Fjoh_2212 NC_009441.1 2666132 2666746 R hypothetical protein complement(2666132..2666746) Flavobacterium johnsoniae UW101 5092218 YP_001194560.1 CDS Fjoh_2213 NC_009441.1 2666958 2667824 D PFAM: pyruvate carboxyltransferase; pyruvate carboxyltransferase 2666958..2667824 Flavobacterium johnsoniae UW101 5092219 YP_001194561.1 CDS Fjoh_2214 NC_009441.1 2667850 2668167 D hypothetical protein 2667850..2668167 Flavobacterium johnsoniae UW101 5092220 YP_001194562.1 CDS Fjoh_2215 NC_009441.1 2668269 2668835 D hypothetical protein 2668269..2668835 Flavobacterium johnsoniae UW101 5092221 YP_001194563.1 CDS Fjoh_2216 NC_009441.1 2668832 2670232 D hypothetical protein 2668832..2670232 Flavobacterium johnsoniae UW101 5092222 YP_001194564.1 CDS Fjoh_2217 NC_009441.1 2670436 2671908 D TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 2670436..2671908 Flavobacterium johnsoniae UW101 5092223 YP_001194565.1 CDS Fjoh_2218 NC_009441.1 2671969 2672472 R hypothetical protein complement(2671969..2672472) Flavobacterium johnsoniae UW101 5092224 YP_001194566.1 CDS Fjoh_2219 NC_009441.1 2672556 2673452 R hypothetical protein complement(2672556..2673452) Flavobacterium johnsoniae UW101 5092225 YP_001194567.1 CDS Fjoh_2220 NC_009441.1 2673661 2674245 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(2673661..2674245) Flavobacterium johnsoniae UW101 5092226 YP_001194568.1 CDS Fjoh_2221 NC_009441.1 2674300 2675571 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(2674300..2675571) Flavobacterium johnsoniae UW101 5092227 YP_001194569.1 CDS Fjoh_2222 NC_009441.1 2675668 2676126 R PFAM: ferric-uptake regulator; ferric uptake regulator family protein complement(2675668..2676126) Flavobacterium johnsoniae UW101 5092228 YP_001194570.1 CDS Fjoh_2223 NC_009441.1 2676215 2678437 R TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA complement(2676215..2678437) Flavobacterium johnsoniae UW101 5092229 YP_001194571.1 CDS Fjoh_2224 NC_009441.1 2678728 2679516 R PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; tRNA/rRNA methyltransferase SpoU complement(2678728..2679516) Flavobacterium johnsoniae UW101 5092230 YP_001194572.1 CDS Fjoh_2225 NC_009441.1 2679688 2680773 R hypothetical protein complement(2679688..2680773) Flavobacterium johnsoniae UW101 5092231 YP_001194573.1 CDS Fjoh_2226 NC_009441.1 2680902 2682269 R PFAM: peptidase S41; peptidase S41 complement(2680902..2682269) Flavobacterium johnsoniae UW101 5092232 YP_001194574.1 CDS Fjoh_2227 NC_009441.1 2682330 2683616 R PFAM: protein of unknown function DUF58; hypothetical protein complement(2682330..2683616) Flavobacterium johnsoniae UW101 5092233 YP_001194575.1 CDS Fjoh_2228 NC_009441.1 2683684 2684295 R hypothetical protein complement(2683684..2684295) Flavobacterium johnsoniae UW101 5092234 YP_001194576.1 CDS Fjoh_2229 NC_009441.1 2684392 2685405 R PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase complement(2684392..2685405) Flavobacterium johnsoniae UW101 5092235 YP_001194577.1 CDS Fjoh_2230 NC_009441.1 2685441 2686646 R hypothetical protein complement(2685441..2686646) Flavobacterium johnsoniae UW101 5092236 YP_001194578.1 CDS Fjoh_2231 NC_009441.1 2686646 2687413 R hypothetical protein complement(2686646..2687413) Flavobacterium johnsoniae UW101 5092237 YP_001194579.1 CDS Fjoh_2232 NC_009441.1 2687432 2688406 R PFAM: protein of unknown function DUF95, transmembrane; hypothetical protein complement(2687432..2688406) Flavobacterium johnsoniae UW101 5092238 YP_001194580.1 CDS Fjoh_2233 NC_009441.1 2688427 2689170 D PFAM: RDD domain containing protein; RDD domain-containing protein 2688427..2689170 Flavobacterium johnsoniae UW101 5092239 YP_001194581.1 CDS Fjoh_2234 NC_009441.1 2689288 2690127 D hypothetical protein 2689288..2690127 Flavobacterium johnsoniae UW101 5092240 YP_001194582.1 CDS Fjoh_2235 NC_009441.1 2690214 2690816 D PFAM: protein of unknown function UPF0126; hypothetical protein 2690214..2690816 Flavobacterium johnsoniae UW101 5092241 YP_001194583.1 CDS Fjoh_2236 NC_009441.1 2690902 2691879 D hypothetical protein 2690902..2691879 Flavobacterium johnsoniae UW101 5092242 YP_001194584.1 CDS Fjoh_2237 NC_009441.1 2691892 2692992 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 2691892..2692992 Flavobacterium johnsoniae UW101 5092243 YP_001194585.1 CDS Fjoh_2238 NC_009441.1 2693008 2694324 D PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 2693008..2694324 Flavobacterium johnsoniae UW101 5092244 YP_001194586.1 CDS Fjoh_2239 NC_009441.1 2694348 2695703 D PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; short-chain dehydrogenase/reductase SDR; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 2694348..2695703 Flavobacterium johnsoniae UW101 5092245 YP_001194587.1 CDS Fjoh_2240 NC_009441.1 2695717 2697180 D PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2695717..2697180 Flavobacterium johnsoniae UW101 5092246 YP_001194588.1 CDS Fjoh_2241 NC_009441.1 2697177 2698082 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(2697177..2698082) Flavobacterium johnsoniae UW101 5092247 YP_001194589.1 CDS Fjoh_2242 NC_009441.1 2698172 2698564 D PFAM: WxcM domain protein, C-terminal domain protein; WxcM domain-containing protein 2698172..2698564 Flavobacterium johnsoniae UW101 5092248 YP_001194590.1 CDS Fjoh_2243 NC_009441.1 2698561 2699652 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2698561..2699652 Flavobacterium johnsoniae UW101 5092249 YP_001194591.1 CDS Fjoh_2244 NC_009441.1 2699649 2700530 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(2699649..2700530) Flavobacterium johnsoniae UW101 5092250 YP_001194592.1 CDS Fjoh_2245 NC_009441.1 2700530 2701279 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2700530..2701279) Flavobacterium johnsoniae UW101 5092251 YP_001194593.1 CDS Fjoh_2246 NC_009441.1 2701522 2704536 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide domain protein; hypothetical protein 2701522..2704536 Flavobacterium johnsoniae UW101 5092252 YP_001194594.1 CDS Fjoh_2247 NC_009441.1 2704621 2705484 D TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; PhzF family phenazine biosynthesis protein 2704621..2705484 Flavobacterium johnsoniae UW101 5092253 YP_001194595.1 CDS Fjoh_2248 NC_009441.1 2705597 2707354 D PFAM: TonB-dependent receptor; TonB-dependent receptor 2705597..2707354 Flavobacterium johnsoniae UW101 5092254 YP_001194596.1 CDS Fjoh_2249 NC_009441.1 2707486 2708016 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2707486..2708016 Flavobacterium johnsoniae UW101 5092255 YP_001194597.1 CDS Fjoh_2250 NC_009441.1 2708077 2708526 D hypothetical protein 2708077..2708526 Flavobacterium johnsoniae UW101 5092256 YP_001194598.1 CDS asnB NC_009441.1 2708930 2710606 D functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 2708930..2710606 Flavobacterium johnsoniae UW101 5092257 YP_001194599.1 CDS asnB NC_009441.1 2710921 2712534 D functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 2710921..2712534 Flavobacterium johnsoniae UW101 5092258 YP_001194600.1 CDS Fjoh_2253 NC_009441.1 2712737 2715475 D PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 2712737..2715475 Flavobacterium johnsoniae UW101 5092259 YP_001194601.1 CDS Fjoh_2254 NC_009441.1 2715776 2717716 D TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 2715776..2717716 Flavobacterium johnsoniae UW101 5092260 YP_001194602.1 CDS Fjoh_2255 NC_009441.1 2717825 2718760 D Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 2717825..2718760 Flavobacterium johnsoniae UW101 5092261 YP_001194603.1 CDS Fjoh_2256 NC_009441.1 2718989 2721964 D part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 2718989..2721964 Flavobacterium johnsoniae UW101 5094392 YP_001194604.1 CDS Fjoh_2257 NC_009441.1 2722050 2722661 D hypothetical protein 2722050..2722661 Flavobacterium johnsoniae UW101 5094393 YP_001194605.1 CDS Fjoh_2258 NC_009441.1 2722903 2723901 D hypothetical protein 2722903..2723901 Flavobacterium johnsoniae UW101 5094394 YP_001194606.1 CDS Fjoh_2259 NC_009441.1 2723949 2724812 D hypothetical protein 2723949..2724812 Flavobacterium johnsoniae UW101 5094395 YP_001194607.1 CDS Fjoh_2260 NC_009441.1 2724831 2725310 D hypothetical protein 2724831..2725310 Flavobacterium johnsoniae UW101 5094396 YP_001194608.1 CDS Fjoh_2261 NC_009441.1 2725328 2727691 D PFAM: peptidase M23B; peptidase M23B 2725328..2727691 Flavobacterium johnsoniae UW101 5094397 YP_001194609.1 CDS Fjoh_2262 NC_009441.1 2727678 2728871 D hypothetical protein 2727678..2728871 Flavobacterium johnsoniae UW101 5094398 YP_001194610.1 CDS Fjoh_2263 NC_009441.1 2729029 2730189 D hypothetical protein 2729029..2730189 Flavobacterium johnsoniae UW101 5094399 YP_001194611.1 CDS Fjoh_2264 NC_009441.1 2730193 2731362 D hypothetical protein 2730193..2731362 Flavobacterium johnsoniae UW101 5094400 YP_001194612.1 CDS Fjoh_2266 NC_009441.1 2732280 2733212 R PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(2732280..2733212) Flavobacterium johnsoniae UW101 5093570 YP_001194613.1 CDS Fjoh_2267 NC_009441.1 2733281 2733520 R PFAM: protein of unknown function DUF37; hypothetical protein complement(2733281..2733520) Flavobacterium johnsoniae UW101 5094402 YP_001194614.1 CDS cysS NC_009441.1 2733543 2735021 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2733543..2735021) Flavobacterium johnsoniae UW101 5094403 YP_001194615.1 CDS Fjoh_2269 NC_009441.1 2735080 2735469 R PFAM: S23 ribosomal protein; S23 ribosomal protein complement(2735080..2735469) Flavobacterium johnsoniae UW101 5094404 YP_001194616.1 CDS Fjoh_2270 NC_009441.1 2735506 2736177 R PFAM: GTP cyclohydrolase I; GTP cyclohydrolase I complement(2735506..2736177) Flavobacterium johnsoniae UW101 5094405 YP_001194617.1 CDS Fjoh_2271 NC_009441.1 2736364 2737560 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2736364..2737560) Flavobacterium johnsoniae UW101 5094406 YP_001194618.1 CDS Fjoh_2272 NC_009441.1 2737684 2739018 D SMART: PDZ/DHR/GLGF domain protein; PDZ/DHR/GLGF domain-containing protein 2737684..2739018 Flavobacterium johnsoniae UW101 5094407 YP_001194619.1 CDS Fjoh_2273 NC_009441.1 2739154 2741769 D hypothetical protein 2739154..2741769 Flavobacterium johnsoniae UW101 5094408 YP_001194620.1 CDS Fjoh_2274 NC_009441.1 2741804 2742730 D hypothetical protein 2741804..2742730 Flavobacterium johnsoniae UW101 5094409 YP_001194621.1 CDS Fjoh_2275 NC_009441.1 2742732 2744870 D PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; OmpA/MotB domain-containing protein 2742732..2744870 Flavobacterium johnsoniae UW101 5094410 YP_001194622.1 CDS Fjoh_2276 NC_009441.1 2745015 2745500 D hypothetical protein 2745015..2745500 Flavobacterium johnsoniae UW101 5094411 YP_001194623.1 CDS Fjoh_2277 NC_009441.1 2745591 2746007 R hypothetical protein complement(2745591..2746007) Flavobacterium johnsoniae UW101 5094412 YP_001194624.1 CDS valS NC_009441.1 2746260 2748893 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2746260..2748893 Flavobacterium johnsoniae UW101 5094413 YP_001194625.1 CDS Fjoh_2279 NC_009441.1 2749059 2750207 R PFAM: amino acid permease-associated region; amino acid permease complement(2749059..2750207) Flavobacterium johnsoniae UW101 5094414 YP_001194626.1 CDS Fjoh_2280 NC_009441.1 2750311 2752539 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor complement(2750311..2752539) Flavobacterium johnsoniae UW101 5094415 YP_001194627.1 CDS Fjoh_2281 NC_009441.1 2752776 2753501 R hypothetical protein complement(2752776..2753501) Flavobacterium johnsoniae UW101 5094416 YP_001194628.1 CDS Fjoh_2282 NC_009441.1 2753640 2756069 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor complement(2753640..2756069) Flavobacterium johnsoniae UW101 5094417 YP_001194629.1 CDS Fjoh_2283 NC_009441.1 2756174 2757322 R PFAM: PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein complement(2756174..2757322) Flavobacterium johnsoniae UW101 5094418 YP_001194630.1 CDS Fjoh_2284 NC_009441.1 2757409 2759712 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor complement(2757409..2759712) Flavobacterium johnsoniae UW101 5094419 YP_001194631.1 CDS Fjoh_2285 NC_009441.1 2759966 2761126 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 2759966..2761126 Flavobacterium johnsoniae UW101 5094420 YP_001194632.1 CDS Fjoh_2286 NC_009441.1 2761185 2761694 R hypothetical protein complement(2761185..2761694) Flavobacterium johnsoniae UW101 5094421 YP_001194633.1 CDS Fjoh_2287 NC_009441.1 2761758 2762483 R hypothetical protein complement(2761758..2762483) Flavobacterium johnsoniae UW101 5094422 YP_001194634.1 CDS Fjoh_2288 NC_009441.1 2762509 2762988 R hypothetical protein complement(2762509..2762988) Flavobacterium johnsoniae UW101 5094423 YP_001194635.1 CDS Fjoh_2289 NC_009441.1 2763305 2765611 R TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; DNA topoisomerase III complement(2763305..2765611) Flavobacterium johnsoniae UW101 5094424 YP_001194636.1 CDS Fjoh_2290 NC_009441.1 2765758 2767212 R hypothetical protein complement(2765758..2767212) Flavobacterium johnsoniae UW101 5094425 YP_001194637.1 CDS Fjoh_2291 NC_009441.1 2767519 2767665 R hypothetical protein complement(2767519..2767665) Flavobacterium johnsoniae UW101 5094426 YP_001194638.1 CDS Fjoh_2292 NC_009441.1 2767667 2768134 R hypothetical protein complement(2767667..2768134) Flavobacterium johnsoniae UW101 5094427 YP_001194639.1 CDS Fjoh_2293 NC_009441.1 2768219 2768473 R hypothetical protein complement(2768219..2768473) Flavobacterium johnsoniae UW101 5094428 YP_001194640.1 CDS Fjoh_2294 NC_009441.1 2768664 2769461 R TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; PhzF family phenazine biosynthesis protein complement(2768664..2769461) Flavobacterium johnsoniae UW101 5094429 YP_001194641.1 CDS Fjoh_2295 NC_009441.1 2769527 2770021 R hypothetical protein complement(2769527..2770021) Flavobacterium johnsoniae UW101 5094430 YP_001194642.1 CDS Fjoh_2296 NC_009441.1 2770024 2770554 R hypothetical protein complement(2770024..2770554) Flavobacterium johnsoniae UW101 5094431 YP_001194643.1 CDS Fjoh_2297 NC_009441.1 2770985 2771416 D PFAM: transcription elongation factor GreA/GreB domain protein; GreA/GreB family elongation factor 2770985..2771416 Flavobacterium johnsoniae UW101 5094432 YP_001194644.1 CDS Fjoh_2298 NC_009441.1 2771590 2772381 D hypothetical protein 2771590..2772381 Flavobacterium johnsoniae UW101 5094433 YP_001194645.1 CDS Fjoh_2299 NC_009441.1 2772402 2772605 R hypothetical protein complement(2772402..2772605) Flavobacterium johnsoniae UW101 5094434 YP_001194646.1 CDS Fjoh_2300 NC_009441.1 2772935 2773444 R hypothetical protein complement(2772935..2773444) Flavobacterium johnsoniae UW101 5094435 YP_001194647.1 CDS Fjoh_2301 NC_009441.1 2773559 2773891 R hypothetical protein complement(2773559..2773891) Flavobacterium johnsoniae UW101 5094436 YP_001194648.1 CDS Fjoh_2302 NC_009441.1 2774019 2774267 D hypothetical protein 2774019..2774267 Flavobacterium johnsoniae UW101 5094437 YP_001194649.1 CDS Fjoh_2303 NC_009441.1 2774428 2774724 R hypothetical protein complement(2774428..2774724) Flavobacterium johnsoniae UW101 5094438 YP_001194650.1 CDS Fjoh_2304 NC_009441.1 2774815 2775396 R hypothetical protein complement(2774815..2775396) Flavobacterium johnsoniae UW101 5094439 YP_001194651.1 CDS Fjoh_2305 NC_009441.1 2775649 2776086 R hypothetical protein complement(2775649..2776086) Flavobacterium johnsoniae UW101 5094440 YP_001194652.1 CDS Fjoh_2306 NC_009441.1 2776107 2776406 R hypothetical protein complement(2776107..2776406) Flavobacterium johnsoniae UW101 5094441 YP_001194653.1 CDS Fjoh_2307 NC_009441.1 2776407 2777033 R hypothetical protein complement(2776407..2777033) Flavobacterium johnsoniae UW101 5094442 YP_001194654.1 CDS Fjoh_2308 NC_009441.1 2777033 2777839 R PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein complement(2777033..2777839) Flavobacterium johnsoniae UW101 5094443 YP_001194655.1 CDS prfA NC_009441.1 2778076 2779152 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2778076..2779152 Flavobacterium johnsoniae UW101 5094444 YP_001194656.1 CDS Fjoh_2310 NC_009441.1 2779505 2780836 D hypothetical protein 2779505..2780836 Flavobacterium johnsoniae UW101 5094445 YP_001194657.1 CDS Fjoh_2311 NC_009441.1 2781326 2781712 R hypothetical protein complement(2781326..2781712) Flavobacterium johnsoniae UW101 5094446 YP_001194658.1 CDS Fjoh_2312 NC_009441.1 2781753 2782106 R hypothetical protein complement(2781753..2782106) Flavobacterium johnsoniae UW101 5090667 YP_001194659.1 CDS Fjoh_2313 NC_009441.1 2782146 2782430 R hypothetical protein complement(2782146..2782430) Flavobacterium johnsoniae UW101 5090668 YP_001194660.1 CDS Fjoh_2314 NC_009441.1 2782671 2783315 R hypothetical protein complement(2782671..2783315) Flavobacterium johnsoniae UW101 5090669 YP_001194661.1 CDS Fjoh_2315 NC_009441.1 2783364 2783939 R hypothetical protein complement(2783364..2783939) Flavobacterium johnsoniae UW101 5090670 YP_001194662.1 CDS Fjoh_2316 NC_009441.1 2784083 2785867 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; PAS fold-3 domain protein; multi-sensor signal transduction histidine kinase complement(2784083..2785867) Flavobacterium johnsoniae UW101 5090671 YP_001194663.1 CDS Fjoh_2317 NC_009441.1 2785884 2786333 R PFAM: response regulator receiver; response regulator receiver protein complement(2785884..2786333) Flavobacterium johnsoniae UW101 5090672 YP_001194664.1 CDS Fjoh_2318 NC_009441.1 2786355 2786906 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(2786355..2786906) Flavobacterium johnsoniae UW101 5090673 YP_001194665.1 CDS Fjoh_2319 NC_009441.1 2787069 2787254 R PFAM: CsbD family protein; CsbD family protein complement(2787069..2787254) Flavobacterium johnsoniae UW101 5090674 YP_001194666.1 CDS Fjoh_2320 NC_009441.1 2787366 2787839 R PFAM: Ferritin, Dps family protein; Dps family ferritin complement(2787366..2787839) Flavobacterium johnsoniae UW101 5090675 YP_001194667.1 CDS Fjoh_2321 NC_009441.1 2788000 2790183 D PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; OmpA/MotB domain-containing protein 2788000..2790183 Flavobacterium johnsoniae UW101 5090676 YP_001194668.1 CDS Fjoh_2322 NC_009441.1 2790296 2791117 D TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 2790296..2791117 Flavobacterium johnsoniae UW101 5090677 YP_001194669.1 CDS Fjoh_2323 NC_009441.1 2791240 2792040 D PFAM: periplasmic binding protein; periplasmic binding protein 2791240..2792040 Flavobacterium johnsoniae UW101 5090678 YP_001194670.1 CDS Fjoh_2324 NC_009441.1 2792037 2792957 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(2792037..2792957) Flavobacterium johnsoniae UW101 5090679 YP_001194671.1 CDS Fjoh_2325 NC_009441.1 2793027 2794037 R PFAM: aldo/keto reductase; aldo/keto reductase complement(2793027..2794037) Flavobacterium johnsoniae UW101 5090680 YP_001194672.1 CDS Fjoh_2326 NC_009441.1 2795152 2796006 R TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; formyltetrahydrofolate deformylase complement(2795152..2796006) Flavobacterium johnsoniae UW101 5090681 YP_001194673.1 CDS Fjoh_2327 NC_009441.1 2796107 2796826 R hypothetical protein complement(2796107..2796826) Flavobacterium johnsoniae UW101 5090682 YP_001194674.1 CDS Fjoh_2328 NC_009441.1 2796970 2797533 R hypothetical protein complement(2796970..2797533) Flavobacterium johnsoniae UW101 5090683 YP_001194675.1 CDS Fjoh_2329 NC_009441.1 2797566 2797982 R hypothetical protein complement(2797566..2797982) Flavobacterium johnsoniae UW101 5090684 YP_001194676.1 CDS Fjoh_2330 NC_009441.1 2798089 2798469 R hypothetical protein complement(2798089..2798469) Flavobacterium johnsoniae UW101 5090685 YP_001194677.1 CDS Fjoh_2331 NC_009441.1 2798581 2800140 R hypothetical protein complement(2798581..2800140) Flavobacterium johnsoniae UW101 5090686 YP_001194678.1 CDS Fjoh_2332 NC_009441.1 2800429 2803869 D PFAM: ArgK protein; methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase 2800429..2803869 Flavobacterium johnsoniae UW101 5090687 YP_001194679.1 CDS Fjoh_2333 NC_009441.1 2804401 2805918 D hypothetical protein 2804401..2805918 Flavobacterium johnsoniae UW101 5090688 YP_001194680.1 CDS Fjoh_2334 NC_009441.1 2806359 2806676 R hypothetical protein complement(2806359..2806676) Flavobacterium johnsoniae UW101 5090689 YP_001194681.1 CDS Fjoh_2335 NC_009441.1 2806879 2807286 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 2806879..2807286 Flavobacterium johnsoniae UW101 5090690 YP_001194682.1 CDS Fjoh_2336 NC_009441.1 2807619 2808005 R hypothetical protein complement(2807619..2808005) Flavobacterium johnsoniae UW101 5090691 YP_001194683.1 CDS Fjoh_2337 NC_009441.1 2808386 2808790 R hypothetical protein complement(2808386..2808790) Flavobacterium johnsoniae UW101 5090692 YP_001194684.1 CDS Fjoh_2338 NC_009441.1 2809222 2809575 R hypothetical protein complement(2809222..2809575) Flavobacterium johnsoniae UW101 5090693 YP_001194685.1 CDS Fjoh_2339 NC_009441.1 2810190 2810588 R hypothetical protein complement(2810190..2810588) Flavobacterium johnsoniae UW101 5090694 YP_001194686.1 CDS Fjoh_2340 NC_009441.1 2811038 2811910 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 2811038..2811910 Flavobacterium johnsoniae UW101 5090695 YP_001194687.1 CDS Fjoh_2341 NC_009441.1 2812126 2812995 D PFAM: esterase; esterase 2812126..2812995 Flavobacterium johnsoniae UW101 5090696 YP_001194688.1 CDS Fjoh_2342 NC_009441.1 2813087 2813605 D hypothetical protein 2813087..2813605 Flavobacterium johnsoniae UW101 5090697 YP_001194689.1 CDS Fjoh_2343 NC_009441.1 2813680 2814654 R PFAM: Integral membrane protein TerC; integral membrane protein TerC complement(2813680..2814654) Flavobacterium johnsoniae UW101 5090698 YP_001194690.1 CDS Fjoh_2344 NC_009441.1 2814885 2815901 R PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamate--ammonia ligase complement(2814885..2815901) Flavobacterium johnsoniae UW101 5090699 YP_001194691.1 CDS Fjoh_2345 NC_009441.1 2816329 2818518 D PFAM: glutamine synthetase, catalytic region; glutamine synthetase 2816329..2818518 Flavobacterium johnsoniae UW101 5090700 YP_001194692.1 CDS Fjoh_2346 NC_009441.1 2818913 2819758 D PFAM: Curlin associated repeat protein; curlin-associated protein 2818913..2819758 Flavobacterium johnsoniae UW101 5090701 YP_001194693.1 CDS Fjoh_2347 NC_009441.1 2819825 2820349 D hypothetical protein 2819825..2820349 Flavobacterium johnsoniae UW101 5090702 YP_001194694.1 CDS Fjoh_2348 NC_009441.1 2820358 2820768 D hypothetical protein 2820358..2820768 Flavobacterium johnsoniae UW101 5090703 YP_001194695.1 CDS Fjoh_2349 NC_009441.1 2820792 2821091 D hypothetical protein 2820792..2821091 Flavobacterium johnsoniae UW101 5090704 YP_001194696.1 CDS Fjoh_2350 NC_009441.1 2821108 2821512 D hypothetical protein 2821108..2821512 Flavobacterium johnsoniae UW101 5090705 YP_001194697.1 CDS Fjoh_2351 NC_009441.1 2821514 2822878 D PFAM: Curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 2821514..2822878 Flavobacterium johnsoniae UW101 5090706 YP_001194698.1 CDS Fjoh_2352 NC_009441.1 2822931 2824415 D PFAM: Fibronectin, type III domain protein; fibronectin, type III domain-containing protein 2822931..2824415 Flavobacterium johnsoniae UW101 5090707 YP_001194699.1 CDS Fjoh_2353 NC_009441.1 2824569 2825747 D PFAM: AIR synthase related protein domain protein; phosphoribosylformylglycinamidine cyclo-ligase 2824569..2825747 Flavobacterium johnsoniae UW101 5090708 YP_001194700.1 CDS Fjoh_2354 NC_009441.1 2825868 2826224 D hypothetical protein 2825868..2826224 Flavobacterium johnsoniae UW101 5090709 YP_001194701.1 CDS Fjoh_2355 NC_009441.1 2826257 2826877 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2826257..2826877 Flavobacterium johnsoniae UW101 5090710 YP_001194702.1 CDS Fjoh_2356 NC_009441.1 2826895 2827518 R hypothetical protein complement(2826895..2827518) Flavobacterium johnsoniae UW101 5090711 YP_001194703.1 CDS Fjoh_2357 NC_009441.1 2827583 2828035 R hypothetical protein complement(2827583..2828035) Flavobacterium johnsoniae UW101 5090712 YP_001194704.1 CDS Fjoh_2358 NC_009441.1 2828173 2830509 D TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; alpha-1,2-mannosidase 2828173..2830509 Flavobacterium johnsoniae UW101 5090713 YP_001194705.1 CDS Fjoh_2359 NC_009441.1 2830700 2831143 D hypothetical protein 2830700..2831143 Flavobacterium johnsoniae UW101 5090714 YP_001194706.1 CDS Fjoh_2360 NC_009441.1 2831300 2833153 R PFAM: peptidase M61 domain protein; peptidase M61 domain-containing protein complement(2831300..2833153) Flavobacterium johnsoniae UW101 5090715 YP_001194707.1 CDS Fjoh_2361 NC_009441.1 2833254 2833532 R hypothetical protein complement(2833254..2833532) Flavobacterium johnsoniae UW101 5090716 YP_001194708.1 CDS Fjoh_2362 NC_009441.1 2833646 2834482 R sterol desaturase-like protein complement(2833646..2834482) Flavobacterium johnsoniae UW101 5090717 YP_001194709.1 CDS Fjoh_2363 NC_009441.1 2834603 2834845 R hypothetical protein complement(2834603..2834845) Flavobacterium johnsoniae UW101 5090718 YP_001194710.1 CDS Fjoh_2364 NC_009441.1 2834864 2835580 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; MIP family channel protein complement(2834864..2835580) Flavobacterium johnsoniae UW101 5090719 YP_001194711.1 CDS Fjoh_2365 NC_009441.1 2835614 2835970 R hypothetical protein complement(2835614..2835970) Flavobacterium johnsoniae UW101 5090720 YP_001194712.1 CDS Fjoh_2366 NC_009441.1 2836058 2836954 R PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein complement(2836058..2836954) Flavobacterium johnsoniae UW101 5090721 YP_001194713.1 CDS Fjoh_2367 NC_009441.1 2837157 2838275 R PFAM: peptidylprolyl isomerase, FKBP-type; peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(2837157..2838275) Flavobacterium johnsoniae UW101 5090722 YP_001194714.1 CDS Fjoh_2368 NC_009441.1 2838323 2839396 R PFAM: peptidylprolyl isomerase, FKBP-type; peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(2838323..2839396) Flavobacterium johnsoniae UW101 5092100 YP_001194715.1 CDS Fjoh_2369 NC_009441.1 2839412 2840068 R PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidyl-prolyl cis-trans isomerase complement(2839412..2840068) Flavobacterium johnsoniae UW101 5092101 YP_001194716.1 CDS Fjoh_2370 NC_009441.1 2840076 2841080 R PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; phosphoesterase domain-containing protein complement(2840076..2841080) Flavobacterium johnsoniae UW101 5092102 YP_001194717.1 CDS Fjoh_2371 NC_009441.1 2841195 2842451 R PFAM: Cl- channel, voltage-gated family protein; Cl- channel, voltage-gated family protein complement(2841195..2842451) Flavobacterium johnsoniae UW101 5092103 YP_001194718.1 CDS Fjoh_2372 NC_009441.1 2842547 2842930 R PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(2842547..2842930) Flavobacterium johnsoniae UW101 5092104 YP_001194719.1 CDS Fjoh_2373 NC_009441.1 2843085 2843390 R hypothetical protein complement(2843085..2843390) Flavobacterium johnsoniae UW101 5092105 YP_001194720.1 CDS Fjoh_2374 NC_009441.1 2843383 2844303 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein complement(2843383..2844303) Flavobacterium johnsoniae UW101 5092106 YP_001194721.1 CDS Fjoh_2375 NC_009441.1 2844591 2845298 D hypothetical protein 2844591..2845298 Flavobacterium johnsoniae UW101 5092107 YP_001194722.1 CDS Fjoh_2376 NC_009441.1 2845435 2845962 R hypothetical protein complement(2845435..2845962) Flavobacterium johnsoniae UW101 5092108 YP_001194723.1 CDS guaA NC_009441.1 2846242 2847771 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2846242..2847771 Flavobacterium johnsoniae UW101 5092109 YP_001194724.1 CDS Fjoh_2378 NC_009441.1 2847835 2849739 D PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 2847835..2849739 Flavobacterium johnsoniae UW101 5092110 YP_001194725.1 CDS Fjoh_2379 NC_009441.1 2849834 2851930 D PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 2849834..2851930 Flavobacterium johnsoniae UW101 5092111 YP_001194726.1 CDS Fjoh_2380 NC_009441.1 2851930 2852331 D PFAM: OsmC family protein; OsmC family protein 2851930..2852331 Flavobacterium johnsoniae UW101 5092112 YP_001194727.1 CDS Fjoh_2381 NC_009441.1 2852757 2854685 D TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate deaminase 2852757..2854685 Flavobacterium johnsoniae UW101 5092113 YP_001194728.1 CDS Fjoh_2382 NC_009441.1 2854893 2855129 D hypothetical protein 2854893..2855129 Flavobacterium johnsoniae UW101 5092114 YP_001194729.1 CDS pyrG NC_009441.1 2855557 2857170 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2855557..2857170 Flavobacterium johnsoniae UW101 5092115 YP_001194730.1 CDS Fjoh_2384 NC_009441.1 2857254 2859164 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 2857254..2859164 Flavobacterium johnsoniae UW101 5092116 YP_001194731.1 CDS Fjoh_2385 NC_009441.1 2859314 2860033 D hypothetical protein 2859314..2860033 Flavobacterium johnsoniae UW101 5092117 YP_001194732.1 CDS Fjoh_2386 NC_009441.1 2860161 2860718 D hypothetical protein 2860161..2860718 Flavobacterium johnsoniae UW101 5092118 YP_001194733.1 CDS Fjoh_2387 NC_009441.1 2861026 2862903 R PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; pyruvate phosphate dikinase complement(2861026..2862903) Flavobacterium johnsoniae UW101 5092119 YP_001194734.1 CDS mnmA NC_009441.1 2863044 2864231 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2863044..2864231 Flavobacterium johnsoniae UW101 5092120 YP_001194735.1 CDS Fjoh_2389 NC_009441.1 2864273 2865874 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 2864273..2865874 Flavobacterium johnsoniae UW101 5092121 YP_001194736.1 CDS Fjoh_2390 NC_009441.1 2865883 2866827 D PFAM: 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 2865883..2866827 Flavobacterium johnsoniae UW101 5092122 YP_001194737.1 CDS Fjoh_2391 NC_009441.1 2866847 2867257 D hypothetical protein 2866847..2867257 Flavobacterium johnsoniae UW101 5092123 YP_001194738.1 CDS Fjoh_2392 NC_009441.1 2867338 2867778 R hypothetical protein complement(2867338..2867778) Flavobacterium johnsoniae UW101 5092124 YP_001194739.1 CDS Fjoh_2393 NC_009441.1 2867869 2868519 D PFAM: NUDIX hydrolase; NUDIX hydrolase 2867869..2868519 Flavobacterium johnsoniae UW101 5092125 YP_001194740.1 CDS Fjoh_2394 NC_009441.1 2868647 2869456 D PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2868647..2869456 Flavobacterium johnsoniae UW101 5092126 YP_001194741.1 CDS Fjoh_2395 NC_009441.1 2869557 2870189 R hypothetical protein complement(2869557..2870189) Flavobacterium johnsoniae UW101 5092127 YP_001194742.1 CDS Fjoh_2396 NC_009441.1 2870198 2870692 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(2870198..2870692) Flavobacterium johnsoniae UW101 5092128 YP_001194743.1 CDS Fjoh_2397 NC_009441.1 2870834 2871895 R hypothetical protein complement(2870834..2871895) Flavobacterium johnsoniae UW101 5092129 YP_001194744.1 CDS Fjoh_2398 NC_009441.1 2871938 2872183 D hypothetical protein 2871938..2872183 Flavobacterium johnsoniae UW101 5092130 YP_001194745.1 CDS Fjoh_2399 NC_009441.1 2872189 2872482 D PFAM: plasmid stabilization system; plasmid stabilization system protein 2872189..2872482 Flavobacterium johnsoniae UW101 5092131 YP_001194746.1 CDS Fjoh_2400 NC_009441.1 2872647 2874107 D TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase 2872647..2874107 Flavobacterium johnsoniae UW101 5092132 YP_001194747.1 CDS Fjoh_2401 NC_009441.1 2874418 2875191 R hypothetical protein complement(2874418..2875191) Flavobacterium johnsoniae UW101 5092133 YP_001194748.1 CDS Fjoh_2402 NC_009441.1 2875443 2877347 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase complement(2875443..2877347) Flavobacterium johnsoniae UW101 5092134 YP_001194749.1 CDS Fjoh_2403 NC_009441.1 2877552 2878130 R hydrolyzes non-standard nucleotides such as xanthine and inosine; deoxyribonucleoside-triphosphatase complement(2877552..2878130) Flavobacterium johnsoniae UW101 5092135 YP_001194750.1 CDS Fjoh_2404 NC_009441.1 2878207 2879985 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2878207..2879985 Flavobacterium johnsoniae UW101 5092136 YP_001194751.1 CDS Fjoh_2405 NC_009441.1 2879966 2880367 R hypothetical protein complement(2879966..2880367) Flavobacterium johnsoniae UW101 5092137 YP_001194752.2 CDS Fjoh_2406 NC_009441.1 2880564 2881742 D PFAM: glycosyl hydrolase, family 88; glycosyl hydrolase 2880564..2881742 Flavobacterium johnsoniae UW101 5092138 YP_001194753.1 CDS Fjoh_2407 NC_009441.1 2881749 2882156 D hypothetical protein 2881749..2882156 Flavobacterium johnsoniae UW101 5092139 YP_001194754.1 CDS Fjoh_2408 NC_009441.1 2882370 2882804 D hypothetical protein 2882370..2882804 Flavobacterium johnsoniae UW101 5092140 YP_001194755.1 CDS Fjoh_2409 NC_009441.1 2882858 2884372 R PFAM: ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase complement(2882858..2884372) Flavobacterium johnsoniae UW101 5092141 YP_001194756.1 CDS Fjoh_2410 NC_009441.1 2884404 2885183 R hypothetical protein complement(2884404..2885183) Flavobacterium johnsoniae UW101 5092142 YP_001194757.1 CDS Fjoh_2411 NC_009441.1 2885386 2885835 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 2885386..2885835 Flavobacterium johnsoniae UW101 5092143 YP_001194758.1 CDS Fjoh_2412 NC_009441.1 2885857 2886378 D PFAM: blue (type 1) copper domain protein; blue (type1) copper domain-containing protein 2885857..2886378 Flavobacterium johnsoniae UW101 5092144 YP_001194759.1 CDS Fjoh_2413 NC_009441.1 2886477 2888711 D nitric oxide reductase large subunit-like protein 2886477..2888711 Flavobacterium johnsoniae UW101 5092145 YP_001194760.1 CDS Fjoh_2414 NC_009441.1 2888735 2889466 D PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein 2888735..2889466 Flavobacterium johnsoniae UW101 5092146 YP_001194761.1 CDS Fjoh_2415 NC_009441.1 2889709 2890959 D hypothetical protein 2889709..2890959 Flavobacterium johnsoniae UW101 5092147 YP_001194762.1 CDS Fjoh_2416 NC_009441.1 2891053 2891652 R PFAM: electron transport protein SCO1/SenC; electron transport protein SCO1/SenC complement(2891053..2891652) Flavobacterium johnsoniae UW101 5092148 YP_001194763.1 CDS Fjoh_2417 NC_009441.1 2891670 2892446 R PFAM: protein of unknown function DUF323; hypothetical protein complement(2891670..2892446) Flavobacterium johnsoniae UW101 5092149 YP_001194764.1 CDS Fjoh_2418 NC_009441.1 2892462 2893901 R TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase, type 1; cytochrome c, class I; multicopper oxidase, type 3; nitrite reductase complement(2892462..2893901) Flavobacterium johnsoniae UW101 5092150 YP_001194765.1 CDS Fjoh_2419 NC_009441.1 2894165 2895424 D PFAM: aminotransferase, class I and II; 8-amino-7-oxononanoate synthase 2894165..2895424 Flavobacterium johnsoniae UW101 5092151 YP_001194766.1 CDS Fjoh_2420 NC_009441.1 2895542 2896024 D hypothetical protein 2895542..2896024 Flavobacterium johnsoniae UW101 5092152 YP_001194767.1 CDS Fjoh_2421 NC_009441.1 2896132 2897250 R hypothetical protein complement(2896132..2897250) Flavobacterium johnsoniae UW101 5092153 YP_001194768.1 CDS Fjoh_2422 NC_009441.1 2897296 2898264 R hypothetical protein complement(2897296..2898264) Flavobacterium johnsoniae UW101 5092154 YP_001194769.1 CDS Fjoh_2423 NC_009441.1 2898368 2898676 D hypothetical protein 2898368..2898676 Flavobacterium johnsoniae UW101 5090280 YP_001194770.1 CDS Fjoh_2424 NC_009441.1 2898728 2901166 D hypothetical protein 2898728..2901166 Flavobacterium johnsoniae UW101 5090281 YP_001194771.1 CDS Fjoh_2425 NC_009441.1 2901206 2902489 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2901206..2902489 Flavobacterium johnsoniae UW101 5090282 YP_001194772.1 CDS Fjoh_2426 NC_009441.1 2902567 2904036 D PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2902567..2904036 Flavobacterium johnsoniae UW101 5090283 YP_001194773.1 CDS Fjoh_2427 NC_009441.1 2904131 2905783 D PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS 2904131..2905783 Flavobacterium johnsoniae UW101 5090284 YP_001194774.1 CDS Fjoh_2428 NC_009441.1 2906078 2906326 D hypothetical protein 2906078..2906326 Flavobacterium johnsoniae UW101 5090285 YP_001194775.1 CDS Fjoh_2429 NC_009441.1 2906452 2909247 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A complement(2906452..2909247) Flavobacterium johnsoniae UW101 5090286 YP_001194776.1 CDS Fjoh_2430 NC_009441.1 2909489 2912245 D PFAM: Two component regulator three Y domain protein; SMART: regulatory protein, LuxR; periplasmic ligand-binding sensor protein 2909489..2912245 Flavobacterium johnsoniae UW101 5090287 YP_001194777.1 CDS Fjoh_2431 NC_009441.1 2912487 2915522 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 2912487..2915522 Flavobacterium johnsoniae UW101 5090288 YP_001194778.1 CDS Fjoh_2432 NC_009441.1 2915534 2917033 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2915534..2917033 Flavobacterium johnsoniae UW101 5090289 YP_001194779.1 CDS Fjoh_2433 NC_009441.1 2917046 2918647 D hypothetical protein 2917046..2918647 Flavobacterium johnsoniae UW101 5090290 YP_001194780.1 CDS Fjoh_2434 NC_009441.1 2918659 2920329 D PFAM: glycoside hydrolase, family 16; glycoside hydrolase 2918659..2920329 Flavobacterium johnsoniae UW101 5090291 YP_001194781.1 CDS Fjoh_2435 NC_009441.1 2920398 2921156 D PFAM: glycoside hydrolase, family 16; glucan endo-1,3-beta-D-glucosidase 2920398..2921156 Flavobacterium johnsoniae UW101 5090292 YP_001194782.1 CDS Fjoh_2436 NC_009441.1 2921477 2922061 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 2921477..2922061 Flavobacterium johnsoniae UW101 5090293 YP_001194783.1 CDS Fjoh_2437 NC_009441.1 2922713 2923777 D PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2922713..2923777 Flavobacterium johnsoniae UW101 5090294 YP_001194784.1 CDS Fjoh_2438 NC_009441.1 2923793 2924449 R PFAM: HhH-GPD family protein; DNA-(apurinic or apyrimidinic site) lyase complement(2923793..2924449) Flavobacterium johnsoniae UW101 5090295 YP_001194785.1 CDS Fjoh_2439 NC_009441.1 2924517 2925071 D hypothetical protein 2924517..2925071 Flavobacterium johnsoniae UW101 5090296 YP_001194786.1 CDS Fjoh_2440 NC_009441.1 2925112 2925564 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase 2925112..2925564 Flavobacterium johnsoniae UW101 5090297 YP_001194787.1 CDS Fjoh_2441 NC_009441.1 2925833 2927293 R hypothetical protein complement(2925833..2927293) Flavobacterium johnsoniae UW101 5090298 YP_001194788.1 CDS Fjoh_2442 NC_009441.1 2927383 2928147 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 2927383..2928147 Flavobacterium johnsoniae UW101 5090299 YP_001194789.1 CDS Fjoh_2443 NC_009441.1 2928161 2928664 D hypothetical protein 2928161..2928664 Flavobacterium johnsoniae UW101 5090300 YP_001194790.1 CDS Fjoh_2444 NC_009441.1 2928721 2929134 D hypothetical protein 2928721..2929134 Flavobacterium johnsoniae UW101 5090301 YP_001194791.1 CDS Fjoh_2445 NC_009441.1 2929193 2929702 R hypothetical protein complement(2929193..2929702) Flavobacterium johnsoniae UW101 5090302 YP_001194792.1 CDS Fjoh_2446 NC_009441.1 2929857 2930456 R hypothetical protein complement(2929857..2930456) Flavobacterium johnsoniae UW101 5090303 YP_001194793.1 CDS Fjoh_2447 NC_009441.1 2930563 2931207 R PFAM: phospholipase/Carboxylesterase; phospholipase/carboxylesterase complement(2930563..2931207) Flavobacterium johnsoniae UW101 5090304 YP_001194794.1 CDS Fjoh_2448 NC_009441.1 2931451 2931777 R hypothetical protein complement(2931451..2931777) Flavobacterium johnsoniae UW101 5090305 YP_001194795.1 CDS Fjoh_2449 NC_009441.1 2931782 2933032 R PFAM: amidohydrolase; amidohydrolase complement(2931782..2933032) Flavobacterium johnsoniae UW101 5090306 YP_001194796.1 CDS Fjoh_2450 NC_009441.1 2933179 2935101 R TIGRFAM: conserved hypothetical membrane protein; PFAM: protein of unknown function DUF1550; hypothetical protein complement(2933179..2935101) Flavobacterium johnsoniae UW101 5090307 YP_001194797.1 CDS Fjoh_2451 NC_009441.1 2935354 2936466 D 6-phosphogluconolactonase 2935354..2936466 Flavobacterium johnsoniae UW101 5090308 YP_001194798.1 CDS Fjoh_2452 NC_009441.1 2936585 2937937 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase complement(2936585..2937937) Flavobacterium johnsoniae UW101 5090309 YP_001194799.1 CDS Fjoh_2453 NC_009441.1 2938040 2938804 R hypothetical protein complement(2938040..2938804) Flavobacterium johnsoniae UW101 5090310 YP_001194800.1 CDS Fjoh_2454 NC_009441.1 2938819 2939697 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2938819..2939697) Flavobacterium johnsoniae UW101 5090311 YP_001194801.1 CDS Fjoh_2455 NC_009441.1 2939927 2940226 D hypothetical protein 2939927..2940226 Flavobacterium johnsoniae UW101 5090312 YP_001194802.2 CDS Fjoh_2456 NC_009441.1 2940278 2943037 R pectate lyase-like protein complement(2940278..2943037) Flavobacterium johnsoniae UW101 5090313 YP_001194803.1 CDS Fjoh_2457 NC_009441.1 2943441 2943758 R hypothetical protein complement(2943441..2943758) Flavobacterium johnsoniae UW101 5090314 YP_001194804.1 CDS Fjoh_2458 NC_009441.1 2943790 2944224 R hypothetical protein complement(2943790..2944224) Flavobacterium johnsoniae UW101 5090315 YP_001194805.1 CDS Fjoh_2459 NC_009441.1 2944416 2944979 R hypothetical protein complement(2944416..2944979) Flavobacterium johnsoniae UW101 5090316 YP_001194806.1 CDS Fjoh_2460 NC_009441.1 2945161 2945487 R hypothetical protein complement(2945161..2945487) Flavobacterium johnsoniae UW101 5090317 YP_001194807.1 CDS Fjoh_2461 NC_009441.1 2945587 2946537 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase complement(2945587..2946537) Flavobacterium johnsoniae UW101 5090318 YP_001194808.1 CDS Fjoh_2462 NC_009441.1 2946783 2947853 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(2946783..2947853) Flavobacterium johnsoniae UW101 5090319 YP_001194809.1 CDS Fjoh_2463 NC_009441.1 2947959 2949023 R hypothetical protein complement(2947959..2949023) Flavobacterium johnsoniae UW101 5090320 YP_001194810.1 CDS Fjoh_2464 NC_009441.1 2949173 2949523 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2949173..2949523 Flavobacterium johnsoniae UW101 5090321 YP_001194811.1 CDS Fjoh_2465 NC_009441.1 2949693 2950853 D hypothetical protein 2949693..2950853 Flavobacterium johnsoniae UW101 5090322 YP_001194812.1 CDS Fjoh_2466 NC_009441.1 2950996 2953659 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(2950996..2953659) Flavobacterium johnsoniae UW101 5090323 YP_001194813.1 CDS Fjoh_2467 NC_009441.1 2953954 2955048 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2953954..2955048 Flavobacterium johnsoniae UW101 5090324 YP_001194814.1 CDS Fjoh_2468 NC_009441.1 2955386 2956063 D hypothetical protein 2955386..2956063 Flavobacterium johnsoniae UW101 5090325 YP_001194815.1 CDS Fjoh_2469 NC_009441.1 2956334 2957251 D TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; ribonuclease BN 2956334..2957251 Flavobacterium johnsoniae UW101 5090326 YP_001194816.1 CDS Fjoh_2470 NC_009441.1 2957318 2957842 D PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2957318..2957842 Flavobacterium johnsoniae UW101 5090327 YP_001194817.1 CDS Fjoh_2471 NC_009441.1 2957843 2958823 D SMART: transglutaminase domain protein; transglutaminase domain-containing protein 2957843..2958823 Flavobacterium johnsoniae UW101 5090328 YP_001194818.1 CDS Fjoh_2472 NC_009441.1 2958902 2960077 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 2958902..2960077 Flavobacterium johnsoniae UW101 5090329 YP_001194819.1 CDS Fjoh_2473 NC_009441.1 2960241 2962109 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2960241..2962109 Flavobacterium johnsoniae UW101 5090330 YP_001194820.1 CDS Fjoh_2474 NC_009441.1 2962125 2962748 D hypothetical protein 2962125..2962748 Flavobacterium johnsoniae UW101 5090331 YP_001194821.1 CDS Fjoh_2475 NC_009441.1 2962784 2965504 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2962784..2965504 Flavobacterium johnsoniae UW101 5090332 YP_001194822.1 CDS Fjoh_2476 NC_009441.1 2965657 2965983 D hypothetical protein 2965657..2965983 Flavobacterium johnsoniae UW101 5090333 YP_001194823.1 CDS Fjoh_2477 NC_009441.1 2966039 2967823 R PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase complement(2966039..2967823) Flavobacterium johnsoniae UW101 5090334 YP_001194824.1 CDS Fjoh_2478 NC_009441.1 2967890 2969371 R hypothetical protein complement(2967890..2969371) Flavobacterium johnsoniae UW101 5091932 YP_001194825.1 CDS Fjoh_2479 NC_009441.1 2969529 2970158 R TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon complement(2969529..2970158) Flavobacterium johnsoniae UW101 5091933 YP_001194826.1 CDS Fjoh_2480 NC_009441.1 2970160 2972079 R PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase; hypothetical protein complement(2970160..2972079) Flavobacterium johnsoniae UW101 5091934 YP_001194827.1 CDS Fjoh_2481 NC_009441.1 2972264 2972668 R hypothetical protein complement(2972264..2972668) Flavobacterium johnsoniae UW101 5091935 YP_001194828.1 CDS Fjoh_2482 NC_009441.1 2972665 2973240 R PFAM: protein of unknown function DUF1572; hypothetical protein complement(2972665..2973240) Flavobacterium johnsoniae UW101 5091936 YP_001194829.1 CDS Fjoh_2483 NC_009441.1 2973253 2973603 R PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator complement(2973253..2973603) Flavobacterium johnsoniae UW101 5091937 YP_001194830.1 CDS Fjoh_2484 NC_009441.1 2973703 2974341 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase 2973703..2974341 Flavobacterium johnsoniae UW101 5091938 YP_001194831.1 CDS Fjoh_2485 NC_009441.1 2974338 2975141 D DNA alkylation repair enzyme-like protein 2974338..2975141 Flavobacterium johnsoniae UW101 5091939 YP_001194832.1 CDS Fjoh_2486 NC_009441.1 2975164 2975736 R PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein complement(2975164..2975736) Flavobacterium johnsoniae UW101 5091940 YP_001194833.1 CDS Fjoh_2487 NC_009441.1 2975724 2976038 R PFAM: plasmid stabilization system; plasmid stabilization system protein complement(2975724..2976038) Flavobacterium johnsoniae UW101 5091941 YP_001194834.1 CDS Fjoh_2488 NC_009441.1 2976023 2976253 R hypothetical protein complement(2976023..2976253) Flavobacterium johnsoniae UW101 5091942 YP_001194835.1 CDS Fjoh_2489 NC_009441.1 2976281 2976502 R hypothetical protein complement(2976281..2976502) Flavobacterium johnsoniae UW101 5091943 YP_001194836.1 CDS murQ NC_009441.1 2976640 2977452 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase complement(2976640..2977452) Flavobacterium johnsoniae UW101 5091944 YP_001194837.1 CDS Fjoh_2491 NC_009441.1 2977620 2978759 D PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver protein 2977620..2978759 Flavobacterium johnsoniae UW101 5091945 YP_001194838.1 CDS Fjoh_2492 NC_009441.1 2978915 2981302 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 2978915..2981302 Flavobacterium johnsoniae UW101 5091946 YP_001194839.1 CDS Fjoh_2493 NC_009441.1 2981518 2982186 R hypothetical protein complement(2981518..2982186) Flavobacterium johnsoniae UW101 5091947 YP_001194840.1 CDS Fjoh_2494 NC_009441.1 2982282 2983046 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(2982282..2983046) Flavobacterium johnsoniae UW101 5091948 YP_001194841.1 CDS Fjoh_2495 NC_009441.1 2983161 2984324 D PFAM: RNA methylase; THUMP domain protein; RNA methylase 2983161..2984324 Flavobacterium johnsoniae UW101 5091949 YP_001194842.1 CDS Fjoh_2496 NC_009441.1 2984489 2984725 D hypothetical protein 2984489..2984725 Flavobacterium johnsoniae UW101 5091950 YP_001194843.1 CDS Fjoh_2497 NC_009441.1 2984744 2985436 D TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; aspartate racemase 2984744..2985436 Flavobacterium johnsoniae UW101 5091951 YP_001194844.1 CDS Fjoh_2498 NC_009441.1 2985489 2986313 R hypothetical protein complement(2985489..2986313) Flavobacterium johnsoniae UW101 5091952 YP_001194845.1 CDS Fjoh_2499 NC_009441.1 2986285 2986833 R hypothetical protein complement(2986285..2986833) Flavobacterium johnsoniae UW101 5091953 YP_001194846.1 CDS Fjoh_2500 NC_009441.1 2986848 2988260 R TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; RNA methyltransferase complement(2986848..2988260) Flavobacterium johnsoniae UW101 5091954 YP_001194847.1 CDS Fjoh_2501 NC_009441.1 2988419 2989471 D PFAM: ATP-binding region, ATPase domain protein domain protein; integral membrane sensor signal transduction histidine kinase 2988419..2989471 Flavobacterium johnsoniae UW101 5091955 YP_001194848.1 CDS Fjoh_2502 NC_009441.1 2989548 2989949 R hypothetical protein complement(2989548..2989949) Flavobacterium johnsoniae UW101 5091956 YP_001194849.1 CDS Fjoh_2503 NC_009441.1 2990091 2991077 R PFAM: aldo/keto reductase; aldo/keto reductase complement(2990091..2991077) Flavobacterium johnsoniae UW101 5091957 YP_001194850.1 CDS cysM NC_009441.1 2991222 2992109 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(2991222..2992109) Flavobacterium johnsoniae UW101 5091958 YP_001194851.1 CDS Fjoh_2505 NC_009441.1 2992111 2992902 R Serine O-acetyltransferase complement(2992111..2992902) Flavobacterium johnsoniae UW101 5091959 YP_001194852.1 CDS Fjoh_2506 NC_009441.1 2993093 2993794 D PFAM: protein of unknown function DUF1003; hypothetical protein 2993093..2993794 Flavobacterium johnsoniae UW101 5091960 YP_001194853.1 CDS Fjoh_2507 NC_009441.1 2993811 2994095 R hypothetical protein complement(2993811..2994095) Flavobacterium johnsoniae UW101 5091961 YP_001194854.1 CDS Fjoh_2508 NC_009441.1 2994201 2994386 D hypothetical protein 2994201..2994386 Flavobacterium johnsoniae UW101 5091962 YP_001194855.1 CDS Fjoh_2509 NC_009441.1 2994376 2994927 D hypothetical protein 2994376..2994927 Flavobacterium johnsoniae UW101 5091963 YP_001194856.1 CDS Fjoh_2510 NC_009441.1 2995068 2996075 R hypothetical protein complement(2995068..2996075) Flavobacterium johnsoniae UW101 5091964 YP_001194857.1 CDS Fjoh_2511 NC_009441.1 2996117 2997286 D PFAM: aminotransferase, class V; class V aminotransferase 2996117..2997286 Flavobacterium johnsoniae UW101 5091965 YP_001194858.1 CDS Fjoh_2512 NC_009441.1 2997374 2997943 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; Sua5/YciO/YrdC/YwlC family protein complement(2997374..2997943) Flavobacterium johnsoniae UW101 5091966 YP_001194859.1 CDS Fjoh_2513 NC_009441.1 2998182 2999315 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2998182..2999315 Flavobacterium johnsoniae UW101 5091967 YP_001194860.1 CDS Fjoh_2514 NC_009441.1 2999322 3000248 D hypothetical protein 2999322..3000248 Flavobacterium johnsoniae UW101 5091968 YP_001194861.1 CDS Fjoh_2515 NC_009441.1 3000256 3001077 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3000256..3001077 Flavobacterium johnsoniae UW101 5091969 YP_001194862.1 CDS Fjoh_2516 NC_009441.1 3001096 3001965 D hypothetical protein 3001096..3001965 Flavobacterium johnsoniae UW101 5091970 YP_001194863.1 CDS Fjoh_2517 NC_009441.1 3001966 3003036 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3001966..3003036) Flavobacterium johnsoniae UW101 5091971 YP_001194864.1 CDS Fjoh_2518 NC_009441.1 3003122 3003889 D hypothetical protein 3003122..3003889 Flavobacterium johnsoniae UW101 5091972 YP_001194865.1 CDS Fjoh_2519 NC_009441.1 3003870 3004643 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3003870..3004643) Flavobacterium johnsoniae UW101 5091973 YP_001194866.1 CDS Fjoh_2520 NC_009441.1 3004662 3005726 R PFAM: glycosyl transferase, family 9; glycosyl transferase family protein complement(3004662..3005726) Flavobacterium johnsoniae UW101 5091974 YP_001194867.1 CDS Fjoh_2521 NC_009441.1 3005851 3006600 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3005851..3006600 Flavobacterium johnsoniae UW101 5091975 YP_001194868.1 CDS Fjoh_2522 NC_009441.1 3006870 3007583 D PFAM: polysaccharide deacetylase; polysaccharide deacetylase 3006870..3007583 Flavobacterium johnsoniae UW101 5091976 YP_001194869.1 CDS Fjoh_2523 NC_009441.1 3007591 3008340 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3007591..3008340 Flavobacterium johnsoniae UW101 5091977 YP_001194870.1 CDS dapD NC_009441.1 3008393 3009208 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(3008393..3009208) Flavobacterium johnsoniae UW101 5091978 YP_001194871.1 CDS Fjoh_2525 NC_009441.1 3009488 3010114 D TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS/PAC sensor protein 3009488..3010114 Flavobacterium johnsoniae UW101 5091979 YP_001194872.1 CDS Fjoh_2526 NC_009441.1 3010286 3010531 D hypothetical protein 3010286..3010531 Flavobacterium johnsoniae UW101 5091980 YP_001194873.1 CDS Fjoh_2527 NC_009441.1 3010548 3010802 D hypothetical protein 3010548..3010802 Flavobacterium johnsoniae UW101 5091981 YP_001194874.1 CDS Fjoh_2528 NC_009441.1 3010826 3011242 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3010826..3011242 Flavobacterium johnsoniae UW101 5091982 YP_001194875.1 CDS Fjoh_2529 NC_009441.1 3011368 3012861 D malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 3011368..3012861 Flavobacterium johnsoniae UW101 5091983 YP_001194876.1 CDS Fjoh_2530 NC_009441.1 3012944 3013516 D PFAM: isochorismatase hydrolase; isochorismatase hydrolase 3012944..3013516 Flavobacterium johnsoniae UW101 5091984 YP_001194877.1 CDS Fjoh_2531 NC_009441.1 3013546 3015768 R PFAM: protein of unknown function DUF893, YccS/YhfK; hypothetical protein complement(3013546..3015768) Flavobacterium johnsoniae UW101 5091985 YP_001194878.1 CDS def NC_009441.1 3015968 3016558 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 3015968..3016558 Flavobacterium johnsoniae UW101 5091986 YP_001194879.1 CDS Fjoh_2533 NC_009441.1 3016619 3017104 D hypothetical protein 3016619..3017104 Flavobacterium johnsoniae UW101 5091987 YP_001194880.1 CDS mazG NC_009441.1 3017206 3017976 D functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 3017206..3017976 Flavobacterium johnsoniae UW101 5091048 YP_001194881.1 CDS Fjoh_2535 NC_009441.1 3017979 3018659 R PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator complement(3017979..3018659) Flavobacterium johnsoniae UW101 5091049 YP_001194882.1 CDS Fjoh_2536 NC_009441.1 3018867 3021254 D PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; copper-exporting ATPase 3018867..3021254 Flavobacterium johnsoniae UW101 5091050 YP_001194883.1 CDS Fjoh_2537 NC_009441.1 3021564 3023747 D CcoN/CcoO FixN/FixO; bifunctional cbb3-type cytochrome c oxidase subunit I/II 3021564..3023747 Flavobacterium johnsoniae UW101 5091051 YP_001194884.1 CDS Fjoh_2538 NC_009441.1 3023953 3024894 D PFAM: cytochrome c, class I; cytochrome c, class I 3023953..3024894 Flavobacterium johnsoniae UW101 5091052 YP_001194885.1 CDS Fjoh_2539 NC_009441.1 3024906 3026324 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3024906..3026324 Flavobacterium johnsoniae UW101 5091053 YP_001194886.1 CDS Fjoh_2540 NC_009441.1 3026338 3026787 D hypothetical protein 3026338..3026787 Flavobacterium johnsoniae UW101 5091054 YP_001194887.1 CDS Fjoh_2541 NC_009441.1 3026879 3027580 D hypothetical protein 3026879..3027580 Flavobacterium johnsoniae UW101 5091055 YP_001194888.1 CDS Fjoh_2542 NC_009441.1 3027577 3028941 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3027577..3028941) Flavobacterium johnsoniae UW101 5091056 YP_001194889.1 CDS Fjoh_2543 NC_009441.1 3029070 3029540 R hypothetical protein complement(3029070..3029540) Flavobacterium johnsoniae UW101 5091057 YP_001194890.1 CDS Fjoh_2544 NC_009441.1 3029653 3030000 R hypothetical protein complement(3029653..3030000) Flavobacterium johnsoniae UW101 5091058 YP_001194891.1 CDS Fjoh_2545 NC_009441.1 3030118 3030540 R PFAM: DoxX family protein; DoxX family protein complement(3030118..3030540) Flavobacterium johnsoniae UW101 5091059 YP_001194892.1 CDS Fjoh_2546 NC_009441.1 3030661 3032289 R PFAM: carboxyl transferase; propionyl-CoA carboxylase complement(3030661..3032289) Flavobacterium johnsoniae UW101 5091060 YP_001194893.1 CDS Fjoh_2547 NC_009441.1 3032460 3033050 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 3032460..3033050 Flavobacterium johnsoniae UW101 5091061 YP_001194894.1 CDS Fjoh_2548 NC_009441.1 3033120 3033578 D hypothetical protein 3033120..3033578 Flavobacterium johnsoniae UW101 5091062 YP_001194895.1 CDS Fjoh_2549 NC_009441.1 3033581 3033892 D hypothetical protein 3033581..3033892 Flavobacterium johnsoniae UW101 5091063 YP_001194896.1 CDS Fjoh_2550 NC_009441.1 3033898 3034104 D hypothetical protein 3033898..3034104 Flavobacterium johnsoniae UW101 5091064 YP_001194897.1 CDS Fjoh_2551 NC_009441.1 3034329 3035327 R TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(3034329..3035327) Flavobacterium johnsoniae UW101 5091065 YP_001194898.1 CDS Fjoh_2552 NC_009441.1 3035662 3036108 R TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase complement(3035662..3036108) Flavobacterium johnsoniae UW101 5091066 YP_001194899.1 CDS Fjoh_2553 NC_009441.1 3036191 3036955 R TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 2 complement(3036191..3036955) Flavobacterium johnsoniae UW101 5091067 YP_001194900.1 CDS Fjoh_2554 NC_009441.1 3037634 3038653 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 3037634..3038653 Flavobacterium johnsoniae UW101 5091068 YP_001194901.1 CDS Fjoh_2555 NC_009441.1 3038787 3039107 R PFAM: conserved hypothetical protein 103; hypothetical protein complement(3038787..3039107) Flavobacterium johnsoniae UW101 5091069 YP_001194902.1 CDS Fjoh_2556 NC_009441.1 3039258 3041318 D PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; oligopeptidase B 3039258..3041318 Flavobacterium johnsoniae UW101 5091070 YP_001194903.1 CDS Fjoh_2557 NC_009441.1 3041389 3042429 D PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent enzyme subunit beta 3041389..3042429 Flavobacterium johnsoniae UW101 5091071 YP_001194904.1 CDS Fjoh_2558 NC_009441.1 3042802 3043722 D hypothetical protein 3042802..3043722 Flavobacterium johnsoniae UW101 5091072 YP_001194905.1 CDS Fjoh_2559 NC_009441.1 3044067 3044960 D hypothetical protein 3044067..3044960 Flavobacterium johnsoniae UW101 5091073 YP_001194906.1 CDS Fjoh_2560 NC_009441.1 3045230 3045943 R PFAM: protein of unknown function DUF28; hypothetical protein complement(3045230..3045943) Flavobacterium johnsoniae UW101 5091074 YP_001194907.1 CDS Fjoh_2561 NC_009441.1 3046081 3048111 R PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; C-terminal processing peptidase complement(3046081..3048111) Flavobacterium johnsoniae UW101 5091075 YP_001194908.1 CDS gcvT NC_009441.1 3048321 3049403 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(3048321..3049403) Flavobacterium johnsoniae UW101 5091076 YP_001194909.1 CDS Fjoh_2563 NC_009441.1 3049734 3050579 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; carbohydrate kinase 3049734..3050579 Flavobacterium johnsoniae UW101 5091077 YP_001194910.1 CDS Fjoh_2564 NC_009441.1 3050795 3051577 D hypothetical protein 3050795..3051577 Flavobacterium johnsoniae UW101 5091078 YP_001194911.1 CDS Fjoh_2565 NC_009441.1 3051567 3051950 D hypothetical protein 3051567..3051950 Flavobacterium johnsoniae UW101 5091079 YP_001194912.1 CDS Fjoh_2566 NC_009441.1 3052291 3053397 R PFAM: Pectate lyase/Amb allergen; Pectate lyase/Amb allergen complement(3052291..3053397) Flavobacterium johnsoniae UW101 5091080 YP_001194913.1 CDS Fjoh_2567 NC_009441.1 3053632 3054201 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 3053632..3054201 Flavobacterium johnsoniae UW101 5091081 YP_001194914.1 CDS Fjoh_2568 NC_009441.1 3054518 3055024 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3054518..3055024) Flavobacterium johnsoniae UW101 5091082 YP_001194915.1 CDS Fjoh_2569 NC_009441.1 3055247 3055480 R hypothetical protein complement(3055247..3055480) Flavobacterium johnsoniae UW101 5091083 YP_001194916.1 CDS Fjoh_2570 NC_009441.1 3055464 3055988 R hypothetical protein complement(3055464..3055988) Flavobacterium johnsoniae UW101 5091084 YP_001194917.1 CDS Fjoh_2571 NC_009441.1 3056125 3056520 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 3056125..3056520 Flavobacterium johnsoniae UW101 5091085 YP_001194918.1 CDS Fjoh_2572 NC_009441.1 3056710 3059355 D HSP90 family molecular chaperone-like protein 3056710..3059355 Flavobacterium johnsoniae UW101 5091086 YP_001194919.1 CDS Fjoh_2573 NC_009441.1 3059408 3060697 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(3059408..3060697) Flavobacterium johnsoniae UW101 5091087 YP_001194920.1 CDS Fjoh_2574 NC_009441.1 3060792 