-- dump date 20120504_144923 -- class Genbank::CDS -- table cds_note -- id note YP_004581515.1 KEGG: fre:Franean1_7337 single-stranded nucleic acid binding R3H domain-containing protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H YP_004581516.1 KEGG: fre:Franean1_7338 60 kDa inner membrane insertion protein; TIGRFAM: Membrane insertion protein, OxaA/YidC, core; PFAM: Membrane insertion protein, OxaA/YidC YP_004581517.1 TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: fra:Francci3_4546 hypothetical protein; PFAM: Protein of unknown function DUF37 YP_004581518.1 TIGRFAM: Ribonuclease P; HAMAP: Ribonuclease P; KEGG: fre:Franean1_7340 ribonuclease P protein component; PFAM: Ribonuclease P YP_004581519.1 TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: fra:Francci3_4548 50S ribosomal protein L34; PFAM: Ribosomal protein L34 YP_004581520.1 SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: fre:Franean1_0001 chromosomal replication initiator protein DnaA; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal YP_004581521.1 SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: fal:FRAAL0004 DNA polymerase III, beta chain; PFAM: DNA polymerase III, beta chain YP_004581522.1 TIGRFAM: DNA-binding, RecF; HAMAP: DNA replication and repair protein recF; KEGG: fre:Franean1_0004 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC protein, N-terminal YP_004581523.1 KEGG: fre:Franean1_0005 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF721 YP_004581524.1 SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA gyrase, subunit B; KEGG: fra:Francci3_0006 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal YP_004581525.1 SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: fra:Francci3_0007 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YP_004581526.1 KEGG: fal:FRAAL0011 hypothetical protein YP_004581527.1 PFAM: Transposase IS3/IS911; KEGG: sro:Sros_9415 transposase IS3/IS911 family protein YP_004581528.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bpd:BURPS668_A1464 Rieske family iron-sulfur cluster-binding protein YP_004581529.1 PFAM: PEP-utilising enzyme, mobile region; KEGG: mav:MAV_5056 PEP-utilizing protein YP_004581531.1 KEGG: gob:Gobs_0470 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase YP_004581532.1 KEGG: mav:MAV_1959 hypothetical protein YP_004581533.1 KEGG: rer:RER_08030 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region YP_004581534.1 KEGG: sma:SAV_7043 cation efflux system protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein YP_004581535.1 KEGG: nve:NEMVE_v1g209555 hypothetical protein YP_004581536.1 PFAM: NUDIX hydrolase domain; KEGG: scb:SCAB_17721 hypothetical protein YP_004581537.1 KEGG: fri:FraEuI1c_4436 TIR protein YP_004581538.1 KEGG: fri:FraEuI1c_1477 hypothetical protein YP_004581539.1 PFAM: Transposase, IS204/IS1001/IS1096/IS1165; KEGG: transposase IS204/IS1001/IS1096/IS1165 family protein YP_004581540.1 KEGG: rbi:RB2501_04040 hypothetical protein YP_004581541.1 KEGG: fra:Francci3_0937 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: Pyridine nucleotide-disulphide oxidoreductase, dimerisation; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004581542.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_1793 TetR family transcriptional regulator YP_004581543.1 KEGG: fri:FraEuI1c_1777 hypothetical protein YP_004581544.1 PFAM: SNARE associated Golgi protein; KEGG: fre:Franean1_0017 SNARE associated Golgi protein YP_004581545.1 KEGG: fre:Franean1_0019 PEBP family protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP YP_004581546.1 KEGG: fre:Franean1_0020 hypothetical protein YP_004581547.1 KEGG: sro:Sros_3464 fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal YP_004581548.1 PFAM: ABC transporter-like; KEGG: scb:SCAB_85501 siderophore transport system ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004581549.1 PFAM: Bacterial transport system permease protein; KEGG: sro:Sros_3466 ABC Fe+3-siderophore transporter, inner membrane subunit YP_004581550.1 PFAM: Bacterial transport system permease protein; KEGG: sro:Sros_3467 transport system permease protein YP_004581551.1 PFAM: Periplasmic binding protein; KEGG: ami:Amir_5065 periplasmic binding protein YP_004581552.1 PFAM: MbtH-like protein; KEGG: sro:Sros_3469 hypothetical protein YP_004581554.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: sro:Sros_3472 lipid ABC transporter ATPase/inner membrane protein YP_004581555.1 KEGG: fre:Franean1_5949 L-lysine 6-monooxygenase (NADPH); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004581556.1 PFAM: Integrase, catalytic core, phage; KEGG: kfl:Kfla_3349 integrase family protein YP_004581557.1 TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: kfl:Kfla_3348 DNA binding domain protein, excisionase family YP_004581558.1 KEGG: fra:Francci3_4273 putative plasmid replication initiator protein YP_004581560.1 manually curated; PFAM: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated; KEGG: mil:ML5_5677 transcriptional regulator, GntR family; SMART: HTH transcriptional regulator, GntR YP_004581561.1 KEGG: fal:FRAAL6306 hypothetical protein YP_004581562.1 PFAM: Polysaccharide deacetylase; Glycosyl transferase, family 2; KEGG: sro:Sros_7875 polysaccharide deacetylase YP_004581563.1 KEGG: fra:Francci3_2003 hypothetical protein YP_004581564.1 PFAM: Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; KEGG: fre:Franean1_6975 ferredoxin YP_004581565.1 PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: fri:FraEuI1c_0015 phenazine biosynthesis PhzC/PhzF protein YP_004581566.1 PFAM: Pentapeptide repeat; KEGG: cai:Caci_5595 pentapeptide repeat protein YP_004581567.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004581568.1 SMART: Helix-turn-helix type 3; KEGG: fra:Francci3_3446 XRE family transcriptional regulator YP_004581569.1 PFAM: Protein of unknown function DUF574; KEGG: sma:SAV_1052 hypothetical protein YP_004581570.1 PFAM: ABC transporter-like; KEGG: fre:Franean1_4057 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004581571.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL0143 hypothetical protein YP_004581572.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004581573.1 KEGG: fal:FRAAL3336 hypothetical protein YP_004581574.1 KEGG: kfl:Kfla_3687 ATPase YP_004581575.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004581576.1 KEGG: fal:FRAAL6626 putative ribokinase; PFAM: Carbohydrate/purine kinase YP_004581577.1 HAMAP: Formylmethionine deformylase; PFAM: Formylmethionine deformylase; Helix-turn-helix type 3; KEGG: fra:Francci3_4244 formylmethionine deformylase; SMART: Helix-turn-helix type 3 YP_004581578.1 KEGG: fre:Franean1_5528 hypothetical protein YP_004581579.1 KEGG: fal:FRAAL5447 putative transcriptional regulator YP_004581580.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004581581.1 KEGG: fre:Franean1_5525 hypothetical protein YP_004581582.1 KEGG: fre:Franean1_5524 hypothetical protein YP_004581583.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fre:Franean1_6301 major facilitator transporter YP_004581584.1 KEGG: fal:FRAAL1155 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004581585.1 KEGG: fra:Francci3_0409 peptidoglycan-binding LysM YP_004581587.1 KEGG: kra:Krad_3124 protein of unknown function DUF909 YP_004581588.1 KEGG: cai:Caci_8697 hypothetical protein YP_004581589.1 KEGG: sco:SCO4539 hypothetical protein YP_004581590.1 PFAM: Amino acid permease-associated region; KEGG: mbt:JTY_2011 putative integral membrane protein YP_004581591.1 KEGG: fri:FraEuI1c_6440 cell division protein FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; SMART: ATPase, AAA+ type, core YP_004581592.1 KEGG: fra:Francci3_1594 hypothetical protein YP_004581593.1 KEGG: fre:Franean1_6202 PII uridylyl-transferase; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Metal-dependent phosphohydrolase, HD region, subdomain; Amino acid-binding ACT; TIGRFAM: Protein-PII uridylyltransferase; HAMAP: Protein-PII uridylyltransferase; SMART: Metal-dependent phosphohydrolase, HD region YP_004581594.1 PFAM: Nitrogen regulatory protein PII; KEGG: fre:Franean1_6203 nitrogen regulatory protein P-II YP_004581595.1 KEGG: fra:Francci3_0422 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter YP_004581596.1 PFAM: NLP/P60; KEGG: fre:Franean1_6205 NLP/P60 protein YP_004581597.1 KEGG: fre:Franean1_6206 DtxR family iron dependent repressor; PFAM: Iron dependent repressor; SMART: Iron dependent repressor YP_004581598.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004581599.1 PFAM: Isochorismatase-like; KEGG: saq:Sare_1936 isochorismatase hydrolase YP_004581600.1 KEGG: saq:Sare_1935 hypothetical protein YP_004581601.1 KEGG: ami:Amir_6358 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004581605.1 PFAM: Integrase, catalytic core; KEGG: zpr:ZPR_3548 transposase-like protein YP_004581606.1 PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: ara:Arad_9023 reverse transcriptase/maturase protein YP_004581607.1 KEGG: fre:Franean1_4607 RNA-directed DNA polymerase; manually curated; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Intron maturase, type II YP_004581608.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004581610.1 KEGG: sgr:SGR_3591 hypothetical protein YP_004581611.1 KEGG: fre:Franean1_6268 hypothetical protein YP_004581612.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: kfl:Kfla_0388 cell divisionFtsK/SpoIIIE YP_004581613.1 manually curated; KEGG: fre:Franean1_4461 putative transposase YP_004581620.1 PFAM: NUDIX hydrolase domain; KEGG: amd:AMED_6169 DNA hydrolase YP_004581624.1 KEGG: mpa:MAP0068 single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004581626.1 PFAM: DNA primase/polymerase, bifunctional, N-terminal; KEGG: fra:Francci3_1201 hypothetical protein YP_004581627.1 PFAM: Transposase, mutator type; KEGG: scb:SCAB_0381 transposase YP_004581628.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004581629.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; KEGG: mgi:Mflv_4588 alcohol dehydrogenase YP_004581630.1 KEGG: mva:Mvan_0012 cytochrome P450; PFAM: Cytochrome P450 YP_004581631.1 KEGG: amd:AMED_7193 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004581632.1 KEGG: mul:MUL_2876 putative regulatory protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal YP_004581634.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004581635.1 PFAM: Protein of unknown function DUF2137; KEGG: fra:Francci3_0389 hypothetical protein YP_004581636.1 KEGG: fre:Franean1_5820 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004581637.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004581638.1 SMART: Toll-Interleukin receptor; KEGG: amr:AM1_G0010 hypothetical protein YP_004581639.1 KEGG: nfa:nfa24120 hypothetical protein YP_004581640.1 TIGRFAM: Protein of unknown function DUF111; HAMAP: UPF0272 protein; KEGG: fri:FraEuI1c_0110 protein of unknown function DUF111; PFAM: Protein of unknown function DUF111 YP_004581641.1 KEGG: fra:Francci3_4411 chromosome partitioning ATPase-like protein YP_004581642.1 KEGG: fre:Franean1_0162 geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD dependent oxidoreductase YP_004581643.1 PFAM: SEC-C motif; KEGG: fri:FraEuI1c_0107 sec-C motif domain protein YP_004581644.1 PFAM: CobB/CobQ-like glutamine amidotransferase; TIGRFAM: Phosphoribosylformylglycinamidine synthase I; HAMAP: Phosphoribosylformylglycinamidine synthase 1; KEGG: fal:FRAAL6724 phosphoribosylformylglycinamidine synthase I YP_004581645.1 TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted; KEGG: fre:Franean1_5428 hypothetical protein YP_004581647.1 PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase II; HAMAP: Phosphoribosylformylglycinamidine synthase 2; KEGG: fal:FRAAL6730 phosphoribosylformylglycinamidine synthase II YP_004581649.1 KEGG: fal:FRAAL6731 hypothetical protein YP_004581650.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fra:Francci3_4419 hypothetical protein YP_004581651.1 KEGG: fal:FRAAL6733 hypothetical protein YP_004581652.1 KEGG: fre:Franean1_0152 hypothetical protein; TIGRFAM: Futalosine nucleosidase; PFAM: Nucleoside phosphorylase YP_004581653.1 KEGG: fra:Francci3_4422 hypothetical protein YP_004581654.1 KEGG: fra:Francci3_4426 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004581655.1 KEGG: fra:Francci3_4427 hypothetical protein YP_004581656.1 KEGG: fre:Franean1_0147 ExsB family protein; TIGRFAM: Conserved hypothetical protein CHP00268; PFAM: Queuosine synthesis-like YP_004581657.1 KEGG: fre:Franean1_0148 phosphoribosylformylglycinamidine synthase, PurS; TIGRFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; PFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit YP_004581658.1 KEGG: fal:FRAAL6737 metallo-beta-lactamase; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_004581659.1 PFAM: Domain of unknown function DUF1994; KEGG: fre:Franean1_0142 hypothetical protein YP_004581660.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; PAS fold-3; KEGG: fal:FRAAL1954 putative sensory box/GGDEF family protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF YP_004581661.1 TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: tcu:Tcur_3956 arginyl-tRNA synthetase YP_004581662.1 PFAM: Fatty acid desaturase, type 1; KEGG: fre:Franean1_6974 fatty acid desaturase YP_004581663.1 KEGG: fre:Franean1_1523 hypothetical protein YP_004581664.1 KEGG: fal:FRAAL5351 putative Na+/H+ antiporter; putative membrane protein; TIGRFAM: Na+/H+ exchanger, yjcE-like, bacteria; PFAM: Cation/H+ exchanger YP_004581665.1 KEGG: kra:Krad_0436 stage II sporulation E family protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related YP_004581666.1 KEGG: fre:Franean1_0140 FHA domain-containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated YP_004581667.1 KEGG: fal:FRAAL6750 hypothetical protein; PFAM: Forkhead-associated; SMART: Forkhead-associated YP_004581668.1 KEGG: fre:Franean1_0138 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related YP_004581669.1 PFAM: Cell cycle protein; KEGG: fre:Franean1_0137 cell cycle protein YP_004581670.1 PFAM: Penicillin-binding protein, transpeptidase; KEGG: fre:Franean1_0136 peptidoglycan glycosyltransferase YP_004581671.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: fre:Franean1_0135 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004581672.1 PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: fal:FRAAL6755 putative serine/threonine-protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA YP_004581673.1 TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: fre:Franean1_0133 para-aminobenzoate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal YP_004581674.1 KEGG: cai:Caci_3115 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004581675.1 PFAM: Uncharacterised protein family UPF0233; KEGG: fre:Franean1_0131 hypothetical protein YP_004581676.1 KEGG: fal:FRAAL6763 hypothetical protein YP_004581677.1 PFAM: Peptidase S54, rhomboid; KEGG: fre:Franean1_0125 rhomboid family protein YP_004581678.1 KEGG: fra:Francci3_4444 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type YP_004581679.1 KEGG: fra:Francci3_4445 hypothetical protein YP_004581680.1 PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: fra:Francci3_4446 glucose-methanol-choline oxidoreductase YP_004581681.1 KEGG: fra:Francci3_4447 hypothetical protein YP_004581682.1 KEGG: mjl:Mjls_3857 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YP_004581683.1 PFAM: Aminoglycoside phosphotransferase; KEGG: fra:Francci3_3424 aminoglycoside phosphotransferase YP_004581684.1 KEGG: fre:Franean1_0671 putative alkylated DNA repair protein YP_004581685.1 KEGG: sma:SAV_4093 hypothetical protein YP_004581686.1 KEGG: sco:SCO4697 integral membrane protein YP_004581687.1 KEGG: aba:Acid345_4699 hypothetical protein YP_004581688.1 PFAM: Protein of unknown function DUF839, bacterial; KEGG: fre:Franean1_4197 hypothetical protein YP_004581689.1 KEGG: ptr:464454 plectin YP_004581690.1 PFAM: Protein of unknown function DUF397; KEGG: fal:FRAAL5617 putative AbaA-like regulator protein YP_004581691.1 SMART: Helix-turn-helix type 3; KEGG: fre:Franean1_1293 helix-turn-helix domain-containing protein YP_004581692.1 PFAM: NUDIX hydrolase domain; KEGG: nfa:nfa4540 putative MutT family protein YP_004581693.1 KEGG: cai:Caci_6473 hypothetical protein YP_004581694.1 KEGG: dwi:Dwil_GK23126 GK23126 gene product from transcript GK23126-RA YP_004581695.1 non-canonical start codon; manually curated; KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911 YP_004581696.1 PFAM: Periplasmic binding protein; KEGG: fal:FRAAL3980 putative membrane component of an ABC-transporter YP_004581697.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: swi:Swit_3261 taurine dioxygenase YP_004581698.1 PFAM: Uncharacterised protein family UPF0157; KEGG: fri:FraEuI1c_3737 protein of unknown function UPF0157 YP_004581699.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: fal:FRAAL3029 hypothetical protein YP_004581700.1 KEGG: fal:FRAAL3030 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004581701.1 PFAM: Monooxygenase, FAD-binding; KEGG: gob:Gobs_2343 FAD-binding monooxygenase protein YP_004581702.1 TIGRFAM: parallel beta-helix repeat; PFAM: ATPase, AAA-type, core; KEGG: stp:Strop_0467 ATPase central domain-containing protein; SMART: ATPase, AAA+ type, core; Parallel beta-helix repeat YP_004581705.1 KEGG: fre:Franean1_1182 translation initiation factor IF-2 YP_004581706.1 KEGG: pif:PITG_09760 mucin-like protein YP_004581708.1 KEGG: cur:cur_0374 hypothetical protein YP_004581709.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004581710.1 KEGG: stp:Strop_0481 hypothetical protein YP_004581712.1 PFAM: Aminoglycoside phosphotransferase; KEGG: sma:SAV_4094 hypothetical protein YP_004581715.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004581716.1 KEGG: fre:Franean1_1420 transposase YP_004581717.1 PFAM: Glycosyl transferase, family 9; KEGG: fal:FRAAL3937 putative ADP-heptose:LPS heptosyltransferase YP_004581718.1 KEGG: bacterial translation initiation factor 2 (bIF-2) YP_004581720.1 KEGG: fra:Francci3_1538 hypothetical protein YP_004581721.1 PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: fri:FraEuI1c_0111 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004581722.1 KEGG: tcu:Tcur_0121 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT YP_004581723.1 KEGG: fre:Franean1_0166 hypothetical protein YP_004581724.1 PFAM: Aminoglycoside phosphotransferase; KEGG: fre:Franean1_0165 aminoglycoside phosphotransferase YP_004581726.1 KEGG: fre:Franean1_2444 PE-PGRS family protein YP_004581727.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004581728.1 KEGG: fre:Franean1_2013 hypothetical protein YP_004581729.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fre:Franean1_0167 GCN5-related N-acetyltransferase YP_004581730.1 TIGRFAM: Dihydropteroate synthase; KEGG: fra:Francci3_4407 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS YP_004581731.1 TIGRFAM: Dihydroneopterin aldolase subgroup; Dihydroneopterin aldolase; KEGG: fal:FRAAL6709 dihydroneopterin aldolase (DhnA); PFAM: Dihydroneopterin aldolase YP_004581732.1 TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: fra:Francci3_4405 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YP_004581733.1 KEGG: fra:Francci3_4404 hypothetical protein YP_004581734.1 KEGG: ami:Amir_6814 cell envelope-related transcriptional attenuator YP_004581735.1 KEGG: fre:Franean1_7237 hypothetical protein YP_004581736.1 KEGG: fre:Franean1_7236 putative LpqP (hydrolase/esterase) YP_004581737.1 KEGG: fra:Francci3_0073 hypothetical protein YP_004581738.1 PFAM: Conserved TM helix; KEGG: fra:Francci3_0074 hypothetical protein YP_004581739.1 KEGG: fre:Franean1_0226 hypothetical protein YP_004581740.1 KEGG: fra:Francci3_0075 phage SPO1 DNA polymerase-related protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like YP_004581741.1 PFAM: YkuD domain; KEGG: fre:Franean1_7232 ErfK/YbiS/YcfS/YnhG family protein YP_004581742.1 KEGG: fre:Franean1_7231 hypothetical protein YP_004581743.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; KEGG: fra:Francci3_0079 pyridoxamine 5'-phosphate oxidase YP_004581744.1 KEGG: fre:Franean1_7229 citrate synthase 2; PFAM: Citrate synthase-like YP_004581745.1 PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Phosphoserine aminotransferase, Mycobacterial type; HAMAP: Phosphoserine aminotransferase; KEGG: fal:FRAAL0110 phosphoserine aminotransferase YP_004581746.1 TIGRFAM: Citrate synthase, type II; KEGG: fre:Franean1_7227 citrate synthase I; PFAM: Citrate synthase-like YP_004581747.1 PFAM: Aldo/keto reductase; KEGG: rrs:RoseRS_4538 aldo/keto reductase YP_004581748.1 KEGG: fre:Franean1_7219 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX YP_004581749.1 PFAM: Oxidoreductase, N-terminal; KEGG: fre:Franean1_7221 oxidoreductase domain-containing protein YP_004581750.1 KEGG: fri:FraEuI1c_7092 regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004581751.1 PFAM: Signal transduction response regulator, C-terminal; KEGG: fra:Francci3_0089 response regulator receiver protein YP_004581753.1 KEGG: cai:Caci_2771 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup YP_004581754.1 PFAM: Cupin 2, conserved barrel; KEGG: fre:Franean1_7217 hypothetical protein YP_004581755.1 PFAM: ABC transporter-like; KEGG: pde:Pden_5004 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004581756.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_6336 putative ABC transporter permease protein YP_004581757.1 KEGG: tcu:Tcur_1384 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: Extracellular solute-binding protein, family 3 YP_004581758.1 PFAM: NADPH-dependent FMN reductase; KEGG: fre:Franean1_7216 NADPH-dependent FMN reductase YP_004581759.1 PFAM: Flavin reductase-like, FMN-binding; KEGG: fre:Franean1_7215 flavin reductase domain-containing protein YP_004581760.1 PFAM: Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; KEGG: tcu:Tcur_1390 acyl-CoA dehydrogenase type 2 domain-containing protein YP_004581761.1 KEGG: fre:Franean1_7213 hypothetical protein YP_004581762.1 KEGG: kse:Ksed_22590 hypothetical protein YP_004581763.1 KEGG: fri:FraEuI1c_7086 HSP90 family heat shock protein YP_004581764.1 KEGG: fri:FraEuI1c_7085 hypothetical protein YP_004581766.1 TIGRFAM: Amidophosphoribosyl transferase; KEGG: fal:FRAAL0128 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase YP_004581767.1 PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; manually curated; KEGG: fre:Franean1_7209 phosphoribosylaminoimidazole synthetase; TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase YP_004581768.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: stp:Strop_0927 diguanylate cyclase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF YP_004581769.1 KEGG: fal:FRAAL0131 hypothetical protein YP_004581770.1 KEGG: fre:Franean1_7207 Glu/Leu/Phe/Val dehydrogenase dimerisation region; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YP_004581771.1 KEGG: fre:Franean1_7206 hypothetical protein YP_004581772.1 KEGG: fre:Franean1_7205 DNA binding domain-containing protein; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: HTH transcriptional regulator, MerR YP_004581773.1 KEGG: fri:FraEuI1c_1946 hypothetical protein YP_004581774.1 KEGG: fra:Francci3_3562 translation initiation factor IF-2 YP_004581775.1 PFAM: Malate:quinone-oxidoreductase; TIGRFAM: Malate:quinone-oxidoreductase; KEGG: cmi:CMM_0904 malate:quinone oxidoreductase; HAMAP: Malate:quinone-oxidoreductase YP_004581776.1 manually curated; KEGG: fre:Franean1_4461 putative transposase YP_004581777.1 KEGG: fri:FraEuI1c_0464 putative F420-dependent enzyme; TIGRFAM: F420-dependent enzyme, PPOX class, family Rv2061, putative; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004581778.1 PFAM: Protein of unknown function DUF1211; KEGG: fri:FraEuI1c_1595 protein of unknown function DUF1211 YP_004581779.1 TIGRFAM: Prevent-host-death protein; KEGG: nda:Ndas_3421 prevent-host-death family protein YP_004581780.1 PFAM: PilT protein, N-terminal; KEGG: nda:Ndas_3420 PilT protein domain protein YP_004581781.1 KEGG: fal:FRAAL0211 hypothetical protein YP_004581782.1 KEGG: fra:Francci3_0974 hypothetical protein YP_004581783.1 KEGG: tfu:Tfu_1653 chloride peroxidase; PFAM: Alpha/beta hydrolase fold-1 YP_004581784.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rop:ROP_46070 putative TetR family transcriptional regulator YP_004581785.1 KEGG: fal:FRAAL4744 hypothetical protein; PFAM: RNA-binding S4; SMART: RNA-binding S4 YP_004581786.1 KEGG: fra:Francci3_0984 hypothetical protein YP_004581787.1 PFAM: Oxidoreductase, molybdopterin binding; KEGG: fra:Francci3_0983 oxidoreductase, molybdopterin binding YP_004581788.1 KEGG: fal:FRAAL1632 hypothetical protein YP_004581789.1 KEGG: fri:FraEuI1c_4149 methyltransferase type 11 YP_004581790.1 PFAM: Protein of unknown function DUF2064; KEGG: fri:FraEuI1c_4150 protein of unknown function DUF2064 YP_004581791.1 PFAM: Glycosyl transferase, family 2; KEGG: fra:Francci3_0979 glycosyl transferase family protein YP_004581792.1 KEGG: fra:Francci3_0978 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004581793.1 KEGG: fra:Francci3_0977 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004581794.1 KEGG: fra:Francci3_0976 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004581797.1 KEGG: fal:FRAAL0761 hypothetical protein; TIGRFAM: putative F420-dependent oxidoreductase, MSMEG_3544 family; PFAM: Luciferase-like, subgroup YP_004581798.1 KEGG: rop:ROP_46980 cytochrome P450; PFAM: Cytochrome P450 YP_004581799.1 KEGG: mav:MAV_0960 hypothetical protein YP_004581800.1 PFAM: Cytochrome c oxidase, subunit III; KEGG: mjl:Mjls_4757 cytochrome c oxidase, subunit III YP_004581802.1 TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: rop:ROP_56810 50S ribosomal protein L28; PFAM: Ribosomal protein L28 YP_004581803.1 TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: mva:Mvan_5490 50S ribosomal protein L33; PFAM: Ribosomal protein L33 YP_004581804.1 KEGG: sgr:SGR_544 putative 30S ribosomal protein S14; HAMAP: 30S ribosomal protein S14; PFAM: Ribosomal protein S14 YP_004581805.1 TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: mau:Micau_4075 50S ribosomal protein L32; PFAM: Ribosomal protein L32p YP_004581806.1 manually curated YP_004581807.1 KEGG: fri:FraEuI1c_4720 hypothetical protein YP_004581808.1 KEGG: pay:PAU_00697 hypothetical protein YP_004581810.1 KEGG: fre:Franean1_7128 hypothetical protein YP_004581811.1 PFAM: Carboxylesterase, type B; KEGG: fre:Franean1_7204 carboxylesterase type B YP_004581813.1 manually curated YP_004581814.1 KEGG: fri:FraEuI1c_6537 acyl-CoA dehydrogenase YP_004581815.1 KEGG: fre:Franean1_6486 hypothetical protein YP_004581816.1 KEGG: gob:Gobs_3300 putative ABC transporter membrane protein YP_004581817.1 KEGG: amd:AMED_1356 ATPase component of ABC-type multidrug transport system; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004581818.1 PFAM: Integrase, catalytic core, phage; KEGG: fra:Francci3_1144 phage integrase YP_004581820.1 KEGG: fra:Francci3_4273 putative plasmid replication initiator protein YP_004581821.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: fra:Francci3_4272 cell divisionFtsK/SpoIIIE YP_004581824.1 KEGG: fra:Francci3_4271 hypothetical protein YP_004581825.1 KEGG: fra:Francci3_4270 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004581826.1 KEGG: fre:Franean1_4421 hypothetical protein YP_004581827.1 TIGRFAM: YVTN beta-propeller repeat; KEGG: fre:Franean1_4419 YVTN beta-propeller repeat-containing protein YP_004581828.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004581829.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004581830.1 KEGG: fra:Francci3_0167 sigma-24; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2 YP_004581831.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein YP_004581832.1 KEGG: cai:Caci_5843 hemerythrin HHE cation binding domain protein; manually curated; PFAM: Haemerythrin/HHE cation-binding motif YP_004581833.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fra:Francci3_0168 NAD-dependent epimerase/dehydratase YP_004581835.1 manually curated; KEGG: sen:SACE_2011 transcriptional regulator YP_004581836.1 KEGG: sro:Sros_9264 transcriptional regulator, AraC family with amidase-like domain; PFAM: ThiJ/PfpI; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004581837.1 KEGG: gob:Gobs_1477 alcohol dehydrogenase zinc-binding domain-containing protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004581838.1 KEGG: amd:AMED_8915 pyridoxamine 5'-phosphate oxidase; TIGRFAM: F420-binding domain, putative; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004581839.1 manually curated; KEGG: fre:Franean1_2332 hypothetical protein YP_004581840.1 KEGG: mil:ML5_4253 hypothetical protein YP_004581841.1 KEGG: fri:FraEuI1c_6387 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004581842.1 PFAM: Toxic anion resistance; KEGG: fre:Franean1_6387 toxic anion resistance family protein YP_004581843.1 KEGG: fre:Franean1_6386 hypothetical protein YP_004581844.1 PFAM: Bacterial stress protein; KEGG: fre:Franean1_6385 stress protein YP_004581845.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: fal:FRAAL3448 glycerophosphoryl diester phosphodiesteraseglycerophosphoryl diester phosphodiesterase YP_004581846.1 PFAM: Small multidrug resistance protein; KEGG: sen:SACE_7214 small multidrug resistance efflux protein YP_004581847.1 PFAM: Thioesterase superfamily; KEGG: rop:ROP_45970 hypothetical protein YP_004581848.1 PFAM: Crotonase, core; KEGG: mav:MAV_0148 enoyl-CoA hydratase/isomerase YP_004581849.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_0343 TetR-family protein transcriptional regulator YP_004581850.1 KEGG: kfl:Kfla_4643 hypothetical protein YP_004581851.1 KEGG: rop:ROP_46810 putative fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004581852.1 PFAM: Crotonase, core; KEGG: fal:FRAAL0396 putative acyl-CoA hydratase YP_004581853.1 KEGG: rrs:RoseRS_3671 hypothetical protein YP_004581854.1 manually curated; KEGG: fre:Franean1_4461 putative transposase YP_004581855.1 PFAM: Nucleotide-binding protein, predicted, TIR-like; KEGG: rpe:RPE_3312 hypothetical protein YP_004581856.1 KEGG: fal:FRAAL3787 hypothetical protein YP_004581857.1 KEGG: fre:Franean1_4905 hypothetical protein YP_004581858.1 KEGG: sna:Snas_3406 hypothetical protein YP_004581859.1 KEGG: nda:Ndas_2122 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004581860.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fal:FRAAL1886 membrane transporter YP_004581861.1 PFAM: CopG-like DNA-binding; KEGG: kfl:Kfla_6535 hypothetical protein YP_004581862.1 KEGG: kfl:Kfla_6534 PilT protein domain protein YP_004581863.1 PFAM: Protein of unknown function DUF307; KEGG: fal:FRAAL0785 hypothetical protein YP_004581864.1 KEGG: sna:Snas_3304 epoxide hydrolase domain-containing protein; PFAM: Epoxide hydrolase, N-terminal; Alpha/beta hydrolase fold-1 YP_004581865.1 PFAM: Plasmid stabilisation system; KEGG: sro:Sros_7793 toxin-like protein YP_004581866.1 KEGG: fri:FraEuI1c_1636 hypothetical protein YP_004581867.1 KEGG: tcu:Tcur_4168 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004581868.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fri:FraEuI1c_3106 extracellular solute-binding protein family 5 YP_004581869.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3108 binding-protein-dependent transport systems inner membrane component YP_004581870.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: fri:FraEuI1c_3109 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004581871.1 TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: msm:MSMEG_2175 nitrilotriacetate monooxygenase component A YP_004581872.1 PFAM: Luciferase-like, subgroup; KEGG: fri:FraEuI1c_4223 luciferase-like, subgroup YP_004581873.1 KEGG: cai:Caci_3793 luciferase-like monooxygenase; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_004581874.1 PFAM: FR47-like; KEGG: fri:FraEuI1c_3113 FR47 domain protein YP_004581876.1 KEGG: sma:SAV_994 conventional protein tyrosine phosphatase YP_004581877.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004581878.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL4180 hypothetical protein YP_004581879.1 TIGRFAM: YVTN beta-propeller repeat; KEGG: mpd:MCP_0927 putative cell surface protein YP_004581881.1 KEGG: fra:Francci3_0405 excisionase/Xis, DNA-binding; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: HTH transcriptional regulator, MerR YP_004581882.1 KEGG: fre:Franean1_5537 hypothetical protein YP_004581883.1 KEGG: fre:Franean1_4555 regulatory protein GntR HTH; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR YP_004581884.1 KEGG: fal:FRAAL1621 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004581885.1 KEGG: fre:Franean1_0372 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding YP_004581886.1 KEGG: fal:FRAAL3212 putative cytochrome P-450 hydroxylase; PFAM: Cytochrome P450 YP_004581887.1 PFAM: FAD dependent oxidoreductase; KEGG: fal:FRAAL3211 putative phytoene dehydrogenase (phytoene desaturase) YP_004581888.1 KEGG: fra:Francci3_1608 cytochrome P450; PFAM: Cytochrome P450 YP_004581889.1 KEGG: fra:Francci3_1935 hypothetical protein YP_004581890.1 KEGG: mau:Micau_2685 hypothetical protein YP_004581891.1 KEGG: sma:SAV_101 polyketide synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Aminotransferase, class I/II YP_004581893.1 KEGG: rru:Rru_A2282 4Fe-4S ferredoxin, iron-sulfur binding; TIGRFAM: Ferredoxin III 4[4Fe-4S], nif-specific; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup YP_004581894.1 KEGG: fra:Francci3_2262 hypothetical protein YP_004581895.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; NIF system FeS cluster assembly, NifU, C-terminal; KEGG: tbi:Tbis_3228 nitrogen-fixing NifU domain-containing protein YP_004581896.1 KEGG: fra:Francci3_1076 hydrogen:quinone oxidoreductase; PFAM: Nickel-dependent hydrogenase, large subunit YP_004581897.1 KEGG: fal:FRAAL1830 [NiFe] uptake hydrogenase small subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit YP_004581898.1 PFAM: Glycosyl transferase, family 2; KEGG: fre:Franean1_3677 glycosyl transferase family protein YP_004581899.1 KEGG: fri:FraEuI1c_6807 hypothetical protein YP_004581900.1 PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: gob:Gobs_3648 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004581901.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fre:Franean1_5339 binding-protein-dependent transport systems inner membrane component YP_004581902.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: fra:Francci3_1592 extracellular solute-binding protein YP_004581903.1 PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; KEGG: saq:Sare_1889 AMP-dependent synthetase and ligase YP_004581904.1 KEGG: fra:Francci3_1068 hypothetical protein YP_004581905.1 KEGG: fra:Francci3_1067 hypothetical protein YP_004581906.1 KEGG: fal:FRAAL5524 putative N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase YP_004581907.1 KEGG: dvi:Dvir_GJ15014 GJ15014 gene product from transcript GJ15014-RA YP_004581908.1 PFAM: Glycosyl transferase, family 39; KEGG: fal:FRAAL3319 putative mannosyltransferase YP_004581909.1 KEGG: fra:Francci3_4425 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004581910.1 HAMAP: Acireductone dioxygenase; KEGG: sma:SAV_6661 oxidase; PFAM: Acireductone dioxygenase, ARD YP_004581911.1 PFAM: Haloacid dehalogenase-like hydrolase; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAMAP: Enolase-phosphatase E1; KEGG: sma:SAV_6660 enolase-phosphatase E-1 YP_004581912.1 TIGRFAM: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; KEGG: fal:FRAAL1411 methylthioribose-1-phosphate isomerase (MTR-1-P isomerase); PFAM: Initiation factor 2B related YP_004581913.1 PFAM: Class II aldolase/adducin, N-terminal; TIGRFAM: Methylthioribulose-1-phosphate dehydratase; HAMAP: Methylthioribulose-1-phosphate dehydratase; KEGG: fri:FraEuI1c_5781 methylthioribulose-1-phosphate dehydratase YP_004581914.1 PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: fra:Francci3_2993 S-adenosylmethionine synthetase YP_004581915.1 KEGG: fri:FraEuI1c_1902 putative F420-dependent enzyme; TIGRFAM: F420-binding domain, putative; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004581916.1 KEGG: tcu:Tcur_2648 hypothetical protein YP_004581917.1 KEGG: ami:Amir_4393 transcriptional regulator, AraC family YP_004581918.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004581919.1 PFAM: Capsule synthesis protein, CapA; KEGG: fre:Franean1_2523 poly-gamma-glutamate synthesis protein YP_004581920.1 KEGG: scb:SCAB_87141 hypothetical protein YP_004581921.1 PFAM: Integrase, catalytic core; Transposase IS3/IS911; KEGG: fre:Franean1_3089 integrase catalytic region YP_004581922.1 KEGG: saq:Sare_4398 hypothetical protein YP_004581923.1 KEGG: tcu:Tcur_1996 glucose-methanol-choline oxidoreductase YP_004581924.1 PFAM: FAD dependent oxidoreductase; KEGG: mau:Micau_2519 GMC oxidoreductase YP_004581925.1 KEGG: sna:Snas_1895 putative D-cysteine desulfhydrase (DcyD) YP_004581926.1 TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: fre:Franean1_1868 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004581927.1 PFAM: Polyketide cyclase/dehydrase; KEGG: fre:Franean1_6670 hypothetical protein YP_004581928.1 KEGG: fre:Franean1_6445 hypothetical protein YP_004581929.1 KEGG: fra:Francci3_1535 ATPase; TIGRFAM: RecB family nuclease, TM0106, putative; SMART: ATPase, AAA+ type, core YP_004581930.1 PFAM: Protein of unknown function DUF820; KEGG: fre:Franean1_6498 hypothetical protein YP_004581931.1 KEGG: fal:FRAAL0736 hypothetical protein YP_004581933.1 PFAM: ABC transporter-like; Forkhead-associated; ABC-2 type transporter; KEGG: fre:Franean1_5286 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; SMART: ATPase, AAA+ type, core; Forkhead-associated YP_004581934.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rha:RHA1_ro01675 chromosome partitioning ATPase protein YP_004581935.1 manually curated YP_004581936.1 PFAM: NUDIX hydrolase domain; KEGG: fre:Franean1_4848 NUDIX hydrolase YP_004581937.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004581938.1 KEGG: mva:Mvan_0355 hypothetical protein YP_004581939.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004581940.1 KEGG: mav:MAV_2582 hypothetical protein YP_004581941.1 KEGG: fra:Francci3_2923 putative transmembrane protein YP_004581942.1 PFAM: Protein of unknown function DUF1353; KEGG: nfa:nfa18350 hypothetical protein YP_004581943.1 KEGG: fra:Francci3_1668 glycogen synthase; TIGRFAM: Glycogen synthase, corynebacterial; PFAM: Glycosyl transferase, group 1 YP_004581944.1 PFAM: Nucleotidyl transferase; TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase; KEGG: fal:FRAAL4553 glucose-1-phosphate adenylyltransferase YP_004581945.1 KEGG: fri:FraEuI1c_6800 glycosyl transferase family 39 YP_004581946.1 PFAM: Glycosyl transferase, family 39; KEGG: mil:ML5_5556 glycosyl transferase family 39 YP_004581947.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: fra:Francci3_3244 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004581949.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004581950.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004581951.1 PFAM: RNA polymerase sigma factor 70, region 4 type 2 YP_004581952.1 KEGG: fal:FRAAL1515 hypothetical protein YP_004581953.1 PFAM: Monooxygenase, FAD-binding; KEGG: bcz:pE33L466_0075 hypothetical protein YP_004581954.1 PFAM: Protein of unknown function DUF1486; Antibiotic biosynthesis monooxygenase; KEGG: gob:Gobs_0144 antibiotic biosynthesis monooxygenase YP_004581955.1 KEGG: fal:FRAAL4386 polyketide beta-ketoacyl synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004581956.1 KEGG: fre:Franean1_2393 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004581957.1 PFAM: Cupin 2, conserved barrel; KEGG: fre:Franean1_2392 cupin 2 domain-containing protein YP_004581958.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: fra:Francci3_2853 cyclase/dehydrase YP_004581959.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: fre:Franean1_2396 antibiotic biosynthesis monooxygenase YP_004581960.1 KEGG: fre:Franean1_2390 putative actinorhodin polyketide synthase acyl carrier protein (ACP) (ActI ORF3) YP_004581961.1 PFAM: Polyketide synthesis cyclase; KEGG: fre:Franean1_2389 polyketide synthesis cyclase YP_004581962.1 KEGG: fre:Franean1_2388 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal YP_004581963.1 PFAM: Protein of unknown function, ATP binding; KEGG: fra:Francci3_2857 hypothetical protein YP_004581964.1 PFAM: Protein of unknown function DUF742; KEGG: fra:Francci3_2858 hypothetical protein YP_004581965.1 PFAM: Dynein light chain-related; KEGG: fre:Franean1_2385 roadblock/LC7 family protein YP_004581966.1 KEGG: fal:FRAAL4397 hypothetical protein; PFAM: Nitrate/nitrite sensing protein NIT; HAMP linker domain; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like YP_004581967.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: fre:Franean1_6454 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; Fibronectin, type III YP_004581968.1 KEGG: fre:Franean1_3751 hypothetical protein YP_004581969.1 PFAM: Protein of unknown function DUF2142, membrane; KEGG: fra:Francci3_2204 hypothetical protein YP_004581970.1 PFAM: ABC-2 type transporter; KEGG: tfu:Tfu_0462 nodulation protein J YP_004581971.1 PFAM: ABC transporter-like; KEGG: cwo:Cwoe_4649 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004581972.1 KEGG: fre:Franean1_1949 putative guanidinoacetate N-methyltransferase YP_004581973.1 PFAM: HpcH/HpaI aldolase; KEGG: fra:Francci3_2805 HpcH/HpaI aldolase YP_004581974.1 KEGG: fra:Francci3_2804 citrate lyase; PFAM: HpcH/HpaI aldolase YP_004581975.1 PFAM: Radical SAM; KEGG: fri:FraEuI1c_6640 radical SAM domain protein YP_004581977.1 PFAM: Cupin 2, conserved barrel; KEGG: fal:FRAAL4827 hypothetical protein YP_004581978.1 SMART: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: fal:FRAAL2659 hypothetical protein YP_004581979.1 KEGG: fri:FraEuI1c_6745 hypothetical protein YP_004581981.1 PFAM: Ryanodine receptor Ryr; Regulator of K+ conductance, N-terminal; KEGG: sro:Sros_3707 hypothetical protein YP_004581982.1 manually curated; KEGG: fal:FRAAL1902 putative dihydroorotate dehydrogenase A (dihydroorotate oxidase A) (DHOdehase A) (DHODase A) (DHOD A); PFAM: Dihydroorotate dehydrogenase, class 1/ 2 YP_004581983.1 KEGG: amd:AMED_6554 hypothetical protein YP_004581984.1 KEGG: fre:Franean1_6479 hypothetical protein YP_004581985.1 KEGG: fra:Francci3_4502 signal-transduction protein; PFAM: Domain of unknown function DUF1918; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core YP_004581986.1 PFAM: Phosphoribosyltransferase; KEGG: sti:Sthe_3452 phosphoribosyltransferase YP_004581987.1 KEGG: fri:FraEuI1c_2128 hypothetical protein YP_004581988.1 PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; KEGG: fre:Franean1_1869 WD-40 repeat-containing serine/threonin protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; WD40 repeat YP_004581989.1 KEGG: fre:Franean1_6994 putative PAS/PAC sensor protein; PFAM: Sporulation stage II, protein E C-terminal; ANTAR; PAS fold-3; SMART: Protein phosphatase 2C-related YP_004581990.1 KEGG: fal:FRAAL6455 putative two-component system sensory histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; HAMP linker domain; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; HAMP linker domain; Signal transduction response regulator, receiver region YP_004581991.1 KEGG: fre:Franean1_6248 putative phosphate binding ABC transporter YP_004581992.1 KEGG: fre:Franean1_0563 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004581993.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL3367 cadmium-induced protein CadI (partial match) YP_004581994.1 PFAM: Major intrinsic protein; KEGG: fra:Francci3_2326 major intrinsic protein YP_004581995.1 KEGG: fre:Franean1_0566 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004581996.1 KEGG: mva:Mvan_3973 putative GAF sensor protein; PFAM: Transcription regulator LuxR, C-terminal; GAF; SMART: Transcription regulator LuxR, C-terminal YP_004581997.1 KEGG: mva:Mvan_0349 response regulator receiver protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal YP_004581998.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004581999.1 KEGG: sma:SAV_63 transcriptional regulatory protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004582000.1 KEGG: sma:SAV_62 transmembrane transport protein YP_004582001.1 KEGG: fri:FraEuI1c_4011 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004582002.1 TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted; KEGG: fri:FraEuI1c_4010 putative F420-dependent oxidoreductase YP_004582003.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mkm:Mkms_5354 glyoxalase/bleomycin resistance protein/dioxygenase YP_004582004.1 PFAM: Putative esterase; KEGG: fri:FraEuI1c_3508 esterase YP_004582007.1 PFAM: Lipase, class 2; KEGG: cwo:Cwoe_1082 lipase class 2 YP_004582008.1 KEGG: fre:Franean1_0497 hypothetical protein YP_004582009.1 KEGG: fal:FRAAL0432 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004582010.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004582011.1 KEGG: fra:Francci3_2750 hypothetical protein YP_004582012.1 KEGG: fre:Franean1_6322 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like YP_004582014.1 PFAM: Protein of unknown function DUF2137; KEGG: mil:ML5_1144 hypothetical protein YP_004582015.1 KEGG: mil:ML5_1143 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004582016.1 KEGG: fre:Franean1_6322 transposase IS4 family protein; manually curated; PFAM: Transposase, IS4-like YP_004582017.1 KEGG: fri:FraEuI1c_6647 hypothetical protein YP_004582018.1 KEGG: fri:FraEuI1c_6648 hypothetical protein YP_004582019.1 PFAM: ATPase associated with various cellular activities, AAA-4; KEGG: saq:Sare_4979 putative transcriptional regulator YP_004582020.1 PFAM: Peptidase M48, Ste24p; KEGG: fre:Franean1_6582 peptidase M48 Ste24p YP_004582021.1 PFAM: Penicillinase repressor; KEGG: fal:FRAAL0596 putative regulator YP_004582022.1 PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: fre:Franean1_6580 cytochrome bd ubiquinol oxidase subunit I YP_004582023.1 PFAM: Cytochrome bd ubiquinol oxidase, subunit II; KEGG: fra:Francci3_0257 cytochrome bd ubiquinol oxidase subunit II YP_004582024.1 PFAM: Abortive infection protein; KEGG: fre:Franean1_6578 abortive infection protein YP_004582025.1 PFAM: CHAD; Adenylate cyclase; KEGG: fre:Franean1_6577 CHAD domain-containing protein YP_004582026.1 SMART: Helix-turn-helix type 3; KEGG: fra:Francci3_2768 XRE family transcriptional regulator YP_004582027.1 KEGG: kfl:Kfla_3437 hypothetical protein YP_004582028.1 KEGG: fri:FraEuI1c_3865 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004582029.1 KEGG: fri:FraEuI1c_3866 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004582030.1 KEGG: fre:Franean1_4926 sulfatase; PFAM: Sulfatase YP_004582031.1 PFAM: Aldo/keto reductase; KEGG: fal:FRAAL0602 putative aldo/keto reductase YP_004582032.1 KEGG: aai:AARI_05450 hypothetical protein YP_004582033.1 KEGG: mva:Mvan_5445 methyltransferase small YP_004582034.1 KEGG: fal:FRAAL0603 cold-shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004582035.1 TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: fre:Franean1_6574 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding YP_004582036.1 KEGG: fre:Franean1_6573 aspartate kinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT YP_004582038.1 PFAM: Bacterial stress protein; KEGG: fre:Franean1_6572 stress protein YP_004582039.1 KEGG: fre:Franean1_6571 alcohol dehydrogenase zinc-binding type 2; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 2; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding YP_004582040.1 PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: gob:Gobs_3761 filamentation induced by cAMP protein Fic YP_004582041.1 KEGG: fal:FRAAL0608 hypothetical protein YP_004582042.1 SMART: Toprim domain, subgroup; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: RecR protein; KEGG: fra:Francci3_0268 recombination protein RecR; HAMAP: Recombination protein recR; PFAM: Toprim domain; Zinc finger C4-type, RecR YP_004582043.1 PFAM: Uncharacterised protein family UPF0133; manually curated; TIGRFAM: Uncharacterised protein family UPF0133; KEGG: fre:Franean1_6565 hypothetical protein; HAMAP: Uncharacterised protein family UPF0133 YP_004582044.1 KEGG: fal:FRAAL5311 transmembrane receptor activity YP_004582045.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004582046.1 KEGG: fri:FraEuI1c_4498 WD40 repeat, subgroup; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat YP_004582047.1 KEGG: fal:FRAAL0557 hypothetical protein YP_004582049.1 KEGG: fal:FRAAL0612 DNA polymerase III subunits gamma and tau; TIGRFAM: DNA polymerase III, subunit gamma/ tau; SMART: ATPase, AAA+ type, core YP_004582051.1 KEGG: fal:FRAAL6491 hypothetical protein YP_004582052.1 KEGG: fra:Francci3_2620 ATPase YP_004582053.1 KEGG: fre:Franean1_0212 hypothetical protein YP_004582054.1 PFAM: Transglycosylase-like; KEGG: fre:Franean1_0213 transglycosylase domain-containing protein YP_004582055.1 PFAM: Transglycosylase-like; Peptidoglycan binding-like; KEGG: fal:FRAAL6657 N-acetylmuramoyl-L-alanine amidase (autolysin) YP_004582056.1 TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; KEGG: fal:FRAAL6655 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II YP_004582058.1 PFAM: SCP-like extracellular; KEGG: fre:Franean1_0219 SCP-like extracellular YP_004582059.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fre:Franean1_0220 NAD-dependent epimerase/dehydratase YP_004582060.1 KEGG: fra:Francci3_4360 hypothetical protein YP_004582061.1 KEGG: fra:Francci3_4359 hypothetical protein YP_004582062.1 PFAM: MMPL; KEGG: fal:FRAAL6646 hypothetical protein YP_004582063.1 KEGG: fal:FRAAL6645 hypothetical protein; HAMAP: Pseudouridine-5'-phosphate glycosidase; PFAM: Indigoidine synthase A like protein YP_004582064.