-- dump date   	20120504_144956
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_003845810.1	TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: slt:Slit_0001 chromosomal replication initiator protein DnaA; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase
YP_003845811.1	SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: slt:Slit_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain
YP_003845812.1	SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: slt:Slit_0003 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein
YP_003845813.1	PFAM: HpcH/HpaI aldolase; KEGG: HpcH/HpaI aldolase
YP_003845814.1	PFAM: MaoC domain protein dehydratase; KEGG: MaoC domain protein dehydratase
YP_003845815.1	manually curated; KEGG: mmb:Mmol_0753 citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase
YP_003845816.1	KEGG: mmb:Mmol_0754 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH
YP_003845817.1	PFAM: HpcH/HpaI aldolase; KEGG: mmb:Mmol_0762 HpcH/HpaI aldolase
YP_003845818.1	PFAM: AMP-dependent synthetase and ligase; KEGG: AMP-dependent synthetase and ligase
YP_003845819.1	PFAM: Glutathione S-transferase domain; KEGG: slt:Slit_1995 glutathione S-transferase domain protein
YP_003845820.1	SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: carboxyl-terminal protease; PFAM: peptidase S41; Peptidase S41A, C-terminal peptidase-1-like; PDZ/DHR/GLGF domain protein
YP_003845821.1	KEGG: slt:Slit_2149 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein
YP_003845822.1	PFAM: Protein of unknown function DUF2257; KEGG: slt:Slit_1170 protein of unknown function DUF2257
YP_003845823.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold-3 domain protein; KEGG: slt:Slit_1666 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003845824.1	KEGG: slt:Slit_0544 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003845825.1	KEGG: lhk:LHK_00064 CheY-like receiver; PFAM: response regulator receiver; Tetratricopeptide TPR_1 repeat-containing protein; SMART: response regulator receiver; Tetratricopeptide repeat
YP_003845826.1	KEGG: sde:Sde_1855 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_003845827.1	SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: slt:Slit_0004 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein
YP_003845828.1	PFAM: protein of unknown function DUF494; KEGG: slt:Slit_0005 protein of unknown function DUF494
YP_003845829.1	KEGG: slt:Slit_0006 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein
YP_003845830.1	PFAM: Peptidoglycan-binding lysin domain; KEGG: slt:Slit_0007 peptidoglycan-binding lysin domain protein
YP_003845831.1	manually curated; TIGRFAM: peptide deformylase; KEGG: slt:Slit_0008 peptide deformylase; PFAM: formylmethionine deformylase
YP_003845832.1	KEGG: slt:Slit_0009 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein
YP_003845833.1	KEGG: slt:Slit_0010 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44
YP_003845834.1	KEGG: app:CAP2UW1_0048 hypothetical protein
YP_003845835.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: slt:Slit_0012 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein
YP_003845836.1	KEGG: slt:Slit_0013 two component transcriptional regulator, fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver
YP_003845837.1	TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: slt:Slit_0014 transketolase; SMART: Transketolase central region
YP_003845838.1	SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: slt:Slit_0015 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
YP_003845839.1	KEGG: slt:Slit_0016 phosphoglycerate kinase; PFAM: phosphoglycerate kinase
YP_003845840.1	TIGRFAM: pyruvate kinase; KEGG: slt:Slit_0017 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_003845841.1	TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: slt:Slit_0018 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II
YP_003845842.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nmu:Nmul_A0687 LysR family transcriptional regulator
YP_003845843.1	KEGG: slt:Slit_0022 ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like
YP_003845844.1	PFAM: ATPase associated with various cellular activities AAA_5; KEGG: slt:Slit_0023 CbbQ/NirQ/NorQ domain protein
YP_003845845.1	KEGG: slt:Slit_0024 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A
YP_003845846.1	PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: slt:Slit_0025 inositol phosphatase/fructose-16-bisphosphatase
YP_003845847.1	TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: slt:Slit_0026 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_003845848.1	TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: slt:Slit_0027 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase
YP_003845849.1	KEGG: slt:Slit_0028 carbonate dehydratase; PFAM: carbonic anhydrase
YP_003845850.1	KEGG: slt:Slit_0029 hypothetical protein
YP_003845851.1	TIGRFAM: orotate phosphoribosyltransferase; KEGG: slt:Slit_0030 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_003845852.1	TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: mei:Msip34_2527 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_003845853.1	KEGG: slt:Slit_2156 hypothetical protein
YP_003845854.1	PFAM: OmpA/MotB domain protein; KEGG: nmu:Nmul_A2188 OmpA/MotB
YP_003845855.1	KEGG: slt:Slit_1356 hypothetical protein
YP_003845856.1	KEGG: mmb:Mmol_0117 hypothetical protein
YP_003845857.1	KEGG: mpo:Mpop_2237 hypothetical protein
YP_003845858.1	KEGG: slt:Slit_2921 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_003845859.1	KEGG: slt:Slit_2922 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein
YP_003845860.1	KEGG: slt:Slit_2923 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp
YP_003845861.1	KEGG: slt:Slit_2924 hypothetical protein
YP_003845862.1	KEGG: slt:Slit_2925 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_003845863.1	TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: slt:Slit_2926 nitrogen metabolism transcriptional regulator, NtrC, fis family; SMART: response regulator receiver; AAA ATPase
YP_003845864.1	KEGG: psl:Psta_4123 hypothetical protein
YP_003845865.1	KEGG: dar:Daro_0284 hypothetical protein
YP_003845866.1	KEGG: slt:Slit_0052 UDP-N-acetylmuramate; TIGRFAM: UDP-N-acetylmuramate; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_003845867.1	PFAM: protein of unknown function DUF486; KEGG: slt:Slit_0053 protein of unknown function DUF486
YP_003845868.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_2184 putative glutamate synthase (NADPH) small subunit
YP_003845869.1	PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: rfr:Rfer_2185 thiamine pyrophosphate enzyme-like TPP-binding
YP_003845870.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain-containing protein; KEGG: lch:Lcho_2150 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
YP_003845871.1	TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; KEGG: app:CAP2UW1_2510 pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain
YP_003845872.1	KEGG: slt:Slit_0057 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type
YP_003845873.1	KEGG: slt:Slit_0058 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type
YP_003845874.1	TIGRFAM: methionine synthase; KEGG: slt:Slit_0060 methionine synthase; PFAM: homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; dihydropteroate synthase DHPS
YP_003845875.1	KEGG: pph:Ppha_0844 hypothetical protein
YP_003845876.1	TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: slt:Slit_0062 Mg chelatase, subunit ChlI; SMART: AAA ATPase
YP_003845877.1	PFAM: protein of unknown function DUF526; KEGG: cvi:CV_4001 hypothetical protein
YP_003845878.1	PFAM: Conserved hypothetical protein CHP02001; KEGG: slt:Slit_0064 hypothetical protein
YP_003845879.1	PFAM: nitrogen regulatory protein P-II; KEGG: slt:Slit_0065 nitrogen regulatory protein P-II
YP_003845880.1	KEGG: pol:Bpro_0184 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter
YP_003845881.1	KEGG: slt:Slit_0069 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003845882.1	KEGG: alv:Alvin_0883 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein
YP_003845883.1	KEGG: alv:Alvin_2395 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_003845884.1	KEGG: net:Neut_1169 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003845885.1	KEGG: mei:Msip34_0342 transglutaminase domain protein; PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein
YP_003845886.1	KEGG: hna:Hneap_1310 20S proteasome, A and B subunits
YP_003845887.1	PFAM: protein of unknown function DUF403; KEGG: hna:Hneap_1311 protein of unknown function DUF403
YP_003845888.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: app:CAP2UW1_0608 protein of unknown function DUF404
YP_003845889.1	KEGG: afr:AFE_2903 hypothetical protein
YP_003845890.1	KEGG: hna:Hneap_1308 hypothetical protein
YP_003845891.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: slt:Slit_2545 FAD-dependent pyridine nucleotide-disulfide oxidoreductase
YP_003845892.1	KEGG: slt:Slit_2159 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003845893.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; KEGG: tbd:Tbd_1953 diguanylate cyclase; SMART: GGDEF domain containing protein; CBS domain containing protein
YP_003845894.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: slt:Slit_2270 metal dependent phosphohydrolase
YP_003845895.1	KEGG: slo:Shew_2713 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein
YP_003845896.1	KEGG: rpt:Rpal_3839 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR
YP_003845897.1	KEGG: tbd:Tbd_0008 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_003845899.1	KEGG: gsu:GSU2942 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003845900.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: slt:Slit_0662 NADH:flavin oxidoreductase/NADH oxidase
YP_003845901.1	KEGG: slt:Slit_1191 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH
YP_003845902.1	KEGG: slt:Slit_1190 methylisocitrate lyase; TIGRFAM: methylisocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase
YP_003845903.1	TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: slt:Slit_1189 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase
YP_003845904.1	TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; KEGG: psa:PST_2036 aconitate hydratase; PFAM: aconitate hydratase domain-containing protein
YP_003845905.1	KEGG: pap:PSPA7_4725 hypothetical protein; TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453
YP_003845906.1	PFAM: AMP-dependent synthetase and ligase; KEGG: slt:Slit_1187 AMP-dependent synthetase and ligase
YP_003845907.1	TIGRFAM: malate/quinone oxidoreductase; KEGG: slt:Slit_0446 malate/quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase
YP_003845908.1	SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: slt:Slit_2272 2OG-Fe(II) oxygenase
YP_003845909.1	KEGG: har:HEAR2694 hypothetical protein
YP_003845910.1	PFAM: Serine/threonine-protein kinase-like domain; KEGG: slt:Slit_2416 cyclic nucleotide-binding protein
YP_003845911.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003845912.1	KEGG: tgr:Tgr7_1989 nitrate/sulfonate/bicarbonate ABC transporter
YP_003845913.1	KEGG: slt:Slit_0071 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein
YP_003845914.1	PFAM: glutaredoxin; KEGG: slt:Slit_1693 glutaredoxin
YP_003845915.1	TIGRFAM: glutamate racemase; KEGG: slt:Slit_0096 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_003845916.1	KEGG: slt:Slit_0097 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003845917.1	KEGG: OmpA/MotB domain protein; manually curated; PFAM: OmpA/MotB domain protein
YP_003845918.1	KEGG: slt:Slit_0100 glutamate/cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA
YP_003845919.1	PFAM: ApbE family lipoprotein; KEGG: slt:Slit_0101 ApbE family lipoprotein
YP_003845920.1	PFAM: PTS system fructose subfamily IIA component; KEGG: slt:Slit_0103 PTS system fructose subfamily IIA component
YP_003845921.1	KEGG: slt:Slit_0104 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr
YP_003845922.1	KEGG: slt:Slit_0105 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region
YP_003845923.1	KEGG: nmu:Nmul_A0727 putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein
YP_003845924.1	KEGG: nmu:Nmul_A0728 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_003845925.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-4 domain protein; MCP methyltransferase CheR-type; PAS fold domain protein; GGDEF domain containing protein; CheB methylesterase; KEGG: app:CAP2UW1_2118 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; MCP methyltransferase CheR-type
YP_003845926.1	KEGG: osa:4348862 hypothetical protein
YP_003845927.1	KEGG: ppw:PputW619_1796 GAF sensor signal transduction histidine kinase; PFAM: Phytochrome central region domain protein; GAF domain protein; SMART: GAF domain protein
YP_003845928.1	PFAM: Haem oxygenase-like; KEGG: msl:Msil_2021 heme oxygenase-like protein
YP_003845929.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-2 domain protein; PAS fold-4 domain protein; PAS fold domain protein; Phytochrome central region domain protein; GGDEF domain containing protein; GAF domain protein; KEGG: sfu:Sfum_2209 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein
YP_003845930.1	KEGG: mmb:Mmol_1892 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein
YP_003845931.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Metal-dependent hydrolase HDOD; KEGG: tmz:Tmz1t_3851 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver
YP_003845932.1	KEGG: slt:Slit_2296 HopJ type III effector protein; manually curated; PFAM: HopJ type III effector protein
YP_003845933.1	TIGRFAM: homoserine O-acetyltransferase; KEGG: slt:Slit_0036 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold
YP_003845934.1	KEGG: slt:Slit_0035 methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein
YP_003845935.1	KEGG: slt:Slit_0034 AmpG-related permease; TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1
YP_003845936.1	TIGRFAM: amino-acid N-acetyltransferase; KEGG: slt:Slit_2948 amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase
YP_003845937.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: slt:Slit_2947 4-oxalocrotonate tautomerase
YP_003845938.1	PFAM: protein of unknown function DUF558; KEGG: slt:Slit_2944 protein of unknown function DUF558
YP_003845939.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: slt:Slit_2943 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003845940.1	PFAM: inositol monophosphatase; KEGG: nmu:Nmul_A0377 inositol monophosphatase
YP_003845941.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: slt:Slit_2942 TrkA-N domain protein
YP_003845942.1	PFAM: cation transporter; KEGG: slt:Slit_2941 cation transporter
YP_003845943.1	KEGG: dar:Daro_3895 response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; Hpt domain protein
YP_003845944.1	PFAM: protein of unknown function DUF179; KEGG: slt:Slit_2935 protein of unknown function DUF179
YP_003845945.1	KEGG: slt:Slit_2933 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold
YP_003845946.1	KEGG: slt:Slit_2932 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain
YP_003845947.1	KEGG: slt:Slit_2931 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase
YP_003845948.1	KEGG: slt:Slit_2930 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F
YP_003845949.1	KEGG: slt:Slit_2928 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_003845950.1	KEGG: slt:Slit_0049 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding
YP_003845951.1	PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: slt:Slit_0048 peptidase M24
YP_003845952.1	PFAM: Nucleotidyl transferase; KEGG: slt:Slit_0047 nucleotidyl transferase
YP_003845953.1	PFAM: aminoglycoside phosphotransferase; KEGG: slt:Slit_0046 aminoglycoside phosphotransferase
YP_003845954.1	PFAM: Organic solvent tolerance protein; OstA family protein; KEGG: slt:Slit_0045 organic solvent tolerance protein
YP_003845955.1	PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: slt:Slit_0044 SurA domain protein
YP_003845956.1	TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: cvi:CV_4231 pyridoxal phosphate biosynthesis protein; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_003845957.1	TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: slt:Slit_0042 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like
YP_003845958.1	KEGG: slt:Slit_0889 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003845959.1	TIGRFAM: lactoylglutathione lyase; KEGG: net:Neut_1541 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_003845960.1	KEGG: slt:Slit_0041 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_003845961.1	KEGG: slt:Slit_0040 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_003845962.1	KEGG: slt:Slit_0039 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III
YP_003845963.1	KEGG: slt:Slit_0038 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related
YP_003845964.1	KEGG: slt:Slit_0037 porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase
YP_003845965.1	KEGG: slt:Slit_0106 hypothetical protein
YP_003845966.1	KEGG: slt:Slit_0107 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_003845967.1	KEGG: slt:Slit_0108 type IV pilus assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: cell division protein FtsA
YP_003845968.1	PFAM: Fimbrial assembly family protein; KEGG: slt:Slit_0109 fimbrial assembly family protein
YP_003845969.1	KEGG: slt:Slit_0110 pilus assembly protein PilO
YP_003845970.1	PFAM: Pilus assembly protein PilP; KEGG: slt:Slit_0111 pilus assembly protein PilP
YP_003845971.1	KEGG: slt:Slit_0112 type IV pilus secretin PilQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Localisation of periplasmic protein complexes; Secretin/TonB short domain
YP_003845972.1	KEGG: slt:Slit_0113 3-dehydroquinate synthase; PFAM: shikimate kinase
YP_003845973.1	TIGRFAM: 3-dehydroquinate synthase; KEGG: slt:Slit_0113 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase
YP_003845974.1	TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: slt:Slit_0114 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region
YP_003845975.1	KEGG: dar:Daro_3036 putative Tfp pilus assembly protein tip-associated adhesin PilY1
YP_003845976.1	KEGG: dar:Daro_3037 hypothetical protein
YP_003845977.1	KEGG: hypothetical protein
YP_003845978.1	KEGG: mmb:Mmol_2272 hypothetical protein
YP_003845979.1	KEGG: dar:Daro_3040 general secretion pathway protein H
YP_003845980.1	KEGG: tmz:Tmz1t_2663 type IV pilus biogenesis protein PilE
YP_003845981.1	KEGG: lch:Lcho_2910 TonB family protein
YP_003845982.1	KEGG: sha:SH0326 hypothetical protein
YP_003845983.1	KEGG: slt:Slit_0115 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein
YP_003845984.1	KEGG: mei:Msip34_2804 glutamate synthase, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003845985.1	TIGRFAM: uroporphyrinogen decarboxylase; KEGG: slt:Slit_0117 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D)
YP_003845986.1	TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: slt:Slit_0118 primosomal protein N'; SMART: DEAD-like helicase ; helicase domain protein
YP_003845987.1	KEGG: mca:MCA1787 hypothetical protein
YP_003845988.1	PFAM: FAD linked oxidase domain protein; KEGG: slt:Slit_0120 FAD linked oxidase domain protein
YP_003845989.1	TIGRFAM: arginyl-tRNA synthetase; KEGG: slt:Slit_0126 arginyl-tRNA synthetase
YP_003845990.1	PFAM: Sporulation domain-containing protein; KEGG: slt:Slit_0127 sporulation domain protein
YP_003845991.1	PFAM: DSBA oxidoreductase; KEGG: slt:Slit_0128 DsbA oxidoreductase
YP_003845992.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: slt:Slit_0129 short-chain dehydrogenase/reductase SDR
YP_003845993.1	PFAM: Protein of unknown function DUF2782; KEGG: slt:Slit_2835 hypothetical protein
YP_003845994.1	TIGRFAM: homoserine kinase; KEGG: slt:Slit_2836 homoserine kinase; PFAM: aminoglycoside phosphotransferase
YP_003845995.1	KEGG: nmu:Nmul_A0564 transmembrane protein
YP_003845996.1	KEGG: slt:Slit_2838 hypothetical protein
YP_003845997.1	PFAM: MEKHLA domain protein; KEGG: slt:Slit_2843 MEKHLA domain protein
YP_003845998.1	PFAM: UvrD/REP helicase; KEGG: slt:Slit_2844 UvrD/REP helicase
YP_003845999.1	PFAM: PP-loop domain protein; KEGG: slt:Slit_0169 PP-loop domain protein
YP_003846000.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: slt:Slit_0168 short-chain dehydrogenase/reductase SDR
YP_003846001.1	PFAM: protein of unknown function DUF185; KEGG: slt:Slit_0167 protein of unknown function DUF185
YP_003846002.1	SMART: Calcium-binding EF-hand-containing protein; KEGG: rso:RSc3104 putative calcium binding signal peptide protein
YP_003846003.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: slt:Slit_0165 polynucleotide adenylyltransferase/metal dependent phosphohydrolase
YP_003846004.1	PFAM: Lytic transglycosylase catalytic; KEGG: slt:Slit_0164 lytic transglycosylase catalytic
YP_003846005.1	PFAM: exonuclease RdgC; KEGG: putative exonuclease RdgC
YP_003846006.1	PFAM: Conserved hypothetical protein CHP00730; KEGG: slt:Slit_2834 hypothetical protein
YP_003846007.1	TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: slt:Slit_2833 DNA polymerase I; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2
YP_003846008.1	PFAM: glycosyl transferase family 9; KEGG: slt:Slit_0315 glycosyl transferase family 9
YP_003846009.1	PFAM: GtrA family protein; KEGG: slt:Slit_0316 GtrA family protein
YP_003846010.1	PFAM: glycosyl transferase family 39; KEGG: slt:Slit_0317 glycosyl transferase family 39
YP_003846011.1	KEGG: slt:Slit_0318 BNR/Asp-box repeat protein
YP_003846012.1	KEGG: slt:Slit_0319 hypothetical protein
YP_003846013.1	TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: slt:Slit_0346 dihydroneopterin aldolase; SMART: dihydroneopterin aldolase
YP_003846014.1	PFAM: protein of unknown function DUF205; KEGG: slt:Slit_0347 protein of unknown function DUF205
YP_003846015.1	TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: nmu:Nmul_A2061 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease
YP_003846016.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mms:mma_3530 hypothetical protein; SMART: GGDEF domain containing protein
YP_003846017.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: slt:Slit_2669 UBA/ThiF-type NAD/FAD binding protein
YP_003846018.1	KEGG: slt:Slit_2623 hypothetical protein
YP_003846019.1	TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: slt:Slit_2622 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein
YP_003846020.1	PFAM: Peptidase M23; KEGG: slt:Slit_2621 peptidase M23
YP_003846021.1	TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: slt:Slit_2620 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: metalloenzyme domain protein; BPG-independent PGAM domain protein
YP_003846022.1	KEGG: slt:Slit_2619 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_003846023.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: slt:Slit_1147 sulfide-quinone reductase, putative
YP_003846024.1	KEGG: slt:Slit_1146 hypothetical protein
YP_003846025.1	KEGG: slt:Slit_2618 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003846026.1	PFAM: acriflavin resistance protein; KEGG: slt:Slit_2617 acriflavin resistance protein
YP_003846027.1	PFAM: Protein of unknown function DUF2892; KEGG: slt:Slit_2616 hypothetical protein
YP_003846028.1	PFAM: O-antigen polymerase; KEGG: slt:Slit_2615 O-antigen polymerase
YP_003846029.1	KEGG: slt:Slit_2614 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_003846030.1	KEGG: slt:Slit_2613 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin
YP_003846031.1	KEGG: slt:Slit_2612 protein-export protein SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB
YP_003846032.1	PFAM: protein of unknown function DUF1058; KEGG: slt:Slit_2611 protein of unknown function DUF1058
YP_003846033.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: slt:Slit_2610 glycerol-3-phosphate dehydrogenase (NAD(P)(+))
YP_003846034.1	KEGG: slt:Slit_2609 tRNA/rRNA methyltransferase (SpoU); TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU)
YP_003846035.1	KEGG: slt:Slit_2608 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase
YP_003846036.1	PFAM: Type II secretion system F domain; KEGG: slt:Slit_2607 type II secretion system F domain protein
YP_003846037.1	KEGG: sds:SDEG_0928 two component system histidine kinase
YP_003846038.1	KEGG: mmb:Mmol_1195 general secretion pathway protein H
YP_003846039.1	KEGG: tbd:Tbd_0755 general secretion pathway protein H
YP_003846040.1	KEGG: slt:Slit_2602 hypothetical protein
YP_003846041.1	KEGG: slt:Slit_2601 hypothetical protein
YP_003846042.1	KEGG: slt:Slit_2600 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshP; putative signal peptide
YP_003846043.1	KEGG: hypothetical protein
YP_003846044.1	KEGG: slt:Slit_2597 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshI
YP_003846045.1	PFAM: Fimbrial assembly family protein; KEGG: slt:Slit_2596 putative mannose-sensitive agglutinin (MSHA)
YP_003846046.1	KEGG: slt:Slit_2595 putative mannose-sensitive agglutinin (MSHA)
YP_003846047.1	KEGG: slt:Slit_2594 hypothetical protein
YP_003846048.1	PFAM: type II and III secretion system protein; Secretin domain protein; Secretin/TonB short domain; KEGG: slt:Slit_2593 type II and III secretion system protein
YP_003846049.1	KEGG: slt:Slit_2592 general secretion pathway protein, ATPase
YP_003846050.1	KEGG: slt:Slit_2591 TPR repeat-containing protein
YP_003846051.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: slt:Slit_2270 metal dependent phosphohydrolase
YP_003846052.1	KEGG: slt:Slit_2590 phosphoribosyltransferase; manually curated; PFAM: phosphoribosyltransferase
YP_003846053.1	SMART: biotin and thiamin synthesis associated; Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: slt:Slit_2589 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein
YP_003846054.1	TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: slt:Slit_2588 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II
YP_003846055.1	TIGRFAM: bioH protein; KEGG: slt:Slit_2587 BioH protein; PFAM: alpha/beta hydrolase fold
YP_003846056.1	KEGG: slt:Slit_2586 biotin biosynthesis protein BioC; TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11
YP_003846057.1	TIGRFAM: dethiobiotin synthase; KEGG: slt:Slit_2585 dethiobiotin synthase
YP_003846058.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: slt:Slit_2584 hypothetical protein
YP_003846059.1	PFAM: electron transport protein SCO1/SenC; KEGG: slt:Slit_2583 electron transport protein SCO1/SenC
YP_003846060.1	KEGG: slt:Slit_2581 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver
YP_003846061.1	KEGG: slt:Slit_2580 cell division FtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: DNA translocase ftsK gamma; AAA ATPase
YP_003846062.1	KEGG: slt:Slit_2579 outer membrane lipoprotein carrier protein LolA; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA
YP_003846063.1	PFAM: KilA, N-terminal/APSES-type HTH, DNA-binding; KEGG: plu:plu1205 hypothetical protein
YP_003846064.1	KEGG: slt:Slit_2578 AAA ATPase central domain protein; PFAM: MgsA AAA+ ATPase-like; AAA ATPase central domain protein; SMART: AAA ATPase
YP_003846065.1	PFAM: Methyltransferase type 11; KEGG: min:Minf_1771 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
YP_003846066.1	KEGG: slt:Slit_2576 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like
YP_003846067.1	KEGG: slt:Slit_2569 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3
YP_003846069.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; KEGG: slt:Slit_0411 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I
YP_003846070.1	KEGG: slt:Slit_0412 cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO
YP_003846071.1	KEGG: slt:Slit_0413 hypothetical protein
YP_003846072.1	PFAM: cytochrome c class I; KEGG: slt:Slit_0414 cytochrome c oxidase, cbb3-type, subunit III
YP_003846074.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: slt:Slit_0416 cytochrome c oxidase accessory protein CcoG
YP_003846075.1	PFAM: FixH family protein; KEGG: slt:Slit_0417 FixH family protein
YP_003846076.1	KEGG: slt:Slit_0418 copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; Putative metal-binding domain of cation transport ATPase
YP_003846077.1	KEGG: slt:Slit_0419 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type
YP_003846078.1	KEGG: slt:Slit_0420 hypothetical protein
YP_003846079.1	KEGG: slt:Slit_0421 hypothetical protein
YP_003846080.1	KEGG: slt:Slit_0422 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp
YP_003846081.1	TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: slt:Slit_0423 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_003846082.1	SMART: HhH-GPD family protein; manually curated; TIGRFAM: A/G-specific adenine glycosylase; KEGG: slt:Slit_0427 A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop
YP_003846083.1	KEGG: slt:Slit_0442 sodium/hydrogen exchanger; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein
YP_003846084.1	SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: slt:Slit_0441 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein
YP_003846085.1	KEGG: slt:Slit_0440 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA
YP_003846086.1	PFAM: protein of unknown function DUF1239; KEGG: slt:Slit_0439 protein of unknown function DUF1239
YP_003846087.1	KEGG: slt:Slit_0438 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein
YP_003846088.1	KEGG: slt:Slit_0437 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003846089.1	KEGG: slt:Slit_0436 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor; sigma-54 factor core-binding region
YP_003846090.1	KEGG: slt:Slit_0435 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA
YP_003846091.1	KEGG: slt:Slit_0434 putative PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
YP_003846092.1	PFAM: HPr serine kinase domain-containing protein; KEGG: slt:Slit_0433 HPr kinase
YP_003846093.1	KEGG: slt:Slit_0432 hypothetical protein
YP_003846094.1	PFAM: protein of unknown function DUF1312; KEGG: slt:Slit_0431 protein of unknown function DUF1312
YP_003846095.1	PFAM: Heptaprenyl diphosphate synthase component I; KEGG: slt:Slit_0430 heptaprenyl diphosphate synthase component I
YP_003846096.1	KEGG: slt:Slit_0429 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein
YP_003846097.1	KEGG: slt:Slit_2704 thiamine monophosphate synthase; TIGRFAM: mutator MutT protein; PFAM: thiamine monophosphate synthase; NUDIX hydrolase
YP_003846098.1	KEGG: slt:Slit_2703 protein of unknown function DUF329; manually curated; PFAM: protein of unknown function DUF329
YP_003846099.1	PFAM: protein of unknown function DUF1342; KEGG: slt:Slit_2702 protein of unknown function DUF1342
YP_003846100.1	TIGRFAM: dephospho-CoA kinase; KEGG: slt:Slit_2701 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_003846101.1	KEGG: slt:Slit_2700 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV
YP_003846102.1	PFAM: Type II secretion system F domain; KEGG: slt:Slit_2699 type II secretion system F domain protein
YP_003846103.1	KEGG: slt:Slit_2698 protein of unknown function DUF21; manually curated; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region
YP_003846104.1	KEGG: slt:Slit_2697 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase
YP_003846105.1	TIGRFAM: dihydroxy-acid dehydratase; KEGG: slt:Slit_2696 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_003846106.1	PFAM: Aldose 1-epimerase; KEGG: tbd:Tbd_2730 dihydroxyacid dehydratase
YP_003846107.1	KEGG: dgr:Dgri_GH22395 GH22395 gene product from transcript GH22395-RA
YP_003846108.1	PFAM: cytochrome c class I; KEGG: slt:Slit_2693 cytochrome c class I
YP_003846109.1	PFAM: cytochrome c class I; KEGG: slt:Slit_2693 cytochrome c class I
YP_003846110.1	PFAM: Extracellular ligand-binding receptor; KEGG: slt:Slit_2692 extracellular ligand-binding receptor
YP_003846111.1	PFAM: inner-membrane translocator; KEGG: slt:Slit_2691 inner-membrane translocator
YP_003846112.1	PFAM: inner-membrane translocator; KEGG: slt:Slit_2690 inner-membrane translocator
YP_003846113.1	KEGG: slt:Slit_2689 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003846114.1	manually curated; PFAM: ABC transporter related; KEGG: slt:Slit_2687 ABC transporter related protein; SMART: AAA ATPase
YP_003846115.1	TIGRFAM: RelA/SpoT family protein; KEGG: slt:Slit_0275 RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain-containing protein
YP_003846116.1	PFAM: protein of unknown function DUF81; KEGG: slt:Slit_2685 protein of unknown function DUF81
YP_003846117.1	PFAM: protein of unknown function DUF55; KEGG: slt:Slit_2684 protein of unknown function DUF55
YP_003846118.1	PFAM: protein of unknown function DUF445; KEGG: vap:Vapar_0330 protein of unknown function DUF445
YP_003846119.1	PFAM: protein of unknown function DUF710; KEGG: slt:Slit_2683 protein of unknown function DUF710
YP_003846120.1	manually curated; KEGG: slt:Slit_2682 hypothetical protein
YP_003846121.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: slt:Slit_2681 TonB-dependent receptor plug
YP_003846122.1	KEGG: slt:Slit_2680 hypothetical protein
YP_003846123.1	TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: mmb:Mmol_0278 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_003846124.1	TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: slt:Slit_2679 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; SMART: AAA ATPase
YP_003846125.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: mfa:Mfla_1689 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003846126.1	KEGG: slt:Slit_0144 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_003846127.1	KEGG: hor:Hore_02400 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SirA-like domain-containing protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein
YP_003846128.1	KEGG: slt:Slit_1843 hypothetical protein
YP_003846129.1	KEGG: nha:Nham_1934 hypothetical protein
YP_003846130.1	PFAM: cytochrome c class II; KEGG: tbd:Tbd_1357 hypothetical protein
YP_003846131.1	PFAM: regulatory protein TetR; KEGG: slt:Slit_1136 transcriptional regulator, TetR family
YP_003846132.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003846133.1	KEGG: slt:Slit_2728 MraZ protein; TIGRFAM: MraZ protein; PFAM: MraZ domain
YP_003846134.1	KEGG: slt:Slit_2727 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase
YP_003846135.1	KEGG: slt:Slit_2726 cell division protein FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL
YP_003846136.1	KEGG: slt:Slit_2725 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_003846137.1	KEGG: slt:Slit_2724 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_003846138.1	KEGG: slt:Slit_2723 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D -alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_003846139.1	KEGG: nmu:Nmul_A2497 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region
YP_003846140.1	KEGG: slt:Slit_2721 UDP-N-acetylmuramoylalanine/D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein
YP_003846141.1	KEGG: slt:Slit_2720 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein
YP_003846143.1	KEGG: slt:Slit_2719 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28
YP_003846144.1	KEGG: slt:Slit_2718 UDP-N-acetylmuramate/alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_003846145.1	TIGRFAM: D-alanine/D-alanine ligase; UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: mfa:Mfla_2266 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein
YP_003846146.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: slt:Slit_2715 cell division protein FtsQ
YP_003846147.1	TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: slt:Slit_2714 cell division protein FtsA; SMART: cell division protein FtsA
YP_003846148.1	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; KEGG: slt:Slit_2713 cell division protein FtsZ; SMART: Tubulin/FtsZ, 2-layer sandwich domain
YP_003846149.1	KEGG: slt:Slit_2712 UDP-3-0-acyl N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase
YP_003846150.1	KEGG: slt:Slit_2711 hypothetical protein
YP_003846151.1	KEGG: slt:Slit_2710 protein of unknown function DUF721; manually curated; PFAM: protein of unknown function DUF721
YP_003846152.1	PFAM: Peptidase M23; KEGG: slt:Slit_2709 peptidase M23
YP_003846153.1	KEGG: slt:Slit_2708 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SEC-C motif domain protein; SecA preprotein cross-linking region
YP_003846154.1	KEGG: slt:Slit_2707 putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_003846155.1	TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: slt:Slit_2706 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ
YP_003846156.1	KEGG: slt:Slit_2705 protein of unknown function DUF815; PFAM: protein of unknown function DUF815; SMART: AAA ATPase