3061712 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(3060792..3061712) Flavobacterium johnsoniae UW101 5091088 YP_001194921.1 CDS thrA NC_009441.1 3061880 3064327 R multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I complement(3061880..3064327) Flavobacterium johnsoniae UW101 5091089 YP_001194922.1 CDS Fjoh_2576 NC_009441.1 3064914 3066485 D TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 3064914..3066485 Flavobacterium johnsoniae UW101 5091090 YP_001194923.1 CDS Fjoh_2577 NC_009441.1 3066535 3067179 D PFAM: protein of unknown function DUF47; hypothetical protein 3066535..3067179 Flavobacterium johnsoniae UW101 5091091 YP_001194924.1 CDS Fjoh_2578 NC_009441.1 3067210 3068544 D PFAM: phosphate transporter; phosphate transporter 3067210..3068544 Flavobacterium johnsoniae UW101 5091092 YP_001194925.1 CDS Fjoh_2579 NC_009441.1 3068783 3069295 D hypothetical protein 3068783..3069295 Flavobacterium johnsoniae UW101 5091093 YP_001194926.1 CDS Fjoh_2580 NC_009441.1 3069330 3070697 D hypothetical protein 3069330..3070697 Flavobacterium johnsoniae UW101 5091094 YP_001194927.1 CDS Fjoh_2581 NC_009441.1 3070745 3071263 R hypothetical protein complement(3070745..3071263) Flavobacterium johnsoniae UW101 5091095 YP_001194928.1 CDS Fjoh_2582 NC_009441.1 3071366 3072733 R TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; protein of unknown function DUF785; RimK domain protein ATP-grasp; alpha-L-glutamate ligase complement(3071366..3072733) Flavobacterium johnsoniae UW101 5091096 YP_001194929.1 CDS Fjoh_2583 NC_009441.1 3072873 3075419 R PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase complement(3072873..3075419) Flavobacterium johnsoniae UW101 5091097 YP_001194930.1 CDS Fjoh_2584 NC_009441.1 3075678 3078317 D TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; DNA gyrase subunit A 3075678..3078317 Flavobacterium johnsoniae UW101 5091098 YP_001194931.1 CDS Fjoh_2585 NC_009441.1 3078368 3079642 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 3078368..3079642 Flavobacterium johnsoniae UW101 5091099 YP_001194932.1 CDS Fjoh_2586 NC_009441.1 3079712 3080131 R PFAM: OsmC family protein; OsmC family protein complement(3079712..3080131) Flavobacterium johnsoniae UW101 5091100 YP_001194933.1 CDS Fjoh_2587 NC_009441.1 3080424 3082403 R hypothetical protein complement(3080424..3082403) Flavobacterium johnsoniae UW101 5091101 YP_001194934.1 CDS Fjoh_2588 NC_009441.1 3082649 3083395 R hypothetical protein complement(3082649..3083395) Flavobacterium johnsoniae UW101 5091102 YP_001194935.1 CDS Fjoh_2589 NC_009441.1 3083460 3084209 R PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; shikimate dehydrogenase complement(3083460..3084209) Flavobacterium johnsoniae UW101 5093484 YP_001194936.1 CDS Fjoh_2590 NC_009441.1 3084212 3085606 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(3084212..3085606) Flavobacterium johnsoniae UW101 5093485 YP_001194937.1 CDS Fjoh_2591 NC_009441.1 3085774 3086967 R PFAM: aminotransferase class-III; class III aminotransferase complement(3085774..3086967) Flavobacterium johnsoniae UW101 5093486 YP_001194938.1 CDS Fjoh_2592 NC_009441.1 3087207 3088856 R PFAM: OstA family protein; OstA family protein complement(3087207..3088856) Flavobacterium johnsoniae UW101 5093487 YP_001194939.1 CDS Fjoh_2593 NC_009441.1 3089282 3091114 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase 3089282..3091114 Flavobacterium johnsoniae UW101 5093488 YP_001194940.1 CDS Fjoh_2594 NC_009441.1 3091103 3091432 R hypothetical protein complement(3091103..3091432) Flavobacterium johnsoniae UW101 5093489 YP_001194941.1 CDS Fjoh_2595 NC_009441.1 3091447 3092229 R PFAM: manganese and iron superoxide dismutase; superoxide dismutase complement(3091447..3092229) Flavobacterium johnsoniae UW101 5093490 YP_001194942.1 CDS Fjoh_2596 NC_009441.1 3092239 3092508 R PFAM: acyl-coA-binding protein, ACBP; acyl-CoA-binding protein complement(3092239..3092508) Flavobacterium johnsoniae UW101 5093491 YP_001194943.1 CDS Fjoh_2597 NC_009441.1 3092509 3093162 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(3092509..3093162) Flavobacterium johnsoniae UW101 5093492 YP_001194944.1 CDS Fjoh_2598 NC_009441.1 3093152 3094042 R PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(3093152..3094042) Flavobacterium johnsoniae UW101 5093493 YP_001194945.1 CDS Fjoh_2599 NC_009441.1 3094044 3094649 R hypothetical protein complement(3094044..3094649) Flavobacterium johnsoniae UW101 5093494 YP_001194946.1 CDS Fjoh_2600 NC_009441.1 3094766 3096691 R TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(3094766..3096691) Flavobacterium johnsoniae UW101 5093495 YP_001194947.1 CDS Fjoh_2601 NC_009441.1 3096708 3097079 R TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein complement(3096708..3097079) Flavobacterium johnsoniae UW101 5093496 YP_001194948.1 CDS Fjoh_2602 NC_009441.1 3097172 3097900 D TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin--acetyl-CoA-carboxylase ligase 3097172..3097900 Flavobacterium johnsoniae UW101 5093497 YP_001194949.1 CDS Fjoh_2603 NC_009441.1 3098240 3098632 R hypothetical protein complement(3098240..3098632) Flavobacterium johnsoniae UW101 5093498 YP_001194950.1 CDS pyrE NC_009441.1 3098808 3099452 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(3098808..3099452) Flavobacterium johnsoniae UW101 5093499 YP_001194951.1 CDS Fjoh_2605 NC_009441.1 3099460 3100110 D PFAM: NUDIX hydrolase; NUDIX hydrolase 3099460..3100110 Flavobacterium johnsoniae UW101 5093500 YP_001194952.1 CDS Fjoh_2606 NC_009441.1 3100270 3100659 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 3100270..3100659 Flavobacterium johnsoniae UW101 5093501 YP_001194953.1 CDS Fjoh_2607 NC_009441.1 3101200 3101685 D hypothetical protein 3101200..3101685 Flavobacterium johnsoniae UW101 5093502 YP_001194954.1 CDS Fjoh_2608 NC_009441.1 3101694 3104063 D PFAM: glycoside hydrolase, family 19; glycoside hydrolase 3101694..3104063 Flavobacterium johnsoniae UW101 5093503 YP_001194955.1 CDS Fjoh_2609 NC_009441.1 3104060 3104911 D hypothetical protein 3104060..3104911 Flavobacterium johnsoniae UW101 5093504 YP_001194956.1 CDS Fjoh_2610 NC_009441.1 3105201 3105995 D hypothetical protein 3105201..3105995 Flavobacterium johnsoniae UW101 5093505 YP_001194957.1 CDS Fjoh_2611 NC_009441.1 3107099 3107473 R hypothetical protein complement(3107099..3107473) Flavobacterium johnsoniae UW101 5093506 YP_001194958.1 CDS Fjoh_2612 NC_009441.1 3107586 3109313 R hypothetical protein complement(3107586..3109313) Flavobacterium johnsoniae UW101 5093507 YP_001194959.1 CDS Fjoh_2613 NC_009441.1 3109573 3110934 D PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 3109573..3110934 Flavobacterium johnsoniae UW101 5093508 YP_001194960.1 CDS Fjoh_2614 NC_009441.1 3111111 3111557 D hypothetical protein 3111111..3111557 Flavobacterium johnsoniae UW101 5093509 YP_001194961.1 CDS Fjoh_2615 NC_009441.1 3111735 3112313 R PFAM: PhnA protein-like; SMART: PhnA protein N-terminal, proteobacterial; PhnA protein-like protein complement(3111735..3112313) Flavobacterium johnsoniae UW101 5093510 YP_001194962.1 CDS coaD NC_009441.1 3112431 3112889 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(3112431..3112889) Flavobacterium johnsoniae UW101 5093511 YP_001194963.1 CDS Fjoh_2617 NC_009441.1 3112980 3113672 R PFAM: protein of unknown function DUF421; hypothetical protein complement(3112980..3113672) Flavobacterium johnsoniae UW101 5093512 YP_001194964.1 CDS ddl NC_009441.1 3113809 3114780 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A complement(3113809..3114780) Flavobacterium johnsoniae UW101 5093513 YP_001194965.1 CDS Fjoh_2619 NC_009441.1 3115012 3115629 D PFAM: PASTA domain containing protein; protein PASTA domain-containing protein 3115012..3115629 Flavobacterium johnsoniae UW101 5093514 YP_001194966.1 CDS Fjoh_2620 NC_009441.1 3115619 3116662 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 3115619..3116662 Flavobacterium johnsoniae UW101 5093515 YP_001194967.1 CDS Fjoh_2621 NC_009441.1 3116830 3117441 R hypothetical protein complement(3116830..3117441) Flavobacterium johnsoniae UW101 5093516 YP_001194968.1 CDS Fjoh_2622 NC_009441.1 3117448 3118689 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3117448..3118689) Flavobacterium johnsoniae UW101 5093517 YP_001194969.1 CDS Fjoh_2623 NC_009441.1 3118880 3119731 R PFAM: Rhodanese domain protein; rhodanese domain-containing protein complement(3118880..3119731) Flavobacterium johnsoniae UW101 5093518 YP_001194970.1 CDS Fjoh_2624 NC_009441.1 3119733 3120539 R hypothetical protein complement(3119733..3120539) Flavobacterium johnsoniae UW101 5093519 YP_001194971.1 CDS Fjoh_2625 NC_009441.1 3120599 3120988 R Phage envelope protein-like protein complement(3120599..3120988) Flavobacterium johnsoniae UW101 5093520 YP_001194972.1 CDS Fjoh_2626 NC_009441.1 3121052 3122044 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(3121052..3122044) Flavobacterium johnsoniae UW101 5093521 YP_001194973.1 CDS Fjoh_2627 NC_009441.1 3122140 3122976 R PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS complement(3122140..3122976) Flavobacterium johnsoniae UW101 5093522 YP_001194974.2 CDS Fjoh_2628 NC_009441.1 3123343 3126312 D PFAM: Fibronectin, type III domain protein; pectate lyase-like protein 3123343..3126312 Flavobacterium johnsoniae UW101 5093523 YP_001194975.1 CDS Fjoh_2629 NC_009441.1 3126378 3126815 R thioesterase-like protein complement(3126378..3126815) Flavobacterium johnsoniae UW101 5093524 YP_001194976.1 CDS Fjoh_2630 NC_009441.1 3126921 3128192 R PFAM: sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(3126921..3128192) Flavobacterium johnsoniae UW101 5093525 YP_001194977.1 CDS dnaK NC_009441.1 3128554 3130437 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 3128554..3130437 Flavobacterium johnsoniae UW101 5093526 YP_001194978.1 CDS Fjoh_2632 NC_009441.1 3130643 3131197 D hypothetical protein 3130643..3131197 Flavobacterium johnsoniae UW101 5093527 YP_001194979.1 CDS Fjoh_2633 NC_009441.1 3131194 3132453 D PFAM: phage integrase; phage integrase 3131194..3132453 Flavobacterium johnsoniae UW101 5093528 YP_001194980.1 CDS Fjoh_2634 NC_009441.1 3132450 3133199 D hypothetical protein 3132450..3133199 Flavobacterium johnsoniae UW101 5093529 YP_001194981.1 CDS Fjoh_2635 NC_009441.1 3133313 3133645 D TIGRFAM: DNA binding domain, excisionase family; DNA binding domain-containing protein 3133313..3133645 Flavobacterium johnsoniae UW101 5093530 YP_001194982.1 CDS Fjoh_2636 NC_009441.1 3133952 3135073 R PFAM: Integrase, catalytic region; transposase IS3/IS911 family protein; integrase catalytic subunit complement(3133952..3135073) Flavobacterium johnsoniae UW101 5093531 YP_001194983.1 CDS Fjoh_2637 NC_009441.1 3135092 3136204 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(3135092..3136204) Flavobacterium johnsoniae UW101 5093532 YP_001194984.1 CDS Fjoh_2638 NC_009441.1 3137498 3137689 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 3137498..3137689 Flavobacterium johnsoniae UW101 5093533 YP_001194985.1 CDS Fjoh_2639 NC_009441.1 3139565 3142030 R hypothetical protein complement(3139565..3142030) Flavobacterium johnsoniae UW101 5093534 YP_001194986.1 CDS Fjoh_2640 NC_009441.1 3142036 3143034 R PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; ATPase central domain-containing protein complement(3142036..3143034) Flavobacterium johnsoniae UW101 5093535 YP_001194987.1 CDS Fjoh_2641 NC_009441.1 3143243 3144430 D PFAM: glycoside hydrolase family 65, central catalytic; glycoside hydrolase 3143243..3144430 Flavobacterium johnsoniae UW101 5093536 YP_001194988.1 CDS Fjoh_2643 NC_009441.1 3145111 3146115 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(3145111..3146115) Flavobacterium johnsoniae UW101 5092484 YP_001194989.1 CDS Fjoh_2644 NC_009441.1 3146254 3146700 R hypothetical protein complement(3146254..3146700) Flavobacterium johnsoniae UW101 5093538 YP_001194990.1 CDS Fjoh_2645 NC_009441.1 3146713 3148293 R PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(3146713..3148293) Flavobacterium johnsoniae UW101 5093539 YP_001194991.1 CDS Fjoh_2646 NC_009441.1 3148512 3149081 R PFAM: protein of unknown function DUF892; hypothetical protein complement(3148512..3149081) Flavobacterium johnsoniae UW101 5090224 YP_001194992.1 CDS Fjoh_2648 NC_009441.1 3149473 3150426 R hypothetical protein complement(3149473..3150426) Flavobacterium johnsoniae UW101 5092485 YP_001194993.1 CDS Fjoh_2650 NC_009441.1 3151204 3151728 R hypothetical protein complement(3151204..3151728) Flavobacterium johnsoniae UW101 5092486 YP_001194994.1 CDS Fjoh_2651 NC_009441.1 3151860 3152270 R DNA-directed DNA polymerase complement(3151860..3152270) Flavobacterium johnsoniae UW101 5090227 YP_001194995.1 CDS Fjoh_2652 NC_009441.1 3152376 3153104 D PFAM: response regulator receiver; response regulator receiver protein 3152376..3153104 Flavobacterium johnsoniae UW101 5090228 YP_001194996.1 CDS Fjoh_2653 NC_009441.1 3153176 3153430 R hypothetical protein complement(3153176..3153430) Flavobacterium johnsoniae UW101 5090229 YP_001194997.1 CDS Fjoh_2654 NC_009441.1 3154141 3154464 D hypothetical protein 3154141..3154464 Flavobacterium johnsoniae UW101 5090230 YP_001194998.1 CDS Fjoh_2655 NC_009441.1 3155784 3156584 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(3155784..3156584) Flavobacterium johnsoniae UW101 5090231 YP_001194999.1 CDS Fjoh_2656 NC_009441.1 3156773 3159022 R hypothetical protein complement(3156773..3159022) Flavobacterium johnsoniae UW101 5090232 YP_001195000.1 CDS Fjoh_2657 NC_009441.1 3159559 3160725 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 3159559..3160725 Flavobacterium johnsoniae UW101 5090233 YP_001195001.1 CDS Fjoh_2658 NC_009441.1 3160905 3161198 D hypothetical protein 3160905..3161198 Flavobacterium johnsoniae UW101 5090234 YP_001195002.1 CDS Fjoh_2659 NC_009441.1 3161611 3162264 D PFAM: protein of unknown function DUF892; hypothetical protein 3161611..3162264 Flavobacterium johnsoniae UW101 5090235 YP_001195003.1 CDS Fjoh_2660 NC_009441.1 3163106 3164272 D glucose/sorbosone dehydrogenase-like protein 3163106..3164272 Flavobacterium johnsoniae UW101 5090236 YP_001195004.1 CDS Fjoh_2661 NC_009441.1 3164275 3165234 D hypothetical protein 3164275..3165234 Flavobacterium johnsoniae UW101 5090237 YP_001195005.1 CDS Fjoh_2662 NC_009441.1 3165264 3166364 D hypothetical protein 3165264..3166364 Flavobacterium johnsoniae UW101 5090238 YP_001195006.1 CDS Fjoh_2663 NC_009441.1 3166461 3166685 R hypothetical protein complement(3166461..3166685) Flavobacterium johnsoniae UW101 5090239 YP_001195007.1 CDS Fjoh_2664 NC_009441.1 3167404 3167973 R hypothetical protein complement(3167404..3167973) Flavobacterium johnsoniae UW101 5090240 YP_001195008.1 CDS Fjoh_2666 NC_009441.1 3169433 3171112 D hypothetical protein 3169433..3171112 Flavobacterium johnsoniae UW101 5092487 YP_001195009.1 CDS Fjoh_2667 NC_009441.1 3171116 3174574 D TIGRFAM: YD repeat protein; YD repeat-containing protein 3171116..3174574 Flavobacterium johnsoniae UW101 5090242 YP_001195010.1 CDS Fjoh_2668 NC_009441.1 3174588 3179819 D hypothetical protein 3174588..3179819 Flavobacterium johnsoniae UW101 5090243 YP_001195011.1 CDS Fjoh_2669 NC_009441.1 3179827 3180222 D hypothetical protein 3179827..3180222 Flavobacterium johnsoniae UW101 5090244 YP_001195012.1 CDS Fjoh_2670 NC_009441.1 3180725 3181369 D hypothetical protein 3180725..3181369 Flavobacterium johnsoniae UW101 5090245 YP_001195013.1 CDS Fjoh_2671 NC_009441.1 3181733 3182308 D PFAM: phage integrase; phage integrase 3181733..3182308 Flavobacterium johnsoniae UW101 5090246 YP_001195014.1 CDS Fjoh_2672 NC_009441.1 3182734 3183297 D hypothetical protein 3182734..3183297 Flavobacterium johnsoniae UW101 5090247 YP_001195015.1 CDS Fjoh_2673 NC_009441.1 3183302 3184981 D hypothetical protein 3183302..3184981 Flavobacterium johnsoniae UW101 5090248 YP_001195016.1 CDS Fjoh_2674 NC_009441.1 3185092 3186009 D PFAM: phage integrase; phage integrase 3185092..3186009 Flavobacterium johnsoniae UW101 5090249 YP_001195017.1 CDS Fjoh_2675 NC_009441.1 3186015 3186887 D PFAM: phage integrase; phage integrase 3186015..3186887 Flavobacterium johnsoniae UW101 5090250 YP_001195018.1 CDS Fjoh_2676 NC_009441.1 3186930 3187301 R hypothetical protein complement(3186930..3187301) Flavobacterium johnsoniae UW101 5090251 YP_001195019.1 CDS Fjoh_2677 NC_009441.1 3187414 3187677 D PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3187414..3187677 Flavobacterium johnsoniae UW101 5090252 YP_001195020.1 CDS Fjoh_2678 NC_009441.1 3188354 3189046 D hypothetical protein 3188354..3189046 Flavobacterium johnsoniae UW101 5090253 YP_001195021.1 CDS Fjoh_2679 NC_009441.1 3189064 3189411 D hypothetical protein 3189064..3189411 Flavobacterium johnsoniae UW101 5090254 YP_001195022.1 CDS Fjoh_2680 NC_009441.1 3189624 3190283 D PFAM: Insertion element protein; IS1 transposase; IS1 transposase 3189624..3190283 Flavobacterium johnsoniae UW101 5090255 YP_001195023.1 CDS Fjoh_2681 NC_009441.1 3190866 3191531 D hypothetical protein 3190866..3191531 Flavobacterium johnsoniae UW101 5090256 YP_001195024.1 CDS Fjoh_2682 NC_009441.1 3191569 3192078 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 3191569..3192078 Flavobacterium johnsoniae UW101 5090257 YP_001195025.1 CDS Fjoh_2683 NC_009441.1 3192132 3192623 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 3192132..3192623 Flavobacterium johnsoniae UW101 5090258 YP_001195026.1 CDS Fjoh_2684 NC_009441.1 3192676 3193191 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 3192676..3193191 Flavobacterium johnsoniae UW101 5090259 YP_001195027.1 CDS Fjoh_2685 NC_009441.1 3193203 3193703 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3193203..3193703 Flavobacterium johnsoniae UW101 5090260 YP_001195028.1 CDS Fjoh_2686 NC_009441.1 3193720 3194019 D hypothetical protein 3193720..3194019 Flavobacterium johnsoniae UW101 5090261 YP_001195029.1 CDS Fjoh_2687 NC_009441.1 3194046 3198602 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; hypothetical protein 3194046..3198602 Flavobacterium johnsoniae UW101 5090262 YP_001195030.1 CDS Fjoh_2688 NC_009441.1 3199267 3199848 D PFAM: SH3, type 3 domain protein; SH3 type 3 domain-containing protein 3199267..3199848 Flavobacterium johnsoniae UW101 5090263 YP_001195031.1 CDS Fjoh_2689 NC_009441.1 3200019 3200768 D hypothetical protein 3200019..3200768 Flavobacterium johnsoniae UW101 5090264 YP_001195032.1 CDS Fjoh_2690 NC_009441.1 3201038 3201703 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 3201038..3201703 Flavobacterium johnsoniae UW101 5090265 YP_001195033.1 CDS Fjoh_2691 NC_009441.1 3202017 3202622 R hypothetical protein complement(3202017..3202622) Flavobacterium johnsoniae UW101 5090266 YP_001195034.1 CDS Fjoh_2692 NC_009441.1 3202622 3203590 R hypothetical protein complement(3202622..3203590) Flavobacterium johnsoniae UW101 5090267 YP_001195035.1 CDS Fjoh_2693 NC_009441.1 3203874 3206420 R PFAM: protein of unknown function DUF262; hypothetical protein complement(3203874..3206420) Flavobacterium johnsoniae UW101 5090268 YP_001195036.1 CDS Fjoh_2694 NC_009441.1 3206417 3208222 R PFAM: protein of unknown function DUF262; hypothetical protein complement(3206417..3208222) Flavobacterium johnsoniae UW101 5090269 YP_001195037.1 CDS Fjoh_2695 NC_009441.1 3208411 3211437 R PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; hypothetical protein complement(3208411..3211437) Flavobacterium johnsoniae UW101 5090270 YP_001195038.1 CDS Fjoh_2696 NC_009441.1 3211434 3212141 R hypothetical protein complement(3211434..3212141) Flavobacterium johnsoniae UW101 5090271 YP_001195039.1 CDS Fjoh_2697 NC_009441.1 3212128 3213360 R SMART: AAA ATPase; ATPase AAA complement(3212128..3213360) Flavobacterium johnsoniae UW101 5090272 YP_001195040.1 CDS Fjoh_2698 NC_009441.1 3213362 3214165 R PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit complement(3213362..3214165) Flavobacterium johnsoniae UW101 5090273 YP_001195041.1 CDS Fjoh_2700 NC_009441.1 3214522 3214833 D hypothetical protein 3214522..3214833 Flavobacterium johnsoniae UW101 5092488 YP_001195042.1 CDS Fjoh_2701 NC_009441.1 3214830 3215165 D TIGRFAM: DNA binding domain, excisionase family; DNA binding domain-containing protein 3214830..3215165 Flavobacterium johnsoniae UW101 5090275 YP_001195043.1 CDS Fjoh_2702 NC_009441.1 3215285 3215698 D hypothetical protein 3215285..3215698 Flavobacterium johnsoniae UW101 5090276 YP_001195044.1 CDS Fjoh_2703 NC_009441.1 3216119 3216952 D hypothetical protein 3216119..3216952 Flavobacterium johnsoniae UW101 5090277 YP_001195045.1 CDS Fjoh_2704 NC_009441.1 3217305 3217694 R hypothetical protein complement(3217305..3217694) Flavobacterium johnsoniae UW101 5090278 YP_001195046.1 CDS Fjoh_2705 NC_009441.1 3218085 3219245 R PFAM: phage integrase; phage integrase complement(3218085..3219245) Flavobacterium johnsoniae UW101 5090279 YP_001195047.1 CDS Fjoh_2706 NC_009441.1 3219220 3219792 R TIGRFAM: DNA binding domain, excisionase family; DNA binding domain-containing protein complement(3219220..3219792) Flavobacterium johnsoniae UW101 5090502 YP_001195048.1 CDS trmE NC_009441.1 3220036 3221436 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3220036..3221436) Flavobacterium johnsoniae UW101 5090503 YP_001195049.1 CDS Fjoh_2708 NC_009441.1 3221619 3222452 D PFAM: UspA domain protein; UspA domain-containing protein 3221619..3222452 Flavobacterium johnsoniae UW101 5090504 YP_001195050.1 CDS Fjoh_2709 NC_009441.1 3222522 3224294 D PFAM: DNA mismatch repair protein MutS domain protein; DNA mismatch repair protein MutS domain-containing protein 3222522..3224294 Flavobacterium johnsoniae UW101 5090505 YP_001195051.1 CDS Fjoh_2710 NC_009441.1 3224740 3225750 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI 3224740..3225750 Flavobacterium johnsoniae UW101 5090506 YP_001195052.1 CDS Fjoh_2711 NC_009441.1 3226028 3229126 D PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug 3226028..3229126 Flavobacterium johnsoniae UW101 5090507 YP_001195053.1 CDS Fjoh_2712 NC_009441.1 3229139 3230653 D hypothetical protein 3229139..3230653 Flavobacterium johnsoniae UW101 5090508 YP_001195054.1 CDS Fjoh_2713 NC_009441.1 3231084 3233075 D PFAM: glycoside hydrolase family 2, sugar binding; glycoside hydrolase 3231084..3233075 Flavobacterium johnsoniae UW101 5090509 YP_001195055.1 CDS Fjoh_2714 NC_009441.1 3233222 3235483 D TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; alpha-1,2-mannosidase 3233222..3235483 Flavobacterium johnsoniae UW101 5090510 YP_001195056.1 CDS Fjoh_2715 NC_009441.1 3235636 3237915 D TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; alpha-1,2-mannosidase 3235636..3237915 Flavobacterium johnsoniae UW101 5090511 YP_001195057.1 CDS Fjoh_2716 NC_009441.1 3237924 3239387 D PFAM: uncharacterised conserved protein UCP028846; hypothetical protein 3237924..3239387 Flavobacterium johnsoniae UW101 5090512 YP_001195058.1 CDS Fjoh_2717 NC_009441.1 3239409 3240308 D PFAM: ROK family protein; ROK family protein 3239409..3240308 Flavobacterium johnsoniae UW101 5090513 YP_001195059.1 CDS Fjoh_2718 NC_009441.1 3240365 3240994 R PFAM: DSBA oxidoreductase; DSBA oxidoreductase complement(3240365..3240994) Flavobacterium johnsoniae UW101 5090514 YP_001195060.1 CDS Fjoh_2719 NC_009441.1 3241136 3241792 D hypothetical protein 3241136..3241792 Flavobacterium johnsoniae UW101 5090515 YP_001195061.1 CDS Fjoh_2720 NC_009441.1 3242147 3243265 R TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta complement(3242147..3243265) Flavobacterium johnsoniae UW101 5090516 YP_001195062.1 CDS Fjoh_2721 NC_009441.1 3243373 3245058 R gliding motility ABC transporter auxiliary component-like protein complement(3243373..3245058) Flavobacterium johnsoniae UW101 5090517 YP_001195063.1 CDS Fjoh_2722 NC_009441.1 3245058 3245783 R hypothetical protein complement(3245058..3245783) Flavobacterium johnsoniae UW101 5090518 YP_001195064.1 CDS Fjoh_2723 NC_009441.1 3245963 3246259 R PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(3245963..3246259) Flavobacterium johnsoniae UW101 5090519 YP_001195065.1 CDS Fjoh_2724 NC_009441.1 3246577 3247407 R PFAM: protein of unknown function DUF62; hypothetical protein complement(3246577..3247407) Flavobacterium johnsoniae UW101 5090520 YP_001195066.1 CDS Fjoh_2725 NC_009441.1 3247716 3248666 D PFAM: PhoH family protein; PhoH family protein 3247716..3248666 Flavobacterium johnsoniae UW101 5090521 YP_001195067.1 CDS Fjoh_2726 NC_009441.1 3248751 3249155 D hypothetical protein 3248751..3249155 Flavobacterium johnsoniae UW101 5090522 YP_001195068.1 CDS Fjoh_2727 NC_009441.1 3249279 3250124 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; cof family hydrolase 3249279..3250124 Flavobacterium johnsoniae UW101 5090523 YP_001195069.1 CDS Fjoh_2728 NC_009441.1 3250297 3251250 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 3250297..3251250 Flavobacterium johnsoniae UW101 5090524 YP_001195070.1 CDS Fjoh_2729 NC_009441.1 3251283 3252434 D PFAM: glycoside hydrolase, family 26; Mannan endo-1,4-beta-mannosidase 3251283..3252434 Flavobacterium johnsoniae UW101 5090525 YP_001195071.1 CDS Fjoh_2730 NC_009441.1 3252901 3253284 D PFAM: Ankyrin; ankyrin 3252901..3253284 Flavobacterium johnsoniae UW101 5090526 YP_001195072.1 CDS Fjoh_2731 NC_009441.1 3253464 3256562 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux protein complement(3253464..3256562) Flavobacterium johnsoniae UW101 5090527 YP_001195073.1 CDS Fjoh_2732 NC_009441.1 3256566 3257651 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3256566..3257651) Flavobacterium johnsoniae UW101 5090528 YP_001195074.1 CDS Fjoh_2733 NC_009441.1 3257664 3258911 R PFAM: outer membrane efflux protein; outer membrane efflux protein complement(3257664..3258911) Flavobacterium johnsoniae UW101 5090529 YP_001195075.1 CDS Fjoh_2734 NC_009441.1 3258999 3260360 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(3258999..3260360) Flavobacterium johnsoniae UW101 5090530 YP_001195076.1 CDS Fjoh_2735 NC_009441.1 3260357 3261037 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(3260357..3261037) Flavobacterium johnsoniae UW101 5090531 YP_001195077.1 CDS Fjoh_2736 NC_009441.1 3261103 3262191 R PFAM: peptidase M20; peptidase M42 family protein; peptidase M42 family protein complement(3261103..3262191) Flavobacterium johnsoniae UW101 5090532 YP_001195078.1 CDS Fjoh_2737 NC_009441.1 3262273 3262956 D hypothetical protein 3262273..3262956 Flavobacterium johnsoniae UW101 5090533 YP_001195079.1 CDS Fjoh_2738 NC_009441.1 3269448 3269915 D hypothetical protein 3269448..3269915 Flavobacterium johnsoniae UW101 5092495 YP_001195080.1 CDS Fjoh_2739 NC_009441.1 3269930 3270364 D hypothetical protein 3269930..3270364 Flavobacterium johnsoniae UW101 5090535 YP_001195081.1 CDS Fjoh_2740 NC_009441.1 3270366 3271016 R PFAM: HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase complement(3270366..3271016) Flavobacterium johnsoniae UW101 5090536 YP_001195082.1 CDS Fjoh_2741 NC_009441.1 3271062 3271928 R alpha/beta hydrolase complement(3271062..3271928) Flavobacterium johnsoniae UW101 5090537 YP_001195083.1 CDS Fjoh_2742 NC_009441.1 3272043 3273464 D TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; ADP-glucose type glycogen/starch synthase 3272043..3273464 Flavobacterium johnsoniae UW101 5090538 YP_001195084.1 CDS glgC NC_009441.1 3273461 3274741 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 3273461..3274741 Flavobacterium johnsoniae UW101 5090539 YP_001195085.1 CDS Fjoh_2744 NC_009441.1 3274745 3274870 R hypothetical protein complement(3274745..3274870) Flavobacterium johnsoniae UW101 5090540 YP_001195086.1 CDS Fjoh_2745 NC_009441.1 3274873 3276777 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 3274873..3276777 Flavobacterium johnsoniae UW101 5090541 YP_001195087.1 CDS Fjoh_2746 NC_009441.1 3276980 3279379 D PFAM: glycoside hydrolase, family 31; alpha-glucosidase 3276980..3279379 Flavobacterium johnsoniae UW101 5090542 YP_001195088.1 CDS Fjoh_2747 NC_009441.1 3279463 3280272 D PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p 3279463..3280272 Flavobacterium johnsoniae UW101 5090543 YP_001195089.1 CDS Fjoh_2748 NC_009441.1 3280433 3281752 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 3280433..3281752 Flavobacterium johnsoniae UW101 5090544 YP_001195090.1 CDS Fjoh_2749 NC_009441.1 3281846 3282568 R hypothetical protein complement(3281846..3282568) Flavobacterium johnsoniae UW101 5090545 YP_001195091.1 CDS Fjoh_2750 NC_009441.1 3282589 3283647 R hypothetical protein complement(3282589..3283647) Flavobacterium johnsoniae UW101 5090546 YP_001195092.1 CDS Fjoh_2751 NC_009441.1 3283631 3284167 R hypothetical protein complement(3283631..3284167) Flavobacterium johnsoniae UW101 5090547 YP_001195093.1 CDS Fjoh_2752 NC_009441.1 3284234 3284800 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(3284234..3284800) Flavobacterium johnsoniae UW101 5090548 YP_001195094.1 CDS Fjoh_2753 NC_009441.1 3284972 3285664 D hypothetical protein 3284972..3285664 Flavobacterium johnsoniae UW101 5090549 YP_001195095.1 CDS Fjoh_2754 NC_009441.1 3285883 3288336 D TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 3285883..3288336 Flavobacterium johnsoniae UW101 5090550 YP_001195096.1 CDS Fjoh_2755 NC_009441.1 3288483 3289502 D hypothetical protein 3288483..3289502 Flavobacterium johnsoniae UW101 5090551 YP_001195097.1 CDS cmk NC_009441.1 3289718 3290410 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 3289718..3290410 Flavobacterium johnsoniae UW101 5090552 YP_001195098.1 CDS Fjoh_2757 NC_009441.1 3290480 3291856 D TIGRFAM: nucleoside transporter; PFAM: nucleoside:H+ symporter; major facilitator superfamily MFS_1; nucleoside transporter 3290480..3291856 Flavobacterium johnsoniae UW101 5090553 YP_001195099.1 CDS Fjoh_2758 NC_009441.1 3291957 3292883 R hypothetical protein complement(3291957..3292883) Flavobacterium johnsoniae UW101 5090554 YP_001195100.1 CDS Fjoh_2759 NC_009441.1 3293061 3293819 D hypothetical protein 3293061..3293819 Flavobacterium johnsoniae UW101 5090555 YP_001195101.1 CDS Fjoh_2760 NC_009441.1 3293965 3294621 D hypothetical protein 3293965..3294621 Flavobacterium johnsoniae UW101 5090556 YP_001195102.1 CDS Fjoh_2761 NC_009441.1 3294796 3295674 D hypothetical protein 3294796..3295674 Flavobacterium johnsoniae UW101 5093206 YP_001195103.1 CDS rpsA NC_009441.1 3295840 3297615 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 3295840..3297615 Flavobacterium johnsoniae UW101 5093207 YP_001195104.1 CDS Fjoh_2763 NC_009441.1 3297741 3298265 R hypothetical protein complement(3297741..3298265) Flavobacterium johnsoniae UW101 5093208 YP_001195105.1 CDS Fjoh_2764 NC_009441.1 3298289 3298816 R hypothetical protein complement(3298289..3298816) Flavobacterium johnsoniae UW101 5093209 YP_001195106.1 CDS Fjoh_2765 NC_009441.1 3299030 3299584 D PFAM: beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 3299030..3299584 Flavobacterium johnsoniae UW101 5093210 YP_001195107.1 CDS Fjoh_2766 NC_009441.1 3299648 3300493 R PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein complement(3299648..3300493) Flavobacterium johnsoniae UW101 5093211 YP_001195108.1 CDS Fjoh_2767 NC_009441.1 3300552 3300695 R hypothetical protein complement(3300552..3300695) Flavobacterium johnsoniae UW101 5093212 YP_001195109.1 CDS Fjoh_2768 NC_009441.1 3300776 3302227 R PFAM: beta-lactamase; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; beta-lactamase complement(3300776..3302227) Flavobacterium johnsoniae UW101 5093213 YP_001195110.1 CDS Fjoh_2769 NC_009441.1 3302250 3304055 R PFAM: peptidase M56, BlaR1; peptidase M56, BlaR1 complement(3302250..3304055) Flavobacterium johnsoniae UW101 5093214 YP_001195111.1 CDS Fjoh_2770 NC_009441.1 3304061 3304429 R PFAM: Penicillinase repressor; CopY family transcriptional regulator complement(3304061..3304429) Flavobacterium johnsoniae UW101 5093215 YP_001195112.1 CDS Fjoh_2771 NC_009441.1 3304457 3306004 R PFAM: peptidase M56, BlaR1; peptidase M56, BlaR1 complement(3304457..3306004) Flavobacterium johnsoniae UW101 5093216 YP_001195113.1 CDS Fjoh_2772 NC_009441.1 3306058 3306426 R PFAM: Penicillinase repressor; CopY family transcriptional regulator complement(3306058..3306426) Flavobacterium johnsoniae UW101 5093217 YP_001195114.1 CDS Fjoh_2773 NC_009441.1 3306597 3307811 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(3306597..3307811) Flavobacterium johnsoniae UW101 5093218 YP_001195115.1 CDS Fjoh_2774 NC_009441.1 3307909 3308508 D PFAM: protein of unknown function DUF1684; hypothetical protein 3307909..3308508 Flavobacterium johnsoniae UW101 5093219 YP_001195116.1 CDS Fjoh_2775 NC_009441.1 3308508 3309161 D PFAM: TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 3308508..3309161 Flavobacterium johnsoniae UW101 5093220 YP_001195117.1 CDS Fjoh_2776 NC_009441.1 3309218 3309931 D PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 3309218..3309931 Flavobacterium johnsoniae UW101 5093221 YP_001195118.1 CDS Fjoh_2777 NC_009441.1 3310072 3310734 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 3310072..3310734 Flavobacterium johnsoniae UW101 5093222 YP_001195119.1 CDS Fjoh_2778 NC_009441.1 3310805 3311647 D hypothetical protein 3310805..3311647 Flavobacterium johnsoniae UW101 5093223 YP_001195120.1 CDS Fjoh_2779 NC_009441.1 3311737 3312234 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3311737..3312234) Flavobacterium johnsoniae UW101 5093224 YP_001195121.1 CDS Fjoh_2780 NC_009441.1 3312299 3313474 R thioredoxin-like protein complement(3312299..3313474) Flavobacterium johnsoniae UW101 5093225 YP_001195122.1 CDS Fjoh_2781 NC_009441.1 3313652 3315316 D PFAM: thiamine pyrophosphate enzyme TPP binding domain protein; 2-oxoglutarate decarboxylase 3313652..3315316 Flavobacterium johnsoniae UW101 5093226 YP_001195123.1 CDS Fjoh_2782 NC_009441.1 3315407 3315748 D hypothetical protein 3315407..3315748 Flavobacterium johnsoniae UW101 5093227 YP_001195124.1 CDS Fjoh_2783 NC_009441.1 3315884 3316738 D hypothetical protein 3315884..3316738 Flavobacterium johnsoniae UW101 5093228 YP_001195125.1 CDS Fjoh_2784 NC_009441.1 3317458 3318291 D TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; naphthoate synthase 3317458..3318291 Flavobacterium johnsoniae UW101 5093229 YP_001195126.1 CDS Fjoh_2785 NC_009441.1 3318458 3319420 D TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3318458..3319420 Flavobacterium johnsoniae UW101 5093230 YP_001195127.1 CDS Fjoh_2786 NC_009441.1 3319450 3320127 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 3319450..3320127 Flavobacterium johnsoniae UW101 5093231 YP_001195128.1 CDS Fjoh_2787 NC_009441.1 3320224 3321426 D PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 3320224..3321426 Flavobacterium johnsoniae UW101 5093232 YP_001195129.1 CDS Fjoh_2788 NC_009441.1 3321464 3322531 D PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 3321464..3322531 Flavobacterium johnsoniae UW101 5093233 YP_001195130.1 CDS Fjoh_2789 NC_009441.1 3322600 3323154 R hypothetical protein complement(3322600..3323154) Flavobacterium johnsoniae UW101 5093234 YP_001195131.1 CDS Fjoh_2790 NC_009441.1 3323171 3324082 R PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(3323171..3324082) Flavobacterium johnsoniae UW101 5093235 YP_001195132.1 CDS Fjoh_2791 NC_009441.1 3324279 3324755 D PFAM: adenylate cyclase; adenylate cyclase 3324279..3324755 Flavobacterium johnsoniae UW101 5093236 YP_001195133.1 CDS Fjoh_2792 NC_009441.1 3324759 3325727 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3324759..3325727 Flavobacterium johnsoniae UW101 5093237 YP_001195134.1 CDS Fjoh_2793 NC_009441.1 3325866 3327434 R PFAM: protein of unknown function UPF0061; hypothetical protein complement(3325866..3327434) Flavobacterium johnsoniae UW101 5093238 YP_001195135.1 CDS Fjoh_2794 NC_009441.1 3327570 3328103 R TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(3327570..3328103) Flavobacterium johnsoniae UW101 5093239 YP_001195136.1 CDS Fjoh_2795 NC_009441.1 3328284 3329771 D PFAM: aminotransferase, class V; class V aminotransferase 3328284..3329771 Flavobacterium johnsoniae UW101 5093240 YP_001195137.1 CDS Fjoh_2796 NC_009441.1 3329865 3331607 R PFAM: amino acid permease-associated region; amino acid permease complement(3329865..3331607) Flavobacterium johnsoniae UW101 5093241 YP_001195138.1 CDS Fjoh_2797 NC_009441.1 3331726 3332196 R hypothetical protein complement(3331726..3332196) Flavobacterium johnsoniae UW101 5093242 YP_001195139.1 CDS Fjoh_2798 NC_009441.1 3332248 3332523 R hypothetical protein complement(3332248..3332523) Flavobacterium johnsoniae UW101 5093243 YP_001195140.1 CDS Fjoh_2799 NC_009441.1 3332790 3333275 R hypothetical protein complement(3332790..3333275) Flavobacterium johnsoniae UW101 5093244 YP_001195141.1 CDS Fjoh_2800 NC_009441.1 3333276 3333953 R PFAM: peptidase M23B; peptidase M23B complement(3333276..3333953) Flavobacterium johnsoniae UW101 5093245 YP_001195142.1 CDS Fjoh_2801 NC_009441.1 3333965 3334630 R PFAM: Spermine synthase; spermine synthase complement(3333965..3334630) Flavobacterium johnsoniae UW101 5093246 YP_001195143.1 CDS Fjoh_2802 NC_009441.1 3334696 3335247 D PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3334696..3335247 Flavobacterium johnsoniae UW101 5093247 YP_001195144.1 CDS Fjoh_2803 NC_009441.1 3335331 3335798 R PFAM: bacteriophage CI repressor; SMART: helix-turn-helix domain protein; bacteriophage CI repressor complement(3335331..3335798) Flavobacterium johnsoniae UW101 5093248 YP_001195145.1 CDS Fjoh_2804 NC_009441.1 3336111 3337265 D SMART: peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A 3336111..3337265 Flavobacterium johnsoniae UW101 5093249 YP_001195146.1 CDS Fjoh_2805 NC_009441.1 3337343 3337822 D PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator 3337343..3337822 Flavobacterium johnsoniae UW101 5093250 YP_001195147.1 CDS Fjoh_2806 NC_009441.1 3337915 3340500 D phosphoenolpyruvate carboxylase 3337915..3340500 Flavobacterium johnsoniae UW101 5093251 YP_001195148.1 CDS Fjoh_2807 NC_009441.1 3340514 3341029 D hypothetical protein 3340514..3341029 Flavobacterium johnsoniae UW101 5093252 YP_001195149.1 CDS Fjoh_2808 NC_009441.1 3341092 3343209 R TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ complement(3341092..3343209) Flavobacterium johnsoniae UW101 5093253 YP_001195150.1 CDS Fjoh_2809 NC_009441.1 3343353 3343766 R hypothetical protein complement(3343353..3343766) Flavobacterium johnsoniae UW101 5093254 YP_001195151.1 CDS Fjoh_2810 NC_009441.1 3343776 3344744 R PFAM: deoxyhypusine synthase; deoxyhypusine synthase complement(3343776..3344744) Flavobacterium johnsoniae UW101 5093255 YP_001195152.1 CDS Fjoh_2811 NC_009441.1 3344854 3346257 R PFAM: Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 complement(3344854..3346257) Flavobacterium johnsoniae UW101 5093256 YP_001195153.1 CDS Fjoh_2812 NC_009441.1 3346557 3347624 R PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(3346557..3347624) Flavobacterium johnsoniae UW101 5093257 YP_001195154.1 CDS Fjoh_2813 NC_009441.1 3347758 3350079 R PFAM: TPR repeat-containing protein; O-antigen polymerase; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; O-antigen polymerase complement(3347758..3350079) Flavobacterium johnsoniae UW101 5093258 YP_001195155.1 CDS Fjoh_2814 NC_009441.1 3350276 3351445 D PFAM: Proline dehydrogenase; proline dehydrogenase 3350276..3351445 Flavobacterium johnsoniae UW101 5093259 YP_001195156.1 CDS Fjoh_2815 NC_009441.1 3351597 3353381 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3351597..3353381) Flavobacterium johnsoniae UW101 5093260 YP_001195157.1 CDS Fjoh_2816 NC_009441.1 3354387 3354794 D hypothetical protein 3354387..3354794 Flavobacterium johnsoniae UW101 5092497 YP_001195158.1 CDS Fjoh_2817 NC_009441.1 3354851 3355423 R hypothetical protein complement(3354851..3355423) Flavobacterium johnsoniae UW101 5090447 YP_001195159.1 CDS Fjoh_2818 NC_009441.1 3355553 3355948 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3355553..3355948 Flavobacterium johnsoniae UW101 5090448 YP_001195160.1 CDS Fjoh_2819 NC_009441.1 3355959 3356321 R hypothetical protein complement(3355959..3356321) Flavobacterium johnsoniae UW101 5090449 YP_001195161.1 CDS Fjoh_2820 NC_009441.1 3356380 3357318 R hypothetical protein complement(3356380..3357318) Flavobacterium johnsoniae UW101 5090450 YP_001195162.1 CDS Fjoh_2821 NC_009441.1 3357407 3357952 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(3357407..3357952) Flavobacterium johnsoniae UW101 5090451 YP_001195163.1 CDS Fjoh_2822 NC_009441.1 3357975 3358385 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3357975..3358385) Flavobacterium johnsoniae UW101 5090452 YP_001195164.1 CDS Fjoh_2823 NC_009441.1 3358458 3359573 R PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; FAD-binding monooxygenase complement(3358458..3359573) Flavobacterium johnsoniae UW101 5090453 YP_001195165.1 CDS Fjoh_2824 NC_009441.1 3359647 3360402 R SMART: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(3359647..3360402) Flavobacterium johnsoniae UW101 5090454 YP_001195166.1 CDS Fjoh_2825 NC_009441.1 3360438 3361400 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(3360438..3361400) Flavobacterium johnsoniae UW101 5090455 YP_001195167.1 CDS Fjoh_2826 NC_009441.1 3361493 3362656 D PFAM: monooxygenase, FAD-binding; FAD-binding monooxygenase 3361493..3362656 Flavobacterium johnsoniae UW101 5090456 YP_001195168.1 CDS Fjoh_2827 NC_009441.1 3362809 3363183 R hypothetical protein complement(3362809..3363183) Flavobacterium johnsoniae UW101 5090457 YP_001195169.1 CDS Fjoh_2828 NC_009441.1 3363190 3363657 R PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein complement(3363190..3363657) Flavobacterium johnsoniae UW101 5090458 YP_001195170.1 CDS Fjoh_2829 NC_009441.1 3363661 3363987 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(3363661..3363987) Flavobacterium johnsoniae UW101 5090459 YP_001195171.1 CDS Fjoh_2830 NC_009441.1 3364138 3364485 D hypothetical protein 3364138..3364485 Flavobacterium johnsoniae UW101 5090460 YP_001195172.1 CDS Fjoh_2831 NC_009441.1 3364541 3365593 R PFAM: Choloylglycine hydrolase; choloylglycine hydrolase complement(3364541..3365593) Flavobacterium johnsoniae UW101 5090461 YP_001195173.1 CDS Fjoh_2832 NC_009441.1 3365751 3366182 R hypothetical protein complement(3365751..3366182) Flavobacterium johnsoniae UW101 5090462 YP_001195174.1 CDS Fjoh_2833 NC_009441.1 3366250 3367182 R hypothetical protein complement(3366250..3367182) Flavobacterium johnsoniae UW101 5090463 YP_001195175.1 CDS Fjoh_2834 NC_009441.1 3367201 3368052 R nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein complement(3367201..3368052) Flavobacterium johnsoniae UW101 5090464 YP_001195176.1 CDS Fjoh_2835 NC_009441.1 3368105 3368578 R hypothetical protein complement(3368105..3368578) Flavobacterium johnsoniae UW101 5090465 YP_001195177.1 CDS Fjoh_2836 NC_009441.1 3368578 3368970 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3368578..3368970) Flavobacterium johnsoniae UW101 5090466 YP_001195178.1 CDS Fjoh_2837 NC_009441.1 3369006 3369875 R PFAM: purine or other phosphorylase, family 1; purine phosphorylase family 1 complement(3369006..3369875) Flavobacterium johnsoniae UW101 5090467 YP_001195179.1 CDS Fjoh_2838 NC_009441.1 3369976 3370308 R PFAM: translation initiation factor SUI1; translation initiation factor SUI1 complement(3369976..3370308) Flavobacterium johnsoniae UW101 5090468 YP_001195180.1 CDS Fjoh_2839 NC_009441.1 3370440 3371390 R PFAM: 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase complement(3370440..3371390) Flavobacterium johnsoniae UW101 5090469 YP_001195181.1 CDS Fjoh_2840 NC_009441.1 3371756 3373732 D PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein; dehydrogenase, E1 component 3371756..3373732 Flavobacterium johnsoniae UW101 5090470 YP_001195182.1 CDS Fjoh_2841 NC_009441.1 3373896 3374867 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase complement(3373896..3374867) Flavobacterium johnsoniae UW101 5090471 YP_001195183.1 CDS Fjoh_2842 NC_009441.1 3374954 3375529 R PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(3374954..3375529) Flavobacterium johnsoniae UW101 5090472 YP_001195184.1 CDS Fjoh_2843 NC_009441.1 3375562 3376023 R hypothetical protein complement(3375562..3376023) Flavobacterium johnsoniae UW101 5090473 YP_001195185.1 CDS Fjoh_2844 NC_009441.1 3376035 3376442 R hypothetical protein complement(3376035..3376442) Flavobacterium johnsoniae UW101 5090474 YP_001195186.1 CDS Fjoh_2845 NC_009441.1 3376568 3376996 D hypothetical protein 3376568..3376996 Flavobacterium johnsoniae UW101 5090475 YP_001195187.1 CDS Fjoh_2846 NC_009441.1 3377071 3378330 R PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS complement(3377071..3378330) Flavobacterium johnsoniae UW101 5090476 YP_001195188.1 CDS Fjoh_2847 NC_009441.1 3378323 3378616 R hypothetical protein complement(3378323..3378616) Flavobacterium johnsoniae UW101 5090477 YP_001195189.1 CDS Fjoh_2848 NC_009441.1 3378721 3379254 D hypothetical protein 3378721..3379254 Flavobacterium johnsoniae UW101 5090478 YP_001195190.1 CDS Fjoh_2849 NC_009441.1 3379364 3380902 D PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; type III restriction enzyme, res subunit 3379364..3380902 Flavobacterium johnsoniae UW101 5090479 YP_001195191.1 CDS Fjoh_2850 NC_009441.1 3381093 3382427 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 3381093..3382427 Flavobacterium johnsoniae UW101 5090480 YP_001195192.1 CDS Fjoh_2851 NC_009441.1 3382510 3383778 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3382510..3383778 Flavobacterium johnsoniae UW101 5090481 YP_001195193.1 CDS Fjoh_2852 NC_009441.1 3383856 3385085 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter complement(3383856..3385085) Flavobacterium johnsoniae UW101 5090482 YP_001195194.1 CDS Fjoh_2853 NC_009441.1 3385226 3385645 D hypothetical protein 3385226..3385645 Flavobacterium johnsoniae UW101 5090483 YP_001195195.1 CDS Fjoh_2854 NC_009441.1 3385710 3386105 R hypothetical protein complement(3385710..3386105) Flavobacterium johnsoniae UW101 5090484 YP_001195196.1 CDS Fjoh_2855 NC_009441.1 3386819 3387133 D hypothetical protein 3386819..3387133 Flavobacterium johnsoniae UW101 5090485 YP_001195197.1 CDS Fjoh_2856 NC_009441.1 3387130 3387417 R PFAM: plasmid stabilization system; plasmid stabilization system protein complement(3387130..3387417) Flavobacterium johnsoniae UW101 5090486 YP_001195198.1 CDS Fjoh_2858 NC_009441.1 3389998 3390594 D PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; exonuclease 3389998..3390594 Flavobacterium johnsoniae UW101 5092498 YP_001195199.1 CDS Fjoh_2859 NC_009441.1 3390701 3392611 R TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetate--CoA ligase complement(3390701..3392611) Flavobacterium johnsoniae UW101 5090488 YP_001195200.1 CDS Fjoh_2860 NC_009441.1 3393112 3394581 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(3393112..3394581) Flavobacterium johnsoniae UW101 5090489 YP_001195201.1 CDS Fjoh_2861 NC_009441.1 3394660 3395181 R TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit complement(3394660..3395181) Flavobacterium johnsoniae UW101 5090490 YP_001195202.1 CDS Fjoh_2862 NC_009441.1 3395272 3396966 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; acetolactate synthase large subunit complement(3395272..3396966) Flavobacterium johnsoniae UW101 5090491 YP_001195203.1 CDS Fjoh_2863 NC_009441.1 3397030 3398703 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(3397030..3398703) Flavobacterium johnsoniae UW101 5090492 YP_001195204.1 CDS Fjoh_2864 NC_009441.1 3398973 3400091 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(3398973..3400091) Flavobacterium johnsoniae UW101 5090493 YP_001195205.1 CDS Fjoh_2865 NC_009441.1 3400160 3401341 R PFAM: pyruvate carboxyltransferase; pyruvate carboxyltransferase complement(3400160..3401341) Flavobacterium johnsoniae UW101 5090494 YP_001195206.1 CDS Fjoh_2866 NC_009441.1 3401491 3403035 D hypothetical protein 3401491..3403035 Flavobacterium johnsoniae UW101 5090495 YP_001195207.1 CDS Fjoh_2867 NC_009441.1 3403235 3404890 R PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase complement(3403235..3404890) Flavobacterium johnsoniae UW101 5090496 YP_001195208.1 CDS Fjoh_2868 NC_009441.1 3405047 3406702 R PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase complement(3405047..3406702) Flavobacterium johnsoniae UW101 5090497 YP_001195209.1 CDS Fjoh_2869 NC_009441.1 3406819 3407517 D hypothetical protein 3406819..3407517 Flavobacterium johnsoniae UW101 5090498 YP_001195210.1 CDS Fjoh_2870 NC_009441.1 3407543 3408151 R hypothetical protein complement(3407543..3408151) Flavobacterium johnsoniae UW101 5090499 YP_001195211.1 CDS Fjoh_2871 NC_009441.1 3408271 3408867 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase complement(3408271..3408867) Flavobacterium johnsoniae UW101 5090500 YP_001195212.1 CDS Fjoh_2872 NC_009441.1 3408959 3409714 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(3408959..3409714) Flavobacterium johnsoniae UW101 5090501 YP_001195213.1 CDS Fjoh_2873 NC_009441.1 3409791 3410513 R TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(3409791..3410513) Flavobacterium johnsoniae UW101 5092693 YP_001195214.1 CDS hisH NC_009441.1 3410607 3411188 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(3410607..3411188) Flavobacterium johnsoniae UW101 5092694 YP_001195215.1 CDS Fjoh_2875 NC_009441.1 3411292 3412428 R catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase complement(3411292..3412428) Flavobacterium johnsoniae UW101 5092695 YP_001195216.1 CDS Fjoh_2876 NC_009441.1 3412594 3413643 R TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; histidinol-phosphate aminotransferase complement(3412594..3413643) Flavobacterium johnsoniae UW101 5092696 YP_001195217.1 CDS hisD NC_009441.1 3413728 3415011 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(3413728..3415011) Flavobacterium johnsoniae UW101 5092697 YP_001195218.1 CDS hisG NC_009441.1 3415139 3415996 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(3415139..3415996) Flavobacterium johnsoniae UW101 5092698 YP_001195219.1 CDS Fjoh_2879 NC_009441.1 3416307 3417707 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(3416307..3417707) Flavobacterium johnsoniae UW101 5092699 YP_001195220.1 CDS Fjoh_2880 NC_009441.1 3417713 3418375 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(3417713..3418375) Flavobacterium johnsoniae UW101 5092700 YP_001195221.1 CDS Fjoh_2881 NC_009441.1 3418578 3420716 D PFAM: sulfatase; sulfatase 3418578..3420716 Flavobacterium johnsoniae UW101 5092701 YP_001195222.1 CDS Fjoh_2882 NC_009441.1 3420825 3421823 R hypothetical protein complement(3420825..3421823) Flavobacterium johnsoniae UW101 5092702 YP_001195223.1 CDS Fjoh_2883 NC_009441.1 3421999 3422949 D hypothetical protein 3421999..3422949 Flavobacterium johnsoniae UW101 5092703 YP_001195224.1 CDS Fjoh_2884 NC_009441.1 3422952 3423953 R PFAM: conserved hypothetical protein 698; hypothetical protein complement(3422952..3423953) Flavobacterium johnsoniae UW101 5092704 YP_001195225.1 CDS Fjoh_2885 NC_009441.1 3423992 3424888 R PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(3423992..3424888) Flavobacterium johnsoniae UW101 5092705 YP_001195226.1 CDS Fjoh_2886 NC_009441.1 3424959 3425705 R hypothetical protein complement(3424959..3425705) Flavobacterium johnsoniae UW101 5092706 YP_001195227.1 CDS Fjoh_2887 NC_009441.1 3425706 3426539 R hypothetical protein complement(3425706..3426539) Flavobacterium johnsoniae UW101 5092707 YP_001195228.1 CDS Fjoh_2888 NC_009441.1 3426604 3428631 R hypothetical protein complement(3426604..3428631) Flavobacterium johnsoniae UW101 5092708 YP_001195229.1 CDS Fjoh_2889 NC_009441.1 3428712 3429458 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; 3-oxoacyl-ACP reductase complement(3428712..3429458) Flavobacterium johnsoniae UW101 5092709 YP_001195230.1 CDS Fjoh_2890 NC_009441.1 3429716 3429925 R hypothetical protein complement(3429716..3429925) Flavobacterium johnsoniae UW101 5092710 YP_001195231.1 CDS Fjoh_2891 NC_009441.1 3430465 3431808 R hypothetical protein complement(3430465..3431808) Flavobacterium johnsoniae UW101 5092711 YP_001195232.1 CDS Fjoh_2892 NC_009441.1 3431842 3432708 R hypothetical protein complement(3431842..3432708) Flavobacterium johnsoniae UW101 5092712 YP_001195233.1 CDS Fjoh_2893 NC_009441.1 3432722 3434200 R hypothetical protein complement(3432722..3434200) Flavobacterium johnsoniae UW101 5092713 YP_001195234.1 CDS Fjoh_2894 NC_009441.1 3434212 3437925 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(3434212..3437925) Flavobacterium johnsoniae UW101 5092714 YP_001195235.1 CDS Fjoh_2895 NC_009441.1 3438269 3439342 R PFAM: FecR protein; FecR anti-FecI sigma factor complement(3438269..3439342) Flavobacterium johnsoniae UW101 5092715 YP_001195236.1 CDS Fjoh_2896 NC_009441.1 3439432 3440043 R PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(3439432..3440043) Flavobacterium johnsoniae UW101 5092716 YP_001195237.1 CDS Fjoh_2897 NC_009441.1 3440407 3440835 R hypothetical protein complement(3440407..3440835) Flavobacterium johnsoniae UW101 5092717 YP_001195238.1 CDS Fjoh_2898 NC_009441.1 3440987 3441859 R TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha complement(3440987..3441859) Flavobacterium johnsoniae UW101 5092718 YP_001195239.1 CDS Fjoh_2899 NC_009441.1 3441946 3442308 R hypothetical protein complement(3441946..3442308) Flavobacterium johnsoniae UW101 5092719 YP_001195240.1 CDS Fjoh_2900 NC_009441.1 3442310 3443239 R TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(3442310..3443239) Flavobacterium johnsoniae UW101 5092720 YP_001195241.1 CDS Fjoh_2901 NC_009441.1 3443361 3443927 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(3443361..3443927) Flavobacterium johnsoniae UW101 5092721 YP_001195242.1 CDS Fjoh_2902 NC_009441.1 3444071 3444856 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(3444071..3444856) Flavobacterium johnsoniae UW101 5092722 YP_001195243.1 CDS Fjoh_2903 NC_009441.1 3444927 3446324 R catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase complement(3444927..3446324) Flavobacterium johnsoniae UW101 5092723 YP_001195244.1 CDS lpxD NC_009441.1 3446308 3447351 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(3446308..3447351) Flavobacterium johnsoniae UW101 5092724 YP_001195245.1 CDS Fjoh_2905 NC_009441.1 3447391 3448620 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(3447391..3448620) Flavobacterium johnsoniae UW101 5092725 YP_001195246.1 CDS Fjoh_2906 NC_009441.1 3448843 3450396 D PFAM: response regulator receiver; PglZ domain; response regulator receiver protein 3448843..3450396 Flavobacterium johnsoniae UW101 5092726 YP_001195247.1 CDS Fjoh_2907 NC_009441.1 3450476 3450883 D PFAM: protein of unknown function UPF0079; hypothetical protein 3450476..3450883 Flavobacterium johnsoniae UW101 5092727 YP_001195248.1 CDS Fjoh_2908 NC_009441.1 3450888 3451658 D hypothetical protein 3450888..3451658 Flavobacterium johnsoniae UW101 5092728 YP_001195249.1 CDS Fjoh_2909 NC_009441.1 3451816 3453015 D PFAM: alanine dehydrogenase/PNT domain protein; NAD(P) transhydrogenase subunit alpha 3451816..3453015 Flavobacterium johnsoniae UW101 5092729 YP_001195250.1 CDS Fjoh_2910 NC_009441.1 3453052 3453426 D hypothetical protein 3453052..3453426 Flavobacterium johnsoniae UW101 5092730 YP_001195251.1 CDS Fjoh_2911 NC_009441.1 3453447 3454106 D hypothetical protein 3453447..3454106 Flavobacterium johnsoniae UW101 5092731 YP_001195252.1 CDS Fjoh_2912 NC_009441.1 3454130 3454795 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(3454130..3454795) Flavobacterium johnsoniae UW101 5092732 YP_001195253.1 CDS Fjoh_2913 NC_009441.1 3454929 3457094 D PFAM: DNA mismatch repair protein MutS domain protein; SMART: MutS III domain protein; DNA mismatch repair protein MutS domain-containing protein 3454929..3457094 Flavobacterium johnsoniae UW101 5092733 YP_001195254.1 CDS Fjoh_2914 NC_009441.1 3457410 3457715 D PFAM: Excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 3457410..3457715 Flavobacterium johnsoniae UW101 5092734 YP_001195255.1 CDS Fjoh_2915 NC_009441.1 3457729 3458172 D PFAM: thiol-disulphide oxidoreductase DCC; thiol-disulfide oxidoreductase DCC 3457729..3458172 Flavobacterium johnsoniae UW101 5092735 YP_001195256.1 CDS Fjoh_2916 NC_009441.1 3458407 3460098 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein complement(3458407..3460098) Flavobacterium johnsoniae UW101 5092736 YP_001195257.1 CDS Fjoh_2917 NC_009441.1 3460167 3460349 R hypothetical protein complement(3460167..3460349) Flavobacterium johnsoniae UW101 5092737 YP_001195258.1 CDS Fjoh_2918 NC_009441.1 3460414 3461418 R TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta complement(3460414..3461418) Flavobacterium johnsoniae UW101 5092738 YP_001195259.1 CDS Fjoh_2919 NC_009441.1 3461513 3461965 D hypothetical protein 3461513..3461965 Flavobacterium johnsoniae UW101 5092739 YP_001195260.1 CDS Fjoh_2920 NC_009441.1 3461980 3462999 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3461980..3462999 Flavobacterium johnsoniae UW101 5092740 YP_001195261.1 CDS Fjoh_2921 NC_009441.1 3463034 3463867 D PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 3463034..3463867 Flavobacterium johnsoniae UW101 5092741 YP_001195262.1 CDS Fjoh_2922 NC_009441.1 3464055 3464675 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; Sua5/YciO/YrdC/YwlC family protein complement(3464055..3464675) Flavobacterium johnsoniae UW101 5092742 YP_001195263.1 CDS Fjoh_2923 NC_009441.1 3464809 3465222 R hypothetical protein complement(3464809..3465222) Flavobacterium johnsoniae UW101 5092743 YP_001195264.1 CDS Fjoh_2924 NC_009441.1 3465224 3467560 R PFAM: UvrD/REP helicase; UvrD/REP helicase complement(3465224..3467560) Flavobacterium johnsoniae UW101 5092744 YP_001195265.1 CDS Fjoh_2925 NC_009441.1 3468036 3468803 R PFAM: protein of unknown function DUF81; hypothetical protein complement(3468036..3468803) Flavobacterium johnsoniae UW101 5092745 YP_001195266.1 CDS Fjoh_2926 NC_009441.1 3468928 3469449 D hypothetical protein 3468928..3469449 Flavobacterium johnsoniae UW101 5092746 YP_001195267.1 CDS Fjoh_2927 NC_009441.1 3469522 3470427 R PFAM: Patatin; patatin complement(3469522..3470427) Flavobacterium johnsoniae UW101 5092747 YP_001195268.1 CDS Fjoh_2928 NC_009441.1 3470461 3472521 R PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase complement(3470461..3472521) Flavobacterium johnsoniae UW101 5092748 YP_001195269.1 CDS Fjoh_2929 NC_009441.1 3472535 3473359 D TIGRFAM: ATP binding protein; PFAM: protein of unknown function DUF71, ATP-binding region; ATP-binding protein 3472535..3473359 Flavobacterium johnsoniae UW101 5091545 YP_001195270.1 CDS Fjoh_2930 NC_009441.1 3473359 3473754 D hypothetical protein 3473359..3473754 Flavobacterium johnsoniae UW101 5091546 YP_001195271.1 CDS Fjoh_2931 NC_009441.1 3473756 3474259 D hypothetical protein 3473756..3474259 Flavobacterium johnsoniae UW101 5091547 YP_001195272.1 CDS Fjoh_2932 NC_009441.1 3474263 3474655 R hypothetical protein complement(3474263..3474655) Flavobacterium johnsoniae UW101 5091548 YP_001195273.1 CDS Fjoh_2933 NC_009441.1 3474655 3475194 R PFAM: protein of unknown function DUF1697; hypothetical protein complement(3474655..3475194) Flavobacterium johnsoniae UW101 5091549 YP_001195274.1 CDS Fjoh_2934 NC_009441.1 3475223 3477064 R hypothetical protein complement(3475223..3477064) Flavobacterium johnsoniae UW101 5091550 YP_001195275.1 CDS Fjoh_2935 NC_009441.1 3477365 3479473 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 3477365..3479473 Flavobacterium johnsoniae UW101 5091551 YP_001195276.1 CDS Fjoh_2936 NC_009441.1 3479728 3480333 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS/PAC sensor protein complement(3479728..3480333) Flavobacterium johnsoniae UW101 5091552 YP_001195277.1 CDS Fjoh_2937 NC_009441.1 3480407 3481261 R hypothetical protein complement(3480407..3481261) Flavobacterium johnsoniae UW101 5091553 YP_001195278.1 CDS Fjoh_2938 NC_009441.1 