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: fra:Francci3_4356 ATPase AAA-2; SMART: ATPase, AAA+ type, core YP_004582065.1 KEGG: fri:FraEuI1c_0221 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004582066.1 HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region; KEGG: fal:FRAAL6641 heat shock protein (HSP40), co-chaperone with DnaK; SMART: Heat shock protein DnaJ, N-terminal YP_004582067.1 KEGG: fra:Francci3_4353 GrpE protein; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor YP_004582068.1 TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: fri:FraEuI1c_0217 chaperone protein DnaK; PFAM: Heat shock protein 70 YP_004582070.1 KEGG: fra:Francci3_4351 hypothetical protein YP_004582071.1 KEGG: fre:Franean1_0238 hypothetical protein; PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup YP_004582072.1 KEGG: fra:Francci3_2745 hypothetical protein YP_004582073.1 KEGG: fra:Francci3_4348 beta-phosphoglucomutase hydrolase; TIGRFAM: Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase YP_004582074.1 KEGG: fre:Franean1_0241 kojibiose phosphorylase; PFAM: Glycoside hydrolase family 65, central catalytic; Glycoside hydrolase family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal YP_004582075.1 TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; KEGG: fal:FRAAL6635 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain YP_004582076.1 KEGG: fre:Franean1_1560 hypothetical protein YP_004582077.1 PFAM: PilT protein, N-terminal; KEGG: svi:Svir_23550 predicted nucleic acid-binding protein, contains PIN domain protein YP_004582078.1 KEGG: svi:Svir_23560 hypothetical protein YP_004582079.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rso:RS01752 dehydrogenase/reductase oxidoreductase protein YP_004582080.1 KEGG: zma:100279981 1-aminocyclopropane-1-carboxylate synthase7; PFAM: Aminotransferase, class I/II YP_004582081.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004582082.1 KEGG: pfo:Pfl01_5356 hypothetical protein YP_004582083.1 PFAM: Tryptophan 2,3-dioxygenase; KEGG: sna:Snas_1862 tryptophan 2,3-dioxygenase YP_004582084.1 KEGG: svi:Svir_18460 hypothetical protein YP_004582085.1 KEGG: amd:AMED_1499 NAD binding oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal YP_004582086.1 KEGG: fri:FraEuI1c_6784 hypothetical protein YP_004582087.1 TIGRFAM: DivIVA domain; KEGG: nda:Ndas_4396 DivIVA domain protein YP_004582088.1 KEGG: fre:Franean1_1915 O-methyltransferase family protein; PFAM: O-methyltransferase, family 3 YP_004582089.1 KEGG: fre:Franean1_0259 hypothetical protein YP_004582090.1 manually curated; TIGRFAM: Magnesium/cobalt transport protein CorA; KEGG: kfl:Kfla_4857 magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like YP_004582094.1 KEGG: mjl:Mjls_3011 hypothetical protein YP_004582095.1 PFAM: Protein of unknown function DUF81; KEGG: fal:FRAAL6681 transport protein YP_004582097.1 KEGG: fri:FraEuI1c_0282 hypothetical protein YP_004582098.1 KEGG: fre:Franean1_7279 hypothetical protein YP_004582100.1 KEGG: fri:FraEuI1c_0284 hypothetical protein YP_004582101.1 TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: fra:Francci3_0709 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal YP_004582102.1 PFAM: Glycosyl transferase, family 2; KEGG: fre:Franean1_7281 hyaluronan synthase YP_004582103.1 TIGRFAM: parallel beta-helix repeat; KEGG: fre:Franean1_7282 hypothetical protein YP_004582104.1 KEGG: fre:Franean1_7283 hypothetical protein YP_004582105.1 KEGG: fre:Franean1_0282 hypothetical protein YP_004582106.1 KEGG: fal:FRAAL6606 hypothetical protein YP_004582107.1 KEGG: fal:FRAAL6605 hypothetical protein YP_004582108.1 KEGG: fal:FRAAL6604 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-E type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004582111.1 KEGG: sen:SACE_4371 hypothetical protein YP_004582112.1 TIGRFAM: Quinone oxidoreductase putative, PIG3; KEGG: fri:FraEuI1c_0290 NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004582113.1 PFAM: Protein of unknown function DUF2587; KEGG: fra:Francci3_4321 hypothetical protein YP_004582114.1 KEGG: fre:Franean1_0288 hypothetical protein YP_004582115.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: fri:FraEuI1c_0293 peptidase U62 modulator of DNA gyrase YP_004582116.1 KEGG: fal:FRAAL6592 hypothetical protein; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3 YP_004582117.1 KEGG: fre:Franean1_0294 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase YP_004582118.1 PFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; KEGG: fal:FRAAL6590 ATP phosphoribosyltransferase YP_004582119.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: fra:Francci3_4315 GTP cyclohydrolase YP_004582120.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: fal:FRAAL6588 cell division protein FtsH (ATP-dependent zinc-metallo protease); PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular YP_004582121.1 PFAM: PP-loop; Phosphoribosyltransferase; TIGRFAM: Hypoxanthine phosphoribosyl transferase; Lysidine-tRNA(Ile) synthetase, N-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: fre:Franean1_0299 hypoxanthine phosphoribosyltransferase YP_004582122.1 KEGG: fri:FraEuI1c_0308 hypothetical protein; TIGRFAM: uncharacterized protein, coenzyme F420 biosynthesis associated; Protein of unknown function DUF2342; PFAM: Protein of unknown function DUF2342 YP_004582123.1 KEGG: fre:Franean1_0301 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C YP_004582124.1 HAMAP: Inorganic pyrophosphatase; KEGG: fal:FRAAL6584 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_004582125.1 KEGG: fri:FraEuI1c_0312 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004582126.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004582127.1 PFAM: PSP1, C-terminal; KEGG: fre:Franean1_0305 PSP1 domain-containing protein YP_004582128.1 KEGG: mrd:Mrad2831_3885 hypothetical protein YP_004582129.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: fra:Francci3_3623 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004582130.1 KEGG: fra:Francci3_0619 PadR family transcriptional regulator; manually curated; PFAM: Transcriptional regulator PadR N-terminal-like YP_004582131.1 KEGG: sro:Sros_8277 ABC transport system substrate-binding protein YP_004582132.1 PFAM: ABC transporter-like; KEGG: tfu:Tfu_1691 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; SMART: ATPase, AAA+ type, core YP_004582133.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sro:Sros_8275 ABC-type transporter, permease protein YP_004582134.1 TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: cai:Caci_4307 putative nitrilotriacetate monooxygenase YP_004582135.1 PFAM: Peptidoglycan binding-like; KEGG: tra:Trad_2500 peptidoglycan-binding domain 1 protein YP_004582136.1 KEGG: afo:Afer_0828 hypothetical protein YP_004582137.1 KEGG: sma:SAV_1868 hypothetical protein YP_004582138.1 PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: kfl:Kfla_3049 type I phosphodiesterase/nucleotide pyrophosphatase YP_004582139.1 KEGG: fre:Franean1_4956 putative integral membrane protein YP_004582140.1 TIGRFAM: Glycine cleavage system P-protein; HAMAP: Glycine cleavage system P-protein; KEGG: fal:FRAAL6434 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal YP_004582141.1 KEGG: fra:Francci3_2820 hypothetical protein YP_004582142.1 KEGG: fra:Francci3_2821 hypothetical protein YP_004582143.1 KEGG: sro:Sros_6242 hypothetical protein YP_004582144.1 KEGG: sro:Sros_6241 hypothetical protein YP_004582145.1 KEGG: mkm:Mkms_1053 hypothetical protein YP_004582147.1 KEGG: fre:Franean1_0654 hypothetical protein YP_004582148.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fri:FraEuI1c_0523 regulatory protein TetR YP_004582149.1 KEGG: fre:Franean1_0656 MmpL domain-containing protein YP_004582150.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004582151.1 PFAM: Glutamine synthetase, catalytic region; KEGG: fra:Francci3_4059 L-glutamine synthetase YP_004582153.1 PFAM: IucA/IucC; KEGG: fal:FRAAL6425 putative siderophore biosynthetic enzyme YP_004582154.1 KEGG: fre:Franean1_0659 L-lysine 6-monooxygenase (NADPH) YP_004582155.1 TIGRFAM: Diaminobutyrate-2-oxoglutarate transaminase; KEGG: fra:Francci3_4054 aminotransferase; PFAM: Aminotransferase class-III YP_004582156.1 KEGG: fri:FraEuI1c_6724 Cys/Met metabolism pyridoxal-phosphate-dependent protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_004582157.1 TIGRFAM: Cystathionine beta-synthase; KEGG: fre:Franean1_6424 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cystathionine beta-synthase, core YP_004582158.1 KEGG: fal:FRAAL6420 putative diaminopimelate decarboxylase protein; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004582159.1 PFAM: ATP-binding region, ATPase-like; KEGG: fre:Franean1_0664 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_004582160.1 KEGG: fra:Francci3_4050 serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; ATP-binding region, ATPase-like; SMART: Protein phosphatase 2C-related YP_004582161.1 KEGG: fra:Francci3_4049 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; HAMP linker domain; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; HAMP linker domain YP_004582162.1 KEGG: fre:Franean1_0667 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004582163.1 PFAM: Protein of unknown function DUF305; KEGG: fal:FRAAL6297 putative signal peptide YP_004582164.1 PFAM: Glycoside hydrolase 15-related; KEGG: fal:FRAAL6295 putative O-glycosyl hydrolases YP_004582165.1 KEGG: fal:FRAAL6294 hypothetical protein YP_004582166.1 KEGG: fre:Franean1_0742 hypothetical protein YP_004582168.1 PFAM: Glycosyl transferase, family 2; KEGG: fre:Franean1_1856 glycosyl transferase family protein YP_004582169.1 KEGG: fal:FRAAL5057 hypothetical protein YP_004582170.1 PFAM: Glycosyl transferase, family 39; KEGG: fre:Franean1_3663 glycosyl transferase family protein YP_004582171.1 TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: fra:Francci3_3968 hypothetical protein; PFAM: Tetrapyrrole methylase YP_004582172.1 PFAM: Protein of unknown function DUF218; KEGG: fra:Francci3_3967 hypothetical protein YP_004582173.1 KEGG: fal:FRAAL6287 putative branched-chain amino acid binding protein YP_004582174.1 KEGG: fra:Francci3_3965 TatD-related deoxyribonuclease; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related YP_004582175.1 SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: fri:FraEuI1c_0614 ribosomal RNA adenine methylase transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase YP_004582176.1 KEGG: fre:Franean1_0780 hypothetical protein YP_004582177.1 KEGG: fre:Franean1_0779 hypothetical protein YP_004582178.1 KEGG: fre:Franean1_0773 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; manually curated; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_004582179.1 KEGG: fal:FRAAL6277 putative ABC transporter ATP-binding subunit; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004582180.1 KEGG: fra:Francci3_3960 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1 YP_004582181.1 KEGG: fra:Francci3_3961 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; manually curated; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_004582182.1 TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: fal:FRAAL6283 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase YP_004582183.1 KEGG: amd:AMED_2837 hypothetical protein; HAMAP: Uncharacterised protein family UPF0060; PFAM: Uncharacterised protein family UPF0060 YP_004582184.1 TIGRFAM: Ribosomal protein L25; HAMAP: Ribosomal protein L25; KEGG: fre:Franean1_0781 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25, N-terminal YP_004582185.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: fri:FraEuI1c_0624 peptidyl-tRNA hydrolase YP_004582186.1 PFAM: C-methyltransferase; Methyltransferase hyptothetical; Methyltransferase type 12; KEGG: fal:FRAAL6253 putative NDP-hexose 3-C-methyltransferase protein YP_004582187.1 TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; KEGG: fal:FRAAL6237 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004582188.1 KEGG: fre:Franean1_0804 hypothetical protein YP_004582190.1 KEGG: fri:FraEuI1c_0650 MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core YP_004582191.1 KEGG: fal:FRAAL6234 endopeptidase IV (protease IV, signal peptide peptidase); TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49 YP_004582192.1 PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: fal:FRAAL6233 phosphopyruvate hydratase YP_004582193.1 PFAM: Septum formation initiator; KEGG: fal:FRAAL6232 hypothetical protein YP_004582194.1 KEGG: fal:FRAAL6231 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF501 YP_004582195.1 PFAM: Ppx/GppA phosphatase; KEGG: fre:Franean1_0810 Ppx/GppA phosphatase YP_004582196.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004582197.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004582198.1 PFAM: Uracil-DNA glycosylase-like; KEGG: fra:Francci3_3919 uracil-DNA glycosylase superfamily protein YP_004582199.1 manually curated; KEGG: fal:FRAAL6227 putative NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004582200.1 KEGG: bta:787130 similar to collagen, type III, alpha 1 YP_004582201.1 PFAM: Protein of unknown function DUF1112; KEGG: fre:Franean1_0813 hypothetical protein YP_004582202.1 KEGG: fra:Francci3_3915 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; TIGRFAM: F420-binding domain, putative; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004582203.1 KEGG: fra:Francci3_3914 hypothetical protein YP_004582204.1 KEGG: fri:FraEuI1c_0660 hypothetical protein YP_004582205.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fra:Francci3_3910 alpha/beta hydrolase YP_004582206.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; KEGG: fre:Franean1_7031 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAS YP_004582207.1 SMART: von Willebrand factor, type A; KEGG: fal:FRAAL6215 hypothetical protein YP_004582208.1 manually curated; KEGG: fri:FraEuI1c_0666 putative magnesium chelatase YP_004582209.1 KEGG: fra:Francci3_3904 GreA/GreB family elongation factor; TIGRFAM: Prokaryotic transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic YP_004582210.1 KEGG: fre:Franean1_0825 hypothetical protein YP_004582211.1 KEGG: fre:Franean1_0826 LmbE family protein; TIGRFAM: Mycothiol conjugate amidase, Mca; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase YP_004582212.1 PFAM: Tellurite resistance TerB; KEGG: fri:FraEuI1c_2659 tellurium resistance protein YP_004582213.1 KEGG: fre:Franean1_0827 hypothetical protein YP_004582214.1 PFAM: Class I peptide chain release factor; KEGG: fri:FraEuI1c_0672 class I peptide chain release factor YP_004582215.1 KEGG: tcu:Tcur_1213 carboxyl transferase; PFAM: Carboxyl transferase; Crotonase, core YP_004582216.1 TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: fra:Francci3_3901 leucyl-tRNA synthetase YP_004582217.1 KEGG: rha:RHA1_ro08557 hypothetical protein YP_004582218.1 KEGG: fra:Francci3_3900 hypothetical protein YP_004582219.1 KEGG: fre:Franean1_0831 hypothetical protein YP_004582220.1 KEGG: fre:Franean1_0832 hemolysin III family channel protein; TIGRFAM: HylII; PFAM: Hly-III related YP_004582221.1 HAMAP: Phosphoenolpyruvate carboxykinase, GTP-utilising; KEGG: fal:FRAAL6204 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, GTP-utilising YP_004582222.1 KEGG: fre:Franean1_0834 PhoH family protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc YP_004582223.1 PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: fri:FraEuI1c_0677 peptide methionine sulfoxide reductase YP_004582224.1 PFAM: Protein of unknown function DUF1778 YP_004582225.1 KEGG: fra:Francci3_2878 Cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: Cob(II)yrinic acid a,c-diamide reductase; PFAM: Nitroreductase-like YP_004582226.1 PFAM: Polyketide cyclase/dehydrase; KEGG: fri:FraEuI1c_0686 polyketide cyclase/dehydrase YP_004582227.1 KEGG: fal:FRAAL2608 hypothetical protein YP_004582228.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004582229.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004582230.1 KEGG: fre:Franean1_0840 hypothetical protein YP_004582231.1 PFAM: NUDIX hydrolase domain; KEGG: fre:Franean1_0841 NUDIX hydrolase YP_004582232.1 KEGG: fal:FRAAL6154 putative secreted protein; putative beta-lactamase YP_004582233.1 KEGG: fal:FRAAL2348 hypothetical protein YP_004582234.1 KEGG: fri:FraEuI1c_0689 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_004582235.1 HAMAP: Fumarate hydratase class II; KEGG: fra:Francci3_3882 fumarate hydratase; PFAM: Fumarate lyase; Fumarase C, C-terminal YP_004582236.1 KEGG: rcu:RCOM_1443100 Glycoprotein X precursor, putative YP_004582237.1 PFAM: Fatty acid hydroxylase; KEGG: fre:Franean1_0850 fatty acid hydroxylase YP_004582238.1 TIGRFAM: GlpX; KEGG: fal:FRAAL6145 fructose 1,6-bisphosphatase II; PFAM: GlpX YP_004582240.1 KEGG: fra:Francci3_3877 hypothetical protein YP_004582241.1 TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: scb:SCAB_33491 exonuclease small subunit; PFAM: Exonuclease VII, small subunit YP_004582242.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: fre:Franean1_2196 adenosine deaminase YP_004582243.1 KEGG: fal:FRAAL5591 hypothetical protein YP_004582244.1 PFAM: PemK-like protein; KEGG: mtb:TBMG_00868 hypothetical protein YP_004582246.1 PFAM: Glycosyl transferase, family 2; KEGG: fri:FraEuI1c_0702 glycosyl transferase family 2 YP_004582247.1 PFAM: Polysaccharide deacetylase; KEGG: fal:FRAAL1353 hypothetical protein YP_004582248.1 TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; KEGG: fra:Francci3_3880 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type YP_004582249.1 PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: fre:Franean1_0845 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_004582250.1 KEGG: fri:FraEuI1c_0128 hypothetical protein YP_004582251.1 PFAM: Polysaccharide biosynthesis protein; KEGG: fra:Francci3_3847 hypothetical protein YP_004582252.1 PFAM: Glycosyl transferase, group 1; KEGG: fra:Francci3_3848 glycosyl transferase, group 1 YP_004582253.1 KEGG: fra:Francci3_3849 hypothetical protein YP_004582254.1 KEGG: fra:Francci3_3850 hypothetical protein YP_004582255.1 PFAM: Glycosyl transferase, group 1; KEGG: fra:Francci3_3851 glycosyl transferase, group 1 YP_004582256.1 PFAM: Glycosyl transferase, family 2; KEGG: fal:FRAAL6119 putative succinoglycan biosynthesis protein YP_004582257.1 PFAM: Glycosyl transferase, family 2; KEGG: fal:FRAAL6118 putative glycosyltransferase YP_004582259.1 KEGG: fra:Francci3_3873 hypothetical protein YP_004582260.1 PFAM: RmuC; KEGG: fal:FRAAL6141 DNA recombination protein YP_004582261.1 KEGG: fra:Francci3_3871 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related YP_004582262.1 KEGG: cbr:CBG18961 C. briggsae CBR-DRE-1 protein; TIGRFAM: parallel beta-helix repeat; SMART: Toll-Interleukin receptor; Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat YP_004582263.1 KEGG: fal:FRAAL6136 putative pterin-4-alpha-carbinolamine dehydratase (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (pterin carbinolamine dehydratase) (PCD) YP_004582264.1 PFAM: NUDIX hydrolase domain; KEGG: fal:FRAAL6135 7,8-dihydro-8-oxoguanine-triphosphatase YP_004582265.1 KEGG: fra:Francci3_3865 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal YP_004582266.1 PFAM: HTH transcriptional regulator, LysR; KEGG: rha:RHA1_ro03774 hypothetical protein YP_004582267.1 KEGG: rop:ROP_46010 hypothetical protein YP_004582268.1 PFAM: Aminoglycoside phosphotransferase; KEGG: rop:ROP_46010 hypothetical protein YP_004582269.1 KEGG: rop:ROP_46020 hypothetical protein YP_004582270.1 KEGG: mva:Mvan_3374 aminoglycoside phosphotransferase YP_004582271.1 KEGG: fre:Franean1_0865 LmbE family protein; TIGRFAM: Mycothiol biosynthesis protein, MshB; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase YP_004582272.1 KEGG: fre:Franean1_0867 hypothetical protein YP_004582273.1 KEGG: fre:Franean1_0869 putative transcriptional regulator YP_004582274.1 KEGG: fri:FraEuI1c_0710 hypothetical protein YP_004582275.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: fal:FRAAL6126 ferredoxin YP_004582276.1 TIGRFAM: Succinyldiaminopimelate transaminase, actinobacteria; KEGG: fri:FraEuI1c_0712 succinyldiaminopimelate transaminase; PFAM: Aminotransferase, class I/II YP_004582277.1 KEGG: gob:Gobs_3666 PilT domain-containing protein YP_004582278.1 KEGG: fal:FRAAL6124 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004582279.1 TIGRFAM: Succinyl-diaminopimelate desuccinylase; KEGG: fri:FraEuI1c_0714 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation YP_004582280.1 KEGG: fri:FraEuI1c_5802 protein tyrosine/serine phosphatase YP_004582281.1 TIGRFAM: Dihydropteroate synthase; KEGG: fri:FraEuI1c_0717 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS YP_004582282.1 TIGRFAM: DivIVA domain; KEGG: fra:Francci3_3838 hypothetical protein YP_004582283.1 KEGG: saq:Sare_0656 hypothetical protein YP_004582284.1 KEGG: fal:FRAAL6095 leucine aminopeptidase; HAMAP: cytosol aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal YP_004582285.1 PFAM: Methyltransferase type 11; KEGG: fal:FRAAL6092 methyltransferase (O-methyltransferase) YP_004582286.1 KEGG: fre:Franean1_0884 RNA polymerase sigma factor SigE; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004582287.1 KEGG: fra:Francci3_3832 hypothetical protein YP_004582288.1 KEGG: fre:Franean1_0886 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF YP_004582289.1 KEGG: fra:Francci3_3829 sec-independent translocase; TIGRFAM: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106 YP_004582290.1 PFAM: ATPase-like, ParA/MinD; Protein of unknown function DUF59; KEGG: fal:FRAAL6085 ATPase YP_004582291.1 KEGG: fre:Franean1_0889 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004582292.1 KEGG: fra:Francci3_3826 PHP-like protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal YP_004582293.1 KEGG: fre:Franean1_0893 alkaline phosphatase; PFAM: Alkaline phosphatase D-related YP_004582294.1 TIGRFAM: Conserved hypothetical protein CHP00147; PFAM: Diacylglycerol kinase, catalytic region; KEGG: fra:Francci3_3822 hypothetical protein; SMART: Diacylglycerol kinase, catalytic region YP_004582295.1 KEGG: fri:FraEuI1c_5939 serine/threonine-protein kinase-like domain protein; PFAM: Tyrosine-protein kinase, catalytic domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004582296.1 KEGG: fra:Francci3_3823 hypothetical protein YP_004582297.1 PFAM: Aldehyde dehydrogenase; KEGG: fra:Francci3_3825 aldehyde dehydrogenase YP_004582298.1 PFAM: Protein of unknown function DUF2276; KEGG: fri:FraEuI1c_4681 hypothetical protein YP_004582299.1 TIGRFAM: Camphor resistance CrcB protein; HAMAP: CrcB-like protein; KEGG: fri:FraEuI1c_4222 CrcB protein; PFAM: Camphor resistance CrcB protein YP_004582300.1 PFAM: Protein of unknown function DUF190; KEGG: fra:Francci3_2323 hypothetical protein YP_004582301.1 KEGG: fri:FraEuI1c_4220 camphor resistance CrcB protein; HAMAP: CrcB-like protein; PFAM: Camphor resistance CrcB protein YP_004582302.1 PFAM: YCII-related; KEGG: scb:SCAB_36351 transcription regulation protein YP_004582303.1 KEGG: ava:Ava_3250 hypothetical protein YP_004582304.1 PFAM: Protein of unknown function DUF433; KEGG: amd:AMED_1819 hypothetical protein YP_004582305.1 PFAM: DNA methylase N-4/N-6; KEGG: fre:Franean1_1000 DNA methyltransferase YP_004582306.1 PFAM: NUDIX hydrolase domain; KEGG: tbi:Tbis_3001 NUDIX hydrolase YP_004582307.1 PFAM: MaoC-like dehydratase; KEGG: fri:FraEuI1c_0730 MaoC domain protein dehydratase YP_004582308.1 KEGG: nca:Noca_2683 luciferase family protein; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; PFAM: Luciferase-like, subgroup YP_004582309.1 PFAM: Bacterial stress protein; KEGG: fal:FRAAL6074 putative transport associated protein YP_004582310.1 KEGG: fri:FraEuI1c_0736 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004582311.1 KEGG: fre:Franean1_1657 glycoside hydrolase family protein; PFAM: 1, 4-beta cellobiohydrolase YP_004582312.1 KEGG: sgr:SGR_1876 hypothetical protein YP_004582313.1 TIGRFAM: Prevent-host-death protein; KEGG: gob:Gobs_0798 prevent-host-death family protein YP_004582314.1 PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; KEGG: fra:Francci3_3817 MgtE intracellular region YP_004582315.1 PFAM: Protein of unknown function DUF1003; KEGG: fal:FRAAL6069 hypothetical protein YP_004582316.1 TIGRFAM: Chorismate mutase, high GC Gram-positive bacteria/archaeal; KEGG: fra:Francci3_3815 hypothetical protein YP_004582317.1 KEGG: fre:Franean1_0904 hypothetical protein YP_004582318.1 KEGG: fal:FRAAL6066 putative transaminase; PFAM: Aminotransferase, class I/II YP_004582319.1 KEGG: fre:Franean1_0911 hypothetical protein YP_004582320.1 PFAM: Protein of unknown function DUF2236; KEGG: mil:ML5_0946 hypothetical protein YP_004582321.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: fal:FRAAL6064 putative PE-PGRS family protein PE_PGRS54 precursor YP_004582322.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; KEGG: fre:Franean1_0913 hypothetical protein YP_004582323.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: fal:FRAAL6062 putative signal peptide YP_004582324.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: fra:Francci3_3810 cobyrinic acid a,c-diamide synthase YP_004582325.1 manually curated; KEGG: fri:FraEuI1c_0745 hypothetical protein YP_004582326.1 manually curated; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: fra:Francci3_3809 DEAD/DEAH box helicase-like protein; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004582327.1 KEGG: fri:FraEuI1c_0747 hypothetical protein YP_004582328.1 KEGG: fri:FraEuI1c_0748 hypothetical protein YP_004582329.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL6055 TetR family transcriptional regulator YP_004582330.1 KEGG: fri:FraEuI1c_0750 hypothetical protein YP_004582331.1 SMART: DNA helicase, ATP-dependent, Ku type; TIGRFAM: Ku, prokaryotic type; KEGG: fra:Francci3_3805 DNA end-binding protein Ku; HAMAP: DNA repair protein; PFAM: DNA helicase, ATP-dependent, Ku type YP_004582332.1 KEGG: fal:FRAAL6050 molybdopterin biosynthesis-like protein MoeZ; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like YP_004582333.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; KEGG: fre:Franean1_0923 methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding YP_004582334.1 PFAM: DNA helicase, UvrD/REP type; KEGG: fre:Franean1_0925 UvrD/REP helicase YP_004582335.1 PFAM: DNA helicase, UvrD/REP type; KEGG: fra:Francci3_3799 UvrD/REP helicase YP_004582336.1 KEGG: cms:CMS_0860 putative DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004582337.1 KEGG: afo:Afer_0055 hypothetical protein YP_004582338.1 TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: svi:Svir_32570 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib YP_004582339.1 KEGG: fri:FraEuI1c_4745 hypothetical protein YP_004582340.1 KEGG: fal:FRAAL6044 putative sigma factor YP_004582341.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: fre:Franean1_0931 peptidase M16 domain-containing protein YP_004582343.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: fri:FraEuI1c_0762 peptidase M16 domain protein YP_004582344.1 PFAM: ANTAR; KEGG: fra:Francci3_3794 response regulator receiver/ANTAR domain-containing protein YP_004582345.1 KEGG: fra:Francci3_3793 glutaredoxin-like protein GlrX; TIGRFAM: Glutaredoxin-like protein GlrX; PFAM: Glutaredoxin YP_004582346.1 KEGG: fre:Franean1_0935 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; Helicase/RNase D C-terminal, HRDC domain; SMART: Helicase/RNase D C-terminal, HRDC domain YP_004582348.1 PFAM: Transcription factor WhiB; AT hook, DNA-binding motif; KEGG: fre:Franean1_0936 transcription factor WhiB YP_004582349.1 PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: fre:Franean1_0937 type I phosphodiesterase/nucleotide pyrophosphatase YP_004582350.1 KEGG: fre:Franean1_5960 hypothetical protein YP_004582351.1 KEGG: fra:Francci3_0675 hypothetical protein YP_004582352.1 KEGG: fri:FraEuI1c_2615 cytochrome P450; PFAM: Cytochrome P450 YP_004582353.1 KEGG: fri:FraEuI1c_2616 cytochrome P450; PFAM: Cytochrome P450 YP_004582354.1 KEGG: rxy:Rxyl_2802 thiosulfate sulfurtransferase YP_004582355.1 PFAM: ABC-1; KEGG: fal:FRAAL6034 ABC transporter, ATP-binding protein YP_004582356.1 PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: fri:FraEuI1c_0770 UBA/ThiF-type NAD/FAD binding protein YP_004582357.1 KEGG: fri:FraEuI1c_0771 hypothetical protein YP_004582358.1 PFAM: Crotonase, core; KEGG: cai:Caci_7935 enoyl-CoA hydratase/isomerase YP_004582359.1 KEGG: fal:FRAAL6032 hypothetical protein; TIGRFAM: Protein of unknown function DUF2342; PFAM: Protein of unknown function DUF2342 YP_004582360.1 PFAM: Molybdopterin biosynthesis MoaE; KEGG: fra:Francci3_3785 molybdopterin synthase subunit MoaE YP_004582361.1 KEGG: fre:Franean1_0942 hypothetical protein YP_004582362.1 KEGG: fre:Franean1_0943 peptidase S16 lon domain-containing protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF YP_004582363.1 KEGG: fra:Francci3_3782 hypothetical protein YP_004582364.1 KEGG: fal:FRAAL6027 hypothetical protein; HAMAP: Uncharacterised protein family UPF0182; PFAM: Uncharacterised protein family UPF0182 YP_004582365.1 PFAM: Integrase, catalytic core, phage; KEGG: mmc:Mmcs_1422 phage integrase YP_004582368.1 KEGG: pfr:PFREUD_04140 hypothetical protein YP_004582369.1 PFAM: HNH endonuclease; KEGG: fra:Francci3_1198 HNH endonuclease YP_004582370.1 KEGG: fra:Francci3_1197 hypothetical protein YP_004582371.1 KEGG: fra:Francci3_1196 hypothetical protein YP_004582372.1 KEGG: fri:FraEuI1c_6850 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004582373.1 PFAM: Divalent ion tolerance protein, CutA1; KEGG: gob:Gobs_1230 CutA1 divalent ion tolerance protein YP_004582374.1 KEGG: cel:ZK84.1 hypothetical protein YP_004582377.1 KEGG: fri:FraEuI1c_3999 hypothetical protein YP_004582378.1 KEGG: fra:Francci3_3780 hypothetical protein YP_004582379.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: fre:Franean1_0022 extracellular solute-binding protein YP_004582380.1 KEGG: afo:Afer_1190 aminotransferase class-III; PFAM: Aminotransferase class-III YP_004582381.1 KEGG: fal:FRAAL6024 putative glutamate-1-semialdehyde aminotransferase (aminomutase), PLP-dependent; PFAM: Aminotransferase class-III YP_004582382.1 KEGG: fal:FRAAL6022 gamma-aminobutyraldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004582383.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fre:Franean1_0952 alpha/beta hydrolase fold YP_004582384.1 KEGG: fra:Francci3_3775 hypothetical protein YP_004582385.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: fra:Francci3_3774 glycerophosphoryl diester phosphodiesterase YP_004582386.1 KEGG: fra:Francci3_3773 histidinol-phosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase, putative, inositol monophosphatase; PFAM: Inositol monophosphatase YP_004582387.1 PFAM: GTPase EngC; KEGG: fri:FraEuI1c_0790 GTPase EngC YP_004582388.1 PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: fra:Francci3_3771 3-phosphoshikimate 1-carboxyvinyltransferase YP_004582389.1 PFAM: Methyltransferase type 11; KEGG: fal:FRAAL6012 hypothetical protein YP_004582390.1 KEGG: fre:Franean1_0960 hypothetical protein YP_004582391.1 KEGG: fri:FraEuI1c_0794 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004582392.1 TIGRFAM: Anti-sigma factor RshA; KEGG: fra:Francci3_3767 anti-sigma factor YP_004582393.1 KEGG: fre:Franean1_0963 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004582395.1 KEGG: fal:FRAAL6006 hypothetical protein YP_004582396.1 PFAM: Biotin/lipoyl attachment; KEGG: fra:Francci3_3765 biotin/lipoyl attachment YP_004582397.1 manually curated; KEGG: cai:Caci_7732 hypothetical protein YP_004582398.1 KEGG: fre:Franean1_0967 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; TIGRFAM: Biotin synthase; HAMAP: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB YP_004582399.1 TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; KEGG: cai:Caci_7723 dithiobiotin synthetase YP_004582400.1 KEGG: fre:Franean1_0969 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II YP_004582401.1 KEGG: fra:Francci3_3760 signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like YP_004582402.1 PFAM: Transcription factor WhiB; KEGG: fal:FRAAL5998 WhiB family cell cycle control transcriptional regulator YP_004582403.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: fra:Francci3_3758 glycerophosphoryl diester phosphodiesterase YP_004582404.1 KEGG: fri:FraEuI1c_0806 diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase, catalytic region; SMART: Diacylglycerol kinase, catalytic region YP_004582405.1 KEGG: fra:Francci3_3756 hypothetical protein YP_004582406.1 KEGG: fre:Franean1_0974 FliA/WhiG family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-B/F/G type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4 YP_004582407.1 KEGG: fre:Franean1_0975 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_004582408.1 TIGRFAM: Superoxide dismutase, Nickel-type; KEGG: fri:FraEuI1c_0811 superoxide dismutase, Ni; PFAM: Superoxide dismutase, Nickel-type YP_004582409.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: fre:Franean1_0978 putative phage repressor YP_004582410.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: fra:Francci3_3752 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related YP_004582411.1 PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: fre:Franean1_0980 malate dehydrogenase YP_004582412.1 KEGG: fre:Franean1_0981 hypothetical protein YP_004582413.1 PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: fre:Franean1_0982 alcohol dehydrogenase YP_004582414.1 KEGG: fre:Franean1_0983 hypothetical protein YP_004582415.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: fre:Franean1_0984 alpha-ketoglutarate decarboxylase; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoacid dehydrogenase acyltransferase, catalytic domain YP_004582416.1 KEGG: fre:Franean1_0985 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal YP_004582417.1 KEGG: fal:FRAAL5978 hypothetical protein; manually curated; PFAM: Acetamidase/Formamidase YP_004582418.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004582419.1 KEGG: sgr:SGR_3925 putative lipoprotein YP_004582420.1 KEGG: fal:FRAAL1187 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein YP_004582421.1 TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: fra:Francci3_0679 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal YP_004582422.1 KEGG: fal:FRAAL1189 succinate dehydrogenase hydrophobic membrane anchor protein YP_004582423.1 KEGG: fra:Francci3_0681 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit YP_004582424.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: fal:FRAAL1191 putative serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004582425.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: fra:Francci3_0683 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004582426.1 KEGG: fri:FraEuI1c_6746 hypothetical protein YP_004582427.1 KEGG: fre:Franean1_5935 cytidine deaminase; TIGRFAM: Cytidine deaminase, homotetrameric; PFAM: CMP/dCMP deaminase, zinc-binding YP_004582428.1 TIGRFAM: Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic; KEGG: fra:Francci3_0685 thymidine phosphorylase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; Pyrimidine nucleoside phosphorylase, C-terminal YP_004582430.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: fre:Franean1_5933 adenosine deaminase YP_004582431.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: fri:FraEuI1c_6138 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase YP_004582433.1 KEGG: fre:Franean1_5921 deoxyribose-phosphate aldolase; manually curated; TIGRFAM: Deoxyribose-phosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; HAMAP: Deoxyribose-phosphate aldolase YP_004582434.1 KEGG: fri:FraEuI1c_6133 uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; PFAM: Phosphoribosyltransferase YP_004582435.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; KEGG: fre:Franean1_5923 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_004582436.1 TIGRFAM: Putative purine nucleotide phosphorylase; Inosine guanosine/xanthosine phosphorylase; KEGG: fri:FraEuI1c_6131 purine nucleotide phosphorylase; PFAM: Nucleoside phosphorylase YP_004582437.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: pfr:PFREUD_11200 permeases of the drug/metabolite transporter (DMT) superfamily YP_004582439.1 TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; KEGG: mil:ML5_1053 methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic YP_004582440.1 KEGG: fri:FraEuI1c_6130 hypothetical protein YP_004582442.1 PFAM: Pentapeptide repeat; KEGG: fre:Franean1_5019 pentapeptide repeat-containing protein YP_004582443.1 KEGG: fri:FraEuI1c_1149 hypothetical protein YP_004582444.1 TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: fra:Francci3_0692 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain YP_004582445.1 TIGRFAM: Carboxylate-amine ligase, predicted; HAMAP: Carboxylate-amine ligase ybdK; KEGG: fri:FraEuI1c_6126 glutamate--cysteine ligase GCS2; PFAM: Glutamate--cysteine ligase, GCS2 YP_004582446.1 TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: fre:Franean1_5928 amidohydrolase; PFAM: Peptidase M20 YP_004582447.1 KEGG: fri:FraEuI1c_2169 MmpL domain-containing protein YP_004582448.1 KEGG: nde:NIDE2963 putative MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004582449.1 PFAM: AIG2-like; KEGG: fra:Francci3_0695 hypothetical protein YP_004582450.1 KEGG: fre:Franean1_5930 flavoprotein disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_004582451.1 KEGG: fre:Franean1_5920 hypothetical protein YP_004582452.1 KEGG: fre:Franean1_5916 carbamoyl-phosphate synthase L chain ATP-binding; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment YP_004582453.1 KEGG: fal:FRAAL1211 hypothetical protein YP_004582454.1 manually curated; KEGG: fra:Francci3_0700 carboxyl transferase; PFAM: Carboxyl transferase YP_004582455.1 KEGG: fra:Francci3_0701 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal YP_004582456.1 PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: fri:FraEuI1c_6117 membrane-flanked domain protein YP_004582457.1 KEGG: fri:FraEuI1c_4828 heat shock protein 70 YP_004582458.1 PFAM: GtrA-like protein; KEGG: fal:FRAAL1220 hypothetical protein YP_004582459.1 PFAM: Carbonic anhydrase; KEGG: fre:Franean1_5906 carbonic anhydrase YP_004582460.1 KEGG: fri:FraEuI1c_6111 AMP-dependent synthetase and ligase; TIGRFAM: Conserved hypothetical protein CHP03089; PFAM: AMP-dependent synthetase/ligase YP_004582461.1 KEGG: fra:Francci3_0711 cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator YP_004582462.1 KEGG: fal:FRAAL1229 putative membrane-bound transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator YP_004582463.1 TIGRFAM: Glucose-1-phosphate thymidylyltransferase, short form; KEGG: fre:Franean1_5901 glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase YP_004582464.1 KEGG: fal:FRAAL1227 hypothetical protein YP_004582465.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: fre:Franean1_5899 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004582466.1 PFAM: Aminoacyl-tRNA synthetase, class I (M); TIGRFAM: Methionyl-tRNA synthetase, class Ia; HAMAP: Methionyl-tRNA synthetase; KEGG: fre:Franean1_5898 methionyl-tRNA synthetase YP_004582467.1 KEGG: fra:Francci3_0718 hypothetical protein YP_004582468.1 KEGG: fre:Franean1_7260 hypothetical protein YP_004582469.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: fra:Francci3_3244 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004582470.1 KEGG: sco:SCO7080 insertion element transposase YP_004582471.1 KEGG: fri:FraEuI1c_5845 regulator of chromosome condensation RCC1 YP_004582472.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004582473.1 PFAM: Glycosyl transferase, group 1; KEGG: fre:Franean1_5894 glycosyl transferase group 1 YP_004582474.1 PFAM: Glycosyl transferase, group 1; KEGG: fra:Francci3_0721 glycosyl transferase, group 1 YP_004582475.1 PFAM: Glycosyl transferase, family 2; KEGG: fal:FRAAL1237 putative glycosyl transferase YP_004582476.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL1238 ABC transporter ATP-binding protein (partial match); SMART: ATPase, AAA+ type, core YP_004582477.1 PFAM: ABC-2 type transporter; KEGG: fra:Francci3_0724 hypothetical protein YP_004582478.1 KEGG: fra:Francci3_0725 HAD superfamily hydrolase-like protein YP_004582479.1 KEGG: fre:Franean1_5888 hypothetical protein YP_004582480.1 KEGG: fre:Franean1_5885 hypothetical protein YP_004582481.1 KEGG: fra:Francci3_0729 isoleucine patch superfamily acetyltransferase YP_004582482.1 PFAM: Glycosyl transferase, family 2; KEGG: fra:Francci3_0730 glycosyl transferase family protein YP_004582483.1 PFAM: Glycosyl transferase, group 1; KEGG: fre:Franean1_5882 glycosyl transferase group 1 YP_004582484.1 KEGG: fre:Franean1_1111 serine/threonine protein kinase with PASTA sensor(s) YP_004582487.1 KEGG: afo:Afer_0055 hypothetical protein YP_004582489.1 KEGG: fre:Franean1_2178 hypothetical protein YP_004582490.1 KEGG: fra:Francci3_0142 prevent-host-death protein YP_004582491.1 PFAM: Methyltransferase type 11; KEGG: fra:Francci3_0732 methyltransferase type 11 YP_004582492.1 PFAM: Glycosyl transferase, group 1; KEGG: fre:Franean1_5879 glycosyl transferase group 1 YP_004582493.1 PFAM: Glycosyl transferase, group 1; KEGG: fra:Francci3_0735 glycosyl transferase, group 1 YP_004582494.1 PFAM: Glycosyl transferase, family 2; KEGG: fal:FRAAL1254 putative dTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase YP_004582495.1 PFAM: Protein of unknown function DUF820; KEGG: nfa:nfa42190 hypothetical protein YP_004582496.1 PFAM: Bacterial NAD-glutamate dehydrogenase; KEGG: fal:FRAAL0156 putative NAD-specific glutamate dehydrogenase (NAD-GDH) YP_004582497.1 KEGG: fra:Francci3_0737 nucleotidyl transferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat YP_004582498.1 KEGG: fal:FRAAL1258 hypothetical protein YP_004582499.1 KEGG: fal:FRAAL1259 F420-0--gamma-glutamyl ligase; TIGRFAM: Coenzyme F420 biosynthesis protein FbiB, C-terminal; F420-0:gamma-glutamyl ligase; PFAM: F420-0:gamma-glutamyl ligase-related; Nitroreductase-like YP_004582500.1 TIGRFAM: LPPG:Fo 2-phospho-L-lactate transferase; HAMAP: LPPG:FO 2-phospho-L-lactate transferase; KEGG: fal:FRAAL1260 LPPG:FO 2-phospho-L-lactate transferase; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YP_004582501.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_5867 TetR family transcriptional regulator YP_004582502.1 KEGG: fal:FRAAL1262 hypothetical protein YP_004582505.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Complex F420, CofH; FO synthase, subunit 1; FO synthase, subunit 2; KEGG: fal:FRAAL1263 FO synthase; HAMAP: FO synthase subunit 1; PFAM: Radical SAM YP_004582506.1 PFAM: Transcription factor WhiB; KEGG: fre:Franean1_5864 transcription factor WhiB YP_004582507.1 KEGG: fre:Franean1_5863 hypothetical protein YP_004582508.1 KEGG: fre:Franean1_5862 hypothetical protein YP_004582511.1 KEGG: fri:FraEuI1c_6064 mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type I YP_004582512.1 PFAM: Protein of unknown function DUF1025; KEGG: fre:Franean1_5860 hypothetical protein YP_004582513.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: fra:Francci3_0751 phosphomannomutase/phosphoglucomutase YP_004582514.1 PFAM: Protein of unknown function DUF343; KEGG: fri:FraEuI1c_6060 protein of unknown function DUF343 YP_004582515.1 PFAM: Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase, C-terminal; Sugar isomerase (SIS); KEGG: fal:FRAAL1273 hypothetical protein YP_004582516.1 KEGG: fal:FRAAL1281 putative penicillin-binding transpeptidase (partial match); PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase YP_004582517.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: S-adenosyl-L-homocysteine hydrolase; HAMAP: Adenosylhomocysteinase; KEGG: fal:FRAAL1283 S-adenosyl-L-homocysteine hydrolase YP_004582518.1 PFAM: RDD; KEGG: fra:Francci3_0755 RDD YP_004582519.1 PFAM: Protein of unknown function DUF95, transmembrane; KEGG: fre:Franean1_5852 hypothetical protein YP_004582520.1 PFAM: Protein of unknown function DUF58; KEGG: fra:Francci3_0758 hypothetical protein YP_004582521.1 KEGG: fal:FRAAL1298 putative regulatory protein; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core YP_004582522.1 manually curated; KEGG: fal:FRAAL1299 hypothetical protein YP_004582523.1 KEGG: fri:FraEuI1c_6048 putative integral membrane protein YP_004582524.1 PFAM: Glycerophosphoryl diester phosphodiesterase, membrane domain; KEGG: fal:FRAAL1301 putative integral membrane protein YP_004582525.1 KEGG: fri:FraEuI1c_6046 hypothetical protein YP_004582526.1 KEGG: fre:Franean1_5841 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein YP_004582527.1 KEGG: fri:FraEuI1c_6044 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal YP_004582528.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL1305 putative acetyltransferase YP_004582529.1 TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: fal:FRAAL1306 preprotein translocase subunit SecA; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif YP_004582530.1 KEGG: fra:Francci3_0768 hypothetical protein YP_004582531.1 PFAM: Peptidoglycan-binding lysin domain; KEGG: fra:Francci3_0769 hypothetical protein YP_004582532.1 KEGG: fra:Francci3_0770 hypothetical protein YP_004582533.1 KEGG: fre:Franean1_5834 phage transcriptional regulator, AlpA; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Prophage CP4-57 regulatory YP_004582534.1 PFAM: SAF domain; KEGG: fre:Franean1_5833 SAF domain-containing protein YP_004582535.1 KEGG: fal:FRAAL1312 hypothetical protein YP_004582536.1 KEGG: fra:Francci3_0774 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004582537.1 PFAM: Patatin; KEGG: fra:Francci3_0775 patatin YP_004582538.1 KEGG: fri:FraEuI1c_6033 hypothetical protein YP_004582539.1 TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; KEGG: cai:Caci_0647 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004582540.1 KEGG: fal:FRAAL1317 hypothetical protein YP_004582541.1 PFAM: Type II secretion system protein E; KEGG: fra:Francci3_0779 type II secretion system protein E YP_004582542.1 PFAM: Type II secretion system F domain; KEGG: fra:Francci3_0780 type II secretion system protein YP_004582543.1 PFAM: Type II secretion system F domain; KEGG: fal:FRAAL1321 hypothetical protein YP_004582544.1 KEGG: fal:FRAAL1322 hypothetical protein YP_004582545.1 KEGG: fal:FRAAL1323 hypothetical protein YP_004582546.1 KEGG: fra:Francci3_0784 hypothetical protein YP_004582547.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL2920 GNAT family acetyltransferase YP_004582548.1 PFAM: ATPase, AFG1-like; KEGG: pau:PA14_58880 putative ATPase YP_004582549.1 PFAM: Protein of unknown function DUF2134, membrane; KEGG: fre:Franean1_5800 hypothetical protein YP_004582550.1 KEGG: cai:Caci_2671 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004582551.1 KEGG: fre:Franean1_1420 transposase YP_004582552.1 KEGG: fra:Francci3_0789 hypothetical protein YP_004582554.1 TIGRFAM: Peptide chain release factor 2; HAMAP: Peptide chain release factor 2, bacterial; KEGG: fre:Franean1_5798 peptide chain release factor 2; PFAM: Class I peptide chain release factor; Peptide chain release factor YP_004582555.1 KEGG: cyc:PCC7424_5575 hypothetical protein YP_004582556.1 TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: fra:Francci3_0796 uroporphyrinogen-III C-methyltransferase; PFAM: Tetrapyrrole methylase YP_004582557.1 KEGG: mil:ML5_2026 membrane protein-like protein YP_004582558.1 KEGG: fre:Franean1_5795 hypothetical protein YP_004582559.1 KEGG: fre:Franean1_5794 glucose sorbosone dehydrogenase YP_004582560.1 KEGG: fre:Franean1_5793 hypothetical protein YP_004582561.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Cell division ATP-binding protein FtsE; KEGG: fre:Franean1_5792 cell division ATP-binding protein FtsE; PFAM: ABC transporter-like YP_004582562.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: fal:FRAAL1362 cell division protein FtsX YP_004582563.1 TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: fre:Franean1_5790 SsrA-binding protein; PFAM: SsrA-binding protein YP_004582566.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fri:FraEuI1c_0429 regulatory protein TetR YP_004582567.1 KEGG: fri:FraEuI1c_0428 alpha/beta hydrolase fold protein YP_004582568.1 KEGG: fre:Franean1_1538 hypothetical protein YP_004582569.1 KEGG: fra:Francci3_2958 transcriptional modulator of MazE/toxin, MazF YP_004582570.1 TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; KEGG: fre:Franean1_5222 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib YP_004582571.1 KEGG: fal:FRAAL1131 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004582572.1 KEGG: fra:Francci3_0629 phosphodiesterase; HAMAP: FMN-dependent NADH-azoreductase; PFAM: Flavodoxin-like fold YP_004582573.1 TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: bse:Bsel_2404 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase YP_004582574.1 KEGG: fri:FraEuI1c_3777 putative signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core YP_004582575.1 KEGG: fre:Franean1_3628 hypothetical protein YP_004582576.1 KEGG: fre:Franean1_1274 hypothetical protein YP_004582577.1 KEGG: fre:Franean1_1274 hypothetical protein YP_004582578.1 KEGG: fal:FRAAL5659 beta-glucan endohydrolase YP_004582579.1 PFAM: MMPL; KEGG: fal:FRAAL1424 putative integral membrane export protein YP_004582580.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_5720 TetR family transcriptional regulator YP_004582581.1 PFAM: Protein of unknown function DUF192; KEGG: fre:Franean1_5719 hypothetical protein YP_004582582.1 KEGG: fre:Franean1_5718 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004582583.1 TIGRFAM: Squalene synthase HpnC; KEGG: fal:FRAAL1428 putative phytoene synthase; PFAM: Squalene/phytoene synthase YP_004582584.1 TIGRFAM: Squalene/phytoene synthase HpnD; KEGG: fre:Franean1_5716 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase YP_004582585.1 KEGG: fri:FraEuI1c_5919 squalene-associated FAD-dependent desaturase; TIGRFAM: Squalene-associated FAD-dependent desaturase; PFAM: Amine oxidase YP_004582586.1 KEGG: fal:FRAAL1431 geranylgeranyl pyrophosphate synthetase; PFAM: Polyprenyl synthetase YP_004582587.1 TIGRFAM: Hopene cyclase; Squalene cyclase; KEGG: fre:Franean1_5713 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_004582588.1 PFAM: LytB protein; Nucleoside phosphorylase; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: fre:Franean1_5712 hydroxymethylbutenyl pyrophosphate reductase YP_004582589.1 KEGG: sma:SAV_5441 hypothetical protein YP_004582590.1 TIGRFAM: Methyltransferase FkbM; KEGG: fre:Franean1_5298 FkbM family methyltransferase YP_004582592.1 KEGG: fri:FraEuI1c_5897 ABC transporter substrate-binding protein; PFAM: Serine/threonine-protein kinase-like domain; NMT1/THI5 like; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004582594.1 TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM; KEGG: fra:Francci3_0827 radical SAM family protein; SMART: Elongator protein 3/MiaB/NifB YP_004582595.1 KEGG: fre:Franean1_5710 TetR family transcriptional regulator; manually curated; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal YP_004582597.