YP_003846157.1	TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; KEGG: app:CAP2UW1_1241 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein
YP_003846158.1	PFAM: OsmC family protein; KEGG: slt:Slit_2473 OsmC family protein
YP_003846159.1	PFAM: protein of unknown function DUF218; KEGG: slt:Slit_2472 protein of unknown function DUF218
YP_003846160.1	KEGG: slt:Slit_2457 ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13
YP_003846161.1	PFAM: ribosomal protein S9; KEGG: slt:Slit_2456 ribosomal protein S9
YP_003846162.1	SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: slt:Slit_2455 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_003846163.1	KEGG: slt:Slit_2454 hypothetical protein
YP_003846164.1	PFAM: protein of unknown function DUF583; KEGG: slt:Slit_2453 protein of unknown function DUF583
YP_003846165.1	KEGG: slt:Slit_2452 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein
YP_003846166.1	PFAM: SlyX family protein; KEGG: slt:Slit_2430 SlyX family protein
YP_003846167.1	PFAM: protein of unknown function UPF0075; KEGG: slt:Slit_2451 protein of unknown function UPF0075
YP_003846168.1	PFAM: Peptidase M23; KEGG: slt:Slit_2450 peptidase M23
YP_003846169.1	KEGG: slt:Slit_2449 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein
YP_003846170.1	KEGG: slt:Slit_2447 ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21
YP_003846171.1	KEGG: slt:Slit_2446 hypothetical protein
YP_003846172.1	TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; DNA primase, DnaB-helicase binding domain; DNA primase DnaG DnaB-binding; TOPRIM domain-containing protein; KEGG: slt:Slit_2445 DNA primase; SMART: Toprim sub domain-containing protein
YP_003846173.1	KEGG: slt:Slit_2444 RNA polymerase, sigma 70 subunit, RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2
YP_003846174.1	PFAM: major facilitator superfamily MFS_1; KEGG: slt:Slit_0320 major facilitator superfamily MFS_1
YP_003846175.1	KEGG: slt:Slit_0321 trans-hexaprenyltranstransferase; manually curated; PFAM: Polyprenyl synthetase
YP_003846176.1	KEGG: slt:Slit_2635 hypothetical protein
YP_003846177.1	KEGG: slt:Slit_2634 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_003846178.1	KEGG: slt:Slit_2633 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_003846179.1	KEGG: nmu:Nmul_A1812 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2
YP_003846180.1	KEGG: slt:Slit_2631 ribonucleoside-diphosphate reductase, alpha subunit; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein
YP_003846181.1	KEGG: slt:Slit_2630 ribonucleoside-diphosphate reductase; PFAM: ribonucleotide reductase
YP_003846182.1	PFAM: SEFIR domain protein; KEGG: shm:Shewmr7_1857 SEFIR domain-containing protein
YP_003846183.1	KEGG: mmw:Mmwyl1_2681 hypothetical protein
YP_003846184.1	KEGG: vap:Vapar_2240 hypothetical protein
YP_003846185.1	PFAM: Domain of unknown function DUF1814; KEGG: dol:Dole_0233 hypothetical protein
YP_003846186.1	PFAM: restriction modification system DNA specificity domain; KEGG: swd:Swoo_0501 restriction modification system DNA specificity subunit
YP_003846187.1	KEGG: pnu:Pnuc_1133 N-6 DNA methylase; PFAM: N-6 DNA methylase
YP_003846188.1	KEGG: mem:Memar_0599 hypothetical protein
YP_003846189.1	PFAM: EcoEI R domain protein; type III restriction protein res subunit; protein of unknown function DUF450; KEGG: pnu:Pnuc_1134 EcoEI R domain-containing protein; SMART: DEAD-like helicase
YP_003846190.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; GAF domain protein; KEGG: phe:Phep_3858 PAS sensor protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein
YP_003846191.1	PFAM: Patatin; KEGG: lhk:LHK_03113 probable transmembrane protein
YP_003846192.1	KEGG: slt:Slit_0388 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein
YP_003846193.1	KEGG: tmz:Tmz1t_0174 hypothetical protein
YP_003846194.1	KEGG: ehi:EHI_167940 hypothetical protein
YP_003846195.1	SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: slt:Slit_0398 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; metal-dependent phosphohydrolase HD sub domain
YP_003846196.1	KEGG: slt:Slit_0399 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6
YP_003846197.1	SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: slt:Slit_0400 guanylate kinase; PFAM: guanylate kinase
YP_003846198.1	KEGG: rcu:RCOM_1981590 hypothetical protein
YP_003846199.1	PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: slt:Slit_0401 YicC domain protein
YP_003846200.1	KEGG: slt:Slit_0402 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein
YP_003846201.1	TIGRFAM: ribonuclease PH; KEGG: slt:Slit_0403 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
YP_003846202.1	KEGG: slt:Slit_0404 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein
YP_003846203.1	TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: slt:Slit_0405 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_003846204.1	KEGG: slt:Slit_0408 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase
YP_003846205.1	PFAM: thiazole biosynthesis family protein; KEGG: slt:Slit_0409 thiazole biosynthesis family protein
YP_003846206.1	KEGG: slt:Slit_0410 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein
YP_003846207.1	PFAM: major facilitator superfamily MFS_1; KEGG: slt:Slit_1252 major facilitator superfamily MFS_1
YP_003846208.1	SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: slt:Slit_2567 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; nucleic acid binding OB-fold tRNA/helicase-type; PHP domain protein
YP_003846209.1	KEGG: hau:Haur_2605 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003846210.1	PFAM: protein of unknown function DUF214; KEGG: mth:MTH695 hypothetical protein
YP_003846211.1	KEGG: hoh:Hoch_6085 serine/threonine protein kinase
YP_003846212.1	PFAM: uncharacterized conserved protein UCP07580; KEGG: abo:ABO_0181 hypothetical protein
YP_003846213.1	PFAM: Cytochrome b/b6 domain; KEGG: slt:Slit_1321 cytochrome b561
YP_003846214.1	KEGG: slt:Slit_1322 hypothetical protein
YP_003846215.1	PFAM: Domain of unknown function DUF1924; KEGG: slt:Slit_1323 domain of unknown function DUF1924
YP_003846216.1	PFAM: Dihaem cytochrome c; KEGG: slt:Slit_1324 diheme cytochrome c
YP_003846217.1	PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; KEGG: slt:Slit_2672 ATPase-like, ParA/MinD
YP_003846218.1	manually curated; TIGRFAM: deoxycytidine triphosphate deaminase; KEGG: slt:Slit_2543 deoxycytidine triphosphate deaminase
YP_003846219.1	KEGG: slt:Slit_2542 hypothetical protein
YP_003846221.1	KEGG: slt:Slit_2541 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein
YP_003846222.1	KEGG: azo:azo1134 cold-shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_003846223.1	PFAM: protein of unknown function UPF0153; KEGG: dar:Daro_1132 hypothetical protein
YP_003846224.1	KEGG: slt:Slit_0072 hypothetical protein
YP_003846225.1	PFAM: peptidase U32; Peptidase U32, collagenase; KEGG: slt:Slit_2532 peptidase U32
YP_003846226.1	KEGG: slt:Slit_2522 dihydrofolate reductase; PFAM: dihydrofolate reductase region
YP_003846227.1	TIGRFAM: thymidylate synthase; KEGG: slt:Slit_2520 thymidylate synthase; PFAM: thymidylate synthase
YP_003846228.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: slt:Slit_2519 leucyl aminopeptidase
YP_003846229.1	KEGG: slt:Slit_2516 putative inner membrane protein
YP_003846230.1	KEGG: pnu:Pnuc_1096 sulfotransferase; manually curated; PFAM: SEC-C motif domain protein; Tetratricopeptide TPR_1 repeat-containing protein; sulfotransferase
YP_003846231.1	KEGG: slt:Slit_2508 hypothetical protein
YP_003846232.1	KEGG: slt:Slit_2507 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; biotin/lipoyl attachment domain-containing protein
YP_003846233.1	TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: slt:Slit_2506 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase
YP_003846234.1	KEGG: slt:Slit_2505 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_003846236.1	PFAM: porin Gram-negative type; KEGG: slt:Slit_2478 porin gram-negative type
YP_003846237.1	PFAM: Ubiquinone biosynthesis family protein; KEGG: slt:Slit_2474 hypothetical protein
YP_003846238.1	KEGG: slt:Slit_2521 S23 ribosomal protein
YP_003846239.1	KEGG: slt:Slit_0264 hypothetical protein
YP_003846241.1	KEGG: slt:Slit_0624 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II
YP_003846242.1	KEGG: slt:Slit_0625 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase
YP_003846243.1	KEGG: slt:Slit_0626 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I
YP_003846244.1	TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: slt:Slit_0627 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein
YP_003846245.1	KEGG: slt:Slit_0628 imidazoleglycerol phosphate synthase, cyclase subunit; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein
YP_003846246.1	KEGG: slt:Slit_0629 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase
YP_003846247.1	KEGG: slt:Slit_0630 phosphoribosyl-ATP diphosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like
YP_003846248.1	PFAM: histidine triad (HIT) protein; KEGG: slt:Slit_0631 histidine triad (HIT) protein
YP_003846249.1	KEGG: slt:Slit_0632 twin-arginine translocation protein, TatA/E family subunit; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106
YP_003846250.1	KEGG: slt:Slit_0633 twin-arginine translocation protein, TatB subunit; TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106
YP_003846251.1	KEGG: slt:Slit_0634 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase
YP_003846252.1	PFAM: MscS Mechanosensitive ion channel; KEGG: mei:Msip34_0332 MscS mechanosensitive ion channel
YP_003846253.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: slt:Slit_0635 HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein
YP_003846254.1	PFAM: protein of unknown function DUF34; KEGG: slt:Slit_0636 protein of unknown function DUF34
YP_003846255.1	KEGG: slt:Slit_0638 hypothetical protein
YP_003846256.1	KEGG: slt:Slit_0640 hypothetical protein
YP_003846257.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: slt:Slit_0641 molybdopterin dinucleotide-binding region
YP_003846258.1	KEGG: slt:Slit_0642 4Fe-4S ferredoxin, iron-sulfur binding protein
YP_003846259.1	PFAM: Polysulphide reductase NrfD; KEGG: slt:Slit_0643 polysulphide reductase NrfD
YP_003846260.1	PFAM: Protein of unknown function DUF3341; KEGG: slt:Slit_0644 hypothetical protein
YP_003846261.1	PFAM: cytochrome c class I; KEGG: slt:Slit_0645 hypothetical protein
YP_003846262.1	KEGG: slt:Slit_0646 hypothetical protein
YP_003846263.1	PFAM: Glutathione S-transferase domain; KEGG: dar:Daro_0812 glutathione S-transferase
YP_003846264.1	PFAM: Stringent starvation protein B; KEGG: slt:Slit_0648 stringent starvation protein B
YP_003846265.1	KEGG: slt:Slit_0649 RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein
YP_003846266.1	KEGG: slt:Slit_2376 hypothetical protein
YP_003846267.1	PFAM: protein of unknown function DUF214; KEGG: slt:Slit_2371 protein of unknown function DUF214
YP_003846268.1	TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: slt:Slit_2370 cell division ATP-binding protein FtsE; SMART: AAA ATPase
YP_003846269.1	TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: slt:Slit_2369 signal recognition particle-docking protein FtsY; SMART: AAA ATPase
YP_003846270.1	PFAM: peptidase M16 domain protein; KEGG: slt:Slit_2368 peptidase M16 domain protein
YP_003846271.1	KEGG: slt:Slit_2367 peptidase M16 domain protein; PFAM: peptidase M16 domain protein
YP_003846272.1	TIGRFAM: methyltransferase; KEGG: slt:Slit_2366 methyltransferase; PFAM: Conserved hypothetical protein CHP00095
YP_003846273.1	TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: slt:Slit_2365 pantetheine-phosphate adenylyltransferase; PFAM: cytidylyltransferase
YP_003846274.1	KEGG: slt:Slit_2364 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_003846275.1	PFAM: protein of unknown function DUF167; KEGG: gem:GM21_2508 protein of unknown function DUF167
YP_003846276.1	PFAM: phosphoesterase; KEGG: slt:Slit_2927 phosphoesterase
YP_003846277.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: metal-dependent phosphohydrolase HD sub domain; Hemerythrin HHE cation binding domain protein; KEGG: pat:Patl_2248 response regulator receiver modulated metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein
YP_003846278.1	TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: slt:Slit_2362 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding
YP_003846279.1	PFAM: ABC-type uncharacterized transport system; KEGG: slt:Slit_2361 ABC-type uncharacterized transport system
YP_003846280.1	KEGG: slt:Slit_2360 putative ABC-2 type transport system permease protein
YP_003846281.1	KEGG: mfa:Mfla_0682 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003846282.1	KEGG: slt:Slit_2357 TPR repeat-containing protein
YP_003846283.1	KEGG: slt:Slit_2356 outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB
YP_003846284.1	TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: slt:Slit_2355 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein
YP_003846285.1	TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: slt:Slit_2354 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_003846286.1	KEGG: slt:Slit_2353 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like
YP_003846287.1	TIGRFAM: peptidyl-tRNA hydrolase; KEGG: slt:Slit_2352 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase
YP_003846288.1	KEGG: bav:BAV2626 cellulose biosynthesis protein
YP_003846289.1	manually curated; KEGG: bav:BAV2626 cellulose biosynthesis protein
YP_003846290.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: pin:Ping_2944 membrane bound O-acyl transferase, MBOAT family protein
YP_003846291.1	PFAM: cellulose synthase operon C domain protein; KEGG: reu:Reut_B3525 TPR repeat-containing cellulose synthase operon C
YP_003846292.1	KEGG: yen:YE4072A endo-1,4-D-glucanase; PFAM: glycoside hydrolase family 8
YP_003846293.1	KEGG: pst:PSPTO_1031 cell morphology protein
YP_003846294.1	KEGG: pmy:Pmen_1671 hypothetical protein
YP_003846295.1	KEGG: hypothetical protein
YP_003846296.1	PFAM: major facilitator superfamily MFS_1; KEGG: slt:Slit_2128 major facilitator superfamily MFS_1
YP_003846297.1	TIGRFAM: cellulose synthase operon protein YhjU; KEGG: vfm:VFMJ11_A1007 cellulose synthase operon protein YhjU
YP_003846298.1	KEGG: slt:Slit_2125 3-isopropylmalate dehydratase, large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein
YP_003846299.1	PFAM: Entericidin EcnAB; KEGG: tau:Tola_3008 entericidin EcnAB
YP_003846300.1	KEGG: slt:Slit_2123 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein
YP_003846301.1	TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: slt:Slit_2122 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_003846302.1	SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: tgr:Tgr7_1248 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding
YP_003846303.1	KEGG: slt:Slit_2120 FimV N-terminal domain protein; TIGRFAM: FimV N-terminal domain; FimV C-terminal domain; PFAM: Peptidoglycan-binding lysin domain
YP_003846304.1	KEGG: slt:Slit_2119 hypothetical protein
YP_003846305.1	KEGG: slt:Slit_2118 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain
YP_003846306.1	KEGG: slt:Slit_2116 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
YP_003846307.1	KEGG: slt:Slit_2115 tryptophan synthase, beta subunit; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_003846308.1	KEGG: slt:Slit_2114 tryptophan synthase, alpha subunit; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain
YP_003846309.1	KEGG: slt:Slit_2113 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase
YP_003846310.1	KEGG: slt:Slit_2111 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein
YP_003846311.1	PFAM: Sporulation domain-containing protein; KEGG: slt:Slit_2110 sporulation domain protein
YP_003846312.1	PFAM: Colicin V production protein; KEGG: slt:Slit_2109 colicin V production protein
YP_003846313.1	KEGG: slt:Slit_2108 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase
YP_003846314.1	KEGG: slt:Slit_2107 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_003846315.1	PFAM: CinA domain protein; KEGG: slt:Slit_2106 CinA domain protein
YP_003846316.1	TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: slt:Slit_2105 RecA protein; SMART: AAA ATPase
YP_003846317.1	PFAM: regulatory protein RecX; KEGG: slt:Slit_2104 regulatory protein RecX
YP_003846318.1	TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD; KEGG: slt:Slit_2103 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase SAD
YP_003846319.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: slt:Slit_2101 phosphomannomutase
YP_003846320.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold-3 domain protein; KEGG: diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver
YP_003846321.1	KEGG: slt:Slit_2100 lipopolysaccharide heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9
YP_003846322.1	PFAM: Zinc finger, CHCC-type; KEGG: slt:Slit_2099 zinc finger, CHCC-type
YP_003846323.1	KEGG: slt:Slit_2098 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV
YP_003846324.1	KEGG: slt:Slit_2245 cytochrome b561
YP_003846325.1	KEGG: mfa:Mfla_2394 two component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_003846326.1	KEGG: dar:Daro_3172 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003846327.1	KEGG: alv:Alvin_0396 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003846328.1	KEGG: pin:Ping_0484 multi-sensor histidine kinase; PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver; Hpt domain protein
YP_003846329.1	PFAM: Spermine synthase; KEGG: slt:Slit_2028 spermine synthase
YP_003846330.1	KEGG: slt:Slit_2026 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031
YP_003846331.1	TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: slt:Slit_2025 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein
YP_003846332.1	PFAM: TatD-related deoxyribonuclease; KEGG: slt:Slit_0337 TatD-related deoxyribonuclease
YP_003846333.1	TIGRFAM: chorismate synthase; KEGG: slt:Slit_0339 chorismate synthase; PFAM: chorismate synthase
YP_003846334.1	KEGG: slt:Slit_0661 hypothetical protein
YP_003846335.1	KEGG: dac:Daci_2448 hypothetical protein
YP_003846336.1	KEGG: slt:Slit_0343 transmembrane protein
YP_003846337.1	PFAM: peptidase M48 Ste24p; KEGG: slt:Slit_0344 peptidase M48 Ste24p
YP_003846338.1	KEGG: slt:Slit_0345 ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31
YP_003846339.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: slt:Slit_0741 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
YP_003846340.1	KEGG: flavoprotein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase
YP_003846341.1	KEGG: slt:Slit_0742 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN
YP_003846342.1	KEGG: slt:Slit_0690 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003846343.1	PFAM: protein of unknown function DUF140; KEGG: slt:Slit_0691 protein of unknown function DUF140
YP_003846344.1	PFAM: Mammalian cell entry related domain protein; KEGG: slt:Slit_0692 mammalian cell entry related domain protein
YP_003846345.1	PFAM: toluene tolerance family protein; KEGG: slt:Slit_0693 toluene tolerance family protein
YP_003846346.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: slt:Slit_0694 anti-sigma-factor antagonist
YP_003846347.1	PFAM: BolA family protein; KEGG: bgl:bglu_1g03280 predicted transcriptional regulator, BolA superfamily protein
YP_003846348.1	KEGG: slt:Slit_0695 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YP_003846349.1	TIGRFAM: ATP phosphoribosyltransferase; KEGG: slt:Slit_0696 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region
YP_003846350.1	TIGRFAM: histidinol dehydrogenase; KEGG: slt:Slit_0697 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase
YP_003846351.1	KEGG: mei:Msip34_0299 translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain-containing protein; elongation factor Tu domain 2 protein
YP_003846352.1	KEGG: slt:Slit_0754 preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein
YP_003846353.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: slt:Slit_0755 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein
YP_003846354.1	TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: slt:Slit_0756 ribosomal protein L11; SMART: ribosomal protein L11
YP_003846355.1	KEGG: slt:Slit_0757 ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1
YP_003846356.1	KEGG: slt:Slit_0758 ribosomal protein L10; manually curated; PFAM: ribosomal protein L10
YP_003846357.1	KEGG: mei:Msip34_0293 ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12
YP_003846358.1	KEGG: slt:Slit_0760 DNA-directed RNA polymerase, beta subunit; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 7; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain
YP_003846359.1	TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 4; KEGG: slt:Slit_0761 DNA-directed RNA polymerase, beta' subunit; SMART: RNA polymerase I subunit A domain protein
YP_003846360.1	KEGG: mmb:Mmol_0340 ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23
YP_003846361.1	KEGG: slt:Slit_0763 ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7
YP_003846362.1	KEGG: slt:Slit_0764 translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein
YP_003846363.1	KEGG: mei:Msip34_0299 translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain-containing protein; elongation factor Tu domain 2 protein
YP_003846364.1	KEGG: slt:Slit_0766 ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10
YP_003846365.1	KEGG: slt:Slit_0767 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3
YP_003846366.1	PFAM: ribosomal protein L4/L1e; KEGG: slt:Slit_0768 ribosomal protein L4/L1e
YP_003846367.1	PFAM: Ribosomal protein L25/L23; KEGG: slt:Slit_0769 ribosomal protein L25/L23
YP_003846368.1	KEGG: slt:Slit_0770 ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2
YP_003846369.1	KEGG: slt:Slit_0771 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15
YP_003846370.1	KEGG: slt:Slit_0772 ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17
YP_003846371.1	TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: slt:Slit_0773 ribosomal protein S3; SMART: KH domain protein
YP_003846372.1	KEGG: slt:Slit_0774 ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16
YP_003846373.1	KEGG: slt:Slit_0775 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29
YP_003846374.1	KEGG: slt:Slit_0776 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17
YP_003846375.1	KEGG: lch:Lcho_3939 ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e
YP_003846376.1	KEGG: slt:Slit_0778 ribosomal protein L24; TIGRFAM: ribosomal protein L24; SMART: KOW domain protein
YP_003846377.1	KEGG: slt:Slit_0779 ribosomal protein L5
YP_003846378.1	PFAM: ribosomal protein S14; KEGG: slt:Slit_0780 ribosomal protein S14
YP_003846379.1	PFAM: ribosomal protein S8; KEGG: slt:Slit_0781 ribosomal protein S8
YP_003846380.1	KEGG: slt:Slit_0782 ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain
YP_003846381.1	KEGG: slt:Slit_0783 ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E
YP_003846382.1	KEGG: slt:Slit_0784 ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5
YP_003846383.1	KEGG: slt:Slit_0785 ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30
YP_003846384.1	KEGG: slt:Slit_0786 ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15
YP_003846385.1	KEGG: slt:Slit_0787 preprotein translocase, SecY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein
YP_003846386.1	KEGG: rso:RSc2998 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein
YP_003846387.1	manually curated; TIGRFAM: ribosomal protein L36; KEGG: azo:azo3395 ribosomal protein L36; PFAM: ribosomal protein L36
YP_003846388.1	KEGG: slt:Slit_0790 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13
YP_003846389.1	KEGG: slt:Slit_0791 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11
YP_003846390.1	TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: slt:Slit_0792 ribosomal protein S4; SMART: RNA-binding S4 domain protein
YP_003846391.1	TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase insert; RNA polymerase dimerisation; KEGG: slt:Slit_0793 DNA-directed RNA polymerase, alpha subunit; SMART: RNA polymerase RpoA/D/Rpb3-type
YP_003846392.1	KEGG: slt:Slit_0794 ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17
YP_003846393.1	KEGG: mmb:Mmol_0796 cysteine synthase A; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_003846394.1	KEGG: slt:Slit_2351 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related
YP_003846395.1	TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; KEGG: slt:Slit_0453 biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein
YP_003846396.1	KEGG: slt:Slit_0454 transcriptional activator, Baf family; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor
YP_003846397.1	KEGG: slt:Slit_0455 sporulation domain protein
YP_003846398.1	KEGG: slt:Slit_0457 hypothetical protein
YP_003846399.1	KEGG: slt:Slit_0456 hypothetical protein
YP_003846400.1	KEGG: azo:azo2270 methyl-accepting chemotaxis transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003846401.1	TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Radical SAM domain protein; protein of unknown function UPF0004 ; deoxyribonuclease/rho motif-related TRAM; KEGG: slt:Slit_0458 tRNA-i(6)A37 thiotransferase enzyme MiaB; SMART: Elongator protein 3/MiaB/NifB
YP_003846402.1	PFAM: protein of unknown function UPF0054; KEGG: slt:Slit_0460 protein of unknown function UPF0054
YP_003846403.1	PFAM: transporter-associated region; CBS domain containing protein; KEGG: slt:Slit_0461 CBS domain containing protein
YP_003846404.1	PFAM: sodium/hydrogen exchanger; KEGG: slt:Slit_2865 sodium/hydrogen exchanger
YP_003846406.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2314 MFS permease
YP_003846407.1	TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: cvi:CV_1413 pyruvate formate lyase activating enzyme; PFAM: Radical SAM domain protein
YP_003846408.1	TIGRFAM: formate acetyltransferase; KEGG: cvi:CV_1412 formate C-acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical
YP_003846409.1	PFAM: protein of unknown function UPF0118; KEGG: net:Neut_2276 hypothetical protein
YP_003846410.1	KEGG: slt:Slit_0944 DnaA regulatory inactivator Hda; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA
YP_003846411.1	TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: slt:Slit_0946 HAD-superfamily subfamily IB hydrolase, TIGR01490
YP_003846412.1	KEGG: pgu:PGUG_03470 similar to heat shock protein Hsp104
YP_003846413.1	TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein; transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: slt:Slit_2233 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein
YP_003846414.1	KEGG: slt:Slit_2231 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_003846415.1	KEGG: slt:Slit_2230 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase
YP_003846416.1	PFAM: peptidase M22 glycoprotease; KEGG: slt:Slit_2229 peptidase M22 glycoprotease
YP_003846417.1	KEGG: slt:Slit_2228 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_003846418.1	KEGG: mfa:Mfla_0414 phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily
YP_003846419.1	PFAM: major facilitator superfamily MFS_1; KEGG: slt:Slit_2143 major facilitator superfamily MFS_1
YP_003846420.1	TIGRFAM: alanine racemase; KEGG: slt:Slit_2142 alanine racemase; PFAM: alanine racemase domain protein
YP_003846421.1	PFAM: type IV pilus assembly PilZ; KEGG: slt:Slit_1652 type IV pilus assembly PilZ
YP_003846422.1	TIGRFAM: methylthioadenosine phosphorylase; KEGG: slt:Slit_1475 methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1
YP_003846423.1	KEGG: nmu:Nmul_A0935 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_003846424.1	TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: rpa:RPA4820 methylthioribose-1-phosphate isomerase; PFAM: initiation factor 2B related
YP_003846425.1	PFAM: class II aldolase/adducin family protein; KEGG: mei:Msip34_0855 class II aldolase/adducin family protein
YP_003846426.1	KEGG: srm:SRM_00767 hypothetical protein
YP_003846427.1	PFAM: PemK family protein; KEGG: srm:SRM_00768 hypothetical protein
YP_003846428.1	KEGG: slt:Slit_2076 uncharacterized conserved protein UCP015557; TIGRFAM: uncharacterized conserved protein UCP015557; PFAM: uncharacterized conserved protein UCP015557
YP_003846429.1	TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein; KEGG: slt:Slit_2075 translation elongation factor P; SMART: Elongation factor P
YP_003846430.1	KEGG: neu:NE2030 ADP-glucose pyrophosphorylase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase
YP_003846431.1	PFAM: Class I peptide chain release factor; KEGG: slt:Slit_2317 class I peptide chain release factor
YP_003846432.1	KEGG: slt:Slit_0798 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related
YP_003846433.1	PFAM: protein of unknown function DUF28; KEGG: psa:PST_1582 hypothetical protein
YP_003846434.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: hch:HCH_05989 signal transduction protein
YP_003846435.1	PFAM: major facilitator superfamily MFS_1; KEGG: slt:Slit_0799 major facilitator superfamily MFS_1
YP_003846436.1	KEGG: pna:Pnap_2839 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein
YP_003846437.1	KEGG: pnu:Pnuc_0581 hypothetical protein
YP_003846438.1	KEGG: slt:Slit_0830 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein
YP_003846439.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: slt:Slit_0831 peptidase S24/S26A/S26B, conserved region
YP_003846440.1	KEGG: slt:Slit_2300 LexA repressor; TIGRFAM: LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region
YP_003846441.1	KEGG: slt:Slit_1789 hypothetical protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_003846442.1	KEGG: slt:Slit_2281 hypothetical protein
YP_003846443.1	TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: nmu:Nmul_A0670 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein
YP_003846444.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; hemerythrin-like metal-binding protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: slt:Slit_2342 diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain; SMART: GGDEF domain containing protein; PAS domain containing protein
YP_003846445.1	PFAM: inositol monophosphatase; KEGG: slt:Slit_2259 inositol monophosphatase
YP_003846446.1	KEGG: slt:Slit_2258 RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU)
YP_003846447.1	TIGRFAM: serine O-acetyltransferase; KEGG: slt:Slit_2257 serine O-acetyltransferase
YP_003846448.1	KEGG: slt:Slit_2256 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074
YP_003846449.1	TIGRFAM: cysteine desulfurase IscS; KEGG: slt:Slit_2255 cysteine desulfurase IscS; PFAM: aminotransferase class V
YP_003846450.1	KEGG: azo:azo2015 scaffold protein; TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein
YP_003846451.1	KEGG: slt:Slit_2253 iron-sulfur cluster assembly protein IscA; TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein
YP_003846452.1	TIGRFAM: co-chaperone Hsc20; PFAM: HSC20 oligomerisation; heat shock protein DnaJ domain protein; KEGG: slt:Slit_2252 co-chaperone Hsc20; SMART: heat shock protein DnaJ domain protein
YP_003846453.1	KEGG: slt:Slit_2251 Fe-S protein assembly chaperone HscA; TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70
YP_003846454.1	KEGG: rme:Rmet_1030 ferredoxin, 2Fe-2S type; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin
YP_003846455.1	KEGG: slt:Slit_2249 FeS assembly protein IscX; TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528
YP_003846456.1	PFAM: Disulphide bond formation protein DsbB; KEGG: slt:Slit_2248 disulfide bond formation protein DsbB
YP_003846457.1	KEGG: sew:SeSA_A2900 hypothetical protein
YP_003846458.1	TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; KEGG: slt:Slit_1765 excinuclease ABC, B subunit; SMART: DEAD-like helicase ; helicase domain protein
YP_003846459.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003846460.1	TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: tbd:Tbd_1500 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase
YP_003846461.1	PFAM: protein of unknown function DUF336; KEGG: slt:Slit_1360 protein of unknown function DUF336
YP_003846462.1	KEGG: slt:Slit_1361 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein
YP_003846463.1	TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: slt:Slit_1362 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase
YP_003846464.1	PFAM: protein of unknown function DUF343; KEGG: slt:Slit_1363 protein of unknown function DUF343
YP_003846465.1	TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: slt:Slit_1364 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase
YP_003846466.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: slt:Slit_1365 biopolymer transport protein ExbD/TolR
YP_003846467.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: slt:Slit_1366 MotA/TolQ/ExbB proton channel
YP_003846468.1	TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: slt:Slit_1367 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type
YP_003846469.1	KEGG: mei:Msip34_0727 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase
YP_003846470.1	PFAM: Methyltransferase type 11; KEGG: nmu:Nmul_A0287 generic methyltransferase
YP_003846471.1	PFAM: glycosyl transferase family 39; KEGG: slt:Slit_1368 glycosyl transferase family 39
YP_003846472.1	PFAM: small multidrug resistance protein; KEGG: slt:Slit_1369 protein of unknown function DUF6 transmembrane
YP_003846473.1	KEGG: slt:Slit_1370 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase
YP_003846474.1	KEGG: slt:Slit_2199 radical SAM domain protein
YP_003846475.1	PFAM: glycosyl transferase family 2; KEGG: slt:Slit_1372 glycosyl transferase family 2
YP_003846476.1	PFAM: formyl transferase domain protein; KEGG: slt:Slit_1373 formyl transferase domain protein
YP_003846477.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: slt:Slit_1374 NAD-dependent epimerase/dehydratase
YP_003846478.1	PFAM: polysaccharide deacetylase; KEGG: slt:Slit_1375 polysaccharide deacetylase
YP_003846479.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: slt:Slit_1376 putative signal transduction protein
YP_003846480.1	KEGG: glo:Glov_1430 hypothetical protein
YP_003846481.1	KEGG: glo:Glov_1431 phage integrase family protein
YP_003846482.1	PFAM: NERD domain protein; KEGG: cti:RALTA_B0260 conserved hypothetical protein; putative helicase
YP_003846483.1	KEGG: cti:RALTA_B0259 hypothetical protein
YP_003846484.1	KEGG: mpt:Mpe_B0179 hypothetical protein
YP_003846485.1	KEGG: pna:Pnap_4589 hypothetical protein
YP_003846486.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: pna:Pnap_4588 cell divisionFtsK/SpoIIIE
YP_003846487.1	PFAM: type III restriction protein res subunit; KEGG: msm:MSMEG_1238 type III restriction enzyme, res subunit
YP_003846488.1	PFAM: ATP-binding region ATPase domain protein; KEGG: ava:Ava_B0306 hypothetical protein
YP_003846489.1	KEGG: chu:CHU_0813 hypothetical protein
YP_003846490.1	PFAM: phosphoadenosine phosphosulfate reductase; KEGG: pna:Pnap_4585 phosphoadenosine phosphosulfate reductase
YP_003846491.1	KEGG: tmz:Tmz1t_2113 putative ATP-binding protein
YP_003846492.1	KEGG: tmz:Tmz1t_2114 hypothetical protein
YP_003846493.1	KEGG: bbu:BB0106 hypothetical protein
YP_003846495.1	PFAM: TOPRIM domain-containing protein; DNA topoisomerase type IA central domain protein; KEGG: eca:ECA0525 DNA topoisomerase III; SMART: DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; DNA topoisomerase I DNA-binding
YP_003846497.1	KEGG: tbd:Tbd_1587 sensor protein
YP_003846498.1	KEGG: nar:Saro_0597 4-hydroxyphenylpyruvate dioxygenase
YP_003846501.1	KEGG: bgl:bglu_3p0820 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase
YP_003846502.1	PFAM: Integrase catalytic region; KEGG: maq:Maqu_1224 integrase catalytic subunit
YP_003846503.1	KEGG: fgr:FG07974.1 hypothetical protein
YP_003846504.1	PFAM: Protein of unknown function DUF2946; KEGG: slt:Slit_1862 hypothetical protein
YP_003846505.1	PFAM: outer membrane efflux protein; KEGG: slt:Slit_1863 outer membrane efflux protein
YP_003846506.1	KEGG: slt:Slit_1864 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: Copper binding periplasmic protein CusF
YP_003846507.1	KEGG: ajs:Ajs_2703 CzcA family heavy metal efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_003846508.1	PFAM: protein of unknown function DUF411; KEGG: rcu:RCOM_1952370 hypothetical protein
YP_003846509.1	KEGG: rcu:RCOM_2011350 hypothetical protein
YP_003846510.1	KEGG: dar:Daro_2273 hypothetical protein
YP_003846511.1	KEGG: dar:Daro_2274 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003846512.1	KEGG: mta:Moth_1992 hypothetical protein
YP_003846513.1	KEGG: pol:Bpro_1181 hypothetical protein
