-- dump date 20120504_145017 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 553190000001 SEQ_END SEQ_END NC_013721.1 1617545 1617545 DR NC_013721.1; contig end 1617545..1617545 Gardnerella vaginalis 409-05 YP_003373275.1 CDS lysR NC_013721.1 12 914 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(12..914) Gardnerella vaginalis 409-05 8710080 YP_003373276.1 CDS ahpF NC_013721.1 956 2629 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR03140; alkyl hydroperoxide reductase, F subunit complement(956..2629) Gardnerella vaginalis 409-05 8709300 YP_003373277.1 CDS ahpC NC_013721.1 2759 3322 R identified by match to protein family HMM PF00578; match to protein family HMM PF08534; match to protein family HMM TIGR03137; peroxiredoxin complement(2759..3322) Gardnerella vaginalis 409-05 8710003 YP_003373278.1 CDS HMPREF0424_0004 NC_013721.1 3676 4854 D identified by match to protein family HMM PF01764; triacylglycerol lipase 3676..4854 Gardnerella vaginalis 409-05 8708750 YP_003373279.1 CDS HMPREF0424_0005 NC_013721.1 5200 7962 D identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain protein 5200..7962 Gardnerella vaginalis 409-05 8709593 YP_003373280.1 CDS HMPREF0424_0007 NC_013721.1 8234 9112 R identified by match to protein family HMM PF01435; peptidase, M48 family complement(8234..9112) Gardnerella vaginalis 409-05 8710052 YP_003373281.1 CDS HMPREF0424_0008 NC_013721.1 9218 10696 R ferredoxin/ferredoxin-NADP reductase family protein complement(9218..10696) Gardnerella vaginalis 409-05 8709130 YP_003373282.1 CDS HMPREF0424_0009 NC_013721.1 10989 13220 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; heavy metal translocating P-type ATPase complement(10989..13220) Gardnerella vaginalis 409-05 8709083 YP_003373283.1 CDS HMPREF0424_0010 NC_013721.1 13557 13760 R hypothetical protein complement(13557..13760) Gardnerella vaginalis 409-05 8709994 YP_003373284.1 CDS HMPREF0424_0013 NC_013721.1 14370 14849 R identified by match to protein family HMM PF00210; ferritin-like protein complement(14370..14849) Gardnerella vaginalis 409-05 8710059 YP_003373285.1 CDS HMPREF0424_0014 NC_013721.1 14907 16202 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; CBS domain protein complement(14907..16202) Gardnerella vaginalis 409-05 8709704 YP_003373286.1 CDS HMPREF0424_0015 NC_013721.1 16279 17049 R hypothetical protein complement(16279..17049) Gardnerella vaginalis 409-05 8709890 YP_003373287.1 CDS HMPREF0424_0016 NC_013721.1 17046 18140 R identified by match to protein family HMM PF03773; hypothetical protein complement(17046..18140) Gardnerella vaginalis 409-05 8709178 YP_003373288.1 CDS cah NC_013721.1 18196 18855 R identified by match to protein family HMM PF00484; carbonate dehydratase complement(18196..18855) Gardnerella vaginalis 409-05 8709409 YP_003373289.1 CDS ppc NC_013721.1 19084 21840 R identified by match to protein family HMM PF00311; phosphoenolpyruvate carboxykinase (GTP) complement(19084..21840) Gardnerella vaginalis 409-05 8709370 YP_003373290.1 CDS HMPREF0424_0019 NC_013721.1 22047 23768 D identified by match to protein family HMM PF06738; hypothetical protein 22047..23768 Gardnerella vaginalis 409-05 8709439 YP_003373291.1 CDS trpS NC_013721.1 23867 24958 R identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233; tryptophan--tRNA ligase complement(23867..24958) Gardnerella vaginalis 409-05 8709730 YP_003373292.1 CDS HMPREF0424_0021 NC_013721.1 25104 25484 D hypothetical protein 25104..25484 Gardnerella vaginalis 409-05 8709590 YP_003373293.1 CDS HMPREF0424_0022 NC_013721.1 25602 26018 R hypothetical protein complement(25602..26018) Gardnerella vaginalis 409-05 8709166 YP_003373294.1 CDS glgP NC_013721.1 26255 28744 D identified by match to protein family HMM PF00343; match to protein family HMM TIGR02093; phosphorylase, glycogen/starch/alpha-glucan family 26255..28744 Gardnerella vaginalis 409-05 8709619 YP_003373295.1 CDS HMPREF0424_0024 NC_013721.1 28948 29157 R hypothetical protein complement(28948..29157) Gardnerella vaginalis 409-05 8708830 YP_003373296.1 CDS HMPREF0424_0025 NC_013721.1 29319 30023 D identified by match to protein family HMM PF01694; peptidase, S54 (rhomboid) family protein 29319..30023 Gardnerella vaginalis 409-05 8709538 YP_003373297.1 CDS HMPREF0424_0026 NC_013721.1 30280 31581 D hypothetical protein 30280..31581 Gardnerella vaginalis 409-05 8709819 YP_003373298.1 CDS HMPREF0424_0027 NC_013721.1 31645 32037 R identified by match to protein family HMM PF06781; putative septation inhibitor protein complement(31645..32037) Gardnerella vaginalis 409-05 8709269 YP_003373299.1 CDS HMPREF0424_0028 NC_013721.1 32115 32870 D identified by match to protein family HMM PF05949; hypothetical protein 32115..32870 Gardnerella vaginalis 409-05 8709692 