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004582598.1 KEGG: fra:Francci3_0826 phenylacetic acid degradation-related protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily YP_004582599.1 KEGG: fri:FraEuI1c_5910 putative urease accessory protein UreD; HAMAP: Urease accessory protein UreD; PFAM: Urease accessory protein UreD YP_004582600.1 TIGRFAM: Urease accessory protein UreG; HAMAP: Urease accessory protein UreG; KEGG: fri:FraEuI1c_5911 urease accessory protein UreG; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like YP_004582601.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004582602.1 KEGG: kfl:Kfla_6533 hypothetical protein YP_004582603.1 HAMAP: Urease accessory protein UreF; KEGG: fra:Francci3_0831 putative urease accessory protein YP_004582606.1 PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; TIGRFAM: Urease, alpha subunit; HAMAP: Urease subunit alpha; KEGG: fal:FRAAL1447 urease subunit alpha YP_004582607.1 PFAM: Urease, beta subunit; TIGRFAM: Urease, beta subunit; HAMAP: Urease subunit beta; KEGG: fal:FRAAL1448 urease subunit beta YP_004582608.1 PFAM: Urease, alpha/gamma subunit; TIGRFAM: Urease, alpha/gamma subunit; HAMAP: Urease, gamma subunit; KEGG: fra:Francci3_0834 urease subunit gamma YP_004582609.1 KEGG: fal:FRAAL1454 putative adenine deaminase; PFAM: Amidohydrolase 1 YP_004582610.1 KEGG: ade:Adeh_0244 LigA YP_004582611.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: fre:Franean1_5685 Rieske (2Fe-2S) domain-containing protein YP_004582612.1 PFAM: Molybdopterin dehydrogenase, FAD-binding; KEGG: fre:Franean1_5684 molybdopterin dehydrogenase FAD-binding YP_004582613.1 PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: fra:Francci3_0837 (2Fe-2S)-binding YP_004582614.1 PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; manually curated; KEGG: fre:Franean1_5682 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; TIGRFAM: Xanthine dehydrogenase D subunit YP_004582615.1 TIGRFAM: Allantoicase; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2; KEGG: fra:Francci3_0840 putative bifunctional allantoicase/OHCU decarboxylase; PFAM: Allantoicase region; Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_004582616.1 KEGG: fri:FraEuI1c_5884 hydroxyisourate hydrolase; TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase YP_004582617.1 PFAM: HpcH/HpaI aldolase; KEGG: fre:Franean1_5678 HpcH/HpaI aldolase YP_004582618.1 PFAM: Protein of unknown function DUF202; KEGG: fri:FraEuI1c_1656 protein of unknown function DUF202 YP_004582619.1 PFAM: Protein of unknown function DUF202 YP_004582620.1 PFAM: ATPase associated with various cellular activities, AAA-4; KEGG: fre:Franean1_7144 putative transcriptional regulator YP_004582621.1 KEGG: fal:FRAAL1710 putative ATP/GTP binding protein YP_004582622.1 KEGG: fre:Franean1_2423 cobalt-precorrin-6A synthase; HAMAP: Cobalamin (vitamin B12) biosynthesis CbiD; PFAM: Cobalamin (vitamin B12) biosynthesis CbiD YP_004582623.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; KEGG: fre:Franean1_5478 cobalt-precorrin-6x reductase; PFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase YP_004582624.1 KEGG: fal:FRAAL2332 precorrin-8X methylmutase; PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core YP_004582625.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; KEGG: fre:Franean1_4969 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Tetrapyrrole methylase; Methyltransferase type 12 YP_004582627.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004582628.1 KEGG: fra:Francci3_2130 transposase, IS4 YP_004582629.1 PFAM: Protein of unknown function DUF86; KEGG: fra:Francci3_2193 hypothetical protein YP_004582630.1 PFAM: Nucleotidyltransferase; KEGG: fra:Francci3_2192 DNA polymerase, beta-like region YP_004582631.1 KEGG: fri:FraEuI1c_5874 amidohydrolase; PFAM: Amidohydrolase 1 YP_004582632.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: fal:FRAAL1475 putative rRNA methylase YP_004582633.1 TIGRFAM: Putative agmatinase; KEGG: fre:Franean1_5671 putative agmatinase; PFAM: Ureohydrolase YP_004582634.1 KEGG: fra:Francci3_0849 hypothetical protein YP_004582635.1 KEGG: fal:FRAAL1481 hypothetical protein YP_004582636.1 KEGG: fal:FRAAL1482 putative Leu/Ile/Val/Thr-binding protein precursor; putative signal peptide YP_004582637.1 KEGG: fal:FRAAL1483 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004582638.1 PFAM: ABC transporter-like; KEGG: fre:Franean1_5665 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004582639.1 PFAM: Bacterial inner-membrane translocator; KEGG: fre:Franean1_5664 inner-membrane translocator YP_004582640.1 KEGG: fri:FraEuI1c_5861 hypothetical protein YP_004582641.1 KEGG: fre:Franean1_5662 hypothetical protein YP_004582642.1 KEGG: fal:FRAAL1490 putative UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004582643.1 KEGG: fre:Franean1_5660 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004582644.1 KEGG: fre:Franean1_5659 hypothetical protein YP_004582645.1 PFAM: NUDIX hydrolase domain; KEGG: fra:Francci3_0861 NUDIX hydrolase YP_004582646.1 TIGRFAM: Nicotinate phosphoribosyltransferase putative; KEGG: fri:FraEuI1c_5857 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_004582647.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004582648.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: tbi:Tbis_2829 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted YP_004582649.1 KEGG: mil:ML5_6219 diguanylate cyclase/phosphodiesterase YP_004582650.1 KEGG: fra:Francci3_0864 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adapter protein clpS; PFAM: Adaptor protein ClpS, core YP_004582652.1 PFAM: Domain of unknown function DUF2017; KEGG: fra:Francci3_0865 hypothetical protein YP_004582653.1 KEGG: fra:Francci3_0866 Mov34/MPN/PAD-1; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1 YP_004582654.1 PFAM: ThiamineS; KEGG: fre:Franean1_5653 thiamineS protein YP_004582655.1 TIGRFAM: Cysteine synthase K/M; KEGG: fal:FRAAL1500 cysteine synthase B (O-acetylserine sulfhydrolase B); PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_004582656.1 KEGG: fre:Franean1_5649 beta-lactamase domain-containing protein YP_004582657.1 KEGG: fri:FraEuI1c_5805 ribonuclease PH; manually curated; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; HAMAP: Ribonuclease phosphorolytic, bacterial-type YP_004582658.1 PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: fri:FraEuI1c_5804 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_004582659.1 KEGG: fra:Francci3_3870 hypothetical protein YP_004582660.1 KEGG: nml:Namu_2018 pyridoxamine 5'-phosphate oxidase-like protein; TIGRFAM: Probable F420-dependent enzyme, PPOX class, family Rv0121; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004582661.1 PFAM: PemK-like protein; KEGG: mbt:JTY_2003 hypothetical protein YP_004582662.1 PFAM: CopG-like DNA-binding; KEGG: mtb:TBMG_01995 antitoxin YP_004582663.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004582664.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004582665.1 KEGG: fra:Francci3_0278 hypothetical protein YP_004582666.1 PFAM: Phage Gp37Gp68; KEGG: mbt:JTY_2741 hypothetical protein YP_004582667.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004582668.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004582669.1 PFAM: Pentapeptide repeat; KEGG: fre:Franean1_6261 pentapeptide repeat-containing protein YP_004582670.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004582671.1 PFAM: NUDIX hydrolase domain; KEGG: nml:Namu_0473 hypothetical protein YP_004582672.1 KEGG: nfa:nfa2260 hypothetical protein YP_004582673.1 KEGG: fri:FraEuI1c_5815 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated; SMART: HTH transcriptional regulator, GntR YP_004582674.1 PFAM: Transcription factor WhiB YP_004582678.1 PFAM: Transcription factor WhiB; KEGG: transcription factor WhiB YP_004582679.1 KEGG: fri:FraEuI1c_5822 hypothetical protein YP_004582680.1 KEGG: fri:FraEuI1c_5823 hypothetical protein YP_004582681.1 KEGG: fri:FraEuI1c_5824 hypothetical protein YP_004582682.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: fri:FraEuI1c_5825 lytic transglycosylase catalytic YP_004582683.1 KEGG: fri:FraEuI1c_5826 hypothetical protein YP_004582684.1 KEGG: fri:FraEuI1c_5827 hypothetical protein YP_004582685.1 SMART: ATPase, AAA+ type, core; KEGG: fri:FraEuI1c_5828 hypothetical protein YP_004582686.1 PFAM: NUDIX hydrolase domain; KEGG: amd:AMED_0371 DNA hydrolase YP_004582687.1 KEGG: fri:FraEuI1c_5834 hypothetical protein YP_004582691.1 KEGG: fri:FraEuI1c_5830 hypothetical protein YP_004582693.1 KEGG: mkm:Mkms_1441 hypothetical protein YP_004582694.1 PFAM: Prophage CP4-57 regulatory; KEGG: tcu:Tcur_3944 putative DNA-binding protein YP_004582695.1 PFAM: Integrase, catalytic core, phage; KEGG: tbi:Tbis_0078 integrase family protein YP_004582696.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: fal:FRAAL1523 putative thiol peroxidase, thioredoxin-dependent (bacterioferritin comigratory protein) YP_004582697.1 PFAM: Methyltransferase type 12; KEGG: mil:ML5_5632 methyltransferase type 11 YP_004582698.1 PFAM: DSBA oxidoreductase; KEGG: fra:Francci3_0913 DsbA oxidoreductase YP_004582699.1 PFAM: DoxX; KEGG: fre:Franean1_5633 DoxX family protein YP_004582700.1 PFAM: Copper chaperone SCO1/SenC; KEGG: fre:Franean1_5632 electron transport protein SCO1/SenC YP_004582702.1 KEGG: fal:FRAAL1529 hypothetical protein YP_004582703.1 PFAM: Ferric-uptake regulator; KEGG: fal:FRAAL3168 ferric uptake regulation protein (ferric uptake regulator) YP_004582704.1 KEGG: tbi:Tbis_0236 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive YP_004582705.1 KEGG: fre:Franean1_5628 integral membrane protein-like protein YP_004582706.1 KEGG: fri:FraEuI1c_1201 peroxiredoxin; PFAM: Glutathione peroxidase YP_004582707.1 PFAM: NUDIX hydrolase domain; KEGG: fre:Franean1_2431 NUDIX hydrolase YP_004582708.1 PFAM: Tellurite resistance TerB; NUDIX hydrolase domain; KEGG: fre:Franean1_2430 tellurite resistance TerB YP_004582709.1 KEGG: fre:Franean1_5347 hypothetical protein YP_004582710.1 KEGG: fre:Franean1_2553 hypothetical protein YP_004582711.1 PFAM: ATP-binding region, ATPase-like; KEGG: fal:FRAAL1533 hypothetical protein YP_004582713.1 KEGG: lbz:LbrM34_V2.0540 proteophosphoglycan ppg4 YP_004582714.1 KEGG: fal:FRAAL1536 hypothetical protein YP_004582715.1 PFAM: Chaperonin Cpn10; KEGG: fri:FraEuI1c_1205 chaperonin Cpn10 YP_004582716.1 KEGG: fre:Franean1_5620 hypothetical protein YP_004582717.1 KEGG: fal:FRAAL1542 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; ATPase, AAA+ type, core YP_004582720.1 KEGG: fra:Francci3_0926 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding YP_004582721.1 KEGG: fra:Francci3_0928 hypothetical protein YP_004582722.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fra:Francci3_0929 alpha/beta hydrolase YP_004582723.1 KEGG: fre:Franean1_5611 glycosyl transferase family protein; TIGRFAM: UDP-glycosyltransferase, MGT; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyl transferase, family 28 YP_004582725.1 PFAM: Thiamine biosynthesis protein ThiC; manually curated; TIGRFAM: Thiamine biosynthesis protein ThiC; KEGG: fre:Franean1_5609 thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC YP_004582726.1 KEGG: mau:Micau_0449 hypothetical protein YP_004582727.1 TIGRFAM: 6-phosphogluconate dehydrogenase related protein; KEGG: fre:Franean1_5606 6-phosphogluconate dehydrogenase-like protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal YP_004582728.1 PFAM: Fatty acid desaturase, type 2; KEGG: fri:FraEuI1c_6811 fatty acid desaturase type 2 YP_004582729.1 KEGG: fal:FRAAL2813 hypothetical protein YP_004582730.1 KEGG: fre:Franean1_5604 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004582731.1 PFAM: Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: fre:Franean1_5603 acyl-CoA dehydrogenase domain-containing protein YP_004582732.1 PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: fra:Francci3_0940 acyl-CoA dehydrogenase-like protein YP_004582733.1 KEGG: fre:Franean1_5601 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004582734.1 KEGG: fra:Francci3_0943 FAD linked oxidase-like protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal YP_004582735.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: fre:Franean1_5597 short-chain dehydrogenase/reductase SDR YP_004582736.1 KEGG: fra:Francci3_0945 hypothetical protein YP_004582737.1 PFAM: ABC transporter-like; Forkhead-associated; ABC-2 type transporter; KEGG: fra:Francci3_0947 FHA domain-containing protein; SMART: Forkhead-associated; ATPase, AAA+ type, core YP_004582738.1 KEGG: fra:Francci3_0948 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; WD40-like Beta Propeller; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004582739.1 manually curated; KEGG: fal:FRAAL1584 hypothetical protein YP_004582740.1 KEGG: fre:Franean1_6468 luciferase family protein; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_004582741.1 PFAM: Nitroreductase-like; KEGG: fra:Francci3_0949 hypothetical protein YP_004582742.1 KEGG: fra:Francci3_2258 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal YP_004582743.1 KEGG: fal:FRAAL4747 stress-inducible protein; manually curated; PFAM: UspA YP_004582744.1 PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: sro:Sros_4548 cytochrome bd ubiquinol oxidase (subunit I) YP_004582745.1 KEGG: tfu:Tfu_0637 cytochrome bd ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II YP_004582746.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: sma:SAV_4258 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004582747.1 KEGG: fal:FRAAL4748 putative two-component sensor; PFAM: GAF; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: GAF YP_004582748.1 KEGG: sgr:SGR_5768 putative ATP/GTP-binding protein YP_004582751.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_1131 GCN5-related N-acetyltransferase YP_004582752.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: azl:AZL_a01180 OsmC-family protein YP_004582753.1 PFAM: Class II aldolase/adducin, N-terminal; KEGG: npu:Npun_R0622 hypothetical protein YP_004582754.1 KEGG: fra:Francci3_2816 hypothetical protein YP_004582755.1 PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; TIGRFAM: Glycerol kinase; HAMAP: Glycerol kinase; KEGG: tcu:Tcur_1214 glycerol kinase YP_004582756.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: scb:SCAB_43731 oxidoreductase YP_004582757.1 PFAM: Excalibur calcium-binding domain; KEGG: fri:FraEuI1c_6707 hypothetical protein YP_004582759.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004582760.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004582761.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004582765.1 KEGG: ana:alr3434 hypothetical protein YP_004582766.1 PFAM: Peptidase S15/CocE/NonD, C-terminal; Alpha/beta hydrolase fold-1; KEGG: fal:FRAAL5570 putative ABC transporter ATP-binding protein YP_004582768.1 KEGG: fri:FraEuI1c_1149 hypothetical protein YP_004582769.1 KEGG: ace:Acel_0724 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004582770.1 PFAM: PilT protein, N-terminal; KEGG: fra:Francci3_0141 PilT protein-like protein YP_004582771.1 TIGRFAM: Prevent-host-death protein; KEGG: fri:FraEuI1c_2260 hypothetical protein YP_004582772.1 KEGG: fal:FRAAL3545 hypothetical protein YP_004582773.1 PFAM: Glycosyl transferase, family 2; KEGG: fal:FRAAL3546 putative succinoglycan biosynthesis protein YP_004582774.1 PFAM: Ribonuclease BN-related; KEGG: fre:Franean1_5553 ribonuclease BN YP_004582775.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fre:Franean1_5554 major facilitator transporter YP_004582776.1 KEGG: nda:Ndas_4169 hypothetical protein YP_004582778.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004582779.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004582781.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004582782.1 KEGG: fre:Franean1_2959 hypothetical protein YP_004582783.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004582788.1 PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: cai:Caci_0187 hypothetical protein YP_004582789.1 KEGG: tcu:Tcur_1266 hypothetical protein YP_004582790.1 PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: stp:Strop_0480 peptidase S8/S53 subtilisin kexin sedolisin YP_004582791.1 PFAM: Protein of unknown function DUF690; KEGG: stp:Strop_0477 hypothetical protein YP_004582792.1 manually curated; TIGRFAM: Protein of unknown function DUF571; KEGG: mau:Micau_5893 secretion protein snm4; PFAM: Protein of unknown function DUF571 YP_004582793.1 KEGG: stp:Strop_0474 cell divisionFtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; SMART: ATPase, AAA+ type, core YP_004582794.1 KEGG: sna:Snas_5487 hypothetical protein YP_004582795.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: stp:Strop_2558 deaminase-reductase domain-containing protein YP_004582796.1 PFAM: Extracellular ligand-binding receptor; KEGG: fra:Francci3_0341 extracellular ligand-binding receptor YP_004582797.1 PFAM: Bacterial inner-membrane translocator; KEGG: fra:Francci3_0342 inner-membrane translocator YP_004582798.1 PFAM: Bacterial inner-membrane translocator; KEGG: fal:FRAAL0727 high-affinity branched-chain amino acid ABC transporter membrane protein YP_004582800.1 PFAM: ABC transporter-like; KEGG: fra:Francci3_0344 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004582801.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL0729 high-affinity branched-chain amino acid ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004582802.1 KEGG: fre:Franean1_6488 large conductance mechanosensitive channel protein; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel YP_004582803.1 KEGG: pab:PAB1355 hypothetical protein YP_004582806.1 manually curated; KEGG: scb:SCAB_34071 hypothetical protein YP_004582807.1 KEGG: scb:SCAB_34061 hypothetical protein YP_004582808.1 KEGG: scb:SCAB_34051 hypothetical protein YP_004582809.1 KEGG: fre:Franean1_7176 von Willebrand factor type A YP_004582810.1 KEGG: fre:Franean1_7174 serine/threonine protein kinase YP_004582811.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004582812.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004582813.1 KEGG: mva:Mvan_4932 cytochrome c oxidase, subunit III; manually curated; PFAM: Cytochrome c oxidase, subunit III YP_004582814.1 KEGG: dar:Daro_3193 hypothetical protein YP_004582815.1 manually curated; KEGG: eba:p2A332 short-chain alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004582816.1 PFAM: Protein of unknown function DUF140; KEGG: cwo:Cwoe_1620 protein of unknown function DUF140 YP_004582817.1 PFAM: Protein of unknown function DUF140; KEGG: cwo:Cwoe_1709 protein of unknown function DUF140 YP_004582818.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004582819.1 TIGRFAM: Glycerate kinase; KEGG: tbi:Tbis_2591 glycerate kinase; PFAM: Glycerate kinase YP_004582820.1 KEGG: ahe:Arch_0244 PKD domain containing protein YP_004582821.1 TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; KEGG: fri:FraEuI1c_5795 succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: Ferredoxin YP_004582822.1 KEGG: fri:FraEuI1c_5794 succinate dehydrogenase (ubiquinone); PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal YP_004582823.1 KEGG: fri:FraEuI1c_5793 integral membrane protein YP_004582825.1 PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: tbi:Tbis_0923 malate dehydrogenase YP_004582826.1 PFAM: Heat shock protein Hsp20; KEGG: fra:Francci3_2174 heat shock protein HSP20 YP_004582827.1 KEGG: nml:Namu_4883 thiazole biosynthesis family protein; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis YP_004582828.1 KEGG: nml:Namu_4884 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS YP_004582829.1 KEGG: nml:Namu_4885 glycine oxidase ThiO; TIGRFAM: Glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase YP_004582830.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: fre:Franean1_0642 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004582831.1 PFAM: Polysaccharide deacetylase; KEGG: fal:FRAAL1746 putative secreted deacetylase YP_004582832.1 KEGG: fre:Franean1_5513 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004582833.1 KEGG: fre:Franean1_5512 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal YP_004582834.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: fra:Francci3_2999 hypothetical protein YP_004582835.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; KEGG: fra:Francci3_3000 hypothetical protein YP_004582836.1 KEGG: kra:Krad_1323 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004582837.1 HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: fra:Francci3_1040 oligoribonuclease; SMART: Exonuclease YP_004582838.1 manually curated; KEGG: fri:FraEuI1c_5110 hypothetical protein YP_004582839.1 PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: fra:Francci3_1048 pirin-like protein YP_004582840.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: fre:Franean1_0996 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted YP_004582841.1 PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: fal:FRAAL5973 leucyl/phenylalanyl-tRNA--protein transferase YP_004582842.1 manually curated; KEGG: fre:Franean1_0993 aminotransferase class I and II; PFAM: Aminotransferase, class I/II YP_004582843.1 KEGG: amu:Amuc_1922 putative ferredoxin YP_004582846.1 KEGG: fri:FraEuI1c_7020 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1 YP_004582847.1 TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: fre:Franean1_5464 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain YP_004582848.1 KEGG: fra:Francci3_0313 hypothetical protein YP_004582849.1 KEGG: fra:Francci3_0312 putative transcriptional regulator YP_004582850.1 KEGG: fri:FraEuI1c_5424 hypothetical protein YP_004582851.1 KEGG: fri:FraEuI1c_5423 protein of unknown function DUF955; PFAM: Protein of unknown function DUF955; SMART: Helix-turn-helix type 3 YP_004582852.1 PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; KEGG: fre:Franean1_6771 WD-40 repeat-containing serine/threonin protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; WD40 repeat YP_004582854.1 KEGG: fre:Franean1_5642 GCN5-related N-acetyltransferase YP_004582855.1 KEGG: fre:Franean1_1420 transposase YP_004582856.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004582858.1 KEGG: mav:MAV_1053 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase YP_004582859.1 KEGG: gob:Gobs_1282 mannitol dehydrogenase domain-containing protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal YP_004582860.1 PFAM: Nucleoside phosphorylase; KEGG: fra:Francci3_1098 purine phosphorylases family protein 1 YP_004582861.1 PFAM: NUDIX hydrolase domain; KEGG: fra:Francci3_1099 NUDIX hydrolase YP_004582862.1 KEGG: fri:FraEuI1c_1530 filamentation induced by cAMP protein Fic YP_004582863.1 KEGG: fal:FRAAL1840 single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004582864.1 KEGG: fra:Francci3_1146 hypothetical protein YP_004582865.1 TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: fre:Franean1_5318 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004582866.1 PFAM: Globin, truncated bacterial-like; KEGG: fal:FRAAL1844 hemoglobin-like protein HbO YP_004582867.1 KEGG: fre:Franean1_5316 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region YP_004582868.1 KEGG: fra:Francci3_1151 serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; GAF; ATP-binding region, ATPase-like; SMART: Protein phosphatase 2C-related; GAF YP_004582869.1 KEGG: fri:FraEuI1c_5135 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004582870.1 PFAM: Mechanosensitive ion channel MscS; KEGG: fre:Franean1_5312 MscS mechanosensitive ion channel YP_004582871.1 KEGG: fal:FRAAL1850 putative transcriptional regulatory protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004582872.1 KEGG: fre:Franean1_5310 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004582873.1 TIGRFAM: Glycoside hydrolase, family 77; KEGG: fal:FRAAL1852 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77 YP_004582874.1 KEGG: fra:Francci3_1158 hypothetical protein YP_004582875.1 KEGG: fre:Franean1_5307 hypothetical protein YP_004582876.1 PFAM: WD40-like Beta Propeller; KEGG: fre:Franean1_0494 WD40 domain-containing protein YP_004582877.1 PFAM: PilT protein, N-terminal; KEGG: xce:Xcel_3163 PilT protein domain protein YP_004582879.1 TIGRFAM: Peptidase M1, aminopeptidase N actinomycete-type; KEGG: fre:Franean1_5306 aminopeptidase N; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal YP_004582880.1 PFAM: Uncharacterised protein family UPF0118; KEGG: fra:Francci3_1161 hypothetical protein YP_004582881.1 KEGG: fal:FRAAL1861 putative signal peptide YP_004582882.1 TIGRFAM: Ribose 5-phosphate isomerase, actinobacteria; Ribose/galactose isomerase; KEGG: fre:Franean1_5303 ribose-5-phosphate isomerase B; PFAM: Ribose/galactose isomerase YP_004582883.1 KEGG: mau:Micau_4924 hypothetical protein YP_004582884.1 KEGG: fra:Francci3_1164 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2 YP_004582886.1 PFAM: Condensation domain; KEGG: fre:Franean1_0592 condensation domain-containing protein YP_004582887.1 PFAM: Glycosyl transferase, group 1; KEGG: fra:Francci3_1167 glycosyl transferase, group 1 YP_004582888.1 KEGG: fra:Francci3_1169 hypothetical protein YP_004582889.1 KEGG: fre:Franean1_5296 hypothetical protein YP_004582890.1 KEGG: fal:FRAAL1877 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004582892.1 KEGG: sro:Sros_5617 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004582893.1 KEGG: tcu:Tcur_2965 hypothetical protein YP_004582894.1 PFAM: Heat shock protein Hsp20; KEGG: fre:Franean1_5291 heat shock protein HSP20 YP_004582895.1 KEGG: fra:Francci3_1180 exodeoxyribonuclease III; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/exonuclease/phosphatase YP_004582896.1 KEGG: fre:Franean1_5289 hypothetical protein YP_004582897.1 KEGG: fri:FraEuI1c_6936 conserved hypothetical protein CHP02464; TIGRFAM: Conserved hypothetical protein CHP02464; PFAM: Conserved hypothetical protein CHP02464 YP_004582898.1 KEGG: fre:Franean1_4192 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004582899.1 TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: fre:Franean1_5275 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial YP_004582900.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: fre:Franean1_5274 endopeptidase Clp; PFAM: Peptidase S14, ClpP YP_004582901.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: fal:FRAAL1911 ATP-dependent Clp protease proteolytic subunit; PFAM: Peptidase S14, ClpP YP_004582902.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: fre:Franean1_5272 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal YP_004582903.1 TIGRFAM: Folylpolyglutamate synthetase; KEGG: fre:Franean1_5271 FolC bifunctional protein; PFAM: Mur ligase, C-terminal; Mur ligase, central YP_004582904.1 SMART: Nucleoside diphosphate kinase, core; HAMAP: Nucleoside diphosphate kinase; KEGG: fal:FRAAL1915 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core YP_004582905.1 KEGG: fre:Franean1_5269 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl YP_004582906.1 PFAM: Rod shape-determining protein MreC; KEGG: fra:Francci3_1212 rod shape-determining protein MreC YP_004582907.1 KEGG: fre:Franean1_5267 putative rod shape-determining protein MreD; putative membrane protein; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD YP_004582908.1 TIGRFAM: Penicillin-binding protein 2; KEGG: fal:FRAAL1919 putative peptidoglycan synthetase FtsI precursor (peptidoglycan glycosyltransferase 3) (penicillin-binding protein 2) (PBP-2); PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain YP_004582909.1 KEGG: fre:Franean1_5265 cell cycle protein; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein YP_004582910.1 KEGG: fra:Francci3_1216 radical SAM family protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_004582911.1 PFAM: Protein of unknown function DUF2344; KEGG: fre:Franean1_5263 hypothetical protein YP_004582912.1 KEGG: fal:FRAAL1923 ribonuclease E-like protein; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G YP_004582913.1 KEGG: fre:Franean1_5261 MFS family transporter YP_004582914.1 TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: fra:Francci3_1220 50S ribosomal protein L21; PFAM: Ribosomal protein L21 YP_004582915.1 TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: sro:Sros_7270 50S ribosomal protein L27; PFAM: Ribosomal protein L27 YP_004582916.1 TIGRFAM: GTP-binding protein Obg/CgtA; GTP-binding protein GTP1/OBG, C-terminal; HAMAP: GTPase obg; KEGG: fra:Francci3_1222 GTPase ObgE; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTP-binding protein GTP1/OBG, C-terminal YP_004582917.1 KEGG: fre:Franean1_5257 gamma-glutamyl kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase, ProB-related; HAMAP: Glutamate 5-kinase; SMART: Pseudouridine synthase/archaeosine transglycosylase YP_004582918.1 KEGG: fra:Francci3_1225 putative exonuclease YP_004582919.1 KEGG: fal:FRAAL1930 putative exonuclease; TIGRFAM: Exonuclease SbcD; PFAM: Metallophosphoesterase YP_004582920.1 PFAM: Aldehyde dehydrogenase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: fra:Francci3_1227 gamma-glutamyl phosphate reductase YP_004582922.1 KEGG: fre:Franean1_7194 hypothetical protein YP_004582923.1 KEGG: fal:FRAAL4958 putative glycosyl transferase (partial match); manually curated; PFAM: Glycosyl transferase, family 2 YP_004582924.1 KEGG: fre:Franean1_7196 hypothetical protein; PFAM: Domain of unknown function DUF1929; Kelch repeat type 2 YP_004582925.1 KEGG: fre:Franean1_7197 cellulase; PFAM: 1, 4-beta cellobiohydrolase YP_004582927.1 KEGG: fal:FRAAL4955 endoglucanase A precursor (endo-1,4-beta-glucanase) (cellulase); PFAM: 1, 4-beta cellobiohydrolase YP_004582928.1 PFAM: Copper chaperone SCO1/SenC; KEGG: fra:Francci3_2499 electron transport protein SCO1/SenC YP_004582929.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: fri:FraEuI1c_6100 6-phosphogluconate dehydrogenase NAD-binding protein YP_004582930.1 KEGG: fal:FRAAL1932 hypothetical protein; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core YP_004582931.1 PFAM: vWA containing CoxE-like; KEGG: fal:FRAAL1933 hypothetical protein YP_004582932.1 KEGG: fre:Franean1_5253 hypothetical protein YP_004582933.1 TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; KEGG: fal:FRAAL1935 phosphoglucomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal YP_004582934.1 PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: fri:FraEuI1c_1983 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_004582935.1 KEGG: fri:FraEuI1c_1984 iojap-like protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein YP_004582936.1 PFAM: Phosphoglycerate mutase; KEGG: fre:Franean1_5245 phosphoglycerate mutase YP_004582939.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004582940.1 PFAM: MaoC-like dehydratase; KEGG: mag:amb1218 acyl dehydratase YP_004582941.1 KEGG: aav:Aave_2096 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004582944.1 KEGG: gbr:Gbro_4189 hypothetical protein YP_004582945.1 PFAM: Protein of unknown function DUF347; KEGG: fra:Francci3_4177 hypothetical protein YP_004582947.1 PFAM: Polysaccharide deacetylase; KEGG: fra:Francci3_0164 twin-arginine translocation pathway signal YP_004582948.1 TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: fal:FRAAL3231 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA YP_004582949.1 KEGG: fri:FraEuI1c_3975 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004582950.1 KEGG: fri:FraEuI1c_3974 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004582951.1 PFAM: Protein of unknown function DUF347; KEGG: sma:SAV_130 integral membrane protein YP_004582952.1 KEGG: fra:Francci3_2206 hypothetical protein YP_004582953.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sma:SAV_5333 TetR family transcriptional regulator YP_004582954.1 KEGG: ddr:Deide_3p00660 putative short chain dehydrogenase; manually curated; PFAM: Short-chain dehydrogenase/reductase SDR YP_004582955.1 KEGG: ske:Sked_14600 aryl-alcohol dehydrogenase like protein; PFAM: Aldo/keto reductase YP_004582956.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rop:ROP_40680 putative LysR family transcriptional regulator YP_004582957.1 KEGG: sro:Sros_7231 hypothetical protein YP_004582958.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fal:FRAAL3995 putative hydrolase YP_004582959.1 KEGG: sro:Sros_9024 transcriptional regulators-like protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004582960.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fri:FraEuI1c_3057 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004582961.1 PFAM: Luciferase-like, subgroup; KEGG: sro:Sros_9025 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein YP_004582962.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: fre:Franean1_1502 carboxymuconolactone decarboxylase YP_004582963.1 KEGG: fri:FraEuI1c_3380 hypothetical protein YP_004582964.1 PFAM: ABC transporter-like; KEGG: fri:FraEuI1c_3381 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004582965.1 PFAM: Bacterial inner-membrane translocator; KEGG: fri:FraEuI1c_3382 inner-membrane translocator YP_004582966.1 KEGG: rop:ROP_53530 hypothetical protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004582967.1 KEGG: tcu:Tcur_2557 hypothetical protein YP_004582968.1 manually curated; KEGG: fal:FRAAL3808 hypothetical protein YP_004582969.1 KEGG: npu:Npun_F0140 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004582970.1 KEGG: fra:Francci3_1247 hypothetical protein YP_004582971.1 PFAM: XdhC- CoxI; KEGG: tbi:Tbis_1385 hypothetical protein YP_004582972.1 KEGG: sma:SAV_1063 hypothetical protein YP_004582973.1 PFAM: DNA helicase, UvrD/REP type; KEGG: fre:Franean1_5583 putative helicase YP_004582974.1 KEGG: fre:Franean1_2202 protein tyrosine/serine phosphatase YP_004582975.1 PFAM: Methyltransferase type 11; KEGG: fal:FRAAL0999 putative antibiotic resistance protein YP_004582976.1 KEGG: rxy:Rxyl_1818 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase YP_004582977.1 KEGG: fra:Francci3_2979 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004582978.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004582979.1 KEGG: fre:Franean1_2197 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004582980.1 KEGG: fal:FRAAL1991 putative integral membrane protein YP_004582981.1 PFAM: Protein of unknown function DUF159; KEGG: fra:Francci3_1254 hypothetical protein YP_004582982.1 KEGG: fre:Franean1_0671 putative alkylated DNA repair protein YP_004582983.1 KEGG: fra:Francci3_1255 hypothetical protein YP_004582984.1 PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: fre:Franean1_2101 YceI family protein YP_004582985.1 KEGG: nca:Noca_2169 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004582986.1 PFAM: Soluble ligand binding domain; Helix-hairpin-helix motif; KEGG: fre:Franean1_2102 helix-hairpin-helix DNA-binding motif-containing protein YP_004582987.1 KEGG: fra:Francci3_1258 ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_004582988.1 KEGG: fre:Franean1_2104 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta YP_004582989.1 KEGG: fra:Francci3_1260 hypothetical protein YP_004582990.1 TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: fal:FRAAL2001 30S ribosomal protein S20; PFAM: Ribosomal protein S20 YP_004582991.1 TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: fre:Franean1_2106 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal YP_004582993.1 TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: fra:Francci3_1263 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004582994.1 TIGRFAM: Negative regulator of class I heat shock protein; HAMAP: Negative regulator of class I heat shock protein; KEGG: fre:Franean1_2109 heat-inducible transcription repressor; PFAM: Negative regulator of class I heat shock protein YP_004582995.1 SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: fre:Franean1_2110 chaperone protein DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region YP_004582996.1 manually curated; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; KEGG: fri:FraEuI1c_2200 protein of unknown function DUF558; PFAM: Ribosomal RNA small subunit methyltransferase E YP_004582997.1 PFAM: PhoH-like protein; KEGG: fra:Francci3_1267 PhoH-like protein YP_004582998.1 TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: fre:Franean1_2113 putative metalloprotease; PFAM: Uncharacterised protein family UPF0054 YP_004582999.1 KEGG: fre:Franean1_2114 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; Protein of unknown function DUF21; Transporter-associated region; SMART: Cystathionine beta-synthase, core YP_004583000.1 KEGG: fre:Franean1_2115 putative cytidine deaminase (cytidine aminohydrolase) (CDA) YP_004583001.1 TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: fre:Franean1_2116 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2 YP_004583002.1 KEGG: mno:Mnod_4142 methylmalonyl-CoA epimerase; manually curated; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004583003.1 KEGG: sro:Sros_2975 WD40 repeatdomain-containing protein-like protein; PFAM: Pentapeptide repeat; WD40 repeat, subgroup; SMART: Toll-Interleukin receptor; ATPase, AAA+ type, core; WD40 repeat YP_004583004.1 KEGG: mjl:Mjls_1829 beta-lactamase domain-containing protein YP_004583005.1 PFAM: NUDIX hydrolase domain; KEGG: fal:FRAAL2015 hypothetical protein YP_004583006.1 TIGRFAM: Recombination protein O, RecO; HAMAP: DNA repair protein recO; KEGG: fre:Franean1_2118 DNA repair protein RecO; PFAM: Recombination protein O, RecO YP_004583007.1 KEGG: fra:Francci3_1273 undecaprenyl pyrophosphate synthetase; manually curated; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase YP_004583008.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: fre:Franean1_2120 antibiotic biosynthesis monooxygenase YP_004583009.1 KEGG: fri:FraEuI1c_2213 glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding YP_004583010.1 KEGG: fra:Francci3_2917 hypothetical protein YP_004583011.1 KEGG: fri:FraEuI1c_2215 von Willebrand factor type A YP_004583012.1 PFAM: Toxic anion resistance; KEGG: fra:Francci3_2919 toxic anion resistance YP_004583013.1 KEGG: fra:Francci3_2920 hypothetical protein YP_004583014.1 TIGRFAM: Pyruvate, phosphate dikinase; KEGG: ace:Acel_0801 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme YP_004583015.1 PFAM: Protein of unknown function DUF218; KEGG: fre:Franean1_2122 hypothetical protein YP_004583016.1 KEGG: fra:Francci3_1278 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal YP_004583017.1 PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: fal:FRAAL2022 hypothetical protein YP_004583018.1 KEGG: fra:Francci3_1280 hypothetical protein YP_004583019.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: fre:Franean1_2127 deoxyguanosinetriphosphate triphosphohydrolase-like protein; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain YP_004583020.1 KEGG: fra:Francci3_1282 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain; DNA primase DnaG, DnaB-binding YP_004583021.1 KEGG: fre:Franean1_2129 RpoD family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 4 YP_004583022.1 KEGG: fal:FRAAL2033 putative sortase (surface protein transpeptidase); TIGRFAM: Peptidase C60, sortase A/B; PFAM: Peptidase C60, sortase A/B YP_004583023.1 KEGG: gob:Gobs_0838 hypothetical protein YP_004583024.1 KEGG: fal:FRAAL1478 hypothetical protein YP_004583025.1 KEGG: fra:Francci3_0205 hypothetical protein YP_004583026.1 PFAM: Transposase, Rhodopirellula-type; KEGG: rop:ROP_pROB01-00660 putative transposase YP_004583027.1 KEGG: fre:Franean1_3064 hypothetical protein YP_004583028.1 KEGG: fra:Francci3_1105 hypothetical protein YP_004583029.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004583030.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004583031.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: kse:Ksed_07240 daunorubicin resistance ABC transporter ATP-binding subunit; PFAM: ABC transporter-like YP_004583032.1 PFAM: ABC-2 type transporter; KEGG: kfl:Kfla_5617 ABC-2 type transporter YP_004583033.1 KEGG: fre:Franean1_1420 transposase YP_004583034.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004583035.1 manually curated; KEGG: fre:Franean1_3423 putative transposase YP_004583036.1 PFAM: Transposase, Rhodopirellula-type; KEGG: sma:SAV_309 transposase YP_004583037.1 PFAM: Transposase IS3/IS911; KEGG: srt:Srot_2378 transposase IS3/IS911 family protein YP_004583038.1 KEGG: cai:Caci_4007 RNA-directed DNA polymerase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific YP_004583039.1 PFAM: Integrase, catalytic core; KEGG: rme:Rmet_6067 transposase catalytic site ISRme15 YP_004583040.1 KEGG: fre:Franean1_4607 RNA-directed DNA polymerase; manually curated; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Intron maturase, type II YP_004583041.1 PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: dae:Dtox_4019 RNA-directed DNA polymerase (reverse transcriptase) YP_004583042.1 PFAM: Methyltransferase type 11; KEGG: dae:Dtox_2840 methyltransferase type 11 YP_004583043.1 KEGG: azl:AZL_c02650 hypothetical protein YP_004583044.1 PFAM: Integrase, catalytic core; KEGG: gob:Gobs_2631 integrase catalytic domain-containing protein YP_004583045.1 PFAM: Glycosyl transferase, family 2; KEGG: fra:Francci3_1301 glycosyl transferase family protein YP_004583046.1 KEGG: fra:Francci3_1302 hypothetical protein YP_004583047.1 KEGG: fre:Franean1_2156 coenzyme F390 synthetase-like protein YP_004583048.1 PFAM: Protein of unknown function DUF362; KEGG: fre:Franean1_2157 hypothetical protein YP_004583049.1 PFAM: Methyltransferase type 12; KEGG: nml:Namu_0742 type 12 methyltransferase YP_004583050.1 PFAM: Methyltransferase type 12; KEGG: mem:Memar_0201 methyltransferase type 12 YP_004583051.1 TIGRFAM: Methyltransferase FkbM; KEGG: fra:Francci3_1299 methyltransferase FkbM YP_004583052.1 TIGRFAM: Methyltransferase FkbM; KEGG: fal:FRAAL2051 hypothetical protein YP_004583053.1 PFAM: Glycosyl transferase, group 1; KEGG: fri:FraEuI1c_2234 glycosyl transferase group 1 YP_004583054.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583055.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583056.1 PFAM: Oxidoreductase, N-terminal; Alcohol dehydrogenase, zinc-binding; KEGG: fra:Francci3_1306 oxidoreductase-like protein YP_004583057.1 PFAM: Heparinase II/III-like; KEGG: fra:Francci3_1300 heparinase II/III-like protein YP_004583058.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fra:Francci3_1303 methyltransferase FkbM YP_004583059.1 PFAM: Glycosyl transferase, group 1; KEGG: fre:Franean1_2160 glycosyl transferase group 1 YP_004583060.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: fra:Francci3_1308 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004583061.1 KEGG: fre:Franean1_2141 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004583062.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: fre:Franean1_2161 glycosyl transferase family protein YP_004583063.1 TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: fra:Francci3_1309 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal YP_004583064.1 KEGG: fri:FraEuI1c_0374 hypothetical protein YP_004583065.1 KEGG: ani:AN2833.2 hypothetical protein YP_004583066.1 PFAM: Glycosyl transferase, group 1; KEGG: fre:Franean1_2166 glycosyl transferase group 1 YP_004583067.1 PFAM: NUDIX hydrolase domain; KEGG: stp:Strop_1992 NUDIX hydrolase YP_004583068.1 TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: fre:Franean1_2063 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004583069.1 HAMAP: Phosphoglycerate kinase; KEGG: fra:Francci3_1638 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase YP_004583070.1 TIGRFAM: Triosephosphate isomerase; KEGG: fal:FRAAL4586 triosephosphate isomerase; PFAM: Triosephosphate isomerase YP_004583071.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fal:FRAAL2821 dipeptide-binding lipoprotein YP_004583072.1 KEGG: fre:Franean1_2066 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004583073.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fal:FRAAL4583 putative ABC-type transport system, membrane component YP_004583074.1 KEGG: fra:Francci3_1642 hypothetical protein YP_004583075.1 KEGG: fal:FRAAL4578 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase YP_004583076.1 PFAM: Glucose-6-phosphate dehydrogenase subunit; KEGG: fal:FRAAL4577 putative OxPP cycle protein OpcA YP_004583077.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: fre:Franean1_2073 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase YP_004583078.1 TIGRFAM: Transaldolase subfamily; HAMAP: Transaldolase; KEGG: fra:Francci3_1648 transaldolase; PFAM: Transaldolase YP_004583079.1 TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: fri:FraEuI1c_4863 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_004583080.1 PFAM: Cytochrome oxidase assembly; KEGG: fre:Franean1_2078 cytochrome oxidase assembly YP_004583081.1 PFAM: ABC-2 type transporter; KEGG: fre:Franean1_2079 ABC-2 type transporter YP_004583082.1 PFAM: ABC transporter-like; KEGG: fra:Francci3_1655 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004583083.1 KEGG: fra:Francci3_1656 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004583084.1 PFAM: HTH transcriptional regulator, ArsR; KEGG: fal:FRAAL4564 putative DNA-binding protein YP_004583085.1 KEGG: fra:Francci3_1660 FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD YP_004583086.1 KEGG: fre:Franean1_2086 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD YP_004583087.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: fre:Franean1_2087 Rieske (2Fe-2S) domain-containing protein YP_004583088.1 TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: fre:Franean1_2088 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core YP_004583089.1 TIGRFAM: Cysteine desulfurase, SufS; KEGG: fre:Franean1_2089 SufS subfamily cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004583090.1 KEGG: fre:Franean1_2090 NifU family SUF system FeS assembly protein; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal YP_004583091.1 PFAM: Protein of unknown function DUF59; KEGG: fal:FRAAL4557 hypothetical protein YP_004583092.1 PFAM: Protein of unknown function DUF820; KEGG: kfl:Kfla_1782 protein of unknown function DUF820 YP_004583093.1 KEGG: tcu:Tcur_2021 alcohol dehydrogenase zinc-binding domain-containing protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004583094.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583095.1 PFAM: Excalibur calcium-binding domain; KEGG: fri:FraEuI1c_7118 hypothetical protein YP_004583097.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004583098.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004583099.1 KEGG: fre:Franean1_0166 hypothetical protein YP_004583100.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: fal:FRAAL4549 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004583101.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: fra:Francci3_2420 LysR family transcriptional regulator YP_004583102.1 KEGG: fal:FRAAL3869 hypothetical protein YP_004583103.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: fal:FRAAL3867 putative acyl-CoA dehydrogenase YP_004583104.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fal:FRAAL3866 putative ABC transporter, membrane binding protein YP_004583105.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL3865 putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component YP_004583106.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL3864 putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component YP_004583107.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL3863 putative ABC transport protein, ATPase component; SMART: ATPase, AAA+ type, core YP_004583108.1 PFAM: Rhodanese-like; KEGG: fal:FRAAL3862 thiosulfate sulfurtransferase (partial match); SMART: Rhodanese-like YP_004583109.1 PFAM: Protein of unknown function DUF820; KEGG: sro:Sros_2526 hypothetical protein YP_004583110.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583111.1 KEGG: fre:Franean1_2100 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; Bacterial transglutaminase-like, N-terminal; SMART: Transglutaminase-like YP_004583113.1 PFAM: Protein of unknown function DUF403, bacteria; KEGG: fre:Franean1_2099 hypothetical protein YP_004583114.1 PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; KEGG: fal:FRAAL4547 hypothetical protein YP_004583115.1 KEGG: fra:Francci3_1670 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004583116.1 KEGG: fre:Franean1_2205 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein YP_004583118.1 KEGG: fal:FRAAL4542 hypothetical protein YP_004583119.1 KEGG: fri:FraEuI1c_4837 putative transcriptional regulator YP_004583120.1 PFAM: Crotonase, core; KEGG: fri:FraEuI1c_4836 enoyl-CoA hydratase/isomerase YP_004583121.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: fra:Francci3_1676 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004583122.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583123.1 PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; manually curated; KEGG: fal:FRAAL4537 pyruvate kinase; TIGRFAM: Pyruvate kinase YP_004583124.1 KEGG: dre:100006405 hypothetical LOC100006405 YP_004583125.1 KEGG: fre:Franean1_2214 hypothetical protein YP_004583127.1 KEGG: fre:Franean1_2215 hypothetical protein YP_004583128.1 PFAM: FAD dependent oxidoreductase; KEGG: fre:Franean1_2220 hydroxyglutarate oxidase YP_004583129.1 PFAM: Glycoside hydrolase 15-related; KEGG: fre:Franean1_2221 glycoside hydrolase 15-related YP_004583130.