3481290 3481889 R hypothetical protein complement(3481290..3481889) Flavobacterium johnsoniae UW101 5091554 YP_001195279.1 CDS Fjoh_2939 NC_009441.1 3482429 3483487 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3482429..3483487 Flavobacterium johnsoniae UW101 5091555 YP_001195280.1 CDS Fjoh_2940 NC_009441.1 3483581 3486679 D PFAM: acriflavin resistance protein; acriflavin resistance protein 3483581..3486679 Flavobacterium johnsoniae UW101 5091556 YP_001195281.1 CDS Fjoh_2941 NC_009441.1 3486742 3488052 D PFAM: outer membrane efflux protein; outer membrane efflux protein 3486742..3488052 Flavobacterium johnsoniae UW101 5091557 YP_001195282.1 CDS Fjoh_2942 NC_009441.1 3488079 3488942 D PFAM: protein of unknown function UPF0187; hypothetical protein 3488079..3488942 Flavobacterium johnsoniae UW101 5091558 YP_001195283.1 CDS Fjoh_2943 NC_009441.1 3489015 3489938 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 3489015..3489938 Flavobacterium johnsoniae UW101 5091559 YP_001195284.1 CDS Fjoh_2944 NC_009441.1 3490123 3490710 R PFAM: glutathione peroxidase; glutathione peroxidase complement(3490123..3490710) Flavobacterium johnsoniae UW101 5091560 YP_001195285.1 CDS Fjoh_2945 NC_009441.1 3491447 3491977 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; ECF subfamily RNA polymerase sigma-24 factor 3491447..3491977 Flavobacterium johnsoniae UW101 5091561 YP_001195286.1 CDS Fjoh_2946 NC_009441.1 3491977 3492765 D hypothetical protein 3491977..3492765 Flavobacterium johnsoniae UW101 5091562 YP_001195287.1 CDS Fjoh_2947 NC_009441.1 3492891 3493871 R hypothetical protein complement(3492891..3493871) Flavobacterium johnsoniae UW101 5091563 YP_001195288.1 CDS Fjoh_2948 NC_009441.1 3493945 3494700 R hypothetical protein complement(3493945..3494700) Flavobacterium johnsoniae UW101 5091564 YP_001195289.1 CDS Fjoh_2949 NC_009441.1 3494851 3495525 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(3494851..3495525) Flavobacterium johnsoniae UW101 5091565 YP_001195290.1 CDS Fjoh_2950 NC_009441.1 3495599 3496984 D PFAM: alpha/beta hydrolase fold; Antibiotic biosynthesis monooxygenase; alpha/beta hydrolase fold protein 3495599..3496984 Flavobacterium johnsoniae UW101 5091566 YP_001195291.1 CDS Fjoh_2951 NC_009441.1 3497042 3500266 R PFAM: cytochrome c assembly protein; cytochrome c assembly protein complement(3497042..3500266) Flavobacterium johnsoniae UW101 5091567 YP_001195292.1 CDS Fjoh_2952 NC_009441.1 3500537 3501298 D hypothetical protein 3500537..3501298 Flavobacterium johnsoniae UW101 5091568 YP_001195293.1 CDS Fjoh_2953 NC_009441.1 3501282 3501809 D TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3501282..3501809 Flavobacterium johnsoniae UW101 5091569 YP_001195294.1 CDS ubiA NC_009441.1 3501892 3502818 D UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 3501892..3502818 Flavobacterium johnsoniae UW101 5091570 YP_001195295.1 CDS Fjoh_2955 NC_009441.1 3502811 3503395 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 3502811..3503395 Flavobacterium johnsoniae UW101 5091571 YP_001195296.1 CDS Fjoh_2956 NC_009441.1 3503406 3503936 D hypothetical protein 3503406..3503936 Flavobacterium johnsoniae UW101 5091572 YP_001195297.1 CDS Fjoh_2957 NC_009441.1 3504049 3505149 D PFAM: protein of unknown function UPF0118; hypothetical protein 3504049..3505149 Flavobacterium johnsoniae UW101 5091573 YP_001195298.1 CDS Fjoh_2958 NC_009441.1 3505239 3507068 D hypothetical protein 3505239..3507068 Flavobacterium johnsoniae UW101 5091574 YP_001195299.1 CDS Fjoh_2959 NC_009441.1 3507264 3507779 D hypothetical protein 3507264..3507779 Flavobacterium johnsoniae UW101 5091575 YP_001195300.1 CDS Fjoh_2960 NC_009441.1 3507997 3509619 D PFAM: LVIVD repeat protein; LVIVD repeat-containing protein 3507997..3509619 Flavobacterium johnsoniae UW101 5091576 YP_001195301.1 CDS Fjoh_2961 NC_009441.1 3509806 3512337 D PFAM: LmbE family protein; LmbE family protein 3509806..3512337 Flavobacterium johnsoniae UW101 5091577 YP_001195302.1 CDS Fjoh_2962 NC_009441.1 3512460 3514184 D TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS family solute/sodium (Na+) symporter 3512460..3514184 Flavobacterium johnsoniae UW101 5091578 YP_001195303.1 CDS Fjoh_2963 NC_009441.1 3514402 3515031 D hypothetical protein 3514402..3515031 Flavobacterium johnsoniae UW101 5091579 YP_001195304.1 CDS Fjoh_2964 NC_009441.1 3515047 3515460 R PFAM: protein of unknown function DUF1348; hypothetical protein complement(3515047..3515460) Flavobacterium johnsoniae UW101 5091580 YP_001195305.1 CDS Fjoh_2965 NC_009441.1 3515460 3515987 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(3515460..3515987) Flavobacterium johnsoniae UW101 5091581 YP_001195306.1 CDS Fjoh_2966 NC_009441.1 3516207 3516581 R hypothetical protein complement(3516207..3516581) Flavobacterium johnsoniae UW101 5091582 YP_001195307.1 CDS Fjoh_2967 NC_009441.1 3516649 3518154 R PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase complement(3516649..3518154) Flavobacterium johnsoniae UW101 5091583 YP_001195308.1 CDS pheT NC_009441.1 3518428 3520848 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 3518428..3520848 Flavobacterium johnsoniae UW101 5091584 YP_001195309.1 CDS Fjoh_2969 NC_009441.1 3520913 3521737 R PFAM: Peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein complement(3520913..3521737) Flavobacterium johnsoniae UW101 5091585 YP_001195310.1 CDS Fjoh_2970 NC_009441.1 3522077 3522511 D hypothetical protein 3522077..3522511 Flavobacterium johnsoniae UW101 5091586 YP_001195311.1 CDS Fjoh_2971 NC_009441.1 3522519 3523166 D hypothetical protein 3522519..3523166 Flavobacterium johnsoniae UW101 5091587 YP_001195312.1 CDS Fjoh_2972 NC_009441.1 3523139 3523915 D PFAM: ATP-binding region, ATPase domain protein domain protein; signal transduction histidine kinase 3523139..3523915 Flavobacterium johnsoniae UW101 5091588 YP_001195313.1 CDS Fjoh_2973 NC_009441.1 3523912 3524562 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 3523912..3524562 Flavobacterium johnsoniae UW101 5091589 YP_001195314.1 CDS Fjoh_2974 NC_009441.1 3524563 3525075 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3524563..3525075) Flavobacterium johnsoniae UW101 5091590 YP_001195315.1 CDS Fjoh_2975 NC_009441.1 3525229 3526779 R PFAM: Resolvase, N-terminal domain; Recombinase; resolvase domain-containing protein complement(3525229..3526779) Flavobacterium johnsoniae UW101 5092499 YP_001195316.1 CDS Fjoh_2976 NC_009441.1 3527150 3527620 D hypothetical protein 3527150..3527620 Flavobacterium johnsoniae UW101 5091592 YP_001195317.1 CDS Fjoh_2977 NC_009441.1 3528035 3528874 D hypothetical protein 3528035..3528874 Flavobacterium johnsoniae UW101 5091593 YP_001195318.1 CDS Fjoh_2978 NC_009441.1 3528932 3530527 R hypothetical protein complement(3528932..3530527) Flavobacterium johnsoniae UW101 5091594 YP_001195319.1 CDS Fjoh_2979 NC_009441.1 3531151 3531543 D TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 3531151..3531543 Flavobacterium johnsoniae UW101 5091595 YP_001195320.1 CDS Fjoh_2980 NC_009441.1 3531591 3532664 D hypothetical protein 3531591..3532664 Flavobacterium johnsoniae UW101 5091596 YP_001195321.1 CDS Fjoh_2981 NC_009441.1 3532754 3533170 D hypothetical protein 3532754..3533170 Flavobacterium johnsoniae UW101 5091597 YP_001195322.1 CDS Fjoh_2982 NC_009441.1 3533167 3533406 D hypothetical protein 3533167..3533406 Flavobacterium johnsoniae UW101 5091598 YP_001195323.1 CDS Fjoh_2983 NC_009441.1 3533418 3533636 D hypothetical protein 3533418..3533636 Flavobacterium johnsoniae UW101 5091599 YP_001195324.1 CDS Fjoh_2984 NC_009441.1 3533902 3534828 D hypothetical protein 3533902..3534828 Flavobacterium johnsoniae UW101 5090335 YP_001195325.1 CDS Fjoh_2985 NC_009441.1 3534821 3535549 D hypothetical protein 3534821..3535549 Flavobacterium johnsoniae UW101 5090336 YP_001195326.1 CDS Fjoh_2986 NC_009441.1 3535546 3536352 D PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 3535546..3536352 Flavobacterium johnsoniae UW101 5090337 YP_001195327.1 CDS Fjoh_2987 NC_009441.1 3536692 3537021 D PFAM: regulatory protein, ArsR; regulatory protein ArsR 3536692..3537021 Flavobacterium johnsoniae UW101 5090338 YP_001195328.1 CDS Fjoh_2988 NC_009441.1 3537079 3537546 D hypothetical protein 3537079..3537546 Flavobacterium johnsoniae UW101 5090339 YP_001195329.1 CDS Fjoh_2989 NC_009441.1 3537568 3538188 D PFAM: Methyltransferase type 12; type 12 methyltransferase 3537568..3538188 Flavobacterium johnsoniae UW101 5090340 YP_001195330.1 CDS Fjoh_2990 NC_009441.1 3538199 3538810 D protein tyrosine phosphatase 3538199..3538810 Flavobacterium johnsoniae UW101 5090341 YP_001195331.1 CDS Fjoh_2991 NC_009441.1 3538814 3539845 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 3538814..3539845 Flavobacterium johnsoniae UW101 5090342 YP_001195332.1 CDS Fjoh_2992 NC_009441.1 3539880 3540680 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 3539880..3540680 Flavobacterium johnsoniae UW101 5090343 YP_001195333.1 CDS Fjoh_2993 NC_009441.1 3540761 3541234 D hypothetical protein 3540761..3541234 Flavobacterium johnsoniae UW101 5090344 YP_001195334.1 CDS Fjoh_2994 NC_009441.1 3541315 3541833 D PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 3541315..3541833 Flavobacterium johnsoniae UW101 5090345 YP_001195335.1 CDS Fjoh_2995 NC_009441.1 3541814 3542245 D PFAM: DoxX family protein; DoxX family protein 3541814..3542245 Flavobacterium johnsoniae UW101 5090346 YP_001195336.1 CDS Fjoh_2996 NC_009441.1 3542235 3543365 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; chromate transporter 3542235..3543365 Flavobacterium johnsoniae UW101 5090347 YP_001195337.1 CDS Fjoh_2997 NC_009441.1 3543566 3544606 R PFAM: transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(3543566..3544606) Flavobacterium johnsoniae UW101 5090348 YP_001195338.1 CDS Fjoh_2998 NC_009441.1 3544917 3545492 D hypothetical protein 3544917..3545492 Flavobacterium johnsoniae UW101 5090349 YP_001195339.1 CDS Fjoh_2999 NC_009441.1 3545664 3546524 R hypothetical protein complement(3545664..3546524) Flavobacterium johnsoniae UW101 5090350 YP_001195340.1 CDS Fjoh_3000 NC_009441.1 3546544 3547866 R hypothetical protein complement(3546544..3547866) Flavobacterium johnsoniae UW101 5090351 YP_001195341.1 CDS Fjoh_3001 NC_009441.1 3548606 3549229 R hypothetical protein complement(3548606..3549229) Flavobacterium johnsoniae UW101 5090352 YP_001195342.1 CDS Fjoh_3002 NC_009441.1 3549251 3550249 R PFAM: TraJ family protein conjugative transposon; TraJ family protein conjugative transposon complement(3549251..3550249) Flavobacterium johnsoniae UW101 5090353 YP_001195343.1 CDS Fjoh_3003 NC_009441.1 3550252 3550884 R hypothetical protein complement(3550252..3550884) Flavobacterium johnsoniae UW101 5090354 YP_001195344.1 CDS Fjoh_3004 NC_009441.1 3550902 3553415 R Type IV secretory pathway VirB4 components-like protein complement(3550902..3553415) Flavobacterium johnsoniae UW101 5090355 YP_001195345.1 CDS Fjoh_3005 NC_009441.1 3553412 3553756 R hypothetical protein complement(3553412..3553756) Flavobacterium johnsoniae UW101 5090356 YP_001195346.1 CDS Fjoh_3006 NC_009441.1 3553756 3554139 R hypothetical protein complement(3553756..3554139) Flavobacterium johnsoniae UW101 5090357 YP_001195347.1 CDS Fjoh_3007 NC_009441.1 3554237 3555373 D PFAM: aminotransferase, class V; class V aminotransferase 3554237..3555373 Flavobacterium johnsoniae UW101 5090358 YP_001195348.1 CDS Fjoh_3008 NC_009441.1 3555442 3557190 D hypothetical protein 3555442..3557190 Flavobacterium johnsoniae UW101 5090359 YP_001195349.1 CDS Fjoh_3009 NC_009441.1 3557187 3558416 D hypothetical protein 3557187..3558416 Flavobacterium johnsoniae UW101 5090360 YP_001195350.1 CDS Fjoh_3010 NC_009441.1 3558521 3560902 D hypothetical protein 3558521..3560902 Flavobacterium johnsoniae UW101 5090361 YP_001195351.1 CDS Fjoh_3011 NC_009441.1 3561019 3562125 R PFAM: phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase complement(3561019..3562125) Flavobacterium johnsoniae UW101 5090362 YP_001195352.1 CDS Fjoh_3012 NC_009441.1 3562125 3565340 R hypothetical protein complement(3562125..3565340) Flavobacterium johnsoniae UW101 5090363 YP_001195353.1 CDS Fjoh_3013 NC_009441.1 3565330 3566226 R hypothetical protein complement(3565330..3566226) Flavobacterium johnsoniae UW101 5090364 YP_001195354.1 CDS Fjoh_3014 NC_009441.1 3566329 3566961 R hypothetical protein complement(3566329..3566961) Flavobacterium johnsoniae UW101 5090365 YP_001195355.1 CDS Fjoh_3015 NC_009441.1 3566963 3567373 R hypothetical protein complement(3566963..3567373) Flavobacterium johnsoniae UW101 5090366 YP_001195356.1 CDS Fjoh_3016 NC_009441.1 3567378 3568145 R chromosome partitioning ATPase complement(3567378..3568145) Flavobacterium johnsoniae UW101 5090367 YP_001195357.1 CDS Fjoh_3017 NC_009441.1 3568882 3569280 D hypothetical protein 3568882..3569280 Flavobacterium johnsoniae UW101 5090368 YP_001195358.1 CDS Fjoh_3018 NC_009441.1 3569277 3570557 D PFAM: Relaxase/mobilization nuclease; relaxase/mobilization nuclease 3569277..3570557 Flavobacterium johnsoniae UW101 5090369 YP_001195359.1 CDS Fjoh_3019 NC_009441.1 3570588 3572672 D hypothetical protein 3570588..3572672 Flavobacterium johnsoniae UW101 5090370 YP_001195360.1 CDS Fjoh_3020 NC_009441.1 3572760 3573896 R PFAM: protein of unknown function DUF1016; hypothetical protein complement(3572760..3573896) Flavobacterium johnsoniae UW101 5090371 YP_001195361.1 CDS Fjoh_3021 NC_009441.1 3573959 3576028 R PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; DNA topoisomerase complement(3573959..3576028) Flavobacterium johnsoniae UW101 5090372 YP_001195362.1 CDS Fjoh_3022 NC_009441.1 3576035 3577489 R hypothetical protein complement(3576035..3577489) Flavobacterium johnsoniae UW101 5090373 YP_001195363.1 CDS Fjoh_3023 NC_009441.1 3577568 3577879 R hypothetical protein complement(3577568..3577879) Flavobacterium johnsoniae UW101 5090374 YP_001195364.1 CDS Fjoh_3024 NC_009441.1 3578109 3579026 R hypothetical protein complement(3578109..3579026) Flavobacterium johnsoniae UW101 5090375 YP_001195365.1 CDS Fjoh_3025 NC_009441.1 3579129 3579977 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(3579129..3579977) Flavobacterium johnsoniae UW101 5090376 YP_001195366.1 CDS Fjoh_3026 NC_009441.1 3580026 3580274 R hypothetical protein complement(3580026..3580274) Flavobacterium johnsoniae UW101 5090377 YP_001195367.1 CDS Fjoh_3027 NC_009441.1 3580289 3580996 R hypothetical protein complement(3580289..3580996) Flavobacterium johnsoniae UW101 5090378 YP_001195368.1 CDS Fjoh_3028 NC_009441.1 3581338 3583014 D PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: helix-turn-helix- domain containing protein, AraC type; response regulator receiver protein 3581338..3583014 Flavobacterium johnsoniae UW101 5090379 YP_001195369.1 CDS Fjoh_3029 NC_009441.1 3583100 3584158 R hypothetical protein complement(3583100..3584158) Flavobacterium johnsoniae UW101 5090380 YP_001195370.1 CDS Fjoh_3030 NC_009441.1 3584197 3585180 R hypothetical protein complement(3584197..3585180) Flavobacterium johnsoniae UW101 5090381 YP_001195371.1 CDS Fjoh_3031 NC_009441.1 3585206 3585952 R hypothetical protein complement(3585206..3585952) Flavobacterium johnsoniae UW101 5090382 YP_001195372.1 CDS Fjoh_3032 NC_009441.1 3585980 3586918 R e14 prophage; cell death peptidase; inhibitor of T4 late gene expression; late inhibitor of T4; phage exclusion protein Lit complement(3585980..3586918) Flavobacterium johnsoniae UW101 5090383 YP_001195373.1 CDS Fjoh_3033 NC_009441.1 3587142 3588260 R hypothetical protein complement(3587142..3588260) Flavobacterium johnsoniae UW101 5090384 YP_001195374.1 CDS Fjoh_3034 NC_009441.1 3588528 3588776 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(3588528..3588776) Flavobacterium johnsoniae UW101 5090385 YP_001195375.1 CDS Fjoh_3035 NC_009441.1 3589451 3592474 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 3589451..3592474 Flavobacterium johnsoniae UW101 5090386 YP_001195376.1 CDS Fjoh_3036 NC_009441.1 3592475 3593890 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3592475..3593890 Flavobacterium johnsoniae UW101 5090387 YP_001195377.1 CDS Fjoh_3037 NC_009441.1 3594028 3596571 D PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 3594028..3596571 Flavobacterium johnsoniae UW101 5090388 YP_001195378.1 CDS Fjoh_3038 NC_009441.1 3597020 3598531 R hypothetical protein complement(3597020..3598531) Flavobacterium johnsoniae UW101 5090389 YP_001195379.1 CDS Fjoh_3039 NC_009441.1 3598903 3599199 D hypothetical protein 3598903..3599199 Flavobacterium johnsoniae UW101 5090390 YP_001195380.1 CDS Fjoh_3041 NC_009441.1 3600240 3605360 R SMART: AAA ATPase; ATPase AAA complement(3600240..3605360) Flavobacterium johnsoniae UW101 5092500 YP_001195381.1 CDS Fjoh_3042 NC_009441.1 3605357 3606403 R hypothetical protein complement(3605357..3606403) Flavobacterium johnsoniae UW101 5093572 YP_001195382.1 CDS Fjoh_3043 NC_009441.1 3606606 3606971 R hypothetical protein complement(3606606..3606971) Flavobacterium johnsoniae UW101 5093573 YP_001195383.1 CDS Fjoh_3044 NC_009441.1 3607182 3607427 R hypothetical protein complement(3607182..3607427) Flavobacterium johnsoniae UW101 5093574 YP_001195384.1 CDS Fjoh_3045 NC_009441.1 3607615 3608877 R PFAM: natural resistance-associated macrophage protein; natural resistance-associated macrophage protein complement(3607615..3608877) Flavobacterium johnsoniae UW101 5093575 YP_001195385.1 CDS Fjoh_3046 NC_009441.1 3609949 3610848 D PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 3609949..3610848 Flavobacterium johnsoniae UW101 5093576 YP_001195386.1 CDS Fjoh_3047 NC_009441.1 3610835 3612355 D attaches phosphoethanolamine to lipid A at the 1 position of the disaccharide backbone in contrast to other gram-negative bacteria; lipid A phosphoethanolamine transferase 3610835..3612355 Flavobacterium johnsoniae UW101 5093577 YP_001195387.1 CDS Fjoh_3048 NC_009441.1 3612393 3613043 D PFAM: protein of unknown function DUF1345; hypothetical protein 3612393..3613043 Flavobacterium johnsoniae UW101 5093578 YP_001195388.1 CDS Fjoh_3049 NC_009441.1 3613361 3614035 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 3613361..3614035 Flavobacterium johnsoniae UW101 5093579 YP_001195389.1 CDS Fjoh_3050 NC_009441.1 3614023 3615297 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 3614023..3615297 Flavobacterium johnsoniae UW101 5093580 YP_001195390.1 CDS Fjoh_3051 NC_009441.1 3615467 3617425 D PFAM: sulfatase; sulfatase 3615467..3617425 Flavobacterium johnsoniae UW101 5093581 YP_001195391.1 CDS Fjoh_3052 NC_009441.1 3617483 3618307 D PFAM: diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 3617483..3618307 Flavobacterium johnsoniae UW101 5093582 YP_001195392.1 CDS Fjoh_3055 NC_009441.1 3620826 3621260 R hypothetical protein complement(3620826..3621260) Flavobacterium johnsoniae UW101 5092502 YP_001195393.1 CDS Fjoh_3056 NC_009441.1 3621241 3622419 R PFAM: UBA/THIF-type NAD/FAD binding protein; hypothetical protein complement(3621241..3622419) Flavobacterium johnsoniae UW101 5093584 YP_001195394.1 CDS Fjoh_3057 NC_009441.1 3622394 3623113 R hypothetical protein complement(3622394..3623113) Flavobacterium johnsoniae UW101 5093585 YP_001195395.1 CDS Fjoh_3058 NC_009441.1 3623365 3625737 R hypothetical protein complement(3623365..3625737) Flavobacterium johnsoniae UW101 5093586 YP_001195396.1 CDS Fjoh_3059 NC_009441.1 3625745 3626836 R PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; ATPase central domain-containing protein complement(3625745..3626836) Flavobacterium johnsoniae UW101 5093587 YP_001195397.1 CDS Fjoh_3060 NC_009441.1 3627438 3627830 D PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein/primosomal replication protein n 3627438..3627830 Flavobacterium johnsoniae UW101 5093588 YP_001195398.1 CDS Fjoh_3061 NC_009441.1 3627875 3628237 D hypothetical protein 3627875..3628237 Flavobacterium johnsoniae UW101 5093589 YP_001195399.1 CDS Fjoh_3062 NC_009441.1 3628261 3628644 D hypothetical protein 3628261..3628644 Flavobacterium johnsoniae UW101 5093590 YP_001195400.1 CDS Fjoh_3063 NC_009441.1 3628641 3629948 D hypothetical protein 3628641..3629948 Flavobacterium johnsoniae UW101 5093591 YP_001195401.1 CDS Fjoh_3064 NC_009441.1 3630744 3631595 D hypothetical protein 3630744..3631595 Flavobacterium johnsoniae UW101 5093592 YP_001195402.1 CDS Fjoh_3065 NC_009441.1 3631610 3632680 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; YVTN beta-propeller repeat-containing protein 3631610..3632680 Flavobacterium johnsoniae UW101 5093593 YP_001195403.1 CDS Fjoh_3066 NC_009441.1 3632812 3633504 D hypothetical protein 3632812..3633504 Flavobacterium johnsoniae UW101 5093594 YP_001195404.1 CDS Fjoh_3067 NC_009441.1 3633744 3634256 D hypothetical protein 3633744..3634256 Flavobacterium johnsoniae UW101 5093595 YP_001195405.1 CDS Fjoh_3068 NC_009441.1 3634258 3634728 D hypothetical protein 3634258..3634728 Flavobacterium johnsoniae UW101 5093596 YP_001195406.1 CDS Fjoh_3070 NC_009441.1 3637951 3639198 D hypothetical protein 3637951..3639198 Flavobacterium johnsoniae UW101 5092503 YP_001195407.1 CDS Fjoh_3071 NC_009441.1 3639176 3640516 D hypothetical protein 3639176..3640516 Flavobacterium johnsoniae UW101 5093598 YP_001195408.1 CDS Fjoh_3072 NC_009441.1 3640520 3641734 D TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3640520..3641734 Flavobacterium johnsoniae UW101 5093599 YP_001195409.1 CDS Fjoh_3073 NC_009441.1 3641753 3642292 D hypothetical protein 3641753..3642292 Flavobacterium johnsoniae UW101 5093600 YP_001195410.1 CDS Fjoh_3074 NC_009441.1 3642379 3644916 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase 3642379..3644916 Flavobacterium johnsoniae UW101 5093601 YP_001195411.1 CDS Fjoh_3075 NC_009441.1 3644945 3646189 D hypothetical protein 3644945..3646189 Flavobacterium johnsoniae UW101 5093602 YP_001195412.1 CDS Fjoh_3076 NC_009441.1 3646202 3647074 D hypothetical protein 3646202..3647074 Flavobacterium johnsoniae UW101 5093603 YP_001195413.1 CDS Fjoh_3077 NC_009441.1 3647217 3647711 D PFAM: protein of unknown function DUF305; hypothetical protein 3647217..3647711 Flavobacterium johnsoniae UW101 5093604 YP_001195414.1 CDS Fjoh_3078 NC_009441.1 3647739 3650354 D PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; multicopper oxidase, type 3 3647739..3650354 Flavobacterium johnsoniae UW101 5093605 YP_001195415.1 CDS Fjoh_3079 NC_009441.1 3650820 3651152 D PFAM: regulatory protein, ArsR; regulatory protein ArsR 3650820..3651152 Flavobacterium johnsoniae UW101 5093606 YP_001195416.1 CDS Fjoh_3080 NC_009441.1 3651143 3651649 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3651143..3651649 Flavobacterium johnsoniae UW101 5093607 YP_001195417.1 CDS Fjoh_3081 NC_009441.1 3651683 3652156 D hypothetical protein 3651683..3652156 Flavobacterium johnsoniae UW101 5093608 YP_001195418.1 CDS Fjoh_3082 NC_009441.1 3652199 3652813 D protein tyrosine phosphatase 3652199..3652813 Flavobacterium johnsoniae UW101 5093609 YP_001195419.1 CDS Fjoh_3083 NC_009441.1 3652815 3653900 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 3652815..3653900 Flavobacterium johnsoniae UW101 5093610 YP_001195420.1 CDS Fjoh_3084 NC_009441.1 3653907 3654641 D PFAM: metallophosphoesterase; metallophosphoesterase 3653907..3654641 Flavobacterium johnsoniae UW101 5093611 YP_001195421.1 CDS Fjoh_3085 NC_009441.1 3654663 3655235 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 3654663..3655235 Flavobacterium johnsoniae UW101 5093612 YP_001195422.1 CDS Fjoh_3086 NC_009441.1 3655309 3655872 D hypothetical protein 3655309..3655872 Flavobacterium johnsoniae UW101 5093613 YP_001195423.1 CDS Fjoh_3087 NC_009441.1 3655906 3656469 D PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 3655906..3656469 Flavobacterium johnsoniae UW101 5093614 YP_001195424.1 CDS Fjoh_3088 NC_009441.1 3656906 3657280 D PFAM: regulatory protein, MarR; regulatory protein, ArsR; regulatory protein ArsR 3656906..3657280 Flavobacterium johnsoniae UW101 5093615 YP_001195425.1 CDS Fjoh_3089 NC_009441.1 3657277 3657876 D PFAM: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 3657277..3657876 Flavobacterium johnsoniae UW101 5093616 YP_001195426.1 CDS Fjoh_3090 NC_009441.1 3657873 3658079 D hypothetical protein 3657873..3658079 Flavobacterium johnsoniae UW101 5093617 YP_001195427.1 CDS Fjoh_3091 NC_009441.1 3658643 3658966 D hypothetical protein 3658643..3658966 Flavobacterium johnsoniae UW101 5093618 YP_001195428.1 CDS Fjoh_3092 NC_009441.1 3659040 3661220 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 3659040..3661220 Flavobacterium johnsoniae UW101 5093619 YP_001195429.1 CDS Fjoh_3093 NC_009441.1 3661195 3662013 D PFAM: cation efflux protein; cation efflux protein 3661195..3662013 Flavobacterium johnsoniae UW101 5093620 YP_001195430.1 CDS Fjoh_3094 NC_009441.1 3662370 3663086 D hypothetical protein 3662370..3663086 Flavobacterium johnsoniae UW101 5093621 YP_001195431.1 CDS Fjoh_3095 NC_009441.1 3663183 3663674 D hypothetical protein 3663183..3663674 Flavobacterium johnsoniae UW101 5093622 YP_001195432.1 CDS Fjoh_3096 NC_009441.1 3664504 3665325 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(3664504..3665325) Flavobacterium johnsoniae UW101 5093623 YP_001195433.1 CDS Fjoh_3097 NC_009441.1 3665442 3666668 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 3665442..3666668 Flavobacterium johnsoniae UW101 5093624 YP_001195434.1 CDS Fjoh_3098 NC_009441.1 3666737 3667777 D alpha/beta fold family hydrolase-like protein 3666737..3667777 Flavobacterium johnsoniae UW101 5093625 YP_001195435.1 CDS Fjoh_3099 NC_009441.1 3668618 3669061 R PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator complement(3668618..3669061) Flavobacterium johnsoniae UW101 5093626 YP_001195436.1 CDS Fjoh_3100 NC_009441.1 3669140 3669943 D PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 3669140..3669943 Flavobacterium johnsoniae UW101 5093096 YP_001195437.1 CDS Fjoh_3101 NC_009441.1 3669948 3670949 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 3669948..3670949 Flavobacterium johnsoniae UW101 5093097 YP_001195438.1 CDS Fjoh_3102 NC_009441.1 3671537 3672415 R PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(3671537..3672415) Flavobacterium johnsoniae UW101 5093098 YP_001195439.1 CDS Fjoh_3103 NC_009441.1 3672555 3672893 D PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 3672555..3672893 Flavobacterium johnsoniae UW101 5093099 YP_001195440.1 CDS Fjoh_3104 NC_009441.1 3672967 3673524 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 3672967..3673524 Flavobacterium johnsoniae UW101 5093100 YP_001195441.1 CDS Fjoh_3105 NC_009441.1 3673586 3674461 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 3673586..3674461 Flavobacterium johnsoniae UW101 5093101 YP_001195442.1 CDS Fjoh_3106 NC_009441.1 3674584 3674949 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(3674584..3674949) Flavobacterium johnsoniae UW101 5093102 YP_001195443.1 CDS Fjoh_3107 NC_009441.1 3675054 3675680 R PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(3675054..3675680) Flavobacterium johnsoniae UW101 5093103 YP_001195444.1 CDS Fjoh_3108 NC_009441.1 3676212 3677048 D hypothetical protein 3676212..3677048 Flavobacterium johnsoniae UW101 5093104 YP_001195445.1 CDS Fjoh_3109 NC_009441.1 3677164 3679098 R PFAM: glycoside hydrolase, family 43; Glycosyl hydrolase family 32, N terminal domain protein; glycoside hydrolase complement(3677164..3679098) Flavobacterium johnsoniae UW101 5093105 YP_001195446.1 CDS Fjoh_3110 NC_009441.1 3679098 3680459 R hypothetical protein complement(3679098..3680459) Flavobacterium johnsoniae UW101 5093106 YP_001195447.1 CDS Fjoh_3111 NC_009441.1 3680580 3683000 R PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase complement(3680580..3683000) Flavobacterium johnsoniae UW101 5093107 YP_001195448.1 CDS Fjoh_3112 NC_009441.1 3683032 3685500 R hypothetical protein complement(3683032..3685500) Flavobacterium johnsoniae UW101 5093108 YP_001195449.1 CDS Fjoh_3113 NC_009441.1 3685564 3687549 R PFAM: Carbohydrate-binding, CenC domain protein domain protein; alpha-L-arabinofuranosidase domain protein; alpha-N-arabinofuranosidase complement(3685564..3687549) Flavobacterium johnsoniae UW101 5093109 YP_001195450.1 CDS Fjoh_3114 NC_009441.1 3687574 3689013 R PFAM: glycoside hydrolase, family 28; glycoside hydrolase complement(3687574..3689013) Flavobacterium johnsoniae UW101 5093110 YP_001195451.1 CDS Fjoh_3115 NC_009441.1 3689225 3690754 R PFAM: glycoside hydrolase, family 28; glycoside hydrolase complement(3689225..3690754) Flavobacterium johnsoniae UW101 5093111 YP_001195452.1 CDS Fjoh_3116 NC_009441.1 3690931 3692499 R TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS family solute/sodium (Na+) symporter complement(3690931..3692499) Flavobacterium johnsoniae UW101 5093112 YP_001195453.1 CDS Fjoh_3117 NC_009441.1 3692795 3693937 R hypothetical protein complement(3692795..3693937) Flavobacterium johnsoniae UW101 5093113 YP_001195454.1 CDS Fjoh_3118 NC_009441.1 3694041 3697172 R PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase complement(3694041..3697172) Flavobacterium johnsoniae UW101 5093114 YP_001195455.1 CDS Fjoh_3119 NC_009441.1 3697357 3698244 R PFAM: Protein of unknown function DUF706; inositol oxygenase complement(3697357..3698244) Flavobacterium johnsoniae UW101 5093115 YP_001195456.1 CDS Fjoh_3120 NC_009441.1 3698566 3702600 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase complement(3698566..3702600) Flavobacterium johnsoniae UW101 5093116 YP_001195457.1 CDS Fjoh_3121 NC_009441.1 3702653 3704482 R PFAM: metallophosphoesterase; metallophosphoesterase complement(3702653..3704482) Flavobacterium johnsoniae UW101 5093117 YP_001195458.1 CDS Fjoh_3122 NC_009441.1 3704707 3705558 R hypothetical protein complement(3704707..3705558) Flavobacterium johnsoniae UW101 5093118 YP_001195459.1 CDS Fjoh_3123 NC_009441.1 3705842 3706417 R hypothetical protein complement(3705842..3706417) Flavobacterium johnsoniae UW101 5093119 YP_001195460.1 CDS Fjoh_3124 NC_009441.1 3706420 3708693 R TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; alpha-1,2-mannosidase complement(3706420..3708693) Flavobacterium johnsoniae UW101 5093120 YP_001195461.1 CDS Fjoh_3125 NC_009441.1 3708706 3711012 R TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; alpha-1,2-mannosidase complement(3708706..3711012) Flavobacterium johnsoniae UW101 5093121 YP_001195462.1 CDS Fjoh_3126 NC_009441.1 3711351 3712964 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(3711351..3712964) Flavobacterium johnsoniae UW101 5093122 YP_001195463.1 CDS Fjoh_3127 NC_009441.1 3712984 3715995 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(3712984..3715995) Flavobacterium johnsoniae UW101 5093123 YP_001195464.1 CDS Fjoh_3128 NC_009441.1 3716287 3718458 R PFAM: alpha-N-acetylglucosaminidase; alpha-N-acetylglucosaminidase complement(3716287..3718458) Flavobacterium johnsoniae UW101 5093124 YP_001195465.1 CDS Fjoh_3129 NC_009441.1 3719173 3719475 R hypothetical protein complement(3719173..3719475) Flavobacterium johnsoniae UW101 5093125 YP_001195466.1 CDS Fjoh_3130 NC_009441.1 3719656 3721374 R hypothetical protein complement(3719656..3721374) Flavobacterium johnsoniae UW101 5093126 YP_001195467.1 CDS Fjoh_3131 NC_009441.1 3721781 3722287 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 3721781..3722287 Flavobacterium johnsoniae UW101 5093127 YP_001195468.1 CDS Fjoh_3132 NC_009441.1 3722344 3722904 D hypothetical protein 3722344..3722904 Flavobacterium johnsoniae UW101 5093128 YP_001195469.1 CDS Fjoh_3133 NC_009441.1 3722936 3724567 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3722936..3724567) Flavobacterium johnsoniae UW101 5093129 YP_001195470.1 CDS Fjoh_3134 NC_009441.1 3724573 3725586 R PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; anti-sigma regulatory factor, serine/threonine protein kinase complement(3724573..3725586) Flavobacterium johnsoniae UW101 5093130 YP_001195471.1 CDS Fjoh_3135 NC_009441.1 3725579 3725992 R PFAM: ATP-binding region, ATPase domain protein domain protein; anti-sigma regulatory factor, serine/threonine protein kinase complement(3725579..3725992) Flavobacterium johnsoniae UW101 5093131 YP_001195472.1 CDS Fjoh_3136 NC_009441.1 3725973 3726371 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(3725973..3726371) Flavobacterium johnsoniae UW101 5093132 YP_001195473.1 CDS Fjoh_3137 NC_009441.1 3726390 3727241 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(3726390..3727241) Flavobacterium johnsoniae UW101 5093133 YP_001195474.1 CDS Fjoh_3138 NC_009441.1 3727348 3728043 R hypothetical protein complement(3727348..3728043) Flavobacterium johnsoniae UW101 5093134 YP_001195475.1 CDS Fjoh_3139 NC_009441.1 3728030 3728209 R hypothetical protein complement(3728030..3728209) Flavobacterium johnsoniae UW101 5093135 YP_001195476.1 CDS Fjoh_3140 NC_009441.1 3728514 3730655 D PFAM: Catalase domain protein; catalase 3728514..3730655 Flavobacterium johnsoniae UW101 5093136 YP_001195477.1 CDS Fjoh_3141 NC_009441.1 3730673 3731242 D PFAM: protein of unknown function DUF892; hypothetical protein 3730673..3731242 Flavobacterium johnsoniae UW101 5093137 YP_001195478.1 CDS Fjoh_3142 NC_009441.1 3731528 3733102 R PFAM: sulfatase; sulfatase complement(3731528..3733102) Flavobacterium johnsoniae UW101 5093138 YP_001195479.1 CDS Fjoh_3143 NC_009441.1 3733139 3735511 R PFAM: sulfatase; sulfatase complement(3733139..3735511) Flavobacterium johnsoniae UW101 5093139 YP_001195480.1 CDS Fjoh_3144 NC_009441.1 3735605 3736168 R hypothetical protein complement(3735605..3736168) Flavobacterium johnsoniae UW101 5093140 YP_001195481.1 CDS Fjoh_3145 NC_009441.1 3736350 3736763 D hypothetical protein 3736350..3736763 Flavobacterium johnsoniae UW101 5093141 YP_001195482.1 CDS Fjoh_3146 NC_009441.1 3736916 3740617 R hypothetical protein complement(3736916..3740617) Flavobacterium johnsoniae UW101 5093142 YP_001195483.1 CDS Fjoh_3147 NC_009441.1 3740919 3742343 R PFAM: amino acid permease-associated region; amino acid permease complement(3740919..3742343) Flavobacterium johnsoniae UW101 5093143 YP_001195484.1 CDS Fjoh_3148 NC_009441.1 3742714 3743316 D hypothetical protein 3742714..3743316 Flavobacterium johnsoniae UW101 5093144 YP_001195485.1 CDS Fjoh_3149 NC_009441.1 3743313 3744149 D hypothetical protein 3743313..3744149 Flavobacterium johnsoniae UW101 5093145 YP_001195486.1 CDS Fjoh_3150 NC_009441.1 3744171 3746273 D Phage tail sheath protein FI-like protein 3744171..3746273 Flavobacterium johnsoniae UW101 5093146 YP_001195487.1 CDS Fjoh_3151 NC_009441.1 3746301 3746729 D TIGRFAM: conserved hypothetical phage tail protein; phage tail protein 3746301..3746729 Flavobacterium johnsoniae UW101 5093147 YP_001195488.1 CDS Fjoh_3152 NC_009441.1 3746732 3747178 D TIGRFAM: conserved hypothetical phage tail protein; phage tail protein 3746732..3747178 Flavobacterium johnsoniae UW101 5093148 YP_001195489.1 CDS Fjoh_3153 NC_009441.1 3747186 3747350 D hypothetical protein 3747186..3747350 Flavobacterium johnsoniae UW101 5093149 YP_001195490.1 CDS Fjoh_3154 NC_009441.1 3747352 3748041 D hypothetical protein 3747352..3748041 Flavobacterium johnsoniae UW101 5093150 YP_001195491.1 CDS Fjoh_3155 NC_009441.1 3748042 3749787 D TIGRFAM: Rhs element Vgr protein; Rhs element Vgr protein 3748042..3749787 Flavobacterium johnsoniae UW101 5093317 YP_001195492.1 CDS Fjoh_3156 NC_009441.1 3749993 3750283 D PFAM: PAAR repeat-containing protein; PAAR repeat-containing protein 3749993..3750283 Flavobacterium johnsoniae UW101 5093318 YP_001195493.1 CDS Fjoh_3157 NC_009441.1 3750286 3750696 D PFAM: GPW/gp25 family protein; GPW/gp25 family protein 3750286..3750696 Flavobacterium johnsoniae UW101 5093319 YP_001195494.1 CDS Fjoh_3158 NC_009441.1 3750709 3754083 D hypothetical protein 3750709..3754083 Flavobacterium johnsoniae UW101 5093320 YP_001195495.1 CDS Fjoh_3159 NC_009441.1 3754071 3756773 D hypothetical protein 3754071..3756773 Flavobacterium johnsoniae UW101 5093321 YP_001195496.1 CDS Fjoh_3160 NC_009441.1 3756785 3760210 D hypothetical protein 3756785..3760210 Flavobacterium johnsoniae UW101 5093322 YP_001195497.1 CDS Fjoh_3161 NC_009441.1 3760203 3761951 D hypothetical protein 3760203..3761951 Flavobacterium johnsoniae UW101 5093323 YP_001195498.1 CDS Fjoh_3162 NC_009441.1 3761963 3762541 D hypothetical protein 3761963..3762541 Flavobacterium johnsoniae UW101 5093324 YP_001195499.1 CDS Fjoh_3163 NC_009441.1 3762538 3763365 D hypothetical protein 3762538..3763365 Flavobacterium johnsoniae UW101 5093325 YP_001195500.1 CDS Fjoh_3164 NC_009441.1 3763386 3764246 D hypothetical protein 3763386..3764246 Flavobacterium johnsoniae UW101 5093326 YP_001195501.1 CDS Fjoh_3165 NC_009441.1 3764288 3765505 D hypothetical protein 3764288..3765505 Flavobacterium johnsoniae UW101 5093327 YP_001195502.1 CDS Fjoh_3166 NC_009441.1 3765543 3769544 D hypothetical protein 3765543..3769544 Flavobacterium johnsoniae UW101 5093328 YP_001195503.1 CDS Fjoh_3167 NC_009441.1 3769647 3770465 D PFAM: Peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 3769647..3770465 Flavobacterium johnsoniae UW101 5093329 YP_001195504.1 CDS Fjoh_3168 NC_009441.1 3770470 3771774 D PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; ATPase central domain-containing protein 3770470..3771774 Flavobacterium johnsoniae UW101 5093330 YP_001195505.1 CDS Fjoh_3169 NC_009441.1 3771887 3772999 R hypothetical protein complement(3771887..3772999) Flavobacterium johnsoniae UW101 5093331 YP_001195506.1 CDS Fjoh_3170 NC_009441.1 3773273 3773905 D PFAM: nitroreductase; nitroreductase 3773273..3773905 Flavobacterium johnsoniae UW101 5093332 YP_001195507.1 CDS Fjoh_3171 NC_009441.1 3773929 3775446 D PFAM: Pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 3773929..3775446 Flavobacterium johnsoniae UW101 5093333 YP_001195508.1 CDS Fjoh_3172 NC_009441.1 3775427 3777883 D PFAM: IucA/IucC family protein; IucA/IucC family protein 3775427..3777883 Flavobacterium johnsoniae UW101 5093334 YP_001195509.1 CDS Fjoh_3173 NC_009441.1 3777885 3779207 D L-lysine 6-monooxygenase 3777885..3779207 Flavobacterium johnsoniae UW101 5093335 YP_001195510.1 CDS Fjoh_3174 NC_009441.1 3779220 3781067 D PFAM: IucA/IucC family protein; IucA/IucC family protein 3779220..3781067 Flavobacterium johnsoniae UW101 5093336 YP_001195511.1 CDS Fjoh_3175 NC_009441.1 3781064 3782470 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 3781064..3782470 Flavobacterium johnsoniae UW101 5093337 YP_001195512.1 CDS Fjoh_3176 NC_009441.1 3782506 3782748 D hypothetical protein 3782506..3782748 Flavobacterium johnsoniae UW101 5093338 YP_001195513.1 CDS Fjoh_3177 NC_009441.1 3782766 3784181 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 3782766..3784181 Flavobacterium johnsoniae UW101 5093339 YP_001195514.1 CDS Fjoh_3178 NC_009441.1 3784235 3785326 D hypothetical protein 3784235..3785326 Flavobacterium johnsoniae UW101 5093340 YP_001195515.1 CDS Fjoh_3179 NC_009441.1 3785434 3787800 D PFAM: TonB-dependent receptor; Cna B domain protein; TonB-dependent receptor, plug; TonB-dependent receptor, plug 3785434..3787800 Flavobacterium johnsoniae UW101 5093341 YP_001195516.1 CDS Fjoh_3180 NC_009441.1 3787823 3789046 D hypothetical protein 3787823..3789046 Flavobacterium johnsoniae UW101 5093342 YP_001195517.1 CDS Fjoh_3181 NC_009441.1 3789165 3789689 R hypothetical protein complement(3789165..3789689) Flavobacterium johnsoniae UW101 5093343 YP_001195518.1 CDS Fjoh_3182 NC_009441.1 3789758 3790456 R hypothetical protein complement(3789758..3790456) Flavobacterium johnsoniae UW101 5093344 YP_001195519.1 CDS Fjoh_3183 NC_009441.1 3790667 3791221 D hypothetical protein 3790667..3791221 Flavobacterium johnsoniae UW101 5093345 YP_001195520.1 CDS Fjoh_3184 NC_009441.1 3791370 3792785 R hypothetical protein complement(3791370..3792785) Flavobacterium johnsoniae UW101 5093346 YP_001195521.1 CDS Fjoh_3185 NC_009441.1 3792973 3796245 R PFAM: AsmA family protein; AsmA family protein complement(3792973..3796245) Flavobacterium johnsoniae UW101 5093347 YP_001195522.1 CDS Fjoh_3186 NC_009441.1 3796634 3797422 D hypothetical protein 3796634..3797422 Flavobacterium johnsoniae UW101 5093348 YP_001195523.1 CDS Fjoh_3187 NC_009441.1 3797579 3798985 D PFAM: Alkaline phosphatase; alkaline phosphatase 3797579..3798985 Flavobacterium johnsoniae UW101 5093349 YP_001195524.1 CDS Fjoh_3188 NC_009441.1 3799168 3799623 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3799168..3799623 Flavobacterium johnsoniae UW101 5093350 YP_001195525.1 CDS Fjoh_3189 NC_009441.1 3799639 3801069 R PFAM: virulence factor family protein; virulence factor family protein complement(3799639..3801069) Flavobacterium johnsoniae UW101 5093351 YP_001195526.1 CDS Fjoh_3190 NC_009441.1 3801118 3803745 R PFAM: protein of unknown function DUF470; protein of unknown function DUF471; hypothetical protein complement(3801118..3803745) Flavobacterium johnsoniae UW101 5093352 YP_001195527.1 CDS Fjoh_3191 NC_009441.1 3804005 3805009 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3804005..3805009) Flavobacterium johnsoniae UW101 5093353 YP_001195528.1 CDS Fjoh_3192 NC_009441.1 3805056 3805913 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(3805056..3805913) Flavobacterium johnsoniae UW101 5093354 YP_001195529.1 CDS Fjoh_3193 NC_009441.1 3806077 3806655 R PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(3806077..3806655) Flavobacterium johnsoniae UW101 5093355 YP_001195530.1 CDS Fjoh_3194 NC_009441.1 3807047 3808336 D hypothetical protein 3807047..3808336 Flavobacterium johnsoniae UW101 5093356 YP_001195531.1 CDS Fjoh_3195 NC_009441.1 3808388 3809323 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; NAD-dependent epimerase/dehydratase complement(3808388..3809323) Flavobacterium johnsoniae UW101 5093357 YP_001195532.1 CDS Fjoh_3196 NC_009441.1 3809506 3810528 R PFAM: luciferase; luciferase complement(3809506..3810528) Flavobacterium johnsoniae UW101 5093358 YP_001195533.1 CDS Fjoh_3197 NC_009441.1 3810614 3811222 R hypothetical protein complement(3810614..3811222) Flavobacterium johnsoniae UW101 5093359 YP_001195534.1 CDS Fjoh_3198 NC_009441.1 3811636 3812148 D hypothetical protein 3811636..3812148 Flavobacterium johnsoniae UW101 5093360 YP_001195535.1 CDS Fjoh_3199 NC_009441.1 3812257 3812859 R hypothetical protein complement(3812257..3812859) Flavobacterium johnsoniae UW101 5093361 YP_001195536.1 CDS Fjoh_3200 NC_009441.1 3813131 3814903 R PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS complement(3813131..3814903) Flavobacterium johnsoniae UW101 5093362 YP_001195537.1 CDS Fjoh_3201 NC_009441.1 3815025 3815477 R PFAM: response regulator receiver; response regulator receiver protein complement(3815025..3815477) Flavobacterium johnsoniae UW101 5093363 YP_001195538.1 CDS Fjoh_3202 NC_009441.1 3815480 3818170 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3815480..3818170) Flavobacterium johnsoniae UW101 5093364 YP_001195539.1 CDS Fjoh_3203 NC_009441.1 3818600 3821545 R PFAM: Ig domain protein, group 2 domain protein; SMART: Parallel beta-helix repeat; Ig domain-containing protein complement(3818600..3821545) Flavobacterium johnsoniae UW101 5093365 YP_001195540.1 CDS Fjoh_3204 NC_009441.1 3821914 3822465 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3821914..3822465 Flavobacterium johnsoniae UW101 5093366 YP_001195541.1 CDS Fjoh_3205 NC_009441.1 3822535 3823755 D PFAM: protein of unknown function DUF763; hypothetical protein 3822535..3823755 Flavobacterium johnsoniae UW101 5093367 YP_001195542.1 CDS Fjoh_3206 NC_009441.1 3823836 3824288 R hypothetical protein complement(3823836..3824288) Flavobacterium johnsoniae UW101 5093368 YP_001195543.1 CDS Fjoh_3207 NC_009441.1 3824405 3825040 R hypothetical protein complement(3824405..3825040) Flavobacterium johnsoniae UW101 5093369 YP_001195544.1 CDS Fjoh_3208 NC_009441.1 3825227 3825421 R hypothetical protein complement(3825227..3825421) Flavobacterium johnsoniae UW101 5093370 YP_001195545.1 CDS Fjoh_3209 NC_009441.1 3825674 3827125 D PFAM: monooxygenase, FAD-binding; FAD-binding monooxygenase 3825674..3827125 Flavobacterium johnsoniae UW101 5093371 YP_001195546.1 CDS Fjoh_3210 NC_009441.1 3827216 3829234 R PFAM: peptidase M56, BlaR1; peptidase M56, BlaR1 complement(3827216..3829234) Flavobacterium johnsoniae UW101 5093372 YP_001195547.1 CDS Fjoh_3211 NC_009441.1 3829231 3829593 R PFAM: Penicillinase repressor; CopY family transcriptional regulator complement(3829231..3829593) Flavobacterium johnsoniae UW101 5093373 YP_001195548.1 CDS Fjoh_3212 NC_009441.1 3829917 3830498 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 3829917..3830498 Flavobacterium johnsoniae UW101 5093374 YP_001195549.1 CDS Fjoh_3213 NC_009441.1 3830550 3831341 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3830550..3831341 Flavobacterium johnsoniae UW101 5093375 YP_001195550.1 CDS Fjoh_3214 NC_009441.1 3831425 3832246 R hypothetical protein complement(3831425..3832246) Flavobacterium johnsoniae UW101 5093376 YP_001195551.1 CDS Fjoh_3215 NC_009441.1 3832371 3832838 R hypothetical protein complement(3832371..3832838) Flavobacterium johnsoniae UW101 5093377 YP_001195552.1 CDS Fjoh_3216 NC_009441.1 3832957 3833334 R hypothetical protein complement(3832957..3833334) Flavobacterium johnsoniae UW101 5093378 YP_001195553.1 CDS Fjoh_3217 NC_009441.1 3833605 3834174 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 3833605..3834174 Flavobacterium johnsoniae UW101 5093379 YP_001195554.1 CDS Fjoh_3218 NC_009441.1 3834221 3835909 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 3834221..3835909 Flavobacterium johnsoniae UW101 5093380 YP_001195555.1 CDS Fjoh_3219 NC_009441.1 3836168 3836641 D hypothetical protein 3836168..3836641 Flavobacterium johnsoniae UW101 5093381 YP_001195556.1 CDS Fjoh_3220 NC_009441.1 3836656 3838512 D PFAM: Rhs element Vgr protein; Rhs element Vgr protein 3836656..3838512 Flavobacterium johnsoniae UW101 5093382 YP_001195557.1 CDS Fjoh_3221 NC_009441.1 3838525 3840075 D hypothetical protein 3838525..3840075 Flavobacterium johnsoniae UW101 5093383 YP_001195558.1 CDS Fjoh_3222 NC_009441.1 3840130 3840690 D hypothetical protein 3840130..3840690 Flavobacterium johnsoniae UW101 5093384 YP_001195559.1 CDS Fjoh_3223 NC_009441.1 3840747 3841052 D hypothetical protein 3840747..3841052 Flavobacterium johnsoniae UW101 5093385 YP_001195560.1 CDS Fjoh_3224 NC_009441.1 3841210 3841650 D hypothetical protein 3841210..3841650 Flavobacterium johnsoniae UW101 5093386 YP_001195561.1 CDS Fjoh_3225 NC_009441.1 3841853 3842659 R hypothetical protein complement(3841853..3842659) Flavobacterium johnsoniae UW101 5093387 YP_001195562.1 CDS Fjoh_3226 NC_009441.1 3842749 3844158 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein complement(3842749..3844158) Flavobacterium johnsoniae UW101 5093388 YP_001195563.1 CDS Fjoh_3227 NC_009441.1 3844161 3847313 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(3844161..3847313) Flavobacterium johnsoniae UW101 5093389 YP_001195564.1 CDS Fjoh_3228 NC_009441.1 3847344 3848480 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3847344..3848480) Flavobacterium johnsoniae UW101 5093390 YP_001195565.1 CDS Fjoh_3229 NC_009441.1 3848839 3849591 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(3848839..3849591) Flavobacterium johnsoniae UW101 5093391 YP_001195566.1 CDS Fjoh_3230 NC_009441.1 3849597 3850691 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(3849597..3850691) Flavobacterium johnsoniae UW101 5093392 YP_001195567.1 CDS Fjoh_3231 NC_009441.1 3850891 3851937 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-ACP synthase complement(3850891..3851937) Flavobacterium johnsoniae UW101 5093393 YP_001195568.1 CDS Fjoh_3232 NC_009441.1 3852108 3852941 R PFAM: UspA domain protein; UspA domain-containing protein complement(3852108..3852941) Flavobacterium johnsoniae UW101 5093394 YP_001195569.1 CDS Fjoh_3233 NC_009441.1 3853573 3853824 R hypothetical protein complement(3853573..3853824) Flavobacterium johnsoniae UW101 5093395 YP_001195570.1 CDS Fjoh_3234 NC_009441.1 3854109 3854462 D hypothetical protein 3854109..3854462 Flavobacterium johnsoniae UW101 5093396 YP_001195571.1 CDS Fjoh_3235 NC_009441.1 3854600 3855301 R PFAM: Abortive infection protein; abortive infection protein complement(3854600..3855301) Flavobacterium johnsoniae UW101 5093397 YP_001195572.1 CDS Fjoh_3237 NC_009441.1 3856152 3856511 D hypothetical protein 3856152..3856511 Flavobacterium johnsoniae UW101 5092504 YP_001195573.1 CDS Fjoh_3238 NC_009441.1 3856755 3857861 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3856755..3857861 Flavobacterium johnsoniae UW101 5093399 YP_001195574.1 CDS Fjoh_3239 NC_009441.1 3857888 3861004 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3857888..3861004 Flavobacterium johnsoniae UW101 5093400 YP_001195575.1 CDS Fjoh_3240 NC_009441.1 3861008 3862462 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 3861008..3862462 Flavobacterium johnsoniae UW101 5093401 YP_001195576.1 CDS Fjoh_3241 NC_009441.1 3862565 3863170 R nucleoside phosphorylase-like protein complement(3862565..3863170) Flavobacterium johnsoniae UW101 5093402 YP_001195577.1 CDS Fjoh_3242 NC_009441.1 3863394 3864224 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 3863394..3864224 Flavobacterium johnsoniae UW101 5093403 YP_001195578.1 CDS Fjoh_3243 NC_009441.1 3864330 3865220 D PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; extradiol ring-cleavage dioxygenase III subunit B 3864330..3865220 Flavobacterium johnsoniae UW101 5093404 YP_001195579.1 CDS Fjoh_3244 NC_009441.1 3865217 3865954 D PFAM: phospholipase/Carboxylesterase; phospholipase/carboxylesterase 3865217..3865954 Flavobacterium johnsoniae UW101 5093405 YP_001195580.1 CDS Fjoh_3245 NC_009441.1 3866056 3867180 R PFAM: Patatin; patatin complement(3866056..3867180) Flavobacterium johnsoniae UW101 5093406 YP_001195581.1 CDS Fjoh_3246 NC_009441.1 3867362 3875644 R hypothetical protein complement(3867362..3875644) Flavobacterium johnsoniae UW101 5093407 YP_001195582.1 CDS Fjoh_3247 NC_009441.1 3875655 3882629 R SMART: leucine-rich repeat-containing protein, typical subtype; leucine-rich repeat-containing protein complement(3875655..3882629) Flavobacterium johnsoniae UW101 5093408 YP_001195583.1 CDS Fjoh_3248 NC_009441.1 3882936 3883487 D hypothetical protein 3882936..3883487 Flavobacterium johnsoniae UW101 5093409 YP_001195584.1 CDS Fjoh_3249 NC_009441.1 3883517 3885340 R PFAM: Alkaline phosphatase; alkaline phosphatase complement(3883517..3885340) Flavobacterium johnsoniae UW101 5093410 YP_001195585.1 CDS Fjoh_3250 NC_009441.1 3885532 3887067 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(3885532..3887067) Flavobacterium johnsoniae UW101 5093411 YP_001195586.1 CDS Fjoh_3251 NC_009441.1 3887087 3890473 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(3887087..3890473) Flavobacterium johnsoniae UW101 5093412 YP_001195587.1 CDS Fjoh_3252 NC_009441.1 3890555 3891481 R PFAM: FecR protein; anti-FecI sigma factor FecR complement(3890555..3891481) Flavobacterium johnsoniae UW101 5093413 YP_001195588.1 CDS Fjoh_3253 NC_009441.1 3891596 3892153 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(3891596..3892153) Flavobacterium johnsoniae UW101 5093414 YP_001195589.1 CDS Fjoh_3254 NC_009441.1 3892562 3894397 R hypothetical protein complement(3892562..3894397) Flavobacterium johnsoniae UW101 5093415 YP_001195590.1 CDS Fjoh_3255 NC_009441.1 3894891 3895379 R hypothetical protein complement(3894891..3895379) Flavobacterium johnsoniae UW101 5093416 YP_001195591.1 CDS Fjoh_3256 NC_009441.1 3895387 3895947 R hypothetical protein complement(3895387..3895947) Flavobacterium johnsoniae UW101 5093417 YP_001195592.1 CDS Fjoh_3257 NC_009441.1 3895944 3897596 R hypothetical protein complement(3895944..3897596) Flavobacterium johnsoniae UW101 5093418 YP_001195593.1 CDS Fjoh_3258 NC_009441.1 3897690 3898187 R hypothetical protein complement(3897690..3898187) Flavobacterium johnsoniae UW101 5093419 YP_001195594.1 CDS Fjoh_3259 NC_009441.1 3898194 3899840 R hypothetical protein complement(3898194..3899840) Flavobacterium johnsoniae UW101 5093420 YP_001195595.1 CDS Fjoh_3260 NC_009441.1 3899844 3901652 R PFAM: Rhs element Vgr protein; Rhs element Vgr protein complement(3899844..3901652) Flavobacterium johnsoniae UW101 5093421 YP_001195596.1 CDS Fjoh_3261 NC_009441.1 3901691 3902086 R hypothetical protein complement(3901691..3902086) Flavobacterium johnsoniae UW101 5093422 YP_001195597.1 CDS Fjoh_3262 NC_009441.1 3902237 3902623 R hypothetical protein complement(3902237..3902623) Flavobacterium johnsoniae UW101 5093423 YP_001195598.1 CDS Fjoh_3263 NC_009441.1 3902805 3903236 R PFAM: GPW/gp25 family protein; GPW/gp25 family protein complement(3902805..3903236) Flavobacterium johnsoniae UW101 5093424 YP_001195599.1 CDS Fjoh_3264 NC_009441.1 3903250 3903963 R hypothetical protein complement(3903250..3903963) Flavobacterium johnsoniae UW101 5093425 YP_001195600.1 CDS Fjoh_3265 NC_009441.1 3904022 3904549 R hypothetical protein complement(3904022..3904549) Flavobacterium johnsoniae UW101 5093426 YP_001195601.1 CDS Fjoh_3266 NC_009441.1 3904650 3906020 R hypothetical protein complement(3904650..3906020) Flavobacterium johnsoniae UW101 5093427 YP_001195602.1 CDS Fjoh_3267 NC_009441.1 3906041 3906490 R hypothetical protein complement(3906041..3906490) Flavobacterium johnsoniae UW101 5092985 YP_001195603.1 CDS Fjoh_3268 NC_009441.1 3906545 3907057 R hypothetical protein complement(3906545..3907057) Flavobacterium johnsoniae UW101 5092986 YP_001195604.1 CDS Fjoh_3269 NC_009441.1 3907083 3908252 R hypothetical protein complement(3907083..3908252) Flavobacterium johnsoniae UW101 5092987 YP_001195605.1 CDS Fjoh_3270 NC_009441.1 3908526 3909506 R hypothetical protein complement(3908526..3909506) Flavobacterium johnsoniae UW101 5092988 YP_001195606.1 CDS Fjoh_3271 NC_009441.1 3909608 3910762 R PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; SH3 type 3 domain-containing protein complement(3909608..3910762) Flavobacterium johnsoniae UW101 5092989 YP_001195607.1 CDS Fjoh_3272 NC_009441.1 3910884 3911552 R hypothetical protein complement(3910884..3911552) Flavobacterium johnsoniae UW101 5092990 YP_001195608.1 CDS Fjoh_3273 NC_009441.1 3911564 3912304 R hypothetical protein complement(3911564..3912304) Flavobacterium johnsoniae UW101 5092991 YP_001195609.1 CDS Fjoh_3274 NC_009441.1 3912310 3915042 R hypothetical protein complement(3912310..3915042) Flavobacterium johnsoniae UW101 5092992 YP_001195610.1 CDS Fjoh_3275 NC_009441.1 3915054 3915548 R hypothetical protein complement(3915054..3915548) Flavobacterium johnsoniae UW101 5092993 YP_001195611.1 CDS Fjoh_3276 NC_009441.1 3915601 3916674 R hypothetical protein complement(3915601..3916674) Flavobacterium johnsoniae UW101 5092994 YP_001195612.1 CDS Fjoh_3277 NC_009441.1 3916691 3917662 R hypothetical protein complement(3916691..3917662) Flavobacterium johnsoniae UW101 5092995 YP_001195613.1 CDS Fjoh_3278 NC_009441.1 3917665 3918609 R hypothetical protein complement(3917665..3918609) Flavobacterium johnsoniae UW101 5092996 YP_001195614.1 CDS Fjoh_3279 NC_009441.1 3918593 3919216 R PFAM: NLP/P60 protein; NLP/P60 protein complement(3918593..3919216) Flavobacterium johnsoniae UW101 5092997 YP_001195615.1 CDS Fjoh_3280 NC_009441.1 3919581 3920633 D PFAM: PKD domain containing protein; PKD domain-containing protein 3919581..3920633 Flavobacterium johnsoniae UW101 5092998 YP_001195616.1 CDS Fjoh_3281 NC_009441.1 3920641 3923100 D PFAM: ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 3920641..3923100 Flavobacterium johnsoniae UW101 5092999 YP_001195617.1 CDS Fjoh_3282 NC_009441.1 3923199 3923477 R hypothetical protein complement(3923199..3923477) Flavobacterium johnsoniae UW101 5093000 YP_001195618.1 CDS Fjoh_3283 NC_009441.1 3923481 3925880 R PFAM: sulfatase; sulfatase complement(3923481..3925880) Flavobacterium johnsoniae UW101 5093001 YP_001195619.1 CDS Fjoh_3284 NC_009441.1 3925903 3927384 R PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; hypothetical protein complement(3925903..3927384) Flavobacterium johnsoniae UW101 5093002 YP_001195620.1 CDS Fjoh_3285 NC_009441.1 3927649 3928239 D hypothetical protein 3927649..3928239 Flavobacterium johnsoniae UW101 5093003 YP_001195621.1 CDS Fjoh_3286 NC_009441.1 3928406 3928750 D hypothetical protein 3928406..3928750 Flavobacterium johnsoniae UW101 5093004 YP_001195622.1 CDS Fjoh_3287 NC_009441.1 3929139 3929642 D hypothetical protein 3929139..3929642 Flavobacterium johnsoniae UW101 5093005 YP_001195623.1 CDS Fjoh_3288 NC_009441.1 3929652 3931844 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 3929652..3931844 Flavobacterium johnsoniae UW101 5093006 YP_001195624.1 CDS Fjoh_3289 NC_009441.1 3931874 3932773 D hypothetical protein 3931874..3932773 Flavobacterium johnsoniae UW101 5093007 YP_001195625.1 CDS Fjoh_3290 NC_009441.1 3932810 3934024 D hypothetical protein 3932810..3934024 Flavobacterium johnsoniae UW101 5093008 YP_001195626.1 CDS Fjoh_3291 NC_009441.1 3934167 3934754 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 3934167..3934754 Flavobacterium johnsoniae UW101 5093009 YP_001195627.1 CDS Fjoh_3292 NC_009441.1 3934887 3935693 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 3934887..3935693 Flavobacterium johnsoniae UW101 5093010 YP_001195628.1 CDS Fjoh_3293 NC_009441.1 3935796 3936854 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(3935796..3936854) Flavobacterium johnsoniae UW101 5093011 YP_001195629.1 CDS Fjoh_3294 NC_009441.1 3937130 3937693 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 3937130..3937693 Flavobacterium johnsoniae UW101 5093012 YP_001195630.1 CDS Fjoh_3295 NC_009441.1 3937766 3938092 D PFAM: small multidrug resistance protein; small multidrug resistance protein 3937766..3938092 Flavobacterium johnsoniae UW101 5093013 YP_001195631.1 CDS Fjoh_3296 NC_009441.1 3938557 3940356 D hypothetical protein 3938557..3940356 Flavobacterium johnsoniae UW101 5093014 YP_001195632.1 CDS Fjoh_3297 NC_009441.1 3940410 3941900 D hypothetical protein 3940410..3941900 Flavobacterium johnsoniae UW101 5093015 YP_001195633.1 CDS Fjoh_3298 NC_009441.1 3942063 3942509 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3942063..3942509 Flavobacterium johnsoniae UW101 5093016 YP_001195634.1 CDS Fjoh_3299 NC_009441.1 3942518 3943381 R PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(3942518..3943381) Flavobacterium johnsoniae UW101 5093017 YP_001195635.1 CDS Fjoh_3300 NC_009441.1 3943444 3943971 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3943444..3943971 Flavobacterium johnsoniae UW101 5093018 YP_001195636.1 CDS Fjoh_3301 NC_009441.1 3943964 3944854 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 3943964..3944854 Flavobacterium johnsoniae UW101 5093019 YP_001195637.1 CDS Fjoh_3302 NC_009441.1 3944969 3945451 D hypothetical protein 3944969..3945451 Flavobacterium johnsoniae UW101 5093020 YP_001195638.1 CDS Fjoh_3303 NC_009441.1 3945432 3947999 D PFAM: mRNA capping enzyme; DNA primase, small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; ATP dependent DNA ligase 3945432..3947999 Flavobacterium johnsoniae UW101 5093021 YP_001195639.1 CDS Fjoh_3304 NC_009441.1 3948009 3948788 R PFAM: Ku domain protein; Ku domain-containing protein complement(3948009..3948788) Flavobacterium johnsoniae UW101 5093022 YP_001195640.1 CDS Fjoh_3305 NC_009441.1 3948904 3949398 R hypothetical protein complement(3948904..3949398) Flavobacterium johnsoniae UW101 5093023 YP_001195641.1 CDS Fjoh_3306 NC_009441.1 3949698 3950543 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(3949698..3950543) Flavobacterium johnsoniae UW101 5093024 YP_001195642.1 CDS Fjoh_3307 NC_009441.1 3950703 3951929 R PFAM: glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase complement(3950703..3951929) Flavobacterium johnsoniae UW101 5093025 YP_001195643.1 CDS Fjoh_3308 NC_009441.1 3952100 3952486 R PFAM: DoxX family protein; DoxX family protein complement(3952100..3952486) Flavobacterium johnsoniae UW101 5093026 YP_001195644.1 CDS Fjoh_3309 