YP_003846514.1	TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; YHS domain-containing protein; Haloacid dehalogenase domain protein hydrolase; KEGG: slt:Slit_1868 copper-translocating P-type ATPase; SMART: TRASH domain-containing protein
YP_003846515.1	PFAM: Protein of unknown function DUF2933; KEGG: bvi:Bcep1808_7279 hypothetical protein
YP_003846516.1	KEGG: rfr:Rfer_0419 hypothetical protein
YP_003846517.1	PFAM: YHS domain-containing protein; KEGG: sde:Sde_1941 hypothetical protein
YP_003846519.1	TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: bpy:Bphyt_3000 integration host factor subunit beta; SMART: histone family protein DNA-binding protein
YP_003846521.1	KEGG: geo:Geob_3236 AMP-dependent synthetase and ligase
YP_003846522.1	KEGG: dpe:Dper_GL26996 GL26996 gene product from transcript GL26996-RA
YP_003846523.1	KEGG: pmr:PMI2437 plasmid-related protein
YP_003846524.1	KEGG: xla:397818 caspase 6, apoptosis-related cysteine peptidase
YP_003846525.1	KEGG: eba:ebA573 IS4 family transposase
YP_003846526.1	PFAM: Prophage CP4-57 regulatory; KEGG: nmu:Nmul_A2182 phage transcriptional regulator, AlpA
YP_003846527.1	KEGG: CHC2 zinc finger family protein
YP_003846528.1	PFAM: protein of unknown function DUF927; KEGG: cvi:CV_3857 hypothetical protein
YP_003846529.1	KEGG: cti:pRALTA_0477 hypothetical protein
YP_003846530.1	KEGG: cti:pRALTA_0478 hypothetical protein
YP_003846531.1	KEGG: nhl:Nhal_3523 hypothetical protein
YP_003846532.1	KEGG: eba:ebA5523 transposase
YP_003846533.1	PFAM: IS66 Orf2 family protein; KEGG: hna:Hneap_2256 IS66 Orf2 family protein
YP_003846534.1	PFAM: transposase IS3/IS911 family protein; KEGG: rpf:Rpic12D_2977 transposase IS3/IS911 family protein
YP_003846535.1	PFAM: integrase family protein; KEGG: pol:Bpro_1318 phage integrase
YP_003846536.1	KEGG: smd:Smed_6450 CopG family transcriptional regulator
YP_003846537.1	PFAM: plasmid stabilization system; KEGG: rec:RHECIAT_PC0000504 putative plasmid stabilization protein
YP_003846538.1	KEGG: har:HEAR0582 putative RNA-binding protein
YP_003846539.1	KEGG: azo:azo0460 putative Dnr-like transcriptional activator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_003846540.1	PFAM: cytochrome c class II; KEGG: slt:Slit_2136 hypothetical protein
YP_003846541.1	KEGG: pph:Ppha_2270 hypothetical protein
YP_003846543.1	PFAM: protein of unknown function DUF891; KEGG: bte:BTH_I3275 hypothetical protein
YP_003846544.1	KEGG: bte:BTH_I3276 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_003846545.1	PFAM: NERD domain protein; KEGG: cyn:Cyan7425_3205 NERD domain protein
YP_003846546.1	KEGG: mmb:Mmol_1821 hypothetical protein
YP_003846547.1	KEGG: rme:Rmet_0707 hypothetical protein
YP_003846548.1	KEGG: mex:Mext_3539 hypothetical protein
YP_003846549.1	KEGG: ang:An18g06260 hypothetical protein
YP_003846550.1	TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; KEGG: dar:Daro_1787 HDIG; SMART: metal-dependent phosphohydrolase HD region
YP_003846551.1	KEGG: dar:Daro_1786 hypothetical protein
YP_003846552.1	KEGG: lch:Lcho_2744 PAS/PAC sensor signal transduction histidine kinase; PFAM: histidine kinase A domain protein; SMART: histidine kinase A domain protein
YP_003846553.1	KEGG: lch:Lcho_0734 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003846554.1	KEGG: dia:Dtpsy_0962 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region
YP_003846555.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: aba:Acid345_4059 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAC repeat-containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein; Hpt domain protein
YP_003846556.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: lch:Lcho_4212 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein
YP_003846557.1	KEGG: lch:Lcho_4212 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein
YP_003846558.1	KEGG: dar:Daro_3685 periplasmic binding protein-related protein
YP_003846559.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: mei:Msip34_1854 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003846560.1	KEGG: lch:Lcho_0734 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003846561.1	TIGRFAM: DNA binding domain protein, excisionase family; PFAM: response regulator receiver; KEGG: reu:Reut_B5042 excisionase/Xis, DNA-binding; SMART: response regulator receiver
YP_003846562.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: dar:Daro_3006 PAS; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; Hpt domain protein
YP_003846563.1	KEGG: alv:Alvin_1370 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003846564.1	KEGG: dfe:Dfer_3322 domain of unknown function DUF1745; PFAM: domain of unknown function DUF1745; FIST C domain; SMART: domain of unknown function DUF1745
YP_003846565.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: tau:Tola_1314 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein
YP_003846566.1	KEGG: met:M446_2865 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074
YP_003846567.1	KEGG: nis:NIS_1797 hypothetical protein
YP_003846568.1	PFAM: cytochrome c class I; KEGG: mca:MCA2401 hypothetical protein
YP_003846569.1	KEGG: mca:MCA2400 nitric-oxide reductase, B subunit, putative; PFAM: cytochrome c oxidase subunit I
YP_003846570.1	PFAM: NnrS family protein; KEGG: slt:Slit_1132 NnrS family protein
YP_003846571.1	KEGG: glo:Glov_1041 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer
YP_003846572.1	manually curated; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mmb:Mmol_2054 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region
YP_003846573.1	KEGG: putative PAS/PAC sensor protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003846574.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: slt:Slit_0546 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein
YP_003846575.1	KEGG: lif:LinJ21.0760 hypothetical protein
YP_003846576.1	TIGRFAM: DNA binding domain protein, excisionase family; PFAM: response regulator receiver; KEGG: mmb:Mmol_0814 response regulator receiver protein; SMART: response regulator receiver
YP_003846577.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_0040 binding-protein-dependent transport systems inner membrane component
YP_003846578.1	KEGG: pna:Pnap_0039 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003846579.1	KEGG: slt:Slit_0078 UreA carboxylase-associated protein 2; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989
YP_003846580.1	KEGG: slt:Slit_0079 UreA carboxylase-associated protein 1; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989
YP_003846581.1	TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; KEGG: slt:Slit_0080 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; biotin carboxylase domain protein; Allophanate hydrolase subunit 1
YP_003846582.1	KEGG: slt:Slit_0081 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase
YP_003846583.1	PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: slt:Slit_0082 xylose isomerase domain protein TIM barrel
YP_003846584.1	KEGG: vei:Veis_4767 NlpA lipoprotein
YP_003846585.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: slt:Slit_0083 protein of unknown function DUF6 transmembrane
YP_003846587.1	KEGG: sha:SH1849 hypothetical protein
YP_003846588.1	PFAM: type IV pilus assembly PilZ; KEGG: mei:Msip34_1886 type IV pilus assembly PilZ
YP_003846589.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmb:Mmol_0777 BFD domain protein (2Fe-2S)-binding domain protein
YP_003846590.1	PFAM: protein of unknown function DUF1653; KEGG: slt:Slit_2267 protein of unknown function DUF1653
YP_003846591.1	KEGG: slt:Slit_1172 cysteine synthase; TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_003846592.1	KEGG: slt:Slit_2120 FimV N-terminal domain protein
YP_003846593.1	KEGG: slt:Slit_1312 ankyrin; PFAM: Ankyrin; SMART: Ankyrin
YP_003846594.1	PFAM: cell wall hydrolase/autolysin; Localisation of periplasmic protein complexes; KEGG: slt:Slit_1178 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin
YP_003846595.1	PFAM: uncharacterized protein family UPF0079, ATPase; KEGG: slt:Slit_1179 protein of unknown function UPF0079
YP_003846596.1	KEGG: mei:Msip34_1283 iron-sulfur cluster binding protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730
YP_003846597.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: slt:Slit_2864 ATPase, P-type (transporting), HAD superfamily, subfamily IC; SMART: cation transporting ATPase domain protein
YP_003846598.1	PFAM: dihydrodipicolinate reductase; KEGG: tau:Tola_0988 dihydrodipicolinate reductase
YP_003846599.1	PFAM: protein of unknown function DUF389; KEGG: slt:Slit_0917 hypothetical protein
YP_003846600.1	PFAM: Citrate transporter; KEGG: dar:Daro_0683 Na+/H+ antiporter
YP_003846601.1	KEGG: rha:RHA1_ro05240 ammonia monooxygenase
YP_003846602.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: slt:Slit_1755 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_003846603.1	KEGG: slt:Slit_1754 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_003846604.1	PFAM: peptidase S49; KEGG: slt:Slit_1753 peptidase S49
YP_003846605.1	KEGG: slt:Slit_1751 arylesterase; PFAM: lipolytic protein G-D-S-L family
YP_003846606.1	KEGG: slt:Slit_1750 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003846607.1	PFAM: protein of unknown function DUF214; KEGG: slt:Slit_1748 protein of unknown function DUF214
YP_003846608.1	KEGG: app:CAP2UW1_1539 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding
YP_003846609.1	KEGG: slt:Slit_1532 3-oxoacyl-(acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase
YP_003846610.1	KEGG: slt:Slit_1533 aminodeoxychorismate lyase; TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV
YP_003846611.1	PFAM: aminodeoxychorismate lyase; KEGG: cti:RALTA_A1494 putative aminodeoxychorismate lyase; putative exported protein
YP_003846612.1	TIGRFAM: thymidylate kinase; KEGG: slt:Slit_1535 thymidylate kinase; PFAM: thymidylate kinase
YP_003846613.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: slt:Slit_1536 DNA polymerase III, delta prime subunit
YP_003846614.1	KEGG: nmu:Nmul_A1381 TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease
YP_003846615.1	KEGG: pno:SNOG_08644 hypothetical protein
YP_003846616.1	KEGG: aga:AgaP_AGAP008760 AGAP008760-PA
YP_003846617.1	KEGG: putative DNA helicase
YP_003846618.1	KEGG: tbd:Tbd_1824 hypothetical protein
YP_003846619.1	KEGG: tmz:Tmz1t_4058 hypothetical protein
YP_003846620.1	KEGG: ank:AnaeK_4051 outer membrane efflux protein
YP_003846621.1	KEGG: bxe:Bxe_B1207 hypothetical protein
YP_003846622.1	PFAM: integrase family protein; KEGG: dma:DMR_14550 site-specific recombinase
YP_003846623.1	KEGG: dae:Dtox_3270 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_003846624.1	KEGG: mxa:MXAN_0028 hypothetical protein
YP_003846625.1	KEGG: ppd:Ppro_0048 hypothetical protein
YP_003846626.1	PFAM: HPr serine kinase domain-containing protein; KEGG: ppd:Ppro_0056 HPr kinase
YP_003846627.1	PFAM: sulfotransferase; KEGG: ppd:Ppro_0057 sulfotransferase
YP_003846628.1	PFAM: asparagine synthase; KEGG: ppd:Ppro_0050 asparagine synthase
YP_003846629.1	KEGG: ppd:Ppro_0049 hypothetical protein
YP_003846630.1	manually curated; KEGG: xac:XAC0058 hypothetical protein
YP_003846631.1	KEGG: dae:Dtox_3271 hypothetical protein
YP_003846632.1	PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_4962 transposase IS3/IS911 family protein
YP_003846633.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-4 domain protein; CBS domain containing protein; PAS fold domain protein; response regulator receiver; GGDEF domain containing protein; KEGG: dar:Daro_0972 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; CBS domain containing protein; GAF domain protein
YP_003846634.1	KEGG: dar:Daro_0970 response regulator receiver; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region
YP_003846635.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hemerythrin HHE cation binding domain protein; KEGG: slt:Slit_1302 histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003846636.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: dar:Daro_0971 PAS; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein; GAF domain protein
YP_003846637.1	KEGG: net:Neut_1560 transcription elongation factor GreB; TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain-containing protein
YP_003846638.1	PFAM: nitrogen regulatory protein P-II; KEGG: slt:Slit_1653 nitrogen regulatory protein P-II
YP_003846639.1	SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: slt:Slit_1465 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein
YP_003846640.1	KEGG: slt:Slit_1466 GMP synthase, large subunit; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I
YP_003846641.1	KEGG: app:CAP2UW1_1429 transposase
YP_003846642.1	KEGG: slt:Slit_2042 cytochrome c class I
YP_003846644.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: lch:Lcho_1138 oxidoreductase FAD/NAD(P)-binding subunit
YP_003846645.1	KEGG: rfr:Rfer_0498 hypothetical protein
YP_003846646.1	PFAM: Cytochrome c, class III, conserved region; KEGG: lch:Lcho_1136 hypothetical protein
YP_003846647.1	KEGG: bbt:BBta_7269 hypothetical protein
YP_003846648.1	KEGG: gbe:GbCGDNIH1_1797 transposase
YP_003846649.1	PFAM: transposase IS4 family protein; KEGG: app:CAP2UW1_3182 transposase IS4 family protein
YP_003846650.1	KEGG: slt:Slit_1013 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein
YP_003846651.1	KEGG: slt:Slit_1012 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003846652.1	KEGG: dar:Daro_1035 hypothetical protein
YP_003846653.1	PFAM: regulatory protein MarR; KEGG: sme:SMa2167 hypothetical protein
YP_003846654.1	KEGG: dar:Daro_2627 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003846655.1	KEGG: app:CAP2UW1_4548 heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_003846656.1	PFAM: nitrogen regulatory protein P-II; KEGG: dar:Daro_2625 nitrogen regulatory protein P-II
YP_003846657.1	PFAM: Protein of unknown function DUF2078, membrane; KEGG: afe:Lferr_0211 hypothetical protein
YP_003846658.1	PFAM: protein of unknown function DUF302; KEGG: afe:Lferr_0210 protein of unknown function DUF302
YP_003846659.1	PFAM: ferric-uptake regulator; KEGG: slt:Slit_2531 ferric uptake regulator, Fur family
YP_003846660.1	KEGG: slt:Slit_2530 hypothetical protein
YP_003846661.1	PFAM: iron permease FTR1; KEGG: slt:Slit_2529 iron permease FTR1
YP_003846662.1	KEGG: mvu:Metvu_0232 hypothetical protein
YP_003846663.1	KEGG: mms:mma_1796 cation-translocating P-type ATPase; TIGRFAM: cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase
YP_003846665.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE2274 hypothetical protein
YP_003846666.1	PFAM: Replication initiator protein A; KEGG: sjp:SJA_P2-00010 plasmid replication initiator protein RepA
YP_003846668.1	KEGG: tet:TTHERM_00138460 ATP-dependent metalloprotease FtsH family protein
YP_003846669.1	KEGG: vex:VEA_000728 putative integral membrane protein
YP_003846670.1	KEGG: see:SNSL254_p_0066 type IV conjugative transfer system protein TraD
YP_003846671.1	KEGG: shw:Sputw3181_1101 hypothetical protein
YP_003846672.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: cvi:CV_2461 hypothetical protein
YP_003846673.1	KEGG: mpt:Mpe_B0289 hypothetical protein
YP_003846674.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: swo:Swol_0117 alginate O-acetyltransferase, putative
YP_003846675.1	KEGG: cbk:CLL_A3009 hypothetical protein
YP_003846676.1	manually curated; KEGG: slt:Slit_2773 hypothetical protein
YP_003846677.1	KEGG: slt:Slit_2045 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein
YP_003846678.1	putative inner membrane; KEGG: bvi:Bcep1808_2019 hypothetical protein; manually curated; PFAM: Protein of unkown function DUF1819 putative inner membrane
YP_003846679.1	PFAM: Domain of unknown function DUF1788; KEGG: eba:ebA5221 putative cytoplasmic protein
YP_003846680.1	KEGG: tmz:Tmz1t_0292 ATPase-like protein
YP_003846681.1	KEGG: tmz:Tmz1t_0293 hypothetical protein
YP_003846682.1	PFAM: Domain of unknown function DUF1814; KEGG: tmz:Tmz1t_0294 hypothetical protein
YP_003846683.1	KEGG: aby:p3ABAYE0069 putative restriction enzyme
YP_003846684.1	PFAM: protein of unknown function DUF1016; KEGG: chu:CHU_2940 hypothetical protein
YP_003846685.1	KEGG: dps:DP1337 hypothetical protein
YP_003846686.1	KEGG: hha:Hhal_1149 hypothetical protein
YP_003846687.1	PFAM: SMC domain protein; KEGG: pfo:Pfl01_2290 hypothetical protein
YP_003846688.1	KEGG: pfo:Pfl01_2289 hypothetical protein
YP_003846689.1	PFAM: AAA-4 family protein; KEGG: lpn:lpg2559 ATP-dependent DNA helicase
YP_003846691.1	PFAM: PglZ domain protein; KEGG: pol:Bpro_5031 hypothetical protein
YP_003846692.1	KEGG: bvi:Bcep1808_2012 hypothetical protein
YP_003846693.1	KEGG: xau:Xaut_0561 hypothetical protein
YP_003846694.1	KEGG: bur:Bcep18194_C6602 hypothetical protein
YP_003846695.1	KEGG: rcu:RCOM_2051300 hypothetical protein
YP_003846696.1	KEGG: bid:Bind_2001 hypothetical protein
YP_003846697.1	KEGG: fjo:Fjoh_3657 hypothetical protein
YP_003846698.1	KEGG: dfe:Dfer_4058 TonB family protein
YP_003846699.1	KEGG: mmw:Mmwyl1_1046 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; SMART: dihydroneopterin aldolase
YP_003846700.1	KEGG: reu:Reut_A0790 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase
YP_003846701.1	KEGG: mms:mma_0750 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein
YP_003846702.1	KEGG: mms:mma_0749 MetE/MetH family transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR
YP_003846703.1	KEGG: app:CAP2UW1_3942 hypothetical protein
YP_003846704.1	manually curated; KEGG: alv:Alvin_3256 Wgr
YP_003846705.1	PFAM: integrase family protein; Protein of unknown function DUF3701; KEGG: rpf:Rpic12D_5076 integrase family protein
YP_003846706.1	KEGG: ajs:Ajs_4163 hypothetical protein
YP_003846707.1	KEGG: shw:Sputw3181_1078 hypothetical protein
YP_003846708.1	PFAM: StbA family protein; KEGG: shw:Sputw3181_1079 hypothetical protein
YP_003846709.1	KEGG: vcj:VCD_003688 hypothetical protein
YP_003846710.1	KEGG: bac:BamMC406_6795 UvrD/REP helicase; manually curated; PFAM: UvrD/REP helicase
YP_003846711.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: afr:AFE_2033 hypothetical protein
YP_003846712.1	KEGG: cag:Cagg_1431 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003846713.1	KEGG: tye:THEYE_A0754 heme exporter protein B, putative
YP_003846714.1	KEGG: tye:THEYE_A0753 hypothetical protein
YP_003846715.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003846716.1	KEGG: gur:Gura_3561 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003846717.1	PFAM: cation transporting ATPase domain protein; KEGG: mmi:MMAR_2578 metal cation transporter p-type ATPase A, CtpF
YP_003846718.1	KEGG: cte:CT0194 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein
YP_003846719.1	KEGG: cte:CT0195 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003846720.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: asu:Asuc_1606 hypothetical protein
YP_003846721.1	PFAM: transposase IS3/IS911 family protein; KEGG: bcj:BCAL3252 putative transposase
YP_003846722.1	manually curated; KEGG: app:CAP2UW1_4683 hypothetical protein
YP_003846723.1	PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_1329 cobalt-zinc-cadmium outer membrane resistance protein
YP_003846724.1	KEGG: tbd:Tbd_1328 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003846725.1	PFAM: nitrogen regulatory protein P-II; KEGG: har:HEAR1599 regulatory protein PII
YP_003846726.1	KEGG: tbd:Tbd_1327 heavy metal efflux pump CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_003846727.1	KEGG: ajs:Ajs_1872 hypothetical protein
YP_003846728.1	PFAM: MgtC/SapB transporter; KEGG: mms:mma_1768 MgtC family protein
YP_003846729.1	KEGG: art:Arth_4449 heavy metal translocating P-type ATPase; TIGRFAM: cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase
YP_003846730.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE2274 hypothetical protein
YP_003846731.1	KEGG: rha:RHA1_ro06648 DNA-damage-inducible protein F ( multi anti extrusion protein MatE)
YP_003846732.1	KEGG: hna:Hneap_0280 hypothetical protein
YP_003846733.1	PFAM: Protein of unknown function DUF3423; KEGG: net:Neut_1817 hypothetical protein
YP_003846734.1	KEGG: mpt:Mpe_B0383 hypothetical protein
YP_003846735.1	KEGG: bvi:Bcep1808_6736 conjugal transfer mating pair stabilization protein TraN
YP_003846736.1	KEGG: bvi:Bcep1808_6737 hypothetical protein
YP_003846737.1	KEGG: ajs:Ajs_4173 hypothetical protein; TIGRFAM: type-F conjugative transfer system pilin assembly protein TrbC; PFAM: Type-F conjugative transfer system pilin assembly protein TrbC
YP_003846738.1	PFAM: TraU family protein; KEGG: bcj:pBCA031 putative TraU conjugative transfer protein precursor
YP_003846739.1	TIGRFAM: type-F conjugative transfer system protein TraW; KEGG: dar:Daro_2324 hypothetical protein
YP_003846740.1	PFAM: Relaxase; KEGG: pmr:PMI2476 plasmid conjugative relaxase
YP_003846741.1	PFAM: Peptidase S26, conserved region; KEGG: bch:Bcen2424_6803 type IV secretory pathway protease TraF-like protein
YP_003846742.1	KEGG: abn:AB57_2735 hypothetical protein
YP_003846743.1	KEGG: aau:AAur_1885 ROK family transcriptional regulator
YP_003846744.1	KEGG: oaa:100079290 similar to cancer antigen 1
YP_003846745.1	KEGG: bpt:Bpet0952 phage-related DNA recombination protein; TIGRFAM: RecT protein; PFAM: DNA single-strand annealing protein RecT-like
YP_003846746.1	KEGG: hsl:OE1699R oxidoreductase (geranylgeranyl hydrogenase homolog)
YP_003846747.1	KEGG: bgr:Bgr_05640 two-component sensor histidine kinase
YP_003846748.1	KEGG: slt:Slit_1965 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n
YP_003846749.1	PFAM: P4 alpha zinc-binding domain protein; KEGG: shw:Sputw3181_1162 phage P4 alpha zinc-binding domain-containing protein
YP_003846750.1	KEGG: eba:p1D4 hypothetical protein
YP_003846751.1	KEGG: afr:AFE_1221 modification methylase, putative
YP_003846752.1	KEGG: esi:Exig_0236 band 7 protein
YP_003846753.1	KEGG: tel:tlr0031 reverse transcriptase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; HNH endonuclease; SMART: HNH nuclease
YP_003846754.1	KEGG: slt:Slit_0752 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC
YP_003846755.1	KEGG: sbi:SORBI_03g046350 hypothetical protein
YP_003846756.1	KEGG: bvi:Bcep1808_7021 hypothetical protein
YP_003846757.1	manually curated; KEGG: mkm:Mkms_5793 hypothetical protein
YP_003846758.1	KEGG: blj:BLD_1543 beta-xylosidase
YP_003846759.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; helix-turn-helix Fis-type; KEGG: eba:p1B79 hypothetical protein; SMART: ParB domain protein nuclease
YP_003846760.1	TIGRFAM: PRTRC system protein E; KEGG: hypothetical protein
YP_003846761.1	KEGG: rpf:Rpic12D_5240 hypothetical protein
YP_003846762.1	KEGG: eba:p1B76 hypothetical protein
YP_003846763.1	KEGG: eba:p1B75 hypothetical protein
YP_003846764.1	PFAM: Domain of unknown function DUF2016; KEGG: eba:p1B74 hypothetical protein
YP_003846765.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: pol:Bpro_5068 UBA/ThiF-type NAD/FAD binding fold
YP_003846766.1	KEGG: vei:Veis_4532 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SMART: Helix-hairpin-helix DNA-binding class 1
YP_003846767.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: tmz:Tmz1t_0353 filamentation induced by cAMP protein Fic
YP_003846768.1	KEGG: bph:Bphy_5530 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_003846769.1	KEGG: bxe:Bxe_C1366 hypothetical protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein
YP_003846770.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: gme:Gmet_3085 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003846771.1	KEGG: bba:Bd0120 hypothetical protein
YP_003846772.1	KEGG: app:CAP2UW1_2697 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_003846773.1	TIGRFAM: diguanylate cyclase; PFAM: Metal-dependent hydrolase HDOD; GGDEF domain containing protein; response regulator receiver; KEGG: azo:azo1444 response regulator; SMART: GGDEF domain containing protein; response regulator receiver
YP_003846774.1	KEGG: slt:Slit_0547 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver
YP_003846775.1	KEGG: slt:Slit_0548 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver
YP_003846777.1	KEGG: slt:Slit_0549 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003846778.1	PFAM: Chemotaxis phosphatase CheZ; KEGG: slt:Slit_0550 chemotaxis phosphatase, CheZ
YP_003846779.1	KEGG: slt:Slit_0551 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; CheW domain protein
YP_003846780.1	KEGG: lch:Lcho_3101 hypothetical protein
YP_003846781.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: glo:Glov_0277 filamentation induced by cAMP protein Fic
YP_003846782.1	KEGG: bph:Bphy_7515 hypothetical protein
YP_003846783.1	KEGG: slt:Slit_1549 transcriptional regulator, XRE family
YP_003846784.1	TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: slt:Slit_1730 integration host factor, alpha subunit; SMART: histone family protein DNA-binding protein
YP_003846785.1	KEGG: dal:Dalk_3427 hypothetical protein
YP_003846786.1	KEGG: pmx:PERMA_0427 RNA polymerase sigma-54 factor
YP_003846787.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; PAS fold-4 domain protein; GGDEF domain containing protein; KEGG: slt:Slit_1460 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_003846788.1	KEGG: bmy:Bm1_43530 hypothetical protein
YP_003846790.1	KEGG: sat:SYN_02733 helix-turn-helix DNA binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_003846791.1	KEGG: bpt:Bpet0232 hypothetical protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein
YP_003846792.1	KEGG: tmz:Tmz1t_2397 hypothetical protein
YP_003846793.1	KEGG: vha:VIBHAR_01109 hypothetical protein
YP_003846794.1	KEGG: gur:Gura_2915 hypothetical protein
YP_003846795.1	KEGG: neu:NE2539 hypothetical protein
YP_003846796.1	KEGG: bpt:Bpet0231 transcriptional regulator
YP_003846797.1	KEGG: bpt:Bpet0232 hypothetical protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein
YP_003846798.1	KEGG: sjp:SJA_P1-00300 RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin
YP_003846799.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Metal-dependent hydrolase HDOD; KEGG: azo:azo1444 response regulator; SMART: GGDEF domain containing protein; response regulator receiver
YP_003846800.1	PFAM: flagellar transcriptional activator; KEGG: slt:Slit_0540 flagellar transcriptional activator
YP_003846801.1	PFAM: flagellar transcriptional activator FlhC; KEGG: slt:Slit_0541 flagellar transcriptional activator FlhC
YP_003846802.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: slt:Slit_0542 MotA/TolQ/ExbB proton channel
YP_003846803.1	PFAM: OmpA/MotB domain protein; KEGG: slt:Slit_0543 OmpA/MotB domain protein
YP_003846804.1	KEGG: slt:Slit_0544 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003846805.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; KEGG: slt:Slit_0546 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003846806.1	KEGG: slt:Slit_0545 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003846807.1	KEGG: slt:Slit_0545 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003846808.1	KEGG: slt:Slit_0547 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver
YP_003846809.1	KEGG: slt:Slit_0548 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver
YP_003846810.1	KEGG: slt:Slit_0549 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003846811.1	PFAM: Chemotaxis phosphatase CheZ; KEGG: slt:Slit_0550 chemotaxis phosphatase, CheZ
YP_003846812.1	KEGG: slt:Slit_0551 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein
YP_003846813.1	KEGG: dar:Daro_0724 chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_003846814.1	KEGG: dar:Daro_0725 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003846815.1	KEGG: net:Neut_1167 CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein
YP_003846816.1	KEGG: mmb:Mmol_1257 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein
YP_003846817.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; KEGG: dar:Daro_0729 PAS; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003846818.1	PFAM: MCP methyltransferase CheR-type; KEGG: mms:mma_2093 CheR chemotaxis protein methyltransferase; SMART: MCP methyltransferase CheR-type
YP_003846819.1	PFAM: CheD family protein; KEGG: tbd:Tbd_1616 chemoreceptor glutamine deamidase CheD
YP_003846820.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: rpf:Rpic12D_4166 response regulator receiver modulated CheB methylesterase; SMART: response regulator receiver
YP_003846821.1	KEGG: dar:Daro_0733 sulfate transporter/antisigma-factor antagonist STAS; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS
YP_003846822.1	KEGG: cvi:CV_2644 two-component response regulator; PFAM: Stage II sporulation protein E; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein
YP_003846823.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: swd:Swoo_2855 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver
YP_003846824.1	KEGG: slt:Slit_0555 flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter
YP_003846825.1	KEGG: slt:Slit_0556 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein
YP_003846826.1	TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: slt:Slit_0557 flagellar biosynthetic protein FlhF; SMART: AAA ATPase
YP_003846827.1	KEGG: slt:Slit_0558 putative MinD-related protein
YP_003846828.1	KEGG: slt:Slit_0559 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein
YP_003846829.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: slt:Slit_0560 MotA/TolQ/ExbB proton channel
YP_003846830.1	PFAM: OmpA/MotB domain protein; KEGG: slt:Slit_0561 OmpA/MotB domain protein
YP_003846831.1	PFAM: FlgN family protein; KEGG: slt:Slit_0562 FlgN family protein
YP_003846832.1	KEGG: slt:Slit_0563 anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein
YP_003846833.1	PFAM: Pyridoxal-dependent decarboxylase; KEGG: rpc:RPC_4871 pyridoxal-dependent decarboxylase
YP_003846834.1	KEGG: slt:Slit_1038 hypothetical protein
YP_003846835.1	KEGG: smd:Smed_6471 hypothetical protein
YP_003846836.1	KEGG: slt:Slit_0564 flagella basal body P-ring formation protein FlgA; TIGRFAM: flagella basal body P-ring formation protein FlgA; SMART: SAF domain protein
YP_003846837.1	KEGG: slt:Slit_0565 flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein
YP_003846838.1	KEGG: flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_003846839.1	PFAM: flagellar hook capping protein; KEGG: slt:Slit_0567 flagellar hook capping protein
YP_003846840.1	KEGG: fagellar hook-basal body protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_003846841.1	KEGG: slt:Slit_0569 flagellar basal-body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_003846842.1	KEGG: slt:Slit_0570 flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_003846843.1	PFAM: flagellar L-ring protein; KEGG: slt:Slit_0571 flagellar L-ring protein
YP_003846844.1	PFAM: flagellar P-ring protein; KEGG: slt:Slit_0572 flagellar P-ring protein
YP_003846845.1	KEGG: slt:Slit_0573 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like
YP_003846846.1	KEGG: slt:Slit_0574 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_003846847.1	KEGG: slt:Slit_0575 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein
YP_003846848.1	KEGG: dac:Daci_0091 septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC
YP_003846849.1	TIGRFAM: septum site-determining protein MinD; KEGG: cvi:CV_3376 septum site-determining protein MinD
YP_003846850.1	KEGG: aav:Aave_0126 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE
YP_003846851.1	KEGG: neu:NE0459 hypothetical protein; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein
YP_003846852.1	KEGG: app:CAP2UW1_3811 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3
YP_003846853.1	KEGG: slt:Slit_0588 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein
YP_003846854.1	TIGRFAM: flagellar biosynthetic protein FliO; KEGG: slt:Slit_0589 flagellar biosynthetic protein FliO
YP_003846855.1	KEGG: flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein
YP_003846856.1	KEGG: slt:Slit_0591 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein
YP_003846857.1	PFAM: flagellar basal body-associated protein FliL; KEGG: slt:Slit_0592 flagellar basal body-associated protein FliL
YP_003846858.1	PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: slt:Slit_0593 flagellar hook-length control protein
YP_003846859.1	KEGG: slt:Slit_0594 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein
YP_003846860.1	TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: slt:Slit_0595 flagellar protein export ATPase FliI; SMART: AAA ATPase
YP_003846861.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: slt:Slit_0596 flagellar assembly protein FliH/type III secretion system HrpE
YP_003846862.1	KEGG: slt:Slit_0597 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG
YP_003846863.1	KEGG: slt:Slit_0598 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein
YP_003846864.1	KEGG: slt:Slit_0599 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE
YP_003846865.1	PFAM: Methyltransferase type 11; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: nmu:Nmul_A0911 tetratricopeptide TPR_4
YP_003846866.1	PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: slt:Slit_0613 YcgR family protein
YP_003846867.1	PFAM: type III secretion exporter; KEGG: slt:Slit_0614 type III secretion exporter
YP_003846868.1	PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: slt:Slit_0615 hypothetical protein
YP_003846869.1	PFAM: flagellar export chaperone; KEGG: har:HEAR1870 putative flagellar synthesis (flagellar regulon)
YP_003846870.1	KEGG: slt:Slit_0617 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS
YP_003846871.1	PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: slt:Slit_0618 flagellar hook-associated 2 domain protein
YP_003846872.1	PFAM: flagellar protein FlaG protein; KEGG: slt:Slit_0619 flagellar protein FlaG protein
YP_003846873.1	PFAM: flagellin domain protein; KEGG: slt:Slit_0620 flagellin domain protein
YP_003846874.1	PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: tetratricopeptide TPR_2 repeat protein
YP_003846875.1	PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: tetratricopeptide TPR_2 repeat protein
YP_003846876.1	PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: slt:Slit_0612 TPR repeat-containing protein
YP_003846877.1	KEGG: slt:Slit_0612 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat
YP_003846878.1	PFAM: Transketolase domain-containing protein; KEGG: mag:amb0066 putative transketolase N-terminal section
YP_003846879.1	KEGG: hypothetical protein; PFAM: Transketolase central region; Transketolase domain-containing protein; SMART: Transketolase central region
YP_003846880.1	PFAM: Radical SAM domain protein; KEGG: mgm:Mmc1_1057 radical SAM domain-containing protein
YP_003846881.1	PFAM: Methyltransferase type 11; KEGG: SAM-dependent methyltransferase
YP_003846882.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: cbs:COXBURSA331_A0799 NAD-dependent epimerase/dehydratase family protein
YP_003846883.1	KEGG: bbt:BBta_5655 putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase
YP_003846884.1	KEGG: bja:blr5433 hypothetical protein
YP_003846885.1	PFAM: C-methyltransferase; Methyltransferase type 11; Methyltransferase domain protein; KEGG: mag:amb0140 SAM-dependent methyltransferase
YP_003846886.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO5178 putative short-chain dehydrogenase/reductase family protein
YP_003846887.1	PFAM: Methyltransferase type 11; KEGG: mgm:Mmc1_3045 methyltransferase type 12
YP_003846888.1	PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dsa:Desal_0553 dTDP-4-dehydrorhamnose reductase
YP_003846889.1	KEGG: gbm:Gbem_3387 Radical SAM domain protein; PFAM: cobalamin B12-binding domain protein; Ribulose bisphosphate carboxylase, large subunit-like; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003846890.1	PFAM: Radical SAM domain protein; KEGG: geo:Geob_0670 radical SAM domain protein
YP_003846891.1	PFAM: glycosyl transferase family 9; KEGG: glo:Glov_3383 glycosyl transferase family 9
YP_003846892.1	PFAM: Radical SAM domain protein; KEGG: mgm:Mmc1_1064 radical SAM domain-containing protein
YP_003846893.1	KEGG: tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat
YP_003846894.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: slt:Slit_0621 diguanylate cyclase; SMART: GGDEF domain containing protein
YP_003846895.1	KEGG: slt:Slit_0622 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_003846896.1	PFAM: Serine/threonine-protein kinase-like domain; KEGG: acr:Acry_2098 protein kinase
YP_003846897.1	manually curated; PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: app:CAP2UW1_3892 adenylate/guanylate cyclase; SMART: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase
YP_003846898.1	manually curated; KEGG: bpt:Bpet0225 hypothetical protein
YP_003846899.1	PFAM: OmpA/MotB domain protein; KEGG: pna:Pnap_4266 hypothetical protein
YP_003846900.1	KEGG: pna:Pnap_4265 hypothetical protein
YP_003846901.1	KEGG: slt:Slit_0623 PAS/PAC sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein
YP_003846902.1	TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; KEGG: mei:Msip34_0717 threonyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase SAD
YP_003846903.1	KEGG: slt:Slit_1736 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like
YP_003846904.1	KEGG: slt:Slit_1735 ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35
YP_003846905.1	KEGG: cvi:CV_1351 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20
YP_003846906.1	KEGG: slt:Slit_1733 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein
YP_003846907.1	TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: slt:Slit_1731 phenylalanyl-tRNA synthetase, beta subunit
YP_003846908.1	TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: slt:Slit_1730 integration host factor, alpha subunit; SMART: histone family protein DNA-binding protein
YP_003846909.1	KEGG: bpr:GBP346_A1764 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR
YP_003846910.1	KEGG: slt:Slit_0324 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE
YP_003846911.1	TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: slt:Slit_0325 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_003846912.1	KEGG: mei:Msip34_0985 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_003846913.1	KEGG: slt:Slit_0327 radical SAM domain-containing protein
YP_003846914.1	PFAM: Protein of unknown function DUF3025; KEGG: slt:Slit_1433 putative transmembrane protein
YP_003846915.1	KEGG: pol:Bpro_2733 hypothetical protein
YP_003846916.1	TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; PAS fold-4 domain protein; KEGG: slt:Slit_1184 diguanylate phosphodiesterase; SMART: EAL domain protein; PAS domain containing protein; PAC repeat-containing protein
YP_003846917.1	PFAM: protein of unknown function DUF107; KEGG: slt:Slit_1574 protein of unknown function DUF107
YP_003846918.1	KEGG: slt:Slit_1573 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein
YP_003846919.1	KEGG: slt:Slit_2774 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease
YP_003846920.1	PFAM: UvrD/REP helicase; KEGG: slt:Slit_1520 UvrD/REP helicase
YP_003846921.1	PFAM: protein of unknown function DUF455; KEGG: mms:mma_1274 hypothetical protein
YP_003846922.1	PFAM: Carbohydrate-selective porin OprB; KEGG: dar:Daro_3545 OmpA-like transmembrane domain-containing protein
YP_003846923.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; PAS fold-4 domain protein; CBS domain containing protein; GGDEF domain containing protein; GAF domain protein; KEGG: har:HEAR1331 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; CBS domain containing protein; GAF domain protein
YP_003846924.1	KEGG: tva:TVAG_413070 hypothetical protein
YP_003846925.1	SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: slt:Slit_1663 UTP-GlnB uridylyltransferase, GlnD; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain
YP_003846926.1	manually curated; TIGRFAM: methionine aminopeptidase, type I; KEGG: slt:Slit_1662 methionine aminopeptidase, type I; PFAM: peptidase M24
YP_003846927.1	KEGG: cvi:CV_0272 hypothetical protein
YP_003846928.1	SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: slt:Slit_2068 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_003846929.1	TIGRFAM: phosphoserine aminotransferase; KEGG: slt:Slit_2067 phosphoserine aminotransferase; PFAM: aminotransferase class V
YP_003846930.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: slt:Slit_2066 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
YP_003846931.1	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase, type II; KEGG: slt:Slit_2065 chorismate mutase; SMART: Chorismate mutase
YP_003846932.1	PFAM: transposase IS4 family protein; KEGG: app:CAP2UW1_3182 transposase IS4 family protein
YP_003846933.1	KEGG: slt:Slit_2064 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II
YP_003846934.1	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: slt:Slit_2063 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_003846935.1	KEGG: pol:Bpro_3613 putative transmembrane protein
YP_003846936.1	KEGG: slt:Slit_2062 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase
YP_003846937.1	KEGG: slt:Slit_2061 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; cytidylate kinase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); cytidylate kinase region
YP_003846938.1	KEGG: slt:Slit_2060 ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein
YP_003846939.1	TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: slt:Slit_2059 integration host factor, beta subunit; SMART: histone family protein DNA-binding protein
YP_003846940.1	KEGG: slt:Slit_2058 hypothetical protein
YP_003846941.1	KEGG: slt:Slit_2057 tetratricopeptide TPR_2 repeat protein
YP_003846942.1	TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: slt:Slit_2056 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase
YP_003846943.1	KEGG: slt:Slit_2055 RfaE bifunctional protein; TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein
YP_003846944.1	KEGG: slt:Slit_2054 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_003846945.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; PAS fold-4 domain protein; GGDEF domain containing protein; KEGG: slt:Slit_2321 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003846946.1	KEGG: slt:Slit_2036 general substrate transporter
YP_003846947.1	PFAM: acriflavin resistance protein; KEGG: cvi:CV_3924 transmembrane drug efflux protein
YP_003846948.1	PFAM: Beta-ketoacyl synthase; KEGG: slt:Slit_0447 beta-ketoacyl synthase
YP_003846949.1	PFAM: phosphopantetheine-binding; KEGG: slt:Slit_0448 phosphopantetheine-binding protein
YP_003846950.1	KEGG: slt:Slit_0449 alpha/beta hydrolase fold protein
YP_003846951.1	KEGG: eba:ebA6193 hypothetical protein
YP_003846952.1	KEGG: slt:Slit_1974 hypothetical protein
YP_003846953.1	PFAM: outer membrane efflux protein; KEGG: slt:Slit_1973 outer membrane efflux protein
YP_003846954.1	PFAM: Protein of unknown function DUF3240; KEGG: slt:Slit_1972 hypothetical protein
YP_003846955.1	KEGG: slt:Slit_1971 heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_003846956.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: slt:Slit_1970 efflux transporter, RND family, MFP subunit
YP_003846957.1	PFAM: Nucleotidyl transferase; KEGG: azo:azo2231 putative mannose-1-phosphate guanylyltransferase
YP_003846958.1	TIGRFAM: nucleotide sugar dehydrogenase; KEGG: slt:Slit_1377 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation
YP_003846959.1	KEGG: gvi:gll3645 inositol monophosphatase family protein; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase
YP_003846960.1	TIGRFAM: adenylylsulfate kinase; KEGG: cyn:Cyan7425_3345 adenylyl-sulfate kinase; PFAM: adenylylsulfate kinase
YP_003846962.1	TIGRFAM: S-adenosylmethionine synthetase; KEGG: slt:Slit_0177 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase
YP_003846963.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; KEGG: dps:DP0517 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein
YP_003846964.1	KEGG: neu:NE1345 hypothetical protein; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB
YP_003846965.1	TIGRFAM: prevent-host-death family protein; KEGG: neu:NE1346 hypothetical protein
YP_003846966.1	PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_2086 DNA polymerase beta subunit
YP_003846967.1	KEGG: slt:Slit_1263 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region
YP_003846968.1	TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: slt:Slit_1265 DNA polymerase III, subunits gamma and tau; SMART: AAA ATPase
YP_003846969.1	PFAM: uncharacterized protein family UPF0133; KEGG: slt:Slit_1266 hypothetical protein
YP_003846970.1	TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain-containing protein; KEGG: slt:Slit_1267 recombination protein RecR; SMART: Toprim sub domain-containing protein
YP_003846971.1	KEGG: slt:Slit_1268 RNA-binding S4 domain protein; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003846972.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: slt:Slit_1269 putative adenylate/guanylate cyclase
YP_003846973.1	KEGG: slt:Slit_1271 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase
YP_003846974.1	KEGG: app:CAP2UW1_1541 hypothetical protein
YP_003846975.1	KEGG: slt:Slit_1273 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_003846976.1	KEGG: slt:Slit_1274 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein
YP_003846977.1	PFAM: Anti sigma-E protein RseA family protein; KEGG: slt:Slit_1275 anti sigma-E protein, RseA
YP_003846978.1	PFAM: MucB/RseB family protein; KEGG: slt:Slit_1276 sigma E regulatory protein, MucB/RseB
YP_003846979.1	PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: slt:Slit_1277 positive regulator of sigma E, RseC/MucC
YP_003846980.1	SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: slt:Slit_1278 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_003846981.1	TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; KEGG: slt:Slit_1279 GTP-binding protein LepA; SMART: elongation factor G domain-containing protein
YP_003846982.1	KEGG: slt:Slit_1280 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region
YP_003846983.1	KEGG: slt:Slit_1281 putative transmembrane protein
YP_003846984.1	SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: slt:Slit_1282 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein
YP_003846985.1	KEGG: slt:Slit_1283 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein
YP_003846986.1	KEGG: slt:Slit_1284 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO
YP_003846987.1	TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: slt:Slit_1285 pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ
YP_003846988.1	KEGG: slt:Slit_1286 holo-acyl-carrier-protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase
YP_003846989.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: slt:Slit_1287 glycoside hydrolase family 3 domain protein
YP_003846990.1	FtsZ-binding region protein; KEGG: slt:Slit_1291 ZipA FtsZ-binding region; PFAM: ZipA FtsZ-binding region protein; SMART: ZipA FtsZ-binding region protein
YP_003846991.1	SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: app:CAP2UW1_3629 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; NAD-dependent DNA ligase OB-fold
YP_003846992.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: dar:Daro_1735 UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase
YP_003846993.1	PFAM: phosphoribosyltransferase; KEGG: slt:Slit_1294 phosphoribosyltransferase
YP_003846994.1	KEGG: slt:Slit_1295 methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1
YP_003846995.1	TIGRFAM: peptide deformylase; KEGG: neu:NE1755 peptide deformylase; PFAM: formylmethionine deformylase
YP_003846996.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; Ion transport 2 domain protein; KEGG: slt:Slit_1297 TrkA-N domain protein
YP_003846997.1	KEGG: rcu:RCOM_2026190 hypothetical protein
YP_003846998.1	KEGG: dar:Daro_3634 hypothetical protein
YP_003846999.1	KEGG: psl:Psta_1841 hypothetical protein
YP_003847000.1	KEGG: cco:CCC13826_1065 DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein
YP_003847001.1	KEGG: slt:Slit_1305 aconitate hydratase 1; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein
YP_003847002.1	PFAM: K potassium transporter; KEGG: dar:Daro_1184 K+ potassium transporter
YP_003847003.1	KEGG: pcs:Pc20g12430 Pc20g12430
YP_003847004.1	KEGG: alv:Alvin_2437 hypothetical protein
YP_003847005.1	KEGG: alv:Alvin_2436 hypothetical protein
YP_003847006.1	KEGG: alv:Alvin_2435 hypothetical protein
YP_003847007.1	PFAM: Protein of unknown function DUF3375; KEGG: alv:Alvin_2434 hypothetical protein
YP_003847008.1	KEGG: neu:NE2519 hypothetical protein
YP_003847009.1	PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: mea:Mex_p20010 hypothetical protein
YP_003847010.1	manually curated; KEGG: vei:Veis_3006 N-6 DNA methylase; PFAM: N-6 DNA methylase
YP_003847011.1	PFAM: restriction modification system DNA specificity domain; KEGG: mmb:Mmol_0228 restriction modification system DNA specificity domain protein
YP_003847012.1	KEGG: vei:Veis_3130 hypothetical protein
YP_003847013.1	TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: Protein of unknown function DUF3387; type III restriction protein res subunit; protein of unknown function DUF450; KEGG: bte:BTH_I2740 type I restriction-modification system endonuclease; SMART: DEAD-like helicase
YP_003847014.1	SMART: TIR protein; KEGG: sat:SYN_00503 putative cytoplasmic protein
YP_003847015.1	PFAM: Domain of unknown function DUF1863; KEGG: pol:Bpro_4743 hypothetical protein
YP_003847016.1	KEGG: mmq:MmarC5_1164 hypothetical protein
YP_003847017.1	PFAM: TIR protein; KEGG: mca:MCA3012 hypothetical protein
YP_003847018.1	KEGG: rfr:Rfer_1058 hypothetical protein
YP_003847019.1	KEGG: afr:AFE_3196 Tn5468, transposition protein D
YP_003847020.1	KEGG: afr:AFE_3197 Tn5468, transposition protein C
YP_003847021.1	PFAM: Integrase catalytic region; KEGG: afr:AFE_1202 Tn5468, transposase protein B
YP_003847022.1	PFAM: TnsA endonuclease; KEGG: afr:AFE_3199 Tn5468, transposase protein A
YP_003847023.1	KEGG: mcc:707892 laminin, gamma 1 (formerly LAMB2)
YP_003847024.1	KEGG: dps:DP1084 rod shape-determining protein (RodA)
YP_003847025.1	KEGG: slt:Slit_2188 methyltransferase type 11
YP_003847026.1	PFAM: transposase mutator type; KEGG: dia:Dtpsy_3336 transposase mutator type
YP_003847027.1	PFAM: Domain of unknown function DUF1863; KEGG: ajs:Ajs_2218 TPR repeat-containing protein
YP_003847028.1	KEGG: slt:Slit_1345 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_003847029.1	KEGG: aeh:Mlg_0606 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase
YP_003847030.1	PFAM: phosphofructokinase; KEGG: mgm:Mmc1_1917 6-phosphofructokinase
YP_003847031.1	KEGG: slt:Slit_1760 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_003847032.1	KEGG: slt:Slit_1758 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein
YP_003847033.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: slt:Slit_1757 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein
YP_003847034.1	KEGG: slt:Slit_1756 hypothetical protein
YP_003847035.1	KEGG: eba:ebA2196 hypothetical protein
YP_003847036.1	PFAM: Spermine synthase; KEGG: eba:ebA4197 putative transferase
YP_003847037.1	KEGG: slt:Slit_1242 putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_003847038.1	SMART: GGDEF domain containing protein; CBS domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: mfa:Mfla_2422 diguanylate cyclase/phosphodiesterase; PFAM: GGDEF domain containing protein; CBS domain containing protein
YP_003847040.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eba:ebA5593 haloacid dehalogenase-like hydrolase
YP_003847041.1	KEGG: slt:Slit_1420 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core
YP_003847042.1	KEGG: slt:Slit_1421 GTP-binding protein HflX; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related
YP_003847043.1	TIGRFAM: HflK protein; PFAM: band 7 protein; Protein HflK-like; KEGG: slt:Slit_1422 HflK protein; SMART: band 7 protein
YP_003847044.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: slt:Slit_1423 HflC protein; SMART: band 7 protein
YP_003847045.1	TIGRFAM: histidyl-tRNA synthetase 2; KEGG: slt:Slit_1425 histidyl-tRNA synthetase 2
YP_003847046.1	SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: slt:Slit_1426 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase
YP_003847047.1	SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: slt:Slit_1427 ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain
YP_003847048.1	manually curated; TIGRFAM: RNA methyltransferase, TrmH family, group 3; KEGG: slt:Slit_1428 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding
YP_003847049.1	PFAM: OmpA/MotB domain protein; KEGG: vpa:VP0764 outer membrane protein OmpA
YP_003847050.1	KEGG: slt:Slit_1654 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_003847051.1	KEGG: slt:Slit_1480 protein of unknown function DUF150; manually curated; PFAM: protein of unknown function DUF150
YP_003847052.1	KEGG: slt:Slit_1481 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein
YP_003847053.1	KEGG: slt:Slit_1482 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; Initiation factor 2 associated domain protein ; elongation factor Tu domain 2 protein
YP_003847054.1	KEGG: slt:Slit_1483 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A
YP_003847055.1	KEGG: slt:Slit_1484 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B
YP_003847056.1	KEGG: slt:Slit_1485 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15
YP_003847057.1	SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: slt:Slit_1486 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein
YP_003847058.1	PFAM: polysaccharide export protein; protein of unknown function DUF1017; Soluble ligand binding domain; KEGG: aba:Acid345_2732 polysaccharide export protein
YP_003847059.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: plt:Plut_1888 hypothetical protein
YP_003847060.1	PFAM: Protein of unknown function DUF2442; KEGG: cch:Cag_1569 hypothetical protein
YP_003847061.1	TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: pol:Bpro_4942 mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase
YP_003847062.1	PFAM: DNA polymerase beta domain protein region; KEGG: lch:Lcho_2332 DNA polymerase beta subunit
YP_003847063.1	PFAM: protein of unknown function DUF86; KEGG: pph:Ppha_1588 protein of unknown function DUF86
YP_003847064.1	KEGG: gem:GM21_2604 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_003847065.1	KEGG: pha:PSHAa0448 hypothetical protein
YP_003847066.1	KEGG: sfu:Sfum_3361 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_003847067.1	PFAM: polysaccharide biosynthesis protein; KEGG: afw:Anae109_1814 polysaccharide biosynthesis protein
YP_003847068.1	KEGG: dae:Dtox_2835 hypothetical protein
YP_003847069.1	TIGRFAM: methyltransferase FkbM family; KEGG: gsu:GSU1506 hypothetical protein
YP_003847070.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: gur:Gura_3801 NAD-dependent epimerase/dehydratase
YP_003847071.1	PFAM: glycosyl transferase group 1; KEGG: dol:Dole_0528 glycosyl transferase group 1
YP_003847072.1	KEGG: eli:ELI_12240 hypothetical protein
YP_003847073.1	PFAM: glycosyl transferase family 2; KEGG: tgr:Tgr7_2099 glycosyl transferase, family 2
YP_003847074.1	PFAM: glycosyl transferase group 1; KEGG: cyn:Cyan7425_2186 glycosyl transferase group 1
YP_003847075.1	KEGG: gur:Gura_1687 FkbM family methyltransferase; TIGRFAM: methyltransferase FkbM family; PFAM: protein of unknown function Met10
YP_003847076.1	PFAM: sulfotransferase; KEGG: nhl:Nhal_3318 sulfotransferase
YP_003847077.1	PFAM: glycosyl transferase group 1; KEGG: pna:Pnap_3183 glycosyl transferase, group 1
YP_003847078.1	PFAM: acyltransferase 3; KEGG: abo:ABO_0912 acetyltransferase, putative
YP_003847079.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: pna:Pnap_3182 putative acetyltransferase
YP_003847080.1	PFAM: Methyltransferase type 11; KEGG: cyc:PCC7424_5793 methyltransferase type 11
YP_003847081.1	PFAM: glycosyl transferase family 2; KEGG: pna:Pnap_3181 glycosyl transferase family protein
YP_003847082.1	PFAM: glycosyl transferase group 1; KEGG: pna:Pnap_3178 putative glycosyl transferase
YP_003847083.1	KEGG: vex:VEA_001326 capsular polysaccharide synthesis enzyme CpsA sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_003847084.1	KEGG: svo:SVI_3508 hypothetical protein
YP_003847085.1	KEGG: vap:Vapar_1198 lipoprotein
YP_003847086.1	KEGG: tmz:Tmz1t_3793 protein of unknown function DUF940 membrane lipoprotein putative; PFAM: protein of unknown function DUF940 membrane lipoprotein; protein of unknown function DUF1017; phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related
YP_003847087.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: scl:sce1267 hypothetical protein
YP_003847088.1	KEGG: cja:CJA_0883 hypothetical protein
YP_003847089.1	PFAM: diacylglycerol kinase; KEGG: slt:Slit_2466 diacylglycerol kinase
YP_003847090.1	KEGG: dac:Daci_1244 putative transcriptional regulator
YP_003847091.1	KEGG: pna:Pnap_0084 hypothetical protein; TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891
YP_003847093.1	TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: slt:Slit_2070 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_003847094.1	TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: slt:Slit_2069 ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11
YP_003847095.1	PFAM: beta-lactamase; KEGG: rcu:RCOM_2085760 d-aminoacylase, putative
YP_003847096.1	KEGG: kva:Kvar_1665 extracellular solute-binding protein family 3
YP_003847097.1	PFAM: extracellular solute-binding protein family 3; KEGG: shn:Shewana3_1085 hypothetical protein
YP_003847098.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: sus:Acid_4777 histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_003847099.1	KEGG: slt:Slit_1659 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_003847100.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sus:Acid_4777 histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_003847101.1	KEGG: slt:Slit_2243 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_003847102.1	PFAM: Patatin; KEGG: rfr:Rfer_0361 patatin
YP_003847103.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: slt:Slit_1460 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_003847104.1	KEGG: dar:Daro_0728 histidine kinase, HAMP region: chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003847105.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: slt:Slit_0663 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; Hpt domain protein
YP_003847106.1	TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_003847107.1	PFAM: major facilitator superfamily MFS_1; KEGG: slt:Slit_1381 major facilitator superfamily MFS_1
YP_003847108.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: slt:Slit_1383 DNA mismatch repair protein MutL; SMART: MutL dimerisation; ATP-binding region ATPase domain protein
YP_003847109.1	KEGG: rfr:Rfer_3754 NAD(P) transhydrogenase subunit alpha; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: alanine dehydrogenase/PNT domain protein
YP_003847110.1	KEGG: app:CAP2UW1_4180 NAD(P)(+) transhydrogenase (AB-specific); PFAM: NAD(P) transhydrogenase beta subunit
YP_003847111.1	KEGG: dar:Daro_3676 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase
YP_003847112.1	PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; KEGG: slt:Slit_2781 DNA topoisomerase IV, B subunit; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein
YP_003847113.1	SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: slt:Slit_2782 DNA topoisomerase IV, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_003847114.1	PFAM: protein of unknown function DUF195; KEGG: azo:azo2787 putative RumC-like protein
YP_003847115.1	TIGRFAM: glucokinase; KEGG: slt:Slit_0981 glucokinase; PFAM: Glucokinase
YP_003847116.1	KEGG: mei:Msip34_1758 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_003847117.1	TIGRFAM: alpha-glucan phosphorylase; KEGG: nmu:Nmul_A0715 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_003847118.1	KEGG: net:Neut_0608 glycogen/starch synthases, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1
YP_003847119.1	PFAM: Spermine synthase; KEGG: psa:PST_3134 spermidine synthase
YP_003847120.1	KEGG: slt:Slit_1842 malate dehydrogenase; TIGRFAM: malate dehydrogenase; PFAM: Lactate/malate dehydrogenase
YP_003847121.1	KEGG: slt:Slit_1841 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit
YP_003847122.1	KEGG: slt:Slit_1840 succinate dehydrogenase, hydrophobic membrane anchor protein; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit
YP_003847123.1	KEGG: slt:Slit_1839 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_003847124.1	KEGG: slt:Slit_1838 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_003847125.1	PFAM: protein of unknown function DUF339; KEGG: slt:Slit_1837 protein of unknown function DUF339
YP_003847126.1	TIGRFAM: citrate synthase I; KEGG: slt:Slit_1836 citrate synthase I; PFAM: Citrate synthase
YP_003847127.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: slt:Slit_1835 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component
YP_003847128.1	KEGG: slt:Slit_1834 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein
YP_003847129.1	KEGG: slt:Slit_1833 quinone oxidoreductase, YhdH/YhfP family; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES domain protein
YP_003847130.1	TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: slt:Slit_1509 hydroxyacylglutathione hydrolase; SMART: beta-lactamase domain protein
YP_003847131.1	PFAM: Methyltransferase type 11; KEGG: slt:Slit_1510 methyltransferase type 11
YP_003847132.1	KEGG: slt:Slit_1511 ribonuclease H; PFAM: ribonuclease H
YP_003847133.1	SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: slt:Slit_1512 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III
YP_003847134.1	KEGG: slt:Slit_1513 alpha/beta hydrolase fold protein
YP_003847135.1	PFAM: HI0933 family protein; KEGG: slt:Slit_1514 HI0933 family protein
YP_003847136.1	KEGG: tmz:Tmz1t_0167 hypothetical protein
YP_003847137.1	KEGG: azo:azo1672 putative magnesium and cobalt transport protein; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein
YP_003847138.1	KEGG: zro:ZYRO0G01606g hypothetical protein
YP_003847139.1	KEGG: fma:FMG_0047 hypothetical protein
YP_003847140.1	PFAM: helix-turn-helix domain protein; Bacteriophage phi-Lf, Orf112; KEGG: neu:NE0896 helix-hairpin-helix DNA-binding motif-containing protein
YP_003847141.1	KEGG: amino acid adenylation enzyme/thioester reductase family protein
YP_003847142.1	KEGG: gur:Gura_1360 hypothetical protein
YP_003847143.1	KEGG: app:CAP2UW1_0533 hypothetical protein
YP_003847144.1	KEGG: hypothetical protein
YP_003847145.1	KEGG: dar:Daro_2265 heavy metal efflux pump CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_003847146.1	KEGG: slt:Slit_1864 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: Copper binding periplasmic protein CusF
YP_003847147.1	PFAM: outer membrane efflux protein; KEGG: slt:Slit_1863 outer membrane efflux protein
YP_003847148.1	KEGG: slt:Slit_1862 hypothetical protein
YP_003847149.1	TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; KEGG: lhk:LHK_02149 TypA; SMART: elongation factor G domain-containing protein
YP_003847150.1	PFAM: SirA-like domain-containing protein; KEGG: net:Neut_1003 hypothetical protein
YP_003847151.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: spe:Spro_0496 putative inner membrane protein
YP_003847153.1	KEGG: slt:Slit_2045 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein
YP_003847154.1	TIGRFAM: 4-alpha-glucanotransferase; KEGG: slt:Slit_1037 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77
YP_003847155.1	PFAM: glycoside hydrolase family 57; KEGG: nmu:Nmul_A0719 glycoside hydrolase family protein
YP_003847156.1	KEGG: mfa:Mfla_1368 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase
YP_003847157.1	KEGG: nmu:Nmul_A0717 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase all-beta; alpha amylase catalytic region
YP_003847158.1	KEGG: cts:Ctha_1613 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI)
YP_003847159.1	KEGG: tbd:Tbd_1190 ATP-binding ABC transporter protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003847160.1	KEGG: azo:azo3438 putative virulence regulator protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver
YP_003847161.1	KEGG: net:Neut_2046 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_003847162.1	PFAM: heat shock protein Hsp20; KEGG: afr:AFE_2086 heat shock protein, HSP20 family
YP_003847163.1	KEGG: gur:Gura_1503 hypothetical protein
YP_003847164.1	KEGG: slt:Slit_2826 putative PAS/PAC sensor protein
YP_003847165.1	KEGG: pmy:Pmen_4004 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_003847166.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: eba:c1A75 two-component sensor; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein
YP_003847167.1	TIGRFAM: PAS sensor protein; KEGG: mbn:Mboo_0328 putative PAS/PAC sensor protein
YP_003847168.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: pin:Ping_2550 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein
YP_003847169.1	PFAM: CheB methylesterase; MCP methyltransferase CheR-type; PAS fold domain protein; KEGG: mag:amb3654 hypothetical protein; SMART: MCP methyltransferase CheR-type; PAS domain containing protein
YP_003847170.1	PFAM: histone deacetylase superfamily; KEGG: slt:Slit_1540 histone deacetylase
YP_003847171.1	KEGG: slt:Slit_1541 CoA-binding domain protein; PFAM: CoA-binding domain protein; ATP-grasp domain protein; GCN5-related N-acetyltransferase; SMART: CoA-binding domain protein
YP_003847172.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: slt:Slit_1351 transcriptional regulator, LysR family
YP_003847173.1	PFAM: Pirin domain protein; KEGG: slt:Slit_1350 pirin domain protein
YP_003847174.1	PFAM: Cytochrome b/b6 domain; KEGG: slt:Slit_2051 cytochrome b561
YP_003847175.1	KEGG: slt:Slit_1349 YceI family protein; PFAM: YceI family protein; SMART: YceI family protein
YP_003847176.1	KEGG: slt:Slit_1348 YceI family protein; PFAM: YceI family protein; SMART: YceI family protein
YP_003847177.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: slt:Slit_1347 NADH:flavin oxidoreductase/NADH oxidase
YP_003847178.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: mmb:Mmol_1784 phosphomannomutase
YP_003847179.1	KEGG: dar:Daro_0085 hypothetical protein
YP_003847180.1	TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: slt:Slit_1418 ribosome-associated GTPase EngA; SMART: AAA ATPase
YP_003847181.1	TIGRFAM: outer membrane assembly lipoprotein YfgL; KEGG: slt:Slit_1417 outer membrane assembly lipoprotein YfgL
YP_003847182.1	PFAM: Protein of unknown function DUF2133; KEGG: slt:Slit_1416 protein of unknown function DUF2133
YP_003847183.1	TIGRFAM: histidyl-tRNA synthetase; KEGG: slt:Slit_1415 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein
YP_003847184.1	KEGG: slt:Slit_1414 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein
YP_003847185.1	KEGG: neu:NE0147 hypothetical protein
YP_003847186.1	KEGG: slt:Slit_1412 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_1 repeat-containing protein
YP_003847187.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: slt:Slit_1411 radical SAM enzyme, Cfr family; SMART: Elongator protein 3/MiaB/NifB
YP_003847188.1	PFAM: nucleoside diphosphate kinase; KEGG: mms:mma_2131 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase
YP_003847189.1	KEGG: cch:Cag_1938 Sel1 repeat-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein
YP_003847190.1	KEGG: slt:Slit_1406 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; tRNA(Ile)-lysidine synthetase domain protein
YP_003847191.1	KEGG: slt:Slit_1405 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region
YP_003847192.1	KEGG: slt:Slit_1404 cyclic nucleotide-regulated small mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_003847193.1	KEGG: slt:Slit_1403 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
YP_003847194.1	KEGG: slt:Slit_1159 hypothetical protein
YP_003847196.1	KEGG: slt:Slit_2518 endonuclease/exonuclease/phosphatase
YP_003847197.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: slt:Slit_1040 transcriptional coactivator/pterin dehydratase
YP_003847198.1	KEGG: geo:Geob_3314 protein of unknown function DUF1540
YP_003847200.1	KEGG: hch:HCH_03207 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase
YP_003847201.1	SMART: DEAD-like helicase; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; KEGG: wsu:WS1129 hypothetical protein; PFAM: protein of unknown function DUF450; type III restriction protein res subunit
YP_003847202.1	PFAM: restriction modification system DNA specificity domain; KEGG: mfa:Mfla_1216 restriction modification system DNA specificity subunit
YP_003847203.1	KEGG: chu:CHU_3353 virulence protein
YP_003847204.1	TIGRFAM: type I restriction-modification system, M subunit; KEGG: wsu:WS1136 type I site-specific deoxyribonuclease; PFAM: N-6 DNA methylase
YP_003847205.1	KEGG: slt:Slit_2790 addiction module antidote protein; TIGRFAM: addiction module antidote protein; PFAM: helix-turn-helix domain protein
YP_003847206.1	KEGG: slt:Slit_2789 addiction module killer protein; TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891
YP_003847207.1	KEGG: psa:PST_3347 ISxac2 transposase
YP_003847208.1	KEGG: ava:Ava_B0335 transcription regulator
YP_003847209.1	PFAM: plasmid stabilization system; KEGG: hde:HDEF_1121 addiction module
YP_003847210.1	KEGG: csa:Csal_0740 hypothetical protein
YP_003847211.1	KEGG: app:CAP2UW1_1198 NTPase (NACHT family)-like protein
YP_003847212.1	KEGG: cim:CIMG_04089 hypothetical protein
YP_003847213.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mrd:Mrad2831_6131 integrase family protein
YP_003847214.1	KEGG: ava:Ava_3729 TPR-related region
YP_003847215.1	PFAM: D-alanine--D-alanine ligase domain protein; KEGG: det:DET0629 D-ala D-ala ligase
YP_003847216.1	PFAM: Domain of unknown function DUF1863; KEGG: sun:SUN_2116 hypothetical protein
YP_003847217.1	TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; UvrD/REP helicase; KEGG: pau:PA14_28810 putative DNA helicase; SMART: helicase domain protein; DEAD-like helicase
YP_003847218.1	KEGG: app:CAP2UW1_1494 type I secretion membrane fusion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein
YP_003847219.1	KEGG: slt:Slit_2913 type I secretion outer membrane protein, TolC family; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein
YP_003847220.1	KEGG: gur:Gura_2547 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_003847221.1	PFAM: Hemolysin-type calcium-binding region; KEGG: nmi:NMO_1247 FrpA/C-related protein
YP_003847222.1	KEGG: cal:CaO19.9228 oligosaccharyl transferase
YP_003847224.1	KEGG: pfo:Pfl01_2700 formate dehydrogenase gamma subunit
YP_003847225.1	KEGG: cme:CMP065C DNA excision repair protein ERCC2/XPD
YP_003847226.1	TIGRFAM: outer membrane adhesin like proteiin; PFAM: Ig family protein; Hemolysin-type calcium-binding region; KEGG: ppd:Ppro_2370 Ig family protein; SMART: Dystroglycan-type cadherin domain protein
YP_003847227.1	KEGG: mjl:Mjls_0954 hypothetical protein
YP_003847228.1	KEGG: npu:Npun_F4679 hemolysin-type calcium-binding region
YP_003847229.1	KEGG: hypothetical protein
YP_003847230.1	KEGG: pol:Bpro_1019 hypothetical protein
YP_003847231.1	PFAM: RTX toxin-activating protein C; KEGG: pol:Bpro_1023 RTX toxin-activating protein C
YP_003847232.1	KEGG: bxe:Bxe_B0610 LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR
YP_003847233.1	KEGG: bpy:Bphyt_4276 hypothetical protein
YP_003847234.1	KEGG: bph:Bphy_4437 autoinducer synthesis protein; PFAM: autoinducer synthesis protein
YP_003847235.1	KEGG: pde:Pden_2312 excinuclease ABC subunit C
YP_003847236.1	PFAM: restriction endonuclease; DNA topoisomerase type IA zn finger domain protein; KEGG: eba:ebA6362 putative endonuclease
YP_003847237.1	KEGG: pph:Ppha_0192 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2442
YP_003847238.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: geo:Geob_2723 XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein
YP_003847239.1	PFAM: plasmid maintenance system killer; KEGG: dac:Daci_1212 plasmid maintenance system killer
YP_003847240.1	KEGG: eba:p1B240 hypothetical protein
YP_003847241.1	KEGG: rpf:Rpic12D_5209 hypothetical protein
YP_003847242.1	KEGG: tgr:Tgr7_1799 hypothetical protein
YP_003847243.1	KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein
YP_003847244.1	KEGG: ctt:CtCNB1_2118 transporter, hydrophobe/amphiphile efflux-1
YP_003847245.1	KEGG: hypothetical protein
YP_003847246.1	KEGG: dar:Daro_2567 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_003847247.1	KEGG: psp:PSPPH_3288 periplasmic lipoprotein
YP_003847248.1	PFAM: integrase family protein; KEGG: hypothetical protein
YP_003847249.1	KEGG: tca:660041 similar to cabut
YP_003847250.1	KEGG: mva:Mvan_1255 hypothetical protein
YP_003847251.1	KEGG: metal dependent phosphohydrolase
YP_003847252.1	KEGG: pmr:PMI2437 plasmid-related protein
YP_003847253.1	KEGG: dpe:Dper_GL26996 GL26996 gene product from transcript GL26996-RA
YP_003847254.1	KEGG: tentative decarboxylase
YP_003847255.1	TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: bpy:Bphyt_3000 integration host factor subunit beta; SMART: histone family protein DNA-binding protein
YP_003847256.1	KEGG: pfh:PFHG_02325 conserved hypothetical protein
YP_003847257.1	PFAM: protein of unknown function DUF1778; KEGG: bvi:Bcep1808_6120 hypothetical protein
YP_003847260.1	KEGG: tbd:Tbd_1587 sensor protein
YP_003847261.1	KEGG: app:CAP2UW1_0235 hypothetical protein
YP_003847262.1	KEGG: app:CAP2UW1_1395 hypothetical protein; manually curated; SMART: AAA ATPase
YP_003847263.1	KEGG: gvi:gll1140 ExbD/TolR family protein
YP_003847264.1	PFAM: TOPRIM domain-containing protein; DNA topoisomerase type IA central domain protein; KEGG: eca:ECA0525 DNA topoisomerase III; SMART: DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; DNA topoisomerase I DNA-binding
YP_003847265.1	KEGG: bhy:BHWA1_01743 ATP-dependent nuclease subunit B
YP_003847266.1	KEGG: mei:Msip34_1569 hypothetical protein
YP_003847267.1	PFAM: DSBA oxidoreductase; KEGG: vap:Vapar_1753 hypothetical protein
YP_003847268.1	PFAM: nitroreductase; KEGG: bbr:BB3252 hypothetical protein
YP_003847269.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: hch:HCH_01283 transcriptional regulator
YP_003847270.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pmy:Pmen_1510 LysR family transcriptional regulator
YP_003847271.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: dze:Dd1591_0940 NADP oxidoreductase coenzyme F420-dependent
YP_003847272.1	PFAM: Cytochrome b/b6 domain; KEGG: slt:Slit_2051 cytochrome b561
YP_003847273.1	KEGG: slt:Slit_1349 YceI family protein; PFAM: YceI family protein; SMART: YceI family protein
YP_003847274.1	KEGG: slt:Slit_1348 YceI family protein; PFAM: YceI family protein; SMART: YceI family protein
YP_003847275.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: slt:Slit_1347 NADH:flavin oxidoreductase/NADH oxidase
YP_003847276.1	KEGG: mar:MAE_54290 hypothetical protein
YP_003847277.1	KEGG: rru:Rru_A3590 hypothetical protein
YP_003847278.1	KEGG: dvi:Dvir_GJ16188 GJ16188 gene product from transcript GJ16188-RA
YP_003847279.1	SMART: TIR protein; KEGG: swd:Swoo_4630 TIR protein
YP_003847280.1	KEGG: tad:TRIADDRAFT_22099 hypothetical protein
YP_003847281.1	KEGG: sbp:Sbal223_2807 hypothetical protein
YP_003847282.1	KEGG: ana:alr1877 hypothetical protein
YP_003847283.1	KEGG: slt:Slit_0579 protein of unknown function DUF2252
YP_003847284.1	manually curated; PFAM: histone family protein DNA-binding protein; KEGG: slt:Slit_2045 histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein
YP_003847287.1	KEGG: bpr:GBP346_A1558 hypothetical protein
YP_003847288.1	KEGG: bpd:BURPS668_A0553 hypothetical protein
YP_003847289.1	PFAM: TIR protein; KEGG: mbu:Mbur_0481 hypothetical protein
YP_003847290.1	PFAM: integrase family protein; KEGG: integrase family protein
YP_003847291.1	KEGG: rrs:RoseRS_2064 hypothetical protein
YP_003847292.1	KEGG: avn:Avin_17420 hypothetical protein
YP_003847293.1	KEGG: avn:Avin_17430 hypothetical protein
YP_003847294.1	KEGG: rpf:Rpic12D_4770 hypothetical protein
YP_003847295.1	KEGG: app:CAP2UW1_3560 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_003847296.1	PFAM: Negative transcriptional regulator; KEGG: hau:Haur_4597 FMN-binding negative transcriptional regulator
YP_003847297.1	PFAM: transglutaminase domain-containing protein; KEGG: glo:Glov_0064 transglutaminase domain protein
YP_003847298.1	PFAM: aminotransferase class-III; KEGG: reu:Reut_A2723 acetylornithine transaminase protein
YP_003847299.1	KEGG: pti:PHATRDRAFT_48375 hypothetical protein
YP_003847300.1	KEGG: slo:Shew_0995 phage integrase family protein; manually curated; PFAM: integrase family protein
YP_003847301.1	PFAM: integrase family protein; KEGG: psp:PSPPH_0099 shufflon-specific recombinase
YP_003847302.1	PFAM: Antirestriction ArdA family protein; KEGG: hypothetical protein
YP_003847303.1	KEGG: hypothetical protein
YP_003847304.1	KEGG: mta:Moth_2243 hypothetical protein
YP_003847305.1	KEGG: hypothetical protein
YP_003847306.1	KEGG: app:CAP2UW1_2146 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_003847307.1	PFAM: HipA domain protein; KEGG: app:CAP2UW1_2145 HipA domain protein
YP_003847308.1	KEGG: hypothetical protein
YP_003847309.1	KEGG: sde:Sde_2753 hypothetical protein
YP_003847310.1	KEGG: putative ATP-dependent Lon protease
YP_003847311.1	KEGG: azl:AZL_017430 6-phosphofructokinase
YP_003847312.1	KEGG: cko:CKO_pCKO3p06143 hypothetical protein
YP_003847313.1	KEGG: yps:pYptb0029 TriK protein
YP_003847314.1	KEGG: hypothetical protein
YP_003847315.1	KEGG: kpe:KPK_1288 hypothetical protein
YP_003847316.1	KEGG: chy:CHY_0837 DNA repair protein RadA
YP_003847317.1	KEGG: smm:Smp_139720 zinc transporter
YP_003847318.1	KEGG: eba:ebA106 hypothetical protein
YP_003847319.1	KEGG: vfm:VFMJ11_0559 cytochrome c assembly protein
YP_003847320.1	KEGG: cyc:PCC7424_2370 hypothetical protein
YP_003847321.1	KEGG: cti:pRALTA_0662 putative ATPase; putative exported protein
YP_003847322.1	PFAM: protein of unknown function DUF262; KEGG: cti:pRALTA_0661 hypothetical protein
YP_003847323.1	TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: slt:Slit_1493 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003847324.1	SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; manually curated; TIGRFAM: excinuclease ABC, C subunit; KEGG: slt:Slit_1492 excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif
YP_003847325.1	KEGG: nmu:Nmul_A1560 hypothetical protein
YP_003847326.1	KEGG: cvi:CV_2345 hypothetical protein; manually curated; PFAM: protein of unknown function DUF519
YP_003847327.1	PFAM: PfkB domain protein; KEGG: amc:MADE_03203 sugar kinase, ribokinase family protein
YP_003847328.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; KEGG: mei:Msip34_1854 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein
YP_003847329.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mgm:Mmc1_2382 periplasmic binding protein/LacI transcriptional regulator
YP_003847330.1	PFAM: porin LamB type; KEGG: slt:Slit_1664 porin LamB type
YP_003847331.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: lhk:LHK_01031 sensor protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003847332.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pin:Ping_1110 transcriptional regulator, periplasmic binding protein of LacI family protein
YP_003847333.1	KEGG: slt:Slit_1530 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR
YP_003847334.1	KEGG: slt:Slit_1529 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase
YP_003847335.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: slt:Slit_1528 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_003847336.1	KEGG: slt:Slit_1527 fatty acid/phospholipid synthesis protein PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein
YP_003847337.1	KEGG: slt:Slit_1526 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein
YP_003847338.1	PFAM: protein of unknown function DUF177; KEGG: slt:Slit_1525 protein of unknown function DUF177
YP_003847339.1	KEGG: slt:Slit_1524 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein
YP_003847340.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dar:Daro_2010 uroporphyrin-III C/tetrapyrrole methyltransferase
YP_003847341.1	TIGRFAM: RNA polymerase-binding protein DksA; KEGG: slt:Slit_1523 transcriptional regulator, TraR/DksA family
YP_003847342.1	PFAM: protein of unknown function DUF52; KEGG: slt:Slit_1844 protein of unknown function DUF52
YP_003847343.1	PFAM: AMMECR1 domain protein; KEGG: slt:Slit_1845 AMMECR1 domain protein
YP_003847344.1	KEGG: slt:Slit_1846 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003847345.1	TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: slt:Slit_1881 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein
YP_003847346.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: azo:azo0906 putative signal transduction protein
YP_003847347.1	KEGG: slt:Slit_2154 putative ATP-dependent protease La, putative
YP_003847348.1	KEGG: cch:Cag_1938 Sel1 repeat-containing protein; PFAM: Sporulation domain-containing protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein
YP_003847349.1	KEGG: nmi:NMO_1621 TPR repeat protein; PFAM: Sporulation domain-containing protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein
YP_003847350.1	KEGG: slt:Slit_2419 hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_003847351.1	KEGG: slt:Slit_2421 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein
YP_003847352.1	KEGG: slt:Slit_2422 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC)
YP_003847353.1	KEGG: dar:Daro_1104 hypothetical protein
YP_003847354.1	PFAM: phosphofructokinase; KEGG: pfkA; 6-phosphofructokinase
YP_003847355.1	manually curated; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; KEGG: slt:Slit_2423 (NiFe) hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase
YP_003847356.1	KEGG: slt:Slit_2424 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K
YP_003847357.1	PFAM: Spore coat protein U; KEGG: aeh:Mlg_0777 spore coat U domain-containing protein
YP_003847358.1	KEGG: rso:RSc2693 putative outer membrane usher transmembrane protein; manually curated; PFAM: fimbrial biogenesis outer membrane usher protein
YP_003847359.1	PFAM: Pili assembly chaperone, N-terminal; KEGG: rso:RSc2694 putative pili assembly chaperone transmembrane protein
YP_003847360.1	PFAM: Spore coat protein U; KEGG: afr:AFE_0005 spore coat protein
YP_003847361.1	KEGG: slt:Slit_2425 hydrogenase nickel insertion protein HypA; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA
YP_003847362.1	KEGG: rlt:Rleg2_6538 HupE/UreJ protein
YP_003847363.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: slt:Slit_1608 respiratory-chain NADH dehydrogenase domain 51 kDa subunit
YP_003847364.1	PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; KEGG: dar:Daro_0980 ferredoxin
YP_003847365.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dar:Daro_0981 NADH ubiquinone oxidoreductase, 20 kDa subunit
YP_003847366.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: dar:Daro_0982 nickel-dependent hydrogenase, large subunit
YP_003847367.1	KEGG: dar:Daro_0983 HoxW protein
YP_003847368.1	KEGG: ddf:DEFDS_0831 hypothetical protein
YP_003847369.1	KEGG: slt:Slit_2796 YecA family protein; TIGRFAM: yecA family protein; PFAM: uncharacterized protein family UPF0149 (YgfB); SEC-C motif domain protein
YP_003847370.1	PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: TonB-dependent receptor
YP_003847371.1	KEGG: dwi:Dwil_GK10816 GK10816 gene product from transcript GK10816-RA
YP_003847372.1	KEGG: pyo:PY04960 hypothetical protein
YP_003847373.1	KEGG: dvi:Dvir_GJ10068 GJ10068 gene product from transcript GJ10068-RA
YP_003847374.1	KEGG: slt:Slit_1624 chromosome segregation and condensation protein, ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB
YP_003847375.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: slt:Slit_1625 chromosome segregation and condensation protein ScpA
YP_003847376.1	TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: slt:Slit_1626 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_003847377.1	PFAM: peptidase M50; KEGG: slt:Slit_1627 peptidase M50
YP_003847378.1	KEGG: slt:Slit_1629 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain
YP_003847379.1	KEGG: slt:Slit_1630 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein
YP_003847380.1	PFAM: protein of unknown function UPF0125; KEGG: slt:Slit_1631 protein of unknown function UPF0125
YP_003847381.1	PFAM: cyclase/dehydrase; KEGG: slt:Slit_1632 cyclase/dehydrase
YP_003847382.1	KEGG: slt:Slit_1633 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein
YP_003847383.1	TIGRFAM: peptide methionine sulfoxide reductase; KEGG: slt:Slit_1634 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A
YP_003847384.1	TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; KEGG: slt:Slit_1672 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain
YP_003847385.1	PFAM: HPP family protein; KEGG: tcx:Tcr_1929 HPP
YP_003847386.1	KEGG: cyanophycin synthetase; TIGRFAM: cyanophycin synthetase; PFAM: Mur ligase middle domain protein; RimK domain protein ATP-grasp; cytoplasmic peptidoglycan synthetase domain protein
YP_003847387.1	TIGRFAM: cyanophycin synthetase; KEGG: cyanophycin synthetase; PFAM: Mur ligase middle domain protein; Carbamoyl-phosphate synthase L chain ATP-binding
YP_003847388.1	KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_003847389.1	KEGG: domain of unknown function DUF1854
YP_003847390.1	PFAM: Protein of unknown function DUF3578; KEGG: ppr:PBPRA0195 hypothetical protein
YP_003847391.1	PFAM: Domain of unknown function DUF2357; protein of unknown function DUF524; KEGG: gur:Gura_4117 hypothetical protein
YP_003847392.1	KEGG: nhl:Nhal_2021 hypothetical protein
YP_003847393.1	PFAM: PilT protein domain protein; KEGG: nhl:Nhal_2022 PilT protein domain protein
YP_003847394.1	KEGG: slt:Slit_1539 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_003847395.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: app:CAP2UW1_1033 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein
YP_003847396.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: slt:Slit_0477 putative signal transduction protein
YP_003847397.1	KEGG: mmb:Mmol_1047 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: cyclic nucleotide-binding
YP_003847398.1	KEGG: mmb:Mmol_1046 hypothetical protein
YP_003847399.1	PFAM: Forkhead-associated protein; KEGG: mmb:Mmol_1045 FHA domain containing protein
YP_003847400.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: glo:Glov_3614 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein
YP_003847401.1	PFAM: sodium/calcium exchanger membrane region; KEGG: slt:Slit_1596 sodium/calcium exchanger membrane region
YP_003847402.1	KEGG: slt:Slit_1595 hypothetical protein
YP_003847403.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: slt:Slit_1800 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_003847404.1	KEGG: slt:Slit_1801 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein
YP_003847405.1	SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: slt:Slit_1802 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein
YP_003847406.1	TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: slt:Slit_1803 ATP-dependent Clp protease, ATP-binding subunit ClpX; SMART: AAA ATPase
YP_003847407.1	TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: slt:Slit_1804 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP
YP_003847408.1	KEGG: slt:Slit_1805 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type
YP_003847409.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold domain protein; PAS fold-3 domain protein; KEGG: rfr:Rfer_2637 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver
YP_003847410.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; KEGG: integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein
YP_003847411.1	KEGG: ppd:Ppro_1429 hypothetical protein
YP_003847412.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); cobalamin B12-binding domain protein; KEGG: ppd:Ppro_1430 uroporphyrinogen decarboxylase
YP_003847413.1	PFAM: ferredoxin; KEGG: mpl:Mpal_1306 ferredoxin
YP_003847414.1	KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003847415.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein
YP_003847416.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; KEGG: rfr:Rfer_2055 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein
YP_003847417.1	KEGG: tps:THAPSDRAFT_39516 hypothetical protein
YP_003847418.1	PFAM: protein of unknown function DUF323; SapC family protein; KEGG: slt:Slit_1352 protein of unknown function DUF323
YP_003847419.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003847420.1	KEGG: slt:Slit_1593 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_003847421.1	KEGG: asa:ASA_2109 two-component system hybrid sensor histidine kinase/response regulator; PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver; Hpt domain protein
YP_003847422.1	KEGG: dol:Dole_2192 glycyl-radical activating family protein; PFAM: Radical SAM domain protein
YP_003847423.1	KEGG: pen:PSEEN3180 hypothetical protein
YP_003847424.1	KEGG: dol:Dole_2191 formate C-acetyltransferase; PFAM: pyruvate formate-lyase PFL
YP_003847425.1	KEGG: slt:Slit_1334 hypothetical protein
YP_003847426.1	KEGG: mei:Msip34_1876 hypothetical protein
YP_003847427.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mfa:Mfla_2634 extradiol ring-cleavage dioxygenase III subunit B
YP_003847428.1	PFAM: Protein of unknown function DUF3124; KEGG: dar:Daro_3348 hypothetical protein
YP_003847429.1	KEGG: slt:Slit_1505 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase DHHA1; phosphoesterase RecJ domain protein
YP_003847430.1	KEGG: slt:Slit_1506 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein
YP_003847431.1	KEGG: oca:OCAR_5140 DNA primase
YP_003847432.1	PFAM: plasmid recombination protein; KEGG: asa:ASA_3671 mobilization protein
YP_003847433.1	PFAM: site-specific recombinase Gcr; KEGG: mei:Msip34_2183 putative site-specific recombinase, prophage insertion
YP_003847434.1	KEGG: nmu:Nmul_A1159 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_003847435.1	KEGG: nmu:Nmul_A1160 hypothetical protein
YP_003847436.1	KEGG: nmu:Nmul_A1161 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase
YP_003847437.1	KEGG: hau:Haur_4563 extracellular solute-binding protein
YP_003847438.1	PFAM: dihydrodipicolinate reductase; KEGG: tau:Tola_0988 dihydrodipicolinate reductase
YP_003847439.1	KEGG: eba:ebB86 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system
YP_003847440.1	KEGG: pph:Ppha_0746 hypothetical protein
YP_003847441.1	KEGG: hypothetical protein
YP_003847442.1	PFAM: Resolvase domain; Recombinase; KEGG: nwi:Nwi_3138 resolvase
YP_003847444.1	KEGG: lbf:LBF_0068 transcriptional regulator
YP_003847445.1	KEGG: rca:Rcas_4297 TrkA domain-containing protein
YP_003847446.1	KEGG: rpe:RPE_4445 hypothetical protein
YP_003847448.1	PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: slt:Slit_0185 NAD-dependent epimerase/dehydratase
YP_003847449.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003847450.1	PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: rce:RC1_2526 hypothetical protein
YP_003847451.1	manually curated; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; KEGG: slt:Slit_1402 lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214
YP_003847452.1	TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: slt:Slit_1401 lipoprotein releasing system, ATP-binding protein; SMART: AAA ATPase
YP_003847453.1	PFAM: Protein of unknown function DUF2062; KEGG: slt:Slit_1397 protein of unknown function DUF2062
YP_003847454.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: slt:Slit_1396 DNA internalization-related competence protein ComEC/Rec2; SMART: beta-lactamase domain protein
YP_003847455.1	KEGG: aba:Acid345_3110 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
YP_003847456.1	KEGG: sus:Acid_3802 hypothetical protein
YP_003847457.1	KEGG: bmj:BMULJ_01375 RND efflux system outer membrane lipoprotein
YP_003847458.1	KEGG: pan:PODANSg10023 hypothetical protein
YP_003847459.1	KEGG: hypothetical protein
YP_003847460.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bvi:Bcep1808_6183 hemerythrin HHE cation binding domain-containing protein
YP_003847461.1	PFAM: type II and III secretion system protein; KEGG: dar:Daro_2854 hypothetical protein
YP_003847462.1	PFAM: NLP/P60 protein; KEGG: slt:Slit_2673 NLP/P60 protein
YP_003847463.1	TIGRFAM: lytic murein transglycosylase B; KEGG: slt:Slit_2674 lytic murein transglycosylase B
YP_003847464.1	KEGG: slt:Slit_2675 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003847465.1	KEGG: slt:Slit_2676 Smr protein/MutS2; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2
YP_003847466.1	KEGG: vap:Vapar_6289 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain-containing protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003847467.1	KEGG: cti:RALTA_A0498 putative response regulator, CheY family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_003847468.1	PFAM: sodium/calcium exchanger membrane region; KEGG: slt:Slit_2526 sodium/calcium exchanger membrane region
YP_003847469.1	PFAM: nitrogen regulatory protein P-II; KEGG: mca:MCA1299 nitrogen regulatory protein P-II, putative
YP_003847470.1	KEGG: mei:Msip34_2243 heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_003847471.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rpf:Rpic12D_3606 efflux transporter, RND family, MFP subunit
YP_003847472.1	PFAM: outer membrane efflux protein; KEGG: noc:Noc_0150 outer membrane efflux protein
YP_003847473.1	KEGG: pcr:Pcryo_1146 adenylosuccinate lyase
YP_003847474.1	KEGG: slt:Slit_1462 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain-containing protein
YP_003847475.1	TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: slt:Slit_1461 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_003847477.1	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: pol:Bpro_1735 hypothetical protein
YP_003847478.1	PFAM: Chemotaxis phosphatase CheZ; KEGG: slt:Slit_0550 chemotaxis phosphatase, CheZ
YP_003847479.1	KEGG: sto:ST2373 hypothetical protein
YP_003847480.1	KEGG: lhk:LHK_01093 SelD; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_003847481.1	TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese domain protein; KEGG: lhk:LHK_01094 tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein
YP_003847482.1	PFAM: AFG1-family ATPase; KEGG: slt:Slit_1454 AFG1-family ATPase
YP_003847483.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: slt:Slit_1453 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003847484.1	TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: slt:Slit_1452 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
YP_003847485.1	KEGG: slt:Slit_1450 fructose-bisphosphate aldolase; manually curated; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
YP_003847486.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; histidine kinase HAMP region domain protein; KEGG: slt:Slit_0322 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003847487.1	TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; KEGG: rfr:Rfer_1986 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region
YP_003847488.1	SMART: beta-lactamase domain protein; KEGG: rfr:Rfer_1985 beta-lactamase-like
YP_003847489.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: slt:Slit_1444 protein of unknown function DUF6 transmembrane
YP_003847490.1	KEGG: har:HEAR0824 phosphonate ABC transporter membrane protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_003847491.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: har:HEAR0825 phosphonate ABC transporter membrane protein
YP_003847492.1	KEGG: har:HEAR0826 phosphonate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003847493.1	KEGG: har:HEAR0827 phosphonate ABC transporter periplasmic substrate-binding protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; PFAM: extracellular solute-binding protein family 3
YP_003847494.1	KEGG: pop:POPTR_551641 hypothetical protein
YP_003847495.1	KEGG: vex:VEA_000614 putative outer membrane lipoprotein
YP_003847496.1	KEGG: pmr:PMI0478 hypothetical protein
YP_003847497.1	KEGG: pen:PSEEN0757 hypothetical protein
YP_003847498.1	KEGG: cch:Cag_0445 hypothetical protein
YP_003847500.1	KEGG: slt:Slit_1443 succinyldiaminopimelate transaminase; TIGRFAM: succinyldiaminopimelate transaminase; PFAM: aminotransferase class I and II
YP_003847501.1	TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: slt:Slit_1442 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
YP_003847502.1	KEGG: slt:Slit_1441 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E
YP_003847503.1	PFAM: arsenate reductase and related; KEGG: mei:Msip34_0931 arsenate reductase and related
YP_003847504.1	KEGG: mei:Msip34_0930 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_003847505.1	KEGG: slt:Slit_1438 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small
YP_003847506.1	TIGRFAM: squalene synthase HpnC; KEGG: slt:Slit_1437 squalene synthase HpnC; PFAM: Squalene/phytoene synthase
YP_003847507.1	KEGG: mar:MAE_20890 hypothetical protein
YP_003847508.1	PFAM: Protein of unknown function DUF2442; KEGG: mcd:MCRO_0265 Holliday junction DNA helicase
YP_003847509.1	TIGRFAM: squalene synthase HpnD; KEGG: slt:Slit_1436 squalene synthase HpnD; PFAM: Squalene/phytoene synthase
YP_003847510.1	KEGG: slt:Slit_1435 squalene-associated FAD-dependent desaturase; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase
YP_003847511.1	KEGG: bxe:Bxe_B1988 hypothetical protein
YP_003847512.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: slt:Slit_1623 tRNA/rRNA methyltransferase (SpoU)
YP_003847513.1	KEGG: slt:Slit_1499 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type
YP_003847514.1	KEGG: slt:Slit_1498 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding
YP_003847515.1	PFAM: Protein of unknown function DUF2892; KEGG: app:CAP2UW1_0811 hypothetical protein
YP_003847516.1	PFAM: protein of unknown function DUF81; KEGG: rme:Rmet_2397 hypothetical protein
YP_003847517.1	KEGG: slt:Slit_1474 copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase
YP_003847518.1	KEGG: hau:Haur_4548 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily
YP_003847519.1	KEGG: slt:Slit_1518 CHAD domain containing protein; PFAM: CHAD domain containing protein; adenylate cyclase; SMART: CHAD domain containing protein
YP_003847520.1	KEGG: dar:Daro_3867 hypothetical protein
YP_003847521.1	KEGG: slt:Slit_1660 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_003847522.1	KEGG: slt:Slit_1388 TonB family protein; TIGRFAM: TonB family protein; PFAM: TonB domain
YP_003847523.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: app:CAP2UW1_0594 TonB-dependent receptor
YP_003847524.1	KEGG: ngk:NGK_2099 hypothetical protein
YP_003847525.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: slt:Slit_1390 biopolymer transport protein ExbD/TolR
YP_003847526.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: slt:Slit_1389 MotA/TolQ/ExbB proton channel
YP_003847527.1	KEGG: mei:Msip34_0374 cytochrome c class I
YP_003847528.1	KEGG: app:CAP2UW1_1077 sulphate transporter; TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS
YP_003847529.1	manually curated; KEGG: bpm:BURPS1710b_3602 hypothetical protein
YP_003847530.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: slt:Slit_1561 putative signal transduction protein
YP_003847531.1	TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: slt:Slit_0980 glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_003847532.1	KEGG: nhl:Nhal_0746 phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
YP_003847533.1	PFAM: acetate and butyrate kinase; KEGG: tbd:Tbd_0832 acetate kinase
YP_003847534.1	PFAM: outer membrane efflux protein; KEGG: mei:Msip34_1222 type I secretion outer membrane protein, TolC family
YP_003847535.1	KEGG: app:CAP2UW1_1980 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003847536.1	KEGG: dar:Daro_1167 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003847537.1	PFAM: protein of unknown function DUF214; KEGG: app:CAP2UW1_1978 protein of unknown function DUF214
YP_003847538.1	PFAM: Protein of unknown function DUF3301; KEGG: slt:Slit_2266 hypothetical protein
YP_003847539.1	PFAM: Domain of unknown function DUF1924; KEGG: mmb:Mmol_2343 domain of unknown function DUF1924
YP_003847540.1	TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: slt:Slit_1790 cytochrome c-type biogenesis protein CcmI
YP_003847541.1	PFAM: cytochrome C biogenesis protein; KEGG: slt:Slit_1791 cytochrome c biogenesis protein
YP_003847542.1	KEGG: slt:Slit_1792 periplasmic protein thiol/disulfide oxidoreductase DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein
YP_003847543.1	KEGG: slt:Slit_1793 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein
YP_003847544.1	PFAM: CcmE/CycJ protein; KEGG: slt:Slit_1794 CcmE/CycJ protein
YP_003847545.1	KEGG: slt:Slit_1795 heme exporter protein CcmD
YP_003847546.1	KEGG: slt:Slit_1796 heme exporter protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein
YP_003847547.1	KEGG: slt:Slit_1797 heme exporter protein CcmB; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB
YP_003847548.1	TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: slt:Slit_1798 heme exporter protein CcmA; SMART: AAA ATPase
YP_003847549.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: slt:Slit_1799 short-chain dehydrogenase/reductase SDR
YP_003847550.1	KEGG: slt:Slit_0549 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003847551.1	PFAM: Chemotaxis phosphatase CheZ; KEGG: slt:Slit_0550 chemotaxis phosphatase, CheZ
YP_003847552.1	KEGG: slt:Slit_1201 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_003847553.1	KEGG: slt:Slit_1202 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; Tetratricopeptide repeat
YP_003847554.1	KEGG: slt:Slit_1637 ribonuclease H; PFAM: ribonuclease HII/HIII
YP_003847555.1	TIGRFAM: lipid-A-disaccharide synthase; KEGG: slt:Slit_1638 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19
YP_003847556.1	KEGG: tbd:Tbd_0797 UDP-N-acetylglucosamine acyltransferase; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_003847557.1	KEGG: eba:ebA5999 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
YP_003847558.1	KEGG: slt:Slit_1641 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein
YP_003847559.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: slt:Slit_1642 outer membrane chaperone Skp (OmpH)
YP_003847560.1	KEGG: slt:Slit_1643 outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein
YP_003847561.1	TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: slt:Slit_1644 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein
YP_003847562.1	TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: slt:Slit_1645 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein
YP_003847563.1	PFAM: phosphatidate cytidylyltransferase; KEGG: slt:Slit_1646 phosphatidate cytidylyltransferase
YP_003847564.1	TIGRFAM: undecaprenyl diphosphate synthase; KEGG: slt:Slit_1647 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_003847565.1	KEGG: slt:Slit_1648 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor
YP_003847566.1	TIGRFAM: uridylate kinase; KEGG: slt:Slit_1649 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_003847567.1	KEGG: slt:Slit_1650 translation elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein
YP_003847568.1	KEGG: slt:Slit_1651 ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2
YP_003847569.1	KEGG: mei:Msip34_0610 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase
YP_003847570.1	PFAM: dihydrouridine synthase DuS; KEGG: cvi:CV_2329 hypothetical protein
YP_003847571.1	KEGG: ure:UREG_00830 similar to NADP-dependent malic enzyme
YP_003847572.1	KEGG: ajs:Ajs_1803 resolvase domain-containing protein; PFAM: Resolvase domain; SMART: Resolvase domain
YP_003847573.1	KEGG: syw:SYNW1641 D-alanyl-alanine synthetase A
YP_003847574.1	KEGG: pmg:P9301_01451 hypothetical protein
YP_003847575.1	KEGG: afl:Aflv_2753 Zn-dependent protease
YP_003847576.1	KEGG: eba:ebA5523 transposase
YP_003847577.1	PFAM: IS66 Orf2 family protein; KEGG: hna:Hneap_2256 IS66 Orf2 family protein
YP_003847578.1	PFAM: transposase IS3/IS911 family protein; KEGG: rpf:Rpic12D_2977 transposase IS3/IS911 family protein
YP_003847579.1	PFAM: aldo/keto reductase; KEGG: slt:Slit_1457 aldo/keto reductase
YP_003847580.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: glo:Glov_2785 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein
YP_003847581.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003847582.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rcu:RCOM_1866310 hypothetical protein
YP_003847583.1	TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: slt:Slit_2203 ATP-dependent chaperone ClpB; SMART: AAA ATPase
YP_003847584.1	TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: slt:Slit_2204 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_003847585.1	KEGG: slt:Slit_2205 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein
YP_003847586.1	PFAM: acriflavin resistance protein; KEGG: slt:Slit_0934 acriflavin resistance protein
YP_003847587.1	KEGG: mpt:Mpe_A2136 putative transporter lipoprotein transmembrane; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003847588.1	PFAM: Methyltransferase type 11; KEGG: slt:Slit_2208 methyltransferase type 11
YP_003847589.1	KEGG: dar:Daro_2876 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related
YP_003847590.1	PFAM: RelA/SpoT domain protein; KEGG: ecz:ECS88_2201 hypothetical protein from phage origin
YP_003847591.1	KEGG: hsl:OE4236F putative phosphate/sulfate permease
YP_003847592.1	PFAM: Auxin Efflux Carrier; KEGG: slt:Slit_2209 auxin efflux carrier
YP_003847593.1	TIGRFAM: threonine synthase; KEGG: slt:Slit_2217 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_003847594.1	KEGG: slt:Slit_2218 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein
YP_003847595.1	KEGG: slt:Slit_2219 aminotransferase class I and II; manually curated; PFAM: aminotransferase class I and II
YP_003847596.1	PFAM: protein of unknown function DUF498; KEGG: slt:Slit_2220 protein of unknown function DUF498
YP_003847597.1	PFAM: ATPase associated with various cellular activities AAA_3; KEGG: slt:Slit_2221 ATPase associated with various cellular activities AAA_3
YP_003847598.1	PFAM: protein of unknown function DUF58; KEGG: slt:Slit_2222 protein of unknown function DUF58
YP_003847599.1	KEGG: slt:Slit_2223 transglutaminase domain protein; PFAM: Protein of unknown function DUF3488; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein
YP_003847600.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: slt:Slit_2224 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
YP_003847601.1	PFAM: integrase family protein; KEGG: ebr:ECB_03516 Int
YP_003847602.1	PFAM: FRG domain protein; KEGG: bpd:BURPS668_2136 hypothetical protein
YP_003847603.1	KEGG: bps:BPSL0736 hypothetical protein
YP_003847604.1	KEGG: cch:Cag_1938 Sel1 repeat-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein
YP_003847605.1	KEGG: pna:Pnap_4162 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_003847606.1	KEGG: csa:Csal_2905 hypothetical protein
YP_003847607.1	KEGG: gyc:GYMC61_3597 CopG domain protein DNA-binding domain protein
YP_003847608.1	KEGG: ajs:Ajs_4243 hypothetical protein
YP_003847609.1	KEGG: ame:409778 similar to knockout CG10573-PA
YP_003847610.1	KEGG: ppf:Pput_3427 phage transcriptional regulator, AlpA; manually curated; PFAM: Prophage CP4-57 regulatory
YP_003847611.1	KEGG: bgl:bglu_2g20710 hypothetical protein
YP_003847613.1	PFAM: HipA domain protein; KEGG: alv:Alvin_0433 HipA domain protein
YP_003847614.1	PFAM: protein of unknown function DUF180; KEGG: dar:Daro_2743 flagellar assembly protein FliW
YP_003847615.1	KEGG: dar:Daro_0127 hypothetical protein
YP_003847616.1	PFAM: protein of unknown function UPF0005; KEGG: slt:Slit_2295 protein of unknown function UPF0005
YP_003847617.1	KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Helix-hairpin-helix DNA-binding class 1
YP_003847618.1	TIGRFAM: gliding motility-associated protein GldC; KEGG: fps:FP2068 gliding motility protein GldC
YP_003847619.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: mmb:Mmol_1760 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003847620.1	KEGG: eba:ebA6051 sensory transduction histidine kinase; PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver; Hpt domain protein
YP_003847621.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; Protein of unknown function DUF2222; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_1768 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein
YP_003847622.1	PFAM: protein of unknown function DUF534; KEGG: eba:ebA3798 hypothetical protein
YP_003847623.1	KEGG: slt:Slit_2298 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase
YP_003847624.1	PFAM: VanZ family protein; KEGG: mca:MCA1638 hypothetical protein
YP_003847625.1	PFAM: 3'-5' exonuclease, PolB-like; KEGG: slt:Slit_2299 3'-5' exonuclease, PolB-like protein
YP_003847626.1	KEGG: mei:Msip34_0941 hypothetical protein
YP_003847627.1	KEGG: mei:Msip34_0940 hypothetical protein
YP_003847628.1	KEGG: slt:Slit_1656 dienelactone hydrolase
YP_003847629.1	PFAM: protein of unknown function DUF190; KEGG: slt:Slit_2030 protein of unknown function DUF190
YP_003847630.1	KEGG: slt:Slit_2031 CrcB protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein
YP_003847631.1	KEGG: slt:Slit_1848 hypothetical protein
YP_003847632.1	KEGG: slt:Slit_1849 putative lipoprotein transmembrane
YP_003847633.1	TIGRFAM: acetyl-CoA acetyltransferase; KEGG: slt:Slit_1850 acetyl-CoA acetyltransferase; PFAM: Thiolase-like
YP_003847634.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: slt:Slit_1856 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
YP_003847635.1	KEGG: afw:Anae109_0035 membrane protein involved in aromatic hydrocarbon degradation
YP_003847636.1	PFAM: thioesterase superfamily protein; KEGG: slt:Slit_1858 thioesterase superfamily protein
YP_003847637.1	PFAM: AMP-dependent synthetase and ligase; KEGG: slt:Slit_1859 AMP-dependent synthetase and ligase
YP_003847638.1	PFAM: protein of unknown function DUF1974; acyl-CoA dehydrogenase domain-containing protein; KEGG: slt:Slit_1861 protein of unknown function DUF1974
YP_003847639.1	TIGRFAM: DNA repair protein RadA; PFAM: Circadian clock protein KaiC central region; KEGG: slt:Slit_1331 DNA repair protein RadA; SMART: AAA ATPase
YP_003847640.1	KEGG: ppd:Ppro_2990 chitinase-like protein
YP_003847641.1	KEGG: slt:Slit_1315 helicase C2; PFAM: type III restriction protein res subunit; SMART: helicase c2; DEAD-like helicase
YP_003847642.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rfr:Rfer_2480 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3
YP_003847643.1	KEGG: slt:Slit_1407 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7
YP_003847644.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: slt:Slit_1408 tripartite ATP-independent periplasmic transporter DctQ component
YP_003847645.1	KEGG: slt:Slit_1409 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_003847646.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003847647.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: slt:Slit_0467 excinuclease ABC C subunit domain protein
YP_003847648.1	KEGG: slt:Slit_0466 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_003847649.1	KEGG: slt:Slit_0463 RNA-binding S4 domain protein; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003847650.1	KEGG: slt:Slit_1312 ankyrin; PFAM: Ankyrin; SMART: Ankyrin
YP_003847651.1	KEGG: slt:Slit_0552 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_003847652.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: slt:Slit_2321 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003847653.1	KEGG: alv:Alvin_0242 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003847654.1	KEGG: app:CAP2UW1_2697 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_003847655.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: geo:Geob_2297 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003847656.1	TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; PAS fold-3 domain protein; KEGG: mmb:Mmol_1925 diguanylate cyclase with PAS/PAC sensor; SMART: regulatory protein LuxR; PAC repeat-containing protein; PAS domain containing protein
YP_003847657.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003847659.1	PFAM: protein of unknown function DUF1778; KEGG: app:CAP2UW1_3511 protein of unknown function DUF1778
YP_003847660.1	PFAM: GCN5-related N-acetyltransferase; KEGG: app:CAP2UW1_3510 GCN5-related N-acetyltransferase
YP_003847661.1	KEGG: azl:AZL_e01980 hypothetical protein
YP_003847662.1	KEGG: mms:mma_0902 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003847663.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mmb:Mmol_0116 cytochrome c biogenesis protein transmembrane region
YP_003847664.1	PFAM: Thioredoxin domain-containing protein; KEGG: mmb:Mmol_0115 thioredoxin domain protein
YP_003847666.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: aeh:Mlg_0234 hypothetical protein
YP_003847667.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pfl:PFL_6147 YeeE/YedE family protein
YP_003847668.1	KEGG: pol:Bpro_4798 MerR family transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR
YP_003847669.1	PFAM: Mercuric transport protein MerT; KEGG: hna:Hneap_1212 mercuric transport protein MerT
YP_003847670.1	KEGG: hna:Hneap_1211 mercuric transport protein periplasmic component; TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein
YP_003847671.1	PFAM: Mercury ion transport, MerF; KEGG: nhl:Nhal_1677 hypothetical protein
YP_003847672.1	KEGG: asa:ASA_P4G091 putative mercuric reductase; TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region
YP_003847673.1	manually curated; KEGG: pla:Plav_0352 hypothetical protein
YP_003847674.1	PFAM: fatty acid hydroxylase; KEGG: tgr:Tgr7_1960 sterol desaturase-related protein
YP_003847675.1	PFAM: phosphate transporter; KEGG: ote:Oter_0303 phosphate transporter
YP_003847676.1	PFAM: Methyltransferase type 11; KEGG: hch:HCH_02988 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase
YP_003847677.1	KEGG: cwo:Cwoe_2511 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain-containing protein
YP_003847678.1	KEGG: pca:Pcar_0923 6-phosphogluconolactonase, glucosamine-6-phosphate isomerase/deaminase; TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase
YP_003847679.1	KEGG: slt:Slit_0981 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase
YP_003847680.1	TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: tgr:Tgr7_0872 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase
YP_003847681.1	KEGG: noc:Noc_1825 hypothetical protein
YP_003847682.1	PFAM: Amylo-alpha-16-glucosidase; KEGG: noc:Noc_1826 glycogen debranching protein
YP_003847683.1	KEGG: slt:Slit_1203 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_003847684.1	PFAM: Protein of unknown function DUF3047; KEGG: tmz:Tmz1t_2738 hypothetical protein
YP_003847685.1	PFAM: Protein of unknown function DUF2064; KEGG: eba:ebA1114 hypothetical protein
YP_003847686.1	PFAM: glycosyl transferase family 2; KEGG: rfr:Rfer_1623 glycosyl transferase family protein
YP_003847687.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SNARE associated Golgi protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rfr:Rfer_1621 pyridine nucleotide-disulphide oxidoreductase dimerisation protein
YP_003847688.1	KEGG: noc:Noc_0590 radical SAM domain-containing protein
YP_003847689.1	KEGG: lch:Lcho_3804 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1
YP_003847690.1	KEGG: diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein
YP_003847691.1	KEGG: net:Neut_1026 sulfate ABC transporter, inner membrane subunit CysT; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_003847692.1	KEGG: dac:Daci_4588 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_003847693.1	TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: dar:Daro_3690 sulphate transport system permease protein 1; SMART: AAA ATPase
YP_003847694.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nmu:Nmul_A1739 transcriptional regulator CysB-like protein
YP_003847695.1	KEGG: rfr:Rfer_1604 hypothetical protein
YP_003847696.1	KEGG: rfr:Rfer_1603 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_003847697.1	KEGG: rfr:Rfer_1602 hypothetical protein
YP_003847698.1	KEGG: rfr:Rfer_1601 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003847699.1	KEGG: par:Psyc_1155 methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1
YP_003847700.1	KEGG: swd:Swoo_2971 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_003847701.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: bph:Bphy_5163 carboxymuconolactone decarboxylase
YP_003847702.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: abo:ABO_1090 hypothetical protein
YP_003847703.1	KEGG: rfr:Rfer_1600 hypothetical protein
YP_003847704.1	KEGG: rfr:Rfer_1602 hypothetical protein
YP_003847705.1	PFAM: protein of unknown function DUF427; KEGG: slt:Slit_1777 protein of unknown function DUF427
YP_003847706.1	PFAM: protein of unknown function DUF323; KEGG: slt:Slit_1778 protein of unknown function DUF323
YP_003847707.1	KEGG: slt:Slit_1779 methyltransferase; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260
YP_003847708.1	KEGG: slt:Slit_1780 protein of unknown function DUF6 transmembrane; manually curated; PFAM: protein of unknown function DUF6 transmembrane
YP_003847709.1	PFAM: aminotransferase class I and II; KEGG: slt:Slit_1781 aminotransferase class I and II
YP_003847710.1	manually curated; PFAM: helix-turn-helix domain protein; KEGG: dar:Daro_2567 helix-hairpin-helix DNA-binding motif-containing protein; SMART: helix-turn-helix domain protein
YP_003847711.1	KEGG: psp:PSPPH_3288 periplasmic lipoprotein
YP_003847712.1	PFAM: integrase family protein; KEGG: hypothetical protein
YP_003847713.1	KEGG: tca:660041 similar to cabut
YP_003847714.1	KEGG: pan:PODANSg6192 hypothetical protein
YP_003847715.1	KEGG: pmr:PMI2437 plasmid-related protein
YP_003847716.1	KEGG: svo:SVI_2074 ribosomal protein S1
YP_003847717.1	KEGG: pat:Patl_4039 sulfite reductase (NADPH) flavoprotein, alpha chain
YP_003847718.1	TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: azo:azo1073 integration host factor subunit beta; SMART: histone family protein DNA-binding protein
YP_003847720.1	KEGG: ssa:SSA_1337 hypothetical protein
YP_003847722.1	KEGG: nar:Saro_0597 4-hydroxyphenylpyruvate dioxygenase
YP_003847723.1	KEGG: tbd:Tbd_1587 sensor protein
YP_003847724.1	PFAM: TOPRIM domain-containing protein; DNA topoisomerase type IA central domain protein; KEGG: eca:ECA0525 DNA topoisomerase III; SMART: DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; DNA topoisomerase I DNA-binding
YP_003847726.1	KEGG: bbu:BB0106 hypothetical protein
YP_003847727.1	PFAM: integrase family protein; KEGG: avn:Avin_20500 phage integrase
YP_003847728.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: slt:Slit_2533 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003847729.1	TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: slt:Slit_1743 replicative DNA helicase; SMART: AAA ATPase
YP_003847730.1	KEGG: app:CAP2UW1_2563 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein
YP_003847731.1	KEGG: slt:Slit_1744 ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like
YP_003847732.1	KEGG: slt:Slit_1745 ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18
YP_003847733.1	KEGG: mei:Msip34_1434 ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like
YP_003847734.1	PFAM: CheB methylesterase; avirulence protein Avr/PthA; response regulator receiver; KEGG: aha:AHA_1030 chemotaxis-specific methylesterase; SMART: response regulator receiver
YP_003847735.1	PFAM: CheD family protein; KEGG: slt:Slit_1584 CheD
YP_003847736.1	PFAM: MCP methyltransferase CheR-type; KEGG: slt:Slit_1585 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type
YP_003847737.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: app:CAP2UW1_3451 putative signal transduction protein
YP_003847738.1	PFAM: CheD family protein; KEGG: dar:Daro_1145 hypothetical protein
YP_003847739.1	KEGG: slt:Slit_0546 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer
YP_003847740.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: slt:Slit_1181 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003847741.1	KEGG: app:CAP2UW1_3443 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein
YP_003847742.1	KEGG: dar:Daro_1143 histidine kinase, HAMP region: chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003847743.1	KEGG: azo:azo0408 putative chemotaxis protein histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein
YP_003847744.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rcu:RCOM_0025820 hypothetical protein
YP_003847745.1	KEGG: rcu:RCOM_0025810 hypothetical protein; PFAM: chemotaxis sensory transducer; Chemotaxis phosphatase CheZ; SMART: chemotaxis sensory transducer
YP_003847746.1	KEGG: azo:azo0411 chemotaxis response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003847747.1	TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; KEGG: slt:Slit_1035 sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein
YP_003847748.1	TIGRFAM: sulfate adenylyltransferase, small subunit; KEGG: slt:Slit_1034 sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase
YP_003847749.1	TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; KEGG: slt:Slit_1033 adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase
YP_003847750.1	PFAM: uncharacterized conserved protein UCP030820; KEGG: mms:mma_2453 hypothetical protein
YP_003847751.1	PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: mms:mma_2452 sulfite reductase (NADPH) hemoprotein beta-component
YP_003847752.1	KEGG: ptr:736455 hypothetical protein LOC736455
YP_003847753.1	PFAM: protein of unknown function DUF81; KEGG: slt:Slit_1031 protein of unknown function DUF81
YP_003847754.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: slt:Slit_1030 transcriptional regulator, LysR family
YP_003847755.1	KEGG: dar:Daro_0041 hypothetical protein
YP_003847756.1	KEGG: alv:Alvin_1370 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003847757.1	KEGG: slt:Slit_1028 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein
YP_003847758.1	PFAM: Protein of unknown function DUF3579; KEGG: slt:Slit_1027 hypothetical protein
YP_003847759.1	KEGG: mfa:Mfla_2211 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20
YP_003847760.1	KEGG: slt:Slit_1024 acetylornithine and succinylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III
YP_003847761.1	TIGRFAM: ornithine carbamoyltransferase; KEGG: slt:Slit_1023 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region
YP_003847762.1	KEGG: ornithine carbamoyltransferase
YP_003847763.1	KEGG: pph:Ppha_0193 hypothetical protein
YP_003847764.1	PFAM: Protein of unknown function DUF2442; KEGG: dba:Dbac_2568 hypothetical protein
YP_003847765.1	KEGG: slt:Slit_0397 hypothetical protein
YP_003847766.1	TIGRFAM: argininosuccinate synthase; KEGG: slt:Slit_1022 argininosuccinate synthase; PFAM: argininosuccinate synthase
YP_003847767.1	PFAM: protein of unknown function DUF1255; KEGG: dar:Daro_3029 hypothetical protein
YP_003847768.1	PFAM: protein of unknown function DUF520; KEGG: slt:Slit_1019 protein of unknown function DUF520
YP_003847769.1	KEGG: tbd:Tbd_1950 hypothetical protein
YP_003847770.1	KEGG: slt:Slit_1017 DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein
YP_003847771.1	KEGG: slt:Slit_1016 hypothetical protein
YP_003847772.1	PFAM: OsmC family protein; KEGG: dar:Daro_3682 hypothetical protein
YP_003847773.1	KEGG: slt:Slit_2496 decaheme-associated outer membrane protein, MtrB/PioB family; TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family; PFAM: Decahaem-associated outer membrane protein, MtrB/PioB
YP_003847774.1	TIGRFAM: decaheme c-type cytochrome, DmsE family; cytochrome C family protein; KEGG: dar:Daro_1402 double CXXCH motif-containing protein
YP_003847775.1	PFAM: cytochrome c class I; KEGG: dar:Daro_1401 cytochrome c, class I
YP_003847776.1	PFAM: Cytochrome b/b6 domain; KEGG: dar:Daro_1404 cytochrome c family protein
YP_003847777.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: tmz:Tmz1t_0384 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_003847778.1	KEGG: rfr:Rfer_3096 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_003847779.1	KEGG: aeh:Mlg_0220 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_003847780.1	TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: slt:Slit_2239 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_003847781.1	KEGG: lch:Lcho_3760 hypothetical protein
YP_003847782.1	KEGG: slt:Slit_2241 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit
YP_003847783.1	KEGG: mei:Msip34_1254 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein
YP_003847784.1	KEGG: dar:Daro_0704 response regulator receiver:transcriptional regulatory protein, C-terminal; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein
YP_003847785.1	KEGG: mei:Msip34_1252 P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein-like protein
YP_003847786.1	KEGG: mei:Msip34_1251 calcium-binding EF-hand-containing protein; PFAM: EF-Hand, Calmodulin; SMART: Calcium-binding EF-hand-containing protein
YP_003847787.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: tmz:Tmz1t_0270 ATPase, P-type (transporting), HAD superfamily, subfamily IC; SMART: cation transporting ATPase domain protein
YP_003847788.1	KEGG: dar:Daro_1043 cation efflux protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein
YP_003847789.1	PFAM: nitroreductase; KEGG: mei:Msip34_1224 nitroreductase
YP_003847790.1	SMART: helix-turn-helix domain protein; KEGG: tmz:Tmz1t_3905 putative transcription regulator with HTH domain
YP_003847791.1	PFAM: Protein of unknown function DUF2136; KEGG: bbr:BB3160 hypothetical protein
YP_003847792.1	KEGG: ngk:NGK_1473 putative phage associated protein
YP_003847793.1	KEGG: cts:Ctha_0305 hypothetical protein
YP_003847794.1	KEGG: rso:RSc1866 hypothetical protein
YP_003847795.1	KEGG: ote:Oter_1330 hypothetical protein
YP_003847796.1	KEGG: eic:NT01EI_1990 hypothetical protein
YP_003847797.1	KEGG: hypothetical protein
YP_003847798.1	KEGG: ctt:CtCNB1_2634 hypothetical protein
YP_003847799.1	KEGG: bav:BAV0420 phage protein
YP_003847800.1	KEGG: lth:KLTH0E09922g KLTH0E09922p
YP_003847801.1	TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: dar:Daro_1220 primary replicative DNA helicase; SMART: AAA ATPase
YP_003847802.1	KEGG: rpf:Rpic12D_3448 hypothetical protein
YP_003847804.1	KEGG: hypothetical protein
YP_003847805.1	KEGG: hypothetical protein
YP_003847806.1	KEGG: avn:Avin_17010 prophage CP4-57 regulatory, AlpA-like protein; manually curated; PFAM: Prophage CP4-57 regulatory
YP_003847807.1	PFAM: Prophage CP4-57 regulatory; KEGG: nmu:Nmul_A0062 putative transcriptional regulator
YP_003847808.1	KEGG: tbd:Tbd_2676 hypothetical protein
YP_003847809.1	KEGG: tmz:Tmz1t_3858 XRE family plasmid maintenance system antidote protein; TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein
YP_003847810.1	PFAM: plasmid maintenance system killer; KEGG: app:CAP2UW1_0205 plasmid maintenance system killer
YP_003847811.1	PFAM: integrase family protein; KEGG: rso:RSc0968 cp4-like integrase protein
YP_003847812.1	KEGG: slt:Slit_2140 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
YP_003847813.1	KEGG: slt:Slit_2139 hypothetical protein
YP_003847814.1	KEGG: slt:Slit_2138 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003847815.1	PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: cch:Cag_0891 metacaspase
YP_003847816.1	KEGG: slt:Slit_2096 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase
YP_003847817.1	KEGG: slt:Slit_2095 hypothetical protein
YP_003847818.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: slt:Slit_2094 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_003847819.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: nmu:Nmul_A1055 peptidase U62, modulator of DNA gyrase
YP_003847820.1	KEGG: slt:Slit_2509 hypothetical protein
YP_003847821.1	KEGG: rme:Rmet_4634 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A
YP_003847822.1	KEGG: geo:Geob_1071 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_003847823.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: slt:Slit_2091 riboflavin biosynthesis protein RibF; SMART: Riboflavin kinase
YP_003847824.1	KEGG: slt:Slit_2090 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase
YP_003847825.1	KEGG: slt:Slit_2089 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II
YP_003847826.1	TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: slt:Slit_2088 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein
YP_003847827.1	KEGG: slt:Slit_2081 glycine oxidase ThiO; TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase
YP_003847828.1	PFAM: nitroreductase; KEGG: slt:Slit_1251 nitroreductase
YP_003847829.1	KEGG: mms:mma_2613 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like
YP_003847830.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: slt:Slit_2226 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003847831.1	KEGG: sat:SYN_01953 response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_003847832.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: tcx:Tcr_1150 diguanylate cyclase/phosphodiesterase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein
YP_003847833.1	KEGG: slt:Slit_2080 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003847834.1	KEGG: slt:Slit_2079 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003847835.1	PFAM: protein of unknown function DUF214; KEGG: slt:Slit_2078 protein of unknown function DUF214
YP_003847836.1	PFAM: protein of unknown function DUF214; KEGG: slt:Slit_2077 protein of unknown function DUF214
YP_003847837.1	PFAM: cobalamin biosynthesis protein CbiB; KEGG: slt:Slit_1036 cobalamin biosynthesis protein CbiB
YP_003847838.1	PFAM: Protein of unknown function DUF2934; KEGG: app:CAP2UW1_2164 hypothetical protein
YP_003847839.1	PFAM: DAHP synthetase I/KDSA; KEGG: slt:Slit_0738 DAHP synthetase I/KdsA
YP_003847840.1	KEGG: slt:Slit_0736 pyrimidine 5'-nucleotidase; TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_003847841.1	TIGRFAM: acetylglutamate kinase; KEGG: slt:Slit_0735 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_003847842.1	PFAM: protein of unknown function DUF461; KEGG: slt:Slit_0732 protein of unknown function DUF461
YP_003847843.1	KEGG: slt:Slit_0730 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003847844.1	KEGG: slt:Slit_0729 two component transcriptional regulator, fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver
YP_003847845.1	TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; KEGG: slt:Slit_0728 putative signal transduction protein; SMART: metal-dependent phosphohydrolase HD region
YP_003847846.1	TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; KEGG: slt:Slit_0728 putative signal transduction protein; SMART: metal-dependent phosphohydrolase HD region
YP_003847847.1	KEGG: slt:Slit_2377 hypothetical protein
YP_003847848.1	KEGG: slt:Slit_0726 beta-lactamase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein
YP_003847849.1	PFAM: aminotransferase class IV; KEGG: slt:Slit_0725 aminotransferase class IV
YP_003847850.1	PFAM: protein of unknown function DUF493; KEGG: slt:Slit_0724 protein of unknown function DUF493
YP_003847851.1	TIGRFAM: lipoate-protein ligase B; KEGG: slt:Slit_0723 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase
YP_003847852.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: slt:Slit_2313 lipoic acid synthetase; PFAM: Radical SAM domain protein
YP_003847853.1	PFAM: cytochrome c class I; KEGG: cytochrome c class I
YP_003847854.1	PFAM: ribonuclease II; KEGG: slt:Slit_0508 ribonuclease II
YP_003847855.1	TIGRFAM: TonB family protein; KEGG: slt:Slit_0507 TonB family protein
YP_003847856.1	KEGG: mei:Msip34_0170 hypothetical protein
YP_003847857.1	KEGG: slt:Slit_0503 hypothetical protein
YP_003847858.1	PFAM: periplasmic solute binding protein; KEGG: slt:Slit_0502 periplasmic solute binding protein
YP_003847859.1	PFAM: ABC-3 protein; KEGG: slt:Slit_0501 ABC-3 protein
YP_003847860.1	KEGG: slt:Slit_0482 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase
YP_003847861.1	KEGG: slt:Slit_0481 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51
YP_003847862.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: slt:Slit_0546 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003847863.1	KEGG: slt:Slit_0475 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_003847864.1	KEGG: pmr:PMI3335 lipoprotein
YP_003847865.1	KEGG: slt:Slit_0473 iron donor protein CyaY; TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein
YP_003847866.1	PFAM: protein of unknown function DUF45; KEGG: slt:Slit_0472 protein of unknown function DUF45
YP_003847867.1	KEGG: slt:Slit_0471 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase
YP_003847868.1	TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: slt:Slit_0470 histidinol-phosphate phosphatase family protein
YP_003847869.1	TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: tbd:Tbd_2347 glycyl-tRNA synthetase, beta subunit
YP_003847870.1	TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: dar:Daro_3534 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit
YP_003847871.1	PFAM: Protein of unknown function DUF3106; KEGG: pnu:Pnuc_0583 hypothetical protein
YP_003847872.1	PFAM: Protein of unknown function DUF3330; KEGG: noc:Noc_1614 hypothetical protein
YP_003847873.1	TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; protein of unknown function UPF0004 ; deoxyribonuclease/rho motif-related TRAM; KEGG: slt:Slit_2033 MiaB-like tRNA modifying enzyme YliG; SMART: Elongator protein 3/MiaB/NifB
YP_003847874.1	PFAM: zinc/iron permease; KEGG: slt:Slit_2034 zinc/iron permease
YP_003847875.1	PFAM: protein of unknown function DUF480; KEGG: lch:Lcho_2066 hypothetical protein
YP_003847876.1	PFAM: protein of unknown function DUF152; KEGG: slt:Slit_2037 protein of unknown function DUF152
YP_003847877.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: slt:Slit_2038 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein
YP_003847878.1	TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: slt:Slit_2039 outer membrane assembly lipoprotein YfiO
YP_003847879.1	PFAM: NUDIX hydrolase; KEGG: slt:Slit_2040 NUDIX hydrolase
YP_003847880.1	PFAM: VacJ family lipoprotein; KEGG: slt:Slit_2049 VacJ family lipoprotein
YP_003847881.1	KEGG: pna:Pnap_4175 hypothetical protein
YP_003847882.1	PFAM: ABC-1 domain-containing protein; KEGG: pna:Pnap_4176 hypothetical protein
YP_003847883.1	PFAM: peptidase M48 Ste24p; KEGG: slt:Slit_2050 HtpX domain protein
YP_003847884.1	PFAM: Protein of unknown function DUF2132; KEGG: slt:Slit_2825 protein of unknown function DUF2132
YP_003847885.1	KEGG: slt:Slit_2824 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003847886.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: slt:Slit_1181 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003847887.1	KEGG: swd:Swoo_3780 putative aliphatic amidase expression-regulating protein
YP_003847888.1	PFAM: sulphate transporter; KEGG: mfa:Mfla_0005 sulphate transporter
YP_003847889.1	KEGG: hypothetical protein
YP_003847890.1	PFAM: ammonium transporter; KEGG: slt:Slit_1085 ammonium transporter
YP_003847891.1	PFAM: NUDIX hydrolase; KEGG: slt:Slit_1084 NUDIX hydrolase
YP_003847892.1	KEGG: slt:Slit_1083 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_003847893.1	KEGG: slt:Slit_1082 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_003847894.1	KEGG: slt:Slit_1081 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein
YP_003847895.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: slt:Slit_1080 NADH-ubiquinone oxidoreductase chain 4L
YP_003847896.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: slt:Slit_1079 NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_003847897.1	KEGG: slt:Slit_1078 NADH-quinone oxidoreductase, chain I; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_003847898.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: slt:Slit_1077 NADH dehydrogenase (quinone)
YP_003847899.1	KEGG: slt:Slit_1076 NADH-quinone oxidoreductase, chain G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase; ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
YP_003847900.1	TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: slt:Slit_1075 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain
YP_003847901.1	KEGG: slt:Slit_1074 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit
YP_003847902.1	TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: slt:Slit_1073 NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa
YP_003847904.1	TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; KEGG: rme:Rmet_0929 NADH dehydrogenase subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_003847905.1	TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: mei:Msip34_0672 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_003847906.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mei:Msip34_0671 NADH-ubiquinone/plastoquinone oxidoreductase chain 3
YP_003847907.1	KEGG: cbr:CBG15697 Hypothetical protein CBG15697
YP_003847908.1	KEGG: tva:TVAG_216960 viral A-type inclusion protein
YP_003847909.1	PFAM: replication gene A; KEGG: lhk:LHK_00907 putative phage replication protein
YP_003847910.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003847911.1	KEGG: tet:TTHERM_00095640 hypothetical protein
YP_003847912.1	PFAM: Prophage CP4-57 regulatory; KEGG: rso:RSc1897 hypothetical protein
YP_003847913.1	PFAM: integrase family protein; KEGG: rso:RSc0968 cp4-like integrase protein
YP_003847914.1	KEGG: slt:Slit_1069 preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit
YP_003847915.1	TIGRFAM: triosephosphate isomerase; KEGG: tbd:Tbd_1140 triosephosphate isomerase; PFAM: triosephosphate isomerase
YP_003847916.1	TIGRFAM: aspartate 1-decarboxylase; KEGG: slt:Slit_0952 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase
YP_003847917.1	KEGG: slt:Slit_0951 pantoate/beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase
YP_003847918.1	TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: slt:Slit_0950 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_003847919.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: slt:Slit_0948 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_003847920.1	KEGG: slt:Slit_0947 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region
YP_003847921.1	TIGRFAM: dihydrodipicolinate reductase; KEGG: slt:Slit_1051 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase
YP_003847922.1	PFAM: SmpA/OmlA domain-containing protein; KEGG: slt:Slit_1050 SmpA/OmlA domain protein
YP_003847923.1	KEGG: slt:Slit_1049 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein
YP_003847924.1	PFAM: ATP-NAD/AcoX kinase; KEGG: slt:Slit_1048 ATP-NAD/AcoX kinase
YP_003847925.1	KEGG: ppu:PP_0196 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003847926.1	KEGG: avn:Avin_11590 putative SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890
YP_003847927.1	PFAM: protein of unknown function UPF0153; KEGG: dar:Daro_1958 hypothetical protein
YP_003847928.1	PFAM: acriflavin resistance protein; KEGG: app:CAP2UW1_0551 acriflavin resistance protein
YP_003847929.1	KEGG: app:CAP2UW1_0550 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003847930.1	TIGRFAM: ferrochelatase; KEGG: slt:Slit_1046 ferrochelatase; PFAM: ferrochelatase
YP_003847931.1	KEGG: pmx:PERMA_0988 adenylate cyclase
YP_003847932.1	PFAM: UspA domain-containing protein; KEGG: slt:Slit_2153 UspA domain protein
YP_003847933.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold domain protein; KEGG: slt:Slit_1044 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003847934.1	manually curated; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: slt:Slit_1043 exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_003847935.1	KEGG: slt:Slit_1042 STE24 endopeptidase; PFAM: peptidase M48 Ste24p
YP_003847936.1	KEGG: slt:Slit_1041 hypothetical protein
YP_003847937.1	KEGG: slt:Slit_1039 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC
YP_003847938.1	PFAM: protein of unknown function DUF1415; KEGG: mms:mma_2661 hypothetical protein
YP_003847939.1	PFAM: aminoglycoside phosphotransferase; KEGG: har:HEAR0880 serine/threonine protein kinase
YP_003847940.1	PFAM: aminotransferase class I and II; KEGG: slt:Slit_1787 aminotransferase class I and II
YP_003847941.1	PFAM: Methyltransferase type 12; KEGG: mpt:Mpe_A2423 hypothetical protein
YP_003847942.1	PFAM: DsrE family protein; KEGG: ote:Oter_4455 DsrE family protein
YP_003847943.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE2274 hypothetical protein
YP_003847945.1	KEGG: mms:mma_1796 cation-translocating P-type ATPase; TIGRFAM: cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase
YP_003847946.1	KEGG: mvu:Metvu_0232 hypothetical protein
YP_003847947.1	PFAM: iron permease FTR1; KEGG: slt:Slit_2529 iron permease FTR1
YP_003847948.1	KEGG: slt:Slit_2530 hypothetical protein
YP_003847949.1	PFAM: ferric-uptake regulator; KEGG: slt:Slit_2531 ferric uptake regulator, Fur family
YP_003847950.1	PFAM: protein of unknown function DUF302; KEGG: afe:Lferr_0210 protein of unknown function DUF302
YP_003847951.1	PFAM: Protein of unknown function DUF2078, membrane; KEGG: afe:Lferr_0211 hypothetical protein
YP_003847952.1	PFAM: nitrogen regulatory protein P-II; KEGG: dar:Daro_2625 nitrogen regulatory protein P-II
YP_003847953.1	KEGG: app:CAP2UW1_4548 heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_003847954.1	KEGG: dar:Daro_2627 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003847955.1	PFAM: outer membrane efflux protein; KEGG: dar:Daro_2254 outer membrane efflux protein
YP_003847956.1	KEGG: dar:Daro_2629 hypothetical protein
YP_003847957.1	KEGG: tmz:Tmz1t_0071 hypothetical protein
YP_003847958.1	PFAM: Protein of unknown function DUF2798; KEGG: rfr:Rfer_3643 hypothetical protein
YP_003847959.1	KEGG: bmj:BMULJ_02329 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_003847960.1	PFAM: protein of unknown function DUF891; KEGG: afr:AFE_1384 hypothetical protein
YP_003847961.1	KEGG: tcu:Tcur_1657 CbbX protein
YP_003847962.1	PFAM: Protein of unknown function DUF3365; KEGG: app:CAP2UW1_0901 cytochrome c family protein
YP_003847963.1	PFAM: Protein of unknown function DUF2892; KEGG: pna:Pnap_3267 hypothetical protein
YP_003847964.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: slt:Slit_2284 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
YP_003847965.1	SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: slt:Slit_2286 cupin 4 family protein
YP_003847966.1	KEGG: slt:Slit_2287 hypothetical protein
YP_003847967.1	SMART: beta-lactamase domain protein; KEGG: slt:Slit_2288 beta-lactamase domain protein
YP_003847968.1	KEGG: nmu:Nmul_A1539 NlpBDapX lipoprotein
YP_003847969.1	KEGG: slt:Slit_2290 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase
YP_003847970.1	KEGG: slt:Slit_2291 FeoA family protein; PFAM: FeoA family protein; SMART: FeoA family protein
YP_003847971.1	KEGG: slt:Slit_2292 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; Ferrous iron transport B domain-containing protein; nucleoside recognition domain protein
YP_003847972.1	PFAM: Septum formation initiator; KEGG: slt:Slit_1883 septum formation initiator
YP_003847973.1	TIGRFAM: enolase; KEGG: slt:Slit_1884 enolase; PFAM: Enolase-like
YP_003847974.1	KEGG: slt:Slit_1885 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_003847975.1	TIGRFAM: CTP synthase; KEGG: slt:Slit_1886 CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I
YP_003847976.1	KEGG: slt:Slit_1976 acetate/CoA ligase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_003847977.1	PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; KEGG: slt:Slit_1977 lytic transglycosylase catalytic
YP_003847978.1	KEGG: slt:Slit_1978 hypothetical protein
YP_003847979.1	KEGG: slt:Slit_1979 protein of unknown function DUF2311, membrane
YP_003847980.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: slt:Slit_1980 protein of unknown function DUF883 ElaB
YP_003847981.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: slt:Slit_1981 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_003847982.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slt:Slit_1982 binding-protein-dependent transport systems inner membrane component
YP_003847983.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slt:Slit_1983 binding-protein-dependent transport systems inner membrane component
YP_003847984.1	PFAM: extracellular solute-binding protein family 5; KEGG: nhl:Nhal_0798 extracellular solute-binding protein family 5
YP_003847985.1	KEGG: hypothetical protein
YP_003847986.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: slt:Slit_2071 adenylate/guanylate cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_003847987.1	KEGG: slt:Slit_1987 folate-binding protein YgfZ; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase)
YP_003847988.1	KEGG: slt:Slit_1988 putative integral membrane protein
YP_003847989.1	PFAM: GCN5-related N-acetyltransferase; KEGG: slt:Slit_1989 GCN5-related N-acetyltransferase
YP_003847990.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: app:CAP2UW1_2475 ErfK/YbiS/YcfS/YnhG family protein
YP_003847991.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mei:Msip34_0972 CMP/dCMP deaminase zinc-binding
YP_003847992.1	KEGG: rfr:Rfer_1889 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003847993.1	PFAM: CheC domain protein; KEGG: rfr:Rfer_1888 CheC, inhibitor of MCP methylation
YP_003847994.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: rfr:Rfer_1887 diguanylate cyclase; SMART: GGDEF domain containing protein; PAS domain containing protein
YP_003847995.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dar:Daro_1223 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003847996.1	KEGG: slt:Slit_1994 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc
YP_003847997.1	PFAM: Methionine sulfoxide reductase B; manually curated; KEGG: slt:Slit_1996 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase
YP_003847998.1	KEGG: slt:Slit_1997 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A
YP_003847999.1	PFAM: YCII-related; KEGG: mei:Msip34_0916 YCII-related
YP_003848000.1	PFAM: BolA family protein; KEGG: nmu:Nmul_A2113 BolA-like protein
YP_003848001.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: slt:Slit_1999 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_003848002.1	PFAM: protein of unknown function DUF847; Peptidoglycan binding domain; KEGG: ttu:TERTU_3990 N-acetylmuramidase
YP_003848003.1	KEGG: ttu:TERTU_3991 hypothetical protein
YP_003848004.1	KEGG: slt:Slit_2005 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein
YP_003848005.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: slt:Slit_0336 UBA/ThiF-type NAD/FAD binding protein
YP_003848006.1	TIGRFAM: PAS sensor protein; PFAM: CHASE domain protein; PAS fold domain protein; KEGG: sde:Sde_3211 bacteriophytochrome-like protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_003848007.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; GAF domain protein; Hpt domain protein; KEGG: sse:Ssed_2865 signal transduction histidine kinase-like protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; Hpt domain protein; GAF domain protein
YP_003848008.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003848009.1	KEGG: pat:Patl_2248 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region
YP_003848010.1	KEGG: alv:Alvin_1370 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003848011.1	KEGG: rfr:Rfer_3669 nucleic acid binding, OB-fold, tRNA/helicase-type
YP_003848012.1	KEGG: rcu:RCOM_2101450 DNA polymerase III epsilon subunit, putative; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_003848013.1	PFAM: pseudouridine synthase; KEGG: slt:Slit_0969 pseudouridine synthase
YP_003848014.1	TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: mag:amb0607 monomeric isocitrate dehydrogenase; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type
YP_003848015.1	KEGG: slt:Slit_0967 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_003848016.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: slt:Slit_0966 ATP-dependent Clp protease adaptor protein ClpS
YP_003848017.1	TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: slt:Slit_0965 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: AAA ATPase
YP_003848018.1	KEGG: slt:Slit_0964 glutamate--tRNA ligase; manually curated; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_003848019.1	KEGG: slt:Slit_1063 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase
YP_003848020.1	TIGRFAM: dihydropteroate synthase; KEGG: slt:Slit_1062 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_003848021.1	SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: slt:Slit_1061 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein
YP_003848022.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: slt:Slit_1060 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_003848023.1	PFAM: protein of unknown function UPF0044; KEGG: slt:Slit_1059 protein of unknown function UPF0044
YP_003848024.1	KEGG: slt:Slit_1058 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein
YP_003848025.1	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: slt:Slit_1057 carbamoyl-phosphate synthase, large subunit; SMART: MGS domain protein
YP_003848026.1	KEGG: slt:Slit_1056 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I
YP_003848027.1	PFAM: protein of unknown function DUF204; KEGG: slt:Slit_1055 protein of unknown function DUF204
YP_003848028.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; CHASE domain protein; MASE1 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: app:CAP2UW1_2563 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein
YP_003848029.1	KEGG: app:CAP2UW1_2561 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003848030.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; response regulator receiver; KEGG: app:CAP2UW1_2559 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver
YP_003848031.1	PFAM: PsiF repeat-containing protein; KEGG: ppf:Pput_4729 PsiF repeat-containing protein
YP_003848032.1	PFAM: protein of unknown function DUF155; KEGG: rcu:RCOM_1959580 Sporulation protein RMD1, putative
YP_003848033.1	KEGG: dar:Daro_3870 SNF2-related:helicase, C-terminal:SWIM Zn-finger; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_003848034.1	PFAM: Serine/threonine-protein kinase-like domain; leucine-rich repeat-containing protein; KEGG: dar:Daro_1854 serine/threonine protein kinase
YP_003848035.1	PFAM: glutamine amidotransferase class-I; KEGG: slt:Slit_0709 glutamine amidotransferase class-I
YP_003848036.1	KEGG: slt:Slit_0707 protein of unknown function DUF198; PFAM: protein of unknown function DUF198
YP_003848037.1	TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; dehydrogenase E1 component; KEGG: slt:Slit_0706 deoxyxylulose-5-phosphate synthase; SMART: Transketolase central region
YP_003848038.1	PFAM: Polyprenyl synthetase; KEGG: slt:Slit_0705 polyprenyl synthetase
YP_003848039.1	KEGG: slt:Slit_0704 exodeoxyribonuclease VII, small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit
YP_003848040.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: slt:Slit_0703 Rieske (2Fe-2S) iron-sulfur domain protein
YP_003848041.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: slt:Slit_0702 protein of unknown function DUF6 transmembrane
YP_003848042.1	KEGG: slt:Slit_0701 hypothetical protein
YP_003848043.1	PFAM: CcdB protein; KEGG: gur:Gura_1251 hypothetical protein
YP_003848044.1	KEGG: lif:LinJ24.0760 pre-mRNA splicing factor
YP_003848045.1	KEGG: mmb:Mmol_0376 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33
YP_003848046.1	KEGG: app:CAP2UW1_2771 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28
YP_003848047.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: Mg2 transporter protein CorA family protein
YP_003848048.1	TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; KEGG: slt:Slit_1067 phosphate ABC transporter, periplasmic phosphate-binding protein
YP_003848049.1	KEGG: slt:Slit_1066 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component
YP_003848050.1	KEGG: slt:Slit_1065 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component
YP_003848051.1	TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: slt:Slit_1064 phosphate ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_003848052.1	KEGG: rcu:RCOM_2063810 hypothetical protein
YP_003848053.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: dar:Daro_4142 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAC repeat-containing protein; PAS domain containing protein
YP_003848054.1	manually curated; KEGG: pol:Bpro_4821 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase
YP_003848055.1	KEGG: azo:azo3686 response regulator; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region
YP_003848056.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: slt:Slit_1298 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein
YP_003848057.1	PFAM: SNARE associated Golgi protein; KEGG: slt:Slit_0963 SNARE associated Golgi protein-related protein
YP_003848058.1	KEGG: slt:Slit_0962 protein-export membrane protein SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein
YP_003848059.1	KEGG: slt:Slit_0961 protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein
YP_003848060.1	KEGG: slt:Slit_0960 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein
YP_003848061.1	TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: slt:Slit_0959 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase
YP_003848062.1	KEGG: slt:Slit_0958 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein
YP_003848063.1	KEGG: mei:Msip34_1569 hypothetical protein
YP_003848064.1	KEGG: rso:RSc2280 signal peptide protein
YP_003848065.1	PFAM: NUDIX hydrolase; KEGG: slt:Slit_0955 NUDIX hydrolase
YP_003848066.1	TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: slt:Slit_0954 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_003848067.1	KEGG: slt:Slit_0953 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain-containing protein
YP_003848068.1	PFAM: protein of unknown function DUF1615; KEGG: dar:Daro_4181 hypothetical protein
YP_003848069.1	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: slt:Slit_0751 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein
YP_003848070.1	TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: slt:Slit_0750 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase
YP_003848071.1	PFAM: PEGA domain protein; KEGG: slt:Slit_0749 PEGA domain protein
YP_003848072.1	KEGG: slt:Slit_0748 CBS domain containing membrane protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_003848073.1	PFAM: NUDIX hydrolase; KEGG: slt:Slit_0747 NUDIX hydrolase
YP_003848074.1	manually curated; TIGRFAM: prolyl-tRNA synthetase; KEGG: tbd:Tbd_2112 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein
YP_003848075.1	PFAM: Lytic transglycosylase catalytic; KEGG: slt:Slit_0745 lytic transglycosylase catalytic
YP_003848076.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tbd:Tbd_2118 thioredoxin
YP_003848077.1	PFAM: uncharacterized protein family UPF0114; KEGG: slt:Slit_0743 hypothetical protein
YP_003848078.1	KEGG: app:CAP2UW1_0623 sporulation domain protein; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_003848079.1	PFAM: type II and III secretion system protein; KEGG: dar:Daro_3405 type II and III secretion system protein
YP_003848080.1	KEGG: app:CAP2UW1_0625 tetratricopeptide TPR_2 repeat protein
YP_003848081.1	KEGG: slt:Slit_0685 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase
YP_003848082.1	PFAM: Type II secretion system F domain; KEGG: type II secretion system F domain protein
YP_003848083.1	KEGG: dar:Daro_3409 hypothetical protein
YP_003848084.1	KEGG: mfa:Mfla_0081 hypothetical protein
YP_003848085.1	KEGG: app:CAP2UW1_0630 hypothetical protein
YP_003848086.1	KEGG: tmz:Tmz1t_0883 hypothetical protein
YP_003848087.1	KEGG: mmb:Mmol_0250 hypothetical protein
YP_003848088.1	KEGG: dap:Dacet_0344 two component transcriptional regulator, fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver
YP_003848089.1	SMART: ATP-binding region ATPase domain protein; KEGG: tcx:Tcr_0471 ATP-binding region, ATPase-like
YP_003848090.1	KEGG: tbd:Tbd_0540 hypothetical protein
YP_003848091.1	KEGG: sde:Sde_1352 hypothetical protein
YP_003848092.1	PFAM: transposase IS200-family protein; KEGG: hch:HCH_01378 transposase
YP_003848093.1	SMART: Cysteinyl-tRNA synthetase class Ia DALR; TIGRFAM: cysteinyl-tRNA synthetase; KEGG: slt:Slit_0675 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR
YP_003848094.1	KEGG: slt:Slit_0674 transmembrane protein
YP_003848095.1	KEGG: slt:Slit_0673 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain
YP_003848096.1	PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: slt:Slit_0672 TPR repeat-containing protein
YP_003848097.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: slt:Slit_0671 ErfK/YbiS/YcfS/YnhG family protein
YP_003848098.1	KEGG: slt:Slit_0670 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type
YP_003848099.1	TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; KEGG: slt:Slit_0669 UDP-2,3-diacylglucosamine hydrolase
YP_003848100.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: rfr:Rfer_2480 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003848101.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; GGDEF domain containing protein; MHYT domain protein; KEGG: slt:Slit_2024 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003848102.1	PFAM: metallophosphoesterase; KEGG: dar:Daro_3548 metallophosphoesterase
YP_003848103.1	PFAM: glycosyl transferase group 1; KEGG: mei:Msip34_1864 glycosyl transferase group 1
YP_003848104.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003848105.1	KEGG: ago:AGOS_AER301C AER301Cp
YP_003848106.1	KEGG: slt:Slit_0658 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A
YP_003848107.1	TIGRFAM: thiamine-monophosphate kinase; KEGG: slt:Slit_0657 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein
YP_003848108.1	KEGG: slt:Slit_0656 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44
YP_003848109.1	KEGG: slt:Slit_0655 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase
YP_003848110.1	KEGG: slt:Slit_0654 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II
YP_003848111.1	TIGRFAM: riboflavin synthase, alpha subunit; KEGG: slt:Slit_0653 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein
YP_003848112.1	TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: slt:Slit_0652 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding
YP_003848113.1	PFAM: ATP-cone domain protein; KEGG: slt:Slit_0651 ATP-cone domain protein
YP_003848114.1	KEGG: slt:Slit_0650 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase
YP_003848115.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: slt:Slit_1582 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003848116.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; GAF domain protein; KEGG: mei:Msip34_2729 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein
YP_003848117.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: slt:Slit_2378 peptidase U62 modulator of DNA gyrase
YP_003848118.1	PFAM: protein of unknown function DUF615; KEGG: slt:Slit_2379 protein of unknown function DUF615
YP_003848119.1	KEGG: alv:Alvin_2805 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003848120.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: slt:Slit_2381 putative PAS/PAC sensor protein; SMART: PAC repeat-containing protein; PAS domain containing protein
YP_003848121.1	KEGG: slt:Slit_2382 carboxylesterase; PFAM: phospholipase/Carboxylesterase
YP_003848122.1	KEGG: slt:Slit_2528 hypothetical protein
YP_003848123.1	KEGG: slt:Slit_2530 hypothetical protein
YP_003848124.1	PFAM: ferric-uptake regulator; KEGG: slt:Slit_2531 ferric uptake regulator, Fur family
YP_003848125.1	TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: slt:Slit_2384 leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_003848126.1	PFAM: Arginine-tRNA-protein transferase domain protein; KEGG: slt:Slit_2385 arginyltransferase
YP_003848127.1	KEGG: slt:Slit_2386 hypothetical protein
YP_003848128.1	TIGRFAM: dihydroorotate dehydrogenase; KEGG: slt:Slit_2387 dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase
YP_003848129.1	KEGG: slt:Slit_2391 electron transport complex, RnfABCDGE type, A subunit; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit
YP_003848130.1	KEGG: lhk:LHK_01223 RnfB2; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein
YP_003848131.1	KEGG: slt:Slit_2393 electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain
YP_003848132.1	KEGG: slt:Slit_2394 electron transport complex, RnfABCDGE type, D subunit; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein
YP_003848133.1	TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: slt:Slit_2395 electron transport complex, RnfABCDGE type, G subunit; SMART: FMN-binding domain protein
YP_003848134.1	KEGG: slt:Slit_2396 electron transport complex, RnfABCDGE type, E subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit
YP_003848135.1	SMART: HhH-GPD family protein; Helix-hairpin-helix DNA-binding class 1; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: psp:PSPPH_1376 endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif
YP_003848136.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; PAS fold domain protein; KEGG: diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS domain containing protein; PAC repeat-containing protein
YP_003848137.1	KEGG: rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_003848138.1	PFAM: Domain of unknown function DUF1841; KEGG: slt:Slit_2398 domain of unknown function DUF1841
YP_003848139.1	TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: slt:Slit_0943 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_003848140.1	KEGG: slt:Slit_0942 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein
YP_003848141.1	PFAM: Protein of unknown function DUF3108; KEGG: slt:Slit_0941 hypothetical protein
YP_003848142.1	KEGG: slt:Slit_0940 hypothetical protein
YP_003848143.1	PFAM: Fmu (Sun) domain protein; KEGG: slt:Slit_0939 Fmu (Sun) domain protein
YP_003848144.1	KEGG: slt:Slit_2544 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein
YP_003848145.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: slt:Slit_2559 NADH ubiquinone oxidoreductase 20 kDa subunit
YP_003848146.1	PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: slt:Slit_2560 NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_003848147.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: slt:Slit_2561 NADH/ubiquinone/plastoquinone (complex I)
YP_003848148.1	KEGG: slt:Slit_2562 hydrogenase 4 membrane component
YP_003848149.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: slt:Slit_2563 formate hydrogenlyase subunit 4
YP_003848150.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: slt:Slit_2564 NADH/ubiquinone/plastoquinone (complex I)
YP_003848151.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pnu:Pnuc_1378 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003848152.1	PFAM: Ferritin Dps family protein; KEGG: slt:Slit_0305 ferritin Dps family protein
YP_003848153.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pmy:Pmen_4403 rubredoxin-type Fe(Cys)4 protein
YP_003848154.1	PFAM: Rubrerythrin; KEGG: rfr:Rfer_0090 rubrerythrin
YP_003848155.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: slt:Slit_0301 transcriptional regulator, LysR family
YP_003848156.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: nhl:Nhal_1638 hypothetical protein
YP_003848157.1	KEGG: membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein
YP_003848158.1	KEGG: azo:azo1231 cytochrome bd type terminal oxidase,subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II
YP_003848159.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: slt:Slit_1151 cytochrome bd ubiquinol oxidase subunit I
YP_003848160.1	KEGG: slt:Slit_0997 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter
YP_003848161.1	TIGRFAM: arsenite-activated ATPase ArsA; KEGG: mfa:Mfla_1491 arsenite-activated ATPase (ArsA); SMART: AAA ATPase
YP_003848162.1	PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: dar:Daro_2638 arsenical resistance operon trans-acting repressor ArsD
YP_003848163.1	KEGG: slt:Slit_0996 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_003848164.1	KEGG: bmj:BMULJ_06256 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_003848165.1	KEGG: rno:296090 spectrin, beta, non-erythrocytic 5
YP_003848166.1	KEGG: sil:SPO1236 hypothetical protein
YP_003848167.1	KEGG: eba:p2A244 DNA repair protein; PFAM: UMUC domain protein DNA-repair protein
YP_003848168.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: hna:Hneap_0885 peptidase S24/S26A/S26B, conserved region
YP_003848169.1	PFAM: protein of unknown function DUF159; KEGG: mei:Msip34_1604 protein of unknown function DUF159
YP_003848170.1	SMART: AAA ATPase; KEGG: maq:Maqu_2305 AAA ATPase
YP_003848171.1	KEGG: maq:Maqu_2306 hypothetical protein
YP_003848172.1	KEGG: xac:XAC2901 hypothetical protein
YP_003848173.1	KEGG: sbp:Sbal223_0590 hypothetical protein
YP_003848174.1	KEGG: hna:Hneap_1226 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase
YP_003848175.1	PFAM: transposase IS3/IS911 family protein; KEGG: rpf:Rpic12D_2977 transposase IS3/IS911 family protein
YP_003848176.1	PFAM: IS66 Orf2 family protein; KEGG: hna:Hneap_2256 IS66 Orf2 family protein
YP_003848177.1	KEGG: eba:ebA5523 transposase
YP_003848178.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: cyt:cce_0691 putative 4-oxalocrotonate tautomerase
YP_003848179.1	KEGG: pcb:PC301038.00.0 hypothetical protein
YP_003848180.1	KEGG: vsp:VS_II1119 hypothetical protein
YP_003848181.1	SMART: AAA ATPase; KEGG: maq:Maqu_2305 AAA ATPase
YP_003848182.1	KEGG: maq:Maqu_2306 hypothetical protein
YP_003848183.1	KEGG: sbp:Sbal223_0591 hypothetical protein
YP_003848184.1	KEGG: sbp:Sbal223_0590 hypothetical protein
YP_003848185.1	PFAM: integrase family protein; KEGG: xac:XAC2903 hypothetical protein
YP_003848186.1	PFAM: integrase family protein; KEGG: sbp:Sbal223_0588 integrase family protein
YP_003848187.1	KEGG: slt:Slit_0800 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n
YP_003848188.1	PFAM: protein of unknown function UPF0061; KEGG: mfa:Mfla_1788 hypothetical protein
YP_003848189.1	KEGG: bav:BAV2623 cellulose acetylase subunit
YP_003848190.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: pfs:PFLU0307 cell morphology-related protein
YP_003848191.1	KEGG: bav:BAV2625 cellulose acetylase subunit
YP_003848192.1	KEGG: xcv:XCV3640 putative cellulose synthase operon protein C
YP_003848193.1	KEGG: cellulase; PFAM: glycoside hydrolase family 8
YP_003848194.1	PFAM: Cellulose synthase BcsB; KEGG: bph:Bphy_3255 cellulose synthase regulator protein
YP_003848195.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003848196.1	KEGG: bpy:Bphyt_5835 cellulose synthase operon protein YhjQ; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cellulose synthase operon protein YhjQ
YP_003848197.1	KEGG: bgl:bglu_2g21270 hypothetical protein
YP_003848198.1	KEGG: bph:Bphy_3259 hypothetical protein
YP_003848199.1	PFAM: GrpE protein; KEGG: slt:Slit_2129 GrpE protein
YP_003848200.1	KEGG: slt:Slit_2130 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70
YP_003848201.1	TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: slt:Slit_2131 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein
YP_003848202.1	PFAM: K potassium transporter; KEGG: slt:Slit_2390 potassium transporter
YP_003848203.1	KEGG: slt:Slit_2389 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein
YP_003848204.1	manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: slt:Slit_2388 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003848205.1	KEGG: slt:Slit_2312 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like
YP_003848206.1	PFAM: UvrD/REP helicase; KEGG: slt:Slit_0712 exodeoxyribonuclease V
YP_003848207.1	KEGG: slt:Slit_0711 hypothetical protein
YP_003848208.1	KEGG: slt:Slit_0710 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_003848209.1	KEGG: slt:Slit_1011 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein
YP_003848210.1	TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; KEGG: slt:Slit_1010 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase
YP_003848211.1	KEGG: slt:Slit_1009 ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21
YP_003848212.1	KEGG: slt:Slit_1008 ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27
YP_003848213.1	KEGG: slt:Slit_1007 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related
YP_003848214.1	TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: slt:Slit_1006 glutamate 5-kinase; SMART: PUA domain containing protein
YP_003848215.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; KEGG: tbd:Tbd_1953 diguanylate cyclase; SMART: GGDEF domain containing protein; CBS domain containing protein
YP_003848216.1	KEGG: slt:Slit_0661 hypothetical protein
YP_003848217.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: slt:Slit_0983 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
YP_003848218.1	KEGG: slt:Slit_0982 ABC transporter related protein; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_003848219.1	KEGG: mmb:Mmol_2055 hypothetical protein
YP_003848220.1	SMART: phospholipase D/Transphosphatidylase; KEGG: slt:Slit_0979 phospholipase D/transphosphatidylase
YP_003848221.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: slt:Slit_0978 endonuclease/exonuclease/phosphatase
YP_003848222.1	PFAM: Protein of unknown function DUF2242; KEGG: xal:XALc_0822 hypothetical protein
YP_003848223.1	TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: slt:Slit_0977 quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A
YP_003848224.1	PFAM: NUDIX hydrolase; KEGG: slt:Slit_0976 NUDIX hydrolase
YP_003848225.1	PFAM: Barstar (barnase inhibitor); KEGG: slt:Slit_0975 hypothetical protein
YP_003848226.1	PFAM: guanine-specific ribonuclease N1 and T1; KEGG: slt:Slit_0974 guanine-specific ribonuclease N1 and T1
YP_003848227.1	KEGG: slt:Slit_0973 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type
YP_003848228.1	PFAM: protein of unknown function DUF502; KEGG: slt:Slit_0972 protein of unknown function DUF502
YP_003848229.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: slt:Slit_0971 regulatory protein, FmdB family; SMART: Putative regulatory protein FmdB
YP_003848230.1	KEGG: mei:Msip34_1135 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_003848231.1	KEGG: cps:CPS_2174 hypothetical protein
YP_003848233.1	KEGG: tbd:Tbd_1443 hypothetical protein
YP_003848234.1	KEGG: bte:BTH_II1270 hypothetical protein
YP_003848235.1	KEGG: mca:MCA2400 nitric-oxide reductase, B subunit, putative; PFAM: cytochrome c oxidase subunit I
YP_003848236.1	PFAM: cytochrome c class I; KEGG: mca:MCA2401 hypothetical protein
YP_003848237.1	KEGG: nis:NIS_1797 hypothetical protein
YP_003848238.1	KEGG: eba:ebA2878 transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074
YP_003848239.1	PFAM: HPP family protein; KEGG: tcx:Tcr_1929 HPP
YP_003848240.1	KEGG: tbd:Tbd_2161 hypothetical protein
YP_003848241.1	KEGG: pna:Pnap_1329 hypothetical protein
YP_003848242.1	manually curated; KEGG: rfr:Rfer_4123 hypothetical protein
YP_003848243.1	PFAM: electron transport protein SCO1/SenC; KEGG: eba:ebA2886 hypothetical protein
YP_003848244.1	PFAM: cytochrome c oxidase subunit I; KEGG: eba:ebA3666 cytochrome c oxidase, subunit I
YP_003848245.1	PFAM: cytochrome c oxidase subunit II; KEGG: eba:ebA3665 cytochrome-c oxidase subunit II
YP_003848246.1	KEGG: hna:Hneap_0930 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074
YP_003848247.1	KEGG: slt:Slit_2913 type I secretion outer membrane protein, TolC family; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein
YP_003848248.1	KEGG: nha:Nham_1934 hypothetical protein
YP_003848249.1	PFAM: cytochrome c class II; KEGG: tbd:Tbd_1357 hypothetical protein
YP_003848250.1	PFAM: regulatory protein TetR; KEGG: slt:Slit_1136 transcriptional regulator, TetR family
YP_003848251.1	KEGG: slt:Slit_1135 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003848252.1	PFAM: protein of unknown function DUF214; KEGG: slt:Slit_1134 protein of unknown function DUF214
YP_003848253.1	KEGG: slt:Slit_1133 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003848254.1	PFAM: integrase family protein; KEGG: integrase family protein
YP_003848255.1	KEGG: slt:Slit_2790 addiction module antidote protein; TIGRFAM: addiction module antidote protein; PFAM: helix-turn-helix domain protein
YP_003848256.1	KEGG: slt:Slit_2789 addiction module killer protein; TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891
YP_003848257.1	PFAM: globin; KEGG: slt:Slit_1261 globin
YP_003848258.1	KEGG: phospholipase A(2); PFAM: phospholipase A1
YP_003848259.1	KEGG: slt:Slit_0334 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX
YP_003848260.1	PFAM: Protein of unknown function DUF3683; Protein of unknown function DUF3400; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: slt:Slit_0333 FAD linked oxidase domain protein
YP_003848261.1	KEGG: slt:Slit_0332 hypothetical protein
YP_003848262.1	TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: slt:Slit_0331 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003848263.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: slt:Slit_0330 two component transcriptional regulator PhoB, winged helix family; SMART: response regulator receiver; transcriptional regulator domain-containing protein
YP_003848264.1	PFAM: Na+/solute symporter; KEGG: dar:Daro_4155 Na+/solute symporter
YP_003848265.1	KEGG: slt:Slit_2731 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase
YP_003848266.1	KEGG: slt:Slit_2732 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein
YP_003848267.1	TIGRFAM: ribose 5-phosphate isomerase; KEGG: slt:Slit_2733 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase
YP_003848268.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase; KEGG: slt:Slit_1882 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
YP_003848269.1	KEGG: esa:ESA_pESA3p05475 hypothetical protein
YP_003848270.1	KEGG: rbi:RB2501_00811 hypothetical protein
YP_003848271.1	PFAM: HemY domain protein; KEGG: slt:Slit_0270 HemY domain protein
YP_003848272.1	PFAM: protein of unknown function DUF513 hemX; KEGG: slt:Slit_0269 protein of unknown function DUF513 HemX
YP_003848273.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: slt:Slit_0268 uroporphyrinogen III synthase HEM4
YP_003848274.1	KEGG: slt:Slit_0267 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase
YP_003848275.1	KEGG: slt:Slit_0266 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region
YP_003848276.1	PFAM: pentapeptide repeat protein; KEGG: cyn:Cyan7425_5254 pentapeptide repeat protein
YP_003848277.1	TIGRFAM: 2-isopropylmalate synthase; KEGG: slt:Slit_0739 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein
YP_003848278.1	KEGG: slt:Slit_2400 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003848279.1	TIGRFAM: ketol-acid reductoisomerase; KEGG: slt:Slit_2402 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase
YP_003848280.1	KEGG: slt:Slit_2403 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein
YP_003848281.1	KEGG: slt:Slit_2404 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein
YP_003848282.1	KEGG: slt:Slit_2405 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein
YP_003848283.1	PFAM: Protein of unknown function DUF3619; KEGG: slt:Slit_2406 hypothetical protein
YP_003848284.1	PFAM: Protein of unknown function DUF3106; KEGG: slt:Slit_2407 hypothetical protein
YP_003848285.1	PFAM: permease YjgP/YjgQ family protein; KEGG: slt:Slit_2408 permease YjgP/YjgQ family protein
YP_003848286.1	PFAM: permease YjgP/YjgQ family protein; KEGG: slt:Slit_2409 permease YjgP/YjgQ family protein
YP_003848287.1	KEGG: slt:Slit_2410 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein
YP_003848288.1	PFAM: DNA polymerase III chi subunit HolC; KEGG: slt:Slit_2411 DNA polymerase III chi subunit HolC
YP_003848289.1	KEGG: ppg:PputGB1_0984 hypothetical protein
YP_003848290.1	KEGG: slt:Slit_2413 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase
YP_003848291.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: slt:Slit_2321 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003848292.1	PFAM: SirA-like domain-containing protein; KEGG: slt:Slit_2414 SirA family protein
YP_003848293.1	KEGG: slt:Slit_2415 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_003848294.1	PFAM: peptidase M48 Ste24p; KEGG: slt:Slit_2417 peptidase M48 Ste24p
YP_003848295.1	PFAM: protein of unknown function UPF0153; KEGG: azl:AZL_025030 hypothetical protein
YP_003848296.1	PFAM: SEC-C motif domain protein; KEGG: azl:AZL_025040 hypothetical protein
YP_003848297.1	KEGG: slt:Slit_0260 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; LytTr DNA-binding region
YP_003848298.1	PFAM: histidine kinase internal region; KEGG: slt:Slit_0259 integral membrane sensor signal transduction histidine kinase
YP_003848299.1	KEGG: slt:Slit_0258 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase
YP_003848300.1	KEGG: dar:Daro_3683 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin
YP_003848301.1	KEGG: slt:Slit_0257 protein-(glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small
YP_003848302.1	KEGG: slt:Slit_0256 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein
YP_003848303.1	KEGG: slt:Slit_0255 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase
YP_003848304.1	PFAM: YaeQ family protein; KEGG: slt:Slit_1246 YaeQ family protein
YP_003848305.1	KEGG: mms:mma_0119 hypothetical protein
YP_003848306.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: slt:Slit_0416 cytochrome c oxidase accessory protein CcoG
YP_003848307.1	KEGG: transcriptional regulator, GntR family with aminotransferase domain; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_003848308.1	KEGG: slt:Slit_1250 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003848309.1	KEGG: tbd:Tbd_2120 GTPase; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related
YP_003848310.1	PFAM: RIO-like kinase; KEGG: tmz:Tmz1t_3148 protein of unknown function RIO1
YP_003848311.1	PFAM: methyltransferase small; KEGG: rpf:Rpic12D_3599 methyltransferase small
YP_003848312.1	KEGG: slt:Slit_1253 asparagine synthase family amidotransferase; TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase
YP_003848313.1	KEGG: slt:Slit_0539 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat
YP_003848314.1	KEGG: rcu:RCOM_1997740 Pilus biogenesis protein tapA precursor, putative
YP_003848315.1	KEGG: slt:Slit_0537 metal dependent phosphohydrolase; PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region
YP_003848316.1	KEGG: slt:Slit_0536 putative phytochrome sensor protein; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; GAF domain protein; SMART: GAF domain protein; AAA ATPase
YP_003848317.1	KEGG: slt:Slit_0534 beta-lactamase domain protein; PFAM: cyclic-AMP phosphodiesterase class-II; SMART: beta-lactamase domain protein
YP_003848318.1	KEGG: slt:Slit_0532 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein
YP_003848319.1	KEGG: slt:Slit_0531 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein
YP_003848320.1	PFAM: UspA domain-containing protein; KEGG: slt:Slit_0529 UspA domain protein
YP_003848321.1	PFAM: Integral membrane protein TerC; KEGG: slt:Slit_0528 integral membrane protein TerC
YP_003848322.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: slt:Slit_0527 succinyl-CoA synthetase, alpha subunit; SMART: CoA-binding domain protein
YP_003848323.1	TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: slt:Slit_0526 succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase
YP_003848324.1	KEGG: rru:Rru_A0564 hypothetical protein
YP_003848325.1	KEGG: slt:Slit_1038 hypothetical protein
YP_003848326.1	TIGRFAM: phosphoenolpyruvate synthase; KEGG: slt:Slit_2479 phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilizing protein; PEP-utilising protein mobile region
YP_003848327.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: slt:Slit_2488 transcriptional regulator, LysR family
YP_003848328.1	PFAM: protein of unknown function DUF299; KEGG: slt:Slit_2489 protein of unknown function DUF299
YP_003848329.1	KEGG: slt:Slit_0667 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_003848330.1	PFAM: protein of unknown function DUF45; KEGG: slt:Slit_0665 protein of unknown function DUF45
YP_003848331.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: mgm:Mmc1_2953 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; Hpt domain protein
YP_003848332.1	KEGG: mag:amb3437 hypothetical protein; PFAM: domain of unknown function DUF1745; FIST C domain; SMART: domain of unknown function DUF1745
YP_003848335.1	KEGG: mal:MAGa7200 ClpB
YP_003848338.1	KEGG: app:CAP2UW1_0652 hypothetical protein
YP_003848339.1	PFAM: plasmid recombination protein; KEGG: asa:ASA_3671 mobilization protein
YP_003848340.1	KEGG: swo:Swol_2065 ATP-dependent transcriptional regulator-like protein
YP_003848341.1	KEGG: slt:Slit_0524 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like
YP_003848342.1	PFAM: Radical SAM domain protein; KEGG: slt:Slit_0523 radical SAM domain protein
YP_003848343.1	TIGRFAM: tol-pal system protein YbgF; KEGG: slt:Slit_0522 tol-pal system protein YbgF
YP_003848344.1	KEGG: slt:Slit_0521 peptidoglycan-associated lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein
YP_003848345.1	KEGG: slt:Slit_0520 Tol-Pal system beta propeller repeat protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein
YP_003848346.1	KEGG: net:Neut_0288 proline-rich region; TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA
YP_003848347.1	KEGG: slt:Slit_0518 protein TolR; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_003848348.1	KEGG: slt:Slit_0517 protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel
YP_003848349.1	KEGG: slt:Slit_0516 tol-pal system-associated acyl-CoA thioesterase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein
YP_003848350.1	TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase RuvB domain; KEGG: slt:Slit_0515 Holliday junction DNA helicase RuvB; SMART: AAA ATPase
YP_003848351.1	KEGG: bvi:Bcep1808_2979 YecA family protein; TIGRFAM: yecA family protein; PFAM: uncharacterized protein family UPF0149 (YgfB); SEC-C motif domain protein
YP_003848352.1	TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: slt:Slit_0514 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1
YP_003848353.1	PFAM: UbiA prenyltransferase; KEGG: slt:Slit_0513 UbiA prenyltransferase
YP_003848354.1	TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: slt:Slit_0512 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC
YP_003848355.1	KEGG: slt:Slit_0511 protein of unknown function DUF28; manually curated; PFAM: protein of unknown function DUF28
YP_003848356.1	KEGG: slt:Slit_2695 cobyrinic acid ac-diamide synthase