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583131.1 KEGG: fra:Francci3_1890 hypothetical protein YP_004583132.1 PFAM: Protein of unknown function, PGPGW, transmembrane; KEGG: fal:FRAAL4525 hypothetical protein YP_004583133.1 PFAM: Regulator of K+ conductance, C-terminal; KEGG: fri:FraEuI1c_3488 TrkA-C domain protein YP_004583134.1 PFAM: Cation/H+ exchanger; KEGG: fre:Franean1_2225 sodium/hydrogen exchanger YP_004583135.1 TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: fal:FRAAL4309 putative sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA YP_004583136.1 KEGG: fal:FRAAL4522 enoyl-(acyl carrier protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583137.1 KEGG: fri:FraEuI1c_3270 protein of unknown function DUF167; HAMAP: Protein of unknown function DUF167; PFAM: Protein of unknown function DUF167 YP_004583138.1 KEGG: fal:FRAAL4518 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583139.1 TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: fre:Franean1_2232 ferrochelatase; PFAM: Ferrochelatase YP_004583140.1 KEGG: fre:Franean1_2233 hypothetical protein YP_004583142.1 KEGG: fal:FRAAL4514 hypothetical protein YP_004583143.1 PFAM: Lipase, GDSL; KEGG: fre:Franean1_2237 GDSL family lipase YP_004583144.1 PFAM: Glycosyl transferase, group 1; KEGG: fal:FRAAL4512 putative glycosyl transferase YP_004583145.1 PFAM: Glycosyl transferase, group 1; KEGG: fra:Francci3_1907 glycosyl transferase, group 1 YP_004583146.1 KEGG: fri:FraEuI1c_5630 FAD linked oxidase domain protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal YP_004583147.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: fri:FraEuI1c_2442 ATP-dependent metalloprotease FtsH; PFAM: ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; Peptidase M41 YP_004583148.1 KEGG: fra:Francci3_1908 hypothetical protein YP_004583149.1 PFAM: Protein of unknown function DUF62; KEGG: fri:FraEuI1c_4802 protein of unknown function DUF62 YP_004583150.1 TIGRFAM: Uricase; KEGG: fri:FraEuI1c_4801 urate oxidase; PFAM: Uricase YP_004583151.1 PFAM: YkuD domain; KEGG: fra:Francci3_1911 ErfK/YbiS/YcfS/YnhG YP_004583152.1 KEGG: fra:Francci3_1034 ABC transporter-like protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core YP_004583153.1 KEGG: fre:Franean1_2520 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_004583154.1 KEGG: fre:Franean1_5067 beta-lactamase domain-containing protein YP_004583155.1 TIGRFAM: Formaldehyde dehydrogenase, mycothiol-dependent; KEGG: fre:Franean1_5066 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004583156.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: fra:Francci3_1450 cobyrinic acid a,c-diamide synthase YP_004583157.1 PFAM: Peptidase M50; KEGG: fra:Francci3_1451 hypothetical protein YP_004583158.1 PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: fal:FRAAL2249 putative segregation and condensation protein A YP_004583159.1 KEGG: fri:FraEuI1c_2929 chromosome segregation and condensation protein, ScpB; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote YP_004583160.1 TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: fal:FRAAL2251 pseudouridylate synthase; SMART: RNA-binding S4 YP_004583161.1 PFAM: Prephenate dehydrogenase; Amino acid-binding ACT; KEGG: fri:FraEuI1c_2931 prephenate dehydrogenase YP_004583162.1 TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: fal:FRAAL2253 cytidylate kinase (CK) (cytidine monophosphate kinase) (CMP kinase); PFAM: Cytidylate kinase region; Shikimate kinase YP_004583163.1 KEGG: fre:Franean1_5058 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004583164.1 SMART: ATPase, AAA+ type, core; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; KEGG: fre:Franean1_5057 GTP-binding protein EngA; HAMAP: GTP-binding, EngA; PFAM: GTP-binding protein, HSR1-related YP_004583167.1 KEGG: scb:SCAB_7111 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; GAF; ATP-binding region, ATPase-like; SMART: Protein phosphatase 2C-related YP_004583168.1 KEGG: cbr:CBG24057 C. briggsae CBR-GRSP-2 protein YP_004583169.1 PFAM: Peptidase C60, sortase A/B; KEGG: fra:Francci3_1460 peptidase C60, sortase A and B YP_004583170.1 KEGG: msm:MSMEG_2917 hypothetical protein YP_004583171.1 HAMAP: Valyl-tRNA synthetase; KEGG: fal:FRAAL2075 valyl-tRNA synthetase YP_004583172.1 KEGG: fra:Francci3_1313 inositol-1(or 4)-monophosphatase; PFAM: Inositol monophosphatase YP_004583173.1 PFAM: Bacterial transferase hexapeptide repeat; KEGG: fra:Francci3_1316 hypothetical protein YP_004583174.1 KEGG: fre:Franean1_5197 hypothetical protein YP_004583175.1 KEGG: gbr:Gbro_2250 hypothetical protein YP_004583176.1 PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: fre:Franean1_5196 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_004583177.1 KEGG: fri:FraEuI1c_2265 protein of unknown function DUF3710 YP_004583178.1 KEGG: fre:Franean1_5193 hypothetical protein YP_004583179.1 PFAM: Deoxyribonuclease/rho motif-related TRAM; KEGG: fre:Franean1_5189 deoxyribonuclease YP_004583180.1 PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: fra:Francci3_1326 1-deoxy-D-xylulose-5-phosphate synthase YP_004583181.1 KEGG: fal:FRAAL2089 hypothetical protein YP_004583182.1 PFAM: Polyketide cyclase/dehydrase; KEGG: sen:SACE_5310 dimethyladenosine transferase (rRNA methylation) YP_004583183.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: fal:FRAAL2301 hypothetical protein YP_004583184.1 KEGG: mgi:Mflv_0929 CopG/DNA-binding domain-containing protein YP_004583185.1 KEGG: fra:Francci3_1329 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_004583186.1 KEGG: fre:Franean1_3017 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase YP_004583187.1 KEGG: fra:Francci3_1331 3'-5' exonuclease; PFAM: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; SMART: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain YP_004583188.1 KEGG: fre:Franean1_5177 hypothetical protein YP_004583189.1 KEGG: fri:FraEuI1c_2289 hypothetical protein YP_004583190.1 KEGG: fre:Franean1_5176 hypothetical protein YP_004583191.1 KEGG: fra:Francci3_1334 uroporphyrinogen decarboxylase; manually curated; TIGRFAM: Uroporphyrinogen decarboxylase HemE; PFAM: Uroporphyrinogen decarboxylase (URO-D); HAMAP: Uroporphyrinogen decarboxylase HemE YP_004583192.1 TIGRFAM: Protoporphyrinogen oxidase; KEGG: fri:FraEuI1c_2291 protoporphyrinogen oxidase; PFAM: Amine oxidase YP_004583193.1 PFAM: Chlorite dismutase; KEGG: fri:FraEuI1c_2292 chlorite dismutase YP_004583194.1 PFAM: Methyltransferase type 11; KEGG: mil:ML5_5015 methyltransferase type 11 YP_004583196.1 PFAM: Divalent ion symporter; KEGG: ace:Acel_0903 arsenical pump membrane protein YP_004583197.1 PFAM: WD40 repeat, subgroup; Pentapeptide repeat; KEGG: sro:Sros_2975 WD40 repeatdomain-containing protein-like protein YP_004583198.1 SMART: Toll-Interleukin receptor; KEGG: sro:Sros_2975 WD40 repeatdomain-containing protein-like protein YP_004583199.1 KEGG: fal:FRAAL3954 hypothetical protein; PFAM: WD40 repeat, subgroup; Pentapeptide repeat; SEFIR; SMART: ATPase, AAA+ type, core; Toll-Interleukin receptor; WD40 repeat YP_004583200.1 PFAM: Aminoglycoside phosphotransferase; KEGG: fre:Franean1_4966 hypothetical protein YP_004583201.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004583202.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004583203.1 KEGG: fal:FRAAL5813 hypothetical protein YP_004583204.1 KEGG: fre:Franean1_0052 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583205.1 TIGRFAM: Adenylylsulphate kinase, C-terminal; KEGG: fal:FRAAL2106 adenosine 5'-phosphosulfate kinase (partial match); PFAM: Adenylylsulphate kinase, C-terminal; Sulphate adenylyltransferase YP_004583206.1 PFAM: Inositol monophosphatase; KEGG: fal:FRAAL2107 3'-phosphoadenosine-5'-phosphosulfate (PapS) 3'-phosphatase YP_004583207.1 TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: fal:FRAAL2108 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase YP_004583208.1 TIGRFAM: Sulphate adenylyltransferase, large subunit; KEGG: fal:FRAAL2109 ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase); PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2 YP_004583209.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: fal:FRAAL2113 hypothetical protein YP_004583210.1 PFAM: ATPase, AFG1-like; KEGG: fal:FRAAL2114 putative ATP/GTP-binding integral membrane protein YP_004583212.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: fal:FRAAL2116 malto-oligosyltrehalose trehalohydrolase; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal YP_004583213.1 PFAM: Phosphoglycerate mutase; KEGG: sro:Sros_9413 hypothetical protein YP_004583215.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: azl:AZL_a01240 sulfonate/nitrate/taurine transport system permease protein YP_004583216.1 KEGG: tcu:Tcur_1386 NMT1/THI5 like domain-containing protein YP_004583217.1 PFAM: ABC transporter-like; KEGG: swi:Swit_2510 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004583218.1 PFAM: Aldo/keto reductase; KEGG: kfl:Kfla_4142 aldo/keto reductase YP_004583219.1 KEGG: rha:RHA1_ro02971 hypothetical protein YP_004583220.1 TIGRFAM: Diaminopimelate decarboxylase; KEGG: fre:Franean1_0609 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004583221.1 PFAM: ATP-grasp fold, DUF201-type; KEGG: cwo:Cwoe_1007 hypothetical protein YP_004583222.1 PFAM: Major facilitator superfamily MFS-1; KEGG: gob:Gobs_0452 major facilitator superfamily protein YP_004583223.1 PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; KEGG: ter:Tery_4389 radical SAM family protein YP_004583224.1 PFAM: Cobalamin (vitamin B12)-binding; Radical SAM; KEGG: rpc:RPC_4478 radical SAM family protein YP_004583225.1 TIGRFAM: Thioester reductase; KEGG: kfl:Kfla_4122 amino acid adenylation domain protein; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Male sterility, NAD-binding YP_004583226.1 PFAM: Carbonic anhydrase; KEGG: syf:Synpcc7942_B2619 carbonic anhydrase, putative YP_004583227.1 PFAM: Methane/phenol/toluene hydroxylase; KEGG: fra:Francci3_0211 methane/phenol/toluene hydroxylase YP_004583228.1 KEGG: fra:Francci3_0210 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004583229.1 KEGG: rop:ROP_30490 hypothetical protein YP_004583230.1 KEGG: fra:Francci3_2498 twin-arginine translocation pathway signal YP_004583232.1 PFAM: NUDIX hydrolase domain; KEGG: fal:FRAAL6553 hypothetical protein YP_004583233.1 KEGG: fra:Francci3_4145 transposase IS66 YP_004583234.1 PFAM: ABC transporter-like; KEGG: fra:Francci3_4240 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004583235.1 PFAM: Periplasmic binding protein; KEGG: fra:Francci3_4239 periplasmic binding protein YP_004583236.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fra:Francci3_4238 major facilitator transporter YP_004583238.1 manually curated; KEGG: fra:Francci3_4236 hypothetical protein YP_004583239.1 TIGRFAM: CocE/NonD hydrolase; KEGG: fra:Francci3_4235 peptidase S15 YP_004583240.1 KEGG: fra:Francci3_4234 hypothetical protein; TIGRFAM: biosynthesis docking scaffold protein, SagD family; PFAM: YcaO-like YP_004583241.1 KEGG: fra:Francci3_4233 hypothetical protein; TIGRFAM: biosynthesis docking scaffold protein, SagD family; PFAM: YcaO-like YP_004583242.1 PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: fri:FraEuI1c_3474 acyl-CoA dehydrogenase type 2 domain protein YP_004583243.1 KEGG: fra:Francci3_4232 nitroreductase; TIGRFAM: SagB-type dehydrogenase domain; PFAM: Nitroreductase-like YP_004583244.1 KEGG: fre:Franean1_7191 hypothetical protein YP_004583245.1 PFAM: YibE/F-like; KEGG: fre:Franean1_4407 YibE/F family protein YP_004583246.1 PFAM: Aldehyde dehydrogenase; KEGG: mjl:Mjls_0080 aldehyde dehydrogenase YP_004583247.1 KEGG: bai:BAA_1299 male specific sperm protein YP_004583249.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: fre:Franean1_3786 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004583250.1 PFAM: Homogentisate 1,2-dioxygenase; KEGG: sen:SACE_3944 homogentisate 1,2-dioxygenase YP_004583251.1 TIGRFAM: Fumarylacetoacetase; KEGG: nda:Ndas_1870 fumarylacetoacetase; PFAM: Fumarylacetoacetase, C-terminal-like; Fumarylacetoacetase, N-terminal YP_004583252.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004583253.1 KEGG: mbt:JTY_3478 hypothetical protein YP_004583255.1 KEGG: nfa:nfa20990 putative cation transporter; PFAM: Cation transporter YP_004583256.1 PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: tcu:Tcur_1711 TrkA-N domain-containing protein YP_004583257.1 PFAM: Plasmid stabilisation system; KEGG: aau:AAur_0707 addiction module toxin, RelE/StbE YP_004583258.1 TIGRFAM: Prevent-host-death protein YP_004583259.1 KEGG: mab:MAB_0590c hypothetical protein YP_004583260.1 PFAM: Ribose/galactose isomerase; KEGG: fri:FraEuI1c_5803 ribose/galactose isomerase YP_004583261.1 TIGRFAM: Prevent-host-death protein YP_004583262.1 PFAM: Clp, N-terminal; KEGG: fre:Franean1_4091 Clp domain-containing protein YP_004583263.1 KEGG: fra:Francci3_2205 hypothetical protein YP_004583264.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rha:RHA1_ro01530 TetR family transcriptional regulator YP_004583265.1 PFAM: Uncharacterised conserved protein UCP07580; KEGG: sma:SAV_155 hypothetical protein YP_004583266.1 KEGG: sma:SAV_156 iron-sulfur oxidoreductase; PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region YP_004583267.1 KEGG: sen:SACE_3553 hypothetical protein YP_004583268.1 KEGG: cai:Caci_8731 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Alpha/beta hydrolase fold-1 YP_004583269.1 PFAM: Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; KEGG: rha:RHA1_ro01409 oxidoreductase YP_004583270.1 PFAM: Fatty acid desaturase, type 1; KEGG: nfa:nfa12950 putative fatty acid desaturase YP_004583271.1 KEGG: bbt:BBta_5008 hypothetical protein YP_004583272.1 KEGG: fre:Franean1_3295 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583273.1 KEGG: fal:FRAAL2622 high-affinity branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004583274.1 PFAM: ABC transporter-like; Bacterial inner-membrane translocator; KEGG: fre:Franean1_2952 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004583275.1 KEGG: fal:FRAAL2624 hypothetical protein YP_004583276.1 TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; KEGG: fra:Francci3_2203 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type YP_004583277.1 KEGG: tbi:Tbis_1602 ABC transporter-like protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core YP_004583278.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fre:Franean1_3477 binding-protein-dependent transport systems inner membrane component YP_004583279.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fra:Francci3_2766 binding-protein-dependent transport systems inner membrane component YP_004583280.1 KEGG: fal:FRAAL0233 flavin dependant oxidoreductase; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_004583281.1 TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: fal:FRAAL0234 nitrilotriacetate monooxygenase YP_004583282.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fre:Franean1_3479 extracellular solute-binding protein YP_004583283.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL4097 TetR family transcriptional regulator YP_004583284.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583285.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fal:FRAAL4094 putative transmembrane efflux protein YP_004583286.1 KEGG: fre:Franean1_3458 alpha/beta hydrolase domain-containing protein YP_004583287.1 PFAM: Cytochrome P450; KEGG: sro:Sros_9048 hypothetical protein YP_004583288.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004583289.1 PFAM: Ferredoxin soy-like; KEGG: ami:Amir_2892 protein of unknown function DUF1271 YP_004583291.1 PFAM: Thioesterase; KEGG: fal:FRAAL3859 thioesterase involved in non-ribosomal peptide biosynthesis YP_004583292.1 KEGG: saq:Sare_3156 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; Short-chain dehydrogenase/reductase SDR YP_004583293.1 KEGG: fre:Franean1_3483 hypothetical protein YP_004583294.1 PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; KEGG: fre:Franean1_3484 dehydrogenase catalytic domain-containing protein YP_004583295.1 KEGG: fal:FRAAL4077 3-oxoacyl-[acyl-carrier-protein] synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YP_004583296.1 PFAM: Monooxygenase, FAD-binding; KEGG: tfu:Tfu_1216 hypothetical protein YP_004583297.1 PFAM: Luciferase-like, subgroup; KEGG: fre:Franean1_3467 luciferase family protein YP_004583298.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004583299.1 PFAM: Ferredoxin soy-like; KEGG: cai:Caci_1903 protein of unknown function DUF1271 YP_004583300.1 KEGG: fal:FRAAL0335 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal YP_004583301.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL0235 TetR family transcriptional regulator YP_004583304.1 PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; KEGG: sen:SACE_4110 SARP family pathway specific transcriptional activator YP_004583306.1 KEGG: mau:Micau_3650 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C YP_004583307.1 KEGG: fal:FRAAL3857 putative acetyl/propionyl CoA carboxylase beta subunit; PFAM: Carboxyl transferase YP_004583308.1 KEGG: fre:Franean1_3485 hypothetical protein YP_004583309.1 TIGRFAM: FkbH; HAD-superfamily phosphatase, subfamily IIIC; KEGG: fri:FraEuI1c_4248 FkbH like protein YP_004583310.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fal:FRAAL4094 putative transmembrane efflux protein YP_004583311.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_3482 TetR family transcriptional regulator YP_004583312.1 KEGG: fal:FRAAL4082 hypothetical protein YP_004583313.1 TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: pjd:Pjdr2_5225 nitrilotriacetate monooxygenase protein component A YP_004583314.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: fre:Franean1_2514 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core YP_004583315.1 PFAM: ABC transporter-like; Binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: bfa:Bfae_27820 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; SMART: ATPase, AAA+ type, core YP_004583316.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: cai:Caci_2764 binding-protein-dependent transport systems inner membrane component YP_004583317.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583319.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: fra:Francci3_2888 haloacid dehalogenase-like hydrolase YP_004583320.1 TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: fal:FRAAL2706 hypothetical protein; PFAM: Thymidylate kinase-like YP_004583321.1 KEGG: sro:Sros_8221 DNA binding domain-containing protein; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: HTH transcriptional regulator, MerR YP_004583322.1 KEGG: mtb:TBMG_01674 hypothetical protein YP_004583323.1 PFAM: Uncharacterised protein family UPF0089; KEGG: sgr:SGR_725 hypothetical protein YP_004583324.1 PFAM: Phosphopantetheine-binding; KEGG: sma:SAV_3656 acyl carrier protein YP_004583325.1 KEGG: svi:Svir_15320 phosphoglycerate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region YP_004583326.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: fra:Francci3_0378 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004583327.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: fra:Francci3_0379 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004583328.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583329.1 SMART: Toll-Interleukin receptor; KEGG: fra:Francci3_1951 tetratricopeptide TPR_4 YP_004583330.1 KEGG: fal:FRAAL1400 hypothetical protein YP_004583331.1 PFAM: PilT protein, N-terminal; KEGG: bja:bll2434 plasmid stability protein YP_004583332.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583333.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004583334.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004583335.1 KEGG: fri:FraEuI1c_6411 putative F420-dependent enzyme; TIGRFAM: F420-binding domain, putative; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004583336.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: fre:Franean1_5274 endopeptidase Clp; PFAM: Peptidase S14, ClpP YP_004583337.1 KEGG: stp:Strop_0696 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004583338.1 TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; GAF; ATP-binding region, ATPase-like; KEGG: scb:SCAB_7111 hypothetical protein; SMART: Protein phosphatase 2C-related; GAF YP_004583339.1 KEGG: fal:FRAAL4833 putative monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; PFAM: Luciferase-like, subgroup YP_004583340.1 PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: fal:FRAAL4841 putative oxygenase YP_004583341.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: fre:Franean1_4257 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_004583342.1 PFAM: Amine oxidase; KEGG: fri:FraEuI1c_4934 amine oxidase YP_004583344.1 KEGG: mva:Mvan_3973 putative GAF sensor protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; GAF YP_004583345.1 KEGG: rop:ROP_pROB01-04010 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004583346.1 manually curated YP_004583347.1 KEGG: mva:Mvan_3973 putative GAF sensor protein; PFAM: Transcription regulator LuxR, C-terminal; GAF; SMART: Transcription regulator LuxR, C-terminal; GAF YP_004583348.1 KEGG: rop:ROP_46770 putative oxidoreductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004583349.1 PFAM: Crotonase, core; KEGG: rop:ROP_45730 putative enoyl-CoA hydratase YP_004583350.1 KEGG: rop:ROP_45740 putative fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004583351.1 PFAM: MaoC-like dehydratase; KEGG: rop:ROP_45750 hypothetical protein YP_004583352.1 PFAM: MaoC-like dehydratase; KEGG: rop:ROP_45760 hypothetical protein YP_004583353.1 KEGG: rop:ROP_45770 putative acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA oxidase/dehydrogenase, type 1 YP_004583354.1 KEGG: rop:ROP_45780 acetate--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004583355.1 KEGG: rop:ROP_45790 putative GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004583356.1 PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; KEGG: rop:ROP_45800 putative acyl-CoA dehydrogenase YP_004583357.1 KEGG: rop:ROP_45810 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004583358.1 KEGG: rop:ROP_45820 putative 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583359.1 KEGG: rop:ROP_45830 putative acetyl-CoA acyltransferase; TIGRFAM: Thiolase YP_004583360.1 KEGG: rop:ROP_45840 putative 4-hydroxybutyrate CoA-transferase YP_004583361.1 KEGG: rop:ROP_45850 hydroxymethylglutaryl-CoA lyase; PFAM: Pyruvate carboxyltransferase YP_004583362.1 KEGG: rop:ROP_45860 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583363.1 PFAM: Crotonase, core; KEGG: rop:ROP_45880 enoyl-CoA hydratase YP_004583364.1 KEGG: fre:Franean1_7093 integrase catalytic region YP_004583365.1 PFAM: Crotonase, core; KEGG: rop:ROP_45920 putative enoyl-CoA hydratase YP_004583366.1 KEGG: rop:ROP_45980 putative 2,4-dienoyl-CoA reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583367.1 KEGG: rop:ROP_46000 naphthoate synthase; PFAM: Crotonase, core YP_004583369.1 KEGG: rop:ROP_46980 cytochrome P450; PFAM: Cytochrome P450 YP_004583370.1 KEGG: rop:ROP_45680 ferredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004583371.1 PFAM: Ferredoxin; KEGG: rop:ROP_46800 2Fe-2S ferredoxin YP_004583372.1 KEGG: rop:ROP_46940 aryl-alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding YP_004583373.1 KEGG: rop:ROP_45660 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004583374.1 PFAM: Protein of unknown function DUF1486; KEGG: sti:Sthe_3338 protein of unknown function DUF1486 YP_004583375.1 KEGG: rop:ROP_53530 hypothetical protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004583376.1 KEGG: bbe:BBR47_29730 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; PFAM: Amidohydrolase 2 YP_004583377.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: nca:Noca_2142 hypothetical protein YP_004583378.1 KEGG: bur:Bcep18194_B2956 alpha/beta hydrolase; PFAM: Alpha/beta hydrolase fold-1 YP_004583379.1 KEGG: bxe:Bxe_A3556 p-cumate dioxygenase large subunit (CmtAb); PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal; Rieske [2Fe-2S] iron-sulphur domain YP_004583380.1 PFAM: Aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: ppf:Pput_2897 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_004583381.1 KEGG: ppf:Pput_2895 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583382.1 KEGG: rha:RHA1_ro10117 2-hydroxypenta-2,4-dienoate hydratase; PFAM: Fumarylacetoacetase, C-terminal-like YP_004583383.1 PFAM: Acetaldehyde dehydrogenase, C-terminal; Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Acetaldehyde dehydrogenase; HAMAP: Acetaldehyde dehydrogenase; KEGG: rer:RER_57570 acetaldehyde dehydrogenase YP_004583384.1 PFAM: Pyruvate carboxyltransferase; DmpG-like communication; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; HAMAP: 4-hydroxy-2-oxovalerate aldolase; KEGG: rha:RHA1_ro10112 4-hydroxy-2-ketovalerate aldolase YP_004583385.1 KEGG: ami:Amir_2275 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004583386.1 KEGG: mul:MUL_2876 putative regulatory protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal YP_004583387.1 KEGG: rop:ROP_46750 putative acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004583388.1 PFAM: Luciferase-like, subgroup; KEGG: rop:ROP_46170 putative oxidoreductase YP_004583389.1 KEGG: mra:MRA_0287 PE-PGRS family protein YP_004583390.1 PFAM: Protein of unknown function DUF140; KEGG: cwo:Cwoe_1620 protein of unknown function DUF140 YP_004583391.1 PFAM: Protein of unknown function DUF140; KEGG: cwo:Cwoe_1709 protein of unknown function DUF140 YP_004583392.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583393.1 PFAM: Crotonase, core; KEGG: tfu:Tfu_1259 enoyl-CoA hydratase YP_004583394.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: gbr:Gbro_3584 regulatory protein TetR YP_004583395.1 KEGG: rha:RHA1_ro03966 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase YP_004583396.1 KEGG: sen:SACE_6856 hypothetical protein YP_004583397.1 KEGG: ami:Amir_6629 hypothetical protein YP_004583398.1 PFAM: Protein of unknown function DUF140; KEGG: cwo:Cwoe_1620 protein of unknown function DUF140 YP_004583399.1 PFAM: Protein of unknown function DUF140; KEGG: cwo:Cwoe_1709 protein of unknown function DUF140 YP_004583400.1 PFAM: Mammalian cell entry related; KEGG: cwo:Cwoe_1622 mammalian cell entry related domain protein YP_004583401.1 PFAM: Mammalian cell entry related; KEGG: cwo:Cwoe_1622 mammalian cell entry related domain protein YP_004583402.1 PFAM: Mammalian cell entry related; KEGG: cwo:Cwoe_1624 mammalian cell entry related domain protein YP_004583403.1 PFAM: Mammalian cell entry related; KEGG: cwo:Cwoe_1625 mammalian cell entry related domain protein YP_004583404.1 PFAM: Mammalian cell entry related; KEGG: cwo:Cwoe_1626 mammalian cell entry related domain protein YP_004583405.1 PFAM: Mammalian cell entry related; KEGG: cwo:Cwoe_1627 virulence factor Mce family protein YP_004583406.1 KEGG: cwo:Cwoe_1628 RND superfamily protein-like exporter YP_004583407.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: pjd:Pjdr2_0444 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004583409.1 KEGG: mva:Mvan_0358 luciferase family protein; TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG2256, predicted; PFAM: Luciferase-like, subgroup YP_004583410.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_3396 TetR family transcriptional regulator YP_004583411.1 KEGG: fal:FRAAL1658 putative two-component system response regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; GAF YP_004583412.1 KEGG: fal:FRAAL1659 putative two-component system regulator; PFAM: Transcription regulator LuxR, C-terminal; GAF; SMART: Transcription regulator LuxR, C-terminal; GAF YP_004583413.1 PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: fal:FRAAL1660 putative acyl-CoA dehydrogenase YP_004583414.1 KEGG: fal:FRAAL1662 hypothetical protein YP_004583415.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: msm:MSMEG_0332 2-nitropropane dioxygenase, NPD YP_004583416.1 KEGG: fal:FRAAL1663 putative long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004583417.1 PFAM: Flavin reductase-like, FMN-binding; KEGG: fal:FRAAL1664 putative oxidoreductase YP_004583418.1 KEGG: fal:FRAAL1665 acetaldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004583419.1 KEGG: svi:Svir_30250 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase YP_004583420.1 KEGG: amd:AMED_7893 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_004583421.1 KEGG: mau:Micau_2556 transposase IS3/IS911 family protein YP_004583423.1 KEGG: fal:FRAAL1666 putative acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004583424.1 KEGG: fri:FraEuI1c_3274 carboxyl transferase; PFAM: Carboxyl transferase YP_004583425.1 KEGG: fri:FraEuI1c_3275 carbamoyl-phosphate synthase L chain ATP-binding protein; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment YP_004583426.1 KEGG: fri:FraEuI1c_3276 wyosine base formation domain-containing protein; TIGRFAM: Conserved hypothetical protein CHP03084; Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: Wyosine base formation YP_004583427.1 PFAM: Protein of unknown function DUF1446; KEGG: fal:FRAAL1670 hypothetical protein YP_004583428.1 KEGG: mav:MAV_5056 PEP-utilizing protein; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding YP_004583429.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msp:Mspyr1_00880 transcriptional regulator, TetR family YP_004583430.1 KEGG: rop:ROP_24690 hypothetical protein YP_004583431.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004583432.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004583434.1 PFAM: Nodulation protein A, NodA; KEGG: mno:Mnod_4025 acyltransferase NodA YP_004583435.1 PFAM: Polysaccharide deacetylase; KEGG: rhi:NGR_a03420 chitooligosaccharide deacetylase nodulation protein NodB; involved in nodulation factor synthesis YP_004583436.1 PFAM: Nodulation protein A, NodA YP_004583437.1 KEGG: xbo:XBJ1_1111 aminotransferase enzyme; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004583438.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mil:ML5_0846 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004583439.1 PFAM: Transposase, IS4-like; KEGG: fra:Francci3_3385 transposase, IS4 YP_004583440.1 PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: ara:Arad_9023 reverse transcriptase/maturase protein YP_004583441.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583442.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583443.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583444.1 PFAM: Recombinase; Resolvase, N-terminal; KEGG: saq:Sare_0612 recombinase YP_004583445.1 KEGG: fri:FraEuI1c_4923 response regulator receiver and ANTAR domain protein; PFAM: Signal transduction response regulator, receiver region; ANTAR; SMART: Signal transduction response regulator, receiver region YP_004583446.1 PFAM: Extracellular ligand-binding receptor; KEGG: fal:FRAAL4618 branched chain amino acid ABC transporter periplasmic substrate-binding protein YP_004583447.1 PFAM: MMPL; KEGG: fre:Franean1_3269 MmpL domain-containing protein YP_004583448.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_1681 TetR family transcriptional regulator YP_004583449.1 PFAM: NUDIX hydrolase domain; TIGRFAM: Isopentenyl-diphosphate delta-isomerase, type 1; HAMAP: Isopentenyl-diphosphate Delta-isomerase; KEGG: fre:Franean1_5570 isopentenyl-diphosphate delta-isomerase YP_004583450.1 KEGG: req:REQ_17180 3-hydroxybutyryl-CoA hydrolase; PFAM: Crotonase, core YP_004583452.1 PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: fre:Franean1_3497 superoxide dismutase YP_004583453.1 KEGG: fre:Franean1_3498 hypothetical protein YP_004583454.1 KEGG: fra:Francci3_1049 high-affinity nickel-transporter; TIGRFAM: Nickel/cobalt transporter, high-affinity, bacteria; PFAM: Nickel/cobalt transporter, high-affinity YP_004583455.1 KEGG: fal:FRAAL1661 hypothetical protein YP_004583456.1 manually curated; PFAM: Sporulation stage II, protein E C-terminal; ATP-binding region, ATPase-like; KEGG: sma:SAV_587 magnesium or manganese-dependent protein phosphatase; SMART: Protein phosphatase 2C-related; GAF YP_004583457.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sen:SACE_3446 TetR family transcriptional regulator YP_004583458.1 PFAM: MASE1; KEGG: sgr:SGR_311 putative integral membrane protein YP_004583459.1 KEGG: sgr:SGR_310 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related YP_004583460.1 KEGG: rcu:RCOM_0129140 hypothetical protein YP_004583461.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bid:Bind_0322 glyoxalase/bleomycin resistance protein/dioxygenase YP_004583462.1 KEGG: rer:RER_44680 F420-dependent oxidoreductase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv3520c; PFAM: Luciferase-like, subgroup YP_004583463.1 KEGG: svi:Svir_28760 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004583464.1 KEGG: fre:Franean1_2189 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_004583465.1 PFAM: Extracellular ligand-binding receptor; KEGG: fra:Francci3_1620 extracellular ligand-binding receptor YP_004583466.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583467.1 KEGG: fre:Franean1_2042 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily YP_004583468.1 SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain; TIGRFAM: DNA polymerase 1; KEGG: fre:Franean1_2043 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease YP_004583469.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; KEGG: fre:Franean1_2044 diguanylate cyclase/phosphodiesterase with GAF sensor; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF YP_004583470.1 PFAM: Coagulation factor 5/8 type, C-terminal; KEGG: fra:Francci3_1050 hypothetical protein YP_004583471.1 KEGG: fre:Franean1_5499 hypothetical protein YP_004583472.1 PFAM: Methyltransferase type 11; KEGG: fal:FRAAL0751 SAM-dependent methyltransferase YP_004583473.1 PFAM: Ribosomal protein S1, RNA binding domain; KEGG: fre:Franean1_5494 30S ribosomal protein S1 YP_004583474.1 KEGG: fre:Franean1_2070 hypothetical protein YP_004583475.1 TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: fre:Franean1_2048 dephospho-CoA kinase YP_004583476.1 SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: fra:Francci3_1626 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein YP_004583480.1 KEGG: sco:SCO4697 integral membrane protein YP_004583481.1 PFAM: Methyltransferase type 11; KEGG: fal:FRAAL3382 putative trans-aconitate 2-methyltransferase YP_004583482.1 KEGG: fra:Francci3_1627 putative transmembrane alanine and leucine rich protein YP_004583483.1 PFAM: Carbohydrate/purine kinase; KEGG: sti:Sthe_0168 PfkB domain protein YP_004583485.1 KEGG: sro:Sros_3181 NTPase (NACHT family)-like protein YP_004583486.1 KEGG: met:M446_6124 argininosuccinate synthase; PFAM: Argininosuccinate synthase YP_004583487.1 KEGG: fri:FraEuI1c_1739 hypothetical protein YP_004583488.1 KEGG: fra:Francci3_2130 transposase, IS4 YP_004583489.1 KEGG: mau:Micau_4413 hypothetical protein YP_004583490.1 PFAM: PhoU; KEGG: cai:Caci_8217 phosphate uptake regulator, PhoU YP_004583491.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; KEGG: fre:Franean1_4181 TetR family transcriptional regulator YP_004583492.1 KEGG: fre:Franean1_0166 hypothetical protein YP_004583493.1 TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: sma:SAV_1038 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase YP_004583494.1 TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: sro:Sros_7481 putative sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA; DSBA oxidoreductase YP_004583495.1 KEGG: fra:Francci3_1630 beta-lactamase-like protein YP_004583496.1 TIGRFAM: Excinuclease ABC, A subunit; HAMAP: UvrABC system protein A; KEGG: fal:FRAAL4595 excinuclease ABC subunit A; PFAM: ABC transporter-like YP_004583497.1 PFAM: Streptomyces sporulation/cell division protein SsgA; KEGG: fre:Franean1_2058 sporulation and cell division protein SsgA YP_004583498.1 SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: fra:Francci3_1633 excinuclease ABC subunit C; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif YP_004583499.1 HAMAP: ATPase, P-loop-containing; KEGG: fre:Franean1_2060 hypothetical protein YP_004583500.1 KEGG: fra:Francci3_1635 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0052; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YP_004583501.1 TIGRFAM: Sporulation regulator WhiA; HAMAP: sporulation transcription regulator whiA; KEGG: fra:Francci3_1636 hypothetical protein; PFAM: Sporulation regulator WhiA; Sporulation regulator WhiA, N-terminal YP_004583502.1 TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: fra:Francci3_1312 aconitase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_004583503.1 PFAM: NLP/P60; KEGG: fal:FRAAL2263 putative NLP/P60 family protein (putative secreted protein) (partial match) YP_004583504.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: fre:Franean1_5003 CDP-alcohol phosphatidyltransferase YP_004583505.1 KEGG: fre:Franean1_5002 nucleotidyl transferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YP_004583506.1 TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: fri:FraEuI1c_2944 glycine cleavage system H protein; PFAM: Glycine cleavage H-protein YP_004583507.1 KEGG: fre:Franean1_4997 FHA domain-containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated YP_004583508.1 KEGG: fra:Francci3_1469 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004583509.1 PFAM: Protein of unknown function DUF151; KEGG: fal:FRAAL2273 hypothetical protein YP_004583510.1 SMART: HTH transcriptional regulator, MerR; KEGG: fal:FRAAL2275 MerR family transcriptional regulator YP_004583511.1 KEGG: sma:SAV_7048 cation efflux system protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein YP_004583512.1 TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; PFAM: ABC transporter-like; KEGG: fri:FraEuI1c_2949 daunorubicin resistance ABC transporter ATPase subunit; SMART: ATPase, AAA+ type, core YP_004583513.1 PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1473 hypothetical protein YP_004583514.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: fra:Francci3_1475 cell divisionFtsK/SpoIIIE YP_004583515.1 KEGG: fal:FRAAL2280 hypothetical protein YP_004583516.1 KEGG: fra:Francci3_1477 hypothetical protein YP_004583517.1 KEGG: fal:FRAAL2283 putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 (trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase); PFAM: Glycosyl transferase, family 20 YP_004583518.1 KEGG: fal:FRAAL2284 hypothetical protein YP_004583519.1 PFAM: Phosphoglycerate mutase; KEGG: fal:FRAAL2285 hypothetical protein YP_004583520.1 PFAM: Transcription factor WhiB; KEGG: fal:FRAAL2286 WhiB family cell cycle control transcriptional regulator YP_004583522.1 PFAM: NLP/P60; Peptidoglycan binding-like; KEGG: bcl:ABC1938 cell wall lytic activity YP_004583523.1 SMART: Rhodanese-like; KEGG: fri:FraEuI1c_3038 rhodanese domain protein YP_004583524.1 PFAM: Cysteine dioxygenase type I; KEGG: fre:Franean1_4981 cysteine dioxygenase type I YP_004583525.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sna:Snas_2027 glyoxalase/bleomycin resistance protein/dioxygenase YP_004583526.1 PFAM: Major facilitator superfamily MFS-1; KEGG: mva:Mvan_5862 major facilitator superfamily transporter YP_004583527.1 KEGG: rop:ROP_pROB01-03280 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_004583528.1 KEGG: rha:RHA1_ro11220 ArsR family transcriptional regulator; PFAM: Rhodanese-like; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; Rhodanese-like YP_004583529.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583531.1 PFAM: Peroxiredoxin, OsmC-like protein; Methyltransferase type 11; KEGG: fri:FraEuI1c_0045 OsmC family protein YP_004583532.1 KEGG: gob:Gobs_0142 cytochrome P450; PFAM: Cytochrome P450 YP_004583533.1 PFAM: EF-Hand domain; KEGG: nda:Ndas_3812 putative signal transduction protein with EFhand domain YP_004583534.1 KEGG: fre:Franean1_4867 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DSH, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004583535.1 KEGG: fal:FRAAL2884 sec-independent protein secretion pathway component TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase YP_004583536.1 TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: fra:Francci3_2607 twin arginine-targeting protein translocase; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106 YP_004583537.1 PFAM: Sulphatase-modifying factor; KEGG: sro:Sros_3062 non-specific serine/threonine protein kinase YP_004583538.1 KEGG: tcu:Tcur_0054 sulfatase; PFAM: Sulfatase YP_004583539.1 KEGG: tcu:Tcur_0054 sulfatase; PFAM: Sulfatase YP_004583540.1 KEGG: fri:FraEuI1c_3743 hypothetical protein YP_004583541.1 KEGG: fal:FRAAL2881 hypothetical protein YP_004583542.1 KEGG: fra:Francci3_2610 transcriptional regulator-like protein YP_004583543.1 PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: fra:Francci3_2611 peptidylprolyl isomerase, FKBP-type YP_004583544.1 KEGG: fre:Franean1_4874 hypothetical protein; TIGRFAM: proteasome accessory factor PafA; PFAM: Protein of unknown function DUF245, C-terminal; Protein of unknown function DUF275, N-terminal YP_004583545.1 KEGG: fre:Franean1_4878 20S proteasome A and B subunits; TIGRFAM: proteasome, alpha subunit; PFAM: Proteasome, subunit alpha/beta YP_004583546.1 KEGG: fre:Franean1_4879 20S proteasome A and B subunits; TIGRFAM: proteasome, beta subunit; PFAM: Proteasome, subunit alpha/beta YP_004583548.1 TIGRFAM: ubiquitin-like protein Pup; HAMAP: Ubiquitin-like protein pup; KEGG: fre:Franean1_4880 hypothetical protein; PFAM: Protein of unknown function DUF797 YP_004583549.1 KEGG: fre:Franean1_4881 hypothetical protein; TIGRFAM: proteasome accessory factor PafA2; PFAM: Protein of unknown function DUF245, C-terminal; Protein of unknown function DUF275, N-terminal YP_004583550.1 SMART: ATPase, AAA+ type, core; manually curated; TIGRFAM: proteasome ATPase; KEGG: fre:Franean1_4882 ATPase central domain-containing protein; PFAM: ATPase, AAA-type, core YP_004583551.1 KEGG: fra:Francci3_2631 hypothetical protein YP_004583552.1 KEGG: fre:Franean1_4884 tRNA (adenine-N(1)-)-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004583553.1 PFAM: Peptidase M50; KEGG: fal:FRAAL2866 hypothetical protein YP_004583554.1 KEGG: fri:FraEuI1c_3758 hypothetical protein YP_004583555.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL2864 outer membrane lipoprotein ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004583556.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: fal:FRAAL2863 putative ABC transport system integral membrane protein YP_004583557.1 KEGG: sro:Sros_4445 putative transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004583558.1 TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: fri:FraEuI1c_1146 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain YP_004583559.1 KEGG: fal:FRAAL5434 hypothetical protein YP_004583560.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583561.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: fra:Francci3_2304 phage integrase YP_004583562.1 PFAM: Methylenetetrahydrofolate reductase; KEGG: fal:FRAAL3686 putative methylenetetrahydrofolate reductase YP_004583564.1 KEGG: mta:Moth_0364 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004583565.1 KEGG: nfa:nfa6270 hypothetical protein YP_004583566.1 KEGG: sil:SPO3612 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type YP_004583567.1 PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: gmc:GY4MC1_0190 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004583568.1 KEGG: sgr:SGR_3066 hypothetical protein YP_004583569.1 KEGG: sma:SAV_4529 hypothetical protein YP_004583571.1 KEGG: sco:SCO4541 hypothetical protein YP_004583572.1 KEGG: sco:SCO4697 integral membrane protein YP_004583573.1 KEGG: aas:Aasi_0842 hypothetical protein YP_004583574.1 KEGG: scb:SCAB_56911 integral membrane protein YP_004583575.1 PFAM: NUDIX hydrolase domain; KEGG: sma:SAV_5404 hypothetical protein YP_004583576.1 PFAM: Transglycosylase-like; KEGG: fre:Franean1_6585 transglycosylase domain-containing protein YP_004583577.1 KEGG: fal:FRAAL1439 putative glycosyl transferase (partial match); TIGRFAM: Glycosyl transferase, family 2, hopene-associated, HpnB; PFAM: Glycosyl transferase, family 2 YP_004583578.1 KEGG: ecb:100058293 hephaestin-like 1; PFAM: Multicopper oxidase, type 2 YP_004583579.1 KEGG: fra:Francci3_2312 hypothetical protein YP_004583580.1 PFAM: Amidohydrolase 1; KEGG: fra:Francci3_2992 amidohydrolase YP_004583581.1 KEGG: fra:Francci3_2991 hypothetical protein YP_004583582.1 KEGG: fre:Franean1_4241 hypothetical protein YP_004583583.1 KEGG: fra:Francci3_2652 hypothetical protein YP_004583584.1 KEGG: fra:Francci3_2651 hypothetical protein YP_004583585.1 KEGG: fra:Francci3_2650 membrane protein-like protein YP_004583586.1 PFAM: Amine oxidase; KEGG: fal:FRAAL2849 hypothetical protein YP_004583587.1 KEGG: fra:Francci3_2648 hypothetical protein YP_004583588.1 KEGG: fra:Francci3_2647 membrane protein-like protein YP_004583589.1 KEGG: fal:FRAAL2853 putative exodeoxyribonuclease V YP_004583590.1 TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: tbi:Tbis_1937 undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_004583591.1 KEGG: fri:FraEuI1c_3765 phosphoglycerate mutase; TIGRFAM: putative phosphomutase; PFAM: Phosphoglycerate mutase YP_004583592.1 KEGG: fal:FRAAL2856 hypothetical protein YP_004583593.1 TIGRFAM: Mycothiol biosynthesis protein, MshC; KEGG: fra:Francci3_2642 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal YP_004583594.1 KEGG: fra:Francci3_2641 hypothetical protein YP_004583595.1 KEGG: fal:FRAAL2860 hypothetical protein YP_004583596.1 TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: tcu:Tcur_2292 methionine synthase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region YP_004583597.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL0476 putative acetyltransferase YP_004583598.1 KEGG: fal:FRAAL0477 hypothetical protein YP_004583600.1 KEGG: mil:ML5_5980 metal-dependent phosphohydrolase hd sub domain protein YP_004583601.1 KEGG: fal:FRAAL2861 putative hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase YP_004583602.1 PFAM: Major facilitator superfamily MFS-1; KEGG: pol:Bpro_4250 major facilitator transporter YP_004583603.1 KEGG: cwo:Cwoe_0346 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004583604.1 PFAM: Helix-turn-helix, HxlR type; KEGG: fre:Franean1_2255 HxlR family transcriptional regulator YP_004583605.1 KEGG: tcu:Tcur_4707 NADH dehydrogenase (ubiquinone) 30 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit YP_004583606.1 KEGG: tcu:Tcur_4706 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase YP_004583607.1 KEGG: tcu:Tcur_4705 hypothetical protein YP_004583608.1 KEGG: tcu:Tcur_4704 respiratory-chain NADH dehydrogenase subunit 1 YP_004583609.1 PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: nml:Namu_2984 NADH ubiquinone oxidoreductase 20 kDa subunit YP_004583610.1 KEGG: sco:SCO3722 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004583611.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583612.1 PFAM: Transposase, Tn3; KEGG: sma:SAV_260 transposase YP_004583613.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583614.1 KEGG: nfa:nfa14610 acyltransferase PapA5 YP_004583615.1 KEGG: stp:Strop_1137 hypothetical protein YP_004583616.1 KEGG: sma:SAV_517 hypothetical protein YP_004583617.1 PFAM: Resolvase, N-terminal; KEGG: bwe:BcerKBAB4_5396 resolvase domain-containing protein YP_004583618.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583619.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiB; HAMAP: Cobalamin biosynthesis protein cbiB; KEGG: fre:Franean1_4864 cobalamin biosynthesis protein; PFAM: Cobalamin (vitamin B12) biosynthesis CbiB YP_004583620.1 TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: fal:FRAAL2887 cobyric acid synthase; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ-like glutamine amidotransferase YP_004583621.1 KEGG: fri:FraEuI1c_5733 heat shock protein 70 YP_004583622.1 TIGRFAM: Cobaltochelatase, CobN subunit; KEGG: fre:Franean1_4862 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase YP_004583624.1 KEGG: cai:Caci_8455 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004583625.1 KEGG: cai:Caci_8454 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004583626.1 KEGG: msp:Mspyr1_46680 hypothetical protein YP_004583627.1 PFAM: Helix-turn-helix, HxlR type; KEGG: nml:Namu_0945 HxlR family transcriptional regulator YP_004583628.1 PFAM: Methyltransferase type 11; KEGG: plu:plu4833 hypothetical protein YP_004583629.1 PFAM: Glycosyl transferase, family 2; KEGG: cno:NT01CX_1795 succinoglycan biosynthesis protein ExoA YP_004583630.1 PFAM: Polysaccharide biosynthesis protein; KEGG: sro:Sros_6501 membrane protein involved in the export of O-antigen and teichoic acid-like protein YP_004583631.1 PFAM: Glycosyl transferase, group 1; KEGG: mex:Mext_3565 glycosyl transferase group 1 YP_004583632.1 PFAM: Bacterial sugar transferase; KEGG: afw:Anae109_1243 sugar transferase YP_004583633.1 PFAM: Nucleotidyl transferase; KEGG: putative nucleotidyl transferase YP_004583634.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: sat:SYN_01128 nucleotide-sugar aminotransferase YP_004583635.1 PFAM: Lipopolysaccharide biosynthesis; KEGG: kfl:Kfla_2728 lipopolysaccharide biosynthesis protein YP_004583636.1 KEGG: rrs:RoseRS_4078 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004583637.1 KEGG: fal:FRAAL0293 threonyl-tRNA synthetase (threonine--tRNA ligase); TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; Anticodon-binding YP_004583638.1 PFAM: O-antigen ligase-related; KEGG: sti:Sthe_1139 O-antigen polymerase YP_004583639.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gob:Gobs_0144 antibiotic biosynthesis monooxygenase YP_004583640.