NC_009441.1 3952636 3953649 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(3952636..3953649) Flavobacterium johnsoniae UW101 5093027 YP_001195645.1 CDS Fjoh_3310 NC_009441.1 3953950 3954510 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3953950..3954510 Flavobacterium johnsoniae UW101 5093028 YP_001195646.1 CDS Fjoh_3311 NC_009441.1 3954657 3955091 D PFAM: DoxX family protein; DoxX family protein 3954657..3955091 Flavobacterium johnsoniae UW101 5093029 YP_001195647.1 CDS Fjoh_3312 NC_009441.1 3955158 3955550 R hypothetical protein complement(3955158..3955550) Flavobacterium johnsoniae UW101 5093030 YP_001195648.1 CDS Fjoh_3313 NC_009441.1 3955632 3957548 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(3955632..3957548) Flavobacterium johnsoniae UW101 5093031 YP_001195649.1 CDS Fjoh_3314 NC_009441.1 3957719 3958984 R hypothetical protein complement(3957719..3958984) Flavobacterium johnsoniae UW101 5093032 YP_001195650.1 CDS Fjoh_3315 NC_009441.1 3959010 3961355 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(3959010..3961355) Flavobacterium johnsoniae UW101 5093033 YP_001195651.1 CDS Fjoh_3316 NC_009441.1 3961492 3962484 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 3961492..3962484 Flavobacterium johnsoniae UW101 5093034 YP_001195652.1 CDS Fjoh_3317 NC_009441.1 3962789 3963625 D PFAM: protein of unknown function DUF81; hypothetical protein 3962789..3963625 Flavobacterium johnsoniae UW101 5093035 YP_001195653.1 CDS Fjoh_3318 NC_009441.1 3963612 3964019 D PFAM: protein of unknown function DUF1634; hypothetical protein 3963612..3964019 Flavobacterium johnsoniae UW101 5093036 YP_001195654.1 CDS Fjoh_3319 NC_009441.1 3964089 3965111 D PFAM: luciferase; luciferase 3964089..3965111 Flavobacterium johnsoniae UW101 5093037 YP_001195655.1 CDS Fjoh_3320 NC_009441.1 3965347 3967770 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor complement(3965347..3967770) Flavobacterium johnsoniae UW101 5093038 YP_001195656.1 CDS Fjoh_3321 NC_009441.1 3967971 3969251 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3967971..3969251 Flavobacterium johnsoniae UW101 5093039 YP_001195657.1 CDS Fjoh_3322 NC_009441.1 3969343 3969954 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone) complement(3969343..3969954) Flavobacterium johnsoniae UW101 5093040 YP_001195658.1 CDS Fjoh_3323 NC_009441.1 3970062 3970433 D PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 3970062..3970433 Flavobacterium johnsoniae UW101 5092930 YP_001195659.1 CDS Fjoh_3324 NC_009441.1 3970612 3973530 D PFAM: PKD domain containing protein; Carbohydrate binding family 6; Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; cellulose binding, type IV; carbohydrate-binding family 6 protein 3970612..3973530 Flavobacterium johnsoniae UW101 5092931 YP_001195660.1 CDS sdhA NC_009441.1 3973623 3975533 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3973623..3975533 Flavobacterium johnsoniae UW101 5092932 YP_001195661.1 CDS Fjoh_3326 NC_009441.1 3975635 3976381 D PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; succinate dehydrogenase/fumarate reductase iron-sulfur subunit 3975635..3976381 Flavobacterium johnsoniae UW101 5092933 YP_001195662.1 CDS Fjoh_3327 NC_009441.1 3976533 3977282 R PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(3976533..3977282) Flavobacterium johnsoniae UW101 5092934 YP_001195663.1 CDS Fjoh_3328 NC_009441.1 3977667 3978101 D hypothetical protein 3977667..3978101 Flavobacterium johnsoniae UW101 5092935 YP_001195664.1 CDS Fjoh_3329 NC_009441.1 3978253 3978606 D hypothetical protein 3978253..3978606 Flavobacterium johnsoniae UW101 5092936 YP_001195665.1 CDS Fjoh_3330 NC_009441.1 3978842 3979537 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3978842..3979537 Flavobacterium johnsoniae UW101 5092937 YP_001195666.1 CDS Fjoh_3331 NC_009441.1 3979539 3981839 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor 3979539..3981839 Flavobacterium johnsoniae UW101 5092938 YP_001195667.1 CDS Fjoh_3332 NC_009441.1 3982032 3983483 D multi-copper enzyme maturation ABC transporter permease component-like protein 3982032..3983483 Flavobacterium johnsoniae UW101 5092939 YP_001195668.1 CDS Fjoh_3333 NC_009441.1 3983485 3984834 D hypothetical protein 3983485..3984834 Flavobacterium johnsoniae UW101 5092940 YP_001195669.1 CDS Fjoh_3334 NC_009441.1 3985000 3985638 D hypothetical protein 3985000..3985638 Flavobacterium johnsoniae UW101 5092941 YP_001195670.1 CDS Fjoh_3335 NC_009441.1 3985951 3986550 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 3985951..3986550 Flavobacterium johnsoniae UW101 5092942 YP_001195671.1 CDS Fjoh_3336 NC_009441.1 3986618 3987721 D PFAM: FecR protein; FecR anti-FecI sigma factor 3986618..3987721 Flavobacterium johnsoniae UW101 5092943 YP_001195672.1 CDS Fjoh_3337 NC_009441.1 3987732 3991091 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 3987732..3991091 Flavobacterium johnsoniae UW101 5092944 YP_001195673.1 CDS Fjoh_3338 NC_009441.1 3991078 3992556 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3991078..3992556 Flavobacterium johnsoniae UW101 5092945 YP_001195674.1 CDS Fjoh_3339 NC_009441.1 3992543 3994021 D hypothetical protein 3992543..3994021 Flavobacterium johnsoniae UW101 5092946 YP_001195675.1 CDS Fjoh_3340 NC_009441.1 3994229 3995338 D PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 3994229..3995338 Flavobacterium johnsoniae UW101 5092947 YP_001195676.1 CDS Fjoh_3341 NC_009441.1 3996000 3996650 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3996000..3996650 Flavobacterium johnsoniae UW101 5092948 YP_001195677.1 CDS Fjoh_3342 NC_009441.1 3996663 3997739 R Outer membrane protein/protective antigen OMA87-like protein complement(3996663..3997739) Flavobacterium johnsoniae UW101 5092949 YP_001195678.1 CDS Fjoh_3343 NC_009441.1 3997865 3998581 R hypothetical protein complement(3997865..3998581) Flavobacterium johnsoniae UW101 5092950 YP_001195679.1 CDS Fjoh_3344 NC_009441.1 3998681 4000672 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase complement(3998681..4000672) Flavobacterium johnsoniae UW101 5092951 YP_001195680.1 CDS Fjoh_3345 NC_009441.1 4000913 4002178 R TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(4000913..4002178) Flavobacterium johnsoniae UW101 5092952 YP_001195681.1 CDS Fjoh_3348 NC_009441.1 4006731 4007054 R hypothetical protein complement(4006731..4007054) Flavobacterium johnsoniae UW101 5092954 YP_001195682.1 CDS Fjoh_3349 NC_009441.1 4007314 4008435 D hypothetical protein 4007314..4008435 Flavobacterium johnsoniae UW101 5092955 YP_001195683.1 CDS Fjoh_3350 NC_009441.1 4008445 4009218 D hypothetical protein 4008445..4009218 Flavobacterium johnsoniae UW101 5092956 YP_001195684.1 CDS Fjoh_3351 NC_009441.1 4009221 4009805 R PFAM: CheB methylesterase; CheB methylesterase complement(4009221..4009805) Flavobacterium johnsoniae UW101 5092957 YP_001195685.1 CDS Fjoh_3352 NC_009441.1 4009787 4010596 R PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase complement(4009787..4010596) Flavobacterium johnsoniae UW101 5092958 YP_001195686.1 CDS Fjoh_3353 NC_009441.1 4010603 4010968 R PFAM: response regulator receiver; response regulator receiver protein complement(4010603..4010968) Flavobacterium johnsoniae UW101 5092959 YP_001195687.1 CDS Fjoh_3354 NC_009441.1 4011105 4014674 R PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; SMART: histidine kinase, HAMP region domain protein; multi-sensor hybrid histidine kinase complement(4011105..4014674) Flavobacterium johnsoniae UW101 5092960 YP_001195688.1 CDS Fjoh_3355 NC_009441.1 4014690 4015907 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; response regulator receiver sensor signal transduction histidine kinase complement(4014690..4015907) Flavobacterium johnsoniae UW101 5092961 YP_001195689.1 CDS Fjoh_3356 NC_009441.1 4016273 4017121 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 4016273..4017121 Flavobacterium johnsoniae UW101 5092962 YP_001195690.1 CDS Fjoh_3357 NC_009441.1 4017255 4017515 D PFAM: MtN3 and saliva related transmembrane protein; MtN3 and saliva related transmembrane protein 4017255..4017515 Flavobacterium johnsoniae UW101 5092963 YP_001195691.1 CDS Fjoh_3358 NC_009441.1 4017845 4018639 R hypothetical protein complement(4017845..4018639) Flavobacterium johnsoniae UW101 5092964 YP_001195692.1 CDS Fjoh_3359 NC_009441.1 4018955 4019293 R hypothetical protein complement(4018955..4019293) Flavobacterium johnsoniae UW101 5092965 YP_001195693.1 CDS Fjoh_3360 NC_009441.1 4019518 4022724 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 4019518..4022724 Flavobacterium johnsoniae UW101 5092966 YP_001195694.1 CDS Fjoh_3361 NC_009441.1 4022784 4023290 R PFAM: response regulator receiver; response regulator receiver protein complement(4022784..4023290) Flavobacterium johnsoniae UW101 5092967 YP_001195695.1 CDS Fjoh_3362 NC_009441.1 4023424 4023924 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like protein 4023424..4023924 Flavobacterium johnsoniae UW101 5092968 YP_001195696.1 CDS Fjoh_3363 NC_009441.1 4024058 4024768 R PFAM: protein of unknown function DUF72; hypothetical protein complement(4024058..4024768) Flavobacterium johnsoniae UW101 5092969 YP_001195697.1 CDS Fjoh_3364 NC_009441.1 4024765 4025496 R PFAM: Formamidopyrimidine-DNA glycolase; formamidopyrimidine-DNA glycosylase complement(4024765..4025496) Flavobacterium johnsoniae UW101 5092970 YP_001195698.1 CDS Fjoh_3365 NC_009441.1 4025572 4026168 R PFAM: protein of unknown function DUF892; hypothetical protein complement(4025572..4026168) Flavobacterium johnsoniae UW101 5092971 YP_001195699.1 CDS Fjoh_3366 NC_009441.1 4026355 4026912 D hypothetical protein 4026355..4026912 Flavobacterium johnsoniae UW101 5092972 YP_001195700.1 CDS Fjoh_3367 NC_009441.1 4026985 4027632 R hypothetical protein complement(4026985..4027632) Flavobacterium johnsoniae UW101 5092973 YP_001195701.1 CDS Fjoh_3368 NC_009441.1 4027967 4029049 R topoisomerase IB-like protein complement(4027967..4029049) Flavobacterium johnsoniae UW101 5092974 YP_001195702.1 CDS Fjoh_3369 NC_009441.1 4029183 4029422 R hypothetical protein complement(4029183..4029422) Flavobacterium johnsoniae UW101 5092975 YP_001195703.1 CDS Fjoh_3370 NC_009441.1 4029761 4030156 R hypothetical protein complement(4029761..4030156) Flavobacterium johnsoniae UW101 5092976 YP_001195704.1 CDS Fjoh_3371 NC_009441.1 4030385 4030972 D hypothetical protein 4030385..4030972 Flavobacterium johnsoniae UW101 5092977 YP_001195705.1 CDS Fjoh_3372 NC_009441.1 4031218 4031625 R hypothetical protein complement(4031218..4031625) Flavobacterium johnsoniae UW101 5092978 YP_001195706.1 CDS Fjoh_3373 NC_009441.1 4031655 4032071 R PFAM: Cupin 2, conserved barrel domain protein; cupin complement(4031655..4032071) Flavobacterium johnsoniae UW101 5092979 YP_001195707.1 CDS Fjoh_3374 NC_009441.1 4032264 4033133 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(4032264..4033133) Flavobacterium johnsoniae UW101 5092980 YP_001195708.1 CDS Fjoh_3375 NC_009441.1 4033365 4033955 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 4033365..4033955 Flavobacterium johnsoniae UW101 5092981 YP_001195709.1 CDS Fjoh_3376 NC_009441.1 4034091 4034468 D PFAM: thioesterase superfamily protein; thioesterase superfamily protein 4034091..4034468 Flavobacterium johnsoniae UW101 5092982 YP_001195710.1 CDS Fjoh_3377 NC_009441.1 4034534 4036084 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 4034534..4036084 Flavobacterium johnsoniae UW101 5092983 YP_001195711.2 CDS Fjoh_3378 NC_009441.1 4036124 4038943 R PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase complement(4036124..4038943) Flavobacterium johnsoniae UW101 5092984 YP_001195712.1 CDS Fjoh_3379 NC_009441.1 4039153 4039539 D hypothetical protein 4039153..4039539 Flavobacterium johnsoniae UW101 5093627 YP_001195713.1 CDS Fjoh_3380 NC_009441.1 4039559 4040425 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 4039559..4040425 Flavobacterium johnsoniae UW101 5093628 YP_001195714.1 CDS Fjoh_3381 NC_009441.1 4040484 4040984 D hypothetical protein 4040484..4040984 Flavobacterium johnsoniae UW101 5093629 YP_001195715.1 CDS Fjoh_3382 NC_009441.1 4041149 4041553 R hypothetical protein complement(4041149..4041553) Flavobacterium johnsoniae UW101 5093630 YP_001195716.1 CDS Fjoh_3383 NC_009441.1 4041631 4042125 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(4041631..4042125) Flavobacterium johnsoniae UW101 5093631 YP_001195717.1 CDS Fjoh_3384 NC_009441.1 4042298 4042600 D SMART: regulatory protein, ArsR; regulatory protein ArsR 4042298..4042600 Flavobacterium johnsoniae UW101 5093632 YP_001195718.1 CDS Fjoh_3385 NC_009441.1 4042607 4043713 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 4042607..4043713 Flavobacterium johnsoniae UW101 5093633 YP_001195719.1 CDS Fjoh_3386 NC_009441.1 4044092 4045294 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 4044092..4045294 Flavobacterium johnsoniae UW101 5093634 YP_001195720.1 CDS Fjoh_3387 NC_009441.1 4045489 4046619 R PFAM: acyltransferase 3; acyltransferase complement(4045489..4046619) Flavobacterium johnsoniae UW101 5093635 YP_001195721.1 CDS Fjoh_3388 NC_009441.1 4046676 4046822 R hypothetical protein complement(4046676..4046822) Flavobacterium johnsoniae UW101 5093636 YP_001195722.1 CDS Fjoh_3389 NC_009441.1 4047011 4049227 R PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 protein complement(4047011..4049227) Flavobacterium johnsoniae UW101 5093637 YP_001195723.1 CDS Fjoh_3390 NC_009441.1 4049436 4051106 R hypothetical protein complement(4049436..4051106) Flavobacterium johnsoniae UW101 5093638 YP_001195724.1 CDS Fjoh_3391 NC_009441.1 4051213 4051557 D hypothetical protein 4051213..4051557 Flavobacterium johnsoniae UW101 5093639 YP_001195725.1 CDS Fjoh_3392 NC_009441.1 4051709 4054153 R PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 protein complement(4051709..4054153) Flavobacterium johnsoniae UW101 5093640 YP_001195726.1 CDS Fjoh_3393 NC_009441.1 4054463 4055209 D PFAM: NUDIX hydrolase; NUDIX hydrolase 4054463..4055209 Flavobacterium johnsoniae UW101 5093641 YP_001195727.1 CDS Fjoh_3394 NC_009441.1 4055276 4057534 R PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; acyl-CoA oxidase complement(4055276..4057534) Flavobacterium johnsoniae UW101 5093642 YP_001195728.1 CDS Fjoh_3395 NC_009441.1 4057863 4058780 R PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein complement(4057863..4058780) Flavobacterium johnsoniae UW101 5093643 YP_001195729.1 CDS Fjoh_3396 NC_009441.1 4058877 4060298 D PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator 4058877..4060298 Flavobacterium johnsoniae UW101 5093644 YP_001195730.1 CDS Fjoh_3397 NC_009441.1 4060382 4061329 R PFAM: protein of unknown function UPF0187; hypothetical protein complement(4060382..4061329) Flavobacterium johnsoniae UW101 5093645 YP_001195731.1 CDS Fjoh_3398 NC_009441.1 4061566 4062288 R hypothetical protein complement(4061566..4062288) Flavobacterium johnsoniae UW101 5093646 YP_001195732.1 CDS Fjoh_3399 NC_009441.1 4062366 4063769 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(4062366..4063769) Flavobacterium johnsoniae UW101 5093647 YP_001195733.1 CDS Fjoh_3400 NC_009441.1 4063771 4064445 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(4063771..4064445) Flavobacterium johnsoniae UW101 5093648 YP_001195734.1 CDS Fjoh_3401 NC_009441.1 4064614 4065234 R hypothetical protein complement(4064614..4065234) Flavobacterium johnsoniae UW101 5093649 YP_001195735.1 CDS Fjoh_3402 NC_009441.1 4065347 4066681 R PFAM: surface antigen (D15); surface antigen (D15) complement(4065347..4066681) Flavobacterium johnsoniae UW101 5093650 YP_001195736.1 CDS Fjoh_3403 NC_009441.1 4066772 4068181 R TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; aspartate ammonia-lyase complement(4066772..4068181) Flavobacterium johnsoniae UW101 5093651 YP_001195737.1 CDS Fjoh_3404 NC_009441.1 4068339 4068917 D PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein 4068339..4068917 Flavobacterium johnsoniae UW101 5093652 YP_001195738.1 CDS Fjoh_3405 NC_009441.1 4068930 4070345 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(4068930..4070345) Flavobacterium johnsoniae UW101 5093653 YP_001195739.1 CDS Fjoh_3406 NC_009441.1 4070385 4070951 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(4070385..4070951) Flavobacterium johnsoniae UW101 5093654 YP_001195740.1 CDS Fjoh_3407 NC_009441.1 4071066 4071563 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4071066..4071563) Flavobacterium johnsoniae UW101 5093655 YP_001195741.1 CDS Fjoh_3408 NC_009441.1 4071565 4072605 R catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase complement(4071565..4072605) Flavobacterium johnsoniae UW101 5093656 YP_001195742.1 CDS Fjoh_3409 NC_009441.1 4072829 4073422 R PFAM: tRNA--hydroxylase; tRNA--hydroxylase complement(4072829..4073422) Flavobacterium johnsoniae UW101 5093657 YP_001195743.1 CDS glyA NC_009441.1 4073571 4074845 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(4073571..4074845) Flavobacterium johnsoniae UW101 5093658 YP_001195744.1 CDS Fjoh_3411 NC_009441.1 4074955 4076238 D TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetase 4074955..4076238 Flavobacterium johnsoniae UW101 5093659 YP_001195745.1 CDS Fjoh_3412 NC_009441.1 4076342 4077526 R hypothetical protein complement(4076342..4077526) Flavobacterium johnsoniae UW101 5093660 YP_001195746.1 CDS Fjoh_3413 NC_009441.1 4077741 4078781 R PFAM: Porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase complement(4077741..4078781) Flavobacterium johnsoniae UW101 5093661 YP_001195747.1 CDS Fjoh_3414 NC_009441.1 4078967 4080487 D hypothetical protein 4078967..4080487 Flavobacterium johnsoniae UW101 5093662 YP_001195748.1 CDS Fjoh_3415 NC_009441.1 4080687 4081949 D PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4080687..4081949 Flavobacterium johnsoniae UW101 5093663 YP_001195749.1 CDS Fjoh_3416 NC_009441.1 4082323 4083213 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(4082323..4083213) Flavobacterium johnsoniae UW101 5093664 YP_001195750.1 CDS Fjoh_3417 NC_009441.1 4083375 4083791 R hypothetical protein complement(4083375..4083791) Flavobacterium johnsoniae UW101 5093665 YP_001195751.1 CDS Fjoh_3418 NC_009441.1 4083961 4084371 R hypothetical protein complement(4083961..4084371) Flavobacterium johnsoniae UW101 5093666 YP_001195752.1 CDS Fjoh_3419 NC_009441.1 4084716 4085600 R PFAM: protein of unknown function DUF808; hypothetical protein complement(4084716..4085600) Flavobacterium johnsoniae UW101 5093667 YP_001195753.1 CDS Fjoh_3420 NC_009441.1 4085957 4086994 R hypothetical protein complement(4085957..4086994) Flavobacterium johnsoniae UW101 5093668 YP_001195754.1 CDS Fjoh_3421 NC_009441.1 4087018 4087509 R hypothetical protein complement(4087018..4087509) Flavobacterium johnsoniae UW101 5093669 YP_001195755.1 CDS Fjoh_3422 NC_009441.1 4087674 4090277 R PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase complement(4087674..4090277) Flavobacterium johnsoniae UW101 5093670 YP_001195756.1 CDS Fjoh_3423 NC_009441.1 4090483 4090872 D hypothetical protein 4090483..4090872 Flavobacterium johnsoniae UW101 5093671 YP_001195757.1 CDS Fjoh_3424 NC_009441.1 4090892 4091434 D guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein 4090892..4091434 Flavobacterium johnsoniae UW101 5093672 YP_001195758.1 CDS Fjoh_3425 NC_009441.1 4091540 4092709 R hypothetical protein complement(4091540..4092709) Flavobacterium johnsoniae UW101 5093673 YP_001195759.1 CDS Fjoh_3426 NC_009441.1 4092706 4093707 R hypothetical protein complement(4092706..4093707) Flavobacterium johnsoniae UW101 5093674 YP_001195760.1 CDS Fjoh_3427 NC_009441.1 4093846 4095126 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(4093846..4095126) Flavobacterium johnsoniae UW101 5093675 YP_001195761.1 CDS Fjoh_3428 NC_009441.1 4095178 4096248 R PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M20 complement(4095178..4096248) Flavobacterium johnsoniae UW101 5093676 YP_001195762.1 CDS Fjoh_3429 NC_009441.1 4096495 4097268 R TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase complement(4096495..4097268) Flavobacterium johnsoniae UW101 5093677 YP_001195763.1 CDS Fjoh_3430 NC_009441.1 4097378 4098325 R PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase carbamoyl phosphate-binding subunit complement(4097378..4098325) Flavobacterium johnsoniae UW101 5093678 YP_001195764.1 CDS Fjoh_3431 NC_009441.1 4098466 4099227 R PFAM: aspartate/glutamate/uridylate kinase; glutamate 5-kinase complement(4098466..4099227) Flavobacterium johnsoniae UW101 5093679 YP_001195765.1 CDS Fjoh_3432 NC_009441.1 4099413 4100606 R TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(4099413..4100606) Flavobacterium johnsoniae UW101 5093680 YP_001195766.1 CDS Fjoh_3433 NC_009441.1 4100708 4101847 R PFAM: aminotransferase class-III; class III aminotransferase complement(4100708..4101847) Flavobacterium johnsoniae UW101 5093681 YP_001195767.1 CDS argC NC_009441.1 4101942 4102919 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(4101942..4102919) Flavobacterium johnsoniae UW101 5093682 YP_001195768.1 CDS Fjoh_3435 NC_009441.1 4102912 4104105 R PFAM: argininosuccinate synthase; ExsB family protein; argininosuccinate synthase complement(4102912..4104105) Flavobacterium johnsoniae UW101 5089636 YP_001195769.1 CDS Fjoh_3436 NC_009441.1 4104161 4104808 R hypothetical protein complement(4104161..4104808) Flavobacterium johnsoniae UW101 5089637 YP_001195770.1 CDS Fjoh_3437 NC_009441.1 4105362 4107632 R aminopeptidase N-like protein complement(4105362..4107632) Flavobacterium johnsoniae UW101 5089638 YP_001195771.1 CDS Fjoh_3438 NC_009441.1 4107822 4108676 D PFAM: Aldose 1-epimerase; aldose 1-epimerase 4107822..4108676 Flavobacterium johnsoniae UW101 5089639 YP_001195772.1 CDS Fjoh_3439 NC_009441.1 4108676 4109224 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4108676..4109224 Flavobacterium johnsoniae UW101 5089640 YP_001195773.1 CDS Fjoh_3440 NC_009441.1 4109345 4109899 D hypothetical protein 4109345..4109899 Flavobacterium johnsoniae UW101 5089641 YP_001195774.1 CDS Fjoh_3441 NC_009441.1 4109901 4110125 R hypothetical protein complement(4109901..4110125) Flavobacterium johnsoniae UW101 5089642 YP_001195775.1 CDS Fjoh_3442 NC_009441.1 4110222 4110860 R hypothetical protein complement(4110222..4110860) Flavobacterium johnsoniae UW101 5089643 YP_001195776.1 CDS smpB NC_009441.1 4110999 4111454 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 4110999..4111454 Flavobacterium johnsoniae UW101 5089644 YP_001195777.1 CDS Fjoh_3444 NC_009441.1 4111532 4112173 D hypothetical protein 4111532..4112173 Flavobacterium johnsoniae UW101 5089645 YP_001195778.1 CDS Fjoh_3445 NC_009441.1 4112258 4113265 D PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 4112258..4113265 Flavobacterium johnsoniae UW101 5089646 YP_001195779.1 CDS Fjoh_3446 NC_009441.1 4113295 4113936 R TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(4113295..4113936) Flavobacterium johnsoniae UW101 5089647 YP_001195780.1 CDS Fjoh_3447 NC_009441.1 4114148 4115113 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; homoserine dehydrogenase, NAD-binding; oxidoreductase domain-containing protein 4114148..4115113 Flavobacterium johnsoniae UW101 5089648 YP_001195781.1 CDS Fjoh_3448 NC_009441.1 4115202 4116089 D PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; 3-hydroxybutyryl-CoA dehydrogenase 4115202..4116089 Flavobacterium johnsoniae UW101 5089649 YP_001195782.1 CDS Fjoh_3449 NC_009441.1 4116102 4116761 D PFAM: alanine racemase domain protein; alanine racemase 4116102..4116761 Flavobacterium johnsoniae UW101 5089650 YP_001195783.1 CDS Fjoh_3450 NC_009441.1 4116824 4117171 D hypothetical protein 4116824..4117171 Flavobacterium johnsoniae UW101 5089651 YP_001195784.1 CDS Fjoh_3451 NC_009441.1 4117274 4118635 D TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Excinuclease ABC, C subunit domain protein; Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 4117274..4118635 Flavobacterium johnsoniae UW101 5089652 YP_001195785.1 CDS Fjoh_3452 NC_009441.1 4118666 4119505 D PFAM: Ion transport protein; Ion transport 2 domain protein; Ion transport protein 4118666..4119505 Flavobacterium johnsoniae UW101 5089653 YP_001195786.1 CDS miaA NC_009441.1 4119658 4120587 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 4119658..4120587 Flavobacterium johnsoniae UW101 5089654 YP_001195787.1 CDS Fjoh_3454 NC_009441.1 4120603 4121349 D PFAM: acyl-ACP thioesterase; acyl-ACP thioesterase 4120603..4121349 Flavobacterium johnsoniae UW101 5089655 YP_001195788.1 CDS Fjoh_3455 NC_009441.1 4121564 4122097 R hypothetical protein complement(4121564..4122097) Flavobacterium johnsoniae UW101 5089656 YP_001195789.1 CDS prfH NC_009441.1 4122084 4122773 R similar to release factor 1 and 2; peptide chain release factor-like protein complement(4122084..4122773) Flavobacterium johnsoniae UW101 5089657 YP_001195790.1 CDS Fjoh_3457 NC_009441.1 4122761 4123384 R hypothetical protein complement(4122761..4123384) Flavobacterium johnsoniae UW101 5089658 YP_001195791.1 CDS Fjoh_3458 NC_009441.1 4123397 4124788 R PFAM: protein of unknown function UPF0027; hypothetical protein complement(4123397..4124788) Flavobacterium johnsoniae UW101 5089659 YP_001195792.1 CDS Fjoh_3459 NC_009441.1 4124792 4125538 R hypothetical protein complement(4124792..4125538) Flavobacterium johnsoniae UW101 5089660 YP_001195793.1 CDS Fjoh_3460 NC_009441.1 4126177 4126893 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(4126177..4126893) Flavobacterium johnsoniae UW101 5089661 YP_001195794.1 CDS Fjoh_3461 NC_009441.1 4126897 4128483 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase complement(4126897..4128483) Flavobacterium johnsoniae UW101 5089662 YP_001195795.1 CDS Fjoh_3462 NC_009441.1 4128543 4129139 R TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(4128543..4129139) Flavobacterium johnsoniae UW101 5089663 YP_001195796.1 CDS Fjoh_3463 NC_009441.1 4129141 4130139 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4129141..4130139) Flavobacterium johnsoniae UW101 5089664 YP_001195797.1 CDS Fjoh_3464 NC_009441.1 4130263 4131453 R enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase complement(4130263..4131453) Flavobacterium johnsoniae UW101 5089665 YP_001195798.1 CDS Fjoh_3465 NC_009441.1 4131553 4133205 R TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN complement(4131553..4133205) Flavobacterium johnsoniae UW101 5089666 YP_001195799.1 CDS Fjoh_3466 NC_009441.1 4133261 4134145 R hypothetical protein complement(4133261..4134145) Flavobacterium johnsoniae UW101 5089667 YP_001195800.1 CDS Fjoh_3467 NC_009441.1 4134217 4135431 R TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(4134217..4135431) Flavobacterium johnsoniae UW101 5089668 YP_001195801.1 CDS Fjoh_3468 NC_009441.1 4135444 4135761 R hypothetical protein complement(4135444..4135761) Flavobacterium johnsoniae UW101 5089669 YP_001195802.1 CDS Fjoh_3469 NC_009441.1 4135770 4136564 R DNA uptake lipoprotein-like protein complement(4135770..4136564) Flavobacterium johnsoniae UW101 5089670 YP_001195803.1 CDS Fjoh_3470 NC_009441.1 4136702 4137583 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(4136702..4137583) Flavobacterium johnsoniae UW101 5089671 YP_001195804.1 CDS Fjoh_3471 NC_009441.1 4137600 4138112 R hypothetical protein complement(4137600..4138112) Flavobacterium johnsoniae UW101 5089672 YP_001195805.1 CDS Fjoh_3472 NC_009441.1 4138159 4138938 D PFAM: 5'-Nucleotidase domain protein; 5'-nucleotidase domain-containing protein 4138159..4138938 Flavobacterium johnsoniae UW101 5089673 YP_001195806.1 CDS Fjoh_3473 NC_009441.1 4138989 4139900 D PFAM: metallophosphoesterase; metallophosphoesterase 4138989..4139900 Flavobacterium johnsoniae UW101 5089674 YP_001195807.1 CDS Fjoh_3474 NC_009441.1 4139886 4140497 R hypothetical protein complement(4139886..4140497) Flavobacterium johnsoniae UW101 5089675 YP_001195808.1 CDS Fjoh_3475 NC_009441.1 4140568 4142574 R TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: NAD-dependent DNA ligase-like; NAD-dependent DNA ligase complement(4140568..4142574) Flavobacterium johnsoniae UW101 5089676 YP_001195809.1 CDS Fjoh_3476 NC_009441.1 4142821 4144758 R PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; OmpA/MotB domain-containing protein complement(4142821..4144758) Flavobacterium johnsoniae UW101 5089677 YP_001195810.1 CDS Fjoh_3477 NC_009441.1 4144770 4145702 R hypothetical protein complement(4144770..4145702) Flavobacterium johnsoniae UW101 5089678 YP_001195811.1 CDS Fjoh_3478 NC_009441.1 4145749 4156962 R TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; hypothetical protein complement(4145749..4156962) Flavobacterium johnsoniae UW101 5089679 YP_001195812.1 CDS Fjoh_3479 NC_009441.1 4158099 4158572 R hypothetical protein complement(4158099..4158572) Flavobacterium johnsoniae UW101 5089680 YP_001195813.1 CDS rplI NC_009441.1 4158712 4159152 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(4158712..4159152) Flavobacterium johnsoniae UW101 5089681 YP_001195814.1 CDS rpsR NC_009441.1 4159221 4159517 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(4159221..4159517) Flavobacterium johnsoniae UW101 5089682 YP_001195815.1 CDS rpsF NC_009441.1 4159523 4159864 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(4159523..4159864) Flavobacterium johnsoniae UW101 5089683 YP_001195816.1 CDS Fjoh_3483 NC_009441.1 4160042 4160737 D PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 4160042..4160737 Flavobacterium johnsoniae UW101 5089684 YP_001195817.1 CDS Fjoh_3484 NC_009441.1 4160740 4163187 R TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; primosomal protein N' complement(4160740..4163187) Flavobacterium johnsoniae UW101 5089685 YP_001195818.1 CDS Fjoh_3485 NC_009441.1 4163212 4163958 R PFAM: beta-lactamase domain protein; beta-lactamase complement(4163212..4163958) Flavobacterium johnsoniae UW101 5089686 YP_001195819.1 CDS Fjoh_3486 NC_009441.1 4163972 4164400 R hypothetical protein complement(4163972..4164400) Flavobacterium johnsoniae UW101 5089687 YP_001195820.1 CDS Fjoh_3487 NC_009441.1 4164402 4165325 R TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; ribonuclease BN complement(4164402..4165325) Flavobacterium johnsoniae UW101 5089688 YP_001195821.1 CDS Fjoh_3488 NC_009441.1 4165388 4166245 R TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(4165388..4166245) Flavobacterium johnsoniae UW101 5089689 YP_001195822.1 CDS Fjoh_3489 NC_009441.1 4166451 4167551 D PFAM: HEAT domain containing protein; heat domain-containing protein 4166451..4167551 Flavobacterium johnsoniae UW101 5089690 YP_001195823.1 CDS Fjoh_3490 NC_009441.1 4167870 4168751 D PFAM: Pirin domain protein domain protein; Pirin domain protein; pirin 4167870..4168751 Flavobacterium johnsoniae UW101 5089691 YP_001195824.1 CDS Fjoh_3491 NC_009441.1 4168754 4169149 D PFAM: OsmC family protein; OsmC family protein 4168754..4169149 Flavobacterium johnsoniae UW101 5091169 YP_001195825.1 CDS Fjoh_3492 NC_009441.1 4169155 4169439 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4169155..4169439 Flavobacterium johnsoniae UW101 5091170 YP_001195826.1 CDS Fjoh_3493 NC_009441.1 4169697 4171112 D PFAM: adenosine/AMP deaminase; adenosine/AMP deaminase 4169697..4171112 Flavobacterium johnsoniae UW101 5091171 YP_001195827.1 CDS Fjoh_3494 NC_009441.1 4171222 4171524 D PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4171222..4171524 Flavobacterium johnsoniae UW101 5091172 YP_001195828.1 CDS Fjoh_3495 NC_009441.1 4171624 4172097 D SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 4171624..4172097 Flavobacterium johnsoniae UW101 5091173 YP_001195829.1 CDS Fjoh_3496 NC_009441.1 4172129 4172761 R hypothetical protein complement(4172129..4172761) Flavobacterium johnsoniae UW101 5091174 YP_001195830.1 CDS Fjoh_3497 NC_009441.1 4172767 4173588 R TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase complement(4172767..4173588) Flavobacterium johnsoniae UW101 5091175 YP_001195831.1 CDS Fjoh_3498 NC_009441.1 4173793 4174335 D PFAM: protein of unknown function DUF1599; hypothetical protein 4173793..4174335 Flavobacterium johnsoniae UW101 5091176 YP_001195832.1 CDS Fjoh_3499 NC_009441.1 4174408 4175529 D PFAM: DoxX family protein; DoxX family protein 4174408..4175529 Flavobacterium johnsoniae UW101 5091177 YP_001195833.1 CDS Fjoh_3500 NC_009441.1 4175622 4176095 D hypothetical protein 4175622..4176095 Flavobacterium johnsoniae UW101 5091178 YP_001195834.1 CDS Fjoh_3501 NC_009441.1 4176317 4176985 D hypothetical protein 4176317..4176985 Flavobacterium johnsoniae UW101 5091179 YP_001195835.1 CDS Fjoh_3502 NC_009441.1 4177070 4177528 D hypothetical protein 4177070..4177528 Flavobacterium johnsoniae UW101 5091180 YP_001195836.1 CDS Fjoh_3503 NC_009441.1 4177849 4178343 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 4177849..4178343 Flavobacterium johnsoniae UW101 5091181 YP_001195837.1 CDS tpiA NC_009441.1 4178433 4179185 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 4178433..4179185 Flavobacterium johnsoniae UW101 5091182 YP_001195838.1 CDS Fjoh_3505 NC_009441.1 4179285 4181609 R hypothetical protein complement(4179285..4181609) Flavobacterium johnsoniae UW101 5091183 YP_001195839.1 CDS Fjoh_3506 NC_009441.1 4181596 4182732 R hypothetical protein complement(4181596..4182732) Flavobacterium johnsoniae UW101 5091184 YP_001195840.1 CDS prmA NC_009441.1 4182800 4183681 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 4182800..4183681 Flavobacterium johnsoniae UW101 5091185 YP_001195841.1 CDS Fjoh_3508 NC_009441.1 4183714 4183989 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 4183714..4183989 Flavobacterium johnsoniae UW101 5091186 YP_001195842.1 CDS Fjoh_3509 NC_009441.1 4184055 4185335 D sterol desaturase-like protein 4184055..4185335 Flavobacterium johnsoniae UW101 5091187 YP_001195843.1 CDS Fjoh_3510 NC_009441.1 4185335 4186012 D PFAM: YhhN family protein; hypothetical protein 4185335..4186012 Flavobacterium johnsoniae UW101 5091188 YP_001195844.1 CDS Fjoh_3511 NC_009441.1 4186119 4186571 D hypothetical protein 4186119..4186571 Flavobacterium johnsoniae UW101 5091189 YP_001195845.1 CDS Fjoh_3512 NC_009441.1 4186610 4186936 D hypothetical protein 4186610..4186936 Flavobacterium johnsoniae UW101 5091190 YP_001195846.1 CDS Fjoh_3513 NC_009441.1 4187143 4187994 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 4187143..4187994 Flavobacterium johnsoniae UW101 5091191 YP_001195847.1 CDS Fjoh_3514 NC_009441.1 4188014 4188919 D hypothetical protein 4188014..4188919 Flavobacterium johnsoniae UW101 5091192 YP_001195848.1 CDS Fjoh_3515 NC_009441.1 4189022 4189699 D member of the NlpC/P60 superfamily of peptidases; peptidoglycan peptidase 4189022..4189699 Flavobacterium johnsoniae UW101 5091193 YP_001195849.1 CDS Fjoh_3516 NC_009441.1 4189790 4190242 D hypothetical protein 4189790..4190242 Flavobacterium johnsoniae UW101 5091194 YP_001195850.1 CDS Fjoh_3517 NC_009441.1 4190247 4190555 D hypothetical protein 4190247..4190555 Flavobacterium johnsoniae UW101 5091195 YP_001195851.1 CDS Fjoh_3518 NC_009441.1 4190623 4192014 R PFAM: peptidase M20; peptidase M28; peptidase M28 complement(4190623..4192014) Flavobacterium johnsoniae UW101 5091196 YP_001195852.1 CDS Fjoh_3519 NC_009441.1 4192181 4194103 R PFAM: coagulation factor 5/8 type domain protein; Fibronectin, type III domain protein; glycoside hydrolase, family 43; coagulation factor 5/8 type domain-containing protein complement(4192181..4194103) Flavobacterium johnsoniae UW101 5091197 YP_001195853.1 CDS Fjoh_3520 NC_009441.1 4194131 4194904 R PFAM: glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(4194131..4194904) Flavobacterium johnsoniae UW101 5091198 YP_001195854.1 CDS Fjoh_3521 NC_009441.1 4194994 4197294 R PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 protein complement(4194994..4197294) Flavobacterium johnsoniae UW101 5091199 YP_001195855.1 CDS Fjoh_3522 NC_009441.1 4197305 4198018 R PFAM: phospholipase/Carboxylesterase; phospholipase/carboxylesterase complement(4197305..4198018) Flavobacterium johnsoniae UW101 5091200 YP_001195856.1 CDS Fjoh_3523 NC_009441.1 4198025 4199398 R hypothetical protein complement(4198025..4199398) Flavobacterium johnsoniae UW101 5091201 YP_001195857.1 CDS Fjoh_3524 NC_009441.1 4199474 4200937 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(4199474..4200937) Flavobacterium johnsoniae UW101 5091202 YP_001195858.1 CDS Fjoh_3525 NC_009441.1 4200942 4203944 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(4200942..4203944) Flavobacterium johnsoniae UW101 5091203 YP_001195859.1 CDS Fjoh_3526 NC_009441.1 4204189 4206954 R response regulator receiver protein complement(4204189..4206954) Flavobacterium johnsoniae UW101 5091204 YP_001195860.1 CDS Fjoh_3527 NC_009441.1 4207002 4207427 R hypothetical protein complement(4207002..4207427) Flavobacterium johnsoniae UW101 5091205 YP_001195861.1 CDS Fjoh_3528 NC_009441.1 4207451 4208635 R TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase complement(4207451..4208635) Flavobacterium johnsoniae UW101 5091206 YP_001195862.1 CDS Fjoh_3529 NC_009441.1 4208789 4210882 R catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase complement(4208789..4210882) Flavobacterium johnsoniae UW101 5091207 YP_001195863.1 CDS Fjoh_3530 NC_009441.1 4210950 4212023 R TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; magnesium and cobalt transport protein CorA complement(4210950..4212023) Flavobacterium johnsoniae UW101 5091208 YP_001195864.1 CDS Fjoh_3531 NC_009441.1 4212504 4213196 R hypothetical protein complement(4212504..4213196) Flavobacterium johnsoniae UW101 5091209 YP_001195865.1 CDS Fjoh_3532 NC_009441.1 4213480 4215861 R hypothetical protein complement(4213480..4215861) Flavobacterium johnsoniae UW101 5091210 YP_001195866.1 CDS Fjoh_3533 NC_009441.1 4216051 4217457 R hypothetical protein complement(4216051..4217457) Flavobacterium johnsoniae UW101 5091211 YP_001195867.1 CDS Fjoh_3534 NC_009441.1 4217758 4218477 R hypothetical protein complement(4217758..4218477) Flavobacterium johnsoniae UW101 5091212 YP_001195868.1 CDS Fjoh_3535 NC_009441.1 4218434 4224805 R hypothetical protein complement(4218434..4224805) Flavobacterium johnsoniae UW101 5091213 YP_001195869.1 CDS Fjoh_3536 NC_009441.1 4225242 4225535 R hypothetical protein complement(4225242..4225535) Flavobacterium johnsoniae UW101 5091214 YP_001195870.1 CDS Fjoh_3537 NC_009441.1 4225541 4226680 R hypothetical protein complement(4225541..4226680) Flavobacterium johnsoniae UW101 5091215 YP_001195871.1 CDS Fjoh_3538 NC_009441.1 4226713 4227552 R hypothetical protein complement(4226713..4227552) Flavobacterium johnsoniae UW101 5091216 YP_001195872.1 CDS Fjoh_3539 NC_009441.1 4227569 4228858 R hypothetical protein complement(4227569..4228858) Flavobacterium johnsoniae UW101 5091217 YP_001195873.1 CDS Fjoh_3540 NC_009441.1 4229133 4229696 R hypothetical protein complement(4229133..4229696) Flavobacterium johnsoniae UW101 5091218 YP_001195874.1 CDS Fjoh_3541 NC_009441.1 4229766 4230965 R PFAM: TraJ family protein conjugative transposon; TraJ family protein conjugative transposon complement(4229766..4230965) Flavobacterium johnsoniae UW101 5091219 YP_001195875.1 CDS Fjoh_3542 NC_009441.1 4230979 4231614 R hypothetical protein complement(4230979..4231614) Flavobacterium johnsoniae UW101 5091220 YP_001195876.1 CDS Fjoh_3543 NC_009441.1 4231629 4232240 R hypothetical protein complement(4231629..4232240) Flavobacterium johnsoniae UW101 5091221 YP_001195877.1 CDS Fjoh_3544 NC_009441.1 4232255 4232938 R hypothetical protein complement(4232255..4232938) Flavobacterium johnsoniae UW101 5091222 YP_001195878.1 CDS Fjoh_3545 NC_009441.1 4232948 4235383 R Type IV secretory pathway VirB4 components-like protein complement(4232948..4235383) Flavobacterium johnsoniae UW101 5091223 YP_001195879.1 CDS Fjoh_3546 NC_009441.1 4235397 4236047 R hypothetical protein complement(4235397..4236047) Flavobacterium johnsoniae UW101 5093428 YP_001195880.1 CDS Fjoh_3547 NC_009441.1 4236080 4236391 R hypothetical protein complement(4236080..4236391) Flavobacterium johnsoniae UW101 5093429 YP_001195881.1 CDS Fjoh_3548 NC_009441.1 4236391 4236726 R hypothetical protein complement(4236391..4236726) Flavobacterium johnsoniae UW101 5093430 YP_001195882.1 CDS Fjoh_3549 NC_009441.1 4236854 4237324 R hypothetical protein complement(4236854..4237324) Flavobacterium johnsoniae UW101 5093431 YP_001195883.1 CDS Fjoh_3550 NC_009441.1 4237516 4238778 R hypothetical protein complement(4237516..4238778) Flavobacterium johnsoniae UW101 5093432 YP_001195884.1 CDS Fjoh_3551 NC_009441.1 4238750 4239445 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(4238750..4239445) Flavobacterium johnsoniae UW101 5093433 YP_001195885.1 CDS Fjoh_3552 NC_009441.1 4239930 4240628 R hypothetical protein complement(4239930..4240628) Flavobacterium johnsoniae UW101 5093434 YP_001195886.1 CDS Fjoh_3553 NC_009441.1 4240960 4242636 D PFAM: TPR repeat-containing protein; SMART: helix-turn-helix- domain containing protein, AraC type; Tetratricopeptide domain protein; hypothetical protein 4240960..4242636 Flavobacterium johnsoniae UW101 5093435 YP_001195887.1 CDS Fjoh_3554 NC_009441.1 4242701 4242877 D hypothetical protein 4242701..4242877 Flavobacterium johnsoniae UW101 5093436 YP_001195888.1 CDS Fjoh_3555 NC_009441.1 4242898 4243227 R hypothetical protein complement(4242898..4243227) Flavobacterium johnsoniae UW101 5093437 YP_001195889.1 CDS Fjoh_3556 NC_009441.1 4243737 4246772 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 4243737..4246772 Flavobacterium johnsoniae UW101 5093438 YP_001195890.1 CDS Fjoh_3557 NC_009441.1 4246777 4248180 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 4246777..4248180 Flavobacterium johnsoniae UW101 5093439 YP_001195891.1 CDS Fjoh_3558 NC_009441.1 4248167 4250779 D PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 4248167..4250779 Flavobacterium johnsoniae UW101 5093440 YP_001195892.1 CDS Fjoh_3559 NC_009441.1 4250861 4251130 R hypothetical protein complement(4250861..4251130) Flavobacterium johnsoniae UW101 5093441 YP_001195893.1 CDS Fjoh_3560 NC_009441.1 4251209 4252732 R hypothetical protein complement(4251209..4252732) Flavobacterium johnsoniae UW101 5093442 YP_001195894.1 CDS Fjoh_3561 NC_009441.1 4252938 4253228 R hypothetical protein complement(4252938..4253228) Flavobacterium johnsoniae UW101 5093443 YP_001195895.1 CDS Fjoh_3562 NC_009441.1 4253521 4253910 D hypothetical protein 4253521..4253910 Flavobacterium johnsoniae UW101 5093444 YP_001195896.1 CDS Fjoh_3563 NC_009441.1 4253898 4255163 D PFAM: Relaxase/mobilization nuclease; relaxase/mobilization nuclease 4253898..4255163 Flavobacterium johnsoniae UW101 5093445 YP_001195897.1 CDS Fjoh_3564 NC_009441.1 4255183 4257171 D Type IV secretory pathway VirD4 components-like protein 4255183..4257171 Flavobacterium johnsoniae UW101 5093446 YP_001195898.1 CDS Fjoh_3565 NC_009441.1 4257237 4257656 R hypothetical protein complement(4257237..4257656) Flavobacterium johnsoniae UW101 5093447 YP_001195899.1 CDS Fjoh_3566 NC_009441.1 4257820 4258110 D hypothetical protein 4257820..4258110 Flavobacterium johnsoniae UW101 5093448 YP_001195900.1 CDS Fjoh_3567 NC_009441.1 4258185 4258631 R PFAM: response regulator receiver; response regulator receiver protein complement(4258185..4258631) Flavobacterium johnsoniae UW101 5093449 YP_001195901.1 CDS Fjoh_3568 NC_009441.1 4259064 4260245 D PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase 4259064..4260245 Flavobacterium johnsoniae UW101 5093450 YP_001195902.1 CDS Fjoh_3569 NC_009441.1 4260249 4263302 D TIGRFAM: DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 4260249..4263302 Flavobacterium johnsoniae UW101 5093451 YP_001195903.1 CDS Fjoh_3570 NC_009441.1 4263592 4264218 D PFAM: protein of unknown function DUF159; hypothetical protein 4263592..4264218 Flavobacterium johnsoniae UW101 5093452 YP_001195904.1 CDS Fjoh_3571 NC_009441.1 4264230 4264676 D hypothetical protein 4264230..4264676 Flavobacterium johnsoniae UW101 5093453 YP_001195905.1 CDS Fjoh_3572 NC_009441.1 4264736 4265038 R hypothetical protein complement(4264736..4265038) Flavobacterium johnsoniae UW101 5093454 YP_001195906.1 CDS Fjoh_3573 NC_009441.1 4265122 4265829 R hypothetical protein complement(4265122..4265829) Flavobacterium johnsoniae UW101 5093455 YP_001195907.1 CDS Fjoh_3574 NC_009441.1 4265900 4267306 R hypothetical protein complement(4265900..4267306) Flavobacterium johnsoniae UW101 5093456 YP_001195908.1 CDS Fjoh_3575 NC_009441.1 4267780 4268571 D hypothetical protein 4267780..4268571 Flavobacterium johnsoniae UW101 5093457 YP_001195909.1 CDS Fjoh_3576 NC_009441.1 4268573 4271719 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 4268573..4271719 Flavobacterium johnsoniae UW101 5093458 YP_001195910.1 CDS Fjoh_3577 NC_009441.1 4271882 4272553 D hypothetical protein 4271882..4272553 Flavobacterium johnsoniae UW101 5093459 YP_001195911.1 CDS Fjoh_3578 NC_009441.1 4273522 4273911 D PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein/primosomal replication protein n 4273522..4273911 Flavobacterium johnsoniae UW101 5093460 YP_001195912.1 CDS Fjoh_3579 NC_009441.1 4273951 4274313 D hypothetical protein 4273951..4274313 Flavobacterium johnsoniae UW101 5093461 YP_001195913.1 CDS Fjoh_3580 NC_009441.1 4274337 4274747 D hypothetical protein 4274337..4274747 Flavobacterium johnsoniae UW101 5093462 YP_001195914.1 CDS Fjoh_3581 NC_009441.1 4274744 4276060 D hypothetical protein 4274744..4276060 Flavobacterium johnsoniae UW101 5093463 YP_001195915.1 CDS Fjoh_3582 NC_009441.1 4276305 4276775 D PFAM: DNA repair protein RadC; DNA repair protein RadC 4276305..4276775 Flavobacterium johnsoniae UW101 5093464 YP_001195916.1 CDS Fjoh_3583 NC_009441.1 4277174 4277971 D hypothetical protein 4277174..4277971 Flavobacterium johnsoniae UW101 5093465 YP_001195917.1 CDS Fjoh_3584 NC_009441.1 4278124 4280157 D hypothetical protein 4278124..4280157 Flavobacterium johnsoniae UW101 5093466 YP_001195918.1 CDS Fjoh_3585 NC_009441.1 4280746 4281042 R hypothetical protein complement(4280746..4281042) Flavobacterium johnsoniae UW101 5093467 YP_001195919.1 CDS Fjoh_3586 NC_009441.1 4281189 4282055 R hypothetical protein complement(4281189..4282055) Flavobacterium johnsoniae UW101 5093468 YP_001195920.1 CDS Fjoh_3587 NC_009441.1 4282190 4283146 R hypothetical protein complement(4282190..4283146) Flavobacterium johnsoniae UW101 5093469 YP_001195921.1 CDS Fjoh_3588 NC_009441.1 4283549 4284178 R hypothetical protein complement(4283549..4284178) Flavobacterium johnsoniae UW101 5093470 YP_001195922.1 CDS Fjoh_3589 NC_009441.1 4284324 4284878 R hypothetical protein complement(4284324..4284878) Flavobacterium johnsoniae UW101 5093471 YP_001195923.1 CDS Fjoh_3590 NC_009441.1 4285411 4285749 R TIGRFAM: DNA binding domain, excisionase family; DNA binding domain-containing protein complement(4285411..4285749) Flavobacterium johnsoniae UW101 5093472 YP_001195924.1 CDS Fjoh_3591 NC_009441.1 4285859 4286596 R hypothetical protein complement(4285859..4286596) Flavobacterium johnsoniae UW101 5093473 YP_001195925.1 CDS Fjoh_3592 NC_009441.1 4286593 4287852 R PFAM: phage integrase; phage integrase complement(4286593..4287852) Flavobacterium johnsoniae UW101 5093474 YP_001195926.1 CDS Fjoh_3593 NC_009441.1 4287849 4288403 R hypothetical protein complement(4287849..4288403) Flavobacterium johnsoniae UW101 5093475 YP_001195927.1 CDS Fjoh_3594 NC_009441.1 4288639 4289595 D hypothetical protein 4288639..4289595 Flavobacterium johnsoniae UW101 5093476 YP_001195928.1 CDS Fjoh_3595 NC_009441.1 4290792 4292000 D hypothetical protein 4290792..4292000 Flavobacterium johnsoniae UW101 5093477 YP_001195929.1 CDS Fjoh_3596 NC_009441.1 4292049 4293203 D hypothetical protein 4292049..4293203 Flavobacterium johnsoniae UW101 5093478 YP_001195930.1 CDS Fjoh_3597 NC_009441.1 4293364 4294359 D hypothetical protein 4293364..4294359 Flavobacterium johnsoniae UW101 5093479 YP_001195931.1 CDS Fjoh_3598 NC_009441.1 4294715 4295689 D hypothetical protein 4294715..4295689 Flavobacterium johnsoniae UW101 5093480 YP_001195932.1 CDS Fjoh_3599 NC_009441.1 4295953 4296744 D hypothetical protein 4295953..4296744 Flavobacterium johnsoniae UW101 5093481 YP_001195933.1 CDS Fjoh_3600 NC_009441.1 4297029 4297973 D hypothetical protein 4297029..4297973 Flavobacterium johnsoniae UW101 5093482 YP_001195934.1 CDS Fjoh_3601 NC_009441.1 4298032 4298565 D hypothetical protein 4298032..4298565 Flavobacterium johnsoniae UW101 5093483 YP_001195935.1 CDS Fjoh_3602 NC_009441.1 4298808 4299581 D SMART: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase 4298808..4299581 Flavobacterium johnsoniae UW101 5092526 YP_001195936.1 CDS Fjoh_3603 NC_009441.1 4300098 4300643 D hypothetical protein 4300098..4300643 Flavobacterium johnsoniae UW101 5092527 YP_001195937.1 CDS Fjoh_3604 NC_009441.1 4300636 4301142 D hypothetical protein 4300636..4301142 Flavobacterium johnsoniae UW101 5092528 YP_001195938.1 CDS Fjoh_3605 NC_009441.1 4301348 4302490 D hypothetical protein 4301348..4302490 Flavobacterium johnsoniae UW101 5092529 YP_001195939.1 CDS Fjoh_3606 NC_009441.1 4302870 4304042 D hypothetical protein 4302870..4304042 Flavobacterium johnsoniae UW101 5092530 YP_001195940.1 CDS Fjoh_3607 NC_009441.1 4304362 4306056 D hypothetical protein 4304362..4306056 Flavobacterium johnsoniae UW101 5092531 YP_001195941.1 CDS Fjoh_3608 NC_009441.1 4306714 4306998 D hypothetical protein 4306714..4306998 Flavobacterium johnsoniae UW101 5092532 YP_001195942.1 CDS Fjoh_3609 NC_009441.1 4307635 4307973 R PFAM: Insertion element protein; insertion element protein complement(4307635..4307973) Flavobacterium johnsoniae UW101 5092533 YP_001195943.1 CDS Fjoh_3610 NC_009441.1 4308582 4309274 R hypothetical protein complement(4308582..4309274) Flavobacterium johnsoniae UW101 5092534 YP_001195944.1 CDS Fjoh_3611 NC_009441.1 4309411 4310070 R PFAM: Insertion element protein; IS1 transposase; IS1 transposase complement(4309411..4310070) Flavobacterium johnsoniae UW101 5092535 YP_001195945.1 CDS Fjoh_3612 NC_009441.1 4310277 4310777 R hypothetical protein complement(4310277..4310777) Flavobacterium johnsoniae UW101 5092536 YP_001195946.1 CDS Fjoh_3613 NC_009441.1 4310797 4311561 R hypothetical protein complement(4310797..4311561) Flavobacterium johnsoniae UW101 5092537 YP_001195947.1 CDS Fjoh_3614 NC_009441.1 4311787 4312239 R hypothetical protein complement(4311787..4312239) Flavobacterium johnsoniae UW101 5092538 YP_001195948.1 CDS Fjoh_3615 NC_009441.1 4312236 4312748 R hypothetical protein complement(4312236..4312748) Flavobacterium johnsoniae UW101 5092539 YP_001195949.1 CDS Fjoh_3616 NC_009441.1 4312846 4313718 R PFAM: phage integrase; phage integrase complement(4312846..4313718) Flavobacterium johnsoniae UW101 5092540 YP_001195950.1 CDS Fjoh_3617 NC_009441.1 4313729 4314646 R PFAM: phage integrase; phage integrase complement(4313729..4314646) Flavobacterium johnsoniae UW101 5092541 YP_001195951.1 CDS Fjoh_3618 NC_009441.1 4314815 4316485 R hypothetical protein complement(4314815..4316485) Flavobacterium johnsoniae UW101 5092542 YP_001195952.1 CDS Fjoh_3619 NC_009441.1 4316490 4317116 R hypothetical protein complement(4316490..4317116) Flavobacterium johnsoniae UW101 5092543 YP_001195953.1 CDS Fjoh_3620 NC_009441.1 4317537 4317974 R hypothetical protein complement(4317537..4317974) Flavobacterium johnsoniae UW101 5092544 YP_001195954.1 CDS Fjoh_3621 NC_009441.1 4318194 4318874 D hypothetical protein 4318194..4318874 Flavobacterium johnsoniae UW101 5092545 YP_001195955.1 CDS Fjoh_3622 NC_009441.1 4318913 4319230 D hypothetical protein 4318913..4319230 Flavobacterium johnsoniae UW101 5092546 YP_001195956.1 CDS Fjoh_3623 NC_009441.1 4320328 4320669 R hypothetical protein complement(4320328..4320669) Flavobacterium johnsoniae UW101 5092547 YP_001195957.1 CDS Fjoh_3624 NC_009441.1 4320725 4321285 R hypothetical protein complement(4320725..4321285) Flavobacterium johnsoniae UW101 5092548 YP_001195958.1 CDS Fjoh_3625 NC_009441.1 4321297 4321659 R hypothetical protein complement(4321297..4321659) Flavobacterium johnsoniae UW101 5092549 YP_001195959.1 CDS Fjoh_3626 NC_009441.1 4321646 4322482 R hypothetical protein complement(4321646..4322482) Flavobacterium johnsoniae UW101 5092550 YP_001195960.1 CDS Fjoh_3627 NC_009441.1 4322494 4324131 R hypothetical protein complement(4322494..4324131) Flavobacterium johnsoniae UW101 5092551 YP_001195961.1 CDS Fjoh_3628 NC_009441.1 4324305 4324712 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 4324305..4324712 Flavobacterium johnsoniae UW101 5092552 YP_001195962.1 CDS Fjoh_3629 NC_009441.1 4324817 4325068 D hypothetical protein 4324817..4325068 Flavobacterium johnsoniae UW101 5092553 YP_001195963.1 CDS Fjoh_3630 NC_009441.1 4325137 4326963 D PFAM: KAP P-loop domain protein; KAP P-loop domain-containing protein 4325137..4326963 Flavobacterium johnsoniae UW101 5092554 YP_001195964.1 CDS Fjoh_3631 NC_009441.1 4326985 4327413 R hypothetical protein complement(4326985..4327413) Flavobacterium johnsoniae UW101 5092555 YP_001195965.1 CDS Fjoh_3632 NC_009441.1 4328035 4328715 D hypothetical protein 4328035..4328715 Flavobacterium johnsoniae UW101 5092556 YP_001195966.1 CDS Fjoh_3633 NC_009441.1 4328897 4329676 D hypothetical protein 4328897..4329676 Flavobacterium johnsoniae UW101 5092557 YP_001195967.1 CDS Fjoh_3634 NC_009441.1 4329705 4330139 D hypothetical protein 4329705..4330139 Flavobacterium johnsoniae UW101 5092558 YP_001195968.1 CDS Fjoh_3635 NC_009441.1 4330165 4330761 D hypothetical protein 4330165..4330761 Flavobacterium johnsoniae UW101 5092559 YP_001195969.1 CDS Fjoh_3636 NC_009441.1 4330798 4331337 R hypothetical protein complement(4330798..4331337) Flavobacterium johnsoniae UW101 5092560 YP_001195970.1 CDS Fjoh_3637 NC_009441.1 4331376 4331699 R hypothetical protein complement(4331376..4331699) Flavobacterium johnsoniae UW101 5092561 YP_001195971.1 CDS Fjoh_3638 NC_009441.1 4331814 4332449 R hypothetical protein complement(4331814..4332449) Flavobacterium johnsoniae UW101 5092562 YP_001195972.1 CDS Fjoh_3639 NC_009441.1 4332456 4333184 R hypothetical protein complement(4332456..4333184) Flavobacterium johnsoniae UW101 5092563 YP_001195973.1 CDS Fjoh_3640 NC_009441.1 4333614 4334237 R hypothetical protein complement(4333614..4334237) Flavobacterium johnsoniae UW101 5092564 YP_001195974.1 CDS Fjoh_3641 NC_009441.1 4334278 4335153 R PFAM: phage integrase; phage integrase complement(4334278..4335153) Flavobacterium johnsoniae UW101 5092565 YP_001195975.1 CDS Fjoh_3642 NC_009441.1 4335165 4336082 R PFAM: phage integrase; phage integrase complement(4335165..4336082) Flavobacterium johnsoniae UW101 5092566 YP_001195976.1 CDS Fjoh_3643 NC_009441.1 4336257 4337927 R hypothetical protein complement(4336257..4337927) Flavobacterium johnsoniae UW101 5092567 YP_001195977.1 CDS Fjoh_3644 NC_009441.1 4337932 4338495 R hypothetical protein complement(4337932..4338495) Flavobacterium johnsoniae UW101 5092568 YP_001195978.1 CDS Fjoh_3645 NC_009441.1 4338861 4339190 R hypothetical protein complement(4338861..4339190) Flavobacterium johnsoniae UW101 5092569 YP_001195979.1 CDS Fjoh_3646 NC_009441.1 4339219 4339557 R hypothetical protein complement(4339219..4339557) Flavobacterium johnsoniae UW101 5092570 YP_001195980.1 CDS Fjoh_3647 NC_009441.1 4339569 4340426 R hypothetical protein complement(4339569..4340426) Flavobacterium johnsoniae UW101 5092571 YP_001195981.1 CDS Fjoh_3648 NC_009441.1 4340600 4341016 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 4340600..4341016 Flavobacterium johnsoniae UW101 5092572 YP_001195982.1 CDS Fjoh_3649 NC_009441.1 4341107 4341766 R hypothetical protein complement(4341107..4341766) Flavobacterium johnsoniae UW101 5092573 YP_001195983.1 CDS Fjoh_3650 NC_009441.1 4341797 4342108 R hypothetical protein complement(4341797..4342108) Flavobacterium johnsoniae UW101 5092574 YP_001195984.1 CDS Fjoh_3651 NC_009441.1 4342164 4342820 R hypothetical protein complement(4342164..4342820) Flavobacterium johnsoniae UW101 5092575 YP_001195985.1 CDS Fjoh_3652 NC_009441.1 4342850 4344070 R hypothetical protein complement(4342850..4344070) Flavobacterium johnsoniae UW101 5092576 YP_001195986.1 CDS Fjoh_3653 NC_009441.1 4344575 4344967 D hypothetical protein 4344575..4344967 Flavobacterium johnsoniae UW101 5092577 YP_001195987.1 CDS Fjoh_3654 NC_009441.1 4344952 4346196 D PFAM: Relaxase/mobilization nuclease; relaxase/mobilization nuclease 4344952..4346196 Flavobacterium johnsoniae UW101 5092578 YP_001195988.1 CDS Fjoh_3655 NC_009441.1 4346439 4348820 D ATP-dependent OLD family endonuclease 4346439..4348820 Flavobacterium johnsoniae UW101 5092579 YP_001195989.1 CDS Fjoh_3656 NC_009441.1 4348817 4350730 D superfamily I DNA/RNA helicase-like protein 4348817..4350730 Flavobacterium johnsoniae UW101 5092580 YP_001195990.1 CDS Fjoh_3657 NC_009441.1 4350887 4351408 D hypothetical protein 4350887..4351408 Flavobacterium johnsoniae UW101 5092819 YP_001195991.1 CDS Fjoh_3658 NC_009441.1 4351405 4352913 D hypothetical protein 4351405..4352913 Flavobacterium johnsoniae UW101 5092820 YP_001195992.1 CDS Fjoh_3659 NC_009441.1 4352891 4353265 D hypothetical protein 4352891..4353265 Flavobacterium johnsoniae UW101 5092821 YP_001195993.1 CDS Fjoh_3660 NC_009441.1 4353542 4354561 R hypothetical protein complement(4353542..4354561) Flavobacterium johnsoniae UW101 5092822 YP_001195994.1 CDS Fjoh_3661 NC_009441.1 4354709 4355473 R hypothetical protein complement(4354709..4355473) Flavobacterium johnsoniae UW101 5092823 YP_001195995.1 CDS Fjoh_3662 NC_009441.1 4356067 4356531 D PFAM: DNA repair protein RadC; DNA repair protein RadC 4356067..4356531 Flavobacterium johnsoniae UW101 5092824 YP_001195996.1 CDS Fjoh_3663 NC_009441.1 4357593 4358027 R hypothetical protein complement(4357593..4358027) Flavobacterium johnsoniae UW101 5092825 YP_001195997.1 CDS Fjoh_3664 NC_009441.1 4358036 4358944 R hypothetical protein complement(4358036..4358944) Flavobacterium johnsoniae UW101 5092826 YP_001195998.1 CDS Fjoh_3665 NC_009441.1 4359148 4360197 R hypothetical protein complement(4359148..4360197) Flavobacterium johnsoniae UW101 5092827 YP_001195999.1 CDS Fjoh_3666 NC_009441.1 4360588 4362147 R hypothetical protein complement(4360588..4362147) Flavobacterium johnsoniae UW101 5092828 YP_001196000.1 CDS Fjoh_3667 NC_009441.1 4362150 4363202 R PFAM: protein kinase; SMART: serine/threonine protein kinase; protein kinase complement(4362150..4363202) Flavobacterium johnsoniae UW101 5092829 YP_001196001.1 CDS Fjoh_3668 NC_009441.1 4363506 4363982 R hypothetical protein complement(4363506..4363982) Flavobacterium johnsoniae UW101 5092830 YP_001196002.1 CDS Fjoh_3669 NC_009441.1 4363982 4364494 R hypothetical protein complement(4363982..4364494) Flavobacterium johnsoniae UW101 5092831 YP_001196003.1 CDS Fjoh_3670 NC_009441.1 4364593 4365468 R PFAM: phage integrase; phage integrase complement(4364593..4365468) Flavobacterium johnsoniae UW101 5092832 YP_001196004.1 CDS Fjoh_3671 NC_009441.1 4365480 4366397 R PFAM: phage integrase; phage integrase complement(4365480..4366397) Flavobacterium johnsoniae UW101 5092833 YP_001196005.1 CDS Fjoh_3672 NC_009441.1 4366575 4368245 R hypothetical protein complement(4366575..4368245) Flavobacterium johnsoniae UW101 5092834 YP_001196006.1 CDS Fjoh_3673 NC_009441.1 4368250 4368813 R hypothetical protein complement(4368250..4368813) Flavobacterium johnsoniae UW101 5092835 YP_001196007.1 CDS Fjoh_3674 NC_009441.1 4369176 4369505 R hypothetical protein complement(4369176..4369505) Flavobacterium johnsoniae UW101 5092836 YP_001196008.1 CDS Fjoh_3675 NC_009441.1 4369535 4369864 R hypothetical protein complement(4369535..4369864) Flavobacterium johnsoniae UW101 5092837 YP_001196009.1 CDS Fjoh_3676 NC_009441.1 4369877 4370746 R hypothetical protein complement(4369877..4370746) Flavobacterium johnsoniae UW101 5092838 YP_001196010.1 CDS Fjoh_3677 NC_009441.1 4370908 4371324 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 4370908..4371324 Flavobacterium johnsoniae UW101 5092839 YP_001196011.1 CDS Fjoh_3678 NC_009441.1 4371399 4372058 R hypothetical protein complement(4371399..4372058) Flavobacterium johnsoniae UW101 5092840 YP_001196012.1 CDS Fjoh_3679 NC_009441.1 4372088 4372399 R hypothetical protein complement(4372088..4372399) Flavobacterium johnsoniae UW101 5092841 YP_001196013.1 CDS Fjoh_3680 NC_009441.1 4372449 4373105 R hypothetical protein complement(4372449..4373105) Flavobacterium johnsoniae UW101 5092842 YP_001196014.1 CDS Fjoh_3681 NC_009441.1 4373150 4373641 R hypothetical protein complement(4373150..4373641) Flavobacterium johnsoniae UW101 5092843 YP_001196015.1 CDS Fjoh_3682 NC_009441.1 4373638 4374504 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(4373638..4374504) Flavobacterium johnsoniae UW101 5092844 YP_001196016.1 CDS Fjoh_3683 NC_009441.1 4374572 4375312 R hypothetical protein complement(4374572..4375312) Flavobacterium johnsoniae UW101 5092845 YP_001196017.1 CDS Fjoh_3684 NC_009441.1 4375832 4376224 D PFAM: mobilisation protein; mobilisation protein 4375832..4376224 Flavobacterium johnsoniae UW101 5092846 YP_001196018.1 CDS Fjoh_3685 NC_009441.1 4376212 4377456 D PFAM: Relaxase/mobilization nuclease; relaxase/mobilization nuclease 4376212..4377456 Flavobacterium johnsoniae UW101 5092847 YP_001196019.1 CDS Fjoh_3686 NC_009441.1 4377531 4378226 R hypothetical protein complement(4377531..4378226) Flavobacterium johnsoniae UW101 5092848 YP_001196020.1 CDS Fjoh_3687 NC_009441.1 4378411 4380195 R PFAM: protein of unknown function DUF87; hypothetical protein complement(4378411..4380195) Flavobacterium johnsoniae UW101 5092849 YP_001196021.1 CDS Fjoh_3688 NC_009441.1 4380199 4381395 R hypothetical protein complement(4380199..4381395) Flavobacterium johnsoniae UW101 5092850 YP_001196022.1 CDS Fjoh_3689 NC_009441.1 4381473 4381931 R hypothetical protein complement(4381473..4381931) Flavobacterium johnsoniae UW101 5092851 YP_001196023.1 CDS Fjoh_3690 NC_009441.1 4382341 4383132 R hypothetical protein complement(4382341..4383132) Flavobacterium johnsoniae UW101 5092852 YP_001196024.1 CDS Fjoh_3691 NC_009441.1 4383609 4384388 R PFAM: NERD domain protein; DNA topoisomerase, type IA, zn finger domain protein; NERD domain-containing protein complement(4383609..4384388) Flavobacterium johnsoniae UW101 5092853 YP_001196025.1 CDS Fjoh_3692 NC_009441.1 4384962 4385525 D hypothetical protein 4384962..4385525 Flavobacterium johnsoniae UW101 5092854 YP_001196026.1 CDS Fjoh_3693 NC_009441.1 4386279 4386968 R PFAM: Insertion element protein; IS1 transposase; IS1 transposase complement(4386279..4386968) Flavobacterium johnsoniae UW101 5092855 YP_001196027.1 CDS Fjoh_3694 NC_009441.1 4387196 4387783 R hypothetical protein complement(4387196..4387783) Flavobacterium johnsoniae UW101 5092856 YP_001196028.1 CDS Fjoh_3695 NC_009441.1 4387909 4388457 R hypothetical protein complement(4387909..4388457) Flavobacterium johnsoniae UW101 5092857 YP_001196029.1 CDS Fjoh_3696 NC_009441.1 4388450 4389271 R hypothetical protein complement(4388450..4389271) Flavobacterium johnsoniae UW101 5092858 YP_001196030.1 CDS Fjoh_3697 NC_009441.1 4389856 4390227 D hypothetical protein 4389856..4390227 Flavobacterium johnsoniae UW101 5092859 YP_001196031.1 CDS Fjoh_3698 NC_009441.1 4390253 4390864 D hypothetical protein 4390253..4390864 Flavobacterium johnsoniae UW101 5092860 YP_001196032.1 CDS Fjoh_3699 NC_009441.1 4390931 4391797 R PFAM: phage integrase; phage integrase complement(4390931..4391797) Flavobacterium johnsoniae UW101 5092861 YP_001196033.1 CDS Fjoh_3700 NC_009441.1 4391810 4392727 R PFAM: phage integrase; phage integrase complement(4391810..4392727) Flavobacterium johnsoniae UW101 5092862 YP_001196034.1 CDS Fjoh_3701 NC_009441.1 4392839 4394518 R hypothetical protein complement(4392839..4394518) Flavobacterium johnsoniae UW101 5092863 YP_001196035.1 CDS Fjoh_3702 NC_009441.1 4394523 4395089 R hypothetical protein complement(4394523..4395089) Flavobacterium johnsoniae UW101 5092864 YP_001196036.1 CDS Fjoh_3703 NC_009441.1 4395567 4396091 R PFAM: phage integrase; phage integrase complement(4395567..4396091) Flavobacterium johnsoniae UW101 5092865 YP_001196037.1 CDS Fjoh_3704 NC_009441.1 4396500 4397150 R hypothetical protein complement(4396500..4397150) Flavobacterium johnsoniae UW101 5092866 YP_001196038.1 CDS Fjoh_3705 NC_009441.1 4397625 4398080 R hypothetical protein complement(4397625..4398080) Flavobacterium johnsoniae UW101 5092867 YP_001196039.1 CDS Fjoh_3706 NC_009441.1 4398049 4398861 R hypothetical protein complement(4398049..4398861) Flavobacterium johnsoniae UW101 5092868 YP_001196040.1 CDS Fjoh_3707 NC_009441.1 4399107 4399790 R hypothetical protein complement(4399107..4399790) Flavobacterium johnsoniae UW101 5092869 YP_001196041.1 CDS Fjoh_3708 NC_009441.1 4399792 4400886 R ATPase-like protein complement(4399792..4400886) Flavobacterium johnsoniae UW101 5092870 YP_001196042.1 CDS Fjoh_3709 NC_009441.1 4401086 4401955 R PFAM: phage integrase; phage integrase complement(4401086..4401955) Flavobacterium johnsoniae UW101 5092871 YP_001196043.1 CDS Fjoh_3710 NC_009441.1 4401966 4402883 R PFAM: phage integrase; phage integrase complement(4401966..4402883) Flavobacterium johnsoniae UW101 5092872 YP_001196044.1 CDS Fjoh_3711 NC_009441.1 4403046 4404716 R hypothetical protein complement(4403046..4404716) Flavobacterium johnsoniae UW101 5092873 YP_001196045.1 CDS Fjoh_3712 NC_009441.1 4404721 4405284 R hypothetical protein complement(4404721..4405284) Flavobacterium johnsoniae UW101 5092874 YP_001196046.1 CDS Fjoh_3713 NC_009441.1 4405743 4407038 R PFAM: Relaxase/mobilization nuclease; relaxase/mobilization nuclease complement(4405743..4407038) Flavobacterium johnsoniae UW101 5089748 YP_001196047.1 CDS Fjoh_3714 NC_009441.1 4407043 4407477 R hypothetical protein complement(4407043..4407477) Flavobacterium johnsoniae UW101 5089749 YP_001196048.1 CDS Fjoh_3715 NC_009441.1 4407687 4407977 D hypothetical protein 4407687..4407977 Flavobacterium johnsoniae UW101 5089750 YP_001196049.1 CDS Fjoh_3716 NC_009441.1 4407984 4408457 R hypothetical protein complement(4407984..4408457) Flavobacterium johnsoniae UW101 5089751 YP_001196050.1 CDS Fjoh_3717 NC_009441.1 4409489 4409860 R hypothetical protein complement(4409489..4409860) Flavobacterium johnsoniae UW101 5089752 YP_001196051.1 CDS Fjoh_3718 NC_009441.1 4409889 4410515 R hypothetical protein complement(4409889..4410515) Flavobacterium johnsoniae UW101 5089753 YP_001196052.1 CDS Fjoh_3719 NC_009441.1 4410535 4412259 R hypothetical protein complement(4410535..4412259) Flavobacterium johnsoniae UW101 5089754 YP_001196053.1 CDS Fjoh_3720 NC_009441.1 4412436 4412852 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 4412436..4412852 Flavobacterium johnsoniae UW101 5089755 YP_001196054.1 CDS Fjoh_3721 NC_009441.1 4412930 4413181 D hypothetical protein 4412930..4413181 Flavobacterium johnsoniae UW101 5089756 YP_001196055.1 CDS Fjoh_3722 NC_009441.1 4413399 4413569 D hypothetical protein 4413399..4413569 Flavobacterium johnsoniae UW101 5089757 YP_001196056.1 CDS Fjoh_3723 NC_009441.1 4413620 4413979 D hypothetical protein 4413620..4413979 Flavobacterium johnsoniae UW101 5089758 YP_001196057.1 CDS Fjoh_3724 NC_009441.1 4414153 4414632 D hypothetical protein 4414153..4414632 Flavobacterium johnsoniae UW101 5089759 YP_001196058.1 CDS Fjoh_3725 NC_009441.1 4414762 4415208 R hypothetical protein complement(4414762..4415208) Flavobacterium johnsoniae UW101 5089760 YP_001196059.1 CDS Fjoh_3726 NC_009441.1 4415336 4416106 R hypothetical protein complement(4415336..4416106) Flavobacterium johnsoniae UW101 5089761 YP_001196060.1 CDS Fjoh_3727 NC_009441.1 4416321 4417718 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase complement(4416321..4417718) Flavobacterium johnsoniae UW101 5089762 YP_001196061.1 CDS Fjoh_3728 NC_009441.1 4418184 4418906 R hypothetical protein complement(4418184..4418906) Flavobacterium johnsoniae UW101 5089763 YP_001196062.1 CDS Fjoh_3729 NC_009441.1 4418909 4424170 R PFAM: YD repeat-containing protein; YD repeat-/RHS repeat-containing protein complement(4418909..4424170) Flavobacterium johnsoniae UW101 5089764 YP_001196063.1 CDS Fjoh_3730 NC_009441.1 4424184 4427642 R TIGRFAM: YD repeat protein; YD repeat-containing protein complement(4424184..4427642) Flavobacterium johnsoniae UW101 5089765 YP_001196064.1 CDS Fjoh_3731 NC_009441.1 4427646 4429307 R hypothetical protein complement(4427646..4429307) Flavobacterium johnsoniae UW101 5089766 YP_001196065.1 CDS Fjoh_3733 NC_009441.1 4431005 4431646 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 4431005..4431646 Flavobacterium johnsoniae UW101 5092505 YP_001196066.1 CDS Fjoh_3734 NC_009441.1 4431715 4432167 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 4431715..4432167 Flavobacterium johnsoniae UW101 5089768 YP_001196067.1 CDS Fjoh_3735 NC_009441.1 4433177 4433689 R PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(4433177..4433689) Flavobacterium johnsoniae UW101 5089769 YP_001196068.1 CDS Fjoh_3736 NC_009441.1 4433761 4434678 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4433761..4434678) Flavobacterium johnsoniae UW101 5089770 YP_001196069.1 CDS Fjoh_3737 NC_009441.1 4434815 4435222 R PFAM: Cupin 2, conserved barrel domain protein; cupin 2 domain-containing protein complement(4434815..4435222) Flavobacterium johnsoniae UW101 5089771 YP_001196070.1 CDS Fjoh_3738 NC_009441.1 4435381 4436679 R PFAM: amidohydrolase; Amidohydrolase 3; amidohydrolase complement(4435381..4436679) Flavobacterium johnsoniae UW101 5089772 YP_001196071.1 CDS Fjoh_3739 NC_009441.1 4436778 4437734 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 4436778..4437734 Flavobacterium johnsoniae UW101 5089773 YP_001196072.1 CDS Fjoh_3740 NC_009441.1 4437864 4438364 R PFAM: response regulator receiver; response regulator receiver protein complement(4437864..4438364) Flavobacterium johnsoniae UW101 5089774 YP_001196073.1 CDS Fjoh_3741 NC_009441.1 4438557 4439969 R PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; Male sterility C-terminal domain; hypothetical protein complement(4438557..4439969) Flavobacterium johnsoniae UW101 5089775 YP_001196074.1 CDS Fjoh_3742 NC_009441.1 4439982 4440665 R PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4439982..4440665) Flavobacterium johnsoniae UW101 5089776 YP_001196075.1 CDS Fjoh_3743 NC_009441.1 4440912 4441205 D hypothetical protein 4440912..4441205 Flavobacterium johnsoniae UW101 5089777 YP_001196076.1 CDS Fjoh_3744 NC_009441.1 4441316 4442824 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 4441316..4442824 Flavobacterium johnsoniae UW101 5089778 YP_001196077.1 CDS Fjoh_3745 NC_009441.1 4443063 4443974 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(4443063..4443974) Flavobacterium johnsoniae UW101 5089779 YP_001196078.1 CDS Fjoh_3746 NC_009441.1 4444069 4444503 R PFAM: protein of unknown function DUF1486; hypothetical protein complement(4444069..4444503) Flavobacterium johnsoniae UW101 5089780 YP_001196079.1 CDS Fjoh_3747 NC_009441.1 4444571 4445335 R PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4444571..4445335) Flavobacterium johnsoniae UW101 5089781 YP_001196080.1 CDS Fjoh_3748 NC_009441.1 4445693 4446688 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4445693..4446688 Flavobacterium johnsoniae UW101 5089782 YP_001196081.1 CDS Fjoh_3749 NC_009441.1 4446719 4447537 D SMART: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 4446719..4447537 Flavobacterium johnsoniae UW101 5089783 YP_001196082.1 CDS Fjoh_3750 NC_009441.1 4448031 4448582 D hypothetical protein 4448031..4448582 Flavobacterium johnsoniae UW101 5089784 YP_001196083.1 CDS Fjoh_3751 NC_009441.1 4448878 4449330 R PFAM: heat shock protein Hsp20; response regulator receiver protein complement(4448878..4449330) Flavobacterium johnsoniae UW101 5089785 YP_001196084.1 CDS Fjoh_3752 NC_009441.1 4450052 4451356 R PFAM: glutamyl-tRNA reductase; Shikimate/quinate 5-dehydrogenase; glutamyl-tRNA reductase complement(4450052..4451356) Flavobacterium johnsoniae UW101 5089786 YP_001196085.1 CDS Fjoh_3753 NC_009441.1 4451578 4452168 R hypothetical protein complement(4451578..4452168) Flavobacterium johnsoniae UW101 5089787 YP_001196086.1 CDS Fjoh_3754 NC_009441.1 4452189 4452623 R hypothetical protein complement(4452189..4452623) Flavobacterium johnsoniae UW101 5089788 YP_001196087.1 CDS Fjoh_3757 NC_009441.1 4453306 4453740 D hypothetical protein 4453306..4453740 Flavobacterium johnsoniae UW101 5092507 YP_001196088.1 CDS Fjoh_3758 NC_009441.1 4453724 4454674 D PFAM: ApbE family lipoprotein; ApbE family lipoprotein 4453724..4454674 Flavobacterium johnsoniae UW101 5089790 YP_001196089.1 CDS Fjoh_3759 NC_009441.1 4454917 4456101 D hypothetical protein 4454917..4456101 Flavobacterium johnsoniae UW101 5089791 YP_001196090.1 CDS Fjoh_3760 NC_009441.1 4456740 4458716 R Type IV secretory pathway VirD4 components-like protein complement(4456740..4458716) Flavobacterium johnsoniae UW101 5089792 YP_001196091.1 CDS Fjoh_3761 NC_009441.1 4458749 4460014 R PFAM: Relaxase/mobilization nuclease; relaxase/mobilization nuclease complement(4458749..4460014) Flavobacterium johnsoniae UW101 5089793 YP_001196092.1 CDS Fjoh_3762 NC_009441.1 4460002 4460391 R hypothetical protein complement(4460002..4460391) Flavobacterium johnsoniae UW101 5089794 YP_001196093.1 CDS Fjoh_3763 NC_009441.1 4460701 4461000 D hypothetical protein 4460701..4461000 Flavobacterium johnsoniae UW101 5089795 YP_001196094.1 CDS Fjoh_3764 NC_009441.1 4461130 4462311 D PFAM: KWG Leptospira repeat protein; hypothetical protein 4461130..4462311 Flavobacterium johnsoniae UW101 5089796 YP_001196095.1 CDS Fjoh_3765 NC_009441.1 4462632 4463099 R PFAM: DNA repair protein RadC; DNA repair protein RadC complement(4462632..4463099) Flavobacterium johnsoniae UW101 5089797 YP_001196096.1 CDS Fjoh_3766 NC_009441.1 4463484 4463804 D hypothetical protein 4463484..4463804 Flavobacterium johnsoniae UW101 5089798 YP_001196097.1 CDS Fjoh_3767 NC_009441.1 4463867 4464316 R PFAM: response regulator receiver; response regulator receiver protein complement(4463867..4464316) Flavobacterium johnsoniae UW101 5089799 YP_001196098.1 CDS Fjoh_3768 NC_009441.1 4464745 4465929 D PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase 4464745..4465929 Flavobacterium johnsoniae UW101 5089800 YP_001196099.1 CDS Fjoh_3769 NC_009441.1 4465930 4468986 D TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 4465930..4468986 Flavobacterium johnsoniae UW101 5089801 YP_001196100.1 CDS Fjoh_3770 NC_009441.1 4469016 4469636 D alkylated DNA repair protein-like protein 4469016..4469636 Flavobacterium johnsoniae UW101 5089802 YP_001196101.1 CDS Fjoh_3771 NC_009441.1 4469824 4470141 D hypothetical protein 4469824..4470141 Flavobacterium johnsoniae UW101 5089580 YP_001196102.1 CDS Fjoh_3772 NC_009441.1 4470291 4470539 D hypothetical protein 4470291..4470539 Flavobacterium johnsoniae UW101 5089581 YP_001196103.1 CDS Fjoh_3773 NC_009441.1 4470831 4473194 D PFAM: UvrD/REP helicase; UvrD/REP helicase 4470831..4473194 Flavobacterium johnsoniae UW101 5089582 YP_001196104.1 CDS Fjoh_3774 NC_009441.1 4473392 4473538 R hypothetical protein complement(4473392..4473538) Flavobacterium johnsoniae UW101 5089583 YP_001196105.1 CDS Fjoh_3775 NC_009441.1 4473576 4475012 R PFAM: Exonuclease VII, large subunit; exodeoxyribonuclease VII complement(4473576..4475012) Flavobacterium johnsoniae UW101 5089584 YP_001196106.1 CDS Fjoh_3776 NC_009441.1 4475378 4475905 D hypothetical protein 4475378..4475905 Flavobacterium johnsoniae UW101 5089585 YP_001196107.1 CDS Fjoh_3777 NC_009441.1 4475922 4479413 D hypothetical protein 4475922..4479413 Flavobacterium johnsoniae UW101 5089586 YP_001196108.1 CDS Fjoh_3778 NC_009441.1 4479793 4480953 D PFAM: Integrase, catalytic region; transposase IS3/IS911 family protein; integrase catalytic subunit 4479793..4480953 Flavobacterium johnsoniae UW101 5089587 YP_001196109.1 CDS Fjoh_3779 NC_009441.1 4481018 4481596 D PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 4481018..4481596 Flavobacterium johnsoniae UW101 5089588 YP_001196110.1 CDS Fjoh_3780 NC_009441.1 4481780 4482025 R hypothetical protein complement(4481780..4482025) Flavobacterium johnsoniae UW101 5089589 YP_001196111.1 CDS Fjoh_3781 NC_009441.1 4482614 4484803 D hypothetical protein 4482614..4484803 Flavobacterium johnsoniae UW101 5089590 YP_001196112.1 CDS Fjoh_3782 NC_009441.1 4484831 4485640 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4484831..4485640 Flavobacterium johnsoniae UW101 5089591 YP_001196113.1 CDS Fjoh_3783 NC_009441.1 4485721 4486209 D hypothetical protein 4485721..4486209 Flavobacterium johnsoniae UW101 5089592 YP_001196114.1 CDS Fjoh_3784 NC_009441.1 4486448 4486672 D hypothetical protein 4486448..4486672 Flavobacterium johnsoniae UW101 5089593 YP_001196115.1 CDS Fjoh_3785 NC_009441.1 4486701 4487372 D PFAM: cyclase/dehydrase; cyclase/dehydrase 4486701..4487372 Flavobacterium johnsoniae UW101 5089594 YP_001196116.1 CDS Fjoh_3786 NC_009441.1 4487574 4488476 D PFAM: Mg2+ transporter protein, CorA family protein; CorA family Mg2+ transporter protein 4487574..4488476 Flavobacterium johnsoniae UW101 5089595 YP_001196117.1 CDS Fjoh_3787 NC_009441.1 4488477 4488854 R PFAM: response regulator receiver; response regulator receiver protein complement(4488477..4488854) Flavobacterium johnsoniae UW101 5089596 YP_001196118.1 CDS Fjoh_3788 NC_009441.1 4489392 4489850 D PFAM: response regulator receiver; response regulator receiver protein 4489392..4489850 Flavobacterium johnsoniae UW101 5089597 YP_001196119.1 CDS Fjoh_3789 NC_009441.1 4489859 4492345 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(4489859..4492345) Flavobacterium johnsoniae UW101 5089598 YP_001196120.1 CDS Fjoh_3790 NC_009441.1 4493932 4494546 D CRP/FNR family transcriptional regulator 4493932..4494546 Flavobacterium johnsoniae UW101 5089599 YP_001196121.1 CDS Fjoh_3791 NC_009441.1 4494634 4495422 D PFAM: esterase; esterase 4494634..4495422 Flavobacterium johnsoniae UW101 5089600 YP_001196122.1 CDS Fjoh_3792 NC_009441.1 4495406 4495987 D hypothetical protein 4495406..4495987 Flavobacterium johnsoniae UW101 5089601 YP_001196123.1 CDS Fjoh_3793 NC_009441.1 4496368 4497549 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(4496368..4497549) Flavobacterium johnsoniae UW101 5089602 YP_001196124.1 CDS Fjoh_3794 NC_009441.1 4498535 4499323 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4498535..4499323 Flavobacterium johnsoniae UW101 5089603 YP_001196125.1 CDS Fjoh_3795 NC_009441.1 4499556 4500362 D PFAM: Phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 4499556..4500362 Flavobacterium johnsoniae UW101 5089604 YP_001196126.1 CDS Fjoh_3796 NC_009441.1 4500517 4501203 D hypothetical protein 4500517..4501203 Flavobacterium johnsoniae UW101 5089605 YP_001196127.1 CDS Fjoh_3797 NC_009441.1 4501205 4501630 D hypothetical protein 4501205..4501630 Flavobacterium johnsoniae UW101 5089606 YP_001196128.1 CDS Fjoh_3798 NC_009441.1 4501654 4502229 D hypothetical protein 4501654..4502229 Flavobacterium johnsoniae UW101 5089607 YP_001196129.1 CDS Fjoh_3799 NC_009441.1 4502483 4503004 R hypothetical protein complement(4502483..4503004) Flavobacterium johnsoniae UW101 5089608 YP_001196130.1 CDS Fjoh_3800 NC_009441.1 4503001 4505439 R hypothetical protein complement(4503001..4505439) Flavobacterium johnsoniae UW101 5089609 YP_001196131.1 CDS Fjoh_3801 NC_009441.1 4505445 4506869 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(4505445..4506869) Flavobacterium johnsoniae UW101 5089610 YP_001196132.1 CDS Fjoh_3802 NC_009441.1 4506873 4510508 R PFAM: TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(4506873..4510508) Flavobacterium johnsoniae UW101 5089611 YP_001196133.1 CDS Fjoh_3803 NC_009441.1 4510643 4511779 R PFAM: FecR protein; FecR anti-FecI sigma factor complement(4510643..4511779) Flavobacterium johnsoniae UW101 5089612 YP_001196134.1 CDS Fjoh_3804 NC_009441.1 4511981 4512550 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(4511981..4512550) Flavobacterium johnsoniae UW101 5089613 YP_001196135.1 CDS Fjoh_3805 NC_009441.1 4512779 4514626 D hypothetical protein 4512779..4514626 Flavobacterium johnsoniae UW101 5089614 YP_001196136.1 CDS Fjoh_3806 NC_009441.1 4514967 4516094 D PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase 4514967..4516094 Flavobacterium johnsoniae UW101 5089615 YP_001196137.1 CDS Fjoh_3807 NC_009441.1 4516095 4516808 D PFAM: Methyltransferase type 12; type 12 methyltransferase 4516095..4516808 Flavobacterium johnsoniae UW101 5089616 YP_001196138.1 CDS Fjoh_3808 NC_009441.1 4516805 4517857 D PFAM: chalcone and stilbene synthase domain protein; FAE1/Type III polyketide synthase-like protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-oxoacyl-ACP synthase 4516805..4517857 Flavobacterium johnsoniae UW101 5089617 YP_001196139.1 CDS Fjoh_3809 NC_009441.1 4517872 4518309 D PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 4517872..4518309 Flavobacterium johnsoniae UW101 5089618 YP_001196140.1 CDS Fjoh_3810 NC_009441.1 4518306 4519580 D PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase 4518306..4519580 Flavobacterium johnsoniae UW101 5089619 YP_001196141.1 CDS Fjoh_3811 NC_009441.1 4519585 4519839 D hypothetical protein 4519585..4519839 Flavobacterium johnsoniae UW101 5089620 YP_001196142.1 CDS Fjoh_3812 NC_009441.1 4519836 4520339 D hypothetical protein 4519836..4520339 Flavobacterium johnsoniae UW101 5089621 YP_001196143.1 CDS Fjoh_3813 NC_009441.1 4520530 4521510 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; SMP-30/gluconolaconase/LRE domain-containing protein complement(4520530..4521510) Flavobacterium johnsoniae UW101 5089622 YP_001196144.1 CDS Fjoh_3814 NC_009441.1 4521610 4522197 R PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(4521610..4522197) Flavobacterium johnsoniae UW101 5089623 YP_001196145.1 CDS Fjoh_3815 NC_009441.1 4522360 4522806 R hypothetical protein complement(4522360..4522806) Flavobacterium johnsoniae UW101 5089624 YP_001196146.1 CDS Fjoh_3816 NC_009441.1 4522923 4523285 D PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 4522923..4523285 Flavobacterium johnsoniae UW101 5089625 YP_001196147.1 CDS Fjoh_3817 NC_009441.1 4523731 4524825 D PFAM: beta-lactamase; beta-lactamase 4523731..4524825 Flavobacterium johnsoniae UW101 5089626 YP_001196148.1 CDS Fjoh_3818 NC_009441.1 4524974 4525804 R hypothetical protein complement(4524974..4525804) Flavobacterium johnsoniae UW101 5089627 YP_001196149.1 CDS Fjoh_3819 NC_009441.1 4526558 4527022 D PFAM: response regulator receiver; response regulator receiver protein 4526558..4527022 Flavobacterium johnsoniae UW101 5089628 YP_001196150.1 CDS Fjoh_3820 NC_009441.1 4527070 4529337 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Phytochrome, central region domain protein; PAS fold-2 domain protein; multi-sensor signal transduction histidine kinase complement(4527070..4529337) Flavobacterium johnsoniae UW101 5089629 YP_001196151.1 CDS Fjoh_3821 NC_009441.1 4529457 4529912 R PFAM: response regulator receiver; response regulator receiver protein complement(4529457..4529912) Flavobacterium johnsoniae UW101 5089630 YP_001196152.1 CDS Fjoh_3822 NC_009441.1 4530685 4531167 D PFAM: response regulator receiver; response regulator receiver protein 4530685..4531167 Flavobacterium johnsoniae UW101 5089631 YP_001196153.1 CDS Fjoh_3823 NC_009441.1 4531186 4532682 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4531186..4532682 Flavobacterium johnsoniae UW101 5089632 YP_001196154.1 CDS Fjoh_3824 NC_009441.1 4532782 4533306 R hypothetical protein complement(4532782..4533306) Flavobacterium johnsoniae UW101 5089633 YP_001196155.1 CDS Fjoh_3825 NC_009441.1 4533633 4534016 R PFAM: response regulator receiver; response regulator receiver protein complement(4533633..4534016) Flavobacterium johnsoniae UW101 5089634 YP_001196156.1 CDS Fjoh_3826 NC_009441.1 4534377 4535081 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase 4534377..4535081 Flavobacterium johnsoniae UW101 5089635 YP_001196157.1 CDS Fjoh_3827 NC_009441.1 4535309 4535875 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 4535309..4535875 Flavobacterium johnsoniae UW101 5093738 YP_001196158.1 CDS Fjoh_3828 NC_009441.1 4535953 4536693 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4535953..4536693 Flavobacterium johnsoniae UW101 5093739 YP_001196159.1 CDS Fjoh_3829 NC_009441.1 4536900 4537184 D hypothetical protein 4536900..4537184 Flavobacterium johnsoniae UW101 5093740 YP_001196160.1 CDS Fjoh_3830 NC_009441.1 4537289 4539409 R PFAM: sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(4537289..4539409) Flavobacterium johnsoniae UW101 5093741 YP_001196161.1 CDS Fjoh_3831 NC_009441.1 4539413 4539988 R hypothetical protein complement(4539413..4539988) Flavobacterium johnsoniae UW101 5093742 YP_001196162.1 CDS Fjoh_3832 NC_009441.1 4540249 4540557 D hypothetical protein 4540249..4540557 Flavobacterium johnsoniae UW101 5093743 YP_001196163.1 CDS Fjoh_3833 NC_009441.1 4540691 4541878 R PFAM: protein of unknown function DUF323; hypothetical protein complement(4540691..4541878) Flavobacterium johnsoniae UW101 5093744 YP_001196164.1 CDS Fjoh_3834 NC_009441.1 4541891 4542883 R hypothetical protein complement(4541891..4542883) Flavobacterium johnsoniae UW101 5093745 YP_001196165.1 CDS Fjoh_3835 NC_009441.1 4543366 4545087 D PFAM: amine oxidase; amine oxidase 4543366..4545087 Flavobacterium johnsoniae UW101 5093746 YP_001196166.1 CDS Fjoh_3836 NC_009441.1 4545089 4546849 D PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; thiamine pyrophosphate binding domain-containing protein 4545089..4546849 Flavobacterium johnsoniae UW101 5093747 YP_001196167.1 CDS Fjoh_3837 NC_009441.1 4547105 4547557 R PFAM: regulatory protein, AsnC/Lrp family; regulatory protein, ArsR; AsnC family transcriptional regulator complement(4547105..4547557) Flavobacterium johnsoniae UW101 5093748 YP_001196168.1 CDS Fjoh_3838 NC_009441.1 4547775 4548713 D Na+-dependent transporter-like protein 4547775..4548713 Flavobacterium johnsoniae UW101 5093749 YP_001196169.1 CDS Fjoh_3839 NC_009441.1 4548807 4549838 R catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(4548807..4549838) Flavobacterium johnsoniae UW101 5093750 YP_001196170.1 CDS Fjoh_3840 NC_009441.1 4549872 4550924 R hypothetical protein complement(4549872..4550924) Flavobacterium johnsoniae UW101 5093751 YP_001196171.1 CDS Fjoh_3841 NC_009441.1 4551357 4554674 D hypothetical protein 4551357..4554674 Flavobacterium johnsoniae UW101 5093752 YP_001196172.1 CDS Fjoh_3842 NC_009441.1 4554824 4556086 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 4554824..4556086 Flavobacterium johnsoniae UW101 5093753 YP_001196173.1 CDS Fjoh_3843 NC_009441.1 4556222 4558012 R PFAM: peptidase S41; peptidase S41 complement(4556222..4558012) Flavobacterium johnsoniae UW101 5093754 YP_001196174.1 CDS Fjoh_3844 NC_009441.1 4558091 4558864 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(4558091..4558864) Flavobacterium johnsoniae UW101 5093755 YP_001196175.1 CDS Fjoh_3845 NC_009441.1 4559553 4560056 D TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit 4559553..4560056 Flavobacterium johnsoniae UW101 5093756 YP_001196176.1 CDS Fjoh_3846 NC_009441.1 4560157 4560504 R PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator complement(4560157..4560504) Flavobacterium johnsoniae UW101 5093757 YP_001196177.1 CDS Fjoh_3847 NC_009441.1 4560611 4561354 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 4560611..4561354 Flavobacterium johnsoniae UW101 5093758 YP_001196178.1 CDS Fjoh_3848 NC_009441.1 4561459 4561824 R PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator complement(4561459..4561824) Flavobacterium johnsoniae UW101 5093759 YP_001196179.1 CDS Fjoh_3849 NC_009441.1 4561960 4562742 D PFAM: short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 4561960..4562742 Flavobacterium johnsoniae UW101 5093760 YP_001196180.1 CDS Fjoh_3850 NC_009441.1 4562765 4563088 D hypothetical protein 4562765..4563088 Flavobacterium johnsoniae UW101 5093761 YP_001196181.1 CDS Fjoh_3851 NC_009441.1 4563165 4565186 R PFAM: Polyphosphate kinase; polyphosphate kinase complement(4563165..4565186) Flavobacterium johnsoniae UW101 5093762 YP_001196182.1 CDS Fjoh_3852 NC_009441.1 4565347 4565616 R hypothetical protein complement(4565347..4565616) Flavobacterium johnsoniae UW101 5093763 YP_001196183.1 CDS Fjoh_3853 NC_009441.1 4565642 4566994 R PFAM: peptidase S41; peptidase S41 complement(4565642..4566994) Flavobacterium johnsoniae UW101 5093764 YP_001196184.1 CDS Fjoh_3854 NC_009441.1 4567037 4567843 R hypothetical protein complement(4567037..4567843) Flavobacterium johnsoniae UW101 5093765 YP_001196185.1 CDS Fjoh_3855 NC_009441.1 4567864 4568718 R hypothetical protein complement(4567864..4568718) Flavobacterium johnsoniae UW101 5093766 YP_001196186.1 CDS Fjoh_3856 NC_009441.1 4568791 4570089 R hypothetical protein complement(4568791..4570089) Flavobacterium johnsoniae UW101 5093767 YP_001196187.1 CDS Fjoh_3857 NC_009441.1 4570513 4573746 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(4570513..4573746) Flavobacterium johnsoniae UW101 5093768 YP_001196188.1 CDS Fjoh_3858 NC_009441.1 4573897 4574745 R PFAM: FecR protein; FecR anti-FecI sigma factor complement(4573897..4574745) Flavobacterium johnsoniae UW101 5093769 YP_001196189.1 CDS Fjoh_3859 NC_009441.1 4574938 4575516 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(4574938..4575516) Flavobacterium johnsoniae UW101 5093770 YP_001196190.1 CDS Fjoh_3860 NC_009441.1 4575835 4576911 D PFAM: sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region 4575835..4576911 Flavobacterium johnsoniae UW101 5093771 YP_001196191.1 CDS Fjoh_3861 NC_009441.1 4577233 4579512 D PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 protein 4577233..4579512 Flavobacterium johnsoniae UW101 5093772 YP_001196192.1 CDS Fjoh_3862 NC_009441.1 4579875 4584029 D PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase 4579875..4584029 Flavobacterium johnsoniae UW101 5093773 YP_001196193.1 CDS Fjoh_3863 NC_009441.1 4584470 4587574 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 4584470..4587574 Flavobacterium johnsoniae UW101 5093774 YP_001196194.1 CDS Fjoh_3864 NC_009441.1 4587633 4589156 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 4587633..4589156 Flavobacterium johnsoniae UW101 5093775 YP_001196195.1 CDS Fjoh_3865 NC_009441.1 4589165 4590268 D hypothetical protein 4589165..4590268 Flavobacterium johnsoniae UW101 5093776 YP_001196196.1 CDS Fjoh_3866 NC_009441.1 4590617 4592008 D PFAM: glycoside hydrolase, family 10; Fibronectin, type III domain protein; endo-1,4-beta-xylanase 4590617..4592008 Flavobacterium johnsoniae UW101 5093777 YP_001196197.1 CDS Fjoh_3867 NC_009441.1 4592202 4593116 R PFAM: glycoside hydrolase, family 16; glycoside hydrolase complement(4592202..4593116) Flavobacterium johnsoniae UW101 5093778 YP_001196198.1 CDS Fjoh_3868 NC_009441.1 4593347 4594639 R PFAM: glycoside hydrolase, family 8; glycoside hydrolase complement(4593347..4594639) Flavobacterium johnsoniae UW101 5093779 YP_001196199.1 CDS Fjoh_3869 NC_009441.1 4595424 4596884 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; sugar (glycoside-Pentoside-hexuronide) transporter 4595424..4596884 Flavobacterium johnsoniae UW101 5093780 YP_001196200.1 CDS Fjoh_3870 NC_009441.1 4597112 4598608 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(4597112..4598608) Flavobacterium johnsoniae UW101 5093781 YP_001196201.1 CDS Fjoh_3871 NC_009441.1 4598617 4601625 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(4598617..4601625) Flavobacterium johnsoniae UW101 5093782 YP_001196202.1 CDS Fjoh_3872 NC_009441.1 4602177 4606298 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase complement(4602177..4606298) Flavobacterium johnsoniae UW101 5093783 YP_001196203.1 CDS Fjoh_3873 NC_009441.1 4606393 4608336 R hypothetical protein complement(4606393..4608336) Flavobacterium johnsoniae UW101 5093784 YP_001196204.1 CDS Fjoh_3874 NC_009441.1 4608397 4610991 R PFAM: glycoside hydrolase, family 3 domain protein; beta-glucosidase complement(4608397..4610991) Flavobacterium johnsoniae UW101 5093785 YP_001196205.1 CDS Fjoh_3875 NC_009441.1 4611034 4612590 R PFAM: glycoside hydrolase, family 43; glycoside hydrolase complement(4611034..4612590) Flavobacterium johnsoniae UW101 5093786 YP_001196206.1 CDS Fjoh_3876 NC_009441.1 4612623 4614920 R PFAM: protein of unknown function DUF1680; hypothetical protein complement(4612623..4614920) Flavobacterium johnsoniae UW101 5093787 YP_001196207.1 CDS Fjoh_3877 NC_009441.1 4614939 4617464 R hypothetical protein complement(4614939..4617464) Flavobacterium johnsoniae UW101 5093788 YP_001196208.1 CDS Fjoh_3878 NC_009441.1 4617487 4619169 R PFAM: esterase; protein of unknown function DUF303, acetylesterase; esterase complement(4617487..4619169) Flavobacterium johnsoniae UW101 5093789 YP_001196209.1 CDS Fjoh_3879 NC_009441.1 4619221 4620465 R PFAM: lipolytic enzyme, G-D-S-L family; GDSL family lipase complement(4619221..4620465) Flavobacterium johnsoniae UW101 5093790 YP_001196210.1 CDS Fjoh_3880 NC_009441.1 4620521 4622236 R PFAM: glycoside hydrolase, family 43; glycoside hydrolase complement(4620521..4622236) Flavobacterium johnsoniae UW101 5093791 YP_001196211.1 CDS Fjoh_3881 NC_009441.1 4622382 4624322 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(4622382..4624322) Flavobacterium johnsoniae UW101 5093792 YP_001196212.1 CDS Fjoh_3882 NC_009441.1 4624335 4627427 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(4624335..4627427) Flavobacterium johnsoniae UW101 5093793 YP_001196213.1 CDS Fjoh_3883 NC_009441.1 4628317 4630944 D PFAM: glycoside hydrolase, family 3 domain protein; PA14 domain protein; SMART: PA14-related domain protein; glycoside hydrolase family 3 protein 4628317..4630944 Flavobacterium johnsoniae UW101 5090114 YP_001196214.1 CDS Fjoh_3884 NC_009441.1 4631040 4631444 R PFAM: response regulator receiver; response regulator receiver protein complement(4631040..4631444) Flavobacterium johnsoniae UW101 5090115 YP_001196215.1 CDS Fjoh_3885 NC_009441.1 4631973 4632347 R hypothetical protein complement(4631973..4632347) Flavobacterium johnsoniae UW101 5090116 YP_001196216.1 CDS Fjoh_3886 NC_009441.1 4632393 4632905 R hypothetical protein complement(4632393..4632905) Flavobacterium johnsoniae UW101 5090117 YP_001196217.1 CDS Fjoh_3887 NC_009441.1 4633543 4634523 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4633543..4634523 Flavobacterium johnsoniae UW101 5090118 YP_001196218.1 CDS Fjoh_3888 NC_009441.1 4634543 4635181 R hypothetical protein complement(4634543..4635181) Flavobacterium johnsoniae UW101 5090119 YP_001196219.1 CDS Fjoh_3889 NC_009441.1 4635395 4636519 R PFAM: LytTr DNA-binding region; response regulator receiver protein complement(4635395..4636519) Flavobacterium johnsoniae UW101 5090120 YP_001196220.1 CDS Fjoh_3890 NC_009441.1 4636710 4637690 D hypothetical protein 4636710..4637690 Flavobacterium johnsoniae UW101 5090121 YP_001196221.1 CDS Fjoh_3891 NC_009441.1 4637693 4638160 D hypothetical protein 4637693..4638160 Flavobacterium johnsoniae UW101 5090122 YP_001196222.1 CDS Fjoh_3892 NC_009441.1 4638298 4639293 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4638298..4639293 Flavobacterium johnsoniae UW101 5090123 YP_001196223.1 CDS Fjoh_3893 NC_009441.1 4639323 4640141 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 4639323..4640141 Flavobacterium johnsoniae UW101 5090124 YP_001196224.1 CDS Fjoh_3894 NC_009441.1 4640199 4640696 R hypothetical protein complement(4640199..4640696) Flavobacterium johnsoniae UW101 5090125 YP_001196225.1 CDS Fjoh_3895 NC_009441.1 4640831 4641679 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(4640831..4641679) Flavobacterium johnsoniae UW101 5090126 YP_001196226.1 CDS Fjoh_3896 NC_009441.1 4641739 4642197 R PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(4641739..4642197) Flavobacterium johnsoniae UW101 5090127 YP_001196227.1 CDS Fjoh_3897 NC_009441.1 4642311 4644584 R TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI complement(4642311..4644584) Flavobacterium johnsoniae UW101 5090128 YP_001196228.1 CDS Fjoh_3898 NC_009441.1 4644845 4645813 R hypothetical protein complement(4644845..4645813) Flavobacterium johnsoniae UW101 5090129 YP_001196229.1 CDS Fjoh_3899 NC_009441.1 4645984 4646346 R hypothetical protein complement(4645984..4646346) Flavobacterium johnsoniae UW101 5090130 YP_001196230.1 CDS Fjoh_3900 NC_009441.1 4646643 4646855 D hypothetical protein 4646643..4646855 Flavobacterium johnsoniae UW101 5090131 YP_001196231.1 CDS Fjoh_3901 NC_009441.1 4646938 4649142 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(4646938..4649142) Flavobacterium johnsoniae UW101 5090132 YP_001196232.1 CDS Fjoh_3902 NC_009441.1 4649230 4650240 R TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; hydrogenase expression/formation protein HypE complement(4649230..4650240) Flavobacterium johnsoniae UW101 5090133 YP_001196233.1 CDS Fjoh_3903 NC_009441.1 4650251 4650487 R TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF complement(4650251..4650487) Flavobacterium johnsoniae UW101 5090134 YP_001196234.1 CDS Fjoh_3904 NC_009441.1 4650490 4651344 R TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; hydrogenase nickel incorporation protein HypB complement(4650490..4651344) Flavobacterium johnsoniae UW101 5090135 YP_001196235.1 CDS Fjoh_3905 NC_009441.1 4651353 4651694 R PFAM: hydrogenase expression/synthesis, HypA; hydrogenase expression/synthesis, HypA complement(4651353..4651694) Flavobacterium johnsoniae UW101 5090136 YP_001196236.1 CDS Fjoh_3906 NC_009441.1 4651881 4653008 D TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 4651881..4653008 Flavobacterium johnsoniae UW101 5090137 YP_001196237.1 CDS Fjoh_3907 NC_009441.1 4653025 4654761 D PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 4653025..4654761 Flavobacterium johnsoniae UW101 5090138 YP_001196238.1 CDS Fjoh_3908 NC_009441.1 4654777 4655538 D TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; Ni/Fe-hydrogenase, b-type cytochrome subunit 4654777..4655538 Flavobacterium johnsoniae UW101 5090139 YP_001196239.1 CDS Fjoh_3909 NC_009441.1 4655546 4656052 D TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 4655546..4656052 Flavobacterium johnsoniae UW101 5090140 YP_001196240.1 CDS Fjoh_3910 NC_009441.1 4656065 4658335 D TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; (NiFe) hydrogenase maturation protein HypF 4656065..4658335 Flavobacterium johnsoniae UW101 5090141 YP_001196241.1 CDS Fjoh_3911 NC_009441.1 4658339 4658965 D PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidyl-prolyl cis-trans isomerase 4658339..4658965 Flavobacterium johnsoniae UW101 5090142 YP_001196242.1 CDS Fjoh_3912 NC_009441.1 4658967 4660043 D TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 4658967..4660043 Flavobacterium johnsoniae UW101 5090143 YP_001196243.1 CDS Fjoh_3913 NC_009441.1 4660052 4660768 D PFAM: high-affinity nickel-transporter; high-affinity nickel-transporter 4660052..4660768 Flavobacterium johnsoniae UW101 5090144 YP_001196244.1 CDS Fjoh_3915 NC_009441.1 4661447 4662571 D hypothetical protein 4661447..4662571 Flavobacterium johnsoniae UW101 5092508 YP_001196245.1 CDS Fjoh_3916 NC_009441.1 4662631 4663053 R PFAM: MgtC/SapB transporter; MgtC/SapB transporter complement(4662631..4663053) Flavobacterium johnsoniae UW101 5090146 YP_001196246.1 CDS Fjoh_3917 NC_009441.1 4663186 4663965 R PFAM: polysaccharide deacetylase; polysaccharide deacetylase complement(4663186..4663965) Flavobacterium johnsoniae UW101 5090147 YP_001196247.1 CDS Fjoh_3918 NC_009441.1 4664153 4664845 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 4664153..4664845 Flavobacterium johnsoniae UW101 5090148 YP_001196248.1 CDS Fjoh_3919 NC_009441.1 4664835 4666202 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 4664835..4666202 Flavobacterium johnsoniae UW101 5090149 YP_001196249.1 CDS Fjoh_3920 NC_009441.1 4666832 4670047 D hypothetical protein 4666832..4670047 Flavobacterium johnsoniae UW101 5090150 YP_001196250.1 CDS Fjoh_3921 NC_009441.1 4670139 4671572 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4670139..4671572) Flavobacterium johnsoniae UW101 5090151 YP_001196251.1 CDS Fjoh_3922 NC_009441.1 4671585 4672406 R hypothetical protein complement(4671585..4672406) Flavobacterium johnsoniae UW101 5090152 YP_001196252.1 CDS Fjoh_3923 NC_009441.1 4672408 4673622 R hypothetical protein complement(4672408..4673622) Flavobacterium johnsoniae UW101 5090153 YP_001196253.1 CDS Fjoh_3924 NC_009441.1 4673622 4673987 R PFAM: response regulator receiver; response regulator receiver protein complement(4673622..4673987) Flavobacterium johnsoniae UW101 5090154 YP_001196254.1 CDS Fjoh_3925 NC_009441.1 4674070 4676058 R PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; GAF sensor hybrid histidine kinase complement(4674070..4676058) Flavobacterium johnsoniae UW101 5090155 YP_001196255.1 CDS Fjoh_3926 NC_009441.1 4676355 4677272 D PFAM: protein of unknown function UPF0187; hypothetical protein 4676355..4677272 Flavobacterium johnsoniae UW101 5090156 YP_001196256.1 CDS Fjoh_3927 NC_009441.1 4677489 4677821 R hypothetical protein complement(4677489..4677821) Flavobacterium johnsoniae UW101 5090157 YP_001196257.1 CDS Fjoh_3928 NC_009441.1 4677873 4678226 R hypothetical protein complement(4677873..4678226) Flavobacterium johnsoniae UW101 5090158 YP_001196258.1 CDS Fjoh_3929 NC_009441.1 4678415 4678738 R hypothetical protein complement(4678415..4678738) Flavobacterium johnsoniae UW101 5090159 YP_001196259.1 CDS Fjoh_3930 NC_009441.1 4678735 4680255 R hypothetical protein complement(4678735..4680255) Flavobacterium johnsoniae UW101 5090160 YP_001196260.1 CDS Fjoh_3931 NC_009441.1 4680283 4682133 R PFAM: Rhs element Vgr protein; Rhs element Vgr protein complement(4680283..4682133) Flavobacterium johnsoniae UW101 5090161 YP_001196261.1 CDS Fjoh_3932 NC_009441.1 4682269 4683399 R TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(4682269..4683399) Flavobacterium johnsoniae UW101 5090162 YP_001196262.1 CDS Fjoh_3933 NC_009441.1 4683403 4687782 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; outer membrane efflux protein; CzcA family heavy metal efflux protein complement(4683403..4687782) Flavobacterium johnsoniae UW101 5090163 YP_001196263.1 CDS Fjoh_3934 NC_009441.1 4687867 4688244 R hypothetical protein complement(4687867..4688244) Flavobacterium johnsoniae UW101 5090164 YP_001196264.1 CDS Fjoh_3935 NC_009441.1 4688418 4689338 D PFAM: Phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 4688418..4689338 Flavobacterium johnsoniae UW101 5090165 YP_001196265.1 CDS Fjoh_3936 NC_009441.1 4689339 4691612 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; Phytochrome, central region domain protein; PAS fold-2 domain protein; multi-sensor signal transduction histidine kinase complement(4689339..4691612) Flavobacterium johnsoniae UW101 5090166 YP_001196266.1 CDS Fjoh_3937 NC_009441.1 4691612 4692214 R PFAM: Haem oxygenase; heme oxygenase complement(4691612..4692214) Flavobacterium johnsoniae UW101 5090167 YP_001196267.1 CDS Fjoh_3938 NC_009441.1 4692358 4692996 R hypothetical protein complement(4692358..4692996) Flavobacterium johnsoniae UW101 5090168 YP_001196268.1 CDS Fjoh_3939 NC_009441.1 4693024 4693791 R PFAM: Methyltransferase type 11; Methyltransferase type 12; trans-aconitate 2-methyltransferase complement(4693024..4693791) Flavobacterium johnsoniae UW101 5089892 YP_001196269.1 CDS Fjoh_3940 NC_009441.1 4694038 4694574 D hypothetical protein 4694038..4694574 Flavobacterium johnsoniae UW101 5089893 YP_001196270.1 CDS Fjoh_3941 NC_009441.1 4694722 4697538 R PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein complement(4694722..4697538) Flavobacterium johnsoniae UW101 5089894 YP_001196271.1 CDS Fjoh_3942 NC_009441.1 4697686 4700280 R PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase complement(4697686..4700280) Flavobacterium johnsoniae UW101 5089895 YP_001196272.1 CDS Fjoh_3943 NC_009441.1 4700302 4702281 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; redoxin domain-containing protein complement(4700302..4702281) Flavobacterium johnsoniae UW101 5089896 YP_001196273.1 CDS Fjoh_3944 NC_009441.1 4702293 4703648 R hypothetical protein complement(4702293..4703648) Flavobacterium johnsoniae UW101 5089897 YP_001196274.1 CDS Fjoh_3945 NC_009441.1 4703667 4707236 R PFAM: TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; TonB-dependent receptor complement(4703667..4707236) Flavobacterium johnsoniae UW101 5089898 YP_001196275.1 CDS Fjoh_3946 NC_009441.1 4707398 4708453 R PFAM: FecR protein; FecR anti-FecI sigma factor complement(4707398..4708453) Flavobacterium johnsoniae UW101 5089899 YP_001196276.1 CDS Fjoh_3947 NC_009441.1 4708542 4709084 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(4708542..4709084) Flavobacterium johnsoniae UW101 5089900 YP_001196277.1 CDS Fjoh_3948 NC_009441.1 4709388 4710080 R hypothetical protein complement(4709388..4710080) Flavobacterium johnsoniae UW101 5089901 YP_001196278.1 CDS Fjoh_3949 NC_009441.1 4710085 4711068 R hypothetical protein complement(4710085..4711068) Flavobacterium johnsoniae UW101 5089902 YP_001196279.1 CDS Fjoh_3950 NC_009441.1 4711256 4713217 R PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; OmpA/MotB domain-containing protein complement(4711256..4713217) Flavobacterium johnsoniae UW101 5089903 YP_001196280.1 CDS Fjoh_3951 NC_009441.1 4713220 4714131 R hypothetical protein complement(4713220..4714131) Flavobacterium johnsoniae UW101 5089904 YP_001196281.1 CDS Fjoh_3952 NC_009441.1 4714193 4723768 R TIGRFAM: conserved repeat domain; outer membrane adhesin like proteiin; PFAM: protein of unknown function DUF11; hypothetical protein complement(4714193..4723768) Flavobacterium johnsoniae UW101 5089905 YP_001196282.1 CDS Fjoh_3953 NC_009441.1 4723780 4724589 R hypothetical protein complement(4723780..4724589) Flavobacterium johnsoniae UW101 5089906 YP_001196283.1 CDS Fjoh_3954 NC_009441.1 4724991 4726055 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(4724991..4726055) Flavobacterium johnsoniae UW101 5089907 YP_001196284.1 CDS Fjoh_3955 NC_009441.1 4726165 4726767 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 4726165..4726767 Flavobacterium johnsoniae UW101 5089908 YP_001196285.1 CDS Fjoh_3956 NC_009441.1 4726863 4727252 D PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 4726863..4727252 Flavobacterium johnsoniae UW101 5089909 YP_001196286.1 CDS Fjoh_3957 NC_009441.1 4727396 4727764 R PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator complement(4727396..4727764) Flavobacterium johnsoniae UW101 5089910 YP_001196287.1 CDS Fjoh_3958 NC_009441.1 4727845 4728720 D PFAM: NAD-dependent epimerase/dehydratase; TrkA-N domain protein; NmrA family protein; NmrA family protein 4727845..4728720 Flavobacterium johnsoniae UW101 5089911 YP_001196288.1 CDS Fjoh_3959 NC_009441.1 4728804 4730222 R hypothetical protein complement(4728804..4730222) Flavobacterium johnsoniae UW101 5089912 YP_001196289.1 CDS Fjoh_3960 NC_009441.1 4730203 4731558 R PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein complement(4730203..4731558) Flavobacterium johnsoniae UW101 5089913 YP_001196290.1 CDS Fjoh_3961 NC_009441.1 4731561 4733216 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4731561..4733216) Flavobacterium johnsoniae UW101 5089914 YP_001196291.1 CDS Fjoh_3962 NC_009441.1 4733319 4733723 R hypothetical protein complement(4733319..4733723) Flavobacterium johnsoniae UW101 5089915 YP_001196292.1 CDS Fjoh_3963 NC_009441.1 4733932 4734276 R PFAM: DoxX family protein; DoxX family protein complement(4733932..4734276) Flavobacterium johnsoniae UW101 5089916 YP_001196293.1 CDS Fjoh_3964 NC_009441.1 4734621 4735127 D TetR family transcriptional regulator 4734621..4735127 Flavobacterium johnsoniae UW101 5089917 YP_001196294.1 CDS Fjoh_3965 NC_009441.1 4735355 4736596 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator transporter 4735355..4736596 Flavobacterium johnsoniae UW101 5089918 YP_001196295.1 CDS Fjoh_3966 NC_009441.1 4736665 4738182 R PFAM: Glycosyl hydrolase family 32, N terminal domain protein; glycosyl hydrolase family 32 protein complement(4736665..4738182) Flavobacterium johnsoniae UW101 5089919 YP_001196296.1 CDS Fjoh_3967 NC_009441.1 4738611 4740800 R TIGRFAM: Sucrose-phosphate phosphatase subfamily; HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase, group 1; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; sucrose-phosphate phosphatase subfamily protein complement(4738611..4740800) Flavobacterium johnsoniae UW101 5089920 YP_001196297.1 CDS Fjoh_3968 NC_009441.1 4740992 4741681 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(4740992..4741681) Flavobacterium johnsoniae UW101 5089921 YP_001196298.1 CDS Fjoh_3969 NC_009441.1 4741678 4742730 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(4741678..4742730) Flavobacterium johnsoniae UW101 5089922 YP_001196299.1 CDS Fjoh_3970 NC_009441.1 4742841 4745222 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 4742841..4745222 Flavobacterium johnsoniae UW101 5089923 YP_001196300.1 CDS Fjoh_3971 NC_009441.1 4745465 4756273 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; hypothetical protein 4745465..4756273 Flavobacterium johnsoniae UW101 5089924 YP_001196301.1 CDS Fjoh_3972 NC_009441.1 4756302 4757225 D hypothetical protein 4756302..4757225 Flavobacterium johnsoniae UW101 5089925 YP_001196302.1 CDS Fjoh_3973 NC_009441.1 4757237 4759165 D PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; OmpA/MotB domain-containing protein 4757237..4759165 Flavobacterium johnsoniae UW101 5089926 YP_001196303.1 CDS Fjoh_3974 NC_009441.1 4759309 4760433 D TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 4759309..4760433 Flavobacterium johnsoniae UW101 5089927 YP_001196304.1 CDS Fjoh_3975 NC_009441.1 4760650 4760979 R hypothetical protein complement(4760650..4760979) Flavobacterium johnsoniae UW101 5089928 YP_001196305.1 CDS Fjoh_3976 NC_009441.1 4761110 4761853 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(4761110..4761853) Flavobacterium johnsoniae UW101 5089929 YP_001196306.1 CDS Fjoh_3977 NC_009441.1 4761850 4763877 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(4761850..4763877) Flavobacterium johnsoniae UW101 5089930 YP_001196307.1 CDS Fjoh_3978 NC_009441.1 4764125 4764580 D hypothetical protein 4764125..4764580 Flavobacterium johnsoniae UW101 5089931 YP_001196308.1 CDS Fjoh_3979 NC_009441.1 4764581 4765045 D hypothetical protein 4764581..4765045 Flavobacterium johnsoniae UW101 5089932 YP_001196309.1 CDS Fjoh_3980 NC_009441.1 4765032 4765550 D hypothetical protein 4765032..4765550 Flavobacterium johnsoniae UW101 5089933 YP_001196310.1 CDS Fjoh_3981 NC_009441.1 4765562 4766110 D hypothetical protein 4765562..4766110 Flavobacterium johnsoniae UW101 5089934 YP_001196311.1 CDS Fjoh_3982 NC_009441.1 4766192 4766884 R hypothetical protein complement(4766192..4766884) Flavobacterium johnsoniae UW101 5089935 YP_001196312.1 CDS Fjoh_3983 NC_009441.1 4767098 4768246 D hypothetical protein 4767098..4768246 Flavobacterium johnsoniae UW101 5089936 YP_001196313.1 CDS Fjoh_3984 NC_009441.1 4768322 4769134 R TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; YaeC family lipoprotein complement(4768322..4769134) Flavobacterium johnsoniae UW101 5089937 YP_001196314.1 CDS Fjoh_3985 NC_009441.1 4769170 4769823 R part of the MetNIQ methionine uptake system; DL-methionine transporter permease complement(4769170..4769823) Flavobacterium johnsoniae UW101 5089938 YP_001196315.1 CDS metN NC_009441.1 4769816 4770847 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(4769816..4770847) Flavobacterium johnsoniae UW101 5089939 YP_001196316.1 CDS Fjoh_3987 NC_009441.1 4771105 4771599 R PFAM: Cupin 2, conserved barrel domain protein; cupin complement(4771105..4771599) Flavobacterium johnsoniae UW101 5089940 YP_001196317.1 CDS Fjoh_3988 NC_009441.1 4771596 4772594 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(4771596..4772594) Flavobacterium johnsoniae UW101 5089941 YP_001196318.1 CDS Fjoh_3989 NC_009441.1 4772687 4773064 D PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 4772687..4773064 Flavobacterium johnsoniae UW101 5089942 YP_001196319.1 CDS Fjoh_3990 NC_009441.1 4773309 4774793 R PFAM: aminotransferase, class V; class V aminotransferase complement(4773309..4774793) Flavobacterium johnsoniae UW101 5089943 YP_001196320.1 CDS Fjoh_3991 NC_009441.1 4774956 4775945 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(4774956..4775945) Flavobacterium johnsoniae UW101 5089944 YP_001196321.1 CDS Fjoh_3992 NC_009441.1 4776554 4777639 R PFAM: 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase complement(4776554..4777639) Flavobacterium johnsoniae UW101 5089945 YP_001196322.1 CDS Fjoh_3993 NC_009441.1 4777656 4778105 R hypothetical protein complement(4777656..4778105) Flavobacterium johnsoniae UW101 5089946 YP_001196323.1 CDS Fjoh_3994 NC_009441.1 4778106 4778840 R PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4778106..4778840) Flavobacterium johnsoniae UW101 5089947 YP_001196324.1 CDS Fjoh_3995 NC_009441.1 4778845 4779063 R TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(4778845..4779063) Flavobacterium johnsoniae UW101 5091489 YP_001196325.1 CDS Fjoh_3996 NC_009441.1 4779069 4779623 R hypothetical protein complement(4779069..4779623) Flavobacterium johnsoniae UW101 5091490 YP_001196326.1 CDS Fjoh_3997 NC_009441.1 4779982 4780632 R PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(4779982..4780632) Flavobacterium johnsoniae UW101 5091491 YP_001196327.1 CDS Fjoh_3998 NC_009441.1 4780723 4781124 D hypothetical protein 4780723..4781124 Flavobacterium johnsoniae UW101 5091492 YP_001196328.1 CDS Fjoh_3999 NC_009441.1 4781554 4782432 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4781554..4782432 Flavobacterium johnsoniae UW101 5091493 YP_001196329.1 CDS Fjoh_4000 NC_009441.1 4782776 4783588 D SMART: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 4782776..4783588 Flavobacterium johnsoniae UW101 5091494 YP_001196330.1 CDS Fjoh_4001 NC_009441.1 4783860 4784627 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(4783860..4784627) Flavobacterium johnsoniae UW101 5091495 YP_001196331.1 CDS Fjoh_4002 NC_009441.1 4784608 4785624 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(4784608..4785624) Flavobacterium johnsoniae UW101 5091496 YP_001196332.1 CDS Fjoh_4003 NC_009441.1 4785970 4786710 R PFAM: protein of unknown function DUF1223; hypothetical protein complement(4785970..4786710) Flavobacterium johnsoniae UW101 5091497 YP_001196333.1 CDS Fjoh_4004 NC_009441.1 4786803 4787213 R PFAM: OsmC family protein; OsmC family protein complement(4786803..4787213) Flavobacterium johnsoniae UW101 5091498 YP_001196334.1 CDS Fjoh_4005 NC_009441.1 4787300 4788343 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4787300..4788343) Flavobacterium johnsoniae UW101 5091499 YP_001196335.1 CDS Fjoh_4006 NC_009441.1 4788706 4789119 R PFAM: Cupin 2, conserved barrel domain protein; cupin 2 domain-containing protein complement(4788706..4789119) Flavobacterium johnsoniae UW101 5091500 YP_001196336.1 CDS Fjoh_4007 NC_009441.1 4789492 4790235 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(4789492..4790235) Flavobacterium johnsoniae UW101 5091501 YP_001196337.1 CDS Fjoh_4008 NC_009441.1 4790561 4792240 D acts as a promotor non-specific transcription repressor; circadian clock protein KaiC 4790561..4792240 Flavobacterium johnsoniae UW101 5091502 YP_001196338.1 CDS Fjoh_4009 NC_009441.1 4792242 4792535 D PFAM: KaiB domain protein; KaiB domain-containing protein 4792242..4792535 Flavobacterium johnsoniae UW101 5091503 YP_001196339.1 CDS Fjoh_4010 NC_009441.1 4792538 4792837 D PFAM: KaiB domain protein; KaiB domain-containing protein 4792538..4792837 Flavobacterium johnsoniae UW101 5091504 YP_001196340.1 CDS Fjoh_4011 NC_009441.1 4792839 4794095 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4792839..4794095 Flavobacterium johnsoniae UW101 5091505 YP_001196341.1 CDS Fjoh_4012 NC_009441.1 4794097 4794501 D PFAM: response regulator receiver; response regulator receiver protein 4794097..4794501 Flavobacterium johnsoniae UW101 5091506 YP_001196342.1 CDS Fjoh_4013 NC_009441.1 4794859 4795092 D hypothetical protein 4794859..4795092 Flavobacterium johnsoniae UW101 5091507 YP_001196343.1 CDS Fjoh_4014 NC_009441.1 4795409 4795804 D hypothetical protein 4795409..4795804 Flavobacterium johnsoniae UW101 5091508 YP_001196344.1 CDS Fjoh_4015 NC_009441.1 4795832 4797640 D PFAM: Rhs element Vgr protein; Rhs element Vgr protein 4795832..4797640 Flavobacterium johnsoniae UW101 5091509 YP_001196345.1 CDS Fjoh_4016 NC_009441.1 4797647 4797994 D hypothetical protein 4797647..4797994 Flavobacterium johnsoniae UW101 5091510 YP_001196346.1 CDS Fjoh_4017 NC_009441.1 4798000 4799385 D hypothetical protein 4798000..4799385 Flavobacterium johnsoniae UW101 5091511 YP_001196347.1 CDS Fjoh_4018 NC_009441.1 4799363 4799890 D hypothetical protein 4799363..4799890 Flavobacterium johnsoniae UW101 5091512 YP_001196348.1 CDS Fjoh_4019 NC_009441.1 4800292 4800876 D hypothetical protein 4800292..4800876 Flavobacterium johnsoniae UW101 5091513 YP_001196349.1 CDS Fjoh_4020 NC_009441.1 4800954 4801325 D hypothetical protein 4800954..4801325 Flavobacterium johnsoniae UW101 5091514 YP_001196350.1 CDS Fjoh_4021 NC_009441.1 4801373 4801510 D hypothetical protein 4801373..4801510 Flavobacterium johnsoniae UW101 5091515 YP_001196351.1 CDS Fjoh_4022 NC_009441.1 4801698 4802141 D hypothetical protein 4801698..4802141 Flavobacterium johnsoniae UW101 5091516 YP_001196352.1 CDS Fjoh_4023 NC_009441.1 4802162 4802692 D hypothetical protein 4802162..4802692 Flavobacterium johnsoniae UW101 5091517 YP_001196353.1 CDS Fjoh_4024 NC_009441.1 4802773 4804029 R hypothetical protein complement(4802773..4804029) Flavobacterium johnsoniae UW101 5091518 YP_001196354.1 CDS Fjoh_4025 NC_009441.1 4804310 4806793 R hypothetical protein complement(4804310..4806793) Flavobacterium johnsoniae UW101 5091519 YP_001196355.1 CDS Fjoh_4026 NC_009441.1 4807139 4807555 D PFAM: OsmC family protein; OsmC family protein 4807139..4807555 Flavobacterium johnsoniae UW101 5091520 YP_001196356.1 CDS Fjoh_4027 NC_009441.1 4807615 4808385 D hypothetical protein 4807615..4808385 Flavobacterium johnsoniae UW101 5091521 YP_001196357.1 CDS Fjoh_4028 NC_009441.1 4808560 4809531 R PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(4808560..4809531) Flavobacterium johnsoniae UW101 5091522 YP_001196358.1 CDS Fjoh_4029 NC_009441.1 4809850 4810575 R PFAM: Oxidoreductase FAD-binding domain protein; FAD-binding 9, siderophore-interacting domain protein; oxidoreductase FAD-binding subunit complement(4809850..4810575) Flavobacterium johnsoniae UW101 5091523 YP_001196359.1 CDS Fjoh_4030 NC_009441.1 4810657 4811505 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(4810657..4811505) Flavobacterium johnsoniae UW101 5091524 YP_001196360.1 CDS Fjoh_4031 NC_009441.1 4811780 4812202 R hypothetical protein complement(4811780..4812202) Flavobacterium johnsoniae UW101 5091525 YP_001196361.1 CDS Fjoh_4032 NC_009441.1 4812392 4812877 R PFAM: regulatory protein, MarR; MarR family transcriptional regulator complement(4812392..4812877) Flavobacterium johnsoniae UW101 5091526 YP_001196362.1 CDS Fjoh_4033 NC_009441.1 4812880 4813371 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4812880..4813371) Flavobacterium johnsoniae UW101 5091527 YP_001196363.1 CDS Fjoh_4034 NC_009441.1 4813602 4813946 D PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 4813602..4813946 Flavobacterium johnsoniae UW101 5091528 YP_001196364.1 CDS Fjoh_4035 NC_009441.1 4813957 4814439 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4813957..4814439 Flavobacterium johnsoniae UW101 5091529 YP_001196365.1 CDS Fjoh_4038 NC_009441.1 4817441 4818304 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 4817441..4818304 Flavobacterium johnsoniae UW101 5091531 YP_001196366.1 CDS Fjoh_4039 NC_009441.1 4818465 4820909 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor 4818465..4820909 Flavobacterium johnsoniae UW101 5091532 YP_001196367.1 CDS Fjoh_4040 NC_009441.1 4820954 4822063 D PFAM: PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 4820954..4822063 Flavobacterium johnsoniae UW101 5091533 YP_001196368.1 CDS Fjoh_4041 NC_009441.1 4822226 4822471 D hypothetical protein 4822226..4822471 Flavobacterium johnsoniae UW101 5091534 YP_001196369.1 CDS Fjoh_4042 NC_009441.1 4822581 4823597 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 4822581..4823597 Flavobacterium johnsoniae UW101 5091535 YP_001196370.1 CDS Fjoh_4043 NC_009441.1 4823650 4824561 D PFAM: PfkB domain protein; ribokinase-like domain-containing protein 4823650..4824561 Flavobacterium johnsoniae UW101 5091536 YP_001196371.1 CDS Fjoh_4044 NC_009441.1 4824592 4825854 D TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1; L-fucose transporter 4824592..4825854 Flavobacterium johnsoniae UW101 5091537 YP_001196372.1 CDS Fjoh_4045 NC_009441.1 4825893 4826744 D PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 4825893..4826744 Flavobacterium johnsoniae UW101 5091538 YP_001196373.1 CDS Fjoh_4046 NC_009441.1 4827098 4827637 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 4827098..4827637 Flavobacterium johnsoniae UW101 5091539 YP_001196374.1 CDS Fjoh_4047 NC_009441.1 4827687 4828229 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 4827687..4828229 Flavobacterium johnsoniae UW101 5091540 YP_001196375.1 CDS Fjoh_4048 NC_009441.1 4828243 4828782 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 4828243..4828782 Flavobacterium johnsoniae UW101 5091541 YP_001196376.1 CDS Fjoh_4049 NC_009441.1 4828848 4829978 D hypothetical protein 4828848..4829978 Flavobacterium johnsoniae UW101 5091542 YP_001196377.1 CDS Fjoh_4050 NC_009441.1 4829975 4830913 D PFAM: formyl transferase domain protein; formyl transferase domain-containing protein 4829975..4830913 Flavobacterium johnsoniae UW101 5091543 YP_001196378.1 CDS Fjoh_4051 NC_009441.1 4830888 4837676 D SMART: PKD domain containing protein; Immunoglobulin subtype; PKD domain-containing protein 4830888..4837676 Flavobacterium johnsoniae UW101 5091544 YP_001196379.1 CDS Fjoh_4052 NC_009441.1 4837726 4838559 D hypothetical protein 4837726..4838559 Flavobacterium johnsoniae UW101 5090778 YP_001196380.1 CDS Fjoh_4053 NC_009441.1 4838730 4839365 D PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator 4838730..4839365 Flavobacterium johnsoniae UW101 5090779 YP_001196381.1 CDS Fjoh_4054 NC_009441.1 4839522 4839893 R hypothetical protein complement(4839522..4839893) Flavobacterium johnsoniae UW101 5090780 YP_001196382.1 CDS Fjoh_4055 NC_009441.1 4840220 4841152 D TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 4840220..4841152 Flavobacterium johnsoniae UW101 5090781 YP_001196383.1 CDS Fjoh_4056 NC_009441.1 4841170 4842693 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase 4841170..4842693 Flavobacterium johnsoniae UW101 5090782 YP_001196384.1 CDS Fjoh_4057 NC_009441.1 4842705 4843436 D PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein 4842705..4843436 Flavobacterium johnsoniae UW101 5090783 YP_001196385.1 CDS Fjoh_4058 NC_009441.1 4843449 4845572 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 4843449..4845572 Flavobacterium johnsoniae UW101 5090784 YP_001196386.1 CDS Fjoh_4059 NC_009441.1 4845553 4845717 D hypothetical protein 4845553..4845717 Flavobacterium johnsoniae UW101 5090785 YP_001196387.1 CDS Fjoh_4060 NC_009441.1 4845803 4846390 D TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 4845803..4846390 Flavobacterium johnsoniae UW101 5090786 YP_001196388.1 CDS Fjoh_4061 NC_009441.1 4846433 4846879 D hypothetical protein 4846433..4846879 Flavobacterium johnsoniae UW101 5090787 YP_001196389.1 CDS Fjoh_4062 NC_009441.1 4847536 4849137 R TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; Na+/H+ antiporter complement(4847536..4849137) Flavobacterium johnsoniae UW101 5090788 YP_001196390.1 CDS Fjoh_4063 NC_009441.1 4849326 4849988 D PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 4849326..4849988 Flavobacterium johnsoniae UW101 5090789 YP_001196391.1 CDS Fjoh_4064 NC_009441.1 4849991 4850560 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 4849991..4850560 Flavobacterium johnsoniae UW101 5090790 YP_001196392.1 CDS Fjoh_4065 NC_009441.1 4850803 4852500 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(4850803..4852500) Flavobacterium johnsoniae UW101 5090791 YP_001196393.1 CDS Fjoh_4066 NC_009441.1 4852513 4853487 R PFAM: ribonucleotide reductase; ribonucleotide reductase complement(4852513..4853487) Flavobacterium johnsoniae UW101 5090792 YP_001196394.1 CDS Fjoh_4067 NC_009441.1 4854224 4855711 D PFAM: Ankyrin; ankyrin 4854224..4855711 Flavobacterium johnsoniae UW101 5090793 YP_001196395.1 CDS Fjoh_4068 NC_009441.1 4855841 4856311 D hypothetical protein 4855841..4856311 Flavobacterium johnsoniae UW101 5090794 YP_001196396.1 CDS Fjoh_4069 NC_009441.1 4856434 4858617 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; Oxidoreductase FAD-binding domain protein; flavodoxin/nitric oxide synthase 4856434..4858617 Flavobacterium johnsoniae UW101 5090795 YP_001196397.1 CDS Fjoh_4070 NC_009441.1 4859149 4860156 D PFAM: ApbE family lipoprotein; ApbE family lipoprotein 4859149..4860156 Flavobacterium johnsoniae UW101 5090796 YP_001196398.1 CDS Fjoh_4071 NC_009441.1 4860376 4862754 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 4860376..4862754 Flavobacterium johnsoniae UW101 5090797 YP_001196399.1 CDS Fjoh_4072 NC_009441.1 4862786 4864120 D hypothetical protein 4862786..4864120 Flavobacterium johnsoniae UW101 5090798 YP_001196400.1 CDS Fjoh_4073 NC_009441.1 4864215 4865426 R hypothetical protein complement(4864215..4865426) Flavobacterium johnsoniae UW101 5090799 YP_001196401.1 CDS Fjoh_4074 NC_009441.1 4865726 4868146 R PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase complement(4865726..4868146) Flavobacterium johnsoniae UW101 5090800 YP_001196402.1 CDS Fjoh_4075 NC_009441.1 4868404 4871931 R PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase complement(4868404..4871931) Flavobacterium johnsoniae UW101 5090801 YP_001196403.1 CDS Fjoh_4076 NC_009441.1 4872031 4874784 R hypothetical protein complement(4872031..4874784) Flavobacterium johnsoniae UW101 5090802 YP_001196404.1 CDS Fjoh_4077 NC_009441.1 4874913 4875815 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(4874913..4875815) Flavobacterium johnsoniae UW101 5090803 YP_001196405.1 CDS Fjoh_4078 NC_009441.1 4875957 4877102 R PFAM: glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase complement(4875957..4877102) Flavobacterium johnsoniae UW101 5090804 YP_001196406.1 CDS Fjoh_4079 NC_009441.1 4877470 4877967 D hypothetical protein 4877470..4877967 Flavobacterium johnsoniae UW101 5090805 YP_001196407.1 CDS Fjoh_4080 NC_009441.1 4877994 4880744 R PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase N-terminal domain protein; alpha-L-rhamnosidase complement(4877994..4880744) Flavobacterium johnsoniae UW101 5090806 YP_001196408.1 CDS Fjoh_4081 NC_009441.1 4880931 4881827 R hypothetical protein complement(4880931..4881827) Flavobacterium johnsoniae UW101 5090807 YP_001196409.1 CDS Fjoh_4082 NC_009441.1 4882093 4883661 R hypothetical protein complement(4882093..4883661) Flavobacterium johnsoniae UW101 5090808 YP_001196410.1 CDS Fjoh_4083 NC_009441.1 4883848 4886298 R hypothetical protein complement(4883848..4886298) Flavobacterium johnsoniae UW101 5090809 YP_001196411.1 CDS Fjoh_4084 NC_009441.1 4886574 4887992 R hypothetical protein complement(4886574..4887992) Flavobacterium johnsoniae UW101 5090810 YP_001196412.1 CDS Fjoh_4085 NC_009441.1 4888143 4890923 R PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase N-terminal domain protein; alpha-L-rhamnosidase complement(4888143..4890923) Flavobacterium johnsoniae UW101 5090811 YP_001196413.1 CDS Fjoh_4086 NC_009441.1 4891073 4892935 R hypothetical protein complement(4891073..4892935) Flavobacterium johnsoniae UW101 5090812 YP_001196414.1 CDS Fjoh_4087 NC_009441.1 4893231 4894148 R hypothetical protein complement(4893231..4894148) Flavobacterium johnsoniae UW101 5090813 YP_001196415.1 CDS Fjoh_4088 NC_009441.1 4894247 4895815 R PFAM: glycoside hydrolase, family 28; SMART: Parallel beta-helix repeat; glycoside hydrolase complement(4894247..4895815) Flavobacterium johnsoniae UW101 5090814 YP_001196416.1 CDS Fjoh_4089 NC_009441.1 4896046 4897452 R hypothetical protein complement(4896046..4897452) Flavobacterium johnsoniae UW101 5090815 YP_001196417.1 CDS Fjoh_4090 NC_009441.1 4897609 4900794 R hypothetical protein complement(4897609..4900794) Flavobacterium johnsoniae UW101 5090816 YP_001196418.1 CDS Fjoh_4091 NC_009441.1 4900947 4902653 R hypothetical protein complement(4900947..4902653) Flavobacterium johnsoniae UW101 5090817 YP_001196419.1 CDS Fjoh_4092 NC_009441.1 4902862 4903530 R hypothetical protein complement(4902862..4903530) Flavobacterium johnsoniae UW101 5090818 YP_001196420.1 CDS Fjoh_4093 NC_009441.1 4903714 4905426 R hypothetical protein complement(4903714..4905426) Flavobacterium johnsoniae UW101 5090819 YP_001196421.1 CDS Fjoh_4094 NC_009441.1 4905531 4907531 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(4905531..4907531) Flavobacterium johnsoniae UW101 5090820 YP_001196422.1 CDS Fjoh_4095 NC_009441.1 4907550 4910921 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(4907550..4910921) Flavobacterium johnsoniae UW101 5090821 YP_001196423.2 CDS Fjoh_4096 NC_009441.1 4911589 4912575 R PFAM: Pectinesterase; pectinesterase complement(4911589..4912575) Flavobacterium johnsoniae UW101 5090822 YP_001196424.1 CDS Fjoh_4097 NC_009441.1 4912791 4914809 R PFAM: protein of unknown function DUF1680; hypothetical protein complement(4912791..4914809) Flavobacterium johnsoniae UW101 5090823 YP_001196425.1 CDS Fjoh_4098 NC_009441.1 4914988 4917447 R hypothetical protein complement(4914988..4917447) Flavobacterium johnsoniae UW101 5090824 YP_001196426.1 CDS Fjoh_4099 NC_009441.1 4917463 4919847 R hypothetical protein complement(4917463..4919847) Flavobacterium johnsoniae UW101 5090825 YP_001196427.1 CDS Fjoh_4100 NC_009441.1 4919952 4921376 R PFAM: protein of unknown function DUF303, acetylesterase; sialate O-acetylesterase complement(4919952..4921376) Flavobacterium johnsoniae UW101 5090826 YP_001196428.1 CDS Fjoh_4101 NC_009441.1 4921642 4925031 R PFAM: glycoside hydrolase family 2, sugar binding; glycoside hydrolase complement(4921642..4925031) Flavobacterium johnsoniae UW101 5090827 YP_001196429.1 CDS Fjoh_4102 NC_009441.1 4925283 4928609 R PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; beta-galactosidase complement(4925283..4928609) Flavobacterium johnsoniae UW101 5090828 YP_001196430.1 CDS Fjoh_4103 NC_009441.1 4928840 4929964 R hypothetical protein complement(4928840..4929964) Flavobacterium johnsoniae UW101 5090829 YP_001196431.1 CDS Fjoh_4104 NC_009441.1 4930085 4931761 R hypothetical protein complement(4930085..4931761) Flavobacterium johnsoniae UW101 5090830 YP_001196432.1 CDS Fjoh_4105 NC_009441.1 4931935 4934121 R PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase complement(4931935..4934121) Flavobacterium johnsoniae UW101 5090831 YP_001196433.1 CDS Fjoh_4106 NC_009441.1 4934550 4935368 R PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; Cupin 2, conserved barrel domain protein; AraC family transcriptional regulator complement(4934550..4935368) Flavobacterium johnsoniae UW101 5090832 YP_001196434.1 CDS Fjoh_4107 NC_009441.1 4935470 4936684 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 4935470..4936684 Flavobacterium johnsoniae UW101 5094017 YP_001196435.1 CDS Fjoh_4108 NC_009441.1 4936913 4938283 D PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 4936913..4938283 Flavobacterium johnsoniae UW101 5094018 YP_001196436.1 CDS Fjoh_4109 NC_009441.1 4938713 4938928 D PFAM: helix-turn-helix domain protein; bacteriophage CI repressor; XRE family transcriptional regulator 4938713..4938928 Flavobacterium johnsoniae UW101 5094019 YP_001196437.1 CDS Fjoh_4110 NC_009441.1 4938984 4939544 R hypothetical protein complement(4938984..4939544) Flavobacterium johnsoniae UW101 5094020 YP_001196438.1 CDS Fjoh_4111 NC_009441.1 4939544 4939885 R hypothetical protein complement(4939544..4939885) Flavobacterium johnsoniae UW101 5094021 YP_001196439.1 CDS Fjoh_4112 NC_009441.1 4940166 4941746 R TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS family solute/sodium (Na+) symporter complement(4940166..4941746) Flavobacterium johnsoniae UW101 5094022 YP_001196440.1 CDS Fjoh_4113 NC_009441.1 4941743 4942807 R PFAM: oxidoreductase domain protein; homoserine dehydrogenase, NAD-binding; oxidoreductase domain-containing protein complement(4941743..4942807) Flavobacterium johnsoniae UW101 5094023 YP_001196441.1 CDS Fjoh_4114 NC_009441.1 4942959 4945457 R hypothetical protein complement(4942959..4945457) Flavobacterium johnsoniae UW101 5094024 YP_001196442.1 CDS Fjoh_4115 NC_009441.1 4945891 4947573 D PFAM: glycoside hydrolase, family 28; glycoside hydrolase 4945891..4947573 Flavobacterium johnsoniae UW101 5094025 YP_001196443.1 CDS Fjoh_4116 NC_009441.1 4947587 4948777 D TIGRFAM: pectate lyase; pectate lyase 4947587..4948777 Flavobacterium johnsoniae UW101 5094026 YP_001196444.1 CDS Fjoh_4117 NC_009441.1 4949086 4949922 R PFAM: amidohydrolase 2; amidohydrolase complement(4949086..4949922) Flavobacterium johnsoniae UW101 5094027 YP_001196445.1 CDS Fjoh_4118 NC_009441.1 4949929 4950726 R PFAM: short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(4949929..4950726) Flavobacterium johnsoniae UW101 5094028 YP_001196446.1 CDS Fjoh_4119 NC_009441.1 4951044 4952114 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(4951044..4952114) Flavobacterium johnsoniae UW101 5094029 YP_001196447.1 CDS Fjoh_4120 NC_009441.1 4952272 4953126 R PFAM: fumarylacetoacetate (FAA) hydrolase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase complement(4952272..4953126) Flavobacterium johnsoniae UW101 5094030 YP_001196448.1 CDS Fjoh_4121 NC_009441.1 4953275 4954039 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(4953275..4954039) Flavobacterium johnsoniae UW101 5094031 YP_001196449.1 CDS Fjoh_4122 NC_009441.1 4954364 4955512 D sugar ABC transporter periplasmic protein-like protein 4954364..4955512 Flavobacterium johnsoniae UW101 5094032 YP_001196450.1 CDS Fjoh_4123 NC_009441.1 4955509 4956651 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4955509..4956651 Flavobacterium johnsoniae UW101 5094033 YP_001196451.1 CDS Fjoh_4124 NC_009441.1 4956793 4957929 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4956793..4957929 Flavobacterium johnsoniae UW101 5094034 YP_001196452.1 CDS Fjoh_4125 NC_009441.1 4957932 4959158 D PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 4957932..4959158 Flavobacterium johnsoniae UW101 5094035 YP_001196453.1 CDS Fjoh_4126 NC_009441.1 4959194 4960252 D PFAM: oxidoreductase domain protein; oxidoreductase domain-containing protein 4959194..4960252 Flavobacterium johnsoniae UW101 5094036 YP_001196454.1 CDS Fjoh_4127 NC_009441.1 4960375 4960815 D PFAM: MaoC domain protein dehydratase; dehydratase 4960375..4960815 Flavobacterium johnsoniae UW101 5092044 YP_001196455.1 CDS Fjoh_4128 NC_009441.1 4960972 4962267 D TIGRFAM: L-fucose transporter; glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; L-fucose transporter 4960972..4962267 Flavobacterium johnsoniae UW101 5094037 YP_001196456.1 CDS Fjoh_4129 NC_009441.1 4962341 4962841 R hypothetical protein complement(4962341..4962841) Flavobacterium johnsoniae UW101 5094038 YP_001196457.1 CDS Fjoh_4130 NC_009441.1 4963148 4964554 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein complement(4963148..4964554) Flavobacterium johnsoniae UW101 5094039 YP_001196458.1 CDS Fjoh_4131 NC_009441.1 4964572 4967745 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(4964572..4967745) Flavobacterium johnsoniae UW101 5094040 YP_001196459.1 CDS Fjoh_4132 NC_009441.1 4967751 4968905 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(4967751..4968905) Flavobacterium johnsoniae UW101 5094041 YP_001196460.1 CDS Fjoh_4133 NC_009441.1 4969172 4970215 D PFAM: histidine kinase internal region; signal transduction histidine kinase LytS 4969172..4970215 Flavobacterium johnsoniae UW101 5094042 YP_001196461.1 CDS Fjoh_4134 NC_009441.1 4970215 4970946 D PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 4970215..4970946 Flavobacterium johnsoniae UW101 5094043 YP_001196462.1 CDS Fjoh_4135 NC_009441.1 4970966 4971259 D hypothetical protein 4970966..4971259 Flavobacterium johnsoniae UW101 5094044 YP_001196463.1 CDS Fjoh_4136 NC_009441.1 4971373 4972371 D PFAM: glycosidase, PH1107-related; PH1107-like glycosidase 4971373..4972371 Flavobacterium johnsoniae UW101 5094045 YP_001196464.1 CDS Fjoh_4137 NC_009441.1 4972637 4973533 D PFAM: dienelactone hydrolase; carboxymethylenebutenolidase 4972637..4973533 Flavobacterium johnsoniae UW101 5094046 YP_001196465.1 CDS Fjoh_4138 NC_009441.1 4973608 4975020 D PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator 4973608..4975020 Flavobacterium johnsoniae UW101 5094047 YP_001196466.1 CDS Fjoh_4139 NC_009441.1 4975015 4975620 R PFAM: regulatory protein, MarR; MarR family transcriptional regulator complement(4975015..4975620) Flavobacterium johnsoniae UW101 5094048 YP_001196467.1 CDS Fjoh_4140 NC_009441.1 4975694 4975957 R hypothetical protein complement(4975694..4975957) Flavobacterium johnsoniae UW101 5094049 YP_001196468.1 CDS Fjoh_4141 NC_009441.1 4976243 4976470 R hypothetical protein complement(4976243..4976470) Flavobacterium johnsoniae UW101 5094050 YP_001196469.1 CDS Fjoh_4142 NC_009441.1 4976654 4977385 D PFAM: alanine racemase domain protein; alanine racemase 4976654..4977385 Flavobacterium johnsoniae UW101 5094051 YP_001196470.1 CDS Fjoh_4143 NC_009441.1 4977416 4978147 D PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; ATPase central domain-containing protein 4977416..4978147 Flavobacterium johnsoniae UW101 5094052 YP_001196471.1 CDS Fjoh_4144 NC_009441.1 4978196 4978810 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(4978196..4978810) Flavobacterium johnsoniae UW101 5094053 YP_001196472.1 CDS Fjoh_4145 NC_009441.1 4978814 4979290 R PFAM: Redoxin domain protein; Thioredoxin domain; redoxin domain-containing protein complement(4978814..4979290) Flavobacterium johnsoniae UW101 5094054 YP_001196473.1 CDS Fjoh_4146 NC_009441.1 4979561 4980214 R hypothetical protein complement(4979561..4980214) Flavobacterium johnsoniae UW101 5094055 YP_001196474.1 CDS Fjoh_4147 NC_009441.1 4980207 4980800 R hypothetical protein complement(4980207..4980800) Flavobacterium johnsoniae UW101 5094056 YP_001196475.1 CDS Fjoh_4148 NC_009441.1 4980806 4981558 R hypothetical protein complement(4980806..4981558) Flavobacterium johnsoniae UW101 5094057 YP_001196476.1 CDS Fjoh_4149 NC_009441.1 4981647 4982369 R hypothetical protein complement(4981647..4982369) Flavobacterium johnsoniae UW101 5094058 YP_001196477.1 CDS Fjoh_4150 NC_009441.1 4982392 4983336 R hypothetical protein complement(4982392..4983336) Flavobacterium johnsoniae UW101 5094059 YP_001196478.1 CDS Fjoh_4151 NC_009441.1 4983803 4984273 R PFAM: transposase IS200-family protein; transposase IS200-family protein complement(4983803..4984273) Flavobacterium johnsoniae UW101 5094060 YP_001196479.1 CDS Fjoh_4152 NC_009441.1 4984496 4985059 R hypothetical protein complement(4984496..4985059) Flavobacterium johnsoniae UW101 5094061 YP_001196480.1 CDS Fjoh_4153 NC_009441.1 4985109 4985480 R hypothetical protein complement(4985109..4985480) Flavobacterium johnsoniae UW101 5094062 YP_001196481.1 CDS Fjoh_4154 NC_009441.1 4985487 4986848 R hypothetical protein complement(4985487..4986848) Flavobacterium johnsoniae UW101 5094063 YP_001196482.1 CDS Fjoh_4155 NC_009441.1 4986856 4987533 R hypothetical protein complement(4986856..4987533) Flavobacterium johnsoniae UW101 5094064 YP_001196483.1 CDS Fjoh_4156 NC_009441.1 4987536 4988249 R hypothetical protein complement(4987536..4988249) Flavobacterium johnsoniae UW101 5094065 YP_001196484.1 CDS Fjoh_4157 NC_009441.1 4988274 4988870 R hypothetical protein complement(4988274..4988870) Flavobacterium johnsoniae UW101 5094066 YP_001196485.1 CDS Fjoh_4158 NC_009441.1 4988955 4989275 R PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator complement(4988955..4989275) Flavobacterium johnsoniae UW101 5094067 YP_001196486.1 CDS Fjoh_4159 NC_009441.1 4989360 4990346 D polyketide biosynthesis dithiol-disulfide isomerase-like protein 4989360..4990346 Flavobacterium johnsoniae UW101 5094068 YP_001196487.1 CDS Fjoh_4160 NC_009441.1 4990391 4991089 R hypothetical protein complement(4990391..4991089) Flavobacterium johnsoniae UW101 5094069 YP_001196488.1 CDS Fjoh_4161 NC_009441.1 4991099 4991605 R hypothetical protein complement(4991099..4991605) Flavobacterium johnsoniae UW101 5094070 YP_001196489.1 CDS Fjoh_4162 NC_009441.1 4991676 4992149 R PFAM: CinA domain protein; CinA domain-containing protein complement(4991676..4992149) Flavobacterium johnsoniae UW101 5094071 YP_001196490.1 CDS Fjoh_4163 NC_009441.1 4992387 4992869 D hypothetical protein 4992387..4992869 Flavobacterium johnsoniae UW101 5094072 YP_001196491.1 CDS Fjoh_4164 NC_009441.1 4992899 4993318 D hypothetical protein 4992899..4993318 Flavobacterium johnsoniae UW101 5093794 YP_001196492.1 CDS Fjoh_4165 NC_009441.1 4993332 4993556 D hypothetical protein 4993332..4993556 Flavobacterium johnsoniae UW101 5093795 YP_001196493.1 CDS Fjoh_4166 NC_009441.1 4993716 4994096 R hypothetical protein complement(4993716..4994096) Flavobacterium johnsoniae UW101 5093796 YP_001196494.1 CDS Fjoh_4167 NC_009441.1 4994298 4995323 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(4994298..4995323) Flavobacterium johnsoniae UW101 5093797 YP_001196495.1 CDS Fjoh_4168 NC_009441.1 4995496 4997262 R hypothetical protein complement(4995496..4997262) Flavobacterium johnsoniae UW101 5093798 YP_001196496.1 CDS Fjoh_4169 NC_009441.1 4997266 5000550 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(4997266..5000550) Flavobacterium johnsoniae UW101 5093799 YP_001196497.1 CDS Fjoh_4170 NC_009441.1 5000624 5001547 R PFAM: FecR protein; FecR anti-FecI sigma factor complement(5000624..5001547) Flavobacterium johnsoniae UW101 5093800 YP_001196498.1 CDS Fjoh_4171 NC_009441.1 5001705 5002247 R PFAM: regulatory protein, LuxR; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(5001705..5002247) Flavobacterium johnsoniae UW101 5093801 YP_001196499.1 CDS Fjoh_4172 NC_009441.1 5002496 5003545 D hypothetical protein 5002496..5003545 Flavobacterium johnsoniae UW101 5093802 YP_001196500.1 CDS Fjoh_4173 NC_009441.1 5003769 5005694 R PFAM: metallophosphoesterase; metallophosphoesterase complement(5003769..5005694) Flavobacterium johnsoniae UW101 5093803 YP_001196501.1 CDS Fjoh_4174 NC_009441.1 5006226 5009099 R PFAM: Ricin B lectin; Carbohydrate binding family 6; peptidase domain protein; SMART: beta and gamma crystallin; cellulose binding, type IV; carbohydrate-binding family 6 protein complement(5006226..5009099) Flavobacterium johnsoniae UW101 5093804 YP_001196502.1 CDS Fjoh_4175 NC_009441.1 5009256 5010881 R PFAM: glycoside hydrolase, family 18; Carbohydrate binding family 6; SMART: cellulose binding, type IV; chitinase II; glycoside hydrolase complement(5009256..5010881) Flavobacterium johnsoniae UW101 5093805 YP_001196503.1 CDS Fjoh_4176 NC_009441.1 5011062 5013716 R PFAM: Ricin B lectin; Carbohydrate binding family 6; SMART: beta and gamma crystallin; cellulose binding, type IV; carbohydrate-binding family 6 protein complement(5011062..5013716) Flavobacterium johnsoniae UW101 5093806 YP_001196504.2 CDS Fjoh_4177 NC_009441.1 5013889 5017839 R PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase, family 16; glycoside hydrolase complement(5013889..5017839) Flavobacterium johnsoniae UW101 5093807 YP_001196505.1 CDS Fjoh_4178 NC_009441.1 5018276 5021206 R PFAM: Two component regulator propeller; Two component regulator three Y domain protein; SMART: regulatory protein, LuxR; periplasmic ligand-binding sensor protein complement(5018276..5021206) Flavobacterium johnsoniae UW101 5093808 YP_001196506.1 CDS Fjoh_4179 NC_009441.1 5021823 5022638 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 5021823..5022638 Flavobacterium johnsoniae UW101 5093809 YP_001196507.1 CDS Fjoh_4180 NC_009441.1 5022729 5023025 D acetyltransferase-like protein 5022729..5023025 Flavobacterium johnsoniae UW101 5093810 YP_001196508.1 CDS Fjoh_4181 NC_009441.1 5023039 5023659 D PFAM: phospholipase/Carboxylesterase; phospholipase/carboxylesterase 5023039..5023659 Flavobacterium johnsoniae UW101 5093811 YP_001196509.1 CDS Fjoh_4182 NC_009441.1 5023659 5024009 D hypothetical protein 5023659..5024009 Flavobacterium johnsoniae UW101 5093812 YP_001196510.1 CDS Fjoh_4183 NC_009441.1 5024263 5025201 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5024263..5025201 Flavobacterium johnsoniae UW101 5093813 YP_001196511.1 CDS Fjoh_4184 NC_009441.1 5025277 5025915 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(5025277..5025915) Flavobacterium johnsoniae UW101 5093814 YP_001196512.1 CDS Fjoh_4185 NC_009441.1 5026010 5026474 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(5026010..5026474) Flavobacterium johnsoniae UW101 5093815 YP_001196513.1 CDS Fjoh_4186 NC_009441.1 5026540 5027460 R hypothetical protein complement(5026540..5027460) Flavobacterium johnsoniae UW101 5093816 YP_001196514.1 CDS Fjoh_4187 NC_009441.1 5027647 5028816 D hypothetical protein 5027647..5028816 Flavobacterium johnsoniae UW101 5093817 YP_001196515.1 CDS Fjoh_4188 NC_009441.1 5028913 5029911 R SMART: regulatory protein, LacI; regulatory protein LacI complement(5028913..5029911) Flavobacterium johnsoniae UW101 5093818 YP_001196516.1 CDS Fjoh_4189 NC_009441.1 5030147 5030596 D PFAM: conserved hypothetical protein 22; hypothetical protein 5030147..5030596 Flavobacterium johnsoniae UW101 5093819 YP_001196517.1 CDS Fjoh_4190 NC_009441.1 5030678 5031490 D Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase 5030678..5031490 Flavobacterium johnsoniae UW101 5093820 YP_001196518.1 CDS Fjoh_4191 NC_009441.1 5031521 5032705 D TIGRFAM: mannonate dehydratase; PFAM: Mannonate dehydratase; mannonate dehydratase 5031521..5032705 Flavobacterium johnsoniae UW101 5093821 YP_001196519.1 CDS Fjoh_4192 NC_009441.1 5032848 5034482 D hypothetical protein 5032848..5034482 Flavobacterium johnsoniae UW101 5093822 YP_001196520.1 CDS Fjoh_4193 NC_009441.1 5034626 5038828 D PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase 5034626..5038828 Flavobacterium johnsoniae UW101 5093823 YP_001196521.1 CDS Fjoh_4194 NC_009441.1 5039044 5042046 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 5039044..5042046 Flavobacterium johnsoniae UW101 5093824 YP_001196522.1 CDS Fjoh_4195 NC_009441.1 5042062 5043582 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5042062..5043582 Flavobacterium johnsoniae UW101 5093825 YP_001196523.1 CDS Fjoh_4196 NC_009441.1 5043852 5045042 D PFAM: glycosyl hydrolase, family 88; glycosyl hydrolase 5043852..5045042 Flavobacterium johnsoniae UW101 5093826 YP_001196524.1 CDS Fjoh_4197 NC_009441.1 5045116 5047527 D PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase 5045116..5047527 Flavobacterium johnsoniae UW101 5093827 YP_001196525.1 CDS Fjoh_4198 NC_009441.1 5047727 5049523 D PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase 5047727..5049523 Flavobacterium johnsoniae UW101 5093828 YP_001196526.1 CDS Fjoh_4199 NC_009441.1 5049679 5050242 D hypothetical protein 5049679..5050242 Flavobacterium johnsoniae UW101 5093829 YP_001196527.1 CDS Fjoh_4200 NC_009441.1 5050399 5052600 R PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase complement(5050399..5052600) Flavobacterium johnsoniae UW101 5093830 YP_001196528.1 CDS Fjoh_4201 NC_009441.1 5052609 5053589 R PFAM: molybdopterin dehydrogenase, FAD-binding; molybdopterin dehydrogenase complement(5052609..5053589) Flavobacterium johnsoniae UW101 5093831 YP_001196529.1 CDS Fjoh_4202 NC_009441.1 5053586 5054308 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(5053586..5054308) Flavobacterium johnsoniae UW101 5093832 YP_001196530.1 CDS Fjoh_4203 NC_009441.1 5054558 5055706 D PFAM: aminotransferase, class V; class V aminotransferase 5054558..5055706 Flavobacterium johnsoniae UW101 5093833 YP_001196531.1 CDS Fjoh_4204 NC_009441.1 5055754 5056368 R MobA-like protein complement(5055754..5056368) Flavobacterium johnsoniae UW101 5093834 YP_001196532.1 CDS Fjoh_4205 NC_009441.1 5056346 5057485 R PFAM: protein of unknown function DUF182; alanine dehydrogenase complement(5056346..5057485) Flavobacterium johnsoniae UW101 5093835 YP_001196533.1 CDS Fjoh_4206 NC_009441.1 5057598 5058083 R hypothetical protein complement(5057598..5058083) Flavobacterium johnsoniae UW101 5093836 YP_001196534.1 CDS Fjoh_4207 NC_009441.1 5058273 5058605 D PFAM: protein of unknown function DUF1508; hypothetical protein 5058273..5058605 Flavobacterium johnsoniae UW101 5093837 YP_001196535.1 CDS Fjoh_4208 NC_009441.1 5058648 5059037 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(5058648..5059037) Flavobacterium johnsoniae UW101 5093838 YP_001196536.1 CDS Fjoh_4209 NC_009441.1 5059235 5059678 R hypothetical protein complement(5059235..5059678) Flavobacterium johnsoniae UW101 5093839 YP_001196537.1 CDS Fjoh_4210 NC_009441.1 5059990 5060577 R PFAM: protein of unknown function DUF162; hypothetical protein complement(5059990..5060577) Flavobacterium johnsoniae UW101 5093840 YP_001196538.1 CDS Fjoh_4211 NC_009441.1 5060567 5061970 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(5060567..5061970) Flavobacterium johnsoniae UW101 5093841 YP_001196539.1 CDS Fjoh_4212 NC_009441.1 5062136 5062876 R PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(5062136..5062876) Flavobacterium johnsoniae UW101 5093842 YP_001196540.1 CDS Fjoh_4213 NC_009441.1 5062975 5064336 R PFAM: carbohydrate kinase, FGGY; carbohydrate kinase complement(5062975..5064336) Flavobacterium johnsoniae UW101 5093843 YP_001196541.1 CDS Fjoh_4214 NC_009441.1 5064423 5065697 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(5064423..5065697) Flavobacterium johnsoniae UW101 5093844 YP_001196542.1 CDS Fjoh_4215 NC_009441.1 5066012 5068153 R TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(5066012..5068153) Flavobacterium johnsoniae UW101 5093845 YP_001196543.1 CDS Fjoh_4216 NC_009441.1 5068181 5069230 R transports L-rhamnose and L-lyxose into the cell; rhamnose-proton symporter complement(5068181..5069230) Flavobacterium johnsoniae UW101 5093846 YP_001196544.1 CDS Fjoh_4217 NC_009441.1 5069624 5070664 D PFAM: regulatory protein GntR, HTH; regulatory protein GntR 5069624..5070664 Flavobacterium johnsoniae UW101 5093847 YP_001196545.1 CDS Fjoh_4218 NC_009441.1 5070937 5072340 D PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; hypothetical protein 5070937..5072340 Flavobacterium johnsoniae UW101 5093848 YP_001196546.1 CDS Fjoh_4219 NC_009441.1 5072403 5073590 R PFAM: beta-lactamase; beta-lactamase complement(5072403..5073590) Flavobacterium johnsoniae UW101 5093849 YP_001196547.1 CDS Fjoh_4220 NC_009441.1 5073826 5074581 D PFAM: regulatory protein, LuxR; response regulator receiver protein 5073826..5074581 Flavobacterium johnsoniae UW101 5092262 YP_001196548.1 CDS Fjoh_4221 NC_009441.1 5074699 5077086 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor complement(5074699..5077086) Flavobacterium johnsoniae UW101 5092263 YP_001196549.1 CDS Fjoh_4222 NC_009441.1 5077340 5079190 R PFAM: FG-GAP repeat protein; FG-GAP repeat-containing protein complement(5077340..5079190) Flavobacterium johnsoniae UW101 5092264 YP_001196550.1 CDS Fjoh_4223 NC_009441.1 5079345 5081471 R hypothetical protein complement(5079345..5081471) Flavobacterium johnsoniae UW101 5092265 YP_001196551.1 CDS Fjoh_4224 NC_009441.1 5081688 5085098 R hypothetical protein complement(5081688..5085098) Flavobacterium johnsoniae UW101 5092266 YP_001196552.1 CDS Fjoh_4225 NC_009441.1 5085429 5088284 D PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase 5085429..5088284 Flavobacterium johnsoniae UW101 5092267 YP_001196553.1 CDS Fjoh_4226 NC_009441.1 5088463 5089938 D PFAM: lipolytic enzyme, G-D-S-L family; GDSL family lipase 5088463..5089938 Flavobacterium johnsoniae UW101 5092268 YP_001196554.1 CDS Fjoh_4227 NC_009441.1 5090118 5090294 R hypothetical protein complement(5090118..5090294) Flavobacterium johnsoniae UW101 5092269 YP_001196555.1 CDS Fjoh_4228 NC_009441.1 5090602 5091930 R PFAM: glycoside hydrolase, family 28; glycoside hydrolase complement(5090602..5091930) Flavobacterium johnsoniae UW101 5092270 YP_001196556.1 CDS Fjoh_4229 NC_009441.1 5092012 5093301 R hypothetical protein complement(5092012..5093301) Flavobacterium johnsoniae UW101 5092271 YP_001196557.1 CDS Fjoh_4230 NC_009441.1 5093339 5093662 R TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; L-rhamnose 1-epimerase complement(5093339..5093662) Flavobacterium johnsoniae UW101 5092272 YP_001196558.1 CDS Fjoh_4231 NC_009441.1 5093673 5094779 R hypothetical protein complement(5093673..5094779) Flavobacterium johnsoniae UW101 5092273 YP_001196559.1 CDS Fjoh_4232 NC_009441.1 5094887 5096422 R PFAM: protein of unknown function DUF303, acetylesterase; sialate O-acetylesterase complement(5094887..5096422) Flavobacterium johnsoniae UW101 5092274 YP_001196560.1 CDS Fjoh_4233 NC_009441.1 5096575 5098110 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5096575..5098110) Flavobacterium johnsoniae UW101 5092275 YP_001196561.1 CDS Fjoh_4234 NC_009441.1 5098117 5101260 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5098117..5101260) Flavobacterium johnsoniae UW101 5092276 YP_001196562.1 CDS Fjoh_4235 NC_009441.1 5101704 5104499 D PFAM: glycoside hydrolase family 2, sugar binding; glycoside hydrolase 5101704..5104499 Flavobacterium johnsoniae UW101 5092277 YP_001196563.1 CDS Fjoh_4236 NC_009441.1 5104517 5105641 D PFAM: glycosyl hydrolase, family 88; glycosyl hydrolase 5104517..5105641 Flavobacterium johnsoniae UW101 5092278 YP_001196564.1 CDS Fjoh_4237 NC_009441.1 5105708 5106328 R hypothetical protein complement(5105708..5106328) Flavobacterium johnsoniae UW101 5092279 YP_001196565.1 CDS Fjoh_4238 NC_009441.1 5106360 5106833 R hypothetical protein complement(5106360..5106833) Flavobacterium johnsoniae UW101 5092280 YP_001196566.1 CDS Fjoh_4239 NC_009441.1 5106850 5107182 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(5106850..5107182) Flavobacterium johnsoniae UW101 5092281 YP_001196567.1 CDS Fjoh_4240 NC_009441.1 5107523 5109145 R PFAM: Patatin; patatin complement(5107523..5109145) Flavobacterium johnsoniae UW101 5092282 YP_001196568.1 CDS Fjoh_4241 NC_009441.1 5109435 5110265 R hypothetical protein complement(5109435..5110265) Flavobacterium johnsoniae UW101 5092283 YP_001196569.1 CDS Fjoh_4242 NC_009441.1 5110777 5113488 D hypothetical protein 5110777..5113488 Flavobacterium johnsoniae UW101 5092284 YP_001196570.1 CDS Fjoh_4243 NC_009441.1 5113623 5115584 D PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; GAF sensor hybrid histidine kinase 5113623..5115584 Flavobacterium johnsoniae UW101 5092285 YP_001196571.1 CDS Fjoh_4244 NC_009441.1 5115651 5117009 R PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase complement(5115651..5117009) Flavobacterium johnsoniae UW101 5092286 YP_001196572.1 CDS Fjoh_4245 NC_009441.1 5117109 5118275 R hypothetical protein complement(5117109..5118275) Flavobacterium johnsoniae UW101 5092287 YP_001196573.1 CDS Fjoh_4246 NC_009441.1 5124512 5125168 R PFAM: lipolytic enzyme, G-D-S-L family; GDSL family lipase complement(5124512..5125168) Flavobacterium johnsoniae UW101 5092513 YP_001196574.1 CDS Fjoh_4247 NC_009441.1 5125269 5126615 R PFAM: glycoside hydrolase, family 28; glycoside hydrolase complement(5125269..5126615) Flavobacterium johnsoniae UW101 5092289 YP_001196575.1 CDS Fjoh_4248 NC_009441.1 5126741 5128741 R TIGRFAM: pectate lyase; PFAM: Pectinesterase; pectate lyase complement(5126741..5128741) Flavobacterium johnsoniae UW101 5092290 YP_001196576.1 CDS Fjoh_4249 NC_009441.1 5128751 5130349 R PFAM: glycoside hydrolase, family 43; glycoside hydrolase complement(5128751..5130349) Flavobacterium johnsoniae UW101 5092291 YP_001196577.1 CDS Fjoh_4250 NC_009441.1 5130520 5131713 R PFAM: glycosyl hydrolase, family 88; glycosyl hydrolase complement(5130520..5131713) Flavobacterium johnsoniae UW101 5092292 YP_001196578.1 CDS Fjoh_4251 NC_009441.1 5131763 5132968 R PFAM: glycosyl hydrolase, family 88; glycosyl hydrolase complement(5131763..5132968) Flavobacterium johnsoniae UW101 5092293 YP_001196579.1 CDS Fjoh_4252 NC_009441.1 5132981 5134180 R PFAM: glycosyl hydrolase, family 88; glycosyl hydrolase complement(5132981..5134180) Flavobacterium johnsoniae UW101 5092294 YP_001196580.1 CDS Fjoh_4253 NC_009441.1 5134222 5135178 R esterase/lipase-like protein complement(5134222..5135178) Flavobacterium johnsoniae UW101 5092295 YP_001196581.1 CDS Fjoh_4254 NC_009441.1 5135283 5136956 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5135283..5136956) Flavobacterium johnsoniae UW101 5092296 YP_001196582.1 CDS Fjoh_4255 NC_009441.1 5136969 5140073 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5136969..5140073) Flavobacterium johnsoniae UW101 5092297 YP_001196583.1 CDS Fjoh_4256 NC_009441.1 5140119 5141546 R PFAM: glycoside hydrolase, family 28; glycoside hydrolase complement(5140119..5141546) Flavobacterium johnsoniae UW101 5092298 YP_001196584.1 CDS Fjoh_4257 NC_009441.1 5141837 5142865 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 5141837..5142865 Flavobacterium johnsoniae UW101 5092299 YP_001196585.1 CDS Fjoh_4258 NC_009441.1 5143106 5144728 R PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; altronate dehydratase complement(5143106..5144728) Flavobacterium johnsoniae UW101 5092300 YP_001196586.1 CDS Fjoh_4259 NC_009441.1 5144767 5146215 R catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase complement(5144767..5146215) Flavobacterium johnsoniae UW101 5092301 YP_001196587.1 CDS Fjoh_4260 NC_009441.1 5146425 5147093 R catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase complement(5146425..5147093) Flavobacterium johnsoniae UW101 5092302 YP_001196588.1 CDS Fjoh_4261 NC_009441.1 5147106 5148152 R PFAM: PfkB domain protein; ribokinase-like domain-containing protein complement(5147106..5148152) Flavobacterium johnsoniae UW101 5092303 YP_001196589.1 CDS Fjoh_4262 NC_009441.1 5148306 5149709 R PFAM: Glucuronate isomerase; glucuronate isomerase complement(5148306..5149709) Flavobacterium johnsoniae UW101 5092304 YP_001196590.1 CDS Fjoh_4263 NC_009441.1 5149734 5150525 R Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase complement(5149734..5150525) Flavobacterium johnsoniae UW101 5092305 YP_001196591.1 CDS Fjoh_4264 NC_009441.1 5150530 5151369 R 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase complement(5150530..5151369) Flavobacterium johnsoniae UW101 5092306 YP_001196592.1 CDS Fjoh_4265 NC_009441.1 5151468 5152937 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(5151468..5152937) Flavobacterium johnsoniae UW101 5092307 YP_001196593.1 CDS Fjoh_4266 NC_009441.1 5153334 5154263 D esterase/lipase-like protein 5153334..5154263 Flavobacterium johnsoniae UW101 5092308 YP_001196594.1 CDS Fjoh_4267 NC_009441.1 5154350 5155798 R PFAM: PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein complement(5154350..5155798) Flavobacterium johnsoniae UW101 5092309 YP_001196595.1 CDS Fjoh_4268 NC_009441.1 5155872 5157110 R hypothetical protein complement(5155872..5157110) Flavobacterium johnsoniae UW101 5092310 YP_001196596.1 CDS Fjoh_4269 NC_009441.1 5157133 5159526 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5157133..5159526) Flavobacterium johnsoniae UW101 5092311 YP_001196597.1 CDS Fjoh_4270 NC_009441.1 5159634 5160665 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 5159634..5160665 Flavobacterium johnsoniae UW101 5092312 YP_001196598.1 CDS Fjoh_4271 NC_009441.1 5160735 5160983 D hypothetical protein 5160735..5160983 Flavobacterium johnsoniae UW101 5092313 YP_001196599.1 CDS Fjoh_4272 NC_009441.1 5161762 5162076 D hypothetical protein 5161762..5162076 Flavobacterium johnsoniae UW101 5092314 YP_001196600.1 CDS Fjoh_4273 NC_009441.1 5162304 5162993 D PFAM: isochorismatase hydrolase; isochorismatase hydrolase 5162304..5162993 Flavobacterium johnsoniae UW101 5092315 YP_001196601.1 CDS Fjoh_4274 NC_009441.1 5163207 5164994 D PFAM: Amidohydrolase 3; amidohydrolase 3 5163207..5164994 Flavobacterium johnsoniae UW101 5092316 YP_001196602.1 CDS Fjoh_4275 NC_009441.1 5165001 5166368 D hypothetical protein 5165001..5166368 Flavobacterium johnsoniae UW101 5092317 YP_001196603.1 CDS Fjoh_4276 NC_009441.1 5166704 5167261 D PFAM: 2',5' RNA ligase; 2'-5' RNA ligase 5166704..5167261 Flavobacterium johnsoniae UW101 5090612 YP_001196604.1 CDS Fjoh_4277 NC_009441.1 5167442 5168359 D hypothetical protein 5167442..5168359 Flavobacterium johnsoniae UW101 5090613 YP_001196605.1 CDS Fjoh_4278 NC_009441.1 5168483 5169406 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 5168483..5169406 Flavobacterium johnsoniae UW101 5090614 YP_001196606.1 CDS Fjoh_4279 NC_009441.1 5169709 5170434 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5169709..5170434 Flavobacterium johnsoniae UW101 5090615 YP_001196607.1 CDS Fjoh_4280 NC_009441.1 5170728 5171492 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5170728..5171492 Flavobacterium johnsoniae UW101 5090616 YP_001196608.1 CDS Fjoh_4281 NC_009441.1 5171726 5172184 R hypothetical protein complement(5171726..5172184) Flavobacterium johnsoniae UW101 5090617 YP_001196609.1 CDS Fjoh_4282 NC_009441.1 5172276 5172974 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(5172276..5172974) Flavobacterium johnsoniae UW101 5090618 YP_001196610.1 CDS Fjoh_4283 NC_009441.1 5172961 5174010 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(5172961..5174010) Flavobacterium johnsoniae UW101 5090619 YP_001196611.1 CDS Fjoh_4284 NC_009441.1 5174116 5175558 D hypothetical protein 5174116..5175558 Flavobacterium johnsoniae UW101 5090620 YP_001196612.1 CDS Fjoh_4285 NC_009441.1 5175571 5178858 D PFAM: acriflavin resistance protein; acriflavin resistance protein 5175571..5178858 Flavobacterium johnsoniae UW101 5090621 YP_001196613.1 CDS Fjoh_4286 NC_009441.1 5178967 5180052 D TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 5178967..5180052 Flavobacterium johnsoniae UW101 5090622 YP_001196614.1 CDS Fjoh_4287 NC_009441.1 5180378 5181196 D hypothetical protein 5180378..5181196 Flavobacterium johnsoniae UW101 5090623 YP_001196615.1 CDS Fjoh_4288 NC_009441.1 5181247 5181984 D hypothetical protein 5181247..5181984 Flavobacterium johnsoniae UW101 5090624 YP_001196616.1 CDS Fjoh_4289 NC_009441.1 5182064 5182297 R hypothetical protein complement(5182064..5182297) Flavobacterium johnsoniae UW101 5090625 YP_001196617.1 CDS Fjoh_4290 NC_009441.1 5182819 5183367 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; PfpI family intracellular peptidase complement(5182819..5183367) Flavobacterium johnsoniae UW101 5090626 YP_001196618.1 CDS Fjoh_4291 NC_009441.1 5183959 5184630 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 5183959..5184630 Flavobacterium johnsoniae UW101 5090627 YP_001196619.1 CDS Fjoh_4292 NC_009441.1 5184633 5185988 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 5184633..5185988 Flavobacterium johnsoniae UW101 5090628 YP_001196620.1 CDS Fjoh_4293 NC_009441.1 5186133 5187371 D PFAM: outer membrane efflux protein; outer membrane efflux protein 5186133..5187371 Flavobacterium johnsoniae UW101 5090629 YP_001196621.1 CDS Fjoh_4294 NC_009441.1 5187400 5188485 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 5187400..5188485 Flavobacterium johnsoniae UW101 5090630 YP_001196622.1 CDS Fjoh_4295 NC_009441.1 5188520 5191624 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux protein 5188520..5191624 Flavobacterium johnsoniae UW101 5090631 YP_001196623.1 CDS Fjoh_4296 NC_009441.1 5191757 5192203 D hypothetical protein 5191757..5192203 Flavobacterium johnsoniae UW101 5090632 YP_001196624.1 CDS Fjoh_4297 NC_009441.1 5192184 5192618 R PFAM: protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; cupin 2 domain-containing protein complement(5192184..5192618) Flavobacterium johnsoniae UW101 5090633 YP_001196625.1 CDS Fjoh_4298 NC_009441.1 5193827 5194420 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 5193827..5194420 Flavobacterium johnsoniae UW101 5090634 YP_001196626.1 CDS Fjoh_4299 NC_009441.1 5194669 5195886 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 5194669..5195886 Flavobacterium johnsoniae UW101 5090635 YP_001196627.1 CDS Fjoh_4300 NC_009441.1 5195899 5199063 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 5195899..5199063 Flavobacterium johnsoniae UW101 5090636 YP_001196628.1 CDS Fjoh_4301 NC_009441.1 5199399 5200817 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 5199399..5200817 Flavobacterium johnsoniae UW101 5090637 YP_001196629.1 CDS Fjoh_4302 NC_009441.1 5201097 5201558 D hypothetical protein 5201097..5201558 Flavobacterium johnsoniae UW101 5090638 YP_001196630.1 CDS Fjoh_4303 NC_009441.1 5201905 5202510 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 5201905..5202510 Flavobacterium johnsoniae UW101 5090639 YP_001196631.1 CDS Fjoh_4304 NC_009441.1 5202584 5203315 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5202584..5203315 Flavobacterium johnsoniae UW101 5090640 YP_001196632.1 CDS Fjoh_4305 NC_009441.1 5203523 5203903 D hypothetical protein 5203523..5203903 Flavobacterium johnsoniae UW101 5090641 YP_001196633.1 CDS Fjoh_4306 NC_009441.1 5203915 5204124 D hypothetical protein 5203915..5204124 Flavobacterium johnsoniae UW101 5090642 YP_001196634.1 CDS Fjoh_4307 NC_009441.1 5204202 5204576 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5204202..5204576 Flavobacterium johnsoniae UW101 5090643 YP_001196635.1 CDS Fjoh_4308 NC_009441.1 5204596 5205105 D hypothetical protein 5204596..5205105 Flavobacterium johnsoniae UW101 5090644 YP_001196636.1 CDS Fjoh_4309 NC_009441.1 5205109 5205573 D hypothetical protein 5205109..5205573 Flavobacterium johnsoniae UW101 5090645 YP_001196637.1 CDS Fjoh_4310 NC_009441.1 5205639 5205800 R PFAM: protein of unknown function DUF1328; hypothetical protein complement(5205639..5205800) Flavobacterium johnsoniae UW101 5090646 YP_001196638.1 CDS Fjoh_4311 NC_009441.1 5206070 5207149 D PFAM: glycosidase, PH1107-related; PH1107-like glycosidase 5206070..5207149 Flavobacterium johnsoniae UW101 5090647 YP_001196639.1 CDS Fjoh_4312 NC_009441.1 5207130 5209400 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 5207130..5209400 Flavobacterium johnsoniae UW101 5090648 YP_001196640.1 CDS Fjoh_4313 NC_009441.1 5209596 5211398 D PFAM: beta-ketoacyl synthase; regulatory protein, TetR; TetR family transcriptional regulator 5209596..5211398 Flavobacterium johnsoniae UW101 5090649 YP_001196641.1 CDS Fjoh_4314 NC_009441.1 5211653 5212411 D PFAM: protein of unknown function DUF140; hypothetical protein 5211653..5212411 Flavobacterium johnsoniae UW101 5090650 YP_001196642.1 CDS Fjoh_4315 NC_009441.1 5212413 5213192 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5212413..5213192 Flavobacterium johnsoniae UW101 5090651 YP_001196643.1 CDS Fjoh_4316 NC_009441.1 5213219 5214058 D PFAM: Mammalian cell entry related domain protein; hypothetical protein 5213219..5214058 Flavobacterium johnsoniae UW101 5090652 YP_001196644.1 CDS Fjoh_4317 NC_009441.1 5214074 5216893 D PFAM: AsmA family protein; AsmA family protein 5214074..5216893 Flavobacterium johnsoniae UW101 5090653 YP_001196645.1 CDS Fjoh_4318 NC_009441.1 5216904 5217395 D PFAM: protein of unknown function DUF1452; hypothetical protein 5216904..5217395 Flavobacterium johnsoniae UW101 5090654 YP_001196646.1 CDS Fjoh_4319 NC_009441.1 5217392 5218591 D PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase 5217392..5218591 Flavobacterium johnsoniae UW101 5090655 YP_001196647.1 CDS Fjoh_4320 NC_009441.1 5218688 5219725 R PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; MarR family transcriptional regulator complement(5218688..5219725) Flavobacterium johnsoniae UW101 5090656 YP_001196648.1 CDS Fjoh_4321 NC_009441.1 5220100 5221173 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(5220100..5221173) Flavobacterium johnsoniae UW101 5090657 YP_001196649.1 CDS Fjoh_4322 NC_009441.1 5221307 5221789 D G:T/U mismatch-specific DNA glycosylase-like protein 5221307..5221789 Flavobacterium johnsoniae UW101 5090658 YP_001196650.1 CDS Fjoh_4323 NC_009441.1 5222114 5222548 D hypothetical protein 5222114..5222548 Flavobacterium johnsoniae UW101 5090659 YP_001196651.1 CDS Fjoh_4324 NC_009441.1 5222607 5223782 R hypothetical protein complement(5222607..5223782) Flavobacterium johnsoniae UW101 5090660 YP_001196652.1 CDS Fjoh_4325 NC_009441.1 5223994 5224908 D hypothetical protein 5223994..5224908 Flavobacterium johnsoniae UW101 5090661 YP_001196653.1 CDS Fjoh_4326 NC_009441.1 5225256 5227274 R hypothetical protein complement(5225256..5227274) Flavobacterium johnsoniae UW101 5090662 YP_001196654.1 CDS Fjoh_4327 NC_009441.1 5227300 5228544 R hypothetical protein complement(5227300..5228544) Flavobacterium johnsoniae UW101 5090663 YP_001196655.1 CDS Fjoh_4328 NC_009441.1 5228764 5230278 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5228764..5230278) Flavobacterium johnsoniae UW101 5090664 YP_001196656.1 CDS Fjoh_4329 NC_009441.1 5230303 5233320 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5230303..5233320) Flavobacterium johnsoniae UW101 5090665 YP_001196657.1 CDS Fjoh_4330 NC_009441.1 5233349 5234431 R hypothetical protein complement(5233349..5234431) Flavobacterium johnsoniae UW101 5090666 YP_001196658.1 CDS Fjoh_4331 NC_009441.1 5234440 5234961 R hypothetical protein complement(5234440..5234961) Flavobacterium johnsoniae UW101 5091600 YP_001196659.1 CDS Fjoh_4332 NC_009441.1 5235436 5237034 D hypothetical protein 5235436..5237034 Flavobacterium johnsoniae UW101 5091601 YP_001196660.1 CDS Fjoh_4333 NC_009441.1 5237271 5238494 R sterol desaturase-like protein complement(5237271..5238494) Flavobacterium johnsoniae UW101 5091602 YP_001196661.1 CDS Fjoh_4334 NC_009441.1 5238635 5239882 R PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase complement(5238635..5239882) Flavobacterium johnsoniae UW101 5091603 YP_001196662.1 CDS Fjoh_4335 NC_009441.1 5240356 5241210 R PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein complement(5240356..5241210) Flavobacterium johnsoniae UW101 5091604 YP_001196663.1 CDS Fjoh_4336 NC_009441.1 5241316 5242779 R Mg-chelatase subunit ChlI-like protein complement(5241316..5242779) Flavobacterium johnsoniae UW101 5091605 YP_001196664.1 CDS Fjoh_4337 NC_009441.1 5242931 5244049 R von Willebrand factor A complement(5242931..5244049) Flavobacterium johnsoniae UW101 5091606 YP_001196665.1 CDS Fjoh_4338 NC_009441.1 5244156 5244536 R hypothetical protein complement(5244156..5244536) Flavobacterium johnsoniae UW101 5091607 YP_001196666.1 CDS Fjoh_4339 NC_009441.1 5244526 5244807 R hypothetical protein complement(5244526..5244807) Flavobacterium johnsoniae UW101 5091608 YP_001196667.1 CDS Fjoh_4340 NC_009441.1 5244976 5245530 R hypothetical protein complement(5244976..5245530) Flavobacterium johnsoniae UW101 5091609 YP_001196668.1 CDS Fjoh_4341 NC_009441.1 5245615 5245863 D hypothetical protein 5245615..5245863 Flavobacterium johnsoniae UW101 5091610 YP_001196669.1 CDS Fjoh_4342 NC_009441.1 5246067 5246507 D PFAM: heat shock protein DnaJ domain protein; molecular chaperone DnaJ 5246067..5246507 Flavobacterium johnsoniae UW101 5091611 YP_001196670.1 CDS Fjoh_4343 NC_009441.1 5246767 5247528 D hypothetical protein 5246767..5247528 Flavobacterium johnsoniae UW101 5091612 YP_001196671.1 CDS Fjoh_4345 NC_009441.1 5248791 5250098 D PFAM: phage integrase; phage integrase 5248791..5250098 Flavobacterium johnsoniae UW101 5092515 YP_001196672.1 CDS Fjoh_4346 NC_009441.1 5250416 5250670 R hypothetical protein complement(5250416..5250670) Flavobacterium johnsoniae UW101 5091614 YP_001196673.1 CDS Fjoh_4347 NC_009441.1 5251882 5252157 R hypothetical protein complement(5251882..5252157) Flavobacterium johnsoniae UW101 5091615 YP_001196674.1 CDS Fjoh_4348 NC_009441.1 5252193 5252495 R hypothetical protein complement(5252193..5252495) Flavobacterium johnsoniae UW101 5091616 YP_001196675.1 CDS Fjoh_4349 NC_009441.1 5252501 5253652 R hypothetical protein complement(5252501..5253652) Flavobacterium johnsoniae UW101 5091617 YP_001196676.1 CDS Fjoh_4350 NC_009441.1 5253668 5254531 R hypothetical protein complement(5253668..5254531) Flavobacterium johnsoniae UW101 5091618 YP_001196677.1 CDS Fjoh_4351 NC_009441.1 5254544 5255833 R hypothetical protein complement(5254544..5255833) Flavobacterium johnsoniae UW101 5091619 YP_001196678.1 CDS Fjoh_4352 NC_009441.1 5256096 5256659 R hypothetical protein complement(5256096..5256659) Flavobacterium johnsoniae UW101 5091620 YP_001196679.1 CDS Fjoh_4353 NC_009441.1 5256729 5257940 R PFAM: TraJ family protein conjugative transposon; TraJ family protein conjugative transposon complement(5256729..5257940) Flavobacterium johnsoniae UW101 5091621 YP_001196680.1 CDS Fjoh_4354 NC_009441.1 5257944 5258579 R hypothetical protein complement(5257944..5258579) Flavobacterium johnsoniae UW101 5091622 YP_001196681.1 CDS Fjoh_4355 NC_009441.1 5258591 5259205 R hypothetical protein complement(5258591..5259205) Flavobacterium johnsoniae UW101 5091623 YP_001196682.1 CDS Fjoh_4356 NC_009441.1 5259221 5259904 R hypothetical protein complement(5259221..5259904) Flavobacterium johnsoniae UW101 5091624 YP_001196683.1 CDS Fjoh_4357 NC_009441.1 5259914 5262373 R Type IV secretory pathway VirB4 components-like protein complement(5259914..5262373) Flavobacterium johnsoniae UW101 5091625 YP_001196684.1 CDS Fjoh_4358 NC_009441.1 5262418 5262732 R hypothetical protein complement(5262418..5262732) Flavobacterium johnsoniae UW101 5091626 YP_001196685.1 CDS Fjoh_4359 NC_009441.1 5262745 5263083 R hypothetical protein complement(5262745..5263083) Flavobacterium johnsoniae UW101 5091627 YP_001196686.1 CDS Fjoh_4360 NC_009441.1 5263209 5263670 R hypothetical protein complement(5263209..5263670) Flavobacterium johnsoniae UW101 5091628 YP_001196687.1 CDS Fjoh_4361 NC_009441.1 5263869 5265062 R hypothetical protein complement(5263869..5265062) Flavobacterium johnsoniae UW101 5091629 YP_001196688.1 CDS Fjoh_4362 NC_009441.1 5265119 5265988 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(5265119..5265988) Flavobacterium johnsoniae UW101 5091630 YP_001196689.1 CDS Fjoh_4363 NC_009441.1 5266326 5266931 R hypothetical protein complement(5266326..5266931) Flavobacterium johnsoniae UW101 5091631 YP_001196690.1 CDS Fjoh_4364 NC_009441.1 5267264 5268937 D PFAM: helix-turn-helix- domain containing protein, AraC type; SMART: Tetratricopeptide domain protein; helix-turn-helix domain-containing protein 5267264..5268937 Flavobacterium johnsoniae UW101 5091632 YP_001196691.1 CDS Fjoh_4365 NC_009441.1 5269016 5269192 D hypothetical protein 5269016..5269192 Flavobacterium johnsoniae UW101 5091633 YP_001196692.1 CDS Fjoh_4366 NC_009441.1 5269564 5270205 R hypothetical protein complement(5269564..5270205) Flavobacterium johnsoniae UW101 5091634 YP_001196693.1 CDS Fjoh_4367 NC_009441.1 5270202 5271119 R hypothetical protein complement(5270202..5271119) Flavobacterium johnsoniae UW101 5091635 YP_001196694.1 CDS Fjoh_4368 NC_009441.1 5271221 5271511 R hypothetical protein complement(5271221..5271511) Flavobacterium johnsoniae UW101 5091636 YP_001196695.1 CDS Fjoh_4369 NC_009441.1 5271895 5273124 D hypothetical protein 5271895..5273124 Flavobacterium johnsoniae UW101 5091637 YP_001196696.1 CDS Fjoh_4370 NC_009441.1 5273324 5274121 R hypothetical protein complement(5273324..5274121) Flavobacterium johnsoniae UW101 5091638 YP_001196697.1 CDS Fjoh_4371 NC_009441.1 5274125 5274637 R hypothetical protein complement(5274125..5274637) Flavobacterium johnsoniae UW101 5091639 YP_001196698.1 CDS Fjoh_4372 NC_009441.1 5274970 5275233 R PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(5274970..5275233) Flavobacterium johnsoniae UW101 5091640 YP_001196699.1 CDS Fjoh_4373 NC_009441.1 5276194 5279223 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 5276194..5279223 Flavobacterium johnsoniae UW101 5091641 YP_001196700.1 CDS Fjoh_4374 NC_009441.1 5279241 5280656 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5279241..5280656 Flavobacterium johnsoniae UW101 5091642 YP_001196701.1 CDS Fjoh_4375 NC_009441.1 5280736 5283273 D PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 5280736..5283273 Flavobacterium johnsoniae UW101 5091643 YP_001196702.1 CDS Fjoh_4376 NC_009441.1 5283347 5283616 R hypothetical protein complement(5283347..5283616) Flavobacterium johnsoniae UW101 5091644 YP_001196703.1 CDS Fjoh_4377 NC_009441.1 5283715 5285193 R hypothetical protein complement(5283715..5285193) Flavobacterium johnsoniae UW101 5091645 YP_001196704.1 CDS Fjoh_4378 NC_009441.1 5285413 5285703 R hypothetical protein complement(5285413..5285703) Flavobacterium johnsoniae UW101 5091646 YP_001196705.1 CDS Fjoh_4379 NC_009441.1 5286105 5286497 D hypothetical protein 5286105..5286497 Flavobacterium johnsoniae UW101 5091647 YP_001196706.1 CDS Fjoh_4380 NC_009441.1 5286482 5287732 D PFAM: Relaxase/mobilization nuclease; relaxase/mobilization nuclease 5286482..5287732 Flavobacterium johnsoniae UW101 5091648 YP_001196707.1 CDS Fjoh_4381 NC_009441.1 5287751 5289739 D Type IV secretory pathway VirD4 components-like protein 5287751..5289739 Flavobacterium johnsoniae UW101 5091649 YP_001196708.1 CDS Fjoh_4382 NC_009441.1 5289790 5290122 R hypothetical protein complement(5289790..5290122) Flavobacterium johnsoniae UW101 5091650 YP_001196709.1 CDS Fjoh_4383 NC_009441.1 5290497 5290928 D PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein/primosomal replication protein n 5290497..5290928 Flavobacterium johnsoniae UW101 5091651 YP_001196710.1 CDS Fjoh_4384 NC_009441.1 5290967 5291326 D hypothetical protein 5290967..5291326 Flavobacterium johnsoniae UW101 5091652 YP_001196711.1 CDS Fjoh_4385 NC_009441.1 5291353 5291733 D hypothetical protein 5291353..5291733 Flavobacterium johnsoniae UW101 5091653 YP_001196712.1 CDS Fjoh_4386 NC_009441.1 5291730 5293046 D hypothetical protein 5291730..5293046 Flavobacterium johnsoniae UW101 5091654 YP_001196713.1 CDS Fjoh_4387 NC_009441.1 5293317 5293787 D PFAM: DNA repair protein RadC; DNA repair protein RadC 5293317..5293787 Flavobacterium johnsoniae UW101 5091655 YP_001196714.1 CDS Fjoh_4388 NC_009441.1 5293846 5294004 D hypothetical protein 5293846..5294004 Flavobacterium johnsoniae UW101 5093906 YP_001196715.1 CDS Fjoh_4389 NC_009441.1 5294182 5294529 D hypothetical protein 5294182..5294529 Flavobacterium johnsoniae UW101 5093907 YP_001196716.1 CDS Fjoh_4390 NC_009441.1 5295339 5296169 D transcriptional regulator-like protein 5295339..5296169 Flavobacterium johnsoniae UW101 5093908 YP_001196717.1 CDS Fjoh_4391 NC_009441.1 5296166 5296402 D hypothetical protein 5296166..5296402 Flavobacterium johnsoniae UW101 5093909 YP_001196718.1 CDS Fjoh_4392 NC_009441.1 5296723 5296992 D hypothetical protein 5296723..5296992 Flavobacterium johnsoniae UW101 5093910 YP_001196719.1 CDS Fjoh_4393 NC_009441.1 5297019 5298566 D TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; type I restriction-modification system, M subunit 5297019..5298566 Flavobacterium johnsoniae UW101 5093911 YP_001196720.1 CDS Fjoh_4394 NC_009441.1 5298563 5299807 D PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 5298563..5299807 Flavobacterium johnsoniae UW101 5093912 YP_001196721.1 CDS Fjoh_4395 NC_009441.1 5299812 5301044 D hypothetical protein 5299812..5301044 Flavobacterium johnsoniae UW101 5093913 YP_001196722.1 CDS Fjoh_4396 NC_009441.1 5301022 5304138 D TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease 5301022..5304138 Flavobacterium johnsoniae UW101 5093914 YP_001196723.1 CDS Fjoh_4397 NC_009441.1 5304168 5304608 D hypothetical protein 5304168..5304608 Flavobacterium johnsoniae UW101 5093915 YP_001196724.1 CDS Fjoh_4398 NC_009441.1 5304618 5305523 D hypothetical protein 5304618..5305523 Flavobacterium johnsoniae UW101 5093916 YP_001196725.1 CDS Fjoh_4399 NC_009441.1 5305523 5306548 D PFAM: ATP-binding region, ATPase domain protein domain protein; integral membrane sensor signal transduction histidine kinase 5305523..5306548 Flavobacterium johnsoniae UW101 5093917 YP_001196726.1 CDS Fjoh_4401 NC_009441.1 5307676 5308038 D hypothetical protein 5307676..5308038 Flavobacterium johnsoniae UW101 5092516 YP_001196727.1 CDS Fjoh_4402 NC_009441.1 5308463 5310259 D PFAM: CBS domain containing protein; Cl- channel, voltage-gated family protein; Cl- channel, voltage-gated family protein 5308463..5310259 Flavobacterium johnsoniae UW101 5093919 YP_001196728.1 CDS Fjoh_4403 NC_009441.1 5310465 5311517 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 5310465..5311517 Flavobacterium johnsoniae UW101 5093920 YP_001196729.1 CDS Fjoh_4404 NC_009441.1 5312000 5313310 D PFAM: Ubiquitin system component Cue; conserved hypothetical protein 341; hypothetical protein 5312000..5313310 Flavobacterium johnsoniae UW101 5093921 YP_001196730.1 CDS Fjoh_4405 NC_009441.1 5313337 5314563 R PFAM: Na+/H+ antiporter NhaA; sodium/hydrogen exchanger; Na+/H+ antiporter NhaA complement(5313337..5314563) Flavobacterium johnsoniae UW101 5093922 YP_001196731.1 CDS Fjoh_4406 NC_009441.1 5315027 5315416 D hypothetical protein 5315027..5315416 Flavobacterium johnsoniae UW101 5093923 YP_001196732.1 CDS Fjoh_4407 NC_009441.1 5315575 5316657 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 5315575..5316657 Flavobacterium johnsoniae UW101 5093924 YP_001196733.1 CDS Fjoh_4408 NC_009441.1 5316679 5319885 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 5316679..5319885 Flavobacterium johnsoniae UW101 5093925 YP_001196734.1 CDS Fjoh_4409 NC_009441.1 5319875 5321311 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 5319875..5321311 Flavobacterium johnsoniae UW101 5093926 YP_001196735.1 CDS Fjoh_4410 NC_009441.1 5321986 5322981 D PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5321986..5322981 Flavobacterium johnsoniae UW101 5093927 YP_001196736.1 CDS Fjoh_4411 NC_009441.1 5323012 5323830 D SMART: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 5323012..5323830 Flavobacterium johnsoniae UW101 5093928 YP_001196737.1 CDS Fjoh_4412 NC_009441.1 5324649 5325803 R PFAM: sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(5324649..5325803) Flavobacterium johnsoniae UW101 5093929 YP_001196738.1 CDS Fjoh_4413 NC_009441.1 5325873 5326325 R PFAM: heat shock protein Hsp20; heat shock protein Hsp20 complement(5325873..5326325) Flavobacterium johnsoniae UW101 5093930 YP_001196739.1 CDS Fjoh_4415 NC_009441.1 5327228 5328241 R PFAM: KWG Leptospira repeat protein; hypothetical protein complement(5327228..5328241) Flavobacterium johnsoniae UW101 5092517 YP_001196740.1 CDS Fjoh_4416 NC_009441.1 5328357 5329487 R TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; chromate transporter complement(5328357..5329487) Flavobacterium johnsoniae UW101 5093932 YP_001196741.1 CDS Fjoh_4418 NC_009441.1 5330180 5330596 D PFAM: regulatory protein, ArsR; regulatory protein ArsR 5330180..5330596 Flavobacterium johnsoniae UW101 5092518 YP_001196742.1 CDS Fjoh_4419 NC_009441.1 5330587 5331093 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5330587..5331093 Flavobacterium johnsoniae UW101 5093934 YP_001196743.1 CDS Fjoh_4420 NC_009441.1 5331127 5331600 D hypothetical protein 5331127..5331600 Flavobacterium johnsoniae UW101 5093935 YP_001196744.1 CDS Fjoh_4421 NC_009441.1 5331643 5332257 D protein tyrosine phosphatase 5331643..5332257 Flavobacterium johnsoniae UW101 5093936 YP_001196745.1 CDS Fjoh_4422 NC_009441.1 5332259 5333344 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 5332259..5333344 Flavobacterium johnsoniae UW101 5093937 YP_001196746.1 CDS Fjoh_4423 NC_009441.1 5333351 5334085 D PFAM: metallophosphoesterase; metallophosphoesterase 5333351..5334085 Flavobacterium johnsoniae UW101 5093938 YP_001196747.1 CDS Fjoh_4424 NC_009441.1 5334107 5334679 D PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein 5334107..5334679 Flavobacterium johnsoniae UW101 5093939 YP_001196748.1 CDS Fjoh_4425 NC_009441.1 5334753 5335316 D hypothetical protein 5334753..5335316 Flavobacterium johnsoniae UW101 5093940 YP_001196749.1 CDS Fjoh_4426 NC_009441.1 5335350 5335913 D PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 5335350..5335913 Flavobacterium johnsoniae UW101 5093941 YP_001196750.1 CDS Fjoh_4427 NC_009441.1 5336599 5336889 D PFAM: transposase IS3/IS911 family protein; CENP-B, N-terminal DNA-binding; transposase IS3/IS911 family protein 5336599..5336889 Flavobacterium johnsoniae UW101 5093942 YP_001196751.1 CDS Fjoh_4428 NC_009441.1 5337222 5339228 R PFAM: glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein; glycoside hydrolase complement(5337222..5339228) Flavobacterium johnsoniae UW101 5093943 YP_001196752.1 CDS Fjoh_4429 NC_009441.1 5339389 5341512 R hypothetical protein complement(5339389..5341512) Flavobacterium johnsoniae UW101 5093944 YP_001196753.1 CDS Fjoh_4430 NC_009441.1 5341530 5344040 R PFAM: glycoside hydrolase, family 31; alpha-glucosidase complement(5341530..5344040) Flavobacterium johnsoniae UW101 5093945 YP_001196754.1 CDS Fjoh_4431 NC_009441.1 5344175 5345935 R hypothetical protein complement(5344175..5345935) Flavobacterium johnsoniae UW101 5093946 YP_001196755.1 CDS Fjoh_4432 NC_009441.1 5345938 5347401 R hypothetical protein complement(5345938..5347401) Flavobacterium johnsoniae UW101 5093947 YP_001196756.1 CDS Fjoh_4433 NC_009441.1 5347414 5348898 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5347414..5348898) Flavobacterium johnsoniae UW101 5093948 YP_001196757.1 CDS Fjoh_4434 NC_009441.1 5348903 5351974 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5348903..5351974) Flavobacterium johnsoniae UW101 5093949 YP_001196758.1 CDS Fjoh_4435 NC_009441.1 5352449 5354149 R hypothetical protein complement(5352449..5354149) Flavobacterium johnsoniae UW101 5093950 YP_001196759.1 CDS Fjoh_4436 NC_009441.1 5354989 5358507 R PFAM: Ricin B lectin; glucan 1,6-alpha-isomaltosidase complement(5354989..5358507) Flavobacterium johnsoniae UW101 5093951 YP_001196760.1 CDS Fjoh_4437 NC_009441.1 5359272 5360171 D cation/multidrug efflux pump-like protein 5359272..5360171 Flavobacterium johnsoniae UW101 5093952 YP_001196761.1 CDS Fjoh_4438 NC_009441.1 5360549 5361316 D SMART: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 5360549..5361316 Flavobacterium johnsoniae UW101 5093953 YP_001196762.1 CDS Fjoh_4439 NC_009441.1 5361399 5361908 D hypothetical protein 5361399..5361908 Flavobacterium johnsoniae UW101 5093954 YP_001196763.1 CDS Fjoh_4440 NC_009441.1 5361908 5362612 D PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5361908..5362612 Flavobacterium johnsoniae UW101 5093955 YP_001196764.1 CDS Fjoh_4441 NC_009441.1 5362732 5363658 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 5362732..5363658 Flavobacterium johnsoniae UW101 5093956 YP_001196765.1 CDS Fjoh_4442 NC_009441.1 5363862 5364614 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 5363862..5364614 Flavobacterium johnsoniae UW101 5093957 YP_001196766.1 CDS Fjoh_4443 NC_009441.1 5364595 5365023 D hypothetical protein 5364595..5365023 Flavobacterium johnsoniae UW101 5093958 YP_001196767.1 CDS Fjoh_4444 NC_009441.1 5365167 5365907 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KR; short-chain dehydrogenase/reductase SDR 5365167..5365907 Flavobacterium johnsoniae UW101 5093959 YP_001196768.1 CDS Fjoh_4445 NC_009441.1 5365948 5366424 D hypothetical protein 5365948..5366424 Flavobacterium johnsoniae UW101 5093960 YP_001196769.1 CDS Fjoh_4446 NC_009441.1 5367120 5367848 R PFAM: protein of unknown function DUF1275; hypothetical protein complement(5367120..5367848) Flavobacterium johnsoniae UW101 5093961 YP_001196770.1 CDS Fjoh_4447 NC_009441.1 5368036 5368719 R PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator complement(5368036..5368719) Flavobacterium johnsoniae UW101 5091876 YP_001196771.1 CDS Fjoh_4449 NC_009441.1 5369432 5369647 D hypothetical protein 5369432..5369647 Flavobacterium johnsoniae UW101 5092519 YP_001196772.1 CDS Fjoh_4450 NC_009441.1 5369651 5370031 D TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein 5369651..5370031 Flavobacterium johnsoniae UW101 5091878 YP_001196773.1 CDS gcvT NC_009441.1 5370033 5371142 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 5370033..5371142 Flavobacterium johnsoniae UW101 5091879 YP_001196774.1 CDS Fjoh_4452 NC_009441.1 5371154 5371525 D PFAM: glycine cleavage H-protein; glycine cleavage H-protein 5371154..5371525 Flavobacterium johnsoniae UW101 5091880 YP_001196775.1 CDS Fjoh_4453 NC_009441.1 5371522 5372118 D hypothetical protein 5371522..5372118 Flavobacterium johnsoniae UW101 5091881 YP_001196776.1 CDS Fjoh_4454 NC_009441.1 5372318 5372728 R hypothetical protein complement(5372318..5372728) Flavobacterium johnsoniae UW101 5091882 YP_001196777.1 CDS Fjoh_4455 NC_009441.1 5373023 5373418 R hypothetical protein complement(5373023..5373418) Flavobacterium johnsoniae UW101 5091883 YP_001196778.1 CDS Fjoh_4456 NC_009441.1 5373495 5374073 R PFAM: PhnA protein-like; SMART: PhnA protein N-terminal, proteobacterial; PhnA protein-like protein complement(5373495..5374073) Flavobacterium johnsoniae UW101 5091884 YP_001196779.1 CDS Fjoh_4457 NC_009441.1 5374196 5374792 R hypothetical protein complement(5374196..5374792) Flavobacterium johnsoniae UW101 5091885 YP_001196780.1 CDS Fjoh_4458 NC_009441.1 5375028 5375282 R response regulator receiver protein complement(5375028..5375282) Flavobacterium johnsoniae UW101 5091886 YP_001196781.1 CDS Fjoh_4459 NC_009441.1 5375768 5376673 D PFAM: peptidase U61, LD-carboxypeptidase A; peptidase U61, LD-carboxypeptidase A 5375768..5376673 Flavobacterium johnsoniae UW101 5091887 YP_001196782.1 CDS Fjoh_4462 NC_009441.1 5378795 5383135 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; outer membrane efflux protein; CzcA family heavy metal efflux protein 5378795..5383135 Flavobacterium johnsoniae UW101 5092521 YP_001196783.1 CDS Fjoh_4463 NC_009441.1 5383142 5384317 D TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 5383142..5384317 Flavobacterium johnsoniae UW101 5091889 YP_001196784.1 CDS Fjoh_4464 NC_009441.1 5384307 5384681 D PFAM: diacylglycerol kinase; diacylglycerol kinase 5384307..5384681 Flavobacterium johnsoniae UW101 5091890 YP_001196785.1 CDS Fjoh_4465 NC_009441.1 5384695 5386665 D PFAM: sulfatase; sulfatase 5384695..5386665 Flavobacterium johnsoniae UW101 5091891 YP_001196786.1 CDS Fjoh_4466 NC_009441.1 5386736 5387176 D hypothetical protein 5386736..5387176 Flavobacterium johnsoniae UW101 5091892 YP_001196787.1 CDS Fjoh_4467 NC_009441.1 5387173 5388102 D PFAM: ApbE family lipoprotein; ApbE family lipoprotein 5387173..5388102 Flavobacterium johnsoniae UW101 5091893 YP_001196788.1 CDS Fjoh_4468 NC_009441.1 5388350 5389528 D hypothetical protein 5388350..5389528 Flavobacterium johnsoniae UW101 5091894 YP_001196789.1 CDS Fjoh_4469 NC_009441.1 5389530 5390285 D PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 5389530..5390285 Flavobacterium johnsoniae UW101 5091895 YP_001196790.1 CDS Fjoh_4470 NC_009441.1 5390289 5390864 D PFAM: cytochrome B561; cytochrome B561 5390289..5390864 Flavobacterium johnsoniae UW101 5091896 YP_001196791.1 CDS Fjoh_4471 NC_009441.1 5390897 5391586 D PFAM: protein of unknown function DUF125, transmembrane; hypothetical protein 5390897..5391586 Flavobacterium johnsoniae UW101 5091897 YP_001196792.1 CDS Fjoh_4472 NC_009441.1 5391665 5392267 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 5391665..5392267 Flavobacterium johnsoniae UW101 5091898 YP_001196793.1 CDS Fjoh_4473 NC_009441.1 5392356 5393198 D hypothetical protein 5392356..5393198 Flavobacterium johnsoniae UW101 5091899 YP_001196794.1 CDS Fjoh_4474 NC_009441.1 5393352 5395868 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase 5393352..5395868 Flavobacterium johnsoniae UW101 5091900 YP_001196795.1 CDS Fjoh_4475 NC_009441.1 5396104 5398389 R PFAM: helicase domain protein; helicase complement(5396104..5398389) Flavobacterium johnsoniae UW101 5091901 YP_001196796.1 CDS Fjoh_4476 NC_009441.1 5399136 5399879 R hypothetical protein complement(5399136..5399879) Flavobacterium johnsoniae UW101 5091902 YP_001196797.1 CDS Fjoh_4477 NC_009441.1 5399881 5400159 R hypothetical protein complement(5399881..5400159) Flavobacterium johnsoniae UW101 5091903 YP_001196798.1 CDS Fjoh_4478 NC_009441.1 5400931 5401452 D hypothetical protein 5400931..5401452 Flavobacterium johnsoniae UW101 5091904 YP_001196799.1 CDS Fjoh_4479 NC_009441.1 5401728 5403236 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 5401728..5403236 Flavobacterium johnsoniae UW101 5091905 YP_001196800.1 CDS Fjoh_4481 NC_009441.1 5403887 5404537 D PFAM: protein of unknown function DUF1349; hypothetical protein 5403887..5404537 Flavobacterium johnsoniae UW101 5092522 YP_001196801.1 CDS Fjoh_4482 NC_009441.1 5404635 5407745 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux protein complement(5404635..5407745) Flavobacterium johnsoniae UW101 5091907 YP_001196802.1 CDS Fjoh_4483 NC_009441.1 5407750 5408049 R PFAM: protein of unknown function DUF190; hypothetical protein complement(5407750..5408049) Flavobacterium johnsoniae UW101 5091908 YP_001196803.1 CDS Fjoh_4484 NC_009441.1 5408116 5409126 R TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(5408116..5409126) Flavobacterium johnsoniae UW101 5091909 YP_001196804.1 CDS Fjoh_4485 NC_009441.1 5409178 5410431 R PFAM: outer membrane efflux protein; outer membrane efflux protein complement(5409178..5410431) Flavobacterium johnsoniae UW101 5091910 YP_001196805.1 CDS Fjoh_4486 NC_009441.1 5410576 5411112 D hypothetical protein 5410576..5411112 Flavobacterium johnsoniae UW101 5091911 YP_001196806.1 CDS Fjoh_4487 NC_009441.1 5411257 5411889 D PFAM: nitroreductase; nitroreductase 5411257..5411889 Flavobacterium johnsoniae UW101 5091912 YP_001196807.1 CDS Fjoh_4488 NC_009441.1 5412279 5412875 D hypothetical protein 5412279..5412875 Flavobacterium johnsoniae UW101 5091913 YP_001196808.1 CDS Fjoh_4490 NC_009441.1 5413366 5415369 R hypothetical protein complement(5413366..5415369) Flavobacterium johnsoniae UW101 5092523 YP_001196809.1 CDS Fjoh_4491 NC_009441.1 5415382 5418771 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5415382..5418771) Flavobacterium johnsoniae UW101 5091915 YP_001196810.1 CDS Fjoh_4492 NC_009441.1 5419271 5420098 D hypothetical protein 5419271..5420098 Flavobacterium johnsoniae UW101 5091916 YP_001196811.1 CDS Fjoh_4493 NC_009441.1 5420153 5422528 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(5420153..5422528) Flavobacterium johnsoniae UW101 5091917 YP_001196812.1 CDS Fjoh_4494 NC_009441.1 5422614 5424299 D hypothetical protein 5422614..5424299 Flavobacterium johnsoniae UW101 5091918 YP_001196813.1 CDS Fjoh_4495 NC_009441.1 5424296 5424991 D PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 5424296..5424991 Flavobacterium johnsoniae UW101 5091919 YP_001196814.1 CDS Fjoh_4496 NC_009441.1 5425133 5425414 D hypothetical protein 5425133..5425414 Flavobacterium johnsoniae UW101 5091920 YP_001196815.1 CDS Fjoh_4497 NC_009441.1 5425512 5427050 R hypothetical protein complement(5425512..5427050) Flavobacterium johnsoniae UW101 5091921 YP_001196816.1 CDS Fjoh_4498 NC_009441.1 5427104 5428921 R hypothetical protein complement(5427104..5428921) Flavobacterium johnsoniae UW101 5091922 YP_001196817.1 CDS Fjoh_4499 NC_009441.1 5429157 5430581 R hypothetical protein complement(5429157..5430581) Flavobacterium johnsoniae UW101 5091923 YP_001196818.1 CDS Fjoh_4500 NC_009441.1 5430594 5433770 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5430594..5433770) Flavobacterium johnsoniae UW101 5091924 YP_001196819.1 CDS Fjoh_4501 NC_009441.1 5434482 5435171 R PFAM: protein of unknown function DUF541; hypothetical protein complement(5434482..5435171) Flavobacterium johnsoniae UW101 5091925 YP_001196820.1 CDS Fjoh_4502 NC_009441.1 5435225 5435863 R PFAM: Rhomboid family protein; rhomboid family protein complement(5435225..5435863) Flavobacterium johnsoniae UW101 5091926 YP_001196821.1 CDS Fjoh_4503 NC_009441.1 5435976 5436851 D PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 5435976..5436851 Flavobacterium johnsoniae UW101 5091927 YP_001196822.1 CDS Fjoh_4504 NC_009441.1 5436913 5438301 R PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphomannomutase complement(5436913..5438301) Flavobacterium johnsoniae UW101 5091928 YP_001196823.1 CDS Fjoh_4505 NC_009441.1 5438540 5439124 D PFAM: protein of unknown function DUF479; hypothetical protein 5438540..5439124 Flavobacterium johnsoniae UW101 5091929 YP_001196824.1 CDS Fjoh_4506 NC_009441.1 5439137 5440819 D TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 5439137..5440819 Flavobacterium johnsoniae UW101 5091930 YP_001196825.1 CDS Fjoh_4507 NC_009441.1 5440904 5442688 D PFAM: CBS domain containing protein; Cl- channel, voltage-gated family protein; Cl- channel, voltage-gated family protein 5440904..5442688 Flavobacterium johnsoniae UW101 5091931 YP_001196826.1 CDS Fjoh_4508 NC_009441.1 5442752 5443705 D PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 5442752..5443705 Flavobacterium johnsoniae UW101 5092581 YP_001196827.1 CDS Fjoh_4509 NC_009441.1 5443808 5446639 D TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A 5443808..5446639 Flavobacterium johnsoniae UW101 5092582 YP_001196828.1 CDS Fjoh_4510 NC_009441.1 5447357 5448085 D PFAM: conserved hypothetical protein 730; hypothetical protein 5447357..5448085 Flavobacterium johnsoniae UW101 5092583 YP_001196829.1 CDS Fjoh_4511 NC_009441.1 5448386 5451133 D hypothetical protein 5448386..5451133 Flavobacterium johnsoniae UW101 5092584 YP_001196830.1 CDS Fjoh_4512 NC_009441.1 5451323 5453737 D PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein; transketolase domain-containing protein 5451323..5453737 Flavobacterium johnsoniae UW101 5092585 YP_001196831.1 CDS Fjoh_4513 NC_009441.1 5453881 5454615 R TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(5453881..5454615) Flavobacterium johnsoniae UW101 5092586 YP_001196832.1 CDS Fjoh_4514 NC_009441.1 5454747 5456084 D PFAM: Pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 5454747..5456084 Flavobacterium johnsoniae UW101 5092587 YP_001196833.1 CDS Fjoh_4515 NC_009441.1 5456172 5457581 R exonuclease V subunit alpha complement(5456172..5457581) Flavobacterium johnsoniae UW101 5092588 YP_001196834.1 CDS Fjoh_4516 NC_009441.1 5457911 5458729 D hypothetical protein 5457911..5458729 Flavobacterium johnsoniae UW101 5092589 YP_001196835.1 CDS Fjoh_4517 NC_009441.1 5458726 5459334 D PFAM: conserved hypothetical protein 95; hypothetical protein 5458726..5459334 Flavobacterium johnsoniae UW101 5092590 YP_001196836.1 CDS Fjoh_4518 NC_009441.1 5459379 5461496 R PFAM: TonB-dependent receptor; TonB-dependent receptor complement(5459379..5461496) Flavobacterium johnsoniae UW101 5092591 YP_001196837.1 CDS Fjoh_4519 NC_009441.1 5461702 5462112 D hypothetical protein 5461702..5462112 Flavobacterium johnsoniae UW101 5092592 YP_001196838.1 CDS Fjoh_4520 NC_009441.1 5462188 5463546 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 5462188..5463546 Flavobacterium johnsoniae UW101 5092593 YP_001196839.1 CDS Fjoh_4521 NC_009441.1 5463557 5464249 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 5463557..5464249 Flavobacterium johnsoniae UW101 5092594 YP_001196840.1 CDS Fjoh_4522 NC_009441.1 5464343 5464537 D hypothetical protein 5464343..5464537 Flavobacterium johnsoniae UW101 5092595 YP_001196841.1 CDS Fjoh_4523 NC_009441.1 5464652 5465899 R PFAM: sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(5464652..5465899) Flavobacterium johnsoniae UW101 5092596 YP_001196842.1 CDS Fjoh_4524 NC_009441.1 5466378 5466671 D hypothetical protein 5466378..5466671 Flavobacterium johnsoniae UW101 5092524 YP_001196843.1 CDS Fjoh_4525 NC_009441.1 5466740 5467033 R PFAM: plasmid stabilization system; plasmid stabilization system protein complement(5466740..5467033) Flavobacterium johnsoniae UW101 5092598 YP_001196844.1 CDS Fjoh_4526 NC_009441.1 5467026 5467274 R TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; CopG/Arc/MetJ family transcriptional regulator complement(5467026..5467274) Flavobacterium johnsoniae UW101 5092599 YP_001196845.1 CDS Fjoh_4527 NC_009441.1 5467398 5467769 R PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM complement(5467398..5467769) Flavobacterium johnsoniae UW101 5092600 YP_001196846.1 CDS Fjoh_4528 NC_009441.1 5467777 5468256 R PFAM: transport-associated; transport-associated protein complement(5467777..5468256) Flavobacterium johnsoniae UW101 5092601 YP_001196847.1 CDS Fjoh_4529 NC_009441.1 5468413 5468907 R hypothetical protein complement(5468413..5468907) Flavobacterium johnsoniae UW101 5092602 YP_001196848.1 CDS Fjoh_4530 NC_009441.1 5469225 5470310 D TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; DNA polymerase III, delta; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 5469225..5470310 Flavobacterium johnsoniae UW101 5092603 YP_001196849.1 CDS Fjoh_4531 NC_009441.1 5470571 5470987 D hypothetical protein 5470571..5470987 Flavobacterium johnsoniae UW101 5092604 YP_001196850.1 CDS Fjoh_4532 NC_009441.1 5471003 5471581 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone) complement(5471003..5471581) Flavobacterium johnsoniae UW101 5092605 YP_001196851.1 CDS Fjoh_4533 NC_009441.1 5471740 5472300 R PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(5471740..5472300) Flavobacterium johnsoniae UW101 5092606 YP_001196852.1 CDS Fjoh_4534 NC_009441.1 5472414 5473304 R PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(5472414..5473304) Flavobacterium johnsoniae UW101 5092607 YP_001196853.1 CDS Fjoh_4535 NC_009441.1 5473341 5475419 R PFAM: Polyphosphate kinase; polyphosphate kinase complement(5473341..5475419) Flavobacterium johnsoniae UW101 5092608 YP_001196854.1 CDS Fjoh_4536 NC_009441.1 5475425 5475910 R PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase, SixA complement(5475425..5475910) Flavobacterium johnsoniae UW101 5092609 YP_001196855.1 CDS Fjoh_4537 NC_009441.1 5476408 5476956 D hypothetical protein 5476408..5476956 Flavobacterium johnsoniae UW101 5092610 YP_001196856.1 CDS Fjoh_4538 NC_009441.1 5476994 5484760 D PFAM: von Willebrand factor, type A; von Willebrand factor, type A 5476994..5484760 Flavobacterium johnsoniae UW101 5092611 YP_001196857.1 CDS Fjoh_4539 NC_009441.1 5484836 5485753 D hypothetical protein 5484836..5485753 Flavobacterium johnsoniae UW101 5092612 YP_001196858.1 CDS Fjoh_4540 NC_009441.1 5485766 5487697 D PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; OmpA/MotB domain-containing protein 5485766..5487697 Flavobacterium johnsoniae UW101 5092613 YP_001196859.1 CDS Fjoh_4541 NC_009441.1 5487820 5488272 R PFAM: Allergen V5/Tpx-1 family protein; Allergen V5/Tpx-1 family protein complement(5487820..5488272) Flavobacterium johnsoniae UW101 5092614 YP_001196860.1 CDS Fjoh_4542 NC_009441.1 5488492 5489136 R TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase complement(5488492..5489136) Flavobacterium johnsoniae UW101 5092615 YP_001196861.1 CDS Fjoh_4543 NC_009441.1 5489263 5490168 R member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z complement(5489263..5490168) Flavobacterium johnsoniae UW101 5092616 YP_001196862.1 CDS Fjoh_4544 NC_009441.1 5490263 5490595 R hypothetical protein complement(5490263..5490595) Flavobacterium johnsoniae UW101 5092617 YP_001196863.1 CDS pyrB NC_009441.1 5490869 5491795 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase complement(5490869..5491795) Flavobacterium johnsoniae UW101 5092618 YP_001196864.1 CDS Fjoh_4546 NC_009441.1 5491875 5492516 R hypothetical protein complement(5491875..5492516) Flavobacterium johnsoniae UW101 5092619 YP_001196865.1 CDS Fjoh_4547 NC_009441.1 5492599 5493138 R PFAM: phosphoribosyltransferase; phosphoribosyltransferase complement(5492599..5493138) Flavobacterium johnsoniae UW101 5092620 YP_001196866.1 CDS Fjoh_4548 NC_009441.1 5493363 5493911 D hypothetical protein 5493363..5493911 Flavobacterium johnsoniae UW101 5092621 YP_001196867.1 CDS Fjoh_4549 NC_009441.1 5493947 5494330 D hypothetical protein 5493947..5494330 Flavobacterium johnsoniae UW101 5092622 YP_001196868.1 CDS Fjoh_4550 NC_009441.1 5494704 5496323 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(5494704..5496323) Flavobacterium johnsoniae UW101 5092623 YP_001196869.1 CDS Fjoh_4551 NC_009441.1 5496672 5497442 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; redoxin domain-containing protein complement(5496672..5497442) Flavobacterium johnsoniae UW101 5092624 YP_001196870.1 CDS Fjoh_4552 NC_009441.1 5497586 5497816 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(5497586..5497816) Flavobacterium johnsoniae UW101 5092625 YP_001196871.1 CDS Fjoh_4553 NC_009441.1 5497899 5498129 D hypothetical protein 5497899..5498129 Flavobacterium johnsoniae UW101 5092626 YP_001196872.1 CDS Fjoh_4554 NC_009441.1 5498224 5498922 R hypothetical protein complement(5498224..5498922) Flavobacterium johnsoniae UW101 5092627 YP_001196873.1 CDS Fjoh_4555 NC_009441.1 5499208 5503944 R PFAM: glycoside hydrolase, family 18; Cna B domain protein; SMART: chitinase II; glycoside hydrolase complement(5499208..5503944) Flavobacterium johnsoniae UW101 5092628 YP_001196874.1 CDS Fjoh_4556 NC_009441.1 5504408 5506474 R PFAM: glycoside hydrolase, family 20; beta-N-acetylhexosaminidase complement(5504408..5506474) Flavobacterium johnsoniae UW101 5092629 YP_001196875.1 CDS Fjoh_4557 NC_009441.1 5506632 5508644 R TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate deaminase complement(5506632..5508644) Flavobacterium johnsoniae UW101 5092630 YP_001196876.1 CDS Fjoh_4558 NC_009441.1 5508689 5510269 R hypothetical protein complement(5508689..5510269) Flavobacterium johnsoniae UW101 5092631 YP_001196877.1 CDS Fjoh_4559 NC_009441.1 5510280 5513312 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5510280..5513312) Flavobacterium johnsoniae UW101 5092632 YP_001196878.1 CDS Fjoh_4560 NC_009441.1 5513642 5514664 R PFAM: glycoside hydrolase, family 18; SMART: chitinase II; glycoside hydrolase complement(5513642..5514664) Flavobacterium johnsoniae UW101 5092633 YP_001196879.1 CDS Fjoh_4561 NC_009441.1 5514750 5516267 R hypothetical protein complement(5514750..5516267) Flavobacterium johnsoniae UW101 5092634 YP_001196880.1 CDS Fjoh_4562 NC_009441.1 5516279 5519476 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5516279..5519476) Flavobacterium johnsoniae UW101 5092635 YP_001196881.1 CDS Fjoh_4563 NC_009441.1 5519738 5520790 D PFAM: histidine kinase internal region; signal transduction histidine kinase LytS 5519738..5520790 Flavobacterium johnsoniae UW101 5092636 YP_001196882.1 CDS Fjoh_4564 NC_009441.1 5520780 5521481 D PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 5520780..5521481 Flavobacterium johnsoniae UW101 5092875 YP_001196883.1 CDS Fjoh_4565 NC_009441.1 5521649 5523115 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 5521649..5523115 Flavobacterium johnsoniae UW101 5092876 YP_001196884.1 CDS Fjoh_4566 NC_009441.1 5523229 5523723 R hypothetical protein complement(5523229..5523723) Flavobacterium johnsoniae UW101 5092877 YP_001196885.1 CDS Fjoh_4567 NC_009441.1 5523814 5524470 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(5523814..5524470) Flavobacterium johnsoniae UW101 5092878 YP_001196886.1 CDS Fjoh_4568 NC_009441.1 5524825 5525628 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5524825..5525628) Flavobacterium johnsoniae UW101 5092879 YP_001196887.1 CDS Fjoh_4569 NC_009441.1 5525972 5527021 D PFAM: glutamine cyclotransferase; glutamine cyclotransferase 5525972..5527021 Flavobacterium johnsoniae UW101 5092525 YP_001196888.1 CDS Fjoh_4570 NC_009441.1 5527114 5528349 D catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 5527114..5528349 Flavobacterium johnsoniae UW101 5092881 YP_001196889.1 CDS Fjoh_4571 NC_009441.1 5528530 5529411 R hypothetical protein complement(5528530..5529411) Flavobacterium johnsoniae UW101 5092882 YP_001196890.1 CDS Fjoh_4572 NC_009441.1 5529509 5530555 D PFAM: Arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase 5529509..5530555 Flavobacterium johnsoniae UW101 5092883 YP_001196891.1 CDS Fjoh_4573 NC_009441.1 5530680 5531927 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 5530680..5531927 Flavobacterium johnsoniae UW101 5092884 YP_001196892.1 CDS Fjoh_4574 NC_009441.1 5531924 5534113 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor hybrid histidine kinase complement(5531924..5534113) Flavobacterium johnsoniae UW101 5092885 YP_001196893.1 CDS Fjoh_4575 NC_009441.1 5534227 5535507 R PFAM: sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(5534227..5535507) Flavobacterium johnsoniae UW101 5092886 YP_001196894.1 CDS Fjoh_4576 NC_009441.1 5535559 5536617 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(5535559..5536617) Flavobacterium johnsoniae UW101 5092887 YP_001196895.1 CDS Fjoh_4577 NC_009441.1 5536806 5537630 D PFAM: metallophosphoesterase; metallophosphoesterase 5536806..5537630 Flavobacterium johnsoniae UW101 5092888 YP_001196896.1 CDS Fjoh_4578 NC_009441.1 5537788 5538285 D hypothetical protein 5537788..5538285 Flavobacterium johnsoniae UW101 5092889 YP_001196897.1 CDS Fjoh_4579 NC_009441.1 5538495 5538920 R hypothetical protein complement(5538495..5538920) Flavobacterium johnsoniae UW101 5092890 YP_001196898.1 CDS Fjoh_4580 NC_009441.1 5538948 5540084 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(5538948..5540084) Flavobacterium johnsoniae UW101 5092891 YP_001196899.1 CDS Fjoh_4581 NC_009441.1 5540276 5540758 R hypothetical protein complement(5540276..5540758) Flavobacterium johnsoniae UW101 5092892 YP_001196900.1 CDS Fjoh_4582 NC_009441.1 5540850 5541641 R PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(5540850..5541641) Flavobacterium johnsoniae UW101 5092893 YP_001196901.1 CDS Fjoh_4583 NC_009441.1 5541748 5543079 R Fe-S oxidoreductase-like protein complement(5541748..5543079) Flavobacterium johnsoniae UW101 5092894 YP_001196902.1 CDS Fjoh_4584 NC_009441.1 5543086 5544051 R PFAM: Mammalian cell entry related domain protein; hypothetical protein complement(5543086..5544051) Flavobacterium johnsoniae UW101 5092895 YP_001196903.1 CDS Fjoh_4585 NC_009441.1 5544103 5545224 R PFAM: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(5544103..5545224) Flavobacterium johnsoniae UW101 5092896 YP_001196904.1 CDS Fjoh_4586 NC_009441.1 5545274 5548042 D organic solvent tolerance protein OstA-like protein 5545274..5548042 Flavobacterium johnsoniae UW101 5092897 YP_001196905.1 CDS Fjoh_4587 NC_009441.1 5548068 5548448 D TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 5548068..5548448 Flavobacterium johnsoniae UW101 5092898 YP_001196906.1 CDS mgsA NC_009441.1 5548429 5548830 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(5548429..5548830) Flavobacterium johnsoniae UW101 5092899 YP_001196907.1 CDS Fjoh_4589 NC_009441.1 5548814 5549665 R N-acetylglucosamine kinase-like protein complement(5548814..5549665) Flavobacterium johnsoniae UW101 5092900 YP_001196908.1 CDS Fjoh_4590 NC_009441.1 5549791 5550795 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I complement(5549791..5550795) Flavobacterium johnsoniae UW101 5092901 YP_001196909.1 CDS Fjoh_4591 NC_009441.1 5550890 5551876 R TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase complement(5550890..5551876) Flavobacterium johnsoniae UW101 5092902 YP_001196910.1 CDS Fjoh_4592 NC_009441.1 5552186 5556670 R hypothetical protein complement(5552186..5556670) Flavobacterium johnsoniae UW101 5092903 YP_001196911.1 CDS Fjoh_4593 NC_009441.1 5556875 5557897 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 5556875..5557897 Flavobacterium johnsoniae UW101 5092904 YP_001196912.1 CDS Fjoh_4594 NC_009441.1 5557900 5558607 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 5557900..5558607 Flavobacterium johnsoniae UW101 5092905 YP_001196913.1 CDS Fjoh_4595 NC_009441.1 5558660 5559298 D hypothetical protein 5558660..5559298 Flavobacterium johnsoniae UW101 5092906 YP_001196914.1 CDS Fjoh_4596 NC_009441.1 5559410 5559907 D PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 5559410..5559907 Flavobacterium johnsoniae UW101 5092907 YP_001196915.1 CDS Fjoh_4597 NC_009441.1 5560204 5561160 D hypothetical protein 5560204..5561160 Flavobacterium johnsoniae UW101 5092908 YP_001196916.1 CDS Fjoh_4598 NC_009441.1 5561286 5562377 D PFAM: protein of unknown function UPF0118; hypothetical protein 5561286..5562377 Flavobacterium johnsoniae UW101 5092909 YP_001196917.1 CDS Fjoh_4599 NC_009441.1 5562380 5563561 D hypothetical protein 5562380..5563561 Flavobacterium johnsoniae UW101 5092910 YP_001196918.1 CDS Fjoh_4600 NC_009441.1 5563564 5564130 D hypothetical protein 5563564..5564130 Flavobacterium johnsoniae UW101 5092911 YP_001196919.1 CDS Fjoh_4601 NC_009441.1 5564132 5564809 R PFAM: peptidase M15D, vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin; peptidase M15D, vanX D-ala-D-ala dipeptidase complement(5564132..5564809) Flavobacterium johnsoniae UW101 5092912 YP_001196920.1 CDS Fjoh_4602 NC_009441.1 5564866 5566614 D PFAM: peptidase S15; peptidase S15 5564866..5566614 Flavobacterium johnsoniae UW101 5092913 YP_001196921.1 CDS Fjoh_4603 NC_009441.1 5566678 5567961 D TIGRFAM: amidohydrolase; PFAM: peptidase M20; amidohydrolase 5566678..5567961 Flavobacterium johnsoniae UW101 5092914 YP_001196922.1 CDS Fjoh_4604 NC_009441.1 5568043 5569203 R PFAM: fatty acid desaturase; fatty acid desaturase complement(5568043..5569203) Flavobacterium johnsoniae UW101 5092915 YP_001196923.1 CDS Fjoh_4605 NC_009441.1 5569380 5570123 D hypothetical protein 5569380..5570123 Flavobacterium johnsoniae UW101 5092916 YP_001196924.1 CDS Fjoh_4606 NC_009441.1 5570233 5571183 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5570233..5571183 Flavobacterium johnsoniae UW101 5092917 YP_001196925.1 CDS Fjoh_4607 NC_009441.1 5571192 5572013 R Outer membrane phospholipase A-like protein complement(5571192..5572013) Flavobacterium johnsoniae UW101 5092918 YP_001196926.1 CDS Fjoh_4608 NC_009441.1 5572224 5573000 D hypothetical protein 5572224..5573000 Flavobacterium johnsoniae UW101 5092919 YP_001196927.1 CDS Fjoh_4609 NC_009441.1 5573086 5573517 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5573086..5573517 Flavobacterium johnsoniae UW101 5092920 YP_001196928.1 CDS Fjoh_4610 NC_009441.1 5573533 5574720 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(5573533..5574720) Flavobacterium johnsoniae UW101 5092921 YP_001196929.1 CDS Fjoh_4611 NC_009441.1 5574882 5575865 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(5574882..5575865) Flavobacterium johnsoniae UW101 5092922 YP_001196930.1 CDS Fjoh_4612 NC_009441.1 5576482 5577660 D TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; acetyl-CoA acetyltransferase 5576482..5577660 Flavobacterium johnsoniae UW101 5094131 YP_001196931.1 CDS Fjoh_4613 NC_009441.1 5577728 5578489 D PFAM: NLP/P60 protein; NLP/P60 protein 5577728..5578489 Flavobacterium johnsoniae UW101 5092924 YP_001196932.1 CDS Fjoh_4614 NC_009441.1 5578520 5579572 D hypothetical protein 5578520..5579572 Flavobacterium johnsoniae UW101 5092925 YP_001196933.1 CDS Fjoh_4615 NC_009441.1 5579714 5580559 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(5579714..5580559) Flavobacterium johnsoniae UW101 5092926 YP_001196934.1 CDS Fjoh_4616 NC_009441.1 5580676 5581662 D PFAM: aldo/keto reductase; aldo/keto reductase 5580676..5581662 Flavobacterium johnsoniae UW101 5092927 YP_001196935.1 CDS Fjoh_4617 NC_009441.1 5581943 5582548 D PFAM: NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 5581943..5582548 Flavobacterium johnsoniae UW101 5092928 YP_001196936.1 CDS Fjoh_4618 NC_009441.1 5582551 5582829 D hypothetical protein 5582551..5582829 Flavobacterium johnsoniae UW101 5092929 YP_001196937.1 CDS Fjoh_4619 NC_009441.1 5582970 5583434 D hypothetical protein 5582970..5583434 Flavobacterium johnsoniae UW101 5094073 YP_001196938.1 CDS Fjoh_4620 NC_009441.1 5583522 5584229 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(5583522..5584229) Flavobacterium johnsoniae UW101 5094074 YP_001196939.1 CDS Fjoh_4621 NC_009441.1 5584434 5585321 D PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 5584434..5585321 Flavobacterium johnsoniae UW101 5094075 YP_001196940.1 CDS Fjoh_4622 NC_009441.1 5585714 5586997 D hypothetical protein 5585714..5586997 Flavobacterium johnsoniae UW101 5094076 YP_001196941.1 CDS Fjoh_4623 NC_009441.1 5587065 5587838 R PFAM: protein of unknown function DUF306, Meta and HslJ; hypothetical protein complement(5587065..5587838) Flavobacterium johnsoniae UW101 5094077 YP_001196942.1 CDS Fjoh_4624 NC_009441.1 5588108 5590621 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; nitrite reductase (NAD(P)H) large subunit 5588108..5590621 Flavobacterium johnsoniae UW101 5094078 YP_001196943.1 CDS Fjoh_4625 NC_009441.1 5590977 5591354 D TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; nitrite reductase (NAD(P)H) small subunit 5590977..5591354 Flavobacterium johnsoniae UW101 5094079 YP_001196944.1 CDS Fjoh_4626 NC_009441.1 5591788 5592372 D hypothetical protein 5591788..5592372 Flavobacterium johnsoniae UW101 5094080 YP_001196945.1 CDS Fjoh_4627 NC_009441.1 5592380 5594191 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; multi-sensor signal transduction histidine kinase 5592380..5594191 Flavobacterium johnsoniae UW101 5094081 YP_001196946.1 CDS Fjoh_4628 NC_009441.1 5594601 5595260 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 5594601..5595260 Flavobacterium johnsoniae UW101 5094082 YP_001196947.1 CDS Fjoh_4629 NC_009441.1 5595358 5596842 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 5595358..5596842 Flavobacterium johnsoniae UW101 5094083 YP_001196948.1 CDS Fjoh_4630 NC_009441.1 5596938 5598197 D hypothetical protein 5596938..5598197 Flavobacterium johnsoniae UW101 5094084 YP_001196949.1 CDS Fjoh_4631 NC_009441.1 5598321 5598944 D PFAM: Methyltransferase type 11; type 11 methyltransferase 5598321..5598944 Flavobacterium johnsoniae UW101 5094085 YP_001196950.1 CDS Fjoh_4632 NC_009441.1 5599046 5599750 R PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator complement(5599046..5599750) Flavobacterium johnsoniae UW101 5094086 YP_001196951.1 CDS Fjoh_4633 NC_009441.1 5599931 5603446 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molybdopterin oxidoreductase 5599931..5603446 Flavobacterium johnsoniae UW101 5094087 YP_001196952.1 CDS Fjoh_4634 NC_009441.1 5603590 5605020 D PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 5603590..5605020 Flavobacterium johnsoniae UW101 5094088 YP_001196953.1 CDS Fjoh_4635 NC_009441.1 5605377 5605997 D hypothetical protein 5605377..5605997 Flavobacterium johnsoniae UW101 5094089 YP_001196954.1 CDS Fjoh_4636 NC_009441.1 5606094 5607101 R TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A complement(5606094..5607101) Flavobacterium johnsoniae UW101 5094090 YP_001196955.1 CDS moaC NC_009441.1 5607088 5608002 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA complement(5607088..5608002) Flavobacterium johnsoniae UW101 5094091 YP_001196956.1 CDS Fjoh_4638 NC_009441.1 5608002 5608433 R PFAM: molybdopterin biosynthesis MoaE protein; molybdopterin biosynthesis MoaE protein complement(5608002..5608433) Flavobacterium johnsoniae UW101 5094092 YP_001196957.1 CDS Fjoh_4639 NC_009441.1 5608618 5609685 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SMART: Rhodanese domain protein; UBA/THIF-type NAD/FAD binding protein complement(5608618..5609685) Flavobacterium johnsoniae UW101 5094093 YP_001196958.1 CDS Fjoh_4640 NC_009441.1 5609691 5609930 R PFAM: thiamineS protein; sulfur transfer protein ThiS complement(5609691..5609930) Flavobacterium johnsoniae UW101 5094094 YP_001196959.1 CDS Fjoh_4641 NC_009441.1 5609933 5610721 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C-methyltransferase complement(5609933..5610721) Flavobacterium johnsoniae UW101 5094095 YP_001196960.1 CDS Fjoh_4642 NC_009441.1 5610727 5611299 R molybdopterin-guanine dinucleotide biosynthesis protein A-like protein complement(5610727..5611299) Flavobacterium johnsoniae UW101 5094096 YP_001196961.1 CDS Fjoh_4643 NC_009441.1 5611558 5612304 R PFAM: protein of unknown function DUF81; hypothetical protein complement(5611558..5612304) Flavobacterium johnsoniae UW101 5094097 YP_001196962.1 CDS Fjoh_4644 NC_009441.1 5612438 5613610 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; molybdenum cofactor synthesis domain-containing protein complement(5612438..5613610) Flavobacterium johnsoniae UW101 5094098 YP_001196963.1 CDS Fjoh_4645 NC_009441.1 5614543 5617668 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 5614543..5617668 Flavobacterium johnsoniae UW101 5094099 YP_001196964.1 CDS Fjoh_4646 NC_009441.1 5617684 5619156 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5617684..5619156 Flavobacterium johnsoniae UW101 5094100 YP_001196965.1 CDS Fjoh_4647 NC_009441.1 5619188 5621110 D PFAM: sulfatase; sulfatase 5619188..5621110 Flavobacterium johnsoniae UW101 5094101 YP_001196966.1 CDS Fjoh_4648 NC_009441.1 5621434 5622504 D sterol desaturase-like protein 5621434..5622504 Flavobacterium johnsoniae UW101 5094102 YP_001196967.1 CDS Fjoh_4649 NC_009441.1 5622595 5623311 D PFAM: Rhodanese domain protein; Thioredoxin domain; rhodanese domain-containing protein 5622595..5623311 Flavobacterium johnsoniae UW101 5094103 YP_001196968.1 CDS Fjoh_4650 NC_009441.1 5623339 5624958 D PFAM: sulfatase; sulfatase 5623339..5624958 Flavobacterium johnsoniae UW101 5094104 YP_001196969.1 CDS Fjoh_4651 NC_009441.1 5625177 5626436 D PFAM: conserved hypothetical protein 698; hypothetical protein 5625177..5626436 Flavobacterium johnsoniae UW101 5094105 YP_001196970.1 CDS Fjoh_4652 NC_009441.1 5627114 5628769 D PFAM: sulfatase; sulfatase 5627114..5628769 Flavobacterium johnsoniae UW101 5094106 YP_001196971.1 CDS Fjoh_4653 NC_009441.1 5628968 5629888 D TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase 5628968..5629888 Flavobacterium johnsoniae UW101 5094107 YP_001196972.1 CDS Fjoh_4654 NC_009441.1 5629994 5630914 D hypothetical protein 5629994..5630914 Flavobacterium johnsoniae UW101 5094108 YP_001196973.1 CDS Fjoh_4655 NC_009441.1 5630898 5632832 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; SufS subfamily cysteine desulfurase 5630898..5632832 Flavobacterium johnsoniae UW101 5094109 YP_001196974.1 CDS Fjoh_4656 NC_009441.1 5633189 5633638 R hypothetical protein complement(5633189..5633638) Flavobacterium johnsoniae UW101 5094110 YP_001196975.1 CDS Fjoh_4657 NC_009441.1 5633823 5635076 R TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; ornithine aminotransferase complement(5633823..5635076) Flavobacterium johnsoniae UW101 5094111 YP_001196976.1 CDS Fjoh_4658 NC_009441.1 5635271 5635723 D PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator 5635271..5635723 Flavobacterium johnsoniae UW101 5094112 YP_001196977.1 CDS Fjoh_4659 NC_009441.1 5635830 5636603 D PFAM: dienelactone hydrolase; dienelactone hydrolase 5635830..5636603 Flavobacterium johnsoniae UW101 5094113 YP_001196978.1 CDS Fjoh_4660 NC_009441.1 5636706 5637674 D hypothetical protein 5636706..5637674 Flavobacterium johnsoniae UW101 5094114 YP_001196979.1 CDS Fjoh_4661 NC_009441.1 5637685 5638710 D PFAM: peptidase M20; peptidase M28; peptidase M28 5637685..5638710 Flavobacterium johnsoniae UW101 5094115 YP_001196980.1 CDS rho NC_009441.1 5638867 5640681 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(5638867..5640681) Flavobacterium johnsoniae UW101 5094116 YP_001196981.1 CDS Fjoh_4663 NC_009441.1 5640865 5641281 D hypothetical protein 5640865..5641281 Flavobacterium johnsoniae UW101 5094117 YP_001196982.1 CDS Fjoh_4664 NC_009441.1 5641443 5642102 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 5641443..5642102 Flavobacterium johnsoniae UW101 5094118 YP_001196983.1 CDS Fjoh_4665 NC_009441.1 5642138 5643058 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase 5642138..5643058 Flavobacterium johnsoniae UW101 5094119 YP_001196984.1 CDS Fjoh_4666 NC_009441.1 5643062 5643598 R TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; phosphodiesterase complement(5643062..5643598) Flavobacterium johnsoniae UW101 5094120 YP_001196985.1 CDS truA NC_009441.1 5643692 5644546 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 5643692..5644546 Flavobacterium johnsoniae UW101 5094121 YP_001196986.1 CDS Fjoh_4668 NC_009441.1 5644642 5646396 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter transmembrane protein 5644642..5646396 Flavobacterium johnsoniae UW101 5094122 YP_001196987.1 CDS Fjoh_4669 NC_009441.1 5646412 5647983 D PFAM: histidine kinase internal region; signal transduction histidine kinase LytS 5646412..5647983 Flavobacterium johnsoniae UW101 5094123 YP_001196988.1 CDS Fjoh_4670 NC_009441.1 5648069 5650666 D hypothetical protein 5648069..5650666 Flavobacterium johnsoniae UW101 5094124 YP_001196989.1 CDS Fjoh_4671 NC_009441.1 5650685 5654020 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 5650685..5654020 Flavobacterium johnsoniae UW101 5094125 YP_001196990.1 CDS Fjoh_4672 NC_009441.1 5654032 5655354 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5654032..5655354 Flavobacterium johnsoniae UW101 5094126 YP_001196991.1 CDS Fjoh_4673 NC_009441.1 5655454 5656143 R hypothetical protein complement(5655454..5656143) Flavobacterium johnsoniae UW101 5094127 YP_001196992.1 CDS Fjoh_4674 NC_009441.1 5656475 5657239 D PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 5656475..5657239 Flavobacterium johnsoniae UW101 5094128 YP_001196993.1 CDS Fjoh_4675 NC_009441.1 5657466 5658050 D PFAM: NUMOD4 domain protein; NUMOD4 domain-containing protein 5657466..5658050 Flavobacterium johnsoniae UW101 5092373 YP_001196994.1 CDS Fjoh_4676 NC_009441.1 5658421 5659809 D TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; dihydrolipoamide dehydrogenase 5658421..5659809 Flavobacterium johnsoniae UW101 5092374 YP_001196995.1 CDS Fjoh_4677 NC_009441.1 5660032 5660985 D virion core protein (lumpy skin disease virus)-like protein 5660032..5660985 Flavobacterium johnsoniae UW101 5092375 YP_001196996.1 CDS Fjoh_4678 NC_009441.1 5660985 5661227 D hypothetical protein 5660985..5661227 Flavobacterium johnsoniae UW101 5092376 YP_001196997.1 CDS Fjoh_4679 NC_009441.1 5661240 5662211 D hypothetical protein 5661240..5662211 Flavobacterium johnsoniae UW101 5092377 YP_001196998.1 CDS Fjoh_4680 NC_009441.1 5662236 5663195 D hypothetical protein 5662236..5663195 Flavobacterium johnsoniae UW101 5092378 YP_001196999.1 CDS Fjoh_4681 NC_009441.1 5663301 5664050 D hypothetical protein 5663301..5664050 Flavobacterium johnsoniae UW101 5092379 YP_001197000.1 CDS Fjoh_4682 NC_009441.1 5664147 5664656 D hypothetical protein 5664147..5664656 Flavobacterium johnsoniae UW101 5092380 YP_001197001.1 CDS Fjoh_4683 NC_009441.1 5664773 5665288 D PFAM: protein of unknown function DUF477; hypothetical protein 5664773..5665288 Flavobacterium johnsoniae UW101 5092381 YP_001197002.1 CDS Fjoh_4684 NC_009441.1 5665358 5666002 D hypothetical protein 5665358..5666002 Flavobacterium johnsoniae UW101 5092382 YP_001197003.1 CDS Fjoh_4685 NC_009441.1 5666003 5666401 D hypothetical protein 5666003..5666401 Flavobacterium johnsoniae UW101 5092383 YP_001197004.1 CDS Fjoh_4686 NC_009441.1 5666524 5667282 D hypothetical protein 5666524..5667282 Flavobacterium johnsoniae UW101 5092384 YP_001197005.1 CDS Fjoh_4687 NC_009441.1 5667378 5668280 D PFAM: Arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase 5667378..5668280 Flavobacterium johnsoniae UW101 5092385 YP_001197006.1 CDS Fjoh_4688 NC_009441.1 5668334 5668765 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5668334..5668765 Flavobacterium johnsoniae UW101 5092386 YP_001197007.1 CDS Fjoh_4689 NC_009441.1 5668912 5669325 D PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 5668912..5669325 Flavobacterium johnsoniae UW101 5092387 YP_001197008.1 CDS Fjoh_4690 NC_009441.1 5669525 5670010 D hypothetical protein 5669525..5670010 Flavobacterium johnsoniae UW101 5092388 YP_001197009.1 CDS Fjoh_4691 NC_009441.1 5670096 5671022 D PFAM: NmrA family protein; NmrA family protein 5670096..5671022 Flavobacterium johnsoniae UW101 5092389 YP_001197010.1 CDS Fjoh_4692 NC_009441.1 5671042 5671956 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 5671042..5671956 Flavobacterium johnsoniae UW101 5092390 YP_001197011.1 CDS Fjoh_4693 NC_009441.1 5672019 5672447 D hypothetical protein 5672019..5672447 Flavobacterium johnsoniae UW101 5092391 YP_001197012.1 CDS Fjoh_4694 NC_009441.1 5672457 5672672 D hypothetical protein 5672457..5672672 Flavobacterium johnsoniae UW101 5092392 YP_001197013.1 CDS Fjoh_4695 NC_009441.1 5672736 5673434 D hypothetical protein 5672736..5673434 Flavobacterium johnsoniae UW101 5092393 YP_001197014.1 CDS Fjoh_4696 NC_009441.1 5673484 5673852 D PFAM: protein of unknown function DUF1486; hypothetical protein 5673484..5673852 Flavobacterium johnsoniae UW101 5092394 YP_001197015.1 CDS Fjoh_4697 NC_009441.1 5674017 5675054 D PFAM: beta-lactamase; beta-lactamase 5674017..5675054 Flavobacterium johnsoniae UW101 5092395 YP_001197016.1 CDS Fjoh_4698 NC_009441.1 5675060 5675482 D hypothetical protein 5675060..5675482 Flavobacterium johnsoniae UW101 5092396 YP_001197017.1 CDS Fjoh_4699 NC_009441.1 5675485 5676588 D Zn-dependent hydrolase 5675485..5676588 Flavobacterium johnsoniae UW101 5092397 YP_001197018.1 CDS Fjoh_4700 NC_009441.1 5676665 5677789 D 6-phosphogluconolactonase 5676665..5677789 Flavobacterium johnsoniae UW101 5092398 YP_001197019.1 CDS Fjoh_4701 NC_009441.1 5677844 5678362 D hypothetical protein 5677844..5678362 Flavobacterium johnsoniae UW101 5092399 YP_001197020.1 CDS Fjoh_4702 NC_009441.1 5678451 5679032 D PFAM: conserved hypothetical protein 730; hypothetical protein 5678451..5679032 Flavobacterium johnsoniae UW101 5092400 YP_001197021.1 CDS Fjoh_4703 NC_009441.1 5679124 5679591 D PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 5679124..5679591 Flavobacterium johnsoniae UW101 5092401 YP_001197022.1 CDS Fjoh_4704 NC_009441.1 5679662 5680030 D hypothetical protein 5679662..5680030 Flavobacterium johnsoniae UW101 5092402 YP_001197023.1 CDS Fjoh_4705 NC_009441.1 5680037 5680720 D hypothetical protein 5680037..5680720 Flavobacterium johnsoniae UW101 5092403 YP_001197024.1 CDS Fjoh_4706 NC_009441.1 5680761 5681126 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(5680761..5681126) Flavobacterium johnsoniae UW101 5092404 YP_001197025.1 CDS Fjoh_4707 NC_009441.1 5681144 5681887 R hypothetical protein complement(5681144..5681887) Flavobacterium johnsoniae UW101 5092405 YP_001197026.1 CDS Fjoh_4708 NC_009441.1 5681913 5684060 R PFAM: UspA domain protein; sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(5681913..5684060) Flavobacterium johnsoniae UW101 5092406 YP_001197027.1 CDS Fjoh_4709 NC_009441.1 5684380 5685807 D TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 5684380..5685807 Flavobacterium johnsoniae UW101 5092407 YP_001197028.1 CDS Fjoh_4710 NC_009441.1 5685915 5687111 D PFAM: SH3, type 3 domain protein; SH3 type 3 domain-containing protein 5685915..5687111 Flavobacterium johnsoniae UW101 5092408 YP_001197029.1 CDS panB NC_009441.1 5687162 5687980 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 5687162..5687980 Flavobacterium johnsoniae UW101 5092409 YP_001197030.1 CDS Fjoh_4712 NC_009441.1 5688195 5688884 D PFAM: pseudouridine synthase; pseudouridine synthase 5688195..5688884 Flavobacterium johnsoniae UW101 5092410 YP_001197031.1 CDS Fjoh_4713 NC_009441.1 5688961 5690289 D PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 5688961..5690289 Flavobacterium johnsoniae UW101 5092411 YP_001197032.1 CDS Fjoh_4714 NC_009441.1 5690411 5691205 D hypothetical protein 5690411..5691205 Flavobacterium johnsoniae UW101 5092412 YP_001197033.1 CDS Fjoh_4715 NC_009441.1 5691301 5695353 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 5691301..5695353 Flavobacterium johnsoniae UW101 5092413 YP_001197034.1 CDS Fjoh_4716 NC_009441.1 5695447 5696292 D PFAM: protein of unknown function, zinc metallopeptidase; hypothetical protein 5695447..5696292 Flavobacterium johnsoniae UW101 5092414 YP_001197035.1 CDS Fjoh_4717 NC_009441.1 5696578 5697294 R PFAM: LmbE family protein; LmbE family protein complement(5696578..5697294) Flavobacterium johnsoniae UW101 5094132 YP_001197036.1 CDS Fjoh_4718 NC_009441.1 5697412 5698482 R TIGRFAM: isochorismate synthase; PFAM: Anthranilate synthase component I and chorismate binding protein; isochorismate synthase complement(5697412..5698482) Flavobacterium johnsoniae UW101 5092416 YP_001197037.1 CDS Fjoh_4719 NC_009441.1 5698486 5698917 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(5698486..5698917) Flavobacterium johnsoniae UW101 5092417 YP_001197038.1 CDS Fjoh_4720 NC_009441.1 5699217 5700728 D hypothetical protein 5699217..5700728 Flavobacterium johnsoniae UW101 5092418 YP_001197039.1 CDS Fjoh_4721 NC_009441.1 5700917 5702770 D PFAM: Fibronectin, type III domain protein; Endonuclease I; endonuclease I 5700917..5702770 Flavobacterium johnsoniae UW101 5092419 YP_001197040.1 CDS Fjoh_4722 NC_009441.1 5702980 5703543 D hypothetical protein 5702980..5703543 Flavobacterium johnsoniae UW101 5092420 YP_001197041.1 CDS Fjoh_4723 NC_009441.1 5703725 5705569 D PFAM: Fibronectin, type III domain protein; Endonuclease I; endonuclease I 5703725..5705569 Flavobacterium johnsoniae UW101 5092421 YP_001197042.1 CDS Fjoh_4724 NC_009441.1 5705859 5709512 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 5705859..5709512 Flavobacterium johnsoniae UW101 5092422 YP_001197043.1 CDS Fjoh_4725 NC_009441.1 5709729 5710013 R hypothetical protein complement(5709729..5710013) Flavobacterium johnsoniae UW101 5092423 YP_001197044.1 CDS Fjoh_4726 NC_009441.1 5710248 5712659 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 5710248..5712659 Flavobacterium johnsoniae UW101 5092424 YP_001197045.1 CDS Fjoh_4727 NC_009441.1 5712804 5713235 D hypothetical protein 5712804..5713235 Flavobacterium johnsoniae UW101 5092425 YP_001197046.1 CDS Fjoh_4728 NC_009441.1 5713413 5715191 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 5713413..5715191 Flavobacterium johnsoniae UW101 5092426 YP_001197047.1 CDS Fjoh_4729 NC_009441.1 5715288 5716553 R hypothetical protein complement(5715288..5716553) Flavobacterium johnsoniae UW101 5092427 YP_001197048.1 CDS Fjoh_4730 NC_009441.1 5716805 5717350 R PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; exonuclease complement(5716805..5717350) Flavobacterium johnsoniae UW101 5092428 YP_001197049.1 CDS Fjoh_4731 NC_009441.1 5717495 5717995 R hypothetical protein complement(5717495..5717995) Flavobacterium johnsoniae UW101 5090058 YP_001197050.1 CDS Fjoh_4732 NC_009441.1 5719262 5720590 R PFAM: zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein complement(5719262..5720590) Flavobacterium johnsoniae UW101 5090059 YP_001197051.1 CDS Fjoh_4733 NC_009441.1 5720596 5723688 R PFAM: WGR domain protein; WGR domain-containing protein complement(5720596..5723688) Flavobacterium johnsoniae UW101 5090060 YP_001197052.1 CDS Fjoh_4734 NC_009441.1 5724047 5725342 R hypothetical protein complement(5724047..5725342) Flavobacterium johnsoniae UW101 5090061 YP_001197053.1 CDS Fjoh_4735 NC_009441.1 5725551 5726180 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 5725551..5726180 Flavobacterium johnsoniae UW101 5090062 YP_001197054.1 CDS Fjoh_4736 NC_009441.1 5726187 5726834 D hypothetical protein 5726187..5726834 Flavobacterium johnsoniae UW101 5090063 YP_001197055.1 CDS Fjoh_4737 NC_009441.1 5726834 5727469 D hypothetical protein 5726834..5727469 Flavobacterium johnsoniae UW101 5090064 YP_001197056.1 CDS Fjoh_4738 NC_009441.1 5727466 5728260 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; histidine kinase 5727466..5728260 Flavobacterium johnsoniae UW101 5090065 YP_001197057.1 CDS Fjoh_4739 NC_009441.1 5728591 5728989 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 5728591..5728989 Flavobacterium johnsoniae UW101 5090066 YP_001197058.1 CDS Fjoh_4740 NC_009441.1 5729059 5731977 R hypothetical protein complement(5729059..5731977) Flavobacterium johnsoniae UW101 5090067 YP_001197059.1 CDS Fjoh_4741 NC_009441.1 5732183 5732980 R PFAM: TatD-related deoxyribonuclease; TatD-related deoxyribonuclease complement(5732183..5732980) Flavobacterium johnsoniae UW101 5090068 YP_001197060.1 CDS Fjoh_4742 NC_009441.1 5733073 5733411 R hypothetical protein complement(5733073..5733411) Flavobacterium johnsoniae UW101 5090069 YP_001197061.1 CDS Fjoh_4743 NC_009441.1 5733416 5733736 R PFAM: peptidase S24, S26A and S26B; prophage repressor complement(5733416..5733736) Flavobacterium johnsoniae UW101 5090070 YP_001197062.1 CDS Fjoh_4744 NC_009441.1 5733829 5734050 R hypothetical protein complement(5733829..5734050) Flavobacterium johnsoniae UW101 5090071 YP_001197063.1 CDS Fjoh_4745 NC_009441.1 5734275 5735696 R PFAM: protein of unknown function UPF0027; hypothetical protein complement(5734275..5735696) Flavobacterium johnsoniae UW101 5090072 YP_001197064.1 CDS Fjoh_4746 NC_009441.1 5735770 5736330 R hypothetical protein complement(5735770..5736330) Flavobacterium johnsoniae UW101 5090073 YP_001197065.1 CDS Fjoh_4747 NC_009441.1 5736734 5738974 R hypothetical protein complement(5736734..5738974) Flavobacterium johnsoniae UW101 5090074 YP_001197066.1 CDS Fjoh_4748 NC_009441.1 5740310 5740957 D hypothetical protein 5740310..5740957 Flavobacterium johnsoniae UW101 5094133 YP_001197067.1 CDS Fjoh_4749 NC_009441.1 5741190 5742191 R hypothetical protein complement(5741190..5742191) Flavobacterium johnsoniae UW101 5090076 YP_001197068.1 CDS Fjoh_4750 NC_009441.1 5742208 5746599 R PFAM: PKD domain containing protein; PKD domain-containing protein complement(5742208..5746599) Flavobacterium johnsoniae UW101 5090077 YP_001197069.1 CDS Fjoh_4751 NC_009441.1 5746912 5747949 D transcriptional regulator-like protein 5746912..5747949 Flavobacterium johnsoniae UW101 5090078 YP_001197070.1 CDS Fjoh_4752 NC_009441.1 5748171 5748629 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 5748171..5748629 Flavobacterium johnsoniae UW101 5090079 YP_001197071.1 CDS Fjoh_4753 NC_009441.1 5748664 5751054 D PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase 5748664..5751054 Flavobacterium johnsoniae UW101 5090080 YP_001197072.1 CDS Fjoh_4754 NC_009441.1 5751104 5751457 D PFAM: S23 ribosomal protein; S23 ribosomal protein 5751104..5751457 Flavobacterium johnsoniae UW101 5090081 YP_001197073.1 CDS Fjoh_4755 NC_009441.1 5751516 5752697 D TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 5751516..5752697 Flavobacterium johnsoniae UW101 5090082 YP_001197074.1 CDS Fjoh_4756 NC_009441.1 5752844 5754649 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase 5752844..5754649 Flavobacterium johnsoniae UW101 5090083 YP_001197075.1 CDS Fjoh_4757 NC_009441.1 5754877 5755971 D PFAM: glycoside hydrolase, family 18; SMART: chitinase II; glycoside hydrolase 5754877..5755971 Flavobacterium johnsoniae UW101 5090084 YP_001197076.1 CDS Fjoh_4758 NC_009441.1 5756042 5756566 R hypothetical protein complement(5756042..5756566) Flavobacterium johnsoniae UW101 5090085 YP_001197077.1 CDS Fjoh_4759 NC_009441.1 5756639 5757160 R hypothetical protein complement(5756639..5757160) Flavobacterium johnsoniae UW101 5090086 YP_001197078.1 CDS Fjoh_4760 NC_009441.1 5757195 5757632 R PFAM: protein of unknown function DUF306, Meta and HslJ; hypothetical protein complement(5757195..5757632) Flavobacterium johnsoniae UW101 5090087 YP_001197079.1 CDS Fjoh_4761 NC_009441.1 5757835 5758374 D PFAM: superoxide dismutase, copper/zinc binding; superoxide dismutase, copper/zinc binding 5757835..5758374 Flavobacterium johnsoniae UW101 5090088 YP_001197080.1 CDS Fjoh_4762 NC_009441.1 5758484 5759686 D hypothetical protein 5758484..5759686 Flavobacterium johnsoniae UW101 5090089 YP_001197081.1 CDS Fjoh_4763 NC_009441.1 5759723 5760358 R PFAM: carbonic anhydrase; carbonate dehydratase complement(5759723..5760358) Flavobacterium johnsoniae UW101 5090090 YP_001197082.1 CDS Fjoh_4764 NC_009441.1 5760485 5762134 R PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; sulfate transporter complement(5760485..5762134) Flavobacterium johnsoniae UW101 5090091 YP_001197083.1 CDS Fjoh_4765 NC_009441.1 5762214 5762519 R hypothetical protein complement(5762214..5762519) Flavobacterium johnsoniae UW101 5090092 YP_001197084.1 CDS Fjoh_4766 NC_009441.1 5762629 5763108 R PFAM: Ferritin, Dps family protein; Dps family ferritin complement(5762629..5763108) Flavobacterium johnsoniae UW101 5090093 YP_001197085.1 CDS Fjoh_4767 NC_009441.1 5763218 5764159 D PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 5763218..5764159 Flavobacterium johnsoniae UW101 5090094 YP_001197086.1 CDS Fjoh_4768 NC_009441.1 5764196 5764459 R hypothetical protein complement(5764196..5764459) Flavobacterium johnsoniae UW101 5090095 YP_001197087.1 CDS Fjoh_4769 NC_009441.1 5764560 5765225 R PFAM: protein of unknown function DUF752; hypothetical protein complement(5764560..5765225) Flavobacterium johnsoniae UW101 5090096 YP_001197088.1 CDS Fjoh_4770 NC_009441.1 5765536 5766606 D TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase, class IV; branched-chain amino acid aminotransferase 5765536..5766606 Flavobacterium johnsoniae UW101 5090097 YP_001197089.1 CDS Fjoh_4771 NC_009441.1 5766660 5767025 R hypothetical protein complement(5766660..5767025) Flavobacterium johnsoniae UW101 5090098 YP_001197090.1 CDS Fjoh_4772 NC_009441.1 5767029 5767406 R hypothetical protein complement(5767029..5767406) Flavobacterium johnsoniae UW101 5090099 YP_001197091.1 CDS Fjoh_4773 NC_009441.1 5767662 5768042 R hypothetical protein complement(5767662..5768042) Flavobacterium johnsoniae UW101 5090100 YP_001197092.1 CDS Fjoh_4774 NC_009441.1 5768388 5769569 D hypothetical protein 5768388..5769569 Flavobacterium johnsoniae UW101 5090101 YP_001197093.1 CDS Fjoh_4775 NC_009441.1 5769645 5770187 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 5769645..5770187 Flavobacterium johnsoniae UW101 5090102 YP_001197094.1 CDS Fjoh_4776 NC_009441.1 5770221 5770634 D hypothetical protein 5770221..5770634 Flavobacterium johnsoniae UW101 5090103 YP_001197095.1 CDS Fjoh_4777 NC_009441.1 5770654 5771112 D hypothetical protein 5770654..5771112 Flavobacterium johnsoniae UW101 5090104 YP_001197096.1 CDS Fjoh_4778 NC_009441.1 5771187 5772269 R PFAM: glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase complement(5771187..5772269) Flavobacterium johnsoniae UW101 5090105 YP_001197097.1 CDS Fjoh_4779 NC_009441.1 5772488 5773765 D hypothetical protein 5772488..5773765 Flavobacterium johnsoniae UW101 5090106 YP_001197098.1 CDS Fjoh_4780 NC_009441.1 5773901 5775874 D PFAM: K+ potassium transporter; K+ potassium transporter 5773901..5775874 Flavobacterium johnsoniae UW101 5090107 YP_001197099.1 CDS Fjoh_4781 NC_009441.1 5776025 5777239 D PFAM: Fmu (Sun) domain protein; Fmu (Sun) domain-containing protein 5776025..5777239 Flavobacterium johnsoniae UW101 5090108 YP_001197100.1 CDS Fjoh_4782 NC_009441.1 5777423 5778469 R Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein complement(5777423..5778469) Flavobacterium johnsoniae UW101 5090109 YP_001197101.1 CDS Fjoh_4783 NC_009441.1 5778478 5779431 R PFAM: Abortive infection protein; abortive infection protein complement(5778478..5779431) Flavobacterium johnsoniae UW101 5090110 YP_001197102.1 CDS Fjoh_4784 NC_009441.1 5779543 5779887 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase 5779543..5779887 Flavobacterium johnsoniae UW101 5090111 YP_001197103.1 CDS Fjoh_4785 NC_009441.1 5779981 5782449 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 5779981..5782449 Flavobacterium johnsoniae UW101 5090112 YP_001197104.1 CDS fumC NC_009441.1 5783093 5784478 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 5783093..5784478 Flavobacterium johnsoniae UW101 5090113 YP_001197105.1 CDS Fjoh_4787 NC_009441.1 5784592 5785794 R PFAM: alanine dehydrogenase/PNT domain protein; NAD(P) transhydrogenase subunit alpha complement(5784592..5785794) Flavobacterium johnsoniae UW101 5089415 YP_001197106.1 CDS Fjoh_4788 NC_009441.1 5786036 5787238 D PFAM: beta-lactamase; beta-lactamase 5786036..5787238 Flavobacterium johnsoniae UW101 5089416 YP_001197107.1 CDS Fjoh_4789 NC_009441.1 5787834 5789597 R hypothetical protein complement(5787834..5789597) Flavobacterium johnsoniae UW101 5094134 YP_001197108.1 CDS Fjoh_4790 NC_009441.1 5789609 5790583 R PFAM: FecR protein; FecR anti-FecI sigma factor complement(5789609..5790583) Flavobacterium johnsoniae UW101 5089418 YP_001197109.1 CDS Fjoh_4791 NC_009441.1 5790580 5791128 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(5790580..5791128) Flavobacterium johnsoniae UW101 5089419 YP_001197110.1 CDS Fjoh_4792 NC_009441.1 5791219 5791407 R hypothetical protein complement(5791219..5791407) Flavobacterium johnsoniae UW101 5089420 YP_001197111.1 CDS Fjoh_4793 NC_009441.1 5791425 5791730 R hypothetical protein complement(5791425..5791730) Flavobacterium johnsoniae UW101 5089421 YP_001197112.1 CDS Fjoh_4794 NC_009441.1 5791934 5793226 R hypothetical protein complement(5791934..5793226) Flavobacterium johnsoniae UW101 5089422 YP_001197113.1 CDS Fjoh_4795 NC_009441.1 5793230 5795455 R PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin processing; SMART: AAA ATPase; ABC transporter-like protein complement(5793230..5795455) Flavobacterium johnsoniae UW101 5089423 YP_001197114.1 CDS Fjoh_4796 NC_009441.1 5795467 5796297 R hypothetical protein complement(5795467..5796297) Flavobacterium johnsoniae UW101 5089424 YP_001197115.1 CDS Fjoh_4797 NC_009441.1 5796309 5797865 R PFAM: Vitamin K epoxide reductase; vitamin K epoxide reductase complement(5796309..5797865) Flavobacterium johnsoniae UW101 5089425 YP_001197116.1 CDS Fjoh_4798 NC_009441.1 5798637 5798990 D PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 5798637..5798990 Flavobacterium johnsoniae UW101 5089426 YP_001197117.1 CDS Fjoh_4799 NC_009441.1 5799423 5800832 D TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 5799423..5800832 Flavobacterium johnsoniae UW101 5089427 YP_001197118.1 CDS Fjoh_4800 NC_009441.1 5800866 5802395 D TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 5800866..5802395 Flavobacterium johnsoniae UW101 5089428 YP_001197119.1 CDS Fjoh_4801 NC_009441.1 5802379 5803095 D TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; 6-phosphogluconolactonase 5802379..5803095 Flavobacterium johnsoniae UW101 5089429 YP_001197120.1 CDS Fjoh_4802 NC_009441.1 5803426 5804649 D hypothetical protein 5803426..5804649 Flavobacterium johnsoniae UW101 5089430 YP_001197121.1 CDS Fjoh_4803 NC_009441.1 5804640 5805671 D hypothetical protein 5804640..5805671 Flavobacterium johnsoniae UW101 5089431 YP_001197122.1 CDS Fjoh_4804 NC_009441.1 5805762 5806874 R PFAM: acyltransferase 3; acyltransferase complement(5805762..5806874) Flavobacterium johnsoniae UW101 5089432 YP_001197123.1 CDS Fjoh_4805 NC_009441.1 5806923 5808329 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(5806923..5808329) Flavobacterium johnsoniae UW101 5089433 YP_001197124.1 CDS Fjoh_4806 NC_009441.1 5809230 5810369 R PFAM: uncharacterised conserved protein UCP016719; hypothetical protein complement(5809230..5810369) Flavobacterium johnsoniae UW101 5089434 YP_001197125.1 CDS Fjoh_4807 NC_009441.1 5810663 5811967 R PFAM: beta-lactamase; beta-lactamase complement(5810663..5811967) Flavobacterium johnsoniae UW101 5089435 YP_001197126.1 CDS Fjoh_4808 NC_009441.1 5811971 5814475 R PFAM: glycoside hydrolase, family 20; beta-N-acetylhexosaminidase complement(5811971..5814475) Flavobacterium johnsoniae UW101 5089436 YP_001197127.1 CDS Fjoh_4809 NC_009441.1 5814488 5815969 R PFAM: protein of unknown function DUF187; hypothetical protein complement(5814488..5815969) Flavobacterium johnsoniae UW101 5089437 YP_001197128.1 CDS Fjoh_4810 NC_009441.1 5816251 5817072 R PFAM: esterase; esterase complement(5816251..5817072) Flavobacterium johnsoniae UW101 5089438 YP_001197129.1 CDS Fjoh_4811 NC_009441.1 5817211 5820126 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD linked oxidase domain protein; D-lactate dehydrogenase complement(5817211..5820126) Flavobacterium johnsoniae UW101 5089439 YP_001197130.1 CDS Fjoh_4812 NC_009441.1 5820361 5822289 R TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate deaminase complement(5820361..5822289) Flavobacterium johnsoniae UW101 5089440 YP_001197131.1 CDS Fjoh_4813 NC_009441.1 5822483 5823178 R PFAM: regulatory protein, DeoR; DeoR family transcriptional regulator complement(5822483..5823178) Flavobacterium johnsoniae UW101 5089441 YP_001197132.1 CDS Fjoh_4814 NC_009441.1 5823423 5826710 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 5823423..5826710 Flavobacterium johnsoniae UW101 5089442 YP_001197133.1 CDS Fjoh_4815 NC_009441.1 5826735 5828468 D PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5826735..5828468 Flavobacterium johnsoniae UW101 5089443 YP_001197134.1 CDS Fjoh_4816 NC_009441.1 5828726 5829925 D PFAM: uncharacterised conserved protein UCP016719; hypothetical protein 5828726..5829925 Flavobacterium johnsoniae UW101 5089444 YP_001197135.1 CDS murQ NC_009441.1 5830057 5830884 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 5830057..5830884 Flavobacterium johnsoniae UW101 5089445 YP_001197136.1 CDS Fjoh_4818 NC_009441.1 5831213 5832718 D PFAM: Na+/solute symporter; Na+/solute symporter 5831213..5832718 Flavobacterium johnsoniae UW101 5089446 YP_001197137.1 CDS Fjoh_4819 NC_009441.1 5832796 5835789 D PFAM: beta-lactamase; glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 protein 5832796..5835789 Flavobacterium johnsoniae UW101 5089447 YP_001197138.1 CDS Fjoh_4820 NC_009441.1 5835873 5837144 D hypothetical protein 5835873..5837144 Flavobacterium johnsoniae UW101 5089448 YP_001197139.1 CDS Fjoh_4821 NC_009441.1 5837252 5839117 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(5837252..5839117) Flavobacterium johnsoniae UW101 5089449 YP_001197140.1 CDS Fjoh_4822 NC_009441.1 5839184 5840674 D PFAM: regulatory protein GntR, HTH; GntR family transcriptional regulator 5839184..5840674 Flavobacterium johnsoniae UW101 5089450 YP_001197141.1 CDS Fjoh_4823 NC_009441.1 5840725 5841603 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 5840725..5841603 Flavobacterium johnsoniae UW101 5089451 YP_001197142.1 CDS Fjoh_4824 NC_009441.1 5841678 5842508 D PFAM: dihydrodipicolinate reductase; NmrA family protein; NmrA family protein 5841678..5842508 Flavobacterium johnsoniae UW101 5089452 YP_001197143.1 CDS Fjoh_4825 NC_009441.1 5842514 5842909 D hypothetical protein 5842514..5842909 Flavobacterium johnsoniae UW101 5089453 YP_001197144.1 CDS Fjoh_4826 NC_009441.1 5843235 5844125 D PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 5843235..5844125 Flavobacterium johnsoniae UW101 5089454 YP_001197145.1 CDS Fjoh_4827 NC_009441.1 5844194 5846440 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5844194..5846440) Flavobacterium johnsoniae UW101 5089455 YP_001197146.1 CDS Fjoh_4828 NC_009441.1 5846470 5847732 R hypothetical protein complement(5846470..5847732) Flavobacterium johnsoniae UW101 5089456 YP_001197147.1 CDS Fjoh_4829 NC_009441.1 5847767 5848627 R PFAM: Urea transporter; Urea transporter complement(5847767..5848627) Flavobacterium johnsoniae UW101 5089457 YP_001197148.1 CDS Fjoh_4830 NC_009441.1 5848640 5849341 R hypothetical protein complement(5848640..5849341) Flavobacterium johnsoniae UW101 5089458 YP_001197149.1 CDS Fjoh_4831 NC_009441.1 5849342 5850175 R PFAM: Urease accessory protein UreD; urease accessory protein UreD complement(5849342..5850175) Flavobacterium johnsoniae UW101 5089459 YP_001197150.1 CDS Fjoh_4832 NC_009441.1 5850209 5850847 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; urease accessory protein UreG complement(5850209..5850847) Flavobacterium johnsoniae UW101 5089460 YP_001197151.1 CDS Fjoh_4833 NC_009441.1 5850918 5851604 R PFAM: Urease accessory protein UreF; urease accessory protein UreF complement(5850918..5851604) Flavobacterium johnsoniae UW101 5089461 YP_001197152.1 CDS ureE NC_009441.1 5851634 5852131 R involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE complement(5851634..5852131) Flavobacterium johnsoniae UW101 5089462 YP_001197153.1 CDS ureC NC_009441.1 5852281 5854002 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(5852281..5854002) Flavobacterium johnsoniae UW101 5089463 YP_001197154.1 CDS Fjoh_4836 NC_009441.1 5854005 5854373 R TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit; urease subunit beta complement(5854005..5854373) Flavobacterium johnsoniae UW101 5089464 YP_001197155.1 CDS ureA NC_009441.1 5854392 5854694 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(5854392..5854694) Flavobacterium johnsoniae UW101 5089465 YP_001197156.1 CDS Fjoh_4838 NC_009441.1 5854887 5855276 R hypothetical protein complement(5854887..5855276) Flavobacterium johnsoniae UW101 5089466 YP_001197157.1 CDS Fjoh_4839 NC_009441.1 5855576 5856319 D hypothetical protein 5855576..5856319 Flavobacterium johnsoniae UW101 5089467 YP_001197158.1 CDS Fjoh_4840 NC_009441.1 5856397 5857833 R PFAM: glycosyl transferase, family 2; chitin synthase; hyaluronan synthase complement(5856397..5857833) Flavobacterium johnsoniae UW101 5089468 YP_001197159.1 CDS Fjoh_4841 NC_009441.1 5858384 5858833 D PFAM: response regulator receiver; response regulator receiver protein 5858384..5858833 Flavobacterium johnsoniae UW101 5089469 YP_001197160.1 CDS Fjoh_4842 NC_009441.1 5858845 5862864 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 5858845..5862864 Flavobacterium johnsoniae UW101 5089470 YP_001197161.1 CDS Fjoh_4843 NC_009441.1 5862943 5863359 R hypothetical protein complement(5862943..5863359) Flavobacterium johnsoniae UW101 5094281 YP_001197162.1 CDS Fjoh_4844 NC_009441.1 5863493 5864602 R hypothetical protein complement(5863493..5864602) Flavobacterium johnsoniae UW101 5094282 YP_001197163.1 CDS Fjoh_4845 NC_009441.1 5865218 5866924 D PFAM: ATP-binding region, ATPase domain protein domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; signal transduction histidine kinase 5865218..5866924 Flavobacterium johnsoniae UW101 5094283 YP_001197164.1 CDS Fjoh_4846 NC_009441.1 5866931 5867599 D PFAM: response regulator receiver; response regulator receiver protein 5866931..5867599 Flavobacterium johnsoniae UW101 5094284 YP_001197165.1 CDS Fjoh_4847 NC_009441.1 5867985 5868266 D hypothetical protein 5867985..5868266 Flavobacterium johnsoniae UW101 5094285 YP_001197166.1 CDS Fjoh_4848 NC_009441.1 5868358 5868882 D hypothetical protein 5868358..5868882 Flavobacterium johnsoniae UW101 5094286 YP_001197167.1 CDS Fjoh_4849 NC_009441.1 5868879 5870123 D hypothetical protein 5868879..5870123 Flavobacterium johnsoniae UW101 5094287 YP_001197168.1 CDS Fjoh_4850 NC_009441.1 5870107 5871651 D hypothetical protein 5870107..5871651 Flavobacterium johnsoniae UW101 5094288 YP_001197169.1 CDS Fjoh_4851 NC_009441.1 5871655 5873397 D hypothetical protein 5871655..5873397 Flavobacterium johnsoniae UW101 5094289 YP_001197170.1 CDS Fjoh_4852 NC_009441.1 5873400 5873909 D hypothetical protein 5873400..5873909 Flavobacterium johnsoniae UW101 5094290 YP_001197171.1 CDS Fjoh_4853 NC_009441.1 5874021 5874227 D hypothetical protein 5874021..5874227 Flavobacterium johnsoniae UW101 5094291 YP_001197172.1 CDS Fjoh_4854 NC_009441.1 5874354 5874719 D hypothetical protein 5874354..5874719 Flavobacterium johnsoniae UW101 5094292 YP_001197173.1 CDS Fjoh_4855 NC_009441.1 5874757 5875167 D hypothetical protein 5874757..5875167 Flavobacterium johnsoniae UW101 5094293 YP_001197174.1 CDS Fjoh_4856 NC_009441.1 5875178 5875387 D hypothetical protein 5875178..5875387 Flavobacterium johnsoniae UW101 5094294 YP_001197175.1 CDS Fjoh_4857 NC_009441.1 5875598 5876950 D PFAM: glycoside hydrolase, family 1; beta-glucosidase 5875598..5876950 Flavobacterium johnsoniae UW101 5094295 YP_001197176.1 CDS Fjoh_4858 NC_009441.1 5878198 5879952 D PFAM: ATP-binding region, ATPase domain protein domain protein; signal transduction histidine kinase 5878198..5879952 Flavobacterium johnsoniae UW101 5094296 YP_001197177.1 CDS Fjoh_4859 NC_009441.1 5880027 5880560 R PFAM: 5 nucleotidase, deoxy, cytosolic type C; 5' nucleotidase complement(5880027..5880560) Flavobacterium johnsoniae UW101 5094297 YP_001197178.1 CDS Fjoh_4860 NC_009441.1 5880586 5881398 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; DeoR family transcriptional regulator 5880586..5881398 Flavobacterium johnsoniae UW101 5094298 YP_001197179.1 CDS Fjoh_4861 NC_009441.1 5881471 5882910 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein complement(5881471..5882910) Flavobacterium johnsoniae UW101 5094299 YP_001197180.1 CDS Fjoh_4862 NC_009441.1 5882903 5886070 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(5882903..5886070) Flavobacterium johnsoniae UW101 5094300 YP_001197181.1 CDS Fjoh_4863 NC_009441.1 5886105 5887187 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(5886105..5887187) Flavobacterium johnsoniae UW101 5094301 YP_001197182.1 CDS Fjoh_4864 NC_009441.1 5887362 5887739 R hypothetical protein complement(5887362..5887739) Flavobacterium johnsoniae UW101 5094302 YP_001197183.1 CDS Fjoh_4865 NC_009441.1 5887908 5888315 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(5887908..5888315) Flavobacterium johnsoniae UW101 5094303 YP_001197184.1 CDS Fjoh_4866 NC_009441.1 5888434 5889051 R hypothetical protein complement(5888434..5889051) Flavobacterium johnsoniae UW101 5094304 YP_001197185.1 CDS Fjoh_4867 NC_009441.1 5889209 5889601 R hypothetical protein complement(5889209..5889601) Flavobacterium johnsoniae UW101 5094305 YP_001197186.1 CDS Fjoh_4868 NC_009441.1 5889619 5891490 R aminopeptidase N-like protein complement(5889619..5891490) Flavobacterium johnsoniae UW101 5094306 YP_001197187.1 CDS Fjoh_4869 NC_009441.1 5891706 5893286 R PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase complement(5891706..5893286) Flavobacterium johnsoniae UW101 5094307 YP_001197188.1 CDS Fjoh_4870 NC_009441.1 5893360 5893671 R PFAM: Rhodanese domain protein; rhodanese domain-containing protein complement(5893360..5893671) Flavobacterium johnsoniae UW101 5094308 YP_001197189.1 CDS Fjoh_4871 NC_009441.1 5894073 5894699 D PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator 5894073..5894699 Flavobacterium johnsoniae UW101 5094309 YP_001197190.1 CDS Fjoh_4872 NC_009441.1 5895009 5895794 D PFAM: protein of unknown function DUF81; hypothetical protein 5895009..5895794 Flavobacterium johnsoniae UW101 5094310 YP_001197191.1 CDS Fjoh_4873 NC_009441.1 5895949 5896398 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(5895949..5896398) Flavobacterium johnsoniae UW101 5094311 YP_001197192.1 CDS Fjoh_4874 NC_009441.1 5896577 5896978 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(5896577..5896978) Flavobacterium johnsoniae UW101 5094312 YP_001197193.1 CDS Fjoh_4875 NC_009441.1 5897105 5897542 R hypothetical protein complement(5897105..5897542) Flavobacterium johnsoniae UW101 5094313 YP_001197194.1 CDS Fjoh_4876 NC_009441.1 5897543 5897992 R phage-associated protein complement(5897543..5897992) Flavobacterium johnsoniae UW101 5094314 YP_001197195.1 CDS Fjoh_4877 NC_009441.1 5898160 5899935 R SMART: AAA ATPase; ATPase AAA complement(5898160..5899935) Flavobacterium johnsoniae UW101 5094315 YP_001197196.1 CDS Fjoh_4878 NC_009441.1 5899981 5901057 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(5899981..5901057) Flavobacterium johnsoniae UW101 5094316 YP_001197197.1 CDS Fjoh_4879 NC_009441.1 5901060 5902445 R PFAM: cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(5901060..5902445) Flavobacterium johnsoniae UW101 5094317 YP_001197198.1 CDS Fjoh_4880 NC_009441.1 5902705 5903373 R PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase complement(5902705..5903373) Flavobacterium johnsoniae UW101 5094318 YP_001197199.1 CDS Fjoh_4881 NC_009441.1 5903499 5904914 D PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; beta-lactamase domain-containing protein 5903499..5904914 Flavobacterium johnsoniae UW101 5094319 YP_001197200.1 CDS Fjoh_4882 NC_009441.1 5905002 5905565 D PFAM: protein of unknown function DUF395, YeeE/YedE; hypothetical protein 5905002..5905565 Flavobacterium johnsoniae UW101 5094320 YP_001197201.1 CDS Fjoh_4883 NC_009441.1 5905576 5906055 D PFAM: protein of unknown function DUF395, YeeE/YedE; hypothetical protein 5905576..5906055 Flavobacterium johnsoniae UW101 5094321 YP_001197202.1 CDS Fjoh_4884 NC_009441.1 5906076 5906594 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5906076..5906594 Flavobacterium johnsoniae UW101 5094322 YP_001197203.1 CDS Fjoh_4885 NC_009441.1 5906896 5908473 D PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase 5906896..5908473 Flavobacterium johnsoniae UW101 5094323 YP_001197204.1 CDS Fjoh_4886 NC_009441.1 5908763 5909224 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 5908763..5909224 Flavobacterium johnsoniae UW101 5094324 YP_001197205.1 CDS Fjoh_4887 NC_009441.1 5909229 5909861 D PFAM: nitroreductase; nitroreductase 5909229..5909861 Flavobacterium johnsoniae UW101 5094325 YP_001197206.1 CDS Fjoh_4888 NC_009441.1 5909894 5910460 D hypothetical protein 5909894..5910460 Flavobacterium johnsoniae UW101 5094326 YP_001197207.1 CDS Fjoh_4889 NC_009441.1 5910666 5911943 D hypothetical protein 5910666..5911943 Flavobacterium johnsoniae UW101 5094327 YP_001197208.1 CDS Fjoh_4890 NC_009441.1 5912193 5913644 D PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; anthranilate synthase 5912193..5913644 Flavobacterium johnsoniae UW101 5094328 YP_001197209.1 CDS Fjoh_4891 NC_009441.1 5913720 5914163 D hypothetical protein 5913720..5914163 Flavobacterium johnsoniae UW101 5094329 YP_001197210.1 CDS Fjoh_4892 NC_009441.1 5914252 5914818 D TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase 5914252..5914818 Flavobacterium johnsoniae UW101 5094330 YP_001197211.1 CDS Fjoh_4893 NC_009441.1 5914960 5915952 D TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase, family 3; anthranilate phosphoribosyltransferase 5914960..5915952 Flavobacterium johnsoniae UW101 5094331 YP_001197212.1 CDS Fjoh_4894 NC_009441.1 5915998 5916777 D PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 5915998..5916777 Flavobacterium johnsoniae UW101 5094332 YP_001197213.1 CDS Fjoh_4895 NC_009441.1 5916871 5917503 D PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 5916871..5917503 Flavobacterium johnsoniae UW101 5094333 YP_001197214.1 CDS Fjoh_4896 NC_009441.1 5917515 5918696 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 5917515..5918696 Flavobacterium johnsoniae UW101 5094334 YP_001197215.1 CDS Fjoh_4897 NC_009441.1 5918766 5919086 D hypothetical protein 5918766..5919086 Flavobacterium johnsoniae UW101 5094335 YP_001197216.1 CDS Fjoh_4898 NC_009441.1 5919093 5919830 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 5919093..5919830 Flavobacterium johnsoniae UW101 5094336 YP_001197217.1 CDS trpA NC_009441.1 5920021 5920782 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 5920021..5920782 Flavobacterium johnsoniae UW101 5094169 YP_001197218.1 CDS Fjoh_4900 NC_009441.1 5920826 5922502 D PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 5920826..5922502 Flavobacterium johnsoniae UW101 5094170 YP_001197219.1 CDS Fjoh_4901 NC_009441.1 5922634 5923263 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 5922634..5923263 Flavobacterium johnsoniae UW101 5094171 YP_001197220.1 CDS Fjoh_4902 NC_009441.1 5923253 5924572 D PFAM: outer membrane efflux protein; outer membrane efflux protein 5923253..5924572 Flavobacterium johnsoniae UW101 5094172 YP_001197221.1 CDS Fjoh_4903 NC_009441.1 5924585 5925664 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 5924585..5925664 Flavobacterium johnsoniae UW101 5094173 YP_001197222.1 CDS Fjoh_4904 NC_009441.1 5925668 5927257 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 5925668..5927257 Flavobacterium johnsoniae UW101 5094174 YP_001197223.1 CDS Fjoh_4905 NC_009441.1 5927520 5928278 R PFAM: protein of unknown function DUF328; hypothetical protein complement(5927520..5928278) Flavobacterium johnsoniae UW101 5094175 YP_001197224.1 CDS Fjoh_4906 NC_009441.1 5928627 5930114 D TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; polynucleotide adenylyltransferase 5928627..5930114 Flavobacterium johnsoniae UW101 5094176 YP_001197225.1 CDS Fjoh_4907 NC_009441.1 5930130 5931155 D PFAM: cytochrome oxidase assembly; cytochrome oxidase assembly 5930130..5931155 Flavobacterium johnsoniae UW101 5094177 YP_001197226.1 CDS Fjoh_4908 NC_009441.1 5931425 5932192 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(5931425..5932192) Flavobacterium johnsoniae UW101 5094178 YP_001197227.1 CDS Fjoh_4909 NC_009441.1 5932231 5932599 R hypothetical protein complement(5932231..5932599) Flavobacterium johnsoniae UW101 5094179 YP_001197228.1 CDS Fjoh_4910 NC_009441.1 5932614 5932919 R hypothetical protein complement(5932614..5932919) Flavobacterium johnsoniae UW101 5094180 YP_001197229.1 CDS Fjoh_4911 NC_009441.1 5932922 5933251 R hypothetical protein complement(5932922..5933251) Flavobacterium johnsoniae UW101 5094181 YP_001197230.1 CDS Fjoh_4912 NC_009441.1 5933235 5933552 R hypothetical protein complement(5933235..5933552) Flavobacterium johnsoniae UW101 5094182 YP_001197231.1 CDS Fjoh_4913 NC_009441.1 5933555 5934892 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(5933555..5934892) Flavobacterium johnsoniae UW101 5094183 YP_001197232.1 CDS Fjoh_4914 NC_009441.1 5934911 5935531 R hypothetical protein complement(5934911..5935531) Flavobacterium johnsoniae UW101 5094184 YP_001197233.1 CDS Fjoh_4915 NC_009441.1 5935577 5935984 R hypothetical protein complement(5935577..5935984) Flavobacterium johnsoniae UW101 5094185 YP_001197234.1 CDS Fjoh_4916 NC_009441.1 5936393 5938552 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5936393..5938552) Flavobacterium johnsoniae UW101 5094186 YP_001197235.1 CDS Fjoh_4917 NC_009441.1 5938692 5939150 D hypothetical protein 5938692..5939150 Flavobacterium johnsoniae UW101 5094187 YP_001197236.1 CDS Fjoh_4918 NC_009441.1 5939343 5939918 D PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 5939343..5939918 Flavobacterium johnsoniae UW101 5094188 YP_001197237.1 CDS Fjoh_4919 NC_009441.1 5939918 5940307 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5939918..5940307 Flavobacterium johnsoniae UW101 5094189 YP_001197238.1 CDS Fjoh_4920 NC_009441.1 5940654 5941934 D PFAM: Cl- channel, voltage-gated family protein; Cl- channel, voltage-gated family protein 5940654..5941934 Flavobacterium johnsoniae UW101 5094190 YP_001197239.1 CDS Fjoh_4921 NC_009441.1 5942022 5942621 D PFAM: HPP family protein; HPP family protein 5942022..5942621 Flavobacterium johnsoniae UW101 5094191 YP_001197240.1 CDS Fjoh_4922 NC_009441.1 5942815 5943357 D hypothetical protein 5942815..5943357 Flavobacterium johnsoniae UW101 5094192 YP_001197241.1 CDS Fjoh_4923 NC_009441.1 5943474 5943833 D PFAM: S23 ribosomal protein; S23 ribosomal protein 5943474..5943833 Flavobacterium johnsoniae UW101 5094193 YP_001197242.1 CDS Fjoh_4924 NC_009441.1 5943877 5944935 D hypothetical protein 5943877..5944935 Flavobacterium johnsoniae UW101 5094194 YP_001197243.1 CDS Fjoh_4925 NC_009441.1 5945019 5945600 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(5945019..5945600) Flavobacterium johnsoniae UW101 5094195 YP_001197244.1 CDS Fjoh_4926 NC_009441.1 5945673 5946425 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(5945673..5946425) Flavobacterium johnsoniae UW101 5094196 YP_001197245.1 CDS Fjoh_4927 NC_009441.1 5946657 5949026 D hypothetical protein 5946657..5949026 Flavobacterium johnsoniae UW101 5094197 YP_001197246.1 CDS Fjoh_4928 NC_009441.1 5949156 5950331 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(5949156..5950331) Flavobacterium johnsoniae UW101 5094198 YP_001197247.1 CDS Fjoh_4929 NC_009441.1 5950358 5954089 D PFAM: metallophosphoesterase; metallophosphoesterase 5950358..5954089 Flavobacterium johnsoniae UW101 5094199 YP_001197248.1 CDS Fjoh_4930 NC_009441.1 5954216 5955076 R hypothetical protein complement(5954216..5955076) Flavobacterium johnsoniae UW101 5094200 YP_001197249.1 CDS Fjoh_4931 NC_009441.1 5955167 5956219 R hypothetical protein complement(5955167..5956219) Flavobacterium johnsoniae UW101 5094201 YP_001197250.1 CDS Fjoh_4932 NC_009441.1 5956327 5957235 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5956327..5957235 Flavobacterium johnsoniae UW101 5094202 YP_001197251.1 CDS Fjoh_4933 NC_009441.1 5957243 5958079 D hypothetical protein 5957243..5958079 Flavobacterium johnsoniae UW101 5094203 YP_001197252.1 CDS Fjoh_4934 NC_009441.1 5958093 5960417 D hypothetical protein 5958093..5960417 Flavobacterium johnsoniae UW101 5094204 YP_001197253.1 CDS Fjoh_4935 NC_009441.1 5960533 5962329 R TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; GTP-binding protein TypA complement(5960533..5962329) Flavobacterium johnsoniae UW101 5094205 YP_001197254.1 CDS Fjoh_4936 NC_009441.1 5962498 5964207 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 5962498..5964207 Flavobacterium johnsoniae UW101 5094206 YP_001197255.1 CDS Fjoh_4937 NC_009441.1 5964215 5964625 D PFAM: response regulator receiver; response regulator receiver protein 5964215..5964625 Flavobacterium johnsoniae UW101 5094207 YP_001197256.1 CDS rpsT NC_009441.1 5964785 5965036 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(5964785..5965036) Flavobacterium johnsoniae UW101 5094208 YP_001197257.1 CDS Fjoh_4939 NC_009441.1 5965457 5966935 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(5965457..5966935) Flavobacterium johnsoniae UW101 5094136 YP_001197258.1 CDS Fjoh_4940 NC_009441.1 5967038 5968075 D hypothetical protein 5967038..5968075 Flavobacterium johnsoniae UW101 5094210 YP_001197259.1 CDS Fjoh_4941 NC_009441.1 5968125 5969630 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 5968125..5969630 Flavobacterium johnsoniae UW101 5094211 YP_001197260.1 CDS Fjoh_4942 NC_009441.1 5969791 5971104 D TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 5969791..5971104 Flavobacterium johnsoniae UW101 5094212 YP_001197261.1 CDS Fjoh_4943 NC_009441.1 5971146 5971694 D hypothetical protein 5971146..5971694 Flavobacterium johnsoniae UW101 5094213 YP_001197262.1 CDS Fjoh_4944 NC_009441.1 5971726 5972631 D PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 5971726..5972631 Flavobacterium johnsoniae UW101 5094214 YP_001197263.1 CDS Fjoh_4945 NC_009441.1 5973048 5974139 R hypothetical protein complement(5973048..5974139) Flavobacterium johnsoniae UW101 5094215 YP_001197264.1 CDS Fjoh_4946 NC_009441.1 5974734 5975702 R PFAM: glycoside hydrolase, family 5; cellulase complement(5974734..5975702) Flavobacterium johnsoniae UW101 5094216 YP_001197265.1 CDS Fjoh_4947 NC_009441.1 5975713 5976948 R PFAM: glycoside hydrolase, clan GH-D; alpha-galactosidase complement(5975713..5976948) Flavobacterium johnsoniae UW101 5094217 YP_001197266.1 CDS Fjoh_4948 NC_009441.1 5977067 5978029 R hypothetical protein complement(5977067..5978029) Flavobacterium johnsoniae UW101 5094218 YP_001197267.1 CDS Fjoh_4949 NC_009441.1 5978225 5979262 R hypothetical protein complement(5978225..5979262) Flavobacterium johnsoniae UW101 5094219 YP_001197268.1 CDS Fjoh_4950 NC_009441.1 5979282 5980880 R PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5979282..5980880) Flavobacterium johnsoniae UW101 5094220 YP_001197269.1 CDS Fjoh_4951 NC_009441.1 5980894 5984085 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(5980894..5984085) Flavobacterium johnsoniae UW101 5094221 YP_001197270.1 CDS Fjoh_4952 NC_009441.1 5984397 5985275 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(5984397..5985275) Flavobacterium johnsoniae UW101 5094222 YP_001197271.1 CDS Fjoh_4953 NC_009441.1 5985582 5986712 D PFAM: glycoside hydrolase, family 26; glycoside hydrolase 5985582..5986712 Flavobacterium johnsoniae UW101 5094223 YP_001197272.1 CDS Fjoh_4954 NC_009441.1 5986757 5988148 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; sugar (glycoside-Pentoside-hexuronide) transporter 5986757..5988148 Flavobacterium johnsoniae UW101 5094224 YP_001197273.1 CDS Fjoh_4955 NC_009441.1 5988180 5989370 D PFAM: glycosidase, PH1107-related; PH1107-like glycosidase 5988180..5989370 Flavobacterium johnsoniae UW101 5094225 YP_001197274.1 CDS Fjoh_4956 NC_009441.1 5989377 5990567 D PFAM: N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase 5989377..5990567 Flavobacterium johnsoniae UW101 5094226 YP_001197275.1 CDS Fjoh_4957 NC_009441.1 5990573 5991802 D PFAM: glycoside hydrolase, family 26; Mannan endo-1,4-beta-mannosidase 5990573..5991802 Flavobacterium johnsoniae UW101 5094227 YP_001197276.1 CDS Fjoh_4958 NC_009441.1 5991950 5993239 D endo-beta-mannanase-like protein 5991950..5993239 Flavobacterium johnsoniae UW101 5094228 YP_001197277.1 CDS Fjoh_4959 NC_009441.1 5993514 5995493 D hypothetical protein 5993514..5995493 Flavobacterium johnsoniae UW101 5094229 YP_001197278.1 CDS Fjoh_4960 NC_009441.1 5995634 5996590 R PFAM: aldo/keto reductase; aldo/keto reductase complement(5995634..5996590) Flavobacterium johnsoniae UW101 5094230 YP_001197279.1 CDS Fjoh_4961 NC_009441.1 5996762 5996992 D PFAM: protein of unknown function DUF433; hypothetical protein 5996762..5996992 Flavobacterium johnsoniae UW101 5094231 YP_001197280.1 CDS Fjoh_4962 NC_009441.1 5996992 5997327 D hypothetical protein 5996992..5997327 Flavobacterium johnsoniae UW101 5094232 YP_001197281.1 CDS Fjoh_4963 NC_009441.1 5997566 5999863 R PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 protein complement(5997566..5999863) Flavobacterium johnsoniae UW101 5094233 YP_001197282.1 CDS Fjoh_4964 NC_009441.1 6000257 6001636 R PFAM: protein of unknown function DUF303, acetylesterase; sialate O-acetylesterase complement(6000257..6001636) Flavobacterium johnsoniae UW101 5094234 YP_001197283.1 CDS Fjoh_4965 NC_009441.1 6001626 6002726 R PFAM: lipolytic enzyme, G-D-S-L family; GDSL family lipase complement(6001626..6002726) Flavobacterium johnsoniae UW101 5094235 YP_001197284.1 CDS Fjoh_4966 NC_009441.1 6002947 6003456 D PFAM: NLP/P60 protein; NLP/P60 protein 6002947..6003456 Flavobacterium johnsoniae UW101 5094236 YP_001197285.1 CDS Fjoh_4967 NC_009441.1 6003584 6005155 R hypothetical protein complement(6003584..6005155) Flavobacterium johnsoniae UW101 5094237 YP_001197286.1 CDS Fjoh_4968 NC_009441.1 6005301 6005717 R PFAM: protein of unknown function DUF1573; hypothetical protein complement(6005301..6005717) Flavobacterium johnsoniae UW101 5094238 YP_001197287.1 CDS Fjoh_4969 NC_009441.1 6005881 6007149 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 6005881..6007149 Flavobacterium johnsoniae UW101 5094239 YP_001197288.1 CDS Fjoh_4970 NC_009441.1 6007146 6007832 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 6007146..6007832 Flavobacterium johnsoniae UW101 5094240 YP_001197289.1 CDS Fjoh_4971 NC_009441.1 6007920 6008687 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 6007920..6008687 Flavobacterium johnsoniae UW101 5094241 YP_001197290.1 CDS Fjoh_4972 NC_009441.1 6008682 6010898 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(6008682..6010898) Flavobacterium johnsoniae UW101 5094242 YP_001197291.1 CDS Fjoh_4973 NC_009441.1 6011048 6012325 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator transporter complement(6011048..6012325) Flavobacterium johnsoniae UW101 5094243 YP_001197292.1 CDS Fjoh_4974 NC_009441.1 6012597 6014186 D hypothetical protein 6012597..6014186 Flavobacterium johnsoniae UW101 5094244 YP_001197293.1 CDS Fjoh_4975 NC_009441.1 6014301 6015572 D hypothetical protein 6014301..6015572 Flavobacterium johnsoniae UW101 5094245 YP_001197294.1 CDS Fjoh_4976 NC_009441.1 6015716 6016135 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 6015716..6016135 Flavobacterium johnsoniae UW101 5094246 YP_001197295.1 CDS Fjoh_4977 NC_009441.1 6016277 6016573 R hypothetical protein complement(6016277..6016573) Flavobacterium johnsoniae UW101 5094247 YP_001197296.1 CDS Fjoh_4978 NC_009441.1 6016554 6016994 R hypothetical protein complement(6016554..6016994) Flavobacterium johnsoniae UW101 5094248 YP_001197297.1 CDS Fjoh_4979 NC_009441.1 6017228 6018298 D PFAM: beta-lactamase; beta-lactamase 6017228..6018298 Flavobacterium johnsoniae UW101 5094249 YP_001197298.1 CDS Fjoh_4980 NC_009441.1 6018556 6019509 R TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY complement(6018556..6019509) Flavobacterium johnsoniae UW101 5094250 YP_001197299.1 CDS Fjoh_4981 NC_009441.1 6019775 6019927 R hypothetical protein complement(6019775..6019927) Flavobacterium johnsoniae UW101 5094251 YP_001197300.1 CDS rpmG NC_009441.1 6020003 6020185 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(6020003..6020185) Flavobacterium johnsoniae UW101 5094252 YP_001197301.1 CDS rpmB NC_009441.1 6020213 6020449 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(6020213..6020449) Flavobacterium johnsoniae UW101 5094253 YP_001197302.1 CDS Fjoh_4984 NC_009441.1 6020521 6021774 R TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; competence/damage-inducible protein CinA complement(6020521..6021774) Flavobacterium johnsoniae UW101 5094254 YP_001197303.1 CDS Fjoh_4985 NC_009441.1 6021936 6022280 R hypothetical protein complement(6021936..6022280) Flavobacterium johnsoniae UW101 5094255 YP_001197304.1 CDS Fjoh_4986 NC_009441.1 6022280 6022891 R PFAM: fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(6022280..6022891) Flavobacterium johnsoniae UW101 5094256 YP_001197305.1 CDS Fjoh_4987 NC_009441.1 6022977 6023747 R PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; exonuclease complement(6022977..6023747) Flavobacterium johnsoniae UW101 5094257 YP_001197306.1 CDS Fjoh_4988 NC_009441.1 6023954 6025309 R PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; dehydrogenase catalytic domain-containing protein complement(6023954..6025309) Flavobacterium johnsoniae UW101 5094258 YP_001197307.1 CDS Fjoh_4989 NC_009441.1 6025393 6026556 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(6025393..6026556) Flavobacterium johnsoniae UW101 5094259 YP_001197308.1 CDS Fjoh_4990 NC_009441.1 6026587 6027723 R hypothetical protein complement(6026587..6027723) Flavobacterium johnsoniae UW101 5094260 YP_001197309.1 CDS Fjoh_4991 NC_009441.1 6027889 6028479 D hypothetical protein 6027889..6028479 Flavobacterium johnsoniae UW101 5094261 YP_001197310.1 CDS Fjoh_4992 NC_009441.1 6028554 6029741 R hypothetical protein complement(6028554..6029741) Flavobacterium johnsoniae UW101 5094262 YP_001197311.1 CDS Fjoh_4993 NC_009441.1 6029867 6030604 D PFAM: PHP C-terminal domain protein; phosphotransferase domain-containing protein 6029867..6030604 Flavobacterium johnsoniae UW101 5094263 YP_001197312.1 CDS Fjoh_4994 NC_009441.1 6030601 6032013 R PFAM: sugar transferase; UDP-phosphate galactose phosphotransferase complement(6030601..6032013) Flavobacterium johnsoniae UW101 5094264 YP_001197313.1 CDS Fjoh_4995 NC_009441.1 6032139 6033110 D hypothetical protein 6032139..6033110 Flavobacterium johnsoniae UW101 5094265 YP_001197314.1 CDS Fjoh_4996 NC_009441.1 6033202 6035064 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 6033202..6035064 Flavobacterium johnsoniae UW101 5094266 YP_001197315.1 CDS Fjoh_4997 NC_009441.1 6035158 6035688 D PFAM: peptidylprolyl isomerase, FKBP-type; FKBP type peptidyl-prolyl cis-trans isomerase 6035158..6035688 Flavobacterium johnsoniae UW101 5094267 YP_001197316.1 CDS Fjoh_4998 NC_009441.1 6035708 6036487 D O-methyltransferase-like protein 6035708..6036487 Flavobacterium johnsoniae UW101 5094268 YP_001197317.1 CDS Fjoh_4999 NC_009441.1 6036663 6037064 D hypothetical protein 6036663..6037064 Flavobacterium johnsoniae UW101 5094269 YP_001197318.1 CDS Fjoh_5000 NC_009441.1 6037413 6038072 R hypothetical protein complement(6037413..6038072) Flavobacterium johnsoniae UW101 5094270 YP_001197319.1 CDS Fjoh_5001 NC_009441.1 6038363 6039055 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 6038363..6039055 Flavobacterium johnsoniae UW101 5094271 YP_001197320.1 CDS Fjoh_5002 NC_009441.1 6039169 6039738 D TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; ATP--cobalamin adenosyltransferase 6039169..6039738 Flavobacterium johnsoniae UW101 5094272 YP_001197321.1 CDS Fjoh_5003 NC_009441.1 6039956 6040177 D hypothetical protein 6039956..6040177 Flavobacterium johnsoniae UW101 5094273 YP_001197322.1 CDS secA NC_009441.1 6040265 6043609 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 6040265..6043609 Flavobacterium johnsoniae UW101 5094274 YP_001197323.1 CDS Fjoh_5005 NC_009441.1 6043805 6044209 D hypothetical protein 6043805..6044209 Flavobacterium johnsoniae UW101 5094275 YP_001197324.1 CDS Fjoh_5006 NC_009441.1 6044322 6045122 D hypothetical protein 6044322..6045122 Flavobacterium johnsoniae UW101 5094276 YP_001197325.1 CDS Fjoh_5007 NC_009441.1 6045288 6046331 D PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 6045288..6046331 Flavobacterium johnsoniae UW101 5094277 YP_001197326.1 CDS Fjoh_5008 NC_009441.1 6046414 6047373 D hypothetical protein 6046414..6047373 Flavobacterium johnsoniae UW101 5094278 YP_001197327.1 CDS Fjoh_5009 NC_009441.1 6047475 6048137 R PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(6047475..6048137) Flavobacterium johnsoniae UW101 5094279 YP_001197328.1 CDS Fjoh_5010 NC_009441.1 6048200 6049168 R hypothetical protein complement(6048200..6049168) Flavobacterium johnsoniae UW101 5094280 YP_001197329.1 CDS Fjoh_5011 NC_009441.1 6049180 6049863 R PFAM: Aspartyl/Asparaginyl beta-hydroxylase; aspartyl/asparaginyl beta-hydroxylase complement(6049180..6049863) Flavobacterium johnsoniae UW101 5092155 YP_001197330.1 CDS Fjoh_5012 NC_009441.1 6049987 6050511 R PFAM: adenylylsulfate kinase; adenylylsulfate kinase complement(6049987..6050511) Flavobacterium johnsoniae UW101 5092156 YP_001197331.1 CDS Fjoh_5013 NC_009441.1 6050678 6051379 D PFAM: Silent information regulator protein Sir2; silent information regulator protein Sir2 6050678..6051379 Flavobacterium johnsoniae UW101 5092157 YP_001197332.1 CDS Fjoh_5014 NC_009441.1 6051376 6052068 D sterol desaturase-like protein 6051376..6052068 Flavobacterium johnsoniae UW101 5092158 YP_001197333.1 CDS Fjoh_5015 NC_009441.1 6052158 6053504 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 6052158..6053504 Flavobacterium johnsoniae UW101 5092159 YP_001197334.1 CDS Fjoh_5016 NC_009441.1 6053635 6055872 D PFAM: TrkA-C domain protein; sodium/hydrogen exchanger; sodium/hydrogen exchanger 6053635..6055872 Flavobacterium johnsoniae UW101 5092160 YP_001197335.1 CDS Fjoh_5017 NC_009441.1 6056062 6056700 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; peroxidase complement(6056062..6056700) Flavobacterium johnsoniae UW101 5092161 YP_001197336.1 CDS Fjoh_5018 NC_009441.1 6056812 6057723 R PFAM: Auxin Efflux Carrier; auxin efflux carrier complement(6056812..6057723) Flavobacterium johnsoniae UW101 5092162 YP_001197337.1 CDS Fjoh_5019 NC_009441.1 6057952 6058359 D PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; BadM/Rrf2 family transcriptional regulator 6057952..6058359 Flavobacterium johnsoniae UW101 5092163 YP_001197338.1 CDS Fjoh_5020 NC_009441.1 6058418 6059059 D PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 6058418..6059059 Flavobacterium johnsoniae UW101 5092164 YP_001197339.1 CDS Fjoh_5021 NC_009441.1 6059347 6060438 D TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; LAO/AO transport system ATPase 6059347..6060438 Flavobacterium johnsoniae UW101 5092165 YP_001197340.1 CDS Fjoh_5022 NC_009441.1 6060466 6060999 R hypothetical protein complement(6060466..6060999) Flavobacterium johnsoniae UW101 5092166 YP_001197341.1 CDS Fjoh_5023 NC_009441.1 6061180 6063120 R PFAM: sulfatase; sulfatase complement(6061180..6063120) Flavobacterium johnsoniae UW101 5092167 YP_001197342.1 CDS Fjoh_5024 NC_009441.1 6063163 6063390 R hypothetical protein complement(6063163..6063390) Flavobacterium johnsoniae UW101 5092168 YP_001197343.1 CDS Fjoh_5025 NC_009441.1 6063510 6064895 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(6063510..6064895) Flavobacterium johnsoniae UW101 5092169 YP_001197344.1 CDS Fjoh_5026 NC_009441.1 6065086 6065601 D hypothetical protein 6065086..6065601 Flavobacterium johnsoniae UW101 5092170 YP_001197345.1 CDS Fjoh_5027 NC_009441.1 6065770 6066705 D hypothetical protein 6065770..6066705 Flavobacterium johnsoniae UW101 5092171 YP_001197346.1 CDS Fjoh_5028 NC_009441.1 6066708 6067421 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(6066708..6067421) Flavobacterium johnsoniae UW101 5092172 YP_001197347.1 CDS Fjoh_5029 NC_009441.1 6067706 6068692 R PFAM: histidine kinase internal region; signal transduction histidine kinase LytS complement(6067706..6068692) Flavobacterium johnsoniae UW101 5092173 YP_001197348.1 CDS Fjoh_5030 NC_009441.1 6069047 6069925 R PFAM: protein of unknown function DUF344; hypothetical protein complement(6069047..6069925) Flavobacterium johnsoniae UW101 5092174 YP_001197349.1 CDS Fjoh_5031 NC_009441.1 6070019 6070855 D hypothetical protein 6070019..6070855 Flavobacterium johnsoniae UW101 5092175 YP_001197350.1 CDS Fjoh_5032 NC_009441.1 6070932 6073088 D PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; prolyl oligopeptidase 6070932..6073088 Flavobacterium johnsoniae UW101 5092176 YP_001197351.1 CDS Fjoh_5033 NC_009441.1 6073284 6073784 D PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 6073284..6073784 Flavobacterium johnsoniae UW101 5092177 YP_001197352.1 CDS Fjoh_5034 NC_009441.1 6073787 6074764 D hypothetical protein 6073787..6074764 Flavobacterium johnsoniae UW101 5092178 YP_001197353.1 CDS Fjoh_5035 NC_009441.1 6074844 6076973 D PFAM: von Willebrand factor, type A; von Willebrand factor, type A 6074844..6076973 Flavobacterium johnsoniae UW101 5092179 YP_001197354.1 CDS Fjoh_5036 NC_009441.1 6077028 6077615 D PFAM: Scramblase; scramblase 6077028..6077615 Flavobacterium johnsoniae UW101 5092180 YP_001197355.1 CDS fabG NC_009441.1 6077729 6078445 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 6077729..6078445 Flavobacterium johnsoniae UW101 5092181 YP_001197356.1 CDS Fjoh_5038 NC_009441.1 6078517 6079026 D hypothetical protein 6078517..6079026 Flavobacterium johnsoniae UW101 5092182 YP_001197357.1 CDS Fjoh_5039 NC_009441.1 6079189 6080523 R TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein complement(6079189..6080523) Flavobacterium johnsoniae UW101 5092183 YP_001197358.1 CDS Fjoh_5040 NC_009441.1 6080948 6081532 D hypothetical protein 6080948..6081532 Flavobacterium johnsoniae UW101 5092184 YP_001197359.1 CDS Fjoh_5041 NC_009441.1 6081610 6082137 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(6081610..6082137) Flavobacterium johnsoniae UW101 5092185 YP_001197360.1 CDS Fjoh_5042 NC_009441.1 6082144 6082947 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; cof family hydrolase complement(6082144..6082947) Flavobacterium johnsoniae UW101 5092186 YP_001197361.1 CDS Fjoh_5043 NC_009441.1 6083028 6083246 R hypothetical protein complement(6083028..6083246) Flavobacterium johnsoniae UW101 5092187 YP_001197362.1 CDS Fjoh_5044 NC_009441.1 6083274 6084089 R dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein complement(6083274..6084089) Flavobacterium johnsoniae UW101 5092188 YP_001197363.1 CDS Fjoh_5045 NC_009441.1 6084116 6084733 R hypothetical protein complement(6084116..6084733) Flavobacterium johnsoniae UW101 5092189 YP_001197364.1 CDS Fjoh_5046 NC_009441.1 6084769 6085434 R PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase complement(6084769..6085434) Flavobacterium johnsoniae UW101 5092190 YP_001197365.1 CDS Fjoh_5047 NC_009441.1 6085538 6086701 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(6085538..6086701) Flavobacterium johnsoniae UW101 5092191 YP_001197366.1 CDS Fjoh_5048 NC_009441.1 6086898 6088214 R Na+ efflux ABC transporter permease component-like protein complement(6086898..6088214) Flavobacterium johnsoniae UW101 5092192 YP_001197367.1 CDS Fjoh_5049 NC_009441.1 6088305 6089234 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(6088305..6089234) Flavobacterium johnsoniae UW101 5092193 YP_001197368.1 CDS Fjoh_5050 NC_009441.1 6089396 6090502 R TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; chaperone protein DnaJ complement(6089396..6090502) Flavobacterium johnsoniae UW101 5092194 YP_001197369.1 CDS Fjoh_5051 NC_009441.1 6090571 6091149 R PFAM: GrpE protein; heat shock protein GrpE complement(6090571..6091149) Flavobacterium johnsoniae UW101 5092195 YP_001197370.1 CDS hisS NC_009441.1 6091653 6093080 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(6091653..6093080) Flavobacterium johnsoniae UW101 5094137 YP_001197371.1 CDS Fjoh_5053 NC_009441.1 6093319 6094563 D PFAM: protein of unknown function DUF214; hypothetical protein 6093319..6094563 Flavobacterium johnsoniae UW101 5092197 YP_001197372.1 CDS Fjoh_5054 NC_009441.1 6094651 6095505 R TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 12; HemK family modification methylase complement(6094651..6095505) Flavobacterium johnsoniae UW101 5092198 YP_001197373.1 CDS Fjoh_5055 NC_009441.1 6095541 6096350 R hypothetical protein complement(6095541..6096350) Flavobacterium johnsoniae UW101 5092199 YP_001197374.1 CDS Fjoh_5056 NC_009441.1 6096355 6096840 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(6096355..6096840) Flavobacterium johnsoniae UW101 5092200 Fjoh_R0003 tRNA Fjoh_R0003 NC_009441.1 27468 27544 R tRNA-Ala complement(27468..27544) Flavobacterium johnsoniae UW101 5092202 Fjoh_R0004 tRNA Fjoh_R0004 NC_009441.1 27685 27758 R tRNA-Ile complement(27685..27758) Flavobacterium johnsoniae UW101 5092203 Fjoh_R0006 tRNA Fjoh_R0006 NC_009441.1 59185 59260 D tRNA-Lys 59185..59260 Flavobacterium johnsoniae UW101 5091036 Fjoh_R0007 tRNA Fjoh_R0007 NC_009441.1 59298 59373 D tRNA-Lys 59298..59373 Flavobacterium johnsoniae UW101 5094138 Fjoh_R0008 tRNA Fjoh_R0008 NC_009441.1 59415 59497 D tRNA-Leu 59415..59497 Flavobacterium johnsoniae UW101 5094139 Fjoh_R0009 tRNA Fjoh_R0009 NC_009441.1 60334 60409 D tRNA-Lys 60334..60409 Flavobacterium johnsoniae UW101 5091037 Fjoh_R0010 tRNA Fjoh_R0010 NC_009441.1 149554 149630 D tRNA-Met 149554..149630 Flavobacterium johnsoniae UW101 5094472 Fjoh_R0011 tRNA Fjoh_R0011 NC_009441.1 210753 210830 D tRNA-Pro 210753..210830 Flavobacterium johnsoniae UW101 5094528 Fjoh_R0012 tRNA Fjoh_R0012 NC_009441.1 285239 285315 R tRNA-Thr complement(285239..285315) Flavobacterium johnsoniae UW101 5091319 Fjoh_R0013 tRNA Fjoh_R0013 NC_009441.1 285421 285497 R tRNA-Thr complement(285421..285497) Flavobacterium johnsoniae UW101 5094146 Fjoh_R0014 tRNA Fjoh_R0014 NC_009441.1 479336 479413 D tRNA-Val 479336..479413 Flavobacterium johnsoniae UW101 5089976 Fjoh_R0017 tRNA Fjoh_R0017 NC_009441.1 503808 503884 R tRNA-Ala complement(503808..503884) Flavobacterium johnsoniae UW101 5094151 Fjoh_R0018 tRNA Fjoh_R0018 NC_009441.1 504025 504098 R tRNA-Ile complement(504025..504098) Flavobacterium johnsoniae UW101 5094152 Fjoh_R0020 tRNA Fjoh_R0020 NC_009441.1 636553 636629 D tRNA-Ala 636553..636629 Flavobacterium johnsoniae UW101 5090905 Fjoh_R0021 tRNA Fjoh_R0021 NC_009441.1 717349 717422 R tRNA-Met complement(717349..717422) Flavobacterium johnsoniae UW101 5091404 Fjoh_R0022 tRNA Fjoh_R0022 NC_009441.1 1158187 1158260 D tRNA-OTHER 1158187..1158260 Flavobacterium johnsoniae UW101 5090606 Fjoh_R0023 tRNA Fjoh_R0023 NC_009441.1 1273954 1274033 R tRNA-Leu complement(1273954..1274033) Flavobacterium johnsoniae UW101 5090204 Fjoh_R0024 tRNA Fjoh_R0024 NC_009441.1 1309065 1309138 R tRNA-Asn complement(1309065..1309138) Flavobacterium johnsoniae UW101 5089705 Fjoh_R0025 tRNA Fjoh_R0025 NC_009441.1 1309174 1309250 R tRNA-Asn complement(1309174..1309250) Flavobacterium johnsoniae UW101 5094161 Fjoh_R0026 tRNA Fjoh_R0026 NC_009441.1 1466584 1466673 D tRNA-Ser 1466584..1466673 Flavobacterium johnsoniae UW101 5093987 Fjoh_R0027 tRNA Fjoh_R0027 NC_009441.1 1544677 1544753 D tRNA-Asp 1544677..1544753 Flavobacterium johnsoniae UW101 5092355 Fjoh_R0028 tRNA Fjoh_R0028 NC_009441.1 1545349 1545425 D tRNA-Asp 1545349..1545425 Flavobacterium johnsoniae UW101 5094165 Fjoh_R0029 tRNA Fjoh_R0029 NC_009441.1 1555298 1555382 R tRNA-Leu complement(1555298..1555382) Flavobacterium johnsoniae UW101 5092365 Fjoh_R0030 tRNA Fjoh_R0030 NC_009441.1 1617260 1617335 R tRNA-Phe complement(1617260..1617335) Flavobacterium johnsoniae UW101 5093194 Fjoh_R0031 tRNA Fjoh_R0031 NC_009441.1 1877676 1877746 D tRNA-Gln 1877676..1877746 Flavobacterium johnsoniae UW101 5090978 Fjoh_R0032 tRNA Fjoh_R0032 NC_009441.1 1877856 1877926 D tRNA-Gln 1877856..1877926 Flavobacterium johnsoniae UW101 5093540 Fjoh_R0033 tRNA Fjoh_R0033 NC_009441.1 1997996 1998071 D tRNA-Gly 1997996..1998071 Flavobacterium johnsoniae UW101 5093066 Fjoh_R0034 tRNA Fjoh_R0034 NC_009441.1 1998083 1998171 D tRNA-Leu 1998083..1998171 Flavobacterium johnsoniae UW101 5093542 Fjoh_R0035 tRNA Fjoh_R0035 NC_009441.1 2049396 2049471 D tRNA-Gly 2049396..2049471 Flavobacterium johnsoniae UW101 5091835 Fjoh_R0036 tRNA Fjoh_R0036 NC_009441.1 2049565 2049637 D tRNA-Gly 2049565..2049637 Flavobacterium johnsoniae UW101 5093544 Fjoh_R0037 tRNA Fjoh_R0037 NC_009441.1 2099953 2100026 D tRNA-Arg 2099953..2100026 Flavobacterium johnsoniae UW101 5091441 Fjoh_R0038 tRNA Fjoh_R0038 NC_009441.1 2152539 2152614 R tRNA-Met complement(2152539..2152614) Flavobacterium johnsoniae UW101 5090396 Fjoh_R0039 tRNA Fjoh_R0039 NC_009441.1 2161302 2161376 R tRNA-Glu complement(2161302..2161376) Flavobacterium johnsoniae UW101 5090403 Fjoh_R0040 tRNA Fjoh_R0040 NC_009441.1 2163372 2163447 R tRNA-Met complement(2163372..2163447) Flavobacterium johnsoniae UW101 5090405 Fjoh_R0041 tRNA Fjoh_R0041 NC_009441.1 2238456 2238532 D tRNA-Thr 2238456..2238532 Flavobacterium johnsoniae UW101 5091672 Fjoh_R0042 tRNA Fjoh_R0042 NC_009441.1 2238589 2238672 D tRNA-Tyr 2238589..2238672 Flavobacterium johnsoniae UW101 5093550 Fjoh_R0043 tRNA Fjoh_R0043 NC_009441.1 2238761 2238835 D tRNA-Thr 2238761..2238835 Flavobacterium johnsoniae UW101 5093551 Fjoh_R0044 tRNA Fjoh_R0044 NC_009441.1 2240138 2240211 D tRNA-Trp 2240138..2240211 Flavobacterium johnsoniae UW101 5091673 Fjoh_R0046 tRNA Fjoh_R0046 NC_009441.1 2305862 2305935 D tRNA-Ile 2305862..2305935 Flavobacterium johnsoniae UW101 5093554 Fjoh_R0047 tRNA Fjoh_R0047 NC_009441.1 2306076 2306152 D tRNA-Ala 2306076..2306152 Flavobacterium johnsoniae UW101 5093555 Fjoh_R0050 tRNA Fjoh_R0050 NC_009441.1 2543534 2543621 R tRNA-Ser complement(2543534..2543621) Flavobacterium johnsoniae UW101 5093869 Fjoh_R0052 tRNA Fjoh_R0052 NC_009441.1 2546531 2546604 D tRNA-Ile 2546531..2546604 Flavobacterium johnsoniae UW101 5093562 Fjoh_R0053 tRNA Fjoh_R0053 NC_009441.1 2546745 2546821 D tRNA-Ala 2546745..2546821 Flavobacterium johnsoniae UW101 5093563 Fjoh_R0056 tRNA Fjoh_R0056 NC_009441.1 2551831 2551918 R tRNA-Ser complement(2551831..2551918) Flavobacterium johnsoniae UW101 5093568 Fjoh_R0058 tRNA Fjoh_R0058 NC_009441.1 3265464 3265537 D tRNA-Ile 3265464..3265537 Flavobacterium johnsoniae UW101 5092489 Fjoh_R0059 tRNA Fjoh_R0059 NC_009441.1 3265678 3265754 D tRNA-Ala 3265678..3265754 Flavobacterium johnsoniae UW101 5092490 Fjoh_R0062 tRNA Fjoh_R0062 NC_009441.1 3269156 3269228 D tRNA-Phe 3269156..3269228 Flavobacterium johnsoniae UW101 5092493 Fjoh_R0063 tRNA Fjoh_R0063 NC_009441.1 3269235 3269323 D tRNA-Leu 3269235..3269323 Flavobacterium johnsoniae UW101 5092494 Fjoh_R0064 tRNA Fjoh_R0064 NC_009441.1 3353648 3353725 D tRNA-Val 3353648..3353725 Flavobacterium johnsoniae UW101 5093261 Fjoh_R0065 tRNA Fjoh_R0065 NC_009441.1 3354107 3354184 D tRNA-Val 3354107..3354184 Flavobacterium johnsoniae UW101 5092496 Fjoh_R0066 tRNA Fjoh_R0066 NC_009441.1 3525190 3525266 D tRNA-Arg 3525190..3525266 Flavobacterium johnsoniae UW101 5091591 Fjoh_R0069 tRNA Fjoh_R0069 NC_009441.1 5121886 5121962 R tRNA-Ala complement(5121886..5121962) Flavobacterium johnsoniae UW101 5092510 Fjoh_R0070 tRNA Fjoh_R0070 NC_009441.1 5122103 5122176 R tRNA-Ile complement(5122103..5122176) Flavobacterium johnsoniae UW101 5092511 Fjoh_R0072 tRNA Fjoh_R0072 NC_009441.1 5248419 5248499 D tRNA-Tyr 5248419..5248499 Flavobacterium johnsoniae UW101 5092514 Fjoh_R0075 tRNA Fjoh_R0075 NC_009441.1 5575980 5576056 R tRNA-Arg complement(5575980..5576056) Flavobacterium johnsoniae UW101 5092923 Fjoh_R0076 tRNA Fjoh_R0076 NC_009441.1 5576071 5576145 R tRNA-Pro complement(5576071..5576145) Flavobacterium johnsoniae UW101 5094129 Fjoh_R0077 tRNA Fjoh_R0077 NC_009441.1 5576160 5576243 R tRNA-Ser complement(5576160..5576243) Flavobacterium johnsoniae UW101 5094130 Fjoh_R0078 tRNA Fjoh_R0078 NC_009441.1 5696434 5696509 R tRNA-His complement(5696434..5696509) Flavobacterium johnsoniae UW101 5092415 Fjoh_R0079 tRNA Fjoh_R0079 NC_009441.1 5739228 5739348 R tRNA-OTHER complement(5739228..5739348) Flavobacterium johnsoniae UW101 5090075 Fjoh_R0081 tRNA Fjoh_R0081 NC_009441.1 5965190 5965261 R tRNA-Glu complement(5965190..5965261) Flavobacterium johnsoniae UW101 5094209 Fjoh_R0082 tRNA Fjoh_R0082 NC_009441.1 5965304 5965378 R tRNA-Glu complement(5965304..5965378) Flavobacterium johnsoniae UW101 5094135 Fjoh_R0083 tRNA Fjoh_R0083 NC_009441.1 6091459 6091532 R tRNA-Trp complement(6091459..6091532) Flavobacterium johnsoniae UW101 5092196 Fjoh_R0001 rRNA Fjoh_R0001 NC_009441.1 24130 24249 R 5S ribosomal RNA complement(24130..24249) Flavobacterium johnsoniae UW101 5091006 Fjoh_R0002 rRNA Fjoh_R0002 NC_009441.1 24406 27279 R 23S ribosomal RNA complement(24406..27279) Flavobacterium johnsoniae UW101 5092201 Fjoh_R0005 rRNA Fjoh_R0005 NC_009441.1 27883 29401 R 16S ribosomal RNA complement(27883..29401) Flavobacterium johnsoniae UW101 5092204 Fjoh_R0015 rRNA Fjoh_R0015 NC_009441.1 500470 500589 R 5S ribosomal RNA complement(500470..500589) Flavobacterium johnsoniae UW101 5094149 Fjoh_R0016 rRNA Fjoh_R0016 NC_009441.1 500746 503619 R 23S ribosomal RNA complement(500746..503619) Flavobacterium johnsoniae UW101 5094150 Fjoh_R0019 rRNA Fjoh_R0019 NC_009441.1 504223 505741 R 16S ribosomal RNA complement(504223..505741) Flavobacterium johnsoniae UW101 5094153 Fjoh_R0045 rRNA Fjoh_R0045 NC_009441.1 2304220 2305738 D 16S ribosomal RNA 2304220..2305738 Flavobacterium johnsoniae UW101 5094346 Fjoh_R0048 rRNA Fjoh_R0048 NC_009441.1 2306342 2309215 D 23S ribosomal RNA 2306342..2309215 Flavobacterium johnsoniae UW101 5093556 Fjoh_R0049 rRNA Fjoh_R0049 NC_009441.1 2309372 2309491 D 5S ribosomal RNA 2309372..2309491 Flavobacterium johnsoniae UW101 5093557 Fjoh_R0051 rRNA Fjoh_R0051 NC_009441.1 2544889 2546407 D 16S ribosomal RNA 2544889..2546407 Flavobacterium johnsoniae UW101 5093561 Fjoh_R0054 rRNA Fjoh_R0054 NC_009441.1 2547011 2549884 D 23S ribosomal RNA 2547011..2549884 Flavobacterium johnsoniae UW101 5093564 Fjoh_R0055 rRNA Fjoh_R0055 NC_009441.1 2550041 2550160 D 5S ribosomal RNA 2550041..2550160 Flavobacterium johnsoniae UW101 5093565 Fjoh_R0057 rRNA Fjoh_R0057 NC_009441.1 3263822 3265340 D 16S ribosomal RNA 3263822..3265340 Flavobacterium johnsoniae UW101 5090534 Fjoh_R0060 rRNA Fjoh_R0060 NC_009441.1 3265944 3268817 D 23S ribosomal RNA 3265944..3268817 Flavobacterium johnsoniae UW101 5092491 Fjoh_R0061 rRNA Fjoh_R0061 NC_009441.1 3268974 3269093 D 5S ribosomal RNA 3268974..3269093 Flavobacterium johnsoniae UW101 5092492 Fjoh_R0067 rRNA Fjoh_R0067 NC_009441.1 5118548 5118667 R 5S ribosomal RNA complement(5118548..5118667) Flavobacterium johnsoniae UW101 5092288 Fjoh_R0068 rRNA Fjoh_R0068 NC_009441.1 5118824 5121697 R 23S ribosomal RNA complement(5118824..5121697) Flavobacterium johnsoniae UW101 5092509 Fjoh_R0071 rRNA Fjoh_R0071 NC_009441.1 5122301 5123819 R 16S ribosomal RNA complement(5122301..5123819) Flavobacterium johnsoniae UW101 5092512