YP_003848357.1	PFAM: Protein of unknown function DUF2721; KEGG: hypothetical protein
YP_003848358.1	KEGG: slt:Slit_0451 hypothetical protein
YP_003848359.1	PFAM: phosphate acetyl/butaryl transferase; malic protein NAD-binding; malic protein domain protein; KEGG: slt:Slit_0450 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., phosphate acetyltransferase
YP_003848360.1	TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; DEAD/DEAH box helicase domain protein; protein of unknown function DUF1605; KEGG: slt:Slit_0445 ATP-dependent helicase HrpA; SMART: helicase-associated domain protein; DEAD-like helicase ; helicase domain protein; AAA ATPase
YP_003848361.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: slt:Slit_1254 protein of unknown function DUF6 transmembrane
YP_003848362.1	PFAM: protein of unknown function DUF342; KEGG: app:CAP2UW1_3886 polymerase most-like protein contain PALM domain HD hydrolase domain and Zn-ribbon domain
YP_003848363.1	KEGG: slt:Slit_1242 putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_003848364.1	PFAM: major facilitator superfamily MFS_1; KEGG: slt:Slit_1247 major facilitator superfamily MFS_1
YP_003848365.1	KEGG: app:CAP2UW1_3934 hypothetical protein
YP_003848366.1	TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: slt:Slit_1235 aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_003848367.1	PFAM: HI0933 family protein; KEGG: mmb:Mmol_0682 HI0933 family protein
YP_003848368.1	PFAM: protein of unknown function DUF71 ATP-binding region; KEGG: slt:Slit_1231 protein of unknown function DUF71 ATP-binding region
YP_003848369.1	KEGG: slt:Slit_2018 hypothetical protein
YP_003848370.1	PFAM: plasmid stabilization system; KEGG: slt:Slit_1214 plasmid stabilization system
YP_003848371.1	KEGG: slt:Slit_1213 prevent-host-death family protein
YP_003848372.1	KEGG: cli:Clim_2468 DNA-damage-inducible protein D
YP_003848373.1	KEGG: pct:PC1_3458 hypothetical protein
YP_003848374.1	KEGG: slt:Slit_1204 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003848375.1	PFAM: Ferritin Dps family protein; KEGG: pmx:PERMA_0115 bacterioferritin (BFR) (cytochrome b-557.5)
YP_003848376.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: slt:Slit_1198 ATPase, P-type (transporting), HAD superfamily, subfamily IC; SMART: cation transporting ATPase domain protein
YP_003848377.1	KEGG: tle:Tlet_0629 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003848378.1	KEGG: slt:Slit_1388 TonB family protein; TIGRFAM: TonB family protein; PFAM: TonB domain
YP_003848379.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo1830 putative TonB-denpendent receptor
YP_003848380.1	KEGG: pmy:Pmen_4555 PepSY-associated TM helix domain-containing protein
YP_003848381.1	KEGG: aeh:Mlg_0782 cytochrome c biogenesis protein, transmembrane region
YP_003848382.1	TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: aeh:Mlg_0786 putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type
YP_003848383.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: aeh:Mlg_0785 2-hydroxyglutaryl-CoA dehydratase, D-component
YP_003848384.1	KEGG: tdn:Suden_0274 4Fe-4S ferredoxin, iron-sulfur binding
YP_003848385.1	PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: aeh:Mlg_0783 polyferredoxin-like protein
YP_003848386.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: slt:Slit_1130 TonB-dependent receptor
YP_003848387.1	PFAM: Cytochrome b/b6 domain; KEGG: azc:AZC_1822 putative hydrogenase cytochrome b-type subunit protein
YP_003848388.1	PFAM: cytochrome c class II; KEGG: lch:Lcho_3537 cytochrome c prime
YP_003848389.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003848390.1	PFAM: protein of unknown function DUF485; KEGG: glo:Glov_1398 protein of unknown function DUF485
YP_003848391.1	KEGG: slt:Slit_2503 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_003848392.1	KEGG: slt:Slit_2504 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: protein of unknown function DUF294 nucleotidyltransferase; CBS domain containing protein; cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein
YP_003848393.1	KEGG: bba:Bd2392 cell morphology protein
YP_003848394.1	KEGG: tbd:Tbd_0968 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein
YP_003848395.1	KEGG: slt:Slit_0187 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1
YP_003848396.1	KEGG: app:CAP2UW1_2275 chaperonin Cpn10; PFAM: Chaperonin Cpn10; SMART: chaperonin Cpn10
YP_003848397.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: dar:Daro_2873 2-nitropropane dioxygenase, NPD
YP_003848398.1	KEGG: slt:Slit_0184 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III
YP_003848399.1	TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: slt:Slit_0183 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C
YP_003848400.1	KEGG: slt:Slit_0181 UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein
YP_003848401.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: slt:Slit_0179 lipid A biosynthesis acyltransferase
YP_003848402.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: slt:Slit_0178 lipid A biosynthesis acyltransferase
YP_003848403.1	TIGRFAM: S-adenosylmethionine synthetase; KEGG: slt:Slit_0177 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase
YP_003848404.1	KEGG: app:CAP2UW1_4198 metal dependent phosphohydrolase; PFAM: Protein of unknown function DUF3391; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003848405.1	TIGRFAM: adenosylhomocysteinase; KEGG: slt:Slit_0176 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding
YP_003848406.1	PFAM: membrane protein of unknown function; KEGG: slt:Slit_0175 membrane protein of unknown function
YP_003848407.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: slt:Slit_0174 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_003848408.1	PFAM: peptidase U32; KEGG: slt:Slit_0173 peptidase U32
YP_003848409.1	PFAM: Cytochrome b/b6 domain; KEGG: slt:Slit_0172 cytochrome b561
YP_003848410.1	PFAM: Conserved hypothetical protein CHP00022; KEGG: slt:Slit_0171 hypothetical protein
YP_003848411.1	KEGG: slt:Slit_0313 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP
YP_003848412.1	TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: slt:Slit_0311 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein
YP_003848413.1	KEGG: neu:NE1837 putative chorismate--pyruvate lyase; PFAM: Chorismate lyase
YP_003848414.1	KEGG: slt:Slit_0310 4-hydroxybenzoate polyprenyl transferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase
YP_003848415.1	PFAM: Methyltransferase type 11; KEGG: slt:Slit_0300 methyltransferase type 11
YP_003848416.1	PFAM: Bestrophin-like; KEGG: ctt:CtCNB1_0870 hypothetical protein
YP_003848417.1	KEGG: slt:Slit_0296 coproporphyrinogen oxidase; PFAM: coproporphyrinogen III oxidase
YP_003848418.1	PFAM: SUA5/yciO/yrdC domain; KEGG: slt:Slit_0295 SUA5/YciO/YrdC domain protein
YP_003848419.1	TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: slt:Slit_0294 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain
YP_003848420.1	SMART: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: slt:Slit_0293 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein
YP_003848421.1	PFAM: helix-turn-helix Fis-type; KEGG: slt:Slit_0292 transcriptional regulator, fis family
YP_003848422.1	KEGG: slt:Slit_0291 TIM-barrel protein, nifR3 family; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS
YP_003848423.1	KEGG: slt:Slit_0290 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding
YP_003848424.1	PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: slt:Slit_0289 disulfide bond isomerase, DsbC/G-like protein
YP_003848425.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: har:HEAR2418 hypothetical protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_003848426.1	PFAM: MltA domain protein; 3D domain-containing protein; KEGG: slt:Slit_0284 MltA domain protein
YP_003848427.1	PFAM: ApaG domain protein; KEGG: slt:Slit_0283 ApaG domain protein
YP_003848428.1	manually curated; TIGRFAM: threonine dehydratase, biosynthetic; KEGG: slt:Slit_2743 threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain-containing protein
YP_003848429.1	KEGG: slt:Slit_2745 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_003848430.1	KEGG: slt:Slit_2746 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein
YP_003848431.1	PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: slt:Slit_2747 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
YP_003848432.1	TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: slt:Slit_2748 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase
YP_003848433.1	KEGG: slt:Slit_2749 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein
YP_003848434.1	PFAM: protein of unknown function DUF163; KEGG: slt:Slit_2750 protein of unknown function DUF163
YP_003848435.1	KEGG: slt:Slit_2751 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein
YP_003848436.1	KEGG: slt:Slit_2752 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein
YP_003848437.1	KEGG: mgm:Mmc1_3518 hypothetical protein
YP_003848438.1	PFAM: protein of unknown function DUF167; KEGG: slt:Slit_2755 protein of unknown function DUF167
YP_003848439.1	PFAM: protein of unknown function YGGT; KEGG: slt:Slit_2756 protein of unknown function YGGT
YP_003848440.1	TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: slt:Slit_2757 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_003848441.1	PFAM: alanine racemase domain protein; KEGG: slt:Slit_2758 alanine racemase domain protein
YP_003848442.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: slt:Slit_2759 twitching motility protein; SMART: AAA ATPase
YP_003848443.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: slt:Slit_2760 twitching motility protein; SMART: AAA ATPase
YP_003848444.1	SMART: CoA-binding domain protein; KEGG: slt:Slit_0149 CoA-binding domain protein
YP_003848445.1	TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: gur:Gura_3518 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase
YP_003848446.1	TIGRFAM: diaminopimelate epimerase; KEGG: slt:Slit_0148 diaminopimelate epimerase; PFAM: diaminopimelate epimerase
YP_003848447.1	PFAM: protein of unknown function DUF484; KEGG: slt:Slit_0147 putative phytochrome sensor protein
YP_003848448.1	KEGG: slt:Slit_0146 tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein
YP_003848449.1	SMART: PUA domain containing protein; KEGG: slt:Slit_0145 protein of unknown function Met10
YP_003848450.1	PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: slt:Slit_0273 oxidoreductase FAD/NAD(P)-binding domain protein
YP_003848451.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: slt:Slit_0274 NAD-dependent epimerase/dehydratase
YP_003848452.1	KEGG: dar:Daro_1590 putative aminopeptidase 2; PFAM: peptidase M18 aminopeptidase I
YP_003848453.1	KEGG: slt:Slit_0708 ATP-binding region ATPase domain protein; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_003848454.1	KEGG: mfa:Mfla_0507 glutathione S-transferase-like protein; manually curated; PFAM: Glutathione S-transferase domain
YP_003848455.1	TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: slt:Slit_0276 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like
YP_003848456.1	KEGG: slt:Slit_0277 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I
YP_003848457.1	PFAM: FAD dependent oxidoreductase; KEGG: FAD dependent oxidoreductase
YP_003848458.1	TIGRFAM: anthranilate synthase component I; KEGG: slt:Slit_0278 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein
YP_003848459.1	KEGG: slt:Slit_0279 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_003848460.1	KEGG: lch:Lcho_0352 hypothetical protein
YP_003848461.1	TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: slt:Slit_0280 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase
YP_003848462.1	KEGG: slt:Slit_2742 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_003848463.1	TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: slt:Slit_2741 signal recognition particle protein; SMART: AAA ATPase
YP_003848464.1	PFAM: cytochrome c assembly protein; KEGG: slt:Slit_2740 cytochrome c assembly protein
YP_003848465.1	KEGG: slt:Slit_2739 ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16
YP_003848466.1	manually curated; TIGRFAM: 16S rRNA processing protein RimM; KEGG: slt:Slit_2738 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein
YP_003848467.1	PFAM: tRNA (guanine-N1-)-methyltransferase; manually curated; KEGG: slt:Slit_2737 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_003848468.1	KEGG: rfr:Rfer_1405 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19
YP_003848469.1	KEGG: bgl:bglu_3p0820 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase
YP_003848470.1	PFAM: Integrase catalytic region; KEGG: maq:Maqu_1224 integrase catalytic subunit
YP_003848471.1	KEGG: fgr:FG07974.1 hypothetical protein
YP_003848472.1	PFAM: Protein of unknown function DUF2946; KEGG: slt:Slit_1862 hypothetical protein
YP_003848473.1	PFAM: outer membrane efflux protein; KEGG: slt:Slit_1863 outer membrane efflux protein
YP_003848474.1	KEGG: slt:Slit_1864 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: Copper binding periplasmic protein CusF
YP_003848475.1	KEGG: ajs:Ajs_2703 CzcA family heavy metal efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_003848476.1	PFAM: cation efflux protein; KEGG: slt:Slit_0871 cation efflux protein
YP_003848477.1	PFAM: protein of unknown function DUF411; KEGG: rcu:RCOM_1952370 hypothetical protein
YP_003848478.1	KEGG: rcu:RCOM_2011350 hypothetical protein
YP_003848479.1	KEGG: dar:Daro_2273 hypothetical protein
YP_003848480.1	KEGG: dar:Daro_2274 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003848481.1	KEGG: mta:Moth_1992 hypothetical protein
YP_003848482.1	KEGG: pol:Bpro_1181 hypothetical protein
YP_003848483.1	TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; YHS domain-containing protein; Haloacid dehalogenase domain protein hydrolase; KEGG: slt:Slit_1868 copper-translocating P-type ATPase; SMART: TRASH domain-containing protein
YP_003848484.1	PFAM: Protein of unknown function DUF2933; KEGG: bvi:Bcep1808_7279 hypothetical protein
YP_003848485.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rfr:Rfer_0419 hypothetical protein
YP_003848486.1	PFAM: YHS domain-containing protein; KEGG: sde:Sde_1941 hypothetical protein
YP_003848487.1	KEGG: slt:Slit_1593 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; SMART: response regulator receiver
YP_003848488.1	TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; KEGG: tbd:Tbd_1289 multi-sensor signal transduction histidine kinase; SMART: PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein
YP_003848489.1	KEGG: rcu:RCOM_0025810 hypothetical protein; PFAM: chemotaxis sensory transducer; CCR4-Not complex component, Not1; SMART: chemotaxis sensory transducer
YP_003848490.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; KEGG: dar:Daro_0729 PAS; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein
YP_003848491.1	KEGG: slt:Slit_2735 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_003848492.1	KEGG: slt:Slit_2734 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein
YP_003848493.1	PFAM: VanZ family protein; KEGG: slt:Slit_2821 VanZ family protein
YP_003848494.1	KEGG: slt:Slit_2820 putative ferredoxin 2fe-2s protein
YP_003848495.1	PFAM: alpha/beta hydrolase fold; KEGG: slt:Slit_2819 esterase/lipase/thioesterase family protein
YP_003848496.1	KEGG: slt:Slit_2818 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003848497.1	PFAM: ABC-2 type transporter; KEGG: slt:Slit_2816 ABC-2 type transporter, NodJ family
YP_003848498.1	PFAM: transposase IS4 family protein; KEGG: ppd:Ppro_0140 transposase, IS4 family protein
YP_003848499.1	TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: maq:Maqu_4033 phosphonates metabolism transcriptional regulator PhnF; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH
YP_003848500.1	KEGG: tbd:Tbd_2300 phosphonate-binding periplasmic protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; PFAM: extracellular solute-binding protein family 3
YP_003848501.1	TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: tbd:Tbd_2299 ABC phosphate/phosphonate transport system ATPase; SMART: AAA ATPase
YP_003848502.1	KEGG: tbd:Tbd_2298 ABC phosphonate permease; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_003848503.1	KEGG: tbd:Tbd_2297 ABC phosphonate permease; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_003848504.1	KEGG: tbd:Tbd_2296 hypothetical protein; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG
YP_003848505.1	KEGG: maq:Maqu_4148 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism
YP_003848506.1	PFAM: phosphonate metabolism; KEGG: maq:Maqu_4039 phosphonate metabolism
YP_003848507.1	PFAM: phosphonate metabolism PhnJ; KEGG: tcx:Tcr_2085 phosphonate metabolism PhnJ
YP_003848508.1	KEGG: tbd:Tbd_2292 ABC phosphonate transport system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003848509.1	TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: tbd:Tbd_2291 ABC phosphonate transport system ATPase; SMART: AAA ATPase
YP_003848510.1	PFAM: Amidohydrolase 3; KEGG: mpt:Mpe_B0466 phosphonate metabolism protein
YP_003848511.1	KEGG: dba:Dbac_0820 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region
YP_003848512.1	KEGG: mpt:Mpe_B0467 carbon-phosphorus lyase complex accessory protein; TIGRFAM: phosphonate metabolism protein PhnP; SMART: beta-lactamase domain protein
YP_003848513.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_B0468 hypothetical protein
YP_003848514.1	KEGG: mfa:Mfla_1395 putative phage repressor
YP_003848515.1	KEGG: bja:bll4271 hypothetical protein
YP_003848516.1	KEGG: bja:bll4270 hypothetical protein
YP_003848517.1	PFAM: integrase family protein; KEGG: bja:bll4269 hypothetical protein
YP_003848518.1	KEGG: bja:bll4268 hypothetical protein
YP_003848519.1	KEGG: bja:bll4267 hypothetical protein
YP_003848520.1	KEGG: bja:bll4266 hypothetical protein
YP_003848521.1	KEGG: app:CAP2UW1_3577 ABC-2 type transporter, NodJ family; TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter
YP_003848522.1	KEGG: neu:NE1379 hypothetical protein
YP_003848523.1	KEGG: neu:NE1380 hypothetical protein
YP_003848524.1	KEGG: lhk:LHK_00421 hypothetical protein
YP_003848525.1	PFAM: restriction modification system DNA specificity domain; KEGG: eba:p2A50 type I restriction-modification system (specificity subunit)
YP_003848526.1	PFAM: N-6 DNA methylase; KEGG: eba:p2A48 type I restriction-modification system (specificity subunit)
YP_003848527.1	PFAM: type III restriction protein res subunit; helicase domain protein; KEGG: eba:p2A45 type I restriction-modification system (restriction subunit); SMART: DEAD-like helicase ; helicase domain protein
YP_003848528.1	KEGG: sgo:SGO_2086 hypothetical protein
YP_003848529.1	KEGG: pbe:PB000443.02.0 hypothetical protein
YP_003848530.1	KEGG: eba:p1B240 hypothetical protein
YP_003848531.1	KEGG: mes:Meso_4578 hypothetical protein
YP_003848532.1	KEGG: rha:RHA1_ro08877 acetate--CoA ligase
YP_003848534.1	PFAM: Hsp33 protein; KEGG: slt:Slit_1325 HSP33 protein
YP_003848535.1	PFAM: dUTPase; KEGG: slt:Slit_2797 dUTPase
YP_003848536.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; response regulator receiver; GGDEF domain containing protein; KEGG: dar:Daro_1362 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; response regulator receiver
YP_003848537.1	KEGG: rfr:Rfer_0261 hypothetical protein
YP_003848538.1	SMART: EAL domain protein; GGDEF domain containing protein; manually curated; TIGRFAM: diguanylate cyclase; KEGG: slt:Slit_2462 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein
YP_003848539.1	KEGG: slt:Slit_2469 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_003848540.1	KEGG: slt:Slit_2464 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase
YP_003848541.1	KEGG: rba:RB2056 hypothetical protein
YP_003848542.1	KEGG: gur:Gura_1180 virulence protein-like protein
YP_003848543.1	KEGG: hit:NTHI0835 selenocysteine synthase
YP_003848544.1	KEGG: cmu:TC0602 helicase, putative; PFAM: type III restriction protein res subunit; helicase domain protein; helicase-associated; SMART: DEAD-like helicase ; helicase domain protein
YP_003848545.1	PFAM: protein of unknown function DUF1963; KEGG: ppp:PHYPADRAFT_116043 hypothetical protein
YP_003848546.1	KEGG: sjp:SJA_C1-08770 hypothetical protein
YP_003848547.1	KEGG: slt:Slit_2465 ornithine-acyl(acyl carrier protein) N-acyltransferase
YP_003848548.1	PFAM: diacylglycerol kinase; KEGG: slt:Slit_2466 diacylglycerol kinase
YP_003848549.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: slt:Slit_2539 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003848550.1	KEGG: slt:Slit_2540 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003848551.1	KEGG: slt:Slit_0141 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein
YP_003848552.1	KEGG: slt:Slit_0140 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein
YP_003848553.1	TIGRFAM: penicillin-binding protein 2; KEGG: slt:Slit_0139 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_003848554.1	KEGG: slt:Slit_0138 rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD
YP_003848555.1	KEGG: slt:Slit_0137 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC
YP_003848556.1	manually curated; TIGRFAM: cell shape determining protein, MreB/Mrl family; KEGG: slt:Slit_0136 cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl
YP_003848557.1	KEGG: slt:Slit_0135 glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit
YP_003848558.1	KEGG: slt:Slit_0134 glutamyl-tRNA(Gln) amidotransferase, A subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase
YP_003848559.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; KEGG: slt:Slit_0133 glutamyl-tRNA(Gln) amidotransferase, B subunit; SMART: Asn/Gln amidotransferase
YP_003848560.1	PFAM: NLP/P60 protein; KEGG: mei:Msip34_0442 NLP/P60 protein
YP_003848561.1	manually curated; TIGRFAM: glycine cleavage system T protein; KEGG: slt:Slit_2859 glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel
YP_003848562.1	KEGG: slt:Slit_2860 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein
YP_003848563.1	KEGG: slt:Slit_2861 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like
YP_003848564.1	PFAM: Redoxin domain protein; KEGG: slt:Slit_2862 redoxin domain protein
YP_003848565.1	PFAM: PfkB domain protein; KEGG: slt:Slit_2866 PfkB domain protein
YP_003848566.1	KEGG: psa:PST_1528 outer membrane lipoprotein, putative
YP_003848567.1	KEGG: ccs:CCNA_01481 hypothetical protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_003848568.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; KEGG: slt:Slit_2906 three-deoxy-D-manno-octulosonic-acid transferase domain protein
YP_003848569.1	KEGG: slt:Slit_2871 bis(5'-nucleosyl)-tetraphosphatase (symmetrical); TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase
YP_003848570.1	PFAM: acyltransferase 3; KEGG: sme:SM_b20810 putative membrane-located cell surface saccharide acetylase
YP_003848571.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: slt:Slit_2872 membrane bound O-acyl transferase MBOAT family protein
YP_003848572.1	KEGG: slt:Slit_2873 hypothetical protein
YP_003848573.1	KEGG: slt:Slit_2873 hypothetical protein
YP_003848574.1	PFAM: glycosyl transferase family 2; KEGG: slt:Slit_2874 glycosyl transferase family 2
YP_003848575.1	KEGG: har:HEAR0460 hypothetical protein
YP_003848576.1	PFAM: O-antigen polymerase; KEGG: slt:Slit_2875 O-antigen polymerase
YP_003848577.1	KEGG: slt:Slit_2876 glycosyl transferase group 1; manually curated; PFAM: glycosyl transferase group 1
YP_003848578.1	PFAM: glycosyl transferase family 2; KEGG: slt:Slit_2878 glycosyl transferase family 2
YP_003848579.1	PFAM: glycosyl transferase family 2; KEGG: slt:Slit_2879 glycosyl transferase family 2
YP_003848580.1	PFAM: polysaccharide biosynthesis protein CapD; KEGG: slt:Slit_2880 polysaccharide biosynthesis protein CapD
YP_003848581.1	PFAM: Glycosyl transferase, family 4, conserved region; KEGG: slt:Slit_2881 glycosyl transferase, family 4, conserved region
YP_003848582.1	KEGG: pfs:PFLU0463 lipopolysaccharide heptosyltransferase-1; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9
YP_003848583.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: mms:mma_2251 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_003848584.1	KEGG: pol:Bpro_4018 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase
YP_003848585.1	TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase
YP_003848586.1	KEGG: pag:PLES_55531 dTDP-D-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_003848587.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: slt:Slit_2882 NAD-dependent epimerase/dehydratase
YP_003848588.1	TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pfl:PFL_5107 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_003848589.1	PFAM: polysaccharide biosynthesis protein CapD; Polysaccharide biosynthesis domain protein; KEGG: har:HEAR1147 putative UDP-glucose 4-epimerase
YP_003848590.1	PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: mms:mma_2259 dTDP-4-dehydrorhamnose reductase
YP_003848591.1	PFAM: glycosyl transferase group 1; KEGG: mms:mma_2260 glycosyltransferase
YP_003848592.1	KEGG: rpd:RPD_0754 hypothetical protein
YP_003848593.1	PFAM: glycosyl transferase group 1; KEGG: har:HEAR1144 putative phosphatidylinositol alpha-mannosyltransferase
YP_003848594.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: mms:mma_2262 nucleoside-diphosphate-sugar epimerases
YP_003848595.1	KEGG: gur:Gura_2346 lipopolysaccharide biosynthesis protein-like protein
YP_003848596.1	KEGG: pfl:PFL_5101 O-acetyltransferase, putative
YP_003848597.1	PFAM: glycosyl transferase family 2; KEGG: rpa:RPA4058 glycosyl transferase family protein
YP_003848598.1	PFAM: glycosyl transferase family 2; KEGG: dal:Dalk_1042 glycosyl transferase family 2
YP_003848599.1	KEGG: pph:Ppha_0523 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_003848600.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: gur:Gura_3786 NAD-dependent epimerase/dehydratase
YP_003848601.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: gur:Gura_3787 NAD-dependent epimerase/dehydratase
YP_003848602.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: eca:ECA1427 putative dTDP-glucose 4,6-dehydratase
YP_003848603.1	PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bte:BTH_II1989 acetolactate synthase II, large subunit
YP_003848604.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: pin:Ping_0775 DegT/DnrJ/EryC1/StrS aminotransferase
YP_003848605.1	KEGG: gbm:Gbem_0856 CDP-glucose 4,6-dehydratase; TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_003848606.1	KEGG: pol:Bpro_4009 nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase
YP_003848607.1	KEGG: slt:Slit_2904 regulatory protein MarR
YP_003848608.1	KEGG: slt:Slit_2913 type I secretion outer membrane protein, TolC family; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein
YP_003848609.1	KEGG: nhl:Nhal_2175 hypothetical protein
YP_003848610.1	PFAM: UbiA prenyltransferase; KEGG: app:CAP2UW1_1475 UbiA prenyltransferase
YP_003848611.1	TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: nhl:Nhal_2173 HAD-superfamily subfamily IB hydrolase, TIGR01490
YP_003848612.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: noc:Noc_1950 short-chain dehydrogenase/reductase SDR
YP_003848613.1	PFAM: FAD linked oxidase domain protein; D-arabinono-14-lactone oxidase; KEGG: app:CAP2UW1_1472 FAD linked oxidase domain protein
YP_003848614.1	KEGG: pol:Bpro_4028 glycosyl transferase family protein
YP_003848615.1	KEGG: slt:Slit_2914 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_003848616.1	KEGG: slt:Slit_2915 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC
YP_003848617.1	PFAM: protein of unknown function DUF1289; KEGG: slt:Slit_2919 protein of unknown function DUF1289
YP_003848618.1	KEGG: slt:Slit_2920 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_003848619.1	PFAM: Fe(II) trafficking protein YggX; KEGG: slt:Slit_2949 Fe(II) trafficking protein YggX
YP_003848620.1	TIGRFAM: Polyphosphate kinase; KEGG: slt:Slit_2950 polyphosphate kinase; PFAM: Polyphosphate kinase
YP_003848621.1	KEGG: har:HEAR1099 putative histone H1-like protein HC2 (HC2 nucleoprotein)
YP_003848622.1	TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: slt:Slit_2952 putative phosphohistidine phosphatase, SixA; SMART: Phosphoglycerate mutase
YP_003848623.1	PFAM: protein of unknown function DUF344; KEGG: slt:Slit_2953 protein of unknown function DUF344
YP_003848624.1	KEGG: dar:Daro_3904 cyclic nucleotide-binding:sulfate transporter/antisigma-factor antagonist STAS:xanthine/uracil/vitamin C permease:sulphate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_003848625.1	PFAM: Protein of unknown function DUF2288; KEGG: slt:Slit_2955 protein of unknown function DUF2288
YP_003848626.1	KEGG: slt:Slit_2956 carbonic anhydrase family 3
YP_003848627.1	TIGRFAM: dihydroorotase, homodimeric type; KEGG: slt:Slit_2960 dihydroorotase, homodimeric type; PFAM: amidohydrolase
YP_003848628.1	SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: dar:Daro_1381 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III
YP_003848629.1	KEGG: slt:Slit_2846 phosphoribulokinase
YP_003848630.1	KEGG: dar:Daro_0544 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase
YP_003848631.1	PFAM: Rare lipoprotein B; KEGG: slt:Slit_2848 rare lipoprotein B
YP_003848632.1	TIGRFAM: DNA polymerase III, delta subunit; KEGG: slt:Slit_2849 DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta
YP_003848633.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: eba:ebA3572 divalent cation tolerance protein
YP_003848634.1	KEGG: slt:Slit_2851 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain-containing protein
YP_003848635.1	TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: slt:Slit_2853 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II
YP_003848636.1	KEGG: slt:Slit_2854 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein
YP_003848638.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: slt:Slit_2856 acetyl-CoA carboxylase, biotin carboxylase; SMART: biotin carboxylase domain protein
YP_003848639.1	KEGG: slt:Slit_2857 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase
YP_003848640.1	KEGG: slt:Slit_2858 MJ0042 family finger-like protein; TIGRFAM: MJ0042 family finger-like protein; PFAM: Protein of unknown function DUF3426
YP_003848641.1	PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: dma:DMR_34120 TetR family transcriptional regulator
YP_003848642.1	KEGG: har:HEAR2715 outer membrane transport protein involved in copper (silver) tolerance; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein
YP_003848643.1	KEGG: slt:Slit_2001 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein
YP_003848644.1	KEGG: slt:Slit_2002 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_003848645.1	KEGG: smb:smi_1531 cell wall surface anchor family protein
YP_003848646.1	PFAM: aminoglycoside phosphotransferase; KEGG: tbd:Tbd_1458 hypothetical protein
YP_003848647.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: slt:Slit_2962 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_003848648.1	KEGG: slt:Slit_2963 LppC family lipoprotein
YP_003848649.1	PFAM: uncharacterized protein family UPF0102; KEGG: slt:Slit_2964 protein of unknown function UPF0102
YP_003848650.1	PFAM: sugar isomerase (SIS); KEGG: slt:Slit_2965 sugar isomerase (SIS)
YP_003848651.1	PFAM: transport-associated; KEGG: azo:azo0869 hypothetical protein
YP_003848652.1	KEGG: slt:Slit_2967 RfaE bifunctional protein; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_003848653.1	KEGG: slt:Slit_2968 protein of unknown function DUF971
YP_003848654.1	KEGG: slt:Slit_2969 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase
YP_003848655.1	KEGG: slt:Slit_2970 hypothetical protein
YP_003848656.1	PFAM: plasmid stabilization system; KEGG: slt:Slit_2971 plasmid stabilization system
YP_003848657.1	KEGG: slt:Slit_2972 alkylphosphonate utilization operon protein PhnA; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein
YP_003848658.1	manually curated; KEGG: slt:Slit_2973 hypothetical protein
YP_003848659.1	PFAM: pseudouridine synthase; KEGG: slt:Slit_2974 pseudouridine synthase
YP_003848660.1	KEGG: gur:Gura_1614 hypothetical protein
YP_003848661.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: slt:Slit_2975 import inner membrane translocase subunit Tim44
YP_003848662.1	KEGG: nmu:Nmul_A0989 hypothetical protein
YP_003848663.1	KEGG: slt:Slit_2976 2-polyprenylphenol 6-hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain-containing protein
YP_003848664.1	KEGG: slt:Slit_2814 putative RNA methylase; PFAM: RNA methylase; THUMP domain-containing protein
YP_003848665.1	KEGG: slt:Slit_2815 hypothetical protein; manually curated; PFAM: uncharacterized protein family UPF0093
YP_003848666.1	KEGG: slt:Slit_2977 cobyrinic acid ac-diamide synthase
YP_003848667.1	KEGG: slt:Slit_1302 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003848668.1	KEGG: hypothetical protein
YP_003848669.1	PFAM: TnsA endonuclease; KEGG: mms:mma_3454 Tn7-like transposition protein A
YP_003848670.1	KEGG: mms:mma_3453 Tn7-like transposition protein B
YP_003848671.1	KEGG: mms:mma_3452 Tn7-like transposition protein C
YP_003848672.1	PFAM: EcoEI R domain protein; type III restriction protein res subunit; protein of unknown function DUF450; KEGG: pnu:Pnuc_1134 EcoEI R domain-containing protein; SMART: DEAD-like helicase
YP_003848673.1	manually curated; KEGG: pnu:Pnuc_1133 N-6 DNA methylase; PFAM: N-6 DNA methylase
YP_003848674.1	PFAM: restriction modification system DNA specificity domain; KEGG: dol:Dole_0822 restriction modification system DNA specificity subunit
YP_003848675.1	KEGG: mms:mma_3451 hypothetical protein
YP_003848676.1	KEGG: mmb:Mmol_1474 hypothetical protein
YP_003848677.1	KEGG: mms:mma_3450 transposition protein, TnsD-related protein
YP_003848679.1	KEGG: psl:Psta_3817 protein of unknown function DUF1080
YP_003848680.1	KEGG: har:HEAR0512 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_003848681.1	TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: mms:mma_3040 phosphonate ABC-type transport system ATP-binding protein; SMART: AAA ATPase
YP_003848682.1	KEGG: mms:mma_3041 phosphonate ABC-type transport system substrate-binding protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; PFAM: extracellular solute-binding protein family 3
YP_003848683.1	KEGG: mms:mma_3042 phosphonate ABC-type transport system permease protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_003848684.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ana:all8087 glycerate dehydrogenase
YP_003848685.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mms:mma_3044 LysR family transcriptional regulator
YP_003848686.1	KEGG: slt:Slit_2978 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II
YP_003848687.1	TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: slt:Slit_2979 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase
YP_003848688.1	KEGG: slt:Slit_2980 ATP synthase F1, epsilon subunit; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like
YP_003848689.1	TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: slt:Slit_2981 ATP synthase F1, beta subunit; SMART: AAA ATPase
YP_003848690.1	KEGG: slt:Slit_2982 ATP synthase F1, gamma subunit; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit
YP_003848691.1	KEGG: slt:Slit_2983 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein
YP_003848692.1	KEGG: slt:Slit_2984 ATP synthase F1, delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit
YP_003848693.1	KEGG: slt:Slit_2985 ATP synthase F0, B subunit; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit
YP_003848694.1	KEGG: mfa:Mfla_2749 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit
YP_003848695.1	KEGG: mfa:Mfla_2750 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit
YP_003848696.1	KEGG: ATP synthase I chain
YP_003848697.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: slt:Slit_2989 ParB-like partition protein; SMART: ParB domain protein nuclease
YP_003848698.1	KEGG: slt:Slit_2990 cobyrinic acid ac-diamide synthase
YP_003848699.1	KEGG: slt:Slit_2991 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein
YP_003848700.1	KEGG: mmb:Mmol_2342 glucose inhibited division protein A; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A
YP_003848701.1	KEGG: slt:Slit_2993 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related
YP_003848702.1	KEGG: slt:Slit_2994 membrane protein insertase, YidC/Oxa1 family domain containing protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein
YP_003848703.1	KEGG: slt:Slit_2995 protein of unknown function DUF37; manually curated; PFAM: protein of unknown function DUF37