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gob:Gobs_0143 FAD-binding monooxygenase protein YP_004583641.1 PFAM: Protein of unknown function DUF2266, transmembrane; KEGG: sro:Sros_4140 hypothetical protein YP_004583642.1 PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: rxy:Rxyl_0724 hypothetical protein YP_004583643.1 KEGG: sgr:SGR_5254 major facilitator superfamily permease; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004583644.1 PFAM: Globin, truncated bacterial-like; KEGG: tbi:Tbis_2550 globin YP_004583645.1 KEGG: fri:FraEuI1c_0351 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004583646.1 KEGG: amd:AMED_0983 two-component system response regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004583647.1 PFAM: Polyketide synthesis cyclase; KEGG: mil:ML5_4893 polyketide synthesis cyclase YP_004583648.1 PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Acetyl-CoA carboxylase, alpha subunit; KEGG: mil:ML5_4894 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_004583649.1 KEGG: mau:Micau_3500 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment YP_004583651.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: cai:Caci_1089 cyclase/dehydrase YP_004583652.1 PFAM: Cupin 2, conserved barrel; KEGG: fre:Franean1_2392 cupin 2 domain-containing protein YP_004583653.1 KEGG: fre:Franean1_2393 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004583654.1 KEGG: fal:FRAAL4386 polyketide beta-ketoacyl synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004583655.1 KEGG: cai:Caci_4357 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004583656.1 PFAM: von Willebrand factor, type A; ATPase associated with various cellular activities, AAA-5; KEGG: fal:FRAAL3727 putative magnesium-chelatase subunit; SMART: von Willebrand factor, type A; ATPase, AAA+ type, core YP_004583657.1 TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: fal:FRAAL3728 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YP_004583658.1 TIGRFAM: Cobyrinic acid a,c-diamide synthase CbiA; HAMAP: Cobyrinic acid A,C-diamide synthase; KEGG: fre:Franean1_4160 cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase YP_004583659.1 KEGG: fre:Franean1_4161 precorrin-2 C20-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; PFAM: Tetrapyrrole methylase YP_004583660.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase, core; KEGG: tcu:Tcur_1314 precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole methylase YP_004583661.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; KEGG: fre:Franean1_4162 precorrin-4 C11-methyltransferase; PFAM: Cobalamin (vitamin B12) biosynthesis CbiG, core; Tetrapyrrole methylase YP_004583663.1 KEGG: fre:Franean1_4163 cobalamin (vitamin B12) biosynthesis CbiX protein; PFAM: Cobalamin (vitamin B12) biosynthesis CbiX YP_004583664.1 KEGG: fri:FraEuI1c_7071 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_004583666.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004583667.1 PFAM: Protein of unknown function DUF820; KEGG: sen:SACE_1447 hypothetical protein YP_004583668.1 KEGG: ara:Arad_9558 calmodulin-binding protein CaM-BP15 YP_004583669.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004583670.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004583671.1 PFAM: Plasmid stabilisation system; KEGG: gbr:Gbro_2644 plasmid stabilization system YP_004583672.1 KEGG: fra:Francci3_2285 hypothetical protein YP_004583673.1 KEGG: fre:Franean1_4167 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004583674.1 PFAM: Protein of unknown function DUF2088; KEGG: fre:Franean1_4168 hypothetical protein YP_004583675.1 PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: fre:Franean1_4169 alcohol dehydrogenase YP_004583676.1 KEGG: fre:Franean1_4170 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; PFAM: Male sterility, NAD-binding; Haloacid dehalogenase-like hydrolase YP_004583677.1 KEGG: fra:Francci3_2275 5'-3' exonuclease; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2 YP_004583678.1 KEGG: fri:FraEuI1c_3657 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type YP_004583679.1 PFAM: Amidohydrolase 3; KEGG: fra:Francci3_2273 amidohydrolase 3 YP_004583680.1 PFAM: Small multidrug resistance protein; KEGG: rxy:Rxyl_1319 small multidrug resistance protein YP_004583681.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004583682.1 PFAM: Glycosyl transferase, family 2; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: fre:Franean1_4174 apolipoprotein N-acyltransferase YP_004583683.1 KEGG: fre:Franean1_4175 hypothetical protein YP_004583684.1 TIGRFAM: Methionine sulphoxide reductase B; KEGG: fra:Francci3_2268 protein-methionine-S-oxide reductase; PFAM: Methionine sulphoxide reductase B YP_004583685.1 KEGG: fri:FraEuI1c_5955 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004583686.1 PFAM: Cyclodeaminase/cyclohydrolase; KEGG: fre:Franean1_4182 formiminotransferase-cyclodeaminase YP_004583687.1 HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: fre:Franean1_4183 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004583688.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: fra:Francci3_1491 diguanylate cyclase; SMART: Diguanylate cyclase, predicted YP_004583689.1 TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: fra:Francci3_1490 aminotransferase; PFAM: Aminotransferase class-III YP_004583690.1 KEGG: fre:Franean1_2498 hypothetical protein YP_004583691.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: fri:FraEuI1c_5902 phytanoyl-CoA dioxygenase YP_004583692.1 PFAM: Peptidase S54, rhomboid; KEGG: fre:Franean1_4977 rhomboid family protein YP_004583695.1 KEGG: fra:Francci3_3736 hypothetical protein YP_004583696.1 TIGRFAM: Pyruvate carboxylase; KEGG: fre:Franean1_6501 pyruvate carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Pyruvate carboxyltransferase; Conserved carboxylase region; Biotin/lipoyl attachment YP_004583697.1 PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; KEGG: fra:Francci3_2987 SARP family transcriptional regulator YP_004583699.1 PFAM: Asparagine synthase; KEGG: fra:Francci3_2986 asparagine synthase YP_004583700.1 KEGG: fri:FraEuI1c_0243 hypothetical protein YP_004583701.1 KEGG: fri:FraEuI1c_0242 hypothetical protein YP_004583702.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: fra:Francci3_2983 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004583703.1 KEGG: fre:Franean1_2506 hypothetical protein YP_004583704.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583705.1 PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: fre:Franean1_4903 hypothetical protein YP_004583706.1 KEGG: msm:MSMEG_0342 hypothetical protein YP_004583707.1 TIGRFAM: Redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: stp:Strop_1494 redox-sensitive transcriptional activator SoxR; SMART: HTH transcriptional regulator, MerR YP_004583708.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004583709.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583710.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583711.1 KEGG: cai:Caci_0353 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004583712.1 KEGG: fre:Franean1_6514 putative ABC transporter integral membrane protein YP_004583713.1 manually curated; PFAM: ABC transporter-like; KEGG: fre:Franean1_6513 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004583714.1 KEGG: fal:FRAAL0665 putative two-component system response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004583715.1 PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; KEGG: fre:Franean1_6510 integral membrane sensor signal transduction histidine kinase YP_004583717.1 PFAM: Protein of unknown function DUF156; KEGG: gob:Gobs_3602 hypothetical protein YP_004583718.1 PFAM: Heavy metal transport/detoxification protein; KEGG: saq:Sare_0534 copper ion binding protein YP_004583719.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: sen:SACE_6611 putative cation-transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase YP_004583720.1 KEGG: ssc:100519088 hypothetical protein LOC100519088 YP_004583724.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583725.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004583726.1 PFAM: Radical SAM; KEGG: geo:Geob_0669 radical SAM domain protein YP_004583727.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Dienelactone hydrolase; KEGG: cai:Caci_6672 DegT/DnrJ/EryC1/StrS aminotransferase YP_004583728.1 KEGG: bcv:Bcav_3519 phytanoyl-CoA dioxygenase YP_004583729.1 KEGG: rba:RB9261 hypothetical protein YP_004583730.1 PFAM: ROK; KEGG: mil:ML5_4104 rok family protein YP_004583731.1 PFAM: Protein of unknown function DUF1876; KEGG: nca:Noca_0283 hypothetical protein YP_004583732.1 PFAM: Protein of unknown function DUF72; KEGG: sma:SAV_6567 hypothetical protein YP_004583733.1 KEGG: scb:SCAB_81721 lipoprotein YP_004583734.1 PFAM: Protein of unknown function DUF1025; KEGG: sro:Sros_9058 hypothetical protein YP_004583735.1 KEGG: fra:Francci3_3863 peptidase S1 and S6, chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF YP_004583736.1 PFAM: Peptidoglycan binding-like; Lytic transglycosylase-like, catalytic; KEGG: fra:Francci3_2988 peptidoglycan binding domain-containing protein YP_004583738.1 PFAM: NLP/P60; KEGG: fra:Francci3_0285 NLP/P60 YP_004583739.1 KEGG: sen:SACE_1965 putative DNA binding protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004583740.1 TIGRFAM: Transketolase, bacterial-like; KEGG: afw:Anae109_2025 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal YP_004583741.1 KEGG: fra:Francci3_1352 SPFH domain-containing protein/band 7 family protein; PFAM: Band 7 protein; SMART: Band 7 protein YP_004583742.1 PFAM: Nodulation efficiency, NfeD; KEGG: fri:FraEuI1c_2305 protein of unknown function DUF107 YP_004583743.1 KEGG: sne:SPN23F_17820 cell wall surface anchored protein YP_004583744.1 PFAM: Iron permease FTR1; Peptidase M75, Imelysin; KEGG: fra:Francci3_3403 iron permease FTR1 YP_004583745.1 KEGG: fra:Francci3_3404 Tat-translocated enzyme; TIGRFAM: Tat-translocated enzyme; Twin-arginine translocation pathway, signal sequence; Dyp-type peroxidase; PFAM: Dyp-type peroxidase YP_004583746.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583747.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004583748.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583749.1 PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: ara:Arad_9023 reverse transcriptase/maturase protein YP_004583751.1 KEGG: fal:FRAAL6340 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat YP_004583752.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL4097 TetR family transcriptional regulator YP_004583753.1 PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; KEGG: fal:FRAAL4078 SARP family pathway specific transcriptional activator YP_004583754.1 KEGG: kfl:Kfla_0535 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004583755.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL3263 TetR family transcriptional regulator YP_004583756.1 TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: tbi:Tbis_1592 monooxygenase YP_004583757.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004583758.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fre:Franean1_3477 binding-protein-dependent transport systems inner membrane component YP_004583759.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL0338 ABC transporter oligopeptide permease YP_004583760.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fra:Francci3_2767 extracellular solute-binding protein YP_004583761.1 PFAM: FAD dependent oxidoreductase; KEGG: nfa:nfa25940 hypothetical protein YP_004583762.1 KEGG: rha:RHA1_ro10221 hypothetical protein YP_004583763.1 KEGG: tbi:Tbis_3237 hypothetical protein YP_004583764.1 KEGG: tbi:Tbis_3236 hydrogenase expression/formation protein HypD; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein YP_004583765.1 KEGG: tbi:Tbis_3235 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC YP_004583766.1 KEGG: tbi:Tbis_3234 hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein YP_004583767.1 KEGG: tbi:Tbis_3233 putative sedoheptulose 7-phosphate isomerase YP_004583768.1 KEGG: tbi:Tbis_3232 hypothetical protein YP_004583769.1 KEGG: tbi:Tbis_3231 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC YP_004583770.1 KEGG: tbi:Tbis_3230 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: Hydrogenase maturation factor, HypF-type; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type YP_004583771.1 KEGG: tbi:Tbis_3225 hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein YP_004583772.1 PFAM: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: tbi:Tbis_3220 hydrogenase expression/synthesis HypA YP_004583773.1 KEGG: fra:Francci3_1079 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like YP_004583774.1 manually curated; KEGG: fre:Franean1_4461 putative transposase YP_004583775.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_3466 TetR family transcriptional regulator YP_004583776.1 KEGG: tro:trd_1687 lipase YP_004583777.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fre:Franean1_3956 alpha/beta hydrolase fold YP_004583778.1 KEGG: svi:Svir_22820 Zn-dependent hydrolase, glyoxylase YP_004583779.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: fri:FraEuI1c_1952 endopeptidase Clp; PFAM: Peptidase S14, ClpP YP_004583780.1 KEGG: tcu:Tcur_0051 class IV aminotransferase; manually curated; PFAM: Aminotransferase, class IV YP_004583781.1 KEGG: fra:Francci3_2280 hypothetical protein YP_004583782.1 KEGG: fra:Francci3_2281 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004583783.1 PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: amd:AMED_7547 putative serine protease YP_004583784.1 PFAM: Nitroreductase-like; KEGG: fre:Franean1_1972 hypothetical protein YP_004583785.1 PFAM: UspA; KEGG: fal:FRAAL4747 stress-inducible protein YP_004583787.1 PFAM: Heat shock protein Hsp20; KEGG: ach:Achl_1698 heat shock protein HSP20 YP_004583788.1 TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: fra:Francci3_3024 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal YP_004583789.1 HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: fal:FRAAL5002 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase YP_004583790.1 PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: fre:Franean1_1917 histidinol-phosphate aminotransferase YP_004583791.1 PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: fre:Franean1_1916 histidinol dehydrogenase YP_004583793.1 PFAM: PilT protein, N-terminal; KEGG: fri:FraEuI1c_2388 PilT protein domain protein YP_004583794.1 KEGG: fra:Francci3_2060 hypothetical protein YP_004583795.1 TIGRFAM: Prevent-host-death protein; KEGG: fra:Francci3_2555 prevent-host-death protein YP_004583796.1 KEGG: fra:Francci3_2556 addiction module toxin, Txe/YoeB; TIGRFAM: Addiction module toxin, Txe/YoeB; PFAM: Addiction module toxin, Txe/YoeB YP_004583797.1 PFAM: Protein of unknown function DUF574; KEGG: fal:FRAAL5458 hypothetical protein YP_004583798.1 KEGG: sen:SACE_0882 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02679; PFAM: Conserved hypothetical protein CHP02679 YP_004583799.1 TIGRFAM: Conserved hypothetical protein CHP02680; KEGG: sen:SACE_0885 hypothetical protein YP_004583800.1 KEGG: sen:SACE_0884 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02678; PFAM: Conserved hypothetical protein CHP02678 YP_004583801.1 KEGG: sen:SACE_0883 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02677; PFAM: Conserved hypothetical protein CHP02677 YP_004583803.1 PFAM: Protein of unknown function DUF1486; KEGG: geo:Geob_0973 protein of unknown function DUF1486 YP_004583804.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_0302 putative transcriptional regulator, TetR family YP_004583805.1 KEGG: msm:MSMEG_0041 hypothetical protein YP_004583806.1 KEGG: fal:FRAAL3289 hypothetical protein YP_004583807.1 KEGG: fri:FraEuI1c_1851 hypothetical protein YP_004583808.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: fal:FRAAL5045 peroxiredoxin YP_004583809.1 KEGG: fre:Franean1_1862 hypothetical protein YP_004583810.1 KEGG: fra:Francci3_3056 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047 YP_004583811.1 KEGG: fal:FRAAL5051 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type YP_004583812.1 PFAM: Pirin, N-terminal; KEGG: msp:Mspyr1_01310 pirin-related protein YP_004583813.1 KEGG: fal:FRAAL5053 hypothetical protein YP_004583814.1 PFAM: CoA-binding; KEGG: fra:Francci3_3063 CoA-binding YP_004583815.1 KEGG: fre:Franean1_1850 plasmid stabilization system protein YP_004583816.1 PFAM: MHYT; KEGG: fre:Franean1_0988 putative integral membrane sensor protein YP_004583817.1 PFAM: Formyl transferase, C-terminal; Formyl transferase, N-terminal; Crotonase, core; KEGG: amd:AMED_3937 formyl transferase-like protein YP_004583818.1 PFAM: Bacterial stress protein; KEGG: fal:FRAAL5064 tellurium resistance protein YP_004583819.1 KEGG: fre:Franean1_1845 hypothetical protein YP_004583820.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: fre:Franean1_0568 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal YP_004583821.1 KEGG: fre:Franean1_0567 hypothetical protein YP_004583824.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: fra:Francci3_1381 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_004583825.1 KEGG: fal:FRAAL2151 hypothetical protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal YP_004583826.1 KEGG: fri:FraEuI1c_2337 hypothetical protein YP_004583827.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: fri:FraEuI1c_2336 (p)ppGpp synthetase I, SpoT/RelA; PFAM: TGS; RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; Amino acid-binding ACT YP_004583828.1 TIGRFAM: RelA/SpoT protein; KEGG: fal:FRAAL2147 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase); PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT YP_004583829.1 manually curated; KEGG: rno:313620 serine/arginine repetitive matrix 1 YP_004583830.1 TIGRFAM: Adenine phosphoribosyl transferase; HAMAP: Adenine phosphoribosyl transferase; KEGG: fri:FraEuI1c_2334 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase YP_004583831.1 KEGG: fal:FRAAL2145 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein YP_004583832.1 KEGG: fra:Francci3_1373 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein YP_004583833.1 KEGG: fre:Franean1_5143 preprotein translocase, YajC subunit; TIGRFAM: YajC; PFAM: YajC YP_004583834.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: fra:Francci3_1371 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal YP_004583835.1 TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; KEGG: fal:FRAAL2140 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal YP_004583836.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: fre:Franean1_5146 Holliday junction resolvase YP_004583837.1 TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: fre:Franean1_5147 hypothetical protein; PFAM: Protein of unknown function DUF28 YP_004583838.1 TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; HAMAP: Glutamine amidotransferase subunit pdxT; KEGG: fri:FraEuI1c_2326 SNO glutamine amidotransferase; PFAM: SNO glutamine amidotransferase YP_004583839.1 TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: fra:Francci3_1366 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein YP_004583840.1 KEGG: fal:FRAAL2135 hypothetical protein YP_004583841.1 KEGG: fra:Francci3_1364 phosphatidylinositol alpha-mannosyltransferase; PFAM: Glycosyl transferase, group 1 YP_004583842.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: fra:Francci3_1363 lipid A biosynthesis lauroyl acyltransferase YP_004583843.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: fal:FRAAL2132 putative phosphatidylinositol synthase YP_004583844.1 KEGG: fri:FraEuI1c_2320 small GTP-binding protein; TIGRFAM: Small GTP-binding protein; PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal YP_004583845.1 PFAM: Histidine triad (HIT) protein; KEGG: fra:Francci3_1360 histidine triad (HIT) protein YP_004583846.1 KEGG: fre:Franean1_5157 cytochrome P450; PFAM: Cytochrome P450 YP_004583847.1 PFAM: Streptomyces sporulation/cell division protein SsgA; KEGG: fra:Francci3_1359 sporulation and cell division protein SsgA YP_004583848.1 KEGG: fre:Franean1_5159 anthranilate synthase component I/chorismate-binding protein; PFAM: Chorismate binding, C-terminal YP_004583849.1 KEGG: fal:FRAAL3562 putative HTH-type transcriptional regulator; manually curated; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal YP_004583850.1 KEGG: fre:Franean1_5160 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic YP_004583851.1 KEGG: fre:Franean1_5161 hypothetical protein YP_004583852.1 PFAM: Isochorismatase-like; KEGG: fri:FraEuI1c_2314 isochorismatase hydrolase YP_004583853.1 KEGG: fre:Franean1_5163 hypothetical protein YP_004583854.1 KEGG: fra:Francci3_1353 hypothetical protein YP_004583855.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Glycogen debranching enzyme GlgX; KEGG: fre:Franean1_5164 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region YP_004583856.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Malto-oligosyltrehalose synthase; KEGG: fre:Franean1_5165 malto-oligosyltrehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic region YP_004583857.1 KEGG: tfu:Tfu_1593 CRISPR-associated helicase Cas3 family protein protein YP_004583858.1 KEGG: tfu:Tfu_1593 CRISPR-associated helicase Cas3 family protein protein YP_004583860.1 PFAM: ABC transporter-like; KEGG: nda:Ndas_1042 ABC transporter related protein YP_004583861.1 TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted; KEGG: fre:Franean1_3932 hypothetical protein YP_004583862.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583863.1 KEGG: ami:Amir_2670 hypothetical protein YP_004583865.1 KEGG: fre:Franean1_3481 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004583867.1 KEGG: mjl:Mjls_5467 O-methyltransferase domain-containing protein YP_004583869.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; PFAM: Phospholipid/glycerol acyltransferase; KEGG: gbr:Gbro_4653 HAD-superfamily hydrolase; SMART: Phospholipid/glycerol acyltransferase YP_004583870.1 KEGG: nml:Namu_0208 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal YP_004583871.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: cwo:Cwoe_0379 alpha/beta hydrolase fold protein YP_004583872.1 PFAM: Uncharacterised protein family UPF0089; KEGG: rha:RHA1_ro05649 hypothetical protein YP_004583873.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sco:SCO6966 lipase YP_004583874.1 PFAM: Protein of unknown function DUF457, transmembrane; KEGG: fra:Francci3_2133 membrane-bound metal-dependent hydrolase YP_004583875.1 KEGG: fri:FraEuI1c_1012 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004583877.1 KEGG: sen:SACE_1243 putative type III polyketide synthase; PFAM: Chalcone/stilbene synthase, C-terminal; Chalcone/stilbene synthase, N-terminal YP_004583878.1 PFAM: Cytochrome P450; KEGG: sgr:SGR_6619 cytochrome P450 YP_004583879.1 KEGG: fre:Franean1_4408 hypothetical protein YP_004583880.1 KEGG: fri:FraEuI1c_5610 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like YP_004583882.1 KEGG: fri:FraEuI1c_1295 hypothetical protein YP_004583883.1 KEGG: cwo:Cwoe_2412 hypothetical protein YP_004583884.1 KEGG: htu:Htur_4639 MOSC domain containing protein YP_004583885.1 KEGG: sgr:SGR_5184 hypothetical protein YP_004583886.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: scb:SCAB_1611 2-nitropropane dioxygenase YP_004583887.1 KEGG: cai:Caci_0532 tRNA synthetase class II (G H P and S) YP_004583888.1 KEGG: cai:Caci_0534 hypothetical protein YP_004583889.1 PFAM: Inositol monophosphatase; KEGG: bao:BAMF_0160 probable inorganic polyphosphate/ATP-NAD kinase poly(P)/ATP NAD kinase YP_004583890.1 KEGG: bay:RBAM_002040 GabT1; PFAM: Aminotransferase class-III YP_004583891.1 PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; KEGG: sco:SCO3842 dioxygenase YP_004583892.1 KEGG: sta:STHERM_c18040 hypothetical protein; PFAM: ROK; Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; Aminoglycoside phosphotransferase YP_004583893.1 KEGG: scb:SCAB_12071 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583894.1 KEGG: sgr:SGR_672 putative amidinotransferase; manually curated; PFAM: Amidinotransferase YP_004583895.1 PFAM: NB-ARC; KEGG: scb:SCAB_11971 AfsR family regulator YP_004583897.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; KEGG: fal:FRAAL3242 sensor histidine kinase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted YP_004583898.1 KEGG: fri:FraEuI1c_3099 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; SMART: Transcription regulator LuxR, C-terminal YP_004583899.1 KEGG: fre:Franean1_4833 LuxR family transcriptional regulator YP_004583900.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: fal:FRAAL0336 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal YP_004583901.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL0337 ABC transporter dipeptide permease YP_004583902.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL0338 ABC transporter oligopeptide permease YP_004583903.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fal:FRAAL0341 putative MFS transporter protein YP_004583904.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL0342 TetR family transcriptional regulator YP_004583905.1 KEGG: stp:Strop_2763 thioesterase; PFAM: Thioesterase YP_004583906.1 KEGG: fal:FRAAL0349 putative 6-methylsalicylic acid synthase; PFAM: Acyl transferase; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Phosphopantetheine-binding YP_004583907.1 KEGG: fri:FraEuI1c_3101 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583908.1 PFAM: Protein of unknown function DUF1486; KEGG: fal:FRAAL0344 hypothetical protein YP_004583909.1 KEGG: fal:FRAAL0343 hypothetical protein YP_004583910.1 KEGG: nml:Namu_2037 carboxyl transferase; PFAM: Carboxyl transferase YP_004583911.1 KEGG: fra:Francci3_4179 hypothetical protein YP_004583912.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mva:Mvan_4572 TetR family transcriptional regulator YP_004583913.1 KEGG: mmi:MMAR_2964 transmembrane transport protein; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004583914.1 TIGRFAM: Malate synthase A; KEGG: tfu:Tfu_0819 malate synthase; PFAM: Malate synthase-like, core YP_004583915.1 KEGG: tcu:Tcur_2529 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat YP_004583916.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004583917.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004583919.1 TIGRFAM: Prevent-host-death protein; KEGG: npu:Npun_F0371 prevent-host-death family protein YP_004583920.1 PFAM: PilT protein, N-terminal; KEGG: cyp:PCC8801_1428 PilT protein domain protein YP_004583922.1 KEGG: hoh:Hoch_0192 response regulator receiver domain/DnaJ domain-containing protein YP_004583923.1 PFAM: ATPase associated with various cellular activities, AAA-5; KEGG: hoh:Hoch_0193 ATPase associated with various cellular activities AAA_5 YP_004583924.1 PFAM: ATPase, AAA-type, core; KEGG: hoh:Hoch_0194 AAA ATPase central domain protein; SMART: ATPase, AAA+ type, core YP_004583925.1 KEGG: hoh:Hoch_0195 hypothetical protein YP_004583926.1 KEGG: mul:MUL_3472 NADP-dependent oxidoreductase; PFAM: Alcohol dehydrogenase, zinc-binding YP_004583927.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: fri:FraEuI1c_4679 electron transfer flavoprotein alpha/beta-subunit YP_004583928.1 KEGG: fri:FraEuI1c_4678 hypothetical protein YP_004583929.1 PFAM: FAD dependent oxidoreductase; KEGG: fri:FraEuI1c_4677 electron-transferring-flavoprotein dehydrogenase YP_004583930.1 PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: fri:FraEuI1c_4676 electron transfer flavoprotein alpha subunit YP_004583931.1 KEGG: fri:FraEuI1c_4675 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004583932.1 KEGG: fri:FraEuI1c_4674 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal YP_004583933.1 KEGG: fal:FRAAL3572 coenzyme PQQ synthesis protein E (pyrroloquinoline quinone biosynthesis protein E); PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_004583934.1 KEGG: fal:FRAAL3571 hypothetical protein YP_004583936.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; KEGG: swi:Swit_1017 TetR family transcriptional regulator YP_004583937.1 KEGG: rop:ROP_24600 fatty acid-CoA racemase; PFAM: CoA-transferase family III YP_004583938.1 KEGG: fri:FraEuI1c_3393 hypothetical protein YP_004583939.1 KEGG: fri:FraEuI1c_3393 hypothetical protein YP_004583941.1 KEGG: fre:Franean1_2954 hypothetical protein YP_004583942.1 KEGG: fre:Franean1_2953 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004583943.1 PFAM: ABC transporter-like; Bacterial inner-membrane translocator; KEGG: fre:Franean1_2952 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004583944.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583945.1 KEGG: rop:ROP_47980 putative Mce family protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related YP_004583946.1 KEGG: rha:RHA1_ro04700 MCE family protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related YP_004583947.1 KEGG: rop:ROP_48010 putative Mce family protein; TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related YP_004583948.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004583949.1 KEGG: rop:ROP_46850 hypothetical membrane protein YP_004583950.1 KEGG: rha:RHA1_ro02745 hypothetical protein YP_004583952.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583953.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004583954.1 PFAM: Limonene-1,2-epoxide hydrolase; KEGG: rop:ROP_24380 hypothetical protein YP_004583955.1 PFAM: Protein of unknown function DUF1905; KEGG: saq:Sare_0270 hypothetical protein YP_004583956.1 KEGG: fal:FRAAL3106 dehydrogenase; TIGRFAM: putative F420-dependent oxidoreductase, MSMEG_2249 family; PFAM: Luciferase-like, subgroup YP_004583958.1 KEGG: amd:AMED_5173 LuxR family transcriptional regulator fused with ATPase domain; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; ATPase, AAA+ type, core YP_004583959.1 KEGG: amd:AMED_5173 LuxR family transcriptional regulator fused with ATPase domain; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal YP_004583960.1 KEGG: fre:Franean1_4975 hypothetical protein YP_004583962.1 KEGG: nfa:nfa27940 hypothetical protein YP_004583963.1 KEGG: fre:Franean1_3496 methylisocitrate lyase; TIGRFAM: Methylisocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase YP_004583964.1 KEGG: fre:Franean1_3495 2-methylcitrate dehydratase; PFAM: MmgE/PrpD YP_004583965.1 KEGG: rpa:RPA4083 hypothetical protein YP_004583966.1 PFAM: Cytochrome c oxidase, subunit III; KEGG: mgi:Mflv_1813 cytochrome c oxidase, subunit III YP_004583968.1 KEGG: gbr:Gbro_1689 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004583969.1 PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_1793 alkanal monooxygenase YP_004583970.1 KEGG: mpd:MCP_1725 putative phenylacetate-coenzyme A ligase; PFAM: AMP-dependent synthetase/ligase YP_004583971.1 KEGG: rpd:RPD_0041 cytochrome P450; PFAM: Cytochrome P450 YP_004583972.1 PFAM: Protein of unknown function DUF35; KEGG: fri:FraEuI1c_3945 protein of unknown function DUF35 YP_004583973.1 KEGG: fri:FraEuI1c_3724 hypothetical protein YP_004583974.1 PFAM: Aminoglycoside phosphotransferase; KEGG: rop:ROP_24920 putative phosphotransferase YP_004583976.1 PFAM: Aldehyde dehydrogenase; KEGG: fri:FraEuI1c_5319 aldehyde dehydrogenase YP_004583977.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: gob:Gobs_3681 SMP-30/gluconolaconase/LRE domain-containing protein YP_004583978.1 KEGG: rha:RHA1_ro10148 sensor kinase, two-component system; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR-4; GAF; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; GAF; ATP-binding region, ATPase-like YP_004583979.1 KEGG: sth:STH3220 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal YP_004583980.1 PFAM: PilT protein, N-terminal; KEGG: cwo:Cwoe_2280 PilT protein domain protein YP_004583981.1 PFAM: Transcription regulator AbrB/SpoV, predicted; KEGG: cwo:Cwoe_2279 hypothetical protein YP_004583983.1 KEGG: fre:Franean1_3090 hypothetical protein YP_004583984.1 PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: fri:FraEuI1c_1530 filamentation induced by cAMP protein Fic YP_004583986.1 PFAM: Tellurite resistance TerB; KEGG: fre:Franean1_2430 tellurite resistance TerB YP_004583987.1 PFAM: NUDIX hydrolase domain; KEGG: fre:Franean1_2431 NUDIX hydrolase YP_004583988.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL3380 putative aminoglycoside N6'-acetyltransferase YP_004583989.1 KEGG: fra:Francci3_0217 RNA binding S1; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold YP_004583990.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004583991.1 KEGG: fre:Franean1_4607 RNA-directed DNA polymerase; manually curated; PFAM: RNA-directed DNA polymerase (reverse transcriptase) YP_004583992.1 KEGG: fre:Franean1_1420 transposase YP_004583993.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004583994.1 KEGG: sco:SCO3294 transferase YP_004583995.1 PFAM: Methyltransferase type 12; KEGG: sen:SACE_4717 methyltransferase YP_004583996.1 PFAM: Mechanosensitive ion channel MscS; KEGG: fre:Franean1_6897 MscS mechanosensitive ion channel YP_004583997.1 KEGG: fri:FraEuI1c_6473 hypothetical protein YP_004583998.1 KEGG: fre:Franean1_0643 hypothetical protein YP_004584000.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004584001.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004584002.1 KEGG: rer:RER_49620 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004584003.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rer:RER_49610 hypothetical protein YP_004584004.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL0271 putative UvrA-like protein YP_004584005.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: fre:Franean1_4105 LysR family transcriptional regulator YP_004584006.1 TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: fre:Franean1_4104 NtaA/SnaA/SoxA family monooxygenase YP_004584007.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fal:FRAAL4798 peptide ABC transporter membrane protein YP_004584008.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL4797 peptide ABC transporter membrane protein YP_004584009.1 TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: fal:FRAAL4793 NtaA/SnaA/SoxA family monooxygenase YP_004584010.1 PFAM: Luciferase-like, subgroup; KEGG: fal:FRAAL4791 putative monooxigenase YP_004584012.1 KEGG: fre:Franean1_3983 hypothetical protein YP_004584015.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004584016.1 KEGG: fre:Franean1_3525 hypothetical protein YP_004584017.1 KEGG: fri:FraEuI1c_5665 serine/threonine protein kinase; PFAM: NERD; Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain YP_004584018.1 TIGRFAM: Prevent-host-death protein; KEGG: amd:AMED_9124 hypothetical protein YP_004584019.1 PFAM: PilT protein, N-terminal; KEGG: mbt:JTY_1985 hypothetical protein YP_004584020.1 KEGG: fal:FRAAL0468 putative ATP/GTP binding protein YP_004584021.1 PFAM: Metallophosphoesterase; KEGG: fra:Francci3_1505 metallophosphoesterase YP_004584022.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: fal:FRAAL2312 putative phosphopantetheinyl transferase PptA YP_004584023.1 PFAM: FAD dependent oxidoreductase; KEGG: fre:Franean1_6664 FAD dependent oxidoreductase YP_004584024.1 KEGG: mau:Micau_3629 monooxygenase; PFAM: Monooxygenase, FAD-binding; Antibiotic biosynthesis monooxygenase YP_004584025.1 KEGG: mau:Micau_3495 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004584026.1 KEGG: mau:Micau_3496 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004584027.1 PFAM: Cupin 2, conserved barrel; KEGG: mil:ML5_4898 cupin 2 conserved barrel domain protein YP_004584028.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: mil:ML5_4897 cyclase/dehydrase YP_004584029.1 PFAM: Phosphopantetheine-binding; KEGG: mil:ML5_4897 cyclase/dehydrase YP_004584030.1 KEGG: mil:ML5_4896 carbamoyl-phosphate synthase L chain ATP-binding protein; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal YP_004584031.1 PFAM: Biotin/lipoyl attachment; KEGG: gob:Gobs_0152 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004584032.1 PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Acetyl-CoA carboxylase, alpha subunit; KEGG: stp:Strop_2505 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_004584033.1 PFAM: Polyketide synthesis cyclase; KEGG: saq:Sare_2690 polyketide synthesis cyclase YP_004584034.1 KEGG: fra:Francci3_1552 helicase RecD/TraA; TIGRFAM: DNA helicase, RecD/TraA type YP_004584035.1 PFAM: Creatininase; KEGG: nfa:nfa32090 hypothetical protein YP_004584036.1 PFAM: Glycosyl transferase, family 2; KEGG: nfa:nfa22310 putative glycosyltransferase YP_004584037.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: sen:SACE_2392 short-chain dehydrogenase/reductase SDR YP_004584038.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL4318 TetR family transcriptional regulator YP_004584040.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004584041.1 KEGG: stp:Strop_0508 hypothetical protein YP_004584043.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004584044.1 KEGG: tcu:Tcur_4372 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004584045.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: tbi:Tbis_1527 antibiotic biosynthesis monooxygenase YP_004584047.1 KEGG: fra:Francci3_2097 hypothetical protein YP_004584048.1 KEGG: fra:Francci3_4475 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004584049.1 PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: fal:FRAAL6442 protein HesA YP_004584050.1 KEGG: fre:Franean1_6870 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis YP_004584051.1 KEGG: fre:Franean1_6870 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; NIF system FeS cluster assembly, NifU, C-terminal YP_004584052.1 KEGG: fre:Franean1_6871 nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: Nitrogenase cofactor biosynthesis protein NifB; PFAM: Radical SAM; Dinitrogenase iron-molybdenum cofactor biosynthesis YP_004584053.1 PFAM: NifZ; KEGG: fal:FRAAL6804 NifZ protein YP_004584054.1 KEGG: fra:Francci3_4480 nitrogen fixation protein NifW; HAMAP: Nitrogenase-stabilizing/protective protein nifW; PFAM: Nitrogen fixation protein NifW YP_004584055.1 PFAM: Uncharacterised protein family UPF0437; KEGG: fre:Franean1_6874 hypothetical protein YP_004584056.1 KEGG: fre:Franean1_6875 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0460; PFAM: Uncharacterised protein family UPF0460 YP_004584057.1 KEGG: fre:Franean1_6876 nitrogen fixation protein NifX; TIGRFAM: Nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis YP_004584058.1 TIGRFAM: Nitrogenase molybdenum-iron cofactor biosynthesis protein; KEGG: fre:Franean1_6877 nitrogenase molybdenum-cofactor biosynthesis protein NifN; PFAM: Nitrogenase/oxidoreductase, component 1 YP_004584059.1 KEGG: fre:Franean1_6878 nitrogenase molybdenum-cofactor biosynthesis protein NifE; TIGRFAM: Nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase/oxidoreductase, component 1 YP_004584060.1 TIGRFAM: Nitrogenase molybdenum-iron protein beta chain; KEGG: fra:Francci3_4486 nitrogenase molybdenum-iron protein beta chain; PFAM: Nitrogenase/oxidoreductase, component 1 YP_004584061.1 TIGRFAM: Nitrogenase molybdenum-iron protein alpha chain; Nitrogenase component 1, alpha chain; KEGG: fra:Francci3_4487 nitrogenase molybdenum-iron protein alpha chain; PFAM: Nitrogenase/oxidoreductase, component 1 YP_004584062.1 PFAM: Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL; TIGRFAM: Nitrogenase iron protein NifH; HAMAP: Nitrogenase iron protein NifH; KEGG: fre:Franean1_6881 nitrogenase iron protein YP_004584063.1 TIGRFAM: Homocitrate synthase NifV-type; KEGG: fre:Franean1_4071 homocitrate synthase; PFAM: Pyruvate carboxyltransferase YP_004584064.1 KEGG: mil:ML5_0899 2-oxoglutarate synthase; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_004584065.1 TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: stp:Strop_0699 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YP_004584066.1 TIGRFAM: Prevent-host-death protein; KEGG: mil:ML5_0363 prevent-host-death family protein YP_004584067.1 KEGG: mil:ML5_0364 hypothetical protein YP_004584068.1 KEGG: fal:FRAL4387 hypothetical protein YP_004584069.1 TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: fre:Franean1_5133 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal YP_004584070.1 TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; KEGG: fal:FRAAL4964 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004584071.1 KEGG: fre:Franean1_1935 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal YP_004584072.1 PFAM: Prolipoprotein diacylglyceryl transferase; manually curated; TIGRFAM: Prolipoprotein diacylglyceryl transferase; KEGG: fre:Franean1_1934 prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase YP_004584073.1 PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: fra:Francci3_3015 tryptophan synthase subunit alpha YP_004584074.1 PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: fra:Francci3_3016 tryptophan synthase subunit beta YP_004584075.1 KEGG: fri:FraEuI1c_4972 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_004584076.1 PFAM: Trp biosynthesis associated, transmembrane protein, Oprn/Chp; KEGG: fal:FRAAL4971 hypothetical protein YP_004584077.1 TIGRFAM: Anthranilate synthase component I; KEGG: fal:FRAAL4972 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal YP_004584078.1 HAMAP: Phosphoribosyl-AMP cyclohydrolase; KEGG: fre:Franean1_1927 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase YP_004584079.1 KEGG: fre:Franean1_4940 putative secreted protein YP_004584080.1 manually curated; PFAM: Extracellular solute-binding protein, family 3; KEGG: fre:Franean1_4942 extracellular solute-binding protein; SMART: Extracellular solute-binding protein, family 3 YP_004584081.1 KEGG: fal:FRAAL3894 hypothetical protein YP_004584082.1 KEGG: fal:FRAAL3895 putative serine/threonine-protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR-4; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004584083.1 KEGG: fra:Francci3_2425 protein serine/threonine phosphatases; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related YP_004584084.1 KEGG: fre:Franean1_4946 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_004584086.1 KEGG: fre:Franean1_0367 FHA domain-containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated YP_004584087.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: fre:Franean1_1926 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004584088.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: fre:Franean1_1925 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004584089.1 TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: fri:FraEuI1c_4983 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis YP_004584090.1 PFAM: Histidine biosynthesis; TIGRFAM: Bifunctional HisA/TrpF; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: fra:Francci3_3023 phosphoribosyl isomerase A YP_004584091.1 PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: sro:Sros_0172 hypothetical protein YP_004584092.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fra:Francci3_2413 major facilitator transporter YP_004584093.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004584094.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004584095.1 KEGG: fal:FRAAL0257 hypothetical protein YP_004584097.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004584098.1 PFAM: Protein of unknown function DUF990; KEGG: sgr:SGR_4648 hypothetical protein YP_004584099.1 PFAM: Protein of unknown function DUF990; KEGG: tcu:Tcur_2492 hypothetical protein YP_004584100.1 PFAM: Aminoglycoside phosphotransferase; KEGG: rop:ROP_45930 putative phosphotransferase YP_004584101.1 KEGG: hne:HNE_2392 hypothetical protein YP_004584102.1 KEGG: mmi:MMAR_2876 putative regulatory protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; GAF YP_004584103.1 PFAM: Phosphoglycerate mutase; KEGG: fra:Francci3_3243 phosphoglycerate mutase YP_004584104.1 KEGG: fra:Francci3_3242 hypothetical protein YP_004584105.1 KEGG: fra:Francci3_3241 hypothetical protein YP_004584106.1 PFAM: Protein of unknown function DUF1486; KEGG: fri:FraEuI1c_2210 protein of unknown function DUF1486 YP_004584107.1 KEGG: gob:Gobs_0236 cytochrome P450; PFAM: Cytochrome P450 YP_004584108.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: fal:FRAAL4310 putative cation-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase YP_004584109.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: fre:Franean1_3941 LysR family transcriptional regulator YP_004584110.1 KEGG: fre:Franean1_3942 ferredoxin; PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region YP_004584111.1 PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: fre:Franean1_3943 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004584112.1 KEGG: fre:Franean1_3944 extracellular solute-binding protein; manually curated; PFAM: Bacterial extracellular solute-binding, family 1 YP_004584113.1 PFAM: Metallophosphoesterase; KEGG: fal:FRAAL4367 putative cAMP phosphodiesterase YP_004584114.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fre:Franean1_3945 binding-protein-dependent transport systems inner membrane component YP_004584115.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004584116.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fre:Franean1_3946 binding-protein-dependent transport systems inner membrane component YP_004584117.1 KEGG: fra:Francci3_2536 putative serine/threonine kinase anti-sigma factor YP_004584118.1 PFAM: Transposase, IS204/IS1001/IS1096/IS1165; KEGG: transposase IS204/IS1001/IS1096/IS1165 family protein YP_004584121.1 KEGG: fri:FraEuI1c_2626 cytochrome P450; PFAM: Cytochrome P450 YP_004584122.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004584124.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; KEGG: fre:Franean1_4738 alcohol dehydrogenase YP_004584125.1 PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: fra:Francci3_3269 peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_004584126.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_3270 GCN5-related N-acetyltransferase YP_004584127.1 KEGG: fra:Francci3_3271 hypothetical protein YP_004584128.1 KEGG: fra:Francci3_3272 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004584129.1 KEGG: fra:Francci3_3273 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); Cupin 2, conserved barrel YP_004584130.1 PFAM: FAD dependent oxidoreductase; KEGG: fra:Francci3_3274 FAD dependent oxidoreductase YP_004584131.1 KEGG: fra:Francci3_3275 L-lysine 6-monooxygenase (NADPH) YP_004584132.1 KEGG: fra:Francci3_3276 acyl-CoA dehydrogenase-like protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal YP_004584133.1 KEGG: fra:Francci3_3277 hypothetical protein YP_004584134.1 PFAM: Lipase, GDSL; KEGG: fra:Francci3_3278 hypothetical protein YP_004584135.1 KEGG: fra:Francci3_3279 hypothetical protein YP_004584136.1 KEGG: fra:Francci3_3280 transglutaminase-like protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like YP_004584137.1 KEGG: fra:Francci3_3281 hypothetical protein YP_004584138.1 KEGG: fra:Francci3_3282 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004584139.1 KEGG: fre:Franean1_3949 carbamoyl-phosphate synthase L chain ATP-binding; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal YP_004584140.1 KEGG: fal:FRAAL3197 biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment YP_004584141.1 PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Acetyl-CoA carboxylase, alpha subunit; KEGG: fre:Franean1_3951 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_004584142.1 KEGG: fre:Franean1_3952 PfaD family protein; TIGRFAM: PfaD family protein; PFAM: 2-nitropropane dioxygenase, NPD YP_004584143.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: fre:Franean1_3953 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004584144.1 TIGRFAM: Polyketide-type polyunsaturated fatty acid synthase, PfaA; KEGG: fre:Franean1_3954 erythronolide synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; Polyketide synthase, KR YP_004584145.1 PFAM: Lipase, GDSL; KEGG: fre:Franean1_3955 GDSL family lipase YP_004584146.1 TIGRFAM: Phenylacetic acid degradation-related protein; KEGG: fre:Franean1_3957 hypothetical protein YP_004584147.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004584148.1 KEGG: fre:Franean1_3958 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal YP_004584149.1 PFAM: Monooxygenase, FAD-binding; KEGG: fre:Franean1_3959 monooxygenase FAD-binding YP_004584150.1 KEGG: fal:FRAAL3190 putative acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase); PFAM: AMP-dependent synthetase/ligase YP_004584151.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bgf:BC1003_5394 drug resistance transporter EmrB/QacA subfamily YP_004584152.1 PFAM: Protein of unknown function DUF1778; KEGG: msp:Mspyr1_00440 hypothetical protein YP_004584153.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mbt:JTY_0941 hypothetical protein YP_004584154.1 KEGG: fre:Franean1_3939 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily YP_004584155.1 KEGG: fre:Franean1_3961 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase YP_004584156.1 KEGG: fre:Franean1_3962 beta-lactamase domain-containing protein YP_004584157.1 KEGG: fra:Francci3_1929 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004584158.1 KEGG: fal:FRAAL3183 ferritin/ribonucleotide reductase-like protein YP_004584159.1 PFAM: Phosphopantetheine-binding; KEGG: fri:FraEuI1c_2630 phosphopantetheine-binding protein YP_004584160.1 KEGG: fal:FRAAL3187 putative acyl-[acyl-carrier protein] desaturase YP_004584162.1 KEGG: fri:FraEuI1c_1282 hypothetical protein YP_004584163.1 KEGG: cwo:Cwoe_5432 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004584165.1 KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA YP_004584167.1 KEGG: fri:FraEuI1c_0522 integral membrane protein YP_004584168.1 TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-3; PAS fold-4; GAF; KEGG: fri:FraEuI1c_5575 putative PAS/PAC sensor protein; SMART: Protein phosphatase 2C-related; PAC motif; PAS; GAF YP_004584169.1 KEGG: fre:Franean1_2380 hypothetical protein YP_004584170.1 PFAM: Protein of unknown function DUF445, transmembrane; KEGG: fre:Franean1_2381 hypothetical protein YP_004584171.1 manually curated; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: fri:FraEuI1c_2449 DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004584173.1 PFAM: Protein of unknown function DUF820; KEGG: mau:Micau_5564 hypothetical protein YP_004584174.1 TIGRFAM: L-lysine 6-transaminase; KEGG: fra:Francci3_2873 L-lysine aminotransferase; PFAM: Aminotransferase class-III YP_004584175.1 KEGG: fra:Francci3_2874 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004584176.1 KEGG: sen:SACE_6976 short chain dehydrogenase/reductase family oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004584177.1 KEGG: gob:Gobs_3729 death-on-curing family protein; TIGRFAM: Death-on-curing protein; PFAM: Filamentation induced by cAMP/death on curing, related YP_004584178.1 PFAM: CopG-like DNA-binding; KEGG: gob:Gobs_3730 CopG domain-containing protein DNA-binding domain-containing protein YP_004584179.1 KEGG: scb:SCAB_13191 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004584180.1 KEGG: mbt:JTY_2613 hypothetical protein YP_004584181.1 KEGG: fal:FRAAL3675 hypothetical protein YP_004584182.1 KEGG: fre:Franean1_2357 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR YP_004584183.1 KEGG: fal:FRAAL3998 dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding YP_004584184.1 PFAM: PilT protein, N-terminal; KEGG: fra:Francci3_2877 PilT protein-like protein YP_004584185.1 TIGRFAM: Prevent-host-death protein YP_004584186.1 PFAM: Sulphatase-modifying factor; KEGG: fra:Francci3_2311 hypothetical protein YP_004584187.1 KEGG: mau:Micau_0342 putative ATP/GTP binding protein YP_004584188.1 PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: sro:Sros_3247 hypothetical protein YP_004584191.1 TIGRFAM: Prevent-host-death protein; KEGG: fra:Francci3_4337 prevent-host-death protein YP_004584192.1 PFAM: PilT protein, N-terminal; KEGG: fra:Francci3_4336 PilT protein-like protein YP_004584193.1 KEGG: fri:FraEuI1c_2426 hypothetical protein YP_004584194.1 KEGG: sro:Sros_3361 NmrA family protein YP_004584195.1 KEGG: sma:SAV_659 AraC family transcription regulator; PFAM: ThiJ/PfpI; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004584196.1 PFAM: YcfA-like; KEGG: YcfA family protein YP_004584197.1 KEGG: fre:Franean1_2331 hypothetical protein YP_004584198.1 KEGG: fri:FraEuI1c_2405 DNA polymerase beta domain protein region YP_004584199.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004584200.1 PFAM: PilT protein, N-terminal; KEGG: sro:Sros_3094 PilT protein domain protein YP_004584201.1 KEGG: fal:FRAAL4818 hypothetical protein YP_004584202.1 KEGG: fre:Franean1_2324 hypothetical protein YP_004584204.1 KEGG: zma:100501738 hypothetical protein LOC100501738 YP_004584205.1 PFAM: Protein of unknown function DUF124; KEGG: fal:FRAAL4475 hypothetical protein YP_004584206.1 PFAM: Protein of unknown function DUF124; KEGG: fre:Franean1_2310 hypothetical protein YP_004584207.1 PFAM: Protein of unknown function DUF124; Bacterial stress protein; KEGG: fre:Franean1_2309 hypothetical protein YP_004584209.1 PFAM: Aldo/keto reductase; KEGG: fre:Franean1_2308 aldo/keto reductase YP_004584210.1 KEGG: fre:Franean1_2307 hypothetical protein YP_004584211.1 KEGG: fri:FraEuI1c_4771 formate dehydrogenase family accessory protein FdhD; HAMAP: Protein fdhD; PFAM: Formate dehydrogenase, subunit FdhD YP_004584212.1 PFAM: Sporulation stage 0, protein M; KEGG: fre:Franean1_2305 SpoOM family protein YP_004584213.1 KEGG: fri:FraEuI1c_7184 hypothetical protein YP_004584214.1 PFAM: Serine/threonine-protein kinase-like domain; NHL repeat; KEGG: fre:Franean1_4089 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004584215.1 KEGG: ttr:Tter_2698 glycoside hydrolase family 5 YP_004584216.1 KEGG: tvo:TVN1381 membrane glycosyltransferase YP_004584217.1 KEGG: hoh:Hoch_3462 hypothetical protein YP_004584218.1 KEGG: lxx:Lxx01930 acetyltransferase YP_004584219.1 PFAM: Serine/threonine-protein kinase-like domain; Twin-arginine translocation pathway, signal sequence, subgroup; Pyrrolo-quinoline quinone repeat; KEGG: fri:FraEuI1c_4608 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; Pyrrolo-quinoline quinone beta-propeller repeat YP_004584220.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mau:Micau_1726 glyoxalase/bleomycin resistance protein/dioxygenase YP_004584221.1 TIGRFAM: Carboxylate-amine ligase, predicted; HAMAP: Carboxylate-amine ligase ybdK; KEGG: fre:Franean1_2292 hypothetical protein; PFAM: Glutamate--cysteine ligase, GCS2 YP_004584222.1 KEGG: fre:Franean1_0013 OsmC family protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein YP_004584223.1 KEGG: fri:FraEuI1c_4785 regulatory protein GntR HTH; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004584224.1 KEGG: sma:SAV_5281 acyl-CoA thioesterase; PFAM: Acyl-CoA thioesterase YP_004584225.1 PFAM: ATPase, K+ transporting, A subunit; TIGRFAM: ATPase, K+ transporting, A subunit; HAMAP: ATPase, K+ transporting, A subunit; KEGG: fri:FraEuI1c_3046 potassium-transporting ATPase, A subunit YP_004584226.1 PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: fra:Francci3_3286 potassium-transporting ATPase subunit B YP_004584227.1 KEGG: fri:FraEuI1c_3048 K transporting ATPase KdpC subunit; HAMAP: Potassium transporting ATPase, C subunit; PFAM: Potassium transporting ATPase, C subunit YP_004584229.1 KEGG: fra:Francci3_3284 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004584230.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ccs:CCNA_03222 ring hydroxylating dioxygenase subunit alpha YP_004584231.1 PFAM: Ferredoxin soy-like; KEGG: ami:Amir_3693 protein of unknown function DUF1271 YP_004584232.1 KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004584233.1 KEGG: sti:Sthe_3003 formyl-CoA transferase; PFAM: CoA-transferase family III YP_004584234.1 KEGG: bsb:Bresu_2028 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004584235.1 KEGG: sen:SACE_4511 ferredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004584236.1 PFAM: Nuclear transport factor 2; KEGG: amd:AMED_7146 hypothetical protein YP_004584237.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bts:Btus_1236 transcriptional regulator, TetR family YP_004584238.1 KEGG: sna:Snas_6162 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004584239.1 KEGG: mav:MAV_4933 hypothetical protein YP_004584240.1 PFAM: Amidohydrolase 2; Protein of unknown function DUF59; KEGG: mxa:MXAN_0094 amidohydrolase family protein YP_004584241.1 PFAM: Crotonase, core; KEGG: gvi:gll2549 6-oxocamphor hydrolase YP_004584242.1 PFAM: MaoC-like dehydratase; KEGG: afu:AF0198 monoamine oxidase regulatory protein, putative YP_004584243.1 KEGG: dal:Dalk_3387 acetyl-CoA acetyltransferase-like protein YP_004584244.1 PFAM: Protein of unknown function DUF35; KEGG: dal:Dalk_3386 protein of unknown function DUF35 YP_004584245.1 KEGG: bts:Btus_1990 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal YP_004584246.1 PFAM: Crotonase, core; KEGG: chy:CHY_1601 3-hydroxybutyryl-CoA dehydratase YP_004584247.1 KEGG: fal:FRAAL5304 sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004584248.1 KEGG: fre:Franean1_2287 hypothetical protein YP_004584249.1 KEGG: nfa:nfa6810 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Cobalt transport protein; SMART: ATPase, AAA+ type, core YP_004584250.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; KEGG: fri:FraEuI1c_4795 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS YP_004584251.1 KEGG: fra:Francci3_2818 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein YP_004584252.1 KEGG: fre:Franean1_2249 BFD/(2Fe-2S)-binding domain-containing protein; manually curated; PFAM: BFD-like [2Fe-2S]-binding region YP_004584253.1 KEGG: fre:Franean1_0115 hypothetical protein YP_004584254.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: fal:FRAAL4505 hypothetical protein YP_004584255.1 KEGG: fre:Franean1_2245 hypothetical protein YP_004584256.1 KEGG: fra:Francci3_1607 delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase, type 1 YP_004584257.1 PFAM: Phosphopantetheine-binding; KEGG: fra:Francci3_1606 phosphopantetheine-binding YP_004584258.1 KEGG: fra:Francci3_1605 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004584259.1 KEGG: fra:Francci3_1604 cytochrome P450; PFAM: Cytochrome P450 YP_004584260.1 KEGG: fra:Francci3_1602 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004584261.1 KEGG: fre:Franean1_1902 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily YP_004584262.1 KEGG: fre:Franean1_1901 cytochrome P450; PFAM: Cytochrome P450 YP_004584263.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fre:Franean1_1900 alpha/beta hydrolase fold YP_004584265.1 PFAM: Transcriptional regulator PadR N-terminal-like; KEGG: cai:Caci_5790 transcriptional regulator, PadR-like family YP_004584266.1 KEGG: fre:Franean1_5068 hypothetical protein YP_004584268.1 PFAM: Phosphoglycerate mutase; Ribonuclease H; KEGG: fal:FRAAL2221 bifunctional RNase H/acid phosphatase YP_004584269.1 PFAM: Protein of unknown function DUF164; KEGG: fre:Franean1_5075 hypothetical protein YP_004584270.1 KEGG: fal:FRAAL2219 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3 YP_004584272.1 KEGG: fri:FraEuI1c_3527 hypothetical protein YP_004584273.1 KEGG: fal:FRAAL2217 hypothetical protein YP_004584274.1 KEGG: fal:FRAAL2216 hypothetical protein YP_004584275.1 KEGG: fre:Franean1_5081 hypothetical protein YP_004584276.1 PFAM: ABC-2 type transporter; KEGG: fre:Franean1_5082 ABC-2 type transporter YP_004584277.1 KEGG: fre:Franean1_5083 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004584278.1 PFAM: Glycosyl transferase, family 2; KEGG: sna:Snas_4853 glycosyl transferase family 2 YP_004584279.1 PFAM: Amidohydrolase 1; KEGG: rop:ROP_32990 putative hydrolase YP_004584280.1 KEGG: fre:Franean1_5084 hypothetical protein YP_004584281.1 PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; NB-ARC; KEGG: amd:AMED_6389 SARP family transcriptional regulator YP_004584282.1 PFAM: Protein of unknown function DUF1486; KEGG: msv:Mesil_2545 protein of unknown function DUF1486 YP_004584283.1 KEGG: bha:BH1848 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal YP_004584284.1 KEGG: bid:Bind_3017 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YP_004584285.1 KEGG: tcu:Tcur_0216 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal YP_004584286.1 KEGG: 3-oxoacyl-(acyl-carrier-protein) synthase II; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal YP_004584287.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: gct:GC56T3_3317 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_004584288.1 KEGG: 3-oxoacyl-(acyl-carrier-protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004584289.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: mta:Moth_0217 (3R)-hydroxymyristoyl-ACP dehydratase YP_004584290.1 KEGG: syx:SynWH7803_1861 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004584291.1 PFAM: Phosphopantetheine-binding; KEGG: plm:Plim_3122 phosphopantetheine-binding protein YP_004584292.1 TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: mta:Moth_0947 [acyl-carrier-protein] S-malonyltransferase; PFAM: Acyl transferase YP_004584293.1 KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20 YP_004584294.1 KEGG: scb:SCAB_26791 carboxyl transferase; PFAM: Carboxyl transferase YP_004584295.1 KEGG: fra:Francci3_3888 hypothetical protein YP_004584296.1 KEGG: fre:Franean1_5085 hypothetical protein YP_004584297.1 TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: fre:Franean1_5086 RluA family pseudouridine synthase; SMART: RNA-binding S4 YP_004584298.1 KEGG: fal:FRAAL2208 lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; PFAM: Peptidase A8, signal peptidase II YP_004584299.1 TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: fre:Franean1_5088 isoleucyl-tRNA synthetase YP_004584300.1 KEGG: fri:FraEuI1c_2382 hypothetical protein YP_004584302.1 KEGG: fra:Francci3_1423 hypothetical protein; TIGRFAM: DivIVA domain; PFAM: DivIVA YP_004584303.1 PFAM: Protein of unknown function YGGT; KEGG: fra:Francci3_1422 hypothetical protein YP_004584304.1 KEGG: fal:FRAAL2203 hypothetical protein; HAMAP: Cell division protein sepF; PFAM: Cell division protein SepF YP_004584305.1 PFAM: Alanine racemase, N-terminal; KEGG: fri:FraEuI1c_2378 alanine racemase domain protein YP_004584307.1 KEGG: fra:Francci3_1418 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain YP_004584308.1 SMART: ATPase, AAA+ type, core; Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sus:Acid_5780 serine/threonine protein kinase YP_004584309.1 KEGG: cvi:CV_2218 hypothetical protein YP_004584310.1 PFAM: PemK-like protein; KEGG: fra:Francci3_2335 transcriptional modulator of MazE/toxin, MazF YP_004584311.1 KEGG: fri:FraEuI1c_4861 hypothetical protein YP_004584312.1 KEGG: fri:FraEuI1c_1345 FHA domain containing protein; PFAM: Cell divisionFtsK/SpoIIIE; Forkhead-associated; SMART: Forkhead-associated; ATPase, AAA+ type, core YP_004584313.1 KEGG: sro:Sros_2329 hypothetical protein YP_004584314.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004584315.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004584316.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004584317.1 PFAM: Polysaccharide deacetylase; KEGG: mno:Mnod_4026 polysaccharide deacetylase YP_004584318.1 KEGG: rhi:NGR_a03430 N-acetylglucosaminyltransferase nodulation protein NodC; involved in nodulation factor synthesis; PFAM: Glycosyl transferase, family 2 YP_004584319.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: kse:Ksed_07240 daunorubicin resistance ABC transporter ATP-binding subunit; PFAM: ABC transporter-like YP_004584320.1 PFAM: ABC-2 type transporter; KEGG: kfl:Kfla_5617 ABC-2 type transporter YP_004584321.1 KEGG: fre:Franean1_1420 transposase YP_004584322.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004584324.1 KEGG: fri:FraEuI1c_1347 YD repeat-containing protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: YD repeat YP_004584325.1 KEGG: fri:FraEuI1c_1348 protein of unknown function DUF909 YP_004584326.1 KEGG: fri:FraEuI1c_1349 hypothetical protein YP_004584327.1 KEGG: fri:FraEuI1c_1350 putative repetitive surface protein YP_004584328.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: fre:Franean1_0642 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004584329.1 KEGG: amd:AMED_9187 hypothetical protein YP_004584330.1 TIGRFAM: Prevent-host-death protein YP_004584331.1 PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: fra:Francci3_1417 UDP-N-acetylmuramate--L-alanine ligase YP_004584332.1 PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: gob:Gobs_3262 UDP-N-acetylmuramate/alanine ligase YP_004584333.1 TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: fal:FRAAL2196 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28 YP_004584334.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cak:Caul_2660 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004584335.1 KEGG: fri:FraEuI1c_2373 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein YP_004584336.1 KEGG: fri:FraEuI1c_5630 FAD linked oxidase domain protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal YP_004584337.1 KEGG: mau:Micau_4217 hypothetical protein YP_004584338.1 KEGG: hau:Haur_1551 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase YP_004584339.1 KEGG: hypothetical protein YP_004584340.1 KEGG: stp:Strop_3005 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; PFAM: Mur ligase, central; Mur ligase, C-terminal YP_004584341.1 KEGG: sco:SCO5280 ATP-binding protein YP_004584343.1 KEGG: cai:Caci_6581 hypothetical protein YP_004584344.1 TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: fre:Franean1_5101 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004584345.1 TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; KEGG: fal:FRAAL2192 D-alanine:D-alanine-adding enzyme; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal YP_004584346.1 PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: fre:Franean1_5103 UDP-N-acetylmuramyl-tripeptide synthetase YP_004584347.1 KEGG: fra:Francci3_1409 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain YP_004584348.1 KEGG: fal:FRAAL2189 hypothetical protein YP_004584349.1 TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: fre:Franean1_5106 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW YP_004584350.1 TIGRFAM: MraZ; HAMAP: MraZ; KEGG: fre:Franean1_5107 cell division protein MraZ; PFAM: MraZ domain YP_004584351.1 PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: fri:FraEuI1c_2364 ATPase associated with various cellular activities AAA_3 YP_004584352.1 PFAM: Protein of unknown function DUF58; KEGG: fra:Francci3_1404 hypothetical protein YP_004584353.1 KEGG: fal:FRAAL2184 transglutaminase-like domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like YP_004584354.1 KEGG: fre:Franean1_5111 hypothetical protein YP_004584355.1 PFAM: Methyltransferase type 12; KEGG: fra:Francci3_1401 methyltransferase type 11 YP_004584357.1 KEGG: fri:FraEuI1c_2355 hypothetical protein YP_004584358.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fri:FraEuI1c_2353 GCN5-related N-acetyltransferase YP_004584359.1 KEGG: fri:FraEuI1c_2348 hypothetical protein YP_004584360.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: fre:Franean1_5126 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase YP_004584361.1 KEGG: fal:FRAAL2162 hypothetical protein YP_004584362.1 PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: fre:Franean1_5129 ATPase YP_004584363.1 KEGG: fal:FRAAL2158 hypothetical protein YP_004584364.1 KEGG: fre:Franean1_5131 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_004584365.1 KEGG: stp:Strop_0628 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004584366.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: fri:FraEuI1c_7022 molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Transport-associated OB, type 1 YP_004584367.1 KEGG: fri:FraEuI1c_7021 molybdate ABC transporter, inner membrane subunit; TIGRFAM: Molybdate ABC transporter, permease protein; NifC-like ABC-type porter; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004584368.1 KEGG: fri:FraEuI1c_7019 DNA binding domain protein, excisionase family; TIGRFAM: Molybdenum-pterin binding; Excisionase/Xis, DNA-binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, MerR YP_004584369.1 PFAM: Thiamine monophosphate synthase; TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: fre:Franean1_1842 thiamine-phosphate pyrophosphorylase YP_004584370.1 KEGG: fra:Francci3_3072 putative transcriptional regulatory protein YP_004584371.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: fre:Franean1_1839 oxidoreductase domain-containing protein YP_004584372.1 KEGG: gob:Gobs_4993 putative thiol-disulphide oxidoreductase DCC YP_004584373.1 KEGG: fre:Franean1_1835 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; PASTA; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA YP_004584374.1 KEGG: fal:FRAAL5082 hypothetical protein YP_004584375.1 TIGRFAM: DAHP synthetase, class II; KEGG: fra:Francci3_3084 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; PFAM: DAHP synthetase, class II YP_004584376.1 TIGRFAM: Phosphofructokinase, pyrophosphate dependent; HAMAP: 6-phosphofructokinase; KEGG: fre:Franean1_1832 6-phosphofructokinase; PFAM: Phosphofructokinase YP_004584377.1 KEGG: fal:FRAAL5085 hypothetical protein YP_004584378.1 KEGG: fra:Francci3_3087 hypothetical protein YP_004584379.1 KEGG: fre:Franean1_1829 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004584380.1 KEGG: fra:Francci3_3089 putative esterase/lipase YP_004584381.1 KEGG: fal:FRAAL5089 hypothetical protein YP_004584382.1 PFAM: LOR/SDH bifunctional enzyme conserved region; KEGG: fal:FRAAL5090 hypothetical protein YP_004584383.1 TIGRFAM: Glucokinase ROK; KEGG: fre:Franean1_1825 ROK family glucokinase; PFAM: ROK YP_004584384.1 KEGG: bcg:BCG9842_B0387 VrrB protein YP_004584385.1 KEGG: fri:FraEuI1c_1810 arsenite-transporting ATPase; PFAM: ATPase, anion-transporting YP_004584386.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: fri:FraEuI1c_1811 polyketide cyclase/dehydrase YP_004584387.1 PFAM: Metallophosphoesterase; KEGG: fal:FRAAL5097 putative phosphoesterase YP_004584388.1 KEGG: amd:AMED_2446 hypothetical protein YP_004584389.1 PFAM: Glycosyl transferase, group 1; KEGG: fre:Franean1_1819 glycosyl transferase group 1 YP_004584390.1 KEGG: fri:FraEuI1c_1806 hypothetical protein YP_004584391.1 KEGG: fri:FraEuI1c_1805 hypothetical protein YP_004584392.1 PFAM: Protein of unknown function DUF820; KEGG: fre:Franean1_6498 hypothetical protein YP_004584393.1 KEGG: fal:FRAAL4818 hypothetical protein YP_004584394.1 PFAM: PilT protein, N-terminal; KEGG: fal:FRAAL4817 hypothetical protein YP_004584395.1 KEGG: app:CAP2UW1_0881 type III restriction protein res subunit YP_004584397.1 KEGG: fal:FRAAL0557 hypothetical protein YP_004584399.1 KEGG: tcu:Tcur_3620 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004584400.1 PFAM: Protein of unknown function DUF2137; KEGG: sro:Sros_0888 hypothetical protein YP_004584401.1 PFAM: Protein of unknown function DUF901; KEGG: fre:Franean1_1817 hypothetical protein YP_004584402.1 PFAM: Histidine triad (HIT) protein; KEGG: fre:Franean1_1815 histidine triad (HIT) protein YP_004584403.1 KEGG: fra:Francci3_3103 glyoxalase/bleomycin resistance protein/dioxygenase YP_004584404.1 SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: fre:Franean1_1813 hypothetical protein; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal YP_004584405.1 PFAM: ABC-2 type transporter; KEGG: amd:AMED_3028 ABC-2 type transporter YP_004584406.1 PFAM: ABC transporter-like; KEGG: rop:ROP_48820 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004584407.1 PFAM: Cytochrome b/b6, N-terminal; KEGG: fal:FRAAL5109 ubiquinol-cytochrome c reductase cytochrome b subunit YP_004584408.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: fra:Francci3_3106 Rieske (2Fe-2S) protein YP_004584409.1 PFAM: Cytochrome c, class I; KEGG: fra:Francci3_3107 cytochrome c, class I YP_004584410.1 KEGG: fra:Francci3_3108 heme/copper-type cytochrome/quinol oxidase subunit 3-like protein; PFAM: Cytochrome c oxidase, subunit III YP_004584411.1 KEGG: kfl:Kfla_2790 membrane protein-like protein; manually curated; PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related YP_004584412.1 KEGG: fre:Franean1_1808 hypothetical protein YP_004584413.1 PFAM: Rubrerythrin; KEGG: fal:FRAAL5116 rubrerythrin (rr) YP_004584414.1 PFAM: Ferric-uptake regulator; KEGG: fri:FraEuI1c_1793 ferric uptake regulator, Fur family YP_004584415.1 KEGG: fri:FraEuI1c_1794 response regulator receiver YP_004584416.1 PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: fra:Francci3_3114 anthranilate phosphoribosyltransferase YP_004584417.1 KEGG: fra:Francci3_3115 putative integral membrane protein YP_004584418.1 KEGG: fal:FRAAL5122 cytochrome c oxidase polypeptide I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I YP_004584419.1 KEGG: fra:Francci3_3117 cytochrome c oxidase subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal YP_004584420.1 PFAM: PilT protein, N-terminal; KEGG: fri:FraEuI1c_1627 PilT protein domain protein YP_004584421.1 TIGRFAM: Prevent-host-death protein; KEGG: fri:FraEuI1c_1626 prevent-host-death family protein YP_004584422.1 KEGG: fal:FRAAL5124 cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004584423.1 PFAM: SirA-like; KEGG: fal:FRAAL5125 putative aminotransferase (partial) YP_004584424.1 KEGG: fri:FraEuI1c_1784 PfkB domain protein; PFAM: Carbohydrate/purine kinase YP_004584425.1 KEGG: fri:FraEuI1c_1783 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis YP_004584426.1 PFAM: Quinolinate synthetase A; TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A; KEGG: fre:Franean1_1796 quinolinate synthetase YP_004584427.1 KEGG: fre:Franean1_1795 hypothetical protein YP_004584428.1 PFAM: Aldo/keto reductase; KEGG: fra:Francci3_3124 aldo/keto reductase YP_004584429.1 KEGG: fal:FRAAL5135 hypothetical protein YP_004584430.1 KEGG: fra:Francci3_3128 hypothetical protein YP_004584431.1 KEGG: fal:FRAAL5138 bifunctional cobalamin biosynthesis protein CobU; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase YP_004584432.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: fra:Francci3_2714 tRNA-adenosine deaminase YP_004584433.1 KEGG: fri:FraEuI1c_3116 luciferase-like, subgroup YP_004584434.1 TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: fal:FRAAL4452 putative FMNH2-utilizing monooxygenase YP_004584435.1 KEGG: cms:CMS_2155 putative DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004584436.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_1977 short chain dehydrogenase/reductase family oxidoreductase YP_004584438.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tcu:Tcur_0293 TetR family transcriptional regulator YP_004584439.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mau:Micau_3561 alpha/beta hydrolase fold protein YP_004584440.1 KEGG: fri:FraEuI1c_6021 hypothetical protein YP_004584441.1 PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like, core; TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; HAMAP: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; KEGG: fre:Franean1_1785 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_004584442.1 KEGG: fra:Francci3_3131 cobalamin-5'-phosphate synthase; HAMAP: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase YP_004584443.1 TIGRFAM: Glycine cleavage system T protein; KEGG: fre:Franean1_1782 glycine cleavage system aminomethyltransferase T; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel YP_004584444.1 KEGG: fre:Franean1_1781 leucyl aminopeptidase; HAMAP: cytosol aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal YP_004584445.1 TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: fal:FRAAL5151 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_004584446.1 PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; manually curated; KEGG: fri:FraEuI1c_1768 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component YP_004584447.1 PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: fal:FRAAL5153 NAD dependent epimerase/dehydratase family protein YP_004584448.1 SMART: Serine/threonine-protein kinase domain; KEGG: fal:FRAAL5154 hypothetical protein YP_004584449.1 PFAM: Peptidase S51, dipeptidase E; KEGG: fre:Franean1_1776 peptidase S51 dipeptidase E YP_004584450.1 PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: fri:FraEuI1c_1755 lipoate-protein ligase B YP_004584451.1 KEGG: stp:Strop_3328 lipoyl synthase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB YP_004584452.1 KEGG: fra:Francci3_3139 hypothetical protein YP_004584453.1 KEGG: fal:FRAAL5159 putative integral membrane protein YP_004584454.1 KEGG: fre:Franean1_6594 pyridoxamine 5'-phosphate oxidase-related FMN-binding; TIGRFAM: F420-binding domain, putative; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004584455.1 PFAM: RDD; KEGG: fra:Francci3_3141 RDD YP_004584456.1 TIGRFAM: Glutamine synthetase type I; KEGG: fre:Franean1_1770 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp YP_004584457.1 KEGG: fra:Francci3_3143 L-glutamine synthetase; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp YP_004584458.1 HAMAP: Glutamate-ammonia-ligase adenylyltransferase; KEGG: fra:Francci3_3144 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YP_004584459.1 KEGG: fra:Francci3_1596 hypothetical protein YP_004584461.1 KEGG: fre:Franean1_1766 glutamine synthetase catalytic region; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp YP_004584462.1 TIGRFAM: NAD+ synthase; KEGG: fre:Franean1_1765 NAD+ synthetase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004584463.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL5169 TetR family transcriptional regulator YP_004584464.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: fre:Franean1_1762 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004584465.1 manually curated; KEGG: mil:ML5_0424 hypothetical protein YP_004584466.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004584467.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004584468.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004584469.1 KEGG: fra:Francci3_3150 hypothetical protein YP_004584470.1 KEGG: fre:Franean1_1760 NADPH-dependent F420 reductase; TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent YP_004584471.1 KEGG: fal:FRAAL5174 hypothetical protein YP_004584472.1 TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: fra:Francci3_3153 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage YP_004584473.1 KEGG: fri:FraEuI1c_1734 hypothetical protein YP_004584474.1 PFAM: PKD; KEGG: fra:Francci3_3155 hypothetical protein YP_004584475.1 PFAM: NUDIX hydrolase domain; KEGG: fri:FraEuI1c_1732 NUDIX hydrolase YP_004584476.1 PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: fra:Francci3_3157 CTP synthetase YP_004584477.1 PFAM: Nitroreductase-like; KEGG: tcu:Tcur_1868 nitroreductase YP_004584479.1 KEGG: fre:Franean1_1753 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal YP_004584480.1 KEGG: fre:Franean1_1752 inorganic polyphosphate/ATP-NAD kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase YP_004584481.1 TIGRFAM: Haemolysin A; PFAM: RNA-binding S4; Ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: fra:Francci3_3160 hemolysin A; SMART: RNA-binding S4 YP_004584482.1 KEGG: fri:FraEuI1c_1727 putative translation initiation/elongation factor YP_004584483.1 KEGG: fal:FRAAL5185 hypothetical protein YP_004584484.1 KEGG: fra:Francci3_3163 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase YP_004584485.1 KEGG: fre:Franean1_1748 tetratricopeptide domain-containing protein YP_004584486.1 PFAM: Uncharacterised conserved protein UCP033563; KEGG: fri:FraEuI1c_1723 uncharacterized conserved protein UCP033563 YP_004584488.1 KEGG: fri:FraEuI1c_1868 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004584489.1 PFAM: Helix-turn-helix, HxlR type; KEGG: fri:FraEuI1c_1867 transcriptional regulator, HxlR family YP_004584490.1 PFAM: Helix-turn-helix, HxlR type; KEGG: fre:Franean1_6637 HxlR family transcriptional regulator YP_004584491.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: fre:Franean1_6638 NADP oxidoreductase coenzyme F420-dependent YP_004584492.1 KEGG: fal:FRAAL5190 hypothetical protein YP_004584493.1 KEGG: sgr:SGR_2070 hypothetical protein YP_004584494.1 TIGRFAM: Methylpurine-DNA glycosylase (MPG); HAMAP: 3-methyladenine DNA glycosylase; KEGG: fal:FRAAL5200 3-methyladenine DNA glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG) YP_004584495.1 PFAM: Fumarate lyase; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: fal:FRAAL5201 argininosuccinate lyase YP_004584496.1 PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: fre:Franean1_1743 argininosuccinate synthase YP_004584497.1 TIGRFAM: Arginine repressor; HAMAP: Arginine repressor; KEGG: fal:FRAAL5203 arginine repressor (partial match); PFAM: Arginine repressor YP_004584498.1 PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: fal:FRAAL5204 ornithine carbamoyltransferase YP_004584500.1 PFAM: Aminotransferase class-III; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: fre:Franean1_1740 acetylornithine aminotransferase YP_004584501.1 TIGRFAM: Acetylglutamate kinase; KEGG: fri:FraEuI1c_1714 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase YP_004584502.1 PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: fri:FraEuI1c_1713 arginine biosynthesis bifunctional protein ArgJ YP_004584503.1 PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: fal:FRAAL5208 N-acetyl-gamma-glutamyl-phosphate reductase YP_004584505.1 KEGG: fre:Franean1_1869 WD-40 repeat-containing serine/threonin protein kinase; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat YP_004584507.1 KEGG: fre:Franean1_1736 hypothetical protein YP_004584508.1 PFAM: Protein of unknown function DUF692; KEGG: fre:Franean1_1735 hypothetical protein YP_004584509.1 KEGG: fal:FRAAL3634 hypothetical protein YP_004584510.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: fre:Franean1_1734 phenylalanyl-tRNA synthetase subunit beta YP_004584511.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: fre:Franean1_1733 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal YP_004584512.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; KEGG: fra:Francci3_3178 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS YP_004584513.1 PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: fal:FRAAL5213 putative 23S rRNA methylase YP_004584514.1 TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: fal:FRAAL5214 50S ribosomal protein L20; PFAM: Ribosomal protein L20 YP_004584515.1 TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: fri:FraEuI1c_1702 ribosomal protein L35; PFAM: Ribosomal protein L35 YP_004584516.1 TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor IF-3; KEGG: fra:Francci3_3182 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal YP_004584517.1 KEGG: fra:Francci3_3183 hypothetical protein YP_004584518.1 KEGG: fra:Francci3_3184 chromosome partitioning ATPase-like protein YP_004584519.1 PFAM: Sulfatase; KEGG: cwo:Cwoe_2363 sulfatase YP_004584520.1 KEGG: fre:Franean1_3341 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004584521.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_3340 TetR family transcriptional regulator YP_004584522.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: fra:Francci3_3185 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_004584523.1 TIGRFAM: DHBP synthase RibB; GTP cyclohydrolase II; HAMAP: GTP cyclohydrolase-2; KEGG: fra:Francci3_3186 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; PFAM: DHBP synthase RibB; GTP cyclohydrolase II YP_004584524.1 TIGRFAM: Lumazine-binding protein; KEGG: fri:FraEuI1c_1696 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein YP_004584525.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: fri:FraEuI1c_1695 CMP/dCMP deaminase zinc-binding protein YP_004584526.1 TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: fra:Francci3_3188 ribulose-5-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase YP_004584527.1 PFAM: Protein of unknown function DUF574; KEGG: fal:FRAAL4707 hypothetical protein YP_004584529.1 KEGG: mpd:MCP_0772 hypothetical protein YP_004584530.1 PFAM: NusB/RsmB/TIM44; Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: fal:FRAAL5224 hypothetical protein YP_004584531.1 PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: fra:Francci3_3190 methionyl-tRNA formyltransferase YP_004584532.1 PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: fre:Franean1_1718 peptide deformylase YP_004584533.1 KEGG: fri:FraEuI1c_1689 primosome assembly protein PriA YP_004584534.1 PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: fal:FRAAL5227 S-adenosylmethionine synthetase YP_004584535.1 TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: fri:FraEuI1c_1687 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein YP_004584536.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: fre:Franean1_1714 DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6 YP_004584537.1 KEGG: fre:Franean1_1713 guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; HAMAP: Guanylate kinase, sub-group; SMART: Guanylate kinase/L-type calcium channel region YP_004584538.1 KEGG: fra:Francci3_3196 putative integration host factor MihF YP_004584539.1 TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; KEGG: fal:FRAAL5233 orotidine-5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core YP_004584540.1 TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: fre:Franean1_1710 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like YP_004584541.1 TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: fre:Franean1_1709 carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal YP_004584542.1 TIGRFAM: Dihydroorotase multifunctional complex type; KEGG: fri:FraEuI1c_1679 dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase 1 YP_004584543.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: fre:Franean1_1706 aspartate carbamoyltransferase catalytic subunit YP_004584545.1 HAMAP: Bifunctional protein pyrR; KEGG: fra:Francci3_3203 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase YP_004584546.1 KEGG: fri:FraEuI1c_1676 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004584547.1 PFAM: NusB/RsmB/TIM44; manually curated; TIGRFAM: NusB antitermination factor; KEGG: fri:FraEuI1c_1675 NusB antitermination factor; HAMAP: N utilization substance protein B-like protein YP_004584548.1 TIGRFAM: Translation elongation factor P; HAMAP: Translation elongation factor P; KEGG: fre:Franean1_1702 elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central YP_004584549.1 PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: fri:FraEuI1c_1673 3-dehydroquinate dehydratase, type II YP_004584550.1 PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: fal:FRAAL5245 3-dehydroquinate synthase YP_004584551.1 SMART: ATPase, AAA+ type, core; HAMAP: Shikimate kinase; KEGG: fal:FRAAL5246 shikimate kinase; PFAM: Shikimate kinase YP_004584552.1 TIGRFAM: Chorismate synthase; KEGG: fra:Francci3_3209 chorismate synthase; PFAM: Chorismate synthase YP_004584553.1 PFAM: Peptidase A24A, prepilin type IV; KEGG: fra:Francci3_3210 peptidase A24A, prepilin type IV YP_004584554.1 KEGG: fre:Franean1_1697 shikimate dehydrogenase substrate binding subunit; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YP_004584555.1 KEGG: fra:Francci3_3212 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like YP_004584556.1 SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: fre:Franean1_1695 Holliday junction resolvase-like protein; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like YP_004584557.1 KEGG: fal:FRAAL5253 hypothetical protein YP_004584558.1 KEGG: fra:Francci3_3216 hypothetical protein YP_004584559.1 KEGG: fre:Franean1_1691 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core YP_004584560.1 PFAM: PaaX-like, C-terminal; PaaX-like, N-terminal; KEGG: fre:Franean1_1685 PaaX family transcriptional regulator YP_004584561.1 KEGG: fra:Francci3_3220 putative transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SMART: HTH transcriptional regulator, ArsR YP_004584562.1 KEGG: fre:Franean1_1316 hypothetical protein YP_004584563.1 KEGG: rop:ROP_pROB02-00900 oxidoreductase; PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region YP_004584564.1 KEGG: rop:ROP_pROB02-00910 hypothetical protein YP_004584565.1 PFAM: Aminoglycoside phosphotransferase; KEGG: rop:ROP_pROB02-00920 putative phosphotransferase YP_004584566.1 manually curated; KEGG: rop:ROP_pROB02-00930 putative oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004584567.1 KEGG: rop:ROP_pROB02-00950 putative fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004584568.1 KEGG: rop:ROP_pROB02-00960 hypothetical protein YP_004584569.1 KEGG: rop:ROP_pROB02-00970 cytochrome P450; PFAM: Cytochrome P450 YP_004584570.1 KEGG: rop:ROP_pROB02-00980 hypothetical protein YP_004584571.1 KEGG: rop:ROP_pROB02-01050 Baeyer-Villiger monooxygenase YP_004584572.1 KEGG: kfl:Kfla_3688 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004584573.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004584574.1 KEGG: rop:ROP_pROB02-01070 putative CdaR family transcriptional regulator; PFAM: GAF; SMART: GAF YP_004584575.1 KEGG: cwo:Cwoe_4004 ABC-type sugar transport system periplasmic component-like protein YP_004584576.1 PFAM: ABC transporter-like; KEGG: cwo:Cwoe_4017 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004584577.1 PFAM: Bacterial inner-membrane translocator; KEGG: fal:FRAAL2526 ribose ABC transporter permease YP_004584579.1 KEGG: fal:FRAAL1615 hypothetical protein YP_004584580.1 SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: fra:Francci3_4082 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type YP_004584583.1 KEGG: dwi:Dwil_GK10816 GK10816 gene product from transcript GK10816-RA YP_004584584.1 PFAM: Protein of unknown function DUF2277; KEGG: fre:Franean1_1986 hypothetical protein YP_004584585.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: afw:Anae109_4059 NAD-dependent epimerase/dehydratase YP_004584586.1 KEGG: cfl:Cfla_0310 ATPase YP_004584588.1 KEGG: cwo:Cwoe_3719 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004584589.1 KEGG: fre:Franean1_0340 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004584590.1 KEGG: fal:FRAAL0824 putative two-component system sensor kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like YP_004584593.1 KEGG: rer:RER_16070 arylsulfatase; PFAM: Sulfatase YP_004584594.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: msm:MSMEG_5533 4Fe-4S ferredoxin, iron-sulfur binding YP_004584595.1 PFAM: HI0933-like protein; FAD dependent oxidoreductase; KEGG: rha:RHA1_ro01604 L-aspartate oxidase YP_004584597.1 KEGG: fre:Franean1_2519 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004584598.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: fal:FRAAL4839 ABC peptide transporter; membrane component YP_004584599.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL4838 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component YP_004584600.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL4837 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component YP_004584601.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: fal:FRAAL4836 oligopeptide ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004584602.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: fal:FRAAL4835 peptide ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004584603.1 PFAM: Luciferase-like, subgroup; KEGG: fal:FRAAL4834 putative monooxygenase, FMN dependent YP_004584604.1 KEGG: fri:FraEuI1c_3064 alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding YP_004584605.1 PFAM: Cation efflux protein; KEGG: sco:SCO3521 integral membrane protein YP_004584606.1 KEGG: sro:Sros_4982 putative transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004584607.1 PFAM: ABC transporter metal-binding lipoprotein; KEGG: fra:Francci3_2479 periplasmic solute binding protein YP_004584608.1 PFAM: ABC transporter-like; KEGG: fra:Francci3_2478 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004584609.1 PFAM: ABC-3; KEGG: fra:Francci3_2477 hypothetical protein YP_004584610.1 PFAM: ABC-3; KEGG: fra:Francci3_2476 hypothetical protein YP_004584611.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004584612.1 PFAM: Ferric-uptake regulator; KEGG: tcu:Tcur_3230 Fur family ferric uptake regulator YP_004584613.1 PFAM: Transposase, mutator type; KEGG: scb:SCAB_0381 transposase YP_004584614.1 KEGG: cpu:cpfrc_00050 hypothetical protein YP_004584615.1 KEGG: fra:Francci3_2480 hypothetical protein YP_004584616.1 PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: stp:Strop_3014 cobalamin synthesis protein, P47K YP_004584617.1 PFAM: WD40 repeat, subgroup; KEGG: gvi:glr0535 WD-40 repeat-containing protein YP_004584618.1 PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: vcn:VOLCADRAFT_107727 hypothetical protein YP_004584619.1 KEGG: nha:Nham_3446 nitrate reductase molybdenum cofactor assembly chaperone YP_004584621.1 PFAM: PemK-like protein; KEGG: mar:MAE_62380 PemK-like protein YP_004584622.1 KEGG: nfa:nfa12010 putative alkanesulfonate monooxygenase YP_004584623.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; KEGG: nfa:nfa12000 putative acyl-CoA dehydrogenase YP_004584624.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: azc:AZC_3175 putative FMNH2-dependent monooxygenase YP_004584625.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004584626.1 KEGG: sma:SAV_1208 monooxygenase; PFAM: Luciferase-like, subgroup YP_004584627.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: sma:SAV_1209 LysR family transcriptional regulator YP_004584628.1 KEGG: gbr:Gbro_2704 hypothetical protein YP_004584629.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_3482 TetR family transcriptional regulator YP_004584630.1 KEGG: fra:Francci3_1072 (NiFe) hydrogenase maturation protein HypF YP_004584631.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sgr:SGR_1331 putative acetyltransferase YP_004584632.1 KEGG: fre:Franean1_5357 hypothetical protein YP_004584633.1 KEGG: aca:ACP_2973 anti-anti-sigma factor family protein; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; ATP-binding region, ATPase-like YP_004584634.1 KEGG: saq:Sare_2656 hypothetical protein YP_004584635.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fal:FRAAL5326 hypothetical protein YP_004584636.1 KEGG: tfu:Tfu_0703 transposase, IS605 OrfB; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal YP_004584637.1 KEGG: fre:Franean1_1650 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004584638.1 SMART: ATPase, AAA+ type, core; Toll-Interleukin receptor; KEGG: mba:Mbar_A0545 hypothetical protein YP_004584639.1 KEGG: rrs:RoseRS_0128 peptidase C14, caspase catalytic subunit P20 YP_004584640.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fre:Franean1_4690 GCN5-related N-acetyltransferase YP_004584641.1 KEGG: fra:Francci3_0210 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004584642.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: nml:Namu_5258 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter-like YP_004584643.1 PFAM: ABC-2 type transporter; KEGG: nml:Namu_5259 ABC-2 type transporter YP_004584644.1 PFAM: Bacterial transcriptional activator domain; Signal transduction response regulator, C-terminal; KEGG: nml:Namu_5260 winged helix family transcriptional regulator YP_004584645.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: fra:Francci3_1010 acyl-CoA dehydrogenase YP_004584646.1 TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: mmi:MMAR_1753 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT YP_004584647.1 KEGG: fre:Franean1_6692 phosphoesterase PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase YP_004584649.1 PFAM: PemK-like protein; KEGG: mar:MAE_62380 PemK-like protein YP_004584650.1 PFAM: NUDIX hydrolase domain; KEGG: sro:Sros_7559 NUDIX hydrolase YP_004584651.1 PFAM: Plasmid stabilisation system; KEGG: fra:Francci3_2679 plasmid stabilization system protein YP_004584652.1 TIGRFAM: Prevent-host-death protein; KEGG: fra:Francci3_2678 prevent-host-death protein YP_004584653.1 PFAM: Serine/threonine-protein kinase-like domain; RDD; KEGG: fre:Franean1_6771 WD-40 repeat-containing serine/threonin protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004584654.1 PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: fal:FRAAL4364 transcriptional regulator YP_004584655.1 PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: fra:Francci3_2833 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004584656.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: fal:FRAAL4366 putative sugar ABC transporter, sugar-binding protein YP_004584657.1 PFAM: Metallophosphoesterase; KEGG: fra:Francci3_2836 metallophosphoesterase YP_004584658.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fra:Francci3_2837 binding-protein-dependent transport systems inner membrane component YP_004584659.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL4369 sn-glycerol 3-phosphate ABC transporter membrane protein YP_004584660.1 KEGG: fri:FraEuI1c_1351 activator of HSP90 ATPase 1 family protein YP_004584661.1 PFAM: HTH transcriptional regulator, ArsR; KEGG: fri:FraEuI1c_1352 regulatory protein IclR YP_004584662.1 KEGG: gob:Gobs_2169 hypothetical protein YP_004584663.1 KEGG: sgr:SGR_3465 putative oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_004584664.1 KEGG: fal:FRAAL0531 putative tyrosinase (monophenol monooxygenase); PFAM: Tyrosinase YP_004584665.1 KEGG: fra:Francci3_0238 hypothetical protein YP_004584666.1 manually curated; KEGG: fra:Francci3_1509 hypothetical protein YP_004584667.1 PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: kfl:Kfla_1195 ATPase BadF/BadG/BcrA/BcrD type YP_004584668.1 KEGG: hoh:Hoch_5768 trehalose-phosphatase; PFAM: Glycosyl transferase, family 20 YP_004584669.1 KEGG: xca:xccb100_1161 glucosylglycerol-phosphate synthase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Sucrose-6F-phosphate phosphohydrolase, plant/cyanobacteria YP_004584670.1 PFAM: Protein of unknown function DUF72; KEGG: fra:Francci3_3289 hypothetical protein YP_004584671.1 PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: fra:Francci3_1918 catalase/peroxidase HPI YP_004584672.1 KEGG: fre:Franean1_1532 ferric uptake regulator family protein YP_004584675.1 KEGG: bte:BTH_I0976 cell division protein FtsK YP_004584676.1 KEGG: cwo:Cwoe_4958 hypothetical protein YP_004584677.1 KEGG: cwo:Cwoe_4959 hypothetical protein YP_004584678.1 KEGG: cwo:Cwoe_4961 hypothetical protein YP_004584679.1 KEGG: dwi:Dwil_GK24884 GK24884 gene product from transcript GK24884-RA YP_004584680.1 KEGG: cwo:Cwoe_4963 hypothetical protein YP_004584681.1 KEGG: ank:AnaeK_2798 response regulator receiver YP_004584684.1 KEGG: cwo:Cwoe_4967 hypothetical protein YP_004584685.1 KEGG: cwo:Cwoe_4968 hypothetical protein YP_004584687.1 KEGG: fre:Franean1_6766 endonuclease/exonuclease/phosphatase YP_004584689.1 KEGG: mva:Mvan_0359 hypothetical protein YP_004584690.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sco:SCO6784 regulatory protein YP_004584691.1 KEGG: fal:FRAAL4779 putative oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004584692.1 KEGG: fre:Franean1_1960 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase YP_004584694.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: fal:FRAAL4213 putative taurine dioxygenase YP_004584695.1 KEGG: mau:Micau_2723 hypothetical protein YP_004584696.1 PFAM: Protein of unknown function DUF779; KEGG: mab:MAB_0973 hypothetical protein YP_004584697.1 PFAM: Aldehyde dehydrogenase; KEGG: nfa:nfa29950 putative aldehyde dehydrogenase YP_004584698.1 PFAM: GAF; KEGG: nfa:nfa41070 hypothetical protein YP_004584699.1 KEGG: fra:Francci3_3449 tetratricopeptide TPR_4; PFAM: NB-ARC; Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SMART: Toll-Interleukin receptor; Tetratricopeptide repeat YP_004584700.1 SMART: ATPase, AAA+ type, core; manually curated; KEGG: fri:FraEuI1c_4718 ABC transporter transmembrane region; PFAM: ABC transporter-like; ABC transporter, transmembrane region YP_004584701.1 KEGG: fri:FraEuI1c_3975 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004584702.1 PFAM: Putative esterase; KEGG: fra:Francci3_2744 putative esterase YP_004584703.1 KEGG: fre:Franean1_1547 hypothetical protein YP_004584704.1 KEGG: fal:FRAAL6506 putative nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding YP_004584705.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004584706.1 PFAM: Protein of unknown function DUF347; KEGG: cpy:Cphy_1471 hypothetical protein YP_004584707.1 PFAM: Conserved hypothetical protein CHP00245; KEGG: fri:FraEuI1c_2660 conserved hypothetical protein CHP00245 YP_004584708.1 PFAM: Transglycosylase-like; KEGG: fre:Franean1_6585 transglycosylase domain-containing protein YP_004584709.1 KEGG: fal:FRAAL0463 hypothetical protein YP_004584710.1 PFAM: Protein of unknown function DUF86; KEGG: fra:Francci3_1884 hypothetical protein YP_004584711.1 PFAM: Nucleotidyltransferase; KEGG: fre:Franean1_0697 DNA polymerase beta subunit YP_004584712.1 KEGG: fra:Francci3_1855 hypothetical protein YP_004584713.1 KEGG: fra:Francci3_1852 hypothetical protein YP_004584714.1 KEGG: fri:FraEuI1c_1424 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004584715.1 KEGG: fri:FraEuI1c_1425 hypothetical protein YP_004584716.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fal:FRAAL0390 transmembrane efflux protein YP_004584717.1 KEGG: nca:Noca_4943 hypothetical protein YP_004584718.1 SMART: Helix-turn-helix, AraC domain; KEGG: cwo:Cwoe_0509 helix-turn-helix, AraC domain protein YP_004584719.1 KEGG: fre:Franean1_6450 hypothetical protein YP_004584720.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stp:Strop_3959 glyoxalase/bleomycin resistance protein/dioxygenase YP_004584721.1 KEGG: fra:Francci3_2377 hypothetical protein YP_004584724.1 KEGG: tth:TTC1284 nucleotidyltransferase; manually curated; PFAM: Protein of unknown function DUF86 YP_004584725.1 PFAM: Nucleotidyltransferase; KEGG: fre:Franean1_5548 DNA polymerase beta subunit YP_004584726.1 PFAM: Integrase, catalytic core; KEGG: fre:Franean1_3089 integrase catalytic region YP_004584727.1 PFAM: Transposase IS3/IS911; KEGG: fre:Franean1_3088 transposase IS3/IS911 family protein YP_004584728.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: fri:FraEuI1c_2673 ADP-ribosylation/crystallin J1 YP_004584729.1 KEGG: mil:ML5_2695 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004584730.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mil:ML5_2697 glyoxalase/bleomycin resistance protein/dioxygenase YP_004584731.1 SMART: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; KEGG: fri:FraEuI1c_7010 adenylosuccinate synthase; PFAM: Adenylosuccinate synthetase YP_004584732.1 KEGG: sro:Sros_8966 hypothetical protein YP_004584733.1 PFAM: Heat shock protein DnaJ, N-terminal; KEGG: fri:FraEuI1c_7012 heat shock protein DnaJ domain protein YP_004584734.1 PFAM: NUDIX hydrolase domain; KEGG: fri:FraEuI1c_7013 NUDIX hydrolase YP_004584735.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004584736.1 KEGG: fri:FraEuI1c_2629 thioesterase superfamily protein YP_004584737.1 KEGG: fre:Franean1_4383 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004584738.1 KEGG: fre:Franean1_4384 hypothetical protein YP_004584739.1 KEGG: tbi:Tbis_0818 von Willebrand factor type A YP_004584740.1 KEGG: ace:Acel_0091 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1 YP_004584741.1 KEGG: fra:Francci3_1509 hypothetical protein YP_004584742.1 TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; PAS fold; GAF; ATP-binding region, ATPase-like; KEGG: sgr:SGR_531 hypothetical protein; SMART: Protein phosphatase 2C-related; GAF; PAS YP_004584743.1 TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Domain of unknown function DUF1605; Helicase-associated region; DNA/RNA helicase, C-terminal; KEGG: tcu:Tcur_2667 ATP-dependent helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal YP_004584744.1 KEGG: cai:Caci_3784 aldo/keto reductase; PFAM: Aldo/keto reductase YP_004584745.1 PFAM: Protein of unknown function DUF820; KEGG: kra:Krad_0531 protein of unknown function DUF820 YP_004584746.1 KEGG: fri:FraEuI1c_0058 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein YP_004584747.1 KEGG: fri:FraEuI1c_0059 hypothetical protein YP_004584748.1 KEGG: afo:Afer_1598 metallophosphoesterase YP_004584749.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004584750.1 PFAM: Helix-turn-helix type 3 YP_004584751.1 TIGRFAM: Conserved hypothetical protein CHP03085; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: fal:FRAAL0654 hypothetical protein YP_004584752.1 KEGG: bsb:Bresu_0737 protein of unknown function DUF125 transmembrane; manually curated; PFAM: Protein of unknown function DUF125, transmembrane YP_004584753.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fre:Franean1_5252 glyoxalase/bleomycin resistance protein/dioxygenase YP_004584754.1 KEGG: fal:FRAAL5637 hypothetical protein; manually curated; PFAM: Amidohydrolase 1 YP_004584755.1 PFAM: Protein of unknown function DUF81; KEGG: fal:FRAAL4960 putative integral membrane protein YP_004584756.1 KEGG: fra:Francci3_1239 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004584757.1 KEGG: fra:Francci3_0339 heat shock protein DnaJ-like protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal YP_004584758.1 PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; KEGG: ppn:Palpr_0770 ketopantoate reductase ApbA/pane domain protein YP_004584759.1 KEGG: fra:Francci3_3245 carbonate dehydratase; PFAM: Carbonic anhydrase; Sulphate transporter YP_004584760.1 PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; KEGG: fra:Francci3_0108 twin-arginine translocation pathway signal YP_004584761.1 KEGG: sgr:SGR_6034 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1 YP_004584762.1 KEGG: fri:FraEuI1c_5796 hypothetical protein YP_004584763.1 TIGRFAM: Exopolysaccharide synthesis protein; KEGG: fre:Franean1_1272 non-specific protein-tyrosine kinase; PFAM: Lipopolysaccharide biosynthesis YP_004584764.1 PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: fre:Franean1_1271 polysaccharide biosynthesis protein CapD YP_004584765.1 KEGG: fre:Franean1_1268 protein tyrosine/serine phosphatase YP_004584766.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: fre:Franean1_1267 lytic transglycosylase catalytic YP_004584767.1 KEGG: fra:Francci3_3480 regulator of polyketide synthase expression-like protein YP_004584768.1 KEGG: fre:Franean1_1265 (acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase YP_004584769.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: fri:FraEuI1c_1187 3-oxoacyl-(acyl-carrier-protein) synthase III YP_004584770.1 TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: fre:Franean1_1263 acyl carrier protein; PFAM: Phosphopantetheine-binding YP_004584771.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: fra:Francci3_3484 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004584772.1 KEGG: fal:FRAAL5672 propionyl-CoA carboxylase beta chain 6 (PCCase) (propanoyl-CoA:carbon dioxide ligase); PFAM: Carboxyl transferase YP_004584773.1 KEGG: fra:Francci3_2831 homoserine O-acetyltransferase; manually curated; TIGRFAM: Homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; HAMAP: Homoserine O-acetyltransferase YP_004584774.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: fra:Francci3_2830 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_004584776.1 KEGG: fra:Francci3_3487 ATPase; PFAM: ATPase, AAA-type, core; Peptidase M41; SMART: ATPase, AAA+ type, core YP_004584777.1 KEGG: fre:Franean1_1257 hypothetical protein YP_004584778.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004584779.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: tbi:Tbis_2829 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS YP_004584780.1 KEGG: fre:Franean1_0509 hypothetical protein YP_004584781.1 KEGG: fal:FRAAL5677 hypothetical protein YP_004584782.1 KEGG: sma:SAV_4365 molybdopterin-guanine dinucleotide biosynthesis protein YP_004584783.1 TIGRFAM: Molybdenum cofactor biosynthesis protein A; Twin-arginine translocation pathway, signal sequence; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: fra:Francci3_3491 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_004584784.1 KEGG: fre:Franean1_1252 polyphosphate--glucose phosphotransferase; PFAM: ROK YP_004584785.1 KEGG: fal:FRAAL5683 putative DNA-binding protein YP_004584786.1 KEGG: fre:Franean1_1250 hypothetical protein YP_004584787.1 KEGG: fal:FRAAL5685 hypothetical protein; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related YP_004584788.1 KEGG: fre:Franean1_1248 cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator YP_004584789.1 KEGG: fre:Franean1_1247 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III YP_004584790.1 manually curated; KEGG: fra:Francci3_3497 Xaa-Pro aminopeptidase; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal YP_004584791.1 KEGG: fre:Franean1_1245 putative lysyl tRNA synthetase-like protein YP_004584792.1 KEGG: fri:FraEuI1c_1169 hypothetical protein YP_004584793.1 KEGG: fra:Francci3_3500 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004584794.1 TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; GAF; ATP-binding region, ATPase-like; KEGG: fre:Franean1_1241 putative PAS/PAC sensor protein; SMART: Protein phosphatase 2C-related; GAF YP_004584795.1 TIGRFAM: Acetoacetyl-CoA synthase; KEGG: fra:Francci3_3504 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase YP_004584796.1 KEGG: fra:Francci3_3505 sigma 38; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4 YP_004584797.1 KEGG: fra:Francci3_3506 hypothetical protein YP_004584798.1 TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: fal:FRAAL5699 vitamin B12-dependent ribonucleotide reductase; PFAM: Ribonucleotide reductase class II vitamin B12-dependent; Ribonucleotide reductase large subunit, C-terminal YP_004584799.1 TIGRFAM: Ribonucleotide reductase regulator NrdR-like; HAMAP: Transcriptional repressor nrdR; KEGG: fri:FraEuI1c_1152 ATP-cone domain protein; PFAM: ATP-cone YP_004584800.1 KEGG: fre:Franean1_1233 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup YP_004584801.1 TIGRFAM: Peptidase S24, LexA repressor; HAMAP: LexA repressor; KEGG: fal:FRAAL5703 LexA repressor; PFAM: LexA DNA-binding region; Peptidase S24/S26A/S26B, conserved region YP_004584802.1 PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: fra:Francci3_3516 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase YP_004584803.1 KEGG: fre:Franean1_1229 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted YP_004584804.1 KEGG: fal:FRAAL5704 ATP/GTP-binding protein; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related YP_004584805.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fri:FraEuI1c_1143 alpha/beta hydrolase fold protein YP_004584806.1 KEGG: fra:Francci3_3517 hypothetical protein YP_004584807.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; KEGG: fal:FRAAL5712 (dimethylallyl)adenosine tRNA methylthiotransferase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM YP_004584808.1 SMART: Metal-dependent phosphohydrolase, HD region; K Homology; TIGRFAM: 2,3-cyclic-nucleotide 2-phosphodiesterase; HDIG; KEGG: fre:Franean1_1221 RNA binding metal dependent phosphohydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; K Homology, type 1, subgroup YP_004584809.1 KEGG: fri:FraEuI1c_1139 regulatory protein RecX; HAMAP: Regulatory protein recX; PFAM: Regulatory protein RecX YP_004584810.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: fre:Franean1_1219 recombinase A; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA YP_004584811.1 KEGG: fra:Francci3_3526 hypothetical protein YP_004584812.1 KEGG: fra:Francci3_3527 DEAD/DEAH box helicase-like protein; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal YP_004584813.1 KEGG: fre:Franean1_1211 hypothetical protein YP_004584814.1 PFAM: PspA/IM30; KEGG: fra:Francci3_3535 phage shock protein A, PspA YP_004584815.1 KEGG: fre:Franean1_1208 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004584816.1 KEGG: fre:Franean1_1207 competence/damage-inducible protein CinA; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding YP_004584817.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: fre:Franean1_1206 CDP-alcohol phosphatidyltransferase YP_004584818.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: fra:Francci3_3540 hypothetical protein; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM YP_004584819.1 KEGG: fra:Francci3_3541 hypothetical protein YP_004584820.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004584821.1 PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: fra:Francci3_3542 cell divisionFtsK/SpoIIIE YP_004584822.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: fri:FraEuI1c_1123 RNA-metabolising metallo-beta-lactamase YP_004584823.1 TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: fre:Franean1_1199 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase YP_004584824.1 KEGG: fre:Franean1_4861 HNH endonuclease YP_004584825.1 PFAM: Acetate/butyrate kinase; TIGRFAM: Acetate kinase; HAMAP: Acetate kinase; KEGG: fal:FRAAL5741 acetate kinase A (propionate kinase 2) YP_004584826.1 HAMAP: phosphoketolase; KEGG: fre:Franean1_1196 putative phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal YP_004584827.1 PFAM: Thymidylate synthase ThyX; TIGRFAM: Thymidylate synthase ThyX; HAMAP: Thymidylate synthase thyX; KEGG: fra:Francci3_3547 FAD-dependent thymidylate synthase YP_004584828.1 KEGG: fre:Franean1_1193 hypothetical protein YP_004584829.1 PFAM: Heat shock protein 70; KEGG: fre:Franean1_1192 2-alkenal reductase YP_004584830.1 KEGG: fra:Francci3_3552 hypothetical protein YP_004584831.1 PFAM: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: fal:FRAAL5751 dihydrodipicolinate reductase YP_004584832.1 KEGG: fal:FRAAL5752 putative zinc protease; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal YP_004584833.1 PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; TIGRFAM: Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: fre:Franean1_1189 polynucleotide phosphorylase/polyadenylase YP_004584834.1 KEGG: fra:Francci3_3556 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15 YP_004584835.1 TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: fra:Francci3_3557 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase YP_004584836.1 TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: fre:Franean1_1186 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 2, C-terminal, bacterial-type YP_004584837.1 PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: fra:Francci3_3559 phosphoesterase, RecJ-like protein YP_004584838.1 TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: fri:FraEuI1c_1104 ribosome-binding factor A; PFAM: Ribosome-binding factor A YP_004584839.1 PFAM: Protein of unknown function DUF503; KEGG: fra:Francci3_3561 hypothetical protein YP_004584840.1 TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; KEGG: fra:Francci3_3562 translation initiation factor IF-2; SMART: Ras small GTPase, Ras type YP_004584841.1 KEGG: bfo:BRAFLDRAFT_63481 hypothetical protein YP_004584842.1 KEGG: fre:Franean1_1181 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF448 YP_004584843.1 KEGG: fre:Franean1_1180 NusA antitermination factor; TIGRFAM: Transcription termination factor NusA; PFAM: Transcription factor NusA, N-terminal YP_004584844.1 KEGG: fra:Francci3_3565 hypothetical protein; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090 YP_004584845.1 KEGG: fre:Franean1_1178 hypothetical protein YP_004584846.1 KEGG: fra:Francci3_3567 hypothetical protein YP_004584847.1 KEGG: fre:Franean1_1175 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2 YP_004584848.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL5768 putative ABC transporter transmembrane subunit YP_004584849.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL5769 ABC-type (ATP-binding cassette-type) ATPase; SMART: ATPase, AAA+ type, core YP_004584850.1 TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; KEGG: fre:Franean1_1172 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein YP_004584851.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fre:Franean1_1171 GCN5-related N-acetyltransferase YP_004584852.1 TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: fal:FRAAL5772 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YP_004584853.1 KEGG: fri:FraEuI1c_1088 peptidase M50; PFAM: Peptidase M50; SMART: PDZ/DHR/GLGF YP_004584854.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: fra:Francci3_3575 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004584855.1 KEGG: fra:Francci3_3576 poly(3-hydroxybutyrate) depolymerase-like protein YP_004584856.1 TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: fra:Francci3_3577 ribosomal RNA large subunit methyltransferase N; PFAM: Radical SAM YP_004584857.1 PFAM: Phosphatidate cytidylyltransferase; KEGG: fre:Franean1_1165 phosphatidate cytidylyltransferase YP_004584858.1 TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: fre:Franean1_1164 ribosome recycling factor; PFAM: Ribosome recycling factor YP_004584859.1 KEGG: fri:FraEuI1c_1082 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase YP_004584860.1 TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: fre:Franean1_1162 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal YP_004584861.1 KEGG: fre:Franean1_1161 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2 YP_004584862.1 PFAM: Peptidase M23; KEGG: fri:FraEuI1c_1079 peptidase M23 YP_004584863.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004584864.1 KEGG: fra:Francci3_3583 phage integrase; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage YP_004584865.1 KEGG: fal:FRAAL5783 putative DNA processing smf-family protein; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A YP_004584866.1 TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: fra:Francci3_3585 Mg chelatase-related protein; SMART: ATPase, AAA+ type, core YP_004584867.1 KEGG: fra:Francci3_3586 hypothetical protein; HAMAP: Uncharacterised protein family UPF0102; PFAM: Uncharacterised protein family UPF0102 YP_004584868.1 PFAM: Protein of unknown function DUF2469; KEGG: fal:FRAAL5786 hypothetical protein YP_004584869.1 manually curated; KEGG: fal:FRAAL5787 ribonuclease HII; PFAM: Ribonuclease HII/HIII YP_004584870.1 TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: fal:FRAAL5788 putative signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_004584871.1 TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: fal:FRAAL5789 50S ribosomal protein L19; PFAM: Ribosomal protein L19 YP_004584872.1 PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: fal:FRAAL5790 tRNA (guanine-N(1)-)-methyltransferase YP_004584873.1 TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: fal:FRAAL5791 16S rRNA-processing protein RimM; PFAM: RimM protein; PRC-barrel YP_004584874.1 HAMAP: Uncharacterised protein family UPF0109, bacterial; KEGG: fri:FraEuI1c_1068 hypothetical protein YP_004584875.1 TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: fra:Francci3_3594 30S ribosomal protein S16; PFAM: Ribosomal protein S16 YP_004584876.1 TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: fal:FRAAL5793 signal recognition particle GTPase; SMART: ATPase, AAA+ type, core YP_004584877.1 TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: fra:Francci3_3596 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core YP_004584878.1 KEGG: fre:Franean1_1145 chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal; SMCs flexible hinge YP_004584879.1 KEGG: fri:FraEuI1c_1063 hypothetical protein YP_004584880.1 KEGG: fal:FRAAL5799 hypothetical protein YP_004584881.1 KEGG: fre:Franean1_1141 hypothetical protein YP_004584882.1 PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: fra:Francci3_3600 formamidopyrimidine-DNA glycosylase YP_004584883.1 KEGG: fal:FRAAL5804 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA binding YP_004584884.1 PFAM: Fatty acid synthesis plsX protein; KEGG: fre:Franean1_1138 fatty acid synthesis PlsX protein YP_004584885.1 TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: fre:Franean1_1137 50S ribosomal protein L32; PFAM: Ribosomal protein L32p YP_004584886.1 PFAM: Protein of unknown function DUF177; KEGG: fre:Franean1_1136 hypothetical protein YP_004584888.1 PFAM: ATP-binding region, ATPase-like; KEGG: scb:SCAB_5961 hypothetical protein YP_004584889.1 manually curated; KEGG: scb:SCAB_63591 hypothetical protein YP_004584890.1 PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: fra:Francci3_3605 phosphopantetheine adenylyltransferase YP_004584891.1 KEGG: fre:Franean1_1133 putative methyltransferase; TIGRFAM: Conserved hypothetical protein CHP00095; PFAM: Protein of unknown function methylase putative YP_004584892.1 KEGG: fra:Francci3_3607 DEAD/DEAH box helicase-like protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004584893.1 TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: fri:FraEuI1c_1051 ribosomal protein L28; PFAM: Ribosomal protein L28 YP_004584894.1 TIGRFAM: Phosphomethylpyrimidine kinase type-2; KEGG: fal:FRAAL5819 bifunctional: hydroxy-methylpyrimidine kinase (HMP kinase); hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase); PFAM: Phosphomethylpyrimidine kinase type-1 YP_004584895.1 TIGRFAM: Thiamine-monophosphate kinase; KEGG: tcu:Tcur_3443 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal YP_004584896.1 PFAM: Transcription regulator, AsnC-type, C-terminal; KEGG: fre:Franean1_1128 AsnC family transcriptional regulator YP_004584897.1 KEGG: fre:Franean1_1129 hypothetical protein YP_004584898.1 PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: fre:Franean1_1130 D-alanyl-alanine synthetase A YP_004584899.1 KEGG: fra:Francci3_3614 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal YP_004584900.1 TIGRFAM: Coenzyme F420, CofC; KEGG: fri:FraEuI1c_1043 2-phospho-L-lactate guanylyltransferase CofC YP_004584901.1 KEGG: fal:FRAAL5825 hypothetical protein; PFAM: Transglutaminase-like; Bacterial transglutaminase-like, N-terminal; SMART: Transglutaminase-like YP_004584902.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; HAMAP: Polyphosphate kinase; KEGG: fre:Franean1_1116 polyphosphate kinase YP_004584903.1 KEGG: fre:Franean1_1115 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein YP_004584904.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: fre:Franean1_1114 isopropylmalate isomerase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_004584905.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: fre:Franean1_1113 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YP_004584906.1 manually curated; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; KEGG: fri:FraEuI1c_1035 transcriptional regulator, IclR family; SMART: Transcriptional regulator IclR, N-terminal YP_004584907.1 KEGG: tcu:Tcur_1118 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp YP_004584908.1 PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: fri:FraEuI1c_5043 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA YP_004584909.1 KEGG: fre:Franean1_1110 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004584910.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004584911.1 KEGG: fra:Francci3_3625 hypothetical protein YP_004584913.1 KEGG: scb:SCAB_56081 DNA-binding protein; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004584914.1 KEGG: scb:SCAB_56091 hydrolase; TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain YP_004584915.1 PFAM: NUDIX hydrolase domain; KEGG: sco:SCO5336 MutT-like protein YP_004584916.1 KEGG: scb:SCAB_56111 hypothetical protein YP_004584917.1 KEGG: fri:FraEuI1c_0273 hypothetical protein YP_004584918.1 KEGG: fri:FraEuI1c_6853 hypothetical protein YP_004584919.1 KEGG: fre:Franean1_6268 hypothetical protein YP_004584920.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: kfl:Kfla_0388 cell divisionFtsK/SpoIIIE YP_004584921.1 KEGG: fri:FraEuI1c_6855 hypothetical protein YP_004584924.1 KEGG: fra:Francci3_4521 single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004584926.1 PFAM: DNA primase/polymerase, bifunctional, N-terminal; KEGG: fra:Francci3_1201 hypothetical protein YP_004584928.1 KEGG: rca:Rcas_1512 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase, family A, palm domain YP_004584929.1 KEGG: mil:ML5_3142 hypothetical protein YP_004584930.1 PFAM: Prophage CP4-57 regulatory; KEGG: mil:ML5_3145 regulatory protein MerR YP_004584931.1 PFAM: Integrase, catalytic core, phage; KEGG: mil:ML5_3146 integrase family protein YP_004584932.1 KEGG: fal:FRAAL5836 putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; Domain of unknown function DUF2437 YP_004584933.1 KEGG: fre:Franean1_1104 hypothetical protein YP_004584934.1 KEGG: fre:Franean1_1396 hypothetical protein YP_004584935.1 KEGG: fre:Franean1_1397 hypothetical protein YP_004584936.1 KEGG: fre:Franean1_1398 hypothetical protein YP_004584937.1 PFAM: Aminoglycoside phosphotransferase; KEGG: fre:Franean1_1399 aminoglycoside phosphotransferase YP_004584938.1 PFAM: Methyltransferase type 11; KEGG: fre:Franean1_1400 methyltransferase type 11 YP_004584939.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase related; KEGG: fra:Francci3_3628 putative alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; Pyruvate carboxyltransferase YP_004584941.1 PFAM: Peptidase M48, Ste24p; KEGG: fal:FRAAL3683 putative integral membrane protein YP_004584942.1 PFAM: Penicillinase repressor; KEGG: fal:FRAAL3682 hypothetical protein YP_004584943.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL3681 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004584944.1 KEGG: fal:FRAAL3680 hypothetical protein YP_004584945.1 KEGG: fal:FRAAL3679 hypothetical protein YP_004584946.1 PFAM: Bacitracin resistance protein BacA; KEGG: fal:FRAAL3678 undecaprenyl pyrophosphate phosphatase YP_004584947.1 PFAM: SNARE associated Golgi protein; KEGG: fal:FRAAL3677 hypothetical protein YP_004584949.1 KEGG: fal:FRAAL5839 hypothetical protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp YP_004584950.1 KEGG: fal:FRAAL5840 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core YP_004584951.1 TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: fre:Franean1_1099 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV YP_004584952.1 HAMAP: 3-isopropylmalate dehydrogenase; KEGG: fre:Franean1_1098 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase YP_004584954.1 KEGG: fal:FRAAL5844 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted YP_004584955.1 KEGG: fra:Francci3_3635 2-isopropylmalate synthase; manually curated; TIGRFAM: Yeast 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; HAMAP: 2-isopropylmalate synthase YP_004584956.1 KEGG: fra:Francci3_3636 hypothetical protein YP_004584957.1 TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: fra:Francci3_3637 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT YP_004584958.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: fal:FRAAL5849 ketol-acid reductoisomerase YP_004584959.1 TIGRFAM: Acetolactate synthase, small subunit; KEGG: fre:Franean1_1091 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT YP_004584960.1 TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: fra:Francci3_3640 acetolactate synthase 1 catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_004584961.1 PFAM: Transposase, mutator type; KEGG: scb:SCAB_0381 transposase YP_004584962.1 KEGG: saq:Sare_4424 hypothetical protein YP_004584963.1 PFAM: PilT protein, N-terminal; KEGG: saq:Sare_4425 PilT domain-containing protein YP_004584964.1 manually curated; KEGG: cai:Caci_8267 hypothetical protein YP_004584965.1 PFAM: Penicillin-binding protein, transpeptidase; KEGG: fre:Franean1_1089 penicillin-binding protein transpeptidase YP_004584966.1 TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: fal:FRAAL5853 aspartyl/glutamyl-tRNA amidotransferase subunit B; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase YP_004584967.1 KEGG: fal:FRAAL5854 hypothetical protein YP_004584968.1 PFAM: Amidase; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: fal:FRAAL5855 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_004584969.1 TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; KEGG: fre:Franean1_1084 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit YP_004584970.1 KEGG: saq:Sare_3615 glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004584971.1 PFAM: Amino acid-binding ACT; KEGG: fra:Francci3_3646 amino acid-binding ACT YP_004584972.1 KEGG: fre:Franean1_1082 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT; TIGRFAM: NAD-dependent DNA ligase; HAMAP: DNA ligase; SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT YP_004584973.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: fal:FRAAL5860 hypothetical protein YP_004584974.1 TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: fal:FRAAL5861 tRNA-specific 2-thiouridylase MnmA; PFAM: tRNA methyl transferase-like YP_004584975.1 KEGG: fra:Francci3_3650 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004584976.1 KEGG: fri:FraEuI1c_5147 putative ATP/GTP binding protein YP_004584977.1 PFAM: NUDIX hydrolase domain; KEGG: fri:FraEuI1c_4631 NUDIX hydrolase YP_004584978.1 PFAM: UbiC transcription regulator-associated; KEGG: fri:FraEuI1c_4632 transcriptional regulator, GntR family YP_004584979.1 PFAM: Protein of unknown function DUF2191; KEGG: mbt:JTY_1587 hypothetical protein YP_004584980.1 KEGG: fre:Franean1_1078 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004584981.1 TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; KEGG: fre:Franean1_1077 methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; ArgK protein YP_004584982.1 PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: fra:Francci3_3658 electron transfer flavoprotein subunit alpha YP_004584983.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: fre:Franean1_1074 electron transfer flavoprotein alpha/beta-subunit YP_004584984.1 KEGG: fra:Francci3_3660 putative transcriptional regulator YP_004584985.1 PFAM: Methyltransferase type 11; KEGG: ami:Amir_6056 methyltransferase type 11 YP_004584986.1 PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, core; KEGG: ami:Amir_6057 glycoside hydrolase family 57 YP_004584988.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: fra:Francci3_3661 endonuclease/exonuclease/phosphatase YP_004584989.1 PFAM: Peptidase M48, Ste24p; KEGG: hoh:Hoch_5984 peptidase M48 Ste24p YP_004584990.1 KEGG: amd:AMED_1632 acetyltransferase YP_004584991.1 PFAM: Methyltransferase type 11; KEGG: kfl:Kfla_4928 methyltransferase type 11 YP_004584992.1 KEGG: fra:Francci3_3662 short chain enoyl-CoA hydratase; PFAM: Crotonase, core YP_004584993.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Glycogen debranching enzyme GlgX; KEGG: fre:Franean1_1070 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region YP_004584995.1 KEGG: gob:Gobs_3715 addiction module toxin; manually curated; PFAM: Plasmid stabilisation system YP_004584996.1 TIGRFAM: Prevent-host-death protein; KEGG: rop:ROP_35880 hypothetical protein YP_004584997.1 TIGRFAM: Alpha-glucan phosphorylase; KEGG: fal:FRAAL5884 glycogen phosphorylase; PFAM: Glycosyl transferase, family 35 YP_004584998.1 TIGRFAM: Acetate--CoA ligase; KEGG: fre:Franean1_1068 acetate--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004584999.1 KEGG: fre:Franean1_4243 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004585000.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fra:Francci3_2758 TetR family transcriptional regulator YP_004585001.1 KEGG: fri:FraEuI1c_0978 hypothetical protein YP_004585002.1 KEGG: fra:Francci3_0932 hypothetical protein YP_004585003.1 KEGG: fri:FraEuI1c_0977 protein of unknown function UCP020979 YP_004585004.1 KEGG: fra:Francci3_3669 hypothetical protein YP_004585005.1 KEGG: fre:Franean1_1062 putative ATP/GTP-binding protein YP_004585006.1 KEGG: fra:Francci3_3672 hypothetical protein YP_004585007.1 PFAM: Heat shock protein 70; KEGG: fal:FRAAL5893 putative DnaK protein YP_004585008.1 KEGG: fal:FRAAL5894 hypothetical protein YP_004585009.1 PFAM: Tellurium resistance; KEGG: fre:Franean1_1057 tellurium resistance protein TerA YP_004585010.1 PFAM: Protein of unknown function DUF475; KEGG: fre:Franean1_1056 hypothetical protein YP_004585011.1 PFAM: Bacterial stress protein; KEGG: fra:Francci3_3677 stress protein YP_004585012.1 KEGG: fra:Francci3_3678 alpha amylase, catalytic region; PFAM: Alpha-amylase, C-terminal all beta; Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region YP_004585013.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; KEGG: fre:Franean1_1051 trehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic region YP_004585014.1 PFAM: Aminoglycoside phosphotransferase; KEGG: fre:Franean1_1050 hypothetical protein YP_004585015.1 KEGG: fri:FraEuI1c_0965 1,4-alpha-glucan branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; HAMAP: 1,4-alpha-glucan branching enzyme, core region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region YP_004585016.1 PFAM: Thioredoxin domain; KEGG: fre:Franean1_1048 thioredoxin domain-containing protein YP_004585017.1 KEGG: fra:Francci3_3684 hypothetical protein; TIGRFAM: Protein of unknown function DUF77; PFAM: Protein of unknown function DUF77 YP_004585018.1 KEGG: fra:Francci3_3685 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region YP_004585019.1 KEGG: fri:FraEuI1c_0960 LAO/AO transport system ATPase; TIGRFAM: ArgK protein; PFAM: ArgK protein YP_004585020.1 KEGG: fra:Francci3_3687 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase YP_004585021.1 KEGG: tbi:Tbis_0916 methylmalonyl-CoA epimerase; TIGRFAM: Methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004585022.1 KEGG: fal:FRAAL5911 hypothetical protein YP_004585023.1 KEGG: fra:Francci3_3689 sigma-24; TIGRFAM: RNA polymerase sigma-E type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004585024.1 KEGG: fra:Francci3_0999 crotonyl-CoA reductase; TIGRFAM: Crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004585025.1 KEGG: fre:Franean1_1040 putative cellulose-binding protein YP_004585026.1 KEGG: ace:Acel_0668 hypothetical protein YP_004585027.1 PFAM: Protein of unknown function DUF1232; KEGG: fre:Franean1_1038 hypothetical protein YP_004585028.1 KEGG: fre:Franean1_1037 3-hydroxybutyryl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_004585029.1 KEGG: mbt:JTY_0634 hypothetical protein; TIGRFAM: Conserved hyprothetical protein CHP00028; PFAM: PilT protein, N-terminal YP_004585030.1 manually curated; KEGG: mbt:JTY_0633 hypothetical protein, antitoxin YP_004585031.1 KEGG: fre:Franean1_1036 hypothetical protein; HAMAP: UPF0286 protein; PFAM: Uncharacterised protein family UPF0286 YP_004585032.1 manually curated; KEGG: req:REQ_16990 integral membrane protein YP_004585033.1 KEGG: fra:Francci3_3696 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region YP_004585034.1 TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: fre:Franean1_1034 methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding YP_004585035.1 KEGG: fra:Francci3_3697 hypothetical protein YP_004585036.1 KEGG: fal:FRAAL5923 putative anti-sigma factor antagonist (partial match); TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS YP_004585037.1 KEGG: fra:Francci3_3699 hypothetical protein YP_004585038.1 PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: fri:FraEuI1c_0949 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004585039.1 TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; KEGG: fal:FRAAL5927 putative adenosylcobalamin-dependent diol dehydratase gamma subunit; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type YP_004585040.1 KEGG: fra:Francci3_3706 F0F1 ATP synthase subunit epsilon; HAMAP: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal YP_004585041.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: fal:FRAAL5931 F0F1 ATP synthase subunit beta; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YP_004585042.1 TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: fre:Franean1_1023 F0F1 ATP synthase subunit gamma; PFAM: ATPase, F1 complex, gamma subunit YP_004585043.1 TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: fra:Francci3_3709 F0F1 ATP synthase subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YP_004585044.1 TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: fal:FRAAL5934 F0F1 ATP synthase subunit delta; PFAM: ATPase, F1 complex, OSCP/delta subunit YP_004585045.1 TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: fre:Franean1_1020 F0F1 ATP synthase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast YP_004585046.1 KEGG: fal:FRAAL5936 ATP synthase C chain (lipid-binding protein); HAMAP: ATPase, F0 complex, subunit C; PFAM: ATPase, F0/V0 complex, subunit C YP_004585047.1 TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: fal:FRAAL5937 F0F1 ATP synthase subunit A; PFAM: ATPase, F0 complex, subunit A YP_004585048.1 KEGG: fri:FraEuI1c_0933 hypothetical protein YP_004585049.1 KEGG: fal:FRAAL5940 putative ATP synthase protein I YP_004585050.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: fra:Francci3_3716 glycosyl transferase family protein YP_004585051.1 KEGG: fra:Francci3_3717 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase YP_004585052.1 KEGG: fre:Franean1_1012 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal YP_004585053.1 KEGG: fre:Franean1_1011 HemK family modification methylase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small YP_004585054.1 TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: fal:FRAAL5945 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor YP_004585055.1 TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: fal:FRAAL5947 50S ribosomal protein L31; PFAM: Ribosomal protein L31 YP_004585056.1 TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; GETHR pentapeptide; KEGG: fal:FRAAL5948 transcription termination factor Rho; SMART: ATPase, AAA+ type, core; Cold shock protein YP_004585057.1 TIGRFAM: Homoserine kinase; KEGG: fre:Franean1_1007 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal YP_004585058.1 TIGRFAM: Threonine synthase; KEGG: fal:FRAAL5950 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_004585059.1 PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; KEGG: fri:FraEuI1c_0923 homoserine dehydrogenase YP_004585060.1 KEGG: fra:Francci3_3727 arginine--tRNA ligase YP_004585061.1 KEGG: fre:Franean1_1003 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004585063.1 PFAM: HTH transcriptional regulator, MarR; KEGG: fri:FraEuI1c_4034 regulatory protein MarR YP_004585064.1 PFAM: ABC transporter-like; KEGG: fri:FraEuI1c_4033 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004585065.1 KEGG: fri:FraEuI1c_4032 putative exporter of polyketide antibiotics-like protein YP_004585066.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: hch:HCH_03620 DMT superfamily permease YP_004585067.1 PFAM: Radical SAM; KEGG: hch:HCH_03621 Fe-S oxidoreductase YP_004585068.1 KEGG: hch:HCH_03622 arginase; PFAM: Ureohydrolase YP_004585069.1 KEGG: amd:AMED_1665 beta-lactamase class B YP_004585070.1 PFAM: Glycoside hydrolase, family 16; KEGG: amr:AM1_3194 type I secretion target repeat-containing protein YP_004585071.1 PFAM: SCP-like extracellular; KEGG: ddr:Deide_04060 hypothetical protein YP_004585072.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004585073.1 PFAM: Bacterial stress protein; KEGG: scb:SCAB_8121 hypothetical protein YP_004585074.1 PFAM: Methyltransferase type 11; KEGG: fra:Francci3_3743 methyltransferase type 11 YP_004585075.1 PFAM: DNA helicase, UvrD/REP type; KEGG: fre:Franean1_0992 UvrD/REP helicase YP_004585076.1 KEGG: fri:FraEuI1c_0826 putative DNA helicase YP_004585077.1 KEGG: fre:Franean1_0991 superfamily I DNA/RNA helicase YP_004585078.1 PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: fra:Francci3_0418 lysyl-tRNA synthetase YP_004585079.1 PFAM: Ribonuclease BN-related; KEGG: fra:Francci3_0663 ribonuclease BN YP_004585080.1 PFAM: Beta-lactamase-related; KEGG: fre:Franean1_5968 beta-lactamase YP_004585081.1 KEGG: fre:Franean1_5969 geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal YP_004585082.1 TIGRFAM: Malate dehydrogenase, NAD-dependent; HAMAP: Malate dehydrogenase, NAD-dependent; KEGG: fre:Franean1_5970 malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_004585083.1 KEGG: fre:Franean1_5971 hypothetical protein YP_004585084.1 KEGG: fre:Franean1_5973 hypothetical protein YP_004585085.1 KEGG: fri:FraEuI1c_6155 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, formylation region YP_004585086.1 TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: fri:FraEuI1c_6156 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal YP_004585087.1 KEGG: fal:FRAAL1160 hypothetical protein YP_004585088.1 KEGG: fal:FRAAL1158 hypothetical protein YP_004585089.1 TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: fal:FRAAL1157 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase YP_004585090.1 PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: fra:Francci3_0651 succinyl-CoA synthetase subunit beta YP_004585091.1 KEGG: mil:ML5_0492 cobalamin b12-binding domain protein; TIGRFAM: Methylmalonyl-CoA mutase, C-terminal; PFAM: Cobalamin (vitamin B12)-binding YP_004585092.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fri:FraEuI1c_6164 alpha/beta hydrolase fold protein YP_004585093.1 PFAM: Peptidase M23; KEGG: fre:Franean1_5984 peptidase M23B YP_004585094.1 KEGG: fre:Franean1_5987 ATP-dependent DNA helicase PcrA; TIGRFAM: DNA helicase, ATP-dependent, PcrA type; PFAM: DNA helicase, UvrD/REP type YP_004585095.1 PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; KEGG: fri:FraEuI1c_6183 pyridoxal-5'-phosphate-dependent protein beta subunit YP_004585096.1 PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: fal:FRAAL1150 GMP synthase YP_004585097.1 KEGG: fre:Franean1_5990 sensor protein; PFAM: ATP-binding region, ATPase-like; Nitrate/nitrite sensing protein NIT; HAMP linker domain; SMART: ATP-binding region, ATPase-like; HAMP linker domain YP_004585098.1 PFAM: Dynein light chain-related; KEGG: fra:Francci3_0643 hypothetical protein YP_004585099.1 PFAM: Protein of unknown function DUF742; KEGG: fal:FRAAL1146 hypothetical protein YP_004585100.1 PFAM: Protein of unknown function, ATP binding; KEGG: fre:Franean1_5993 protein of unknown function ATP binding YP_004585101.1 KEGG: fre:Franean1_5994 ABC-type branched-chain amino acid transport systems periplasmic component-like protein YP_004585102.1 KEGG: fal:FRAAL1143 hypothetical protein YP_004585103.1 KEGG: fra:Francci3_0638 hypothetical protein YP_004585104.1 KEGG: fra:Francci3_0637 inosine 5-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase related 2; PFAM: IMP dehydrogenase/GMP reductase YP_004585105.1 SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: fra:Francci3_0636 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core YP_004585106.1 KEGG: fre:Franean1_5999 hypothetical protein YP_004585107.1 KEGG: nda:Ndas_3567 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004585108.1 PFAM: Transcription factor WhiB; KEGG: fre:Franean1_6000 transcription factor WhiB YP_004585109.1 TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: fra:Francci3_0633 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1 YP_004585110.1 KEGG: fal:FRAAL1133 co-chaperonin GroES; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10 YP_004585111.1 KEGG: fra:Francci3_3551 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004585112.1 KEGG: fal:FRAAL1132 hypothetical protein YP_004585113.1 PFAM: Peptidase M22, glycoprotease; TIGRFAM: putative glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: fre:Franean1_6005 metalloendopeptidase glycoprotease family YP_004585114.1 KEGG: fre:Franean1_6006 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004585115.1 KEGG: fre:Franean1_6007 peptidase M22 glycoprotease; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease YP_004585116.1 KEGG: fre:Franean1_6009 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria YP_004585117.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fra:Francci3_0625 alpha/beta hydrolase YP_004585118.1 PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: fri:FraEuI1c_6190 alanine racemase YP_004585119.1 KEGG: fra:Francci3_0621 hypothetical protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal YP_004585120.1 KEGG: fri:FraEuI1c_6191 hypothetical protein YP_004585122.1 PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: fra:Francci3_0617 glucosamine--fructose-6-phosphate aminotransferase YP_004585123.1 TIGRFAM: Phosphoglucosamine mutase; KEGG: fra:Francci3_0616 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal YP_004585124.1 PFAM: Ribosomal protein S9; KEGG: fal:FRAAL1115 30S ribosomal subunit protein S9 YP_004585125.1 KEGG: fra:Francci3_0614 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13 YP_004585126.1 KEGG: fal:FRAAL1113 hypothetical protein YP_004585127.1 PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: fra:Francci3_0612 tRNA pseudouridine synthase A YP_004585128.1 TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: fal:FRAAL1111 50S ribosomal protein L17; PFAM: Ribosomal protein L17 YP_004585129.1 SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: fre:Franean1_6022 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal YP_004585130.1 TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: RNA-binding S4; Ribosomal protein S4; KEGG: fri:FraEuI1c_6200 ribosomal protein S4; SMART: RNA-binding S4 YP_004585131.1 KEGG: fre:Franean1_6024 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11 YP_004585132.1 KEGG: fal:FRAAL1107 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13 YP_004585133.1 TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: fal:FRAAL1106 50S ribosomal protein L36; PFAM: Ribosomal protein L36 YP_004585134.1 TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: fal:FRAAL1105 translation initiation factor IF-1; PFAM: S1, IF1 type YP_004585135.1 PFAM: Peptidase M24, structural domain; manually curated; KEGG: fal:FRAAL1104 methionine aminopeptidase C (MAP) (peptidase M); TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1 YP_004585136.1 TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: fra:Francci3_0603 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region YP_004585137.1 KEGG: fre:Franean1_6029 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein YP_004585138.1 KEGG: fri:FraEuI1c_6208 ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15 YP_004585139.1 KEGG: fre:Franean1_6031 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region YP_004585140.1 KEGG: fal:FRAAL1098 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal YP_004585141.1 KEGG: fre:Franean1_6033 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5 YP_004585142.1 KEGG: fra:Francci3_0597 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain YP_004585143.1 PFAM: Ribosomal protein S8; KEGG: fre:Franean1_6035 30S ribosomal protein S8 YP_004585144.1 PFAM: Ribosomal protein S14; KEGG: fre:Franean1_6036 30S ribosomal protein S14 YP_004585145.1 PFAM: Ribosomal protein L5; KEGG: fri:FraEuI1c_6215 50S ribosomal protein L5 YP_004585146.1 TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: fal:FRAAL1092 50S ribosomal protein L24; SMART: KOW YP_004585147.1 KEGG: fal:FRAAL1091 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e YP_004585148.1 KEGG: fal:FRAAL1090 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17 YP_004585149.1 KEGG: fra:Francci3_0590 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29 YP_004585150.1 TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: fri:FraEuI1c_6220 ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_004585151.1 TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: fre:Franean1_6043 30S ribosomal protein S3; SMART: K Homology YP_004585152.1 KEGG: fra:Francci3_0587 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17 YP_004585153.1 KEGG: fra:Francci3_0586 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15 YP_004585154.1 KEGG: fre:Franean1_6046 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2 YP_004585155.1 PFAM: Ribosomal protein L25/L23; KEGG: fri:FraEuI1c_6225 ribosomal protein L25/L23 YP_004585156.1 PFAM: Ribosomal protein L4/L1e; KEGG: fra:Francci3_0583 50S ribosomal protein L4 YP_004585157.1 KEGG: fre:Franean1_6049 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3 YP_004585158.1 TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: fre:Franean1_6050 30S ribosomal protein S10; PFAM: Ribosomal protein S10 YP_004585159.1 TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; KEGG: fal:FRAAL1079 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal YP_004585160.1 KEGG: fra:Francci3_0579 elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal YP_004585161.1 KEGG: fri:FraEuI1c_6231 ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7 YP_004585162.1 KEGG: fal:FRAAL1076 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23 YP_004585163.1 PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: ttr:Tter_2695 RNA methylase, NOL1/NOP2/sun family YP_004585165.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: fal:FRAAL0352 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004585166.1 SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: fal:FRAAL1073 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5 YP_004585167.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: fal:FRAAL1072 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7 YP_004585168.1 TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: fre:Franean1_6058 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal YP_004585169.1 KEGG: fal:FRAAL1068 50S ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10 YP_004585170.1 KEGG: fal:FRAAL1066 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1 YP_004585171.1 TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal; KEGG: fal:FRAAL1065 50S ribosomal protein L11; SMART: Ribosomal protein L11 YP_004585172.1 TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KEGG: fre:Franean1_6062 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW YP_004585173.1 KEGG: fri:FraEuI1c_6241 preprotein translocase, SecE subunit; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein YP_004585174.1 KEGG: fre:Franean1_6064 aspartate aminotransferase; PFAM: Aminotransferase, class I/II YP_004585175.1 PFAM: MaoC-like dehydratase; KEGG: fra:Francci3_0565 MaoC-like dehydratase YP_004585176.1 KEGG: fre:Franean1_6066 hypothetical protein YP_004585177.1 TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: fre:Franean1_6067 50S ribosomal protein L33; PFAM: Ribosomal protein L33 YP_004585178.1 PFAM: Glycoside hydrolase, family 25; LGFP; KEGG: fre:Franean1_6068 glycoside hydrolase family protein; SMART: Glycoside hydrolase, family 25 subgroup YP_004585179.1 PFAM: DoxX; KEGG: fra:Francci3_0561 hypothetical protein YP_004585180.1 PFAM: AIG2-like; KEGG: fre:Franean1_6070 AIG2 family protein YP_004585181.1 TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: fal:FRAAL1055 orotate phosphoribosyltransferase (OprT) (oprtase); PFAM: Phosphoribosyltransferase YP_004585182.1 KEGG: fal:FRAAL6417 hypothetical protein YP_004585183.1 KEGG: fre:Franean1_6074 putative nucleotide-binding protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520 YP_004585184.1 KEGG: fra:Francci3_0557 heat shock protein HtpX; HAMAP: protease htpX; PFAM: Peptidase M48, Ste24p YP_004585185.1 PFAM: Domain of unknown function DUF2520; Putative oxidoreductase/dehydrogenase, Rossmann-like domain; KEGG: fri:FraEuI1c_6255 domain of unknown function DUF2520 YP_004585186.1 TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: fal:FRAAL1051 putative oxidoreductase,alpha subunit; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YP_004585187.1 KEGG: fal:FRAAL1050 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_004585188.1 KEGG: fre:Franean1_6079 hypothetical protein YP_004585189.1 KEGG: fra:Francci3_0552 polyprenyl synthetase; PFAM: Polyprenyl synthetase YP_004585190.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; TIGRFAM: NADH-quinone oxidoreductase, chain N; HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; KEGG: fre:Franean1_6081 NADH dehydrogenase subunit N YP_004585191.1 TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: fre:Franean1_6082 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase YP_004585192.1 TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: fre:Franean1_6083 NADH dehydrogenase subunit L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal YP_004585193.1 KEGG: fal:FRAAL1042 NADH dehydrogenase subunit K; HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L YP_004585194.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: fra:Francci3_0547 NADH dehydrogenase subunit J YP_004585195.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP: NADH-quinone oxidoreductase, chain I; KEGG: fre:Franean1_6086 NADH dehydrogenase subunit I YP_004585196.1 HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; KEGG: fra:Francci3_0545 NADH dehydrogenase subunit H; PFAM: NADH:ubiquinone oxidoreductase, subunit 1 YP_004585197.1 TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: fal:FRAAL1038 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase Fe4S4 region; Molybdopterin oxidoreductase YP_004585198.1 TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: fre:Franean1_6089 NADH-quinone oxidoreductase, F subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_004585199.1 TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: fre:Franean1_6090 NADH dehydrogenase subunit E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit YP_004585200.1 PFAM: NADH-quinone oxidoreductase, subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; KEGG: fre:Franean1_6091 NADH dehydrogenase subunit D YP_004585201.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; HAMAP: NAD(P)H-quinone oxidoreductase subunit J; KEGG: fra:Francci3_0540 NADH dehydrogenase subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit YP_004585202.1 PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; KEGG: fre:Franean1_6093 NADH dehydrogenase subunit B YP_004585203.1 KEGG: fri:FraEuI1c_6274 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YP_004585204.1 KEGG: fra:Francci3_0537 geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD dependent oxidoreductase YP_004585205.1 TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: fre:Franean1_6097 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004585206.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: fal:FRAAL1027 adenosine deaminase YP_004585207.1 KEGG: fre:Franean1_6099 radical SAM domain-containing protein; TIGRFAM: menaquinone biosynthesis protein; FO synthase, subunit 2; PFAM: Radical SAM YP_004585208.1 HAMAP: Ferredoxin--NADP reductase; KEGG: fal:FRAAL1022 putative thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004585209.1 PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; KEGG: fri:FraEuI1c_6281 cobalamin (vitamin B12) biosynthesis CbiX protein YP_004585210.1 TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: fre:Franean1_6102 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase YP_004585211.1 TIGRFAM: Phosphoadenosine phosphosulphate reductase CysH-type; KEGG: fre:Franean1_6103 phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulphate reductase YP_004585212.1 KEGG: fre:Franean1_6104 hypothetical protein YP_004585213.1 KEGG: fal:FRAAL1017 putative ferredoxin nitrite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like YP_004585215.1 KEGG: fri:FraEuI1c_6286 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004585216.1 PFAM: Protein of unknown function DUF178; KEGG: fal:FRAAL1013 hypothetical protein YP_004585217.1 KEGG: fra:Francci3_0521 hypothetical protein YP_004585218.1 KEGG: fri:FraEuI1c_6290 hypothetical protein YP_004585219.1 KEGG: fre:Franean1_6111 radical SAM domain-containing protein; TIGRFAM: putative menaquinone biosynthesis protein; FO synthase, subunit 2; PFAM: Radical SAM YP_004585220.1 KEGG: fri:FraEuI1c_7079 DNA binding domain protein, excisionase family; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: HTH transcriptional regulator, MerR YP_004585221.1 KEGG: fre:Franean1_6112 hypothetical protein YP_004585222.1 KEGG: fri:FraEuI1c_6293 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein YP_004585223.1 KEGG: fre:Franean1_6114 prenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related; PFAM: UbiA prenyltransferase YP_004585224.1 KEGG: fre:Franean1_6115 UbiD family decarboxylase; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family; Carboxylyase-related; PFAM: Carboxylyase-related YP_004585225.1 KEGG: fre:Franean1_6116 hypothetical protein YP_004585226.1 KEGG: fra:Francci3_0513 cytochrome c assembly protein; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein YP_004585227.1 PFAM: ResB-like; KEGG: fre:Franean1_6118 ResB family protein YP_004585228.1 PFAM: Cytochrome c assembly protein, transmembrane region; KEGG: fal:FRAAL1002 putative cytochrome c biogenesis membrane protein YP_004585229.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: fre:Franean1_6120 redoxin domain-containing protein YP_004585230.1 KEGG: fal:FRAAL5813 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004585231.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004585232.1 PFAM: Phosphoglycerate mutase; KEGG: fal:FRAAL0998 phosphoglycerate mutase (phosphoglyceromutase) (PgaM) YP_004585233.1 PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: fal:FRAAL0997 glutamate-1-semialdehyde aminotransferase YP_004585234.1 PFAM: Transcriptional regulator PadR N-terminal-like; KEGG: fre:Franean1_6124 PadR-like family transcriptional regulator YP_004585235.1 TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; PFAM: ABC transporter-like; KEGG: fre:Franean1_6125 daunorubicin resistance ABC transporter ATPase subunit; SMART: ATPase, AAA+ type, core YP_004585236.1 KEGG: fre:Franean1_6126 ABC-2 type transporter; manually curated; PFAM: ABC-2 type transporter YP_004585237.1 KEGG: mav:MAV_4730 hypothetical protein YP_004585238.1 KEGG: fri:FraEuI1c_2388 PilT protein domain protein YP_004585241.1 KEGG: fri:FraEuI1c_6309 porphobilinogen synthase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase YP_004585242.1 PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; Tetrapyrrole methylase; KEGG: fal:FRAAL0985 uroporphyrin-III C-methyltransferase YP_004585243.1 TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: fra:Francci3_0485 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal YP_004585244.1 KEGG: fre:Franean1_6132 redox-sensing transcriptional repressor REX; HAMAP: Redox-sensing transcriptional repressor rex; PFAM: CoA-binding; Rex DNA-binding, C-terminal YP_004585245.1 PFAM: Glutaredoxin 2; KEGG: fre:Franean1_6133 glutaredoxin 2 YP_004585246.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004585247.1 KEGG: fal:FRAAL0980 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004585248.1 KEGG: fri:FraEuI1c_6315 HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase YP_004585250.1 KEGG: fra:Francci3_0480 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004585252.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fra:Francci3_0479 NAD-dependent epimerase/dehydratase YP_004585253.1 PFAM: Protein of unknown function DUF1713, mitochondria; KEGG: sro:Sros_0538 hypothetical protein YP_004585254.1 TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: sro:Sros_0533 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent YP_004585255.1 PFAM: Proline dehydrogenase; KEGG: tfu:Tfu_0434 L-proline dehydrogenase YP_004585256.1 PFAM: Methyltransferase type 11; KEGG: fri:FraEuI1c_6320 methyltransferase type 11 YP_004585257.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: fra:Francci3_0473 xylose isomerase-like protein YP_004585258.1 PFAM: Ppx/GppA phosphatase; KEGG: fal:FRAAL0968 putative exopolyphosphatase YP_004585259.1 KEGG: fri:FraEuI1c_6323 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004585260.1 KEGG: fra:Francci3_0470 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004585261.1 KEGG: fre:Franean1_6147 phosphate uptake regulator, PhoU; TIGRFAM: PhoU; PFAM: PhoU YP_004585262.1 PFAM: Phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; KEGG: fre:Franean1_6148 phosphoglyceromutase YP_004585263.1 PFAM: Ferric-uptake regulator; KEGG: fri:FraEuI1c_6328 ferric uptake regulator, Fur family YP_004585264.1 KEGG: fre:Franean1_6150 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel YP_004585265.1 KEGG: fra:Francci3_0466 tetratricopeptide TPR_2 YP_004585266.1 KEGG: fal:FRAAL0960 putative sugar transporter sugar binding protein; manually curated; PFAM: Bacterial extracellular solute-binding, family 1 YP_004585268.1 PFAM: Protein of unknown function DUF349; KEGG: fri:FraEuI1c_6335 protein of unknown function DUF349 YP_004585269.1 KEGG: fri:FraEuI1c_6336 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004585270.1 KEGG: fra:Francci3_0459 hypothetical protein YP_004585271.1 PFAM: Aldo/keto reductase; KEGG: fra:Francci3_0458 aldo/keto reductase YP_004585272.1 KEGG: fra:Francci3_0457 hypothetical protein YP_004585273.1 KEGG: fra:Francci3_0456 glycosyl transferase, group 1; TIGRFAM: Mycothiol biosynthesis protein, MshA; PFAM: Glycosyl transferase, group 1 YP_004585274.1 PFAM: Protein of unknown function DUF2596; KEGG: fal:FRAAL0949 hypothetical protein YP_004585275.1 KEGG: fra:Francci3_0452 hypothetical protein; HAMAP: UPF0678 fatty acid-binding protein-like protein; PFAM: Domain of unknown function DUF1794 YP_004585276.1 manually curated YP_004585277.1 KEGG: fre:Franean1_6166 hypothetical protein YP_004585278.1 KEGG: fre:Franean1_6167 hypothetical protein YP_004585279.1 PFAM: Protein of unknown function DUF1416; KEGG: fre:Franean1_6168 hypothetical protein YP_004585280.1 PFAM: Rhodanese-like; KEGG: fal:FRAAL0943 putative thiosulfate sulfurtransferase (rhodanese-like protein); SMART: Rhodanese-like YP_004585281.1 KEGG: fre:Franean1_6170 hypothetical protein YP_004585282.1 KEGG: fal:FRAAL0941 putative thioredoxin YP_004585283.1 KEGG: fre:Franean1_6173 hypothetical protein YP_004585284.1 PFAM: ThiamineS; KEGG: fal:FRAAL0938 putative molybdopterin converting factor YP_004585286.1 PFAM: Signal transduction response regulator, C-terminal; KEGG: fre:Franean1_6176 winged helix family two component response transcriptional regulator YP_004585287.1 KEGG: fra:Francci3_0442 GCN5-related N-acetyltransferase; TIGRFAM: Mycothiol biosynthesis protein, MshD; PFAM: GCN5-related N-acetyltransferase YP_004585288.1 KEGG: fra:Francci3_4261 two component transcriptional regulator; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004585289.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: fal:FRAAL6532 phosphate transporter ATP-binding protein; PFAM: ABC transporter-like YP_004585290.1 KEGG: fre:Franean1_0354 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004585291.1 KEGG: fra:Francci3_4264 phosphate ABC transporter permease; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004585292.1 KEGG: fra:Francci3_4265 periplasmic phosphate binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1 YP_004585293.1 KEGG: fal:FRAAL0934 putative anti anti-sigma factor; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS YP_004585294.1 KEGG: fri:FraEuI1c_6358 hypothetical protein YP_004585295.1 KEGG: fre:Franean1_6180 hypothetical protein YP_004585296.1 PFAM: SAF domain; KEGG: nca:Noca_0786 SAF domain-containing protein YP_004585297.1 KEGG: fre:Franean1_0686 FmdB family regulatory protein; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative YP_004585298.1 KEGG: fal:FRAAL6398 putative ligase (partial match); TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004585299.1 KEGG: fal:FRAAL6402 hypothetical protein YP_004585300.1 KEGG: fal:FRAAL6401 hypothetical protein YP_004585301.1 KEGG: fra:Francci3_4043 hypothetical protein YP_004585302.1 PFAM: Ferritin/Dps protein; KEGG: sgr:SGR_1765 hypothetical protein YP_004585303.1 PFAM: Ferric-uptake regulator; KEGG: kfl:Kfla_2430 ferric uptake regulator, Fur family YP_004585304.1 PFAM: Penicillinase repressor; KEGG: fal:FRAAL0584 putative transcriptional regulator YP_004585306.1 PFAM: Adenylate cyclase; KEGG: tcu:Tcur_0232 adenylyl cyclase CyaB YP_004585307.1 manually curated; KEGG: fra:Francci3_2131 hypothetical protein YP_004585308.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004585309.1 KEGG: fre:Franean1_5293 stage II sporulation E family protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: Protein phosphatase 2C-related; HAMP linker domain YP_004585310.1 KEGG: fra:Francci3_1560 putative signal transduction histidine kinase; PFAM: GAF; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: GAF YP_004585311.1 KEGG: fal:FRAAL3784 hypothetical protein YP_004585312.1 KEGG: fal:FRAAL3783 putative two-component system response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004585314.1 PFAM: Protein of unknown function DUF2276; KEGG: cyn:Cyan7425_2460 CRISPR-associated protein Cas6 YP_004585316.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004585317.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004585319.1 TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: fra:Francci3_3548 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding YP_004585320.1 KEGG: fra:Francci3_3887 adenylate kinase; HAMAP: Adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region YP_004585321.1 KEGG: fri:FraEuI1c_6367 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase YP_004585322.1 KEGG: fre:Franean1_6187 hypothetical protein YP_004585323.1 TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: fri:FraEuI1c_0541 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_004585324.1 KEGG: fra:Francci3_4039 molybdopterin molybdochelatase; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV YP_004585325.1 KEGG: fre:Franean1_0690 molybdenum cofactor biosynthesis protein MoaC; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; PFAM: Molybdopterin cofactor biosynthesis MoaC region YP_004585326.1 KEGG: fre:Franean1_0691 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding YP_004585327.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fri:FraEuI1c_0545 GCN5-related N-acetyltransferase YP_004585329.1 KEGG: fri:FraEuI1c_0546 hypothetical protein YP_004585330.1 KEGG: gob:Gobs_2513 hypothetical protein YP_004585331.1 KEGG: fra:Francci3_3988 hypothetical protein YP_004585332.1 KEGG: cwo:Cwoe_1209 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004585334.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: stp:Strop_2012 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase YP_004585335.1 KEGG: amd:AMED_5835 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004585336.1 KEGG: fri:FraEuI1c_4776 dual specificity protein phosphatase YP_004585337.1 PFAM: Peptidoglycan binding-like; KEGG: fri:FraEuI1c_3363 peptidoglycan-binding domain 1 protein YP_004585338.1 KEGG: fal:FRAAL4653 putative transposase (partial) YP_004585340.1 KEGG: fre:Franean1_5209 monovalent cation/proton antiporter, MnhG/PhaG subunit YP_004585341.1 KEGG: ske:Sked_28530 hypothetical protein YP_004585342.1 KEGG: req:REQ_19170 translation initiation factor 2 InfB YP_004585343.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004585344.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004585345.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004585346.1 KEGG: lbc:LACBIDRAFT_175463 hypothetical protein; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type YP_004585347.1 KEGG: fre:Franean1_6629 hypothetical protein YP_004585348.1 TIGRFAM: Prevent-host-death protein; KEGG: fra:Francci3_4108 prevent-host-death protein YP_004585349.1 PFAM: PilT protein, N-terminal; KEGG: fra:Francci3_4109 PilT protein-like protein YP_004585350.1 TIGRFAM: Prevent-host-death protein; KEGG: fal:FRAAL0553 hypothetical protein YP_004585351.1 PFAM: PilT protein, N-terminal; KEGG: fal:FRAAL0552 hypothetical protein YP_004585353.1 PFAM: DNA methylase, adenine-specific; KEGG: fre:Franean1_2033 N-6 DNA methylase YP_004585354.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: fre:Franean1_2033 N-6 DNA methylase YP_004585355.1 PFAM: AMP-dependent synthetase/ligase; KEGG: fre:Franean1_6630 hypothetical protein YP_004585356.1 PFAM: Transposase, IS204/IS1001/IS1096/IS1165; KEGG: fra:Francci3_3732 transposase, IS204/IS1001/IS1096/IS1165 YP_004585357.1 KEGG: bge:BC1002_0659 filamentation induced by cAMP protein Fic YP_004585358.1 KEGG: fre:Franean1_6615 plasmid pRiA4b ORF-3 family protein; manually curated; PFAM: Plasmid pRiA4b ORF-3-like YP_004585359.1 PFAM: Methyltransferase type 11; KEGG: fre:Franean1_6644 methyltransferase type 11 YP_004585360.1 KEGG: fra:Francci3_0235 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004585361.1 KEGG: fra:Francci3_0234 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004585362.1 PFAM: ApbE-like lipoprotein; KEGG: fra:Francci3_0233 ApbE-like lipoprotein YP_004585363.1 PFAM: FMN-binding; KEGG: fre:Franean1_6590 FMN-binding domain-containing protein YP_004585364.1 PFAM: Ferric reductase-like transmembrane component, N-terminal; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; KEGG: fra:Francci3_0231 oxidoreductase FAD/NAD(P)-binding YP_004585367.1 KEGG: sro:Sros_5450 HemK family modification methylase; TIGRFAM: putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific; Modification methylase HemK; PFAM: Methyltransferase small YP_004585368.1 KEGG: fri:FraEuI1c_6899 hypothetical protein YP_004585370.1 KEGG: fre:Franean1_6654 hypothetical protein YP_004585371.1 KEGG: fra:Francci3_0225 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-like protein YP_004585372.1 KEGG: fra:Francci3_0224 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004585373.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: fri:FraEuI1c_6906 DegT/DnrJ/EryC1/StrS aminotransferase YP_004585375.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fra:Francci3_0222 alpha/beta hydrolase YP_004585376.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rop:ROP_55020 putative MFS transporter YP_004585377.1 KEGG: fri:FraEuI1c_6773 regulatory protein, FmdB family; manually curated; TIGRFAM: Regulatory protein, FmdB, putative YP_004585378.1 KEGG: fri:FraEuI1c_4705 phosphofructokinase; PFAM: Phosphofructokinase YP_004585379.1 KEGG: fal:FRAAL0362 putative integral membrane protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related YP_004585380.1 KEGG: fra:Francci3_3406 ATPase; PFAM: ATPase, AAA-type, core; GCN5-related N-acetyltransferase; SMART: ATPase, AAA+ type, core YP_004585381.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004585383.1 PFAM: Transcription factor WhiB; KEGG: fri:FraEuI1c_0804 transcription factor WhiB YP_004585384.1 KEGG: fal:FRAAL2813 hypothetical protein YP_004585386.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: LmbE family protein YP_004585387.1 PFAM: ABC transporter-like; KEGG: fra:Francci3_0382 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004585388.1 PFAM: Bacterial inner-membrane translocator; KEGG: fra:Francci3_0381 inner-membrane translocator YP_004585389.1 KEGG: fra:Francci3_0380 ABC-type branched-chain amino acid transport systems periplasmic component-like protein YP_004585390.1 KEGG: fra:Francci3_2480 hypothetical protein YP_004585391.1 PFAM: ABC-3; KEGG: fri:FraEuI1c_7116 ABC-3 protein YP_004585392.1 PFAM: ABC-3; KEGG: fri:FraEuI1c_7115 ABC-3 protein YP_004585393.1 PFAM: ABC transporter-like; KEGG: fri:FraEuI1c_7114 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004585394.1 PFAM: ABC transporter metal-binding lipoprotein; KEGG: fal:FRAAL0163 manganese ABC transporter YP_004585395.1 KEGG: sro:Sros_5602 hypothetical protein; TIGRFAM: F420-binding domain, putative; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004585396.1 KEGG: fal:FRAAL6450 putative short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004585397.1 PFAM: Helix-turn-helix, HxlR type; KEGG: sco:SCO2201 hypothetical protein YP_004585398.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; Chalcone/stilbene synthase, N-terminal; KEGG: svi:Svir_20410 predicted naringenin-chalcone synthase YP_004585399.1 PFAM: Monooxygenase, FAD-binding; KEGG: mmi:MMAR_2987 3-(3-hydroxyphenyl)propionate hydroxylase YP_004585400.1 KEGG: nml:Namu_3665 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 YP_004585401.1 KEGG: fra:Francci3_4464 cytochrome P450; PFAM: Cytochrome P450 YP_004585403.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: gob:Gobs_2310 NADP oxidoreductase coenzyme F420-dependent YP_004585404.1 TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; PAS fold; GAF; ATP-binding region, ATPase-like; KEGG: scb:SCAB_7111 hypothetical protein; SMART: Protein phosphatase 2C-related; GAF; PAS YP_004585405.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mav:MAV_1846 hydrolase, alpha/beta fold family protein YP_004585406.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: bfa:Bfae_00150 phytanoyl-CoA dioxygenase (PhyH) YP_004585407.1 KEGG: fre:Franean1_6416 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004585408.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fal:FRAAL2793 hypothetical protein YP_004585409.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: fre:Franean1_6773 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004585411.1 PFAM: Protein of unknown function DUF427; KEGG: rxy:Rxyl_0283 hypothetical protein YP_004585412.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: bxe:Bxe_A0787 ABC oligopeptide/dipeptide transporter, fused ATPase subunits; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal YP_004585413.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fra:Francci3_0186 binding-protein-dependent transport systems inner membrane component YP_004585414.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fra:Francci3_0186 binding-protein-dependent transport systems inner membrane component YP_004585415.1 KEGG: rca:Rcas_4309 phosphotransferase domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal YP_004585416.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004585417.1 TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; KEGG: fal:FRAAL0277 acid phosphatase SurE, survival protein; PFAM: Survival protein SurE-like phosphatase/nucleotidase YP_004585418.1 KEGG: fri:FraEuI1c_6741 YVTN beta-propeller repeat-containing protein YP_004585420.1 PFAM: Major facilitator superfamily MFS-1; KEGG: cwo:Cwoe_1486 drug resistance transporter, EmrB/QacA subfamily YP_004585421.1 KEGG: fri:FraEuI1c_4579 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004585422.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fri:FraEuI1c_4739 major facilitator superfamily MFS_1 YP_004585423.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fri:FraEuI1c_4740 regulatory protein TetR YP_004585424.1 KEGG: fra:Francci3_1244 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004585425.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; KEGG: fra:Francci3_1243 TetR family transcriptional regulator YP_004585426.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sro:Sros_3360 putative transcriptional regulator, TetR family YP_004585427.1 KEGG: sro:Sros_3361 NmrA family protein YP_004585428.1 manually curated; KEGG: fre:Franean1_7094 putative transposase YP_004585429.1 PFAM: Phosphoesterase; KEGG: fra:Francci3_0739 phosphatidylinositol-3-phosphate phosphatase YP_004585430.1 PFAM: ABC transporter-like; KEGG: gob:Gobs_3912 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004585431.1 KEGG: fal:FRAAL5714 putative glutamate binding protein of ABC transporter system; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3 YP_004585432.1 KEGG: saq:Sare_1393 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004585433.1 KEGG: stp:Strop_1428 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004585434.1 KEGG: fre:Franean1_0720 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_004585435.1 PFAM: ROK; KEGG: fra:Francci3_0253 ROK YP_004585440.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL6466 ABC-type transport systems, involved in lipoprotein release, ATPase components; SMART: ATPase, AAA+ type, core YP_004585441.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: fal:FRAAL6467 ABC transporter permease protein YP_004585443.1 KEGG: fal:FRAAL6470 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_004585444.1 KEGG: fra:Francci3_1063 carnitine O-acetyltransferase; PFAM: Acyltransferase ChoActase/COT/CPT YP_004585445.1 KEGG: sen:SACE_3160 hypothetical protein YP_004585446.1 KEGG: msm:MSMEG_6747 oxidoreductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004585447.1 KEGG: sma:SAV_4778 hypothetical protein YP_004585448.1 KEGG: cai:Caci_2470 hypothetical protein YP_004585449.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: nfa:pnf1300 hypothetical protein YP_004585450.1 PFAM: Protein of unknown function DUF162; KEGG: nda:Ndas_2595 protein of unknown function DUF162 YP_004585451.1 PFAM: Cysteine-rich region, CCG; KEGG: gbr:Gbro_2898 hypothetical protein YP_004585452.1 KEGG: fre:Franean1_0371 hypothetical protein YP_004585453.1 SMART: Protein phosphatase 2C-related; KEGG: fal:FRAAL6518 hypothetical protein YP_004585454.1 KEGG: fre:Franean1_0368 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_004585455.1 KEGG: fri:FraEuI1c_0384 forkhead-associated protein; PFAM: Forkhead-associated; SMART: Forkhead-associated YP_004585457.1 TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: fal:FRAAL6521 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal YP_004585458.1 KEGG: fre:Franean1_0365 pyridoxamine 5'-phosphate oxidase-related FMN-binding; TIGRFAM: F420-binding domain, putative; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004585459.1 TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: fre:Franean1_0364 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core YP_004585460.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: fra:Francci3_4254 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004585461.1 PFAM: Transcription factor CarD; KEGG: fre:Franean1_0362 CarD family transcriptional regulator YP_004585463.1 KEGG: ace:Acel_0077 hypothetical protein YP_004585464.1 PFAM: DR1885-like metal-binding protein; KEGG: fre:Franean1_0360 putative lipoprotein YP_004585465.1 manually curated; TIGRFAM: DNA repair protein RadA; KEGG: fal:FRAAL6528 DNA repair protein RadA; SMART: ATPase, AAA+ type, core YP_004585466.1 KEGG: fal:FRAAL6529 DNA integrity scanning protein DisA; HAMAP: DNA integrity scanning protein disA; PFAM: DNA integrity scanning, DisA, linker region; DNA integrity scanning protein, DisA, N-terminal; Helix-hairpin-helix motif YP_004585467.1 KEGG: fal:FRAAL6530 A/G-specific adenine glycosylase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain YP_004585468.1 KEGG: fre:Franean1_0349 hypothetical protein YP_004585469.1 PFAM: Anticodon-binding; Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; TIGRFAM: Prolyl-tRNA synthetase, class IIa, prokaryotic-type; HAMAP: Prolyl-tRNA synthetase, class IIa, prokaryotic-type; KEGG: fre:Franean1_0348 prolyl-tRNA synthetase YP_004585470.1 KEGG: fal:FRAAL0499 hypothetical protein YP_004585472.1 KEGG: fre:Franean1_1302 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004585474.1 PFAM: Ion transport 2; KEGG: sco:SCO6330 hypothetical protein YP_004585475.1 manually curated; KEGG: fre:Franean1_4461 putative transposase YP_004585476.1 KEGG: rha:RHA1_ro08020 transposase YP_004585477.1 TIGRFAM: helicase/secretion neighborhood putative DEAH-box helicase; PFAM: Protein of unknown function DUF1998; DNA/RNA helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; KEGG: fri:FraEuI1c_0322 DEAD/DEAH box helicase domain protein; SMART: DNA/RNA helicase, C-terminal YP_004585479.1 KEGG: fre:Franean1_3164 hypothetical protein YP_004585480.1 KEGG: fre:Franean1_0315 TadE family protein YP_004585481.1 KEGG: fri:FraEuI1c_0326 hypothetical protein YP_004585482.1 PFAM: Type II secretion system F domain; KEGG: fri:FraEuI1c_0327 type II secretion system F domain protein YP_004585483.1 PFAM: Collagen triple helix repeat; KEGG: fre:Franean1_0317 type II secretion system protein YP_004585484.1 KEGG: scb:SCAB_41161 type II secretion system protein; TIGRFAM: helicase/secretion neighborhood ATPase; PFAM: Type II secretion system protein E YP_004585485.1 TIGRFAM: helicase/secretion neighborhood CpaE-like protein; KEGG: mil:ML5_0408 hypothetical protein YP_004585486.1 KEGG: fal:FRAAL6564 hypothetical protein YP_004585487.1 KEGG: fra:Francci3_4294 hypothetical protein YP_004585488.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fra:Francci3_4293 alpha/beta hydrolase YP_004585489.1 PFAM: Colicin V production protein; Peptidase S1/S6, chymotrypsin/Hap; KEGG: fra:Francci3_4292 colicin V production protein YP_004585490.1 PFAM: Blue (type 1) copper domain; KEGG: fri:FraEuI1c_0333 blue (type 1) copper domain protein YP_004585491.1 PFAM: NUDIX hydrolase domain; KEGG: fra:Francci3_4290 NUDIX hydrolase YP_004585492.1 SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: fre:Franean1_0326 endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif YP_004585493.1 manually curated; KEGG: fra:Francci3_4287 hypothetical protein YP_004585494.1 manually curated; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; KEGG: fre:Franean1_0328 Crp/FNR family transcriptional regulator; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp YP_004585495.1 KEGG: fra:Francci3_4285 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide repeat YP_004585496.1 KEGG: fal:FRAAL6554 putative hydrolase YP_004585497.1 PFAM: Endoribonuclease L-PSP; KEGG: fra:Francci3_4282 endoribonuclease L-PSP YP_004585498.1 KEGG: fra:Francci3_4281 hypothetical protein YP_004585499.1 PFAM: ATPase, anion-transporting; KEGG: fal:FRAAL6550 putative ion-transporting ATPase YP_004585500.1 PFAM: ATPase, anion-transporting; KEGG: fri:FraEuI1c_0344 putative anion-transporting ATPase YP_004585501.1 PFAM: Transcription factor WhiB; KEGG: fal:FRAAL6548 WhiB family cell cycle control transcriptional regulator YP_004585502.1 KEGG: fre:Franean1_0337 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; PASTA; SMART: PASTA YP_004585503.1 KEGG: fri:FraEuI1c_0347 hypothetical protein YP_004585504.1 KEGG: fra:Francci3_4275 metallophosphoesterase; manually curated; PFAM: Metallophosphoesterase YP_004585506.1 KEGG: syf:Synpcc7942_0762 hypothetical protein YP_004585507.1 KEGG: fal:FRAAL1364 hypothetical protein YP_004585508.1 PFAM: Protein of unknown function DUF574; KEGG: fri:FraEuI1c_1924 protein of unknown function DUF574 YP_004585509.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004585510.1 KEGG: fra:Francci3_4302 anti-sigma-factor antagonist domain-containing protein; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS YP_004585511.1 KEGG: fri:FraEuI1c_0320 hypothetical protein YP_004585513.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: Inorganic H+ pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; KEGG: fre:Franean1_0310 membrane-bound proton-translocating pyrophosphatase YP_004585514.1 SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: fre:Franean1_0309 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain YP_004585515.1 PFAM: Thymidylate kinase-like; Major facilitator superfamily MFS-1; TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: fra:Francci3_4306 thymidylate kinase YP_004585516.1 KEGG: fal:FRAAL6581 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; SMART: ATPase, AAA+ type, core YP_004585517.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: fri:FraEuI1c_0123 3-oxoacyl-(acyl-carrier-protein) synthase III YP_004585518.1 KEGG: fre:Franean1_6524 hypothetical protein YP_004585519.1 KEGG: fre:Franean1_4111 Mg2 transporter protein CorA family protein; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like YP_004585520.1 KEGG: fal:FRAAL0642 hypothetical protein YP_004585521.1 KEGG: ami:Amir_5420 4-hydroxybenzoate 3-monooxygenase; PFAM: Monooxygenase, FAD-binding YP_004585522.1 PFAM: NLP/P60; KEGG: fra:Francci3_0285 NLP/P60 YP_004585523.1 KEGG: fre:Franean1_6529 hypothetical protein YP_004585524.1 KEGG: sgr:SGR_2569 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004585525.1 PFAM: CobB/CobQ-like glutamine amidotransferase; KEGG: fre:Franean1_6530 glutamine amidotransferase YP_004585526.1 PFAM: Domain of unknown function DUF1727; Mur ligase, central; KEGG: fal:FRAAL0637 UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase) YP_004585527.1 KEGG: fre:Franean1_6532 hypothetical protein YP_004585528.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: fal:FRAAL0635 tRNA-specific adenosine deaminase YP_004585529.1 PFAM: Integrase, catalytic core, phage; KEGG: fri:FraEuI1c_6863 integrase family protein YP_004585530.1 TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: fri:FraEuI1c_6862 DNA binding domain protein, excisionase family YP_004585531.1 KEGG: saq:Sare_1212 putative phiRv2 prophage protein YP_004585532.1 PFAM: DNA primase/polymerase, bifunctional, N-terminal; KEGG: fra:Francci3_1201 hypothetical protein YP_004585534.1 KEGG: mpa:MAP0068 single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004585538.1 PFAM: NUDIX hydrolase domain; KEGG: amd:AMED_6169 DNA hydrolase YP_004585546.1 KEGG: pgu:PGUG_00942 hypothetical protein YP_004585547.1 PFAM: Cell divisionFtsK/SpoIIIE; KEGG: scb:SCAB_56191 plasmid protein YP_004585548.1 KEGG: fre:Franean1_6268 hypothetical protein YP_004585549.1 KEGG: fri:FraEuI1c_6853 hypothetical protein YP_004585554.1 KEGG: tcu:Tcur_3948 hypothetical protein YP_004585555.1 manually curated; PFAM: HTH transcriptional regulator, GntR; KEGG: bpa:BPP2611 GntR family regulatory protein; SMART: HTH transcriptional regulator, GntR YP_004585556.1 PFAM: Isochorismatase-like; KEGG: saq:Sare_1936 isochorismatase hydrolase YP_004585557.1 KEGG: fre:Franean1_6535 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase YP_004585558.1 KEGG: fal:FRAAL6660 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase YP_004585559.1 KEGG: fra:Francci3_4369 hypothetical protein YP_004585560.1 PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: fal:FRAAL6663 phosphoribosylamine--glycine ligase YP_004585561.1 TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: fra:Francci3_4371 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004585562.1 TIGRFAM: Adenylosuccinate lyase; KEGG: sen:SACE_7153 adenylosuccinate lyase; PFAM: Fumarate lyase; Adenylosuccinate lyase, C-terminal YP_004585563.1 KEGG: fal:FRAAL6667 phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase); manually curated; TIGRFAM: SAICAR synthetase; PFAM: SAICAR synthetase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004585564.1 PFAM: Pantoate-beta-alanine ligase; manually curated; TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; KEGG: fri:FraEuI1c_0172 pantoate/beta-alanine ligase; HAMAP: Pantoate-beta-alanine ligase YP_004585565.1 PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: fre:Franean1_0199 aspartate alpha-decarboxylase YP_004585566.1 TIGRFAM: L-aspartate oxidase; KEGG: fal:FRAAL6672 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal YP_004585567.1 TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: fra:Francci3_4378 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_004585568.1 PFAM: Bordetella pertussis Bvg accessory factor; TIGRFAM: Bordetella pertussis Bvg accessory factor; HAMAP: Type III pantothenate kinase; KEGG: fal:FRAAL6674 pantothenate kinase YP_004585569.1 KEGG: fra:Francci3_0966 hypothetical protein YP_004585570.1 PFAM: Glycosyl transferase, family 2; KEGG: fal:FRAAL1596 putative glycosyl transferase (partial match) YP_004585571.1 KEGG: fal:FRAAL1595 putative Sco1/SenC family protein; putative signal peptide YP_004585572.1 KEGG: fal:FRAAL1594 hypothetical protein YP_004585573.1 KEGG: fal:FRAAL1593 putative galactose oxidase; PFAM: Domain of unknown function DUF1929; PA14; Kelch repeat type 1; SMART: PA14 YP_004585574.1 KEGG: fra:Francci3_0964 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; GtrA-like protein YP_004585576.1 KEGG: fal:FRAAL5560 ethanolamine ammonia-lyase, large subunit; PFAM: Ethanolamine ammonia lyase large subunit YP_004585577.1 KEGG: fra:Francci3_4055 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase YP_004585579.1 KEGG: fre:Franean1_0191 hypothetical protein YP_004585580.1 KEGG: fre:Franean1_0190 ATPase; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core YP_004585581.1 PFAM: Metallophosphoesterase; KEGG: fra:Francci3_4384 metallophosphoesterase YP_004585582.1 KEGG: fal:FRAAL2813 hypothetical protein YP_004585583.1 KEGG: fre:Franean1_0188 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related YP_004585584.1 KEGG: fal:FRAAL0230 hypothetical protein YP_004585585.1 KEGG: fal:FRAAL0229 hypothetical protein YP_004585586.1 KEGG: rcu:RCOM_1583660 protein binding protein, putative; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_004585587.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004585588.1 manually curated; KEGG: fre:Franean1_3164 hypothetical protein YP_004585589.1 KEGG: fal:FRAAL0225 putative ATP-dependent RNA helicase YP_004585590.1 KEGG: fal:FRAAL0223 putative sporulation protein (partial match) YP_004585591.1 KEGG: fal:FRAAL0220 putative reductase radical activating protein YP_004585592.1 KEGG: fal:FRAAL0219 hypothetical protein YP_004585594.1 KEGG: fra:Francci3_4387 putative integral membrane protein YP_004585595.1 KEGG: fra:Francci3_4388 hypothetical protein YP_004585596.1 KEGG: fal:FRAAL6692 hypothetical protein YP_004585597.1 KEGG: fre:Franean1_0182 hypothetical protein YP_004585598.1 KEGG: fre:Franean1_0181 hypothetical protein YP_004585599.1 KEGG: fal:FRAAL6696 hypothetical protein YP_004585600.1 KEGG: fre:Franean1_0179 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; Trehalose-phosphatase; PFAM: Trehalose-phosphatase YP_004585601.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004585602.1 KEGG: fra:Francci3_4395 alpha,alpha-trehalose-phosphate synthase; PFAM: Glycosyl transferase, family 20 YP_004585603.1 manually curated; KEGG: fra:Francci3_2915 hypothetical protein YP_004585604.1 PFAM: Protein of unknown function DUF2029; KEGG: fre:Franean1_4234 sugar transporter superfamily protein YP_004585605.1 PFAM: HAD superfamily hydrolase-like, type 3; KEGG: fre:Franean1_0177 hydrolase YP_004585606.1 manually curated YP_004585607.1 PFAM: Glycosyl transferase, family 2; KEGG: sro:Sros_3452 putative glucosyl-3-phosphoglycerate synthase YP_004585608.1 TIGRFAM: Threonine synthase; KEGG: fre:Franean1_0176 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_004585609.1 PFAM: Transposase, IS4-like; KEGG: fre:Franean1_6322 transposase IS4 family protein YP_004585612.1 KEGG: cme:CMN088C hypothetical protein, conserved YP_004585614.1 TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: fra:Francci3_4398 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1 YP_004585615.1 PFAM: Protein of unknown function DUF2510; Scramblase; KEGG: fre:Franean1_3844 scramblase family protein YP_004585616.1 PFAM: Protein of unknown function DUF820; KEGG: fre:Franean1_0174 hypothetical protein YP_004585617.1 KEGG: fra:Francci3_4400 helicase-like protein; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004585618.1 KEGG: fre:Franean1_0172 hypothetical protein YP_004585619.1 KEGG: fra:Francci3_4402 hypothetical protein YP_004585620.1 KEGG: dre:337158 collagen, type I, alpha 1a YP_004585621.1 PFAM: Glycosyl transferase, family 2; GtrA-like protein; KEGG: fal:FRAAL4856 putative dolichyl-phosphate beta-glucosyltransferase YP_004585622.1 KEGG: fra:Francci3_0069 peptidase S1 and S6, chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF YP_004585623.1 KEGG: fre:Franean1_7240 putative RNA polymerase sigma factor YP_004585624.1 PFAM: Copper resistance protein CopC, core; Copper resistance D; KEGG: fre:Franean1_7241 copper resistance protein CopC YP_004585625.1 KEGG: fre:Franean1_7244 hypothetical protein YP_004585626.1 KEGG: fre:Franean1_7243 hypothetical protein YP_004585627.1 PFAM: GLE1, N-terminal, bacteria; KEGG: fre:Franean1_7242 nuclear export factor GLE1 YP_004585628.1 PFAM: Molybdenum cofactor sulfurase, C-terminal; KEGG: fri:FraEuI1c_7106 MOSC domain containing protein YP_004585629.1 KEGG: fra:Francci3_0066 hypothetical protein YP_004585630.1 KEGG: fri:FraEuI1c_7111 hypothetical protein YP_004585632.1 KEGG: fri:FraEuI1c_7110 hypothetical protein YP_004585633.1 KEGG: fre:Franean1_7251 hypothetical protein YP_004585634.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: fre:Franean1_7252 OmpA/MotB domain-containing protein YP_004585636.1 PFAM: ABC transporter-like; KEGG: fal:FRAAL0081 manganese transport system ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004585637.1 KEGG: fra:Francci3_0064 aminotransferase AlaT; PFAM: Aminotransferase, class I/II YP_004585638.1 PFAM: Ferric-uptake regulator; KEGG: fre:Franean1_7263 ferric uptake regulator family protein YP_004585639.1 TIGRFAM: Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted; KEGG: fri:FraEuI1c_7122 putative F420-dependent oxidoreductase YP_004585640.1 KEGG: fri:FraEuI1c_7123 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: Dehydrogenase, E1 component YP_004585641.1 KEGG: fre:Franean1_7268 transketolase central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal YP_004585642.1 KEGG: fre:Franean1_7269 dehydrogenase catalytic domain-containing protein; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding YP_004585643.1 KEGG: fre:Franean1_7270 hypothetical protein YP_004585644.1 PFAM: Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: fra:Francci3_0053 acyl-CoA dehydrogenase-like protein YP_004585645.1 KEGG: fre:Franean1_7273 hypothetical protein YP_004585646.1 KEGG: fre:Franean1_7278 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide TPR-4; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase YP_004585647.1 KEGG: fra:Francci3_0047 hypothetical protein YP_004585649.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: fra:Francci3_0046 anti-sigma-factor antagonist domain-containing protein YP_004585650.1 HAMAP: Phosphoglucose isomerase (PGI); KEGG: fre:Franean1_7286 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI) YP_004585651.1 PFAM: NHL repeat; KEGG: fra:Francci3_0044 serine/threonine protein kinase YP_004585652.1 PFAM: Serine/threonine-protein kinase-like domain; NHL repeat; KEGG: fre:Franean1_7288 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004585654.1 PFAM: NLP/P60; Lytic transglycosylase-like, catalytic; KEGG: fra:Francci3_0041 NLP/P60 YP_004585655.1 KEGG: fre:Franean1_7291 hypothetical protein YP_004585656.1 TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: fal:FRAAL0043 hypothetical protein YP_004585657.1 KEGG: fra:Francci3_0039 hypothetical protein YP_004585658.1 KEGG: fre:Franean1_7294 hypothetical protein YP_004585659.1 KEGG: fri:FraEuI1c_7144 hypothetical protein YP_004585660.1 KEGG: fri:FraEuI1c_7145 hypothetical protein YP_004585661.1 KEGG: fri:FraEuI1c_7146 putative integral membrane protein YP_004585662.1 KEGG: fre:Franean1_7298 type IV secretory pathway VirB4 protein-like protein YP_004585663.1 manually curated; KEGG: fal:FRAAL1560 hypothetical protein YP_004585664.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: amd:AMED_7583 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004585665.1 KEGG: amd:AMED_7584 hypothetical protein YP_004585666.1 KEGG: lbz:LbrM34_V2.0540 proteophosphoglycan ppg4 YP_004585667.1 KEGG: fre:Franean1_3741 hypothetical protein YP_004585668.1 KEGG: fre:Franean1_6646 hypothetical protein YP_004585669.1 PFAM: NERD; KEGG: fra:Francci3_4510 hypothetical protein YP_004585670.1 KEGG: fri:FraEuI1c_6653 glutamate/cysteine ligase family protein; TIGRFAM: Glutamate--cysteine ligase, GsaH-related; PFAM: Glutamate--cysteine ligase, GCS2 YP_004585671.1 KEGG: fre:Franean1_7301 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor YP_004585672.1 TIGRFAM: Conserved hypothetical protein CHP03442; KEGG: fra:Francci3_4513 hypothetical protein YP_004585673.1 KEGG: fre:Franean1_7303 hypothetical protein; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260 YP_004585674.1 PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: fre:Franean1_7305 dihydroxy-acid dehydratase YP_004585675.1 KEGG: fre:Franean1_7306 hypothetical protein YP_004585676.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: fal:FRAAL6846 hypothetical protein YP_004585679.1 KEGG: fal:FRAAL6593 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004585682.1 KEGG: gbr:Gbro_4714 hypothetical protein YP_004585683.1 KEGG: fre:Franean1_2370 alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase YP_004585684.1 KEGG: svi:Svir_18120 RNA polymerase, sigma subunit, ECF family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004585686.1 KEGG: fal:FRAAL1710 putative ATP/GTP binding protein YP_004585687.1 KEGG: fri:FraEuI1c_7162 replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal YP_004585688.1 TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: fra:Francci3_4519 50S ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal YP_004585689.1 TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: fri:FraEuI1c_7164 ribosomal protein S18; PFAM: Ribosomal protein S18 YP_004585690.1 KEGG: fri:FraEuI1c_7165 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004585691.1 TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: fra:Francci3_4522 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_004585693.1 KEGG: fra:Francci3_2590 putative phosphoesterase YP_004585694.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004585695.1 KEGG: fre:Franean1_7313 hypothetical protein YP_004585696.1 KEGG: fre:Franean1_7314 putative transmembrane protein YP_004585697.1 KEGG: fre:Franean1_7315 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase YP_004585698.1 KEGG: fra:Francci3_4527 hypothetical protein YP_004585699.1 PFAM: Transcriptional regulator PadR N-terminal-like; KEGG: fal:FRAAL6859 hypothetical protein YP_004585700.1 KEGG: fre:Franean1_7318 myo-inositol-1-phosphate synthase; TIGRFAM: Myo-inositol 1-phosphate synthase, actinobacteria; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH-like YP_004585701.1 manually curated; KEGG: fre:Franean1_2935 hypothetical protein YP_004585702.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fal:FRAAL6861 hypothetical protein YP_004585703.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: tRNA adenylyltransferase; HDIG; KEGG: fal:FRAAL6862 RNA nucleotidyltransferase; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain YP_004585704.1 PFAM: NUDIX hydrolase domain; KEGG: fri:FraEuI1c_7187 NUDIX hydrolase YP_004585705.1 KEGG: fra:Francci3_4532 hypothetical protein YP_004585706.1 KEGG: fre:Franean1_7324 integral membrane protein MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN YP_004585707.1 SMART: Serine/threonine-protein kinase domain; KEGG: fre:Franean1_7325 serine/threonine protein kinase YP_004585708.1 KEGG: fra:Francci3_4535 hypothetical protein YP_004585709.1 TIGRFAM: Thioredoxin reductase; KEGG: fra:Francci3_4536 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004585710.1 KEGG: fre:Franean1_7329 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain YP_004585711.1 KEGG: fre:Franean1_7330 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan binding-like; SMART: Cell wall hydrolase/autolysin, catalytic YP_004585712.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fre:Franean1_7331 hypothetical protein YP_004585713.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: fre:Franean1_7332 ParB-like partition protein; SMART: ParB-like nuclease YP_004585714.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: fre:Franean1_7333 cobyrinic acid ac-diamide synthase YP_004585715.1 TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: fri:FraEuI1c_7200 methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G YP_004585716.1 KEGG: fre:Franean1_4128 uridine kinase YP_004585717.1 KEGG: vpo:Kpol_1037p34 Tkp1 protein; PFAM: Integrase, catalytic core YP_004585718.1 KEGG: sce:YDR210C-D Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes; PFAM: Reverse transcriptase, RNA-dependent DNA polymerase YP_004595131.1 KEGG: xce:Xcel_3411 hypothetical protein YP_004595134.1 KEGG: stp:Strop_0070 hypothetical protein YP_004595135.1 KEGG: mil:ML5_1658 hypothetical protein YP_004595136.1 KEGG: amd:AMED_0360 single-strand DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004595141.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: gvi:glr2463 hypothetical protein