YP_003373300.1 CDS HMPREF0424_0029 NC_013721.1 32916 34022 D identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 32916..34022 Gardnerella vaginalis 409-05 8709153 YP_003373301.1 CDS HMPREF0424_0030 NC_013721.1 34425 36428 R identified by match to protein family HMM PF00069; match to protein family HMM PF03793; overlaps another CDS with the same product name; kinase domain protein complement(34425..36428) Gardnerella vaginalis 409-05 8709487 YP_003373302.1 CDS HMPREF0424_0031 NC_013721.1 36425 37387 R identified by match to protein family HMM PF00069; overlaps another CDS with the same product name; kinase domain protein complement(36425..37387) Gardnerella vaginalis 409-05 8708949 YP_003373303.1 CDS HMPREF0424_0032 NC_013721.1 37384 38850 R identified by match to protein family HMM PF00905; penicillin-binding protein, transpeptidase domain protein complement(37384..38850) Gardnerella vaginalis 409-05 8709310 YP_003373304.1 CDS HMPREF0424_0033 NC_013721.1 38843 40324 R identified by match to protein family HMM PF01098; cell cycle protein, FtsW/RodA/SpoVE family complement(38843..40324) Gardnerella vaginalis 409-05 8708747 YP_003373305.1 CDS HMPREF0424_0034 NC_013721.1 40321 41985 R identified by match to protein family HMM PF00481; protein phosphatase 2C complement(40321..41985) Gardnerella vaginalis 409-05 8709651 YP_003373306.1 CDS HMPREF0424_0035 NC_013721.1 41989 42525 R identified by match to protein family HMM PF00498; FHA domain protein complement(41989..42525) Gardnerella vaginalis 409-05 8708951 YP_003373307.1 CDS HMPREF0424_0036 NC_013721.1 42559 43260 R identified by match to protein family HMM PF00498; FHA domain protein complement(42559..43260) Gardnerella vaginalis 409-05 8709127 YP_003373308.1 CDS HMPREF0424_0037 NC_013721.1 43416 44153 D identified by match to protein family HMM PF01569; PAP2 family protein 43416..44153 Gardnerella vaginalis 409-05 8709990 YP_003373309.1 CDS mscL NC_013721.1 44177 44587 D identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 44177..44587 Gardnerella vaginalis 409-05 8709265 YP_003373310.1 CDS HMPREF0424_0039 NC_013721.1 44673 45338 R hypothetical protein complement(44673..45338) Gardnerella vaginalis 409-05 8709464 YP_003373311.1 CDS gyrA NC_013721.1 45488 48118 R identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase, A subunit complement(45488..48118) Gardnerella vaginalis 409-05 8708757 YP_003373312.1 CDS gyrB NC_013721.1 48188 50263 R identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase, B subunit complement(48188..50263) Gardnerella vaginalis 409-05 8709595 YP_003373313.1 CDS HMPREF0424_0042 NC_013721.1 50444 50911 R hypothetical protein complement(50444..50911) Gardnerella vaginalis 409-05 8709833 YP_003373314.1 CDS recF NC_013721.1 50911 52212 R identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611; DNA replication and repair protein RecF complement(50911..52212) Gardnerella vaginalis 409-05 8709255 YP_003373315.1 CDS dnaN NC_013721.1 52311 53435 R identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III, beta subunit complement(52311..53435) Gardnerella vaginalis 409-05 8709945 YP_003373316.1 CDS dnaA NC_013721.1 53866 55485 R identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA complement(53866..55485) Gardnerella vaginalis 409-05 8709161 YP_003373317.1 CDS rpmH NC_013721.1 55874 56008 D identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; ribosomal protein L34 55874..56008 Gardnerella vaginalis 409-05 8709829 YP_003373318.1 CDS HMPREF0424_0047 NC_013721.1 56120 56527 D identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 56120..56527 Gardnerella vaginalis 409-05 8708980 YP_003373319.1 CDS HMPREF0424_0048 NC_013721.1 56708 56854 D identified by glimmer; putative; hypothetical protein 56708..56854 Gardnerella vaginalis 409-05 8709407 YP_003373320.1 CDS yidC NC_013721.1 56886 57899 D identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592; membrane protein insertase, YidC/Oxa1 family 56886..57899 Gardnerella vaginalis 409-05 8708852 YP_003373321.1 CDS HMPREF0424_0050 NC_013721.1 58036 58590 D identified by match to protein family HMM PF01424; R3H domain protein 58036..58590 Gardnerella vaginalis 409-05 8709290 YP_003373322.1 CDS gidB NC_013721.1 58669 59436 D identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; 16S rRNA methyltransferase GidB 58669..59436 Gardnerella vaginalis 409-05 8710020 YP_003373323.1 CDS HMPREF0424_0052 NC_013721.1 60342 61313 D identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein Soj family protein 60342..61313 Gardnerella vaginalis 409-05 8709144 YP_003373324.1 CDS HMPREF0424_0053 NC_013721.1 61313 62665 D identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB-like protein 61313..62665 Gardnerella vaginalis 409-05 8709728 YP_003373325.1 CDS trxB NC_013721.1 62789 63730 R identified by match to protein family HMM PF00070; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase complement(62789..63730) Gardnerella vaginalis 409-05 8709517 YP_003373326.1 CDS HMPREF0424_0055 NC_013721.1 63765 65984 R hypothetical protein complement(63765..65984) Gardnerella vaginalis 409-05 8709004 YP_003373327.1 CDS HMPREF0424_0056 NC_013721.1 66150 67946 R identified by match to protein family HMM PF03023; putative integral membrane protein MviN complement(66150..67946) Gardnerella vaginalis 409-05 8709909 YP_003373328.1 CDS HMPREF0424_0059 NC_013721.1 70316 71092 R identified by match to protein family HMM PF00293; hydrolase, NUDIX family complement(70316..71092) Gardnerella vaginalis 409-05 8709125 YP_003373329.1 CDS HMPREF0424_0060 NC_013721.1 71180 72607 D identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR02692; tRNA adenylyltransferase 71180..72607 Gardnerella vaginalis 409-05 8708758 YP_003373330.1 CDS HMPREF0424_0061 NC_013721.1 72664 73290 R hypothetical protein complement(72664..73290) Gardnerella vaginalis 409-05 8709635 YP_003373331.1 CDS ksgA NC_013721.1 73420 74328 R identified by match to protein family HMM PF00398; match to protein family HMM TIGR00755; dimethyladenosine transferase complement(73420..74328) Gardnerella vaginalis 409-05 8709666 YP_003373332.1 CDS HMPREF0424_0063 NC_013721.1 74372 75754 R identified by match to protein family HMM PF03990; match to protein family HMM PF07501; G5 domain protein complement(74372..75754) Gardnerella vaginalis 409-05 8708882 YP_003373333.1 CDS HMPREF0424_0065 NC_013721.1 76444 78285 D identified by match to protein family HMM PF00069; match to protein family HMM PF01163; kinase domain protein 76444..78285 Gardnerella vaginalis 409-05 8710078 YP_003373334.1 CDS HMPREF0424_0066 NC_013721.1 78418 79389 D hypothetical protein 78418..79389 Gardnerella vaginalis 409-05 8709038 YP_003373335.1 CDS HMPREF0424_0067 NC_013721.1 79485 80444 R hypothetical protein complement(79485..80444) Gardnerella vaginalis 409-05 8709182 YP_003373336.1 CDS HMPREF0424_0068 NC_013721.1 80685 81812 D identified by match to protein family HMM PF00005; match to protein family HMM PF08402; ABC transporter ATP-binding protein 80685..81812 Gardnerella vaginalis 409-05 8709726 YP_003373337.1 CDS HMPREF0424_0069 NC_013721.1 82062 83477 D hypothetical protein 82062..83477 Gardnerella vaginalis 409-05 8709443 YP_003373338.1 CDS HMPREF0424_0071 NC_013721.1 83773 84033 R identified by match to protein family HMM PF00462; glutaredoxin complement(83773..84033) Gardnerella vaginalis 409-05 8710069 YP_003373339.1 CDS ftsY NC_013721.1 84222 85403 D identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 84222..85403 Gardnerella vaginalis 409-05 8709073 YP_003373340.1 CDS HMPREF0424_0073 NC_013721.1 85566 87344 D identified by match to protein family HMM PF00909; ammonium Transporter Family 85566..87344 Gardnerella vaginalis 409-05 8709175 YP_003373341.1 CDS HMPREF0424_0074 NC_013721.1 87765 89126 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 87765..89126 Gardnerella vaginalis 409-05 8708960 YP_003373342.1 CDS dnaB NC_013721.1 89207 90652 D identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665; replicative DNA helicase 89207..90652 Gardnerella vaginalis 409-05 8709722 YP_003373343.1 CDS HMPREF0424_0076 NC_013721.1 90668 92086 D identified by match to protein family HMM PF08245; match to protein family HMM PF08353; Mur ligase middle domain protein 90668..92086 Gardnerella vaginalis 409-05 8709204 YP_003373344.1 CDS HMPREF0424_0077 NC_013721.1 92092 92886 D identified by match to protein family HMM PF07685; CobB/CobQ-like protein 92092..92886 Gardnerella vaginalis 409-05 8709900 YP_003373345.1 CDS HMPREF0424_0078 NC_013721.1 93164 93583 D identified by match to protein family HMM PF03681; toxin-antitoxin system, antitoxin component, HicB family 93164..93583 Gardnerella vaginalis 409-05 8709128 YP_003373346.1 CDS upp NC_013721.1 93729 94367 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase complement(93729..94367) Gardnerella vaginalis 409-05 8709094 YP_003373347.1 CDS HMPREF0424_0080 NC_013721.1 94686 95339 R hypothetical protein complement(94686..95339) Gardnerella vaginalis 409-05 8709949 YP_003373348.1 CDS HMPREF0424_0081 NC_013721.1 95386 96582 R identified by match to protein family HMM PF00293; match to protein family HMM PF00300; hydrolase, NUDIX family complement(95386..96582) Gardnerella vaginalis 409-05 8709563 YP_003373349.1 CDS dcm_1 NC_013721.1 97158 98432 D identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; DNA (cytosine-5-)-methyltransferase 97158..98432 Gardnerella vaginalis 409-05 8709820 YP_003373350.1 CDS mutH NC_013721.1 98542 99990 D identified by match to protein family HMM PF02976; DNA mismatch repair enzyme MutH 98542..99990 Gardnerella vaginalis 409-05 8709120 YP_003373351.1 CDS ppk NC_013721.1 100273 102510 R identified by match to protein family HMM PF02503; match to protein family HMM TIGR03705; polyphosphate kinase 1 complement(100273..102510) Gardnerella vaginalis 409-05 8709254 YP_003373352.1 CDS HMPREF0424_0085 NC_013721.1 102494 102634 R identified by glimmer; putative; hypothetical protein complement(102494..102634) Gardnerella vaginalis 409-05 8709988 YP_003373353.1 CDS gla NC_013721.1 103173 103904 D identified by match to protein family HMM PF00230; glycerol facilitator-aquaporin 103173..103904 Gardnerella vaginalis 409-05 8709414 YP_003373354.1 CDS HMPREF0424_0087 NC_013721.1 104005 105129 D identified by match to protein family HMM PF00749; tRNA synthetase class I (E and Q), catalytic domain protein 104005..105129 Gardnerella vaginalis 409-05 8708873 YP_003373355.1 CDS HMPREF0424_0088 NC_013721.1 105164 105964 D identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; pyridoxal phosphate enzyme, YggS family 105164..105964 Gardnerella vaginalis 409-05 8708874 YP_003373356.1 CDS HMPREF0424_0089 NC_013721.1 105986 106801 D identified by match to protein family HMM PF01557; FAH family protein 105986..106801 Gardnerella vaginalis 409-05 8709559 YP_003373357.1 CDS HMPREF0424_0090 NC_013721.1 106875 108143 R identified by glimmer; putative; hypothetical protein complement(106875..108143) Gardnerella vaginalis 409-05 8709022 YP_003373358.1 CDS HMPREF0424_0091 NC_013721.1 108151 108858 R identified by glimmer; putative; hypothetical protein complement(108151..108858) Gardnerella vaginalis 409-05 8709724 YP_003373359.1 CDS clpB NC_013721.1 109250 111844 D identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346; ATP-dependent chaperone protein ClpB 109250..111844 Gardnerella vaginalis 409-05 8709077 YP_003373360.1 CDS HMPREF0424_0093 NC_013721.1 112188 112514 D identified by glimmer; putative; hypothetical protein 112188..112514 Gardnerella vaginalis 409-05 8709760 YP_003373361.1 CDS HMPREF0424_0094 NC_013721.1 112562 113329 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 112562..113329 Gardnerella vaginalis 409-05 8709700 YP_003373362.1 CDS HMPREF0424_0095 NC_013721.1 113401 114957 D overlaps another CDS with the same product name; hypothetical protein 113401..114957 Gardnerella vaginalis 409-05 8709308 YP_003373363.1 CDS HMPREF0424_0096 NC_013721.1 114947 115678 D overlaps another CDS with the same product name; hypothetical protein 114947..115678 Gardnerella vaginalis 409-05 8710024 YP_003373364.1 CDS rmuC NC_013721.1 115733 117073 D identified by match to protein family HMM PF02646; RmuC domain protein 115733..117073 Gardnerella vaginalis 409-05 8709454 YP_003373365.1 CDS HMPREF0424_0098 NC_013721.1 117131 117898 D hypothetical protein 117131..117898 Gardnerella vaginalis 409-05 8709527 YP_003373366.1 CDS HMPREF0424_0099 NC_013721.1 117956 118762 D identified by match to protein family HMM PF00588; RNA methyltransferase, TrmH family 117956..118762 Gardnerella vaginalis 409-05 8708821 YP_003373367.1 CDS HMPREF0424_0100 NC_013721.1 118908 119900 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 118908..119900 Gardnerella vaginalis 409-05 8709686 YP_003373368.1 CDS HMPREF0424_0101 NC_013721.1 119897 120871 D hypothetical protein 119897..120871 Gardnerella vaginalis 409-05 8709013 YP_003373369.1 CDS HMPREF0424_0102 NC_013721.1 120940 121071 R identified by glimmer; putative; hypothetical protein complement(120940..121071) Gardnerella vaginalis 409-05 8709191 YP_003373370.1 CDS HMPREF0424_0103 NC_013721.1 121784 123334 R identified by match to protein family HMM PF01289; thiol-activated cytolysin complement(121784..123334) Gardnerella vaginalis 409-05 8709832 YP_003373371.1 CDS gatC NC_013721.1 123833 124129 D identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135; glutamyl-tRNA(Gln) amidotransferase, C subunit 123833..124129 Gardnerella vaginalis 409-05 8709969 YP_003373372.1 CDS gatA NC_013721.1 124132 125673 D identified by match to protein family HMM PF01425; match to protein family HMM TIGR00132; aspartyl/glutamyl-tRNA amidotransferase subunit A 124132..125673 Gardnerella vaginalis 409-05 8709278 YP_003373373.1 CDS gatB NC_013721.1 125706 127205 D identified by match to protein family HMM PF01162; match to protein family HMM PF02637; match to protein family HMM PF02934; match to protein family HMM TIGR00133; GatB/GatE catalytic domain protein 125706..127205 Gardnerella vaginalis 409-05 8709488 YP_003373374.1 CDS HMPREF0424_0107 NC_013721.1 127462 128370 D identified by match to protein family HMM PF00583; acetyltransferase, GNAT family 127462..128370 Gardnerella vaginalis 409-05 8708900 YP_003373375.1 CDS HMPREF0424_0108 NC_013721.1 128370 128684 D hypothetical protein 128370..128684 Gardnerella vaginalis 409-05 8709897 YP_003373376.1 CDS HMPREF0424_0109 NC_013721.1 128776 130395 D identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 128776..130395 Gardnerella vaginalis 409-05 8709306 YP_003373377.1 CDS rho NC_013721.1 130733 132703 D identified by match to protein family HMM PF00006; match to protein family HMM PF07497; match to protein family HMM PF07498; match to protein family HMM TIGR00767; transcription termination factor Rho 130733..132703 Gardnerella vaginalis 409-05 8709503 YP_003373378.1 CDS HMPREF0424_0111 NC_013721.1 132800 134005 R identified by match to protein family HMM PF00155; putative aspartate transaminase complement(132800..134005) Gardnerella vaginalis 409-05 8708756 YP_003373379.1 CDS HMPREF0424_0112 NC_013721.1 134288 134749 D identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 134288..134749 Gardnerella vaginalis 409-05 8709893 YP_003373380.1 CDS HMPREF0424_0113 NC_013721.1 134755 135096 D identified by match to protein family HMM PF01817; match to protein family HMM TIGR01795; chorismate mutase 134755..135096 Gardnerella vaginalis 409-05 8709479 YP_003373381.1 CDS fbaA NC_013721.1 135243 136298 D identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01520; fructose-bisphosphate aldolase, class II 135243..136298 Gardnerella vaginalis 409-05 8708800 YP_003373382.1 CDS purA NC_013721.1 136414 137715 D identified by match to protein family HMM PF00709; match to protein family HMM TIGR00184; adenylosuccinate synthase 136414..137715 Gardnerella vaginalis 409-05 8709387 YP_003373383.1 CDS HMPREF0424_0116 NC_013721.1 137894 138313 D identified by match to protein family HMM PF02537; CrcB-like protein 137894..138313 Gardnerella vaginalis 409-05 8708913 YP_003373384.1 CDS HMPREF0424_0117 NC_013721.1 138313 138723 D identified by match to protein family HMM PF02537; putative CrcB protein 138313..138723 Gardnerella vaginalis 409-05 8709605 YP_003373385.1 CDS HMPREF0424_0118 NC_013721.1 138763 140130 D identified by match to protein family HMM PF00654; chloride transporter, ClC family 138763..140130 Gardnerella vaginalis 409-05 8709020 YP_003373386.1 CDS HMPREF0424_0119 NC_013721.1 140254 141429 D hypothetical protein 140254..141429 Gardnerella vaginalis 409-05 8709743 YP_003373387.1 CDS HMPREF0424_0120 NC_013721.1 141416 142492 D identified by match to protein family HMM PF00437; type II/IV secretion system protein 141416..142492 Gardnerella vaginalis 409-05 8709219 YP_003373388.1 CDS HMPREF0424_0121 NC_013721.1 142522 143097 D hypothetical protein 142522..143097 Gardnerella vaginalis 409-05 8709927 YP_003373389.1 CDS HMPREF0424_0122 NC_013721.1 143101 143748 D hypothetical protein 143101..143748 Gardnerella vaginalis 409-05 8709012 YP_003373390.1 CDS HMPREF0424_0123 NC_013721.1 143884 144162 D hypothetical protein 143884..144162 Gardnerella vaginalis 409-05 8709351 YP_003373391.1 CDS HMPREF0424_0124 NC_013721.1 144345 144572 D hypothetical protein 144345..144572 Gardnerella vaginalis 409-05 8708925 YP_003373392.1 CDS HMPREF0424_0125 NC_013721.1 144569 144973 D identified by match to protein family HMM TIGR03816; TadE-like protein 144569..144973 Gardnerella vaginalis 409-05 8708775 YP_003373393.1 CDS dnaX NC_013721.1 145079 147484 D identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397; DNA polymerase III, subunit gamma and tau 145079..147484 Gardnerella vaginalis 409-05 8709637 YP_003373394.1 CDS recR NC_013721.1 147491 148099 D identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615; recombination protein RecR 147491..148099 Gardnerella vaginalis 409-05 8709353 YP_003373395.1 CDS asd NC_013721.1 149711 150778 D identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase 149711..150778 Gardnerella vaginalis 409-05 8709131 YP_003373396.1 CDS HMPREF0424_0131 NC_013721.1 150831 151451 D hypothetical protein 150831..151451 Gardnerella vaginalis 409-05 8708901 YP_003373397.1 CDS HMPREF0424_0132 NC_013721.1 151561 152262 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 151561..152262 Gardnerella vaginalis 409-05 8708892 YP_003373398.1 CDS HMPREF0424_0133 NC_013721.1 152276 155029 D identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein 152276..155029 Gardnerella vaginalis 409-05 8709090 YP_003373399.1 CDS HMPREF0424_0134 NC_013721.1 155117 156700 D identified by match to protein family HMM PF00324; amino acid permease 155117..156700 Gardnerella vaginalis 409-05 8709865 YP_003373400.1 CDS HMPREF0424_0135 NC_013721.1 156737 157444 D identified by match to protein family HMM PF01939; hypothetical protein 156737..157444 Gardnerella vaginalis 409-05 8709801 YP_003373401.1 CDS HMPREF0424_0136 NC_013721.1 157529 158518 R identified by match to protein family HMM PF00254; peptidyl-prolyl cis-trans isomerase, FKBP-type complement(157529..158518) Gardnerella vaginalis 409-05 8708955 YP_003373402.1 CDS HMPREF0424_0137 NC_013721.1 158598 160394 D hypothetical protein 158598..160394 Gardnerella vaginalis 409-05 8709425 YP_003373403.1 CDS HMPREF0424_0138 NC_013721.1 160396 161451 D hypothetical protein 160396..161451 Gardnerella vaginalis 409-05 8708906 YP_003373404.1 CDS HMPREF0424_0139 NC_013721.1 161495 162517 D hypothetical protein 161495..162517 Gardnerella vaginalis 409-05 8708940 YP_003373405.1 CDS metA NC_013721.1 162847 163878 D identified by match to protein family HMM PF04204; match to protein family HMM TIGR01001; homoserine O-succinyltransferase 162847..163878 Gardnerella vaginalis 409-05 8710042 YP_003373406.1 CDS atpB NC_013721.1 164081 164935 D identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131; ATP synthase F0, A subunit 164081..164935 Gardnerella vaginalis 409-05 8708845 YP_003373407.1 CDS HMPREF0424_0143 NC_013721.1 165036 165269 D identified by match to protein family HMM PF00137; putative F0F1 ATP synthase subunit C 165036..165269 Gardnerella vaginalis 409-05 8709186 YP_003373408.1 CDS atpF NC_013721.1 165330 165872 D identified by match to protein family HMM PF00430; match to protein family HMM TIGR01144; ATP synthase F0, B subunit 165330..165872 Gardnerella vaginalis 409-05 8709711 YP_003373409.1 CDS atpH NC_013721.1 165972 166553 D identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145; ATP synthase F1, delta subunit 165972..166553 Gardnerella vaginalis 409-05 8709330 YP_003373410.1 CDS atpA NC_013721.1 166570 168231 D identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR00962; ATP synthase F1, alpha subunit 166570..168231 Gardnerella vaginalis 409-05 8709145 YP_003373411.1 CDS atpG NC_013721.1 168235 169239 D identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1, gamma subunit 168235..169239 Gardnerella vaginalis 409-05 8709845 YP_003373412.1 CDS atpD NC_013721.1 169246 170733 D identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR01039; ATP synthase F1, beta subunit 169246..170733 Gardnerella vaginalis 409-05 8709612 YP_003373413.1 CDS HMPREF0424_0149 NC_013721.1 170817 171050 D ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein 170817..171050 Gardnerella vaginalis 409-05 8708749 YP_003373414.1 CDS HMPREF0424_0150 NC_013721.1 171790 171975 D identified by glimmer; putative; hypothetical protein 171790..171975 Gardnerella vaginalis 409-05 8709079 YP_003373415.1 CDS HMPREF0424_0151 NC_013721.1 171994 172713 D identified by match to protein family HMM PF02661; toxin-antitoxin system, toxin component, Fic family 171994..172713 Gardnerella vaginalis 409-05 8709148 YP_003373416.1 CDS HMPREF0424_0152 NC_013721.1 173008 174258 D identified by match to protein family HMM PF02661; Fic family protein 173008..174258 Gardnerella vaginalis 409-05 8709792 YP_003373417.1 CDS HMPREF0424_0153 NC_013721.1 174289 175338 D thiamine biosynthesis lipoprotein, ApbE family 174289..175338 Gardnerella vaginalis 409-05 8708928 YP_003373418.1 CDS HMPREF0424_0154 NC_013721.1 175667 177004 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase/response regulator complement(175667..177004) Gardnerella vaginalis 409-05 8709468 YP_003373419.1 CDS HMPREF0424_0155 NC_013721.1 177083 177784 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain protein complement(177083..177784) Gardnerella vaginalis 409-05 8709313 YP_003373420.1 CDS bcrA NC_013721.1 177924 178688 D identified by match to protein family HMM PF00005; bacitracin transport ATP-binding protein BcrA 177924..178688 Gardnerella vaginalis 409-05 8709947 YP_003373421.1 CDS HMPREF0424_0157 NC_013721.1 178685 179410 D hypothetical protein 178685..179410 Gardnerella vaginalis 409-05 8709107 YP_003373422.1 CDS HMPREF0424_0158 NC_013721.1 179424 180188 D hypothetical protein 179424..180188 Gardnerella vaginalis 409-05 8709821 YP_003373423.1 CDS HMPREF0424_0159 NC_013721.1 180292 180897 D identified by glimmer; putative; hypothetical protein 180292..180897 Gardnerella vaginalis 409-05 8709828 YP_003373424.1 CDS HMPREF0424_0160 NC_013721.1 181139 182857 D identified by match to protein family HMM PF03239; iron permease FTR1 family protein 181139..182857 Gardnerella vaginalis 409-05 8708971 YP_003373425.1 CDS HMPREF0424_0161 NC_013721.1 182953 183597 D pathogen-specific surface antigen family protein 182953..183597 Gardnerella vaginalis 409-05 8709634 YP_003373426.1 CDS HMPREF0424_0162 NC_013721.1 183670 184941 D hypothetical protein 183670..184941 Gardnerella vaginalis 409-05 8709710 YP_003373427.1 CDS HMPREF0424_0163 NC_013721.1 184954 186288 D identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein 184954..186288 Gardnerella vaginalis 409-05 8708815 YP_003373428.1 CDS HMPREF0424_0164 NC_013721.1 186278 187645 D identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein 186278..187645 Gardnerella vaginalis 409-05 8709528 YP_003373429.1 CDS HMPREF0424_0165 NC_013721.1 187686 188531 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 187686..188531 Gardnerella vaginalis 409-05 8708891 YP_003373430.1 CDS HMPREF0424_0166 NC_013721.1 188577 189176 D hypothetical protein 188577..189176 Gardnerella vaginalis 409-05 8709417 YP_003373431.1 CDS HMPREF0424_0167 NC_013721.1 189189 189425 R identified by glimmer; putative; hypothetical protein complement(189189..189425) Gardnerella vaginalis 409-05 8710015 YP_003373432.1 CDS HMPREF0424_0168 NC_013721.1 189608 190111 R identified by glimmer; putative; hypothetical protein complement(189608..190111) Gardnerella vaginalis 409-05 8709536 YP_003373433.1 CDS HMPREF0424_0169 NC_013721.1 190305 191045 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; transcriptional regulator, LuxR family 190305..191045 Gardnerella vaginalis 409-05 8709866 YP_003373434.1 CDS HMPREF0424_0170 NC_013721.1 191039 192256 D identified by glimmer; putative; hypothetical protein 191039..192256 Gardnerella vaginalis 409-05 8709158 YP_003373435.1 CDS HMPREF0424_0171 NC_013721.1 192295 192555 R identified by glimmer; putative; hypothetical protein complement(192295..192555) Gardnerella vaginalis 409-05 8709647 YP_003373436.1 CDS HMPREF0424_0172 NC_013721.1 192745 192957 R hypothetical protein complement(192745..192957) Gardnerella vaginalis 409-05 8709074 YP_003373437.1 CDS HMPREF0424_0173 NC_013721.1 193519 193647 D putative addiction module killer protein 193519..193647 Gardnerella vaginalis 409-05 8709332 YP_003373438.1 CDS HMPREF0424_0174 NC_013721.1 193641 193928 D identified by match to protein family HMM TIGR02684; putative addiction module antidote protein 193641..193928 Gardnerella vaginalis 409-05 8709877 YP_003373439.1 CDS HMPREF0424_0175 NC_013721.1 194140 194724 R putative lipoprotein complement(194140..194724) Gardnerella vaginalis 409-05 8709324 YP_003373440.1 CDS HMPREF0424_0176 NC_013721.1 195105 196184 R identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase, beta subunit complement(195105..196184) Gardnerella vaginalis 409-05 8709650 YP_003373441.1 CDS HMPREF0424_0177 NC_013721.1 196267 198492 R identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM PF08343; match to protein family HMM TIGR02506; ribonucleoside-diphosphate reductase, alpha subunit complement(196267..198492) Gardnerella vaginalis 409-05 8709220 YP_003373442.1 CDS nrdI NC_013721.1 198578 199078 R identified by match to protein family HMM PF07972; match to protein family HMM TIGR00333; NrdI protein complement(198578..199078) Gardnerella vaginalis 409-05 8709444 YP_003373443.1 CDS HMPREF0424_0179 NC_013721.1 199082 199342 R identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194; glutaredoxin complement(199082..199342) Gardnerella vaginalis 409-05 8708872 YP_003373444.1 CDS gnd NC_013721.1 199768 201222 D identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00873; 6-phosphogluconate dehydrogenase, decarboxylating 199768..201222 Gardnerella vaginalis 409-05 8709587 YP_003373445.1 CDS HMPREF0424_0181 NC_013721.1 201312 202649 R hypothetical protein complement(201312..202649) Gardnerella vaginalis 409-05 8709230 YP_003373446.1 CDS HMPREF0424_0182 NC_013721.1 202697 202879 R hypothetical protein complement(202697..202879) Gardnerella vaginalis 409-05 8709714 YP_003373447.1 CDS pgl NC_013721.1 202930 203754 R identified by match to protein family HMM TIGR01198; 6-phosphogluconolactonase complement(202930..203754) Gardnerella vaginalis 409-05 8709026 YP_003373448.1 CDS HMPREF0424_0184 NC_013721.1 203809 204750 R putative OpcA protein complement(203809..204750) Gardnerella vaginalis 409-05 8709466 YP_003373449.1 CDS zwf NC_013721.1 204747 206327 R identified by match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871; glucose-6-phosphate dehydrogenase complement(204747..206327) Gardnerella vaginalis 409-05 8708861 YP_003373450.1 CDS HMPREF0424_0186 NC_013721.1 206431 208851 R identified by match to protein family HMM PF01757; hypothetical protein complement(206431..208851) Gardnerella vaginalis 409-05 8709413 YP_003373451.1 CDS ppa NC_013721.1 209173 209667 D identified by match to protein family HMM PF00719; inorganic diphosphatase 209173..209667 Gardnerella vaginalis 409-05 8709999 YP_003373452.1 CDS HMPREF0424_0188 NC_013721.1 209817 210608 R hypothetical protein complement(209817..210608) Gardnerella vaginalis 409-05 8709280 YP_003373453.1 CDS HMPREF0424_0189 NC_013721.1 210750 211640 D identified by match to protein family HMM PF00486; transcriptional regulatory protein, C-terminal domain protein 210750..211640 Gardnerella vaginalis 409-05 8709834 YP_003373454.1 CDS nth NC_013721.1 211640 212314 D identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 211640..212314 Gardnerella vaginalis 409-05 8709027 YP_003373455.1 CDS HMPREF0424_0191 NC_013721.1 212445 213932 D identified by match to protein family HMM PF00496; extracellular solute-binding protein 212445..213932 Gardnerella vaginalis 409-05 8709898 YP_003373456.1 CDS valS NC_013721.1 213981 216758 D identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; valine--tRNA ligase 213981..216758 Gardnerella vaginalis 409-05 8709302 YP_003373457.1 CDS HMPREF0424_0193 NC_013721.1 216854 217120 R identified by match to protein family HMM PF05016; match to protein family HMM TIGR02385; toxin-antitoxin system, toxin component, RelE family complement(216854..217120) Gardnerella vaginalis 409-05 8709864 YP_003373458.1 CDS HMPREF0424_0194 NC_013721.1 217104 217454 R toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein complement(217104..217454) Gardnerella vaginalis 409-05 8709211 YP_003373459.1 CDS argS NC_013721.1 217453 219249 D identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginine--tRNA ligase 217453..219249 Gardnerella vaginalis 409-05 8709604 YP_003373460.1 CDS brnQ NC_013721.1 219492 221063 D identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein 219492..221063 Gardnerella vaginalis 409-05 8709070 YP_003373461.1 CDS HMPREF0424_0197 NC_013721.1 221177 221524 R hypothetical protein complement(221177..221524) Gardnerella vaginalis 409-05 8709399 YP_003373462.1 CDS HMPREF0424_0198 NC_013721.1 221600 222115 D identified by match to protein family HMM PF04138; GtrA-like protein 221600..222115 Gardnerella vaginalis 409-05 8708878 YP_003373463.1 CDS HMPREF0424_0199 NC_013721.1 222150 222842 D identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 222150..222842 Gardnerella vaginalis 409-05 8709368 YP_003373464.1 CDS HMPREF0424_0200 NC_013721.1 222871 223839 D hypothetical protein 222871..223839 Gardnerella vaginalis 409-05 8709731 YP_003373465.1 CDS gltX NC_013721.1 223905 225458 D identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464; glutamate--tRNA ligase 223905..225458 Gardnerella vaginalis 409-05 8709566 YP_003373466.1 CDS HMPREF0424_0202 NC_013721.1 225507 225641 D identified by glimmer; putative; hypothetical protein 225507..225641 Gardnerella vaginalis 409-05 8709179 YP_003373467.1 CDS HMPREF0424_0205 NC_013721.1 226360 227652 D identified by match to protein family HMM PF00149; Ser/Thr phosphatase family protein 226360..227652 Gardnerella vaginalis 409-05 8710057 YP_003373468.1 CDS murA NC_013721.1 227744 229105 D identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 227744..229105 Gardnerella vaginalis 409-05 8708827 YP_003373469.1 CDS HMPREF0424_0207 NC_013721.1 229296 231209 D identified by match to protein family HMM PF00069; kinase domain protein 229296..231209 Gardnerella vaginalis 409-05 8709251 YP_003373470.1 CDS HMPREF0424_0208 NC_013721.1 231245 233578 D identified by glimmer; putative; hypothetical protein 231245..233578 Gardnerella vaginalis 409-05 8709002 YP_003373471.1 CDS HMPREF0424_0210 NC_013721.1 233856 234542 R identified by match to protein family HMM PF09335; hypothetical protein complement(233856..234542) Gardnerella vaginalis 409-05 8710054 YP_003373472.1 CDS HMPREF0424_0211 NC_013721.1 234770 235513 D hypothetical protein 234770..235513 Gardnerella vaginalis 409-05 8709569 YP_003373473.1 CDS rpsO NC_013721.1 235644 235913 D identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 235644..235913 Gardnerella vaginalis 409-05 8709021 YP_003373474.1 CDS gpsI NC_013721.1 236259 239039 D identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR02696; match to protein family HMM TIGR03591; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 236259..239039 Gardnerella vaginalis 409-05 8709739 YP_003373475.1 CDS HMPREF0424_0214 NC_013721.1 239286 240149 D identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family protein 239286..240149 Gardnerella vaginalis 409-05 8708780 YP_003373476.1 CDS HMPREF0424_0215 NC_013721.1 240164 241129 D identified by match to protein family HMM PF02578; hypothetical protein 240164..241129 Gardnerella vaginalis 409-05 8709338 YP_003373477.1 CDS HMPREF0424_0216 NC_013721.1 241306 242730 D hypothetical protein 241306..242730 Gardnerella vaginalis 409-05 8709885 YP_003373478.1 CDS HMPREF0424_0217 NC_013721.1 242842 244176 D identified by match to protein family HMM PF03051; peptidase C1-like protein 242842..244176 Gardnerella vaginalis 409-05 8709217 YP_003373479.1 CDS HMPREF0424_0218 NC_013721.1 244375 245556 D identified by match to protein family HMM PF00793; match to protein family HMM TIGR00034; 3-deoxy-7-phosphoheptulonate synthase 244375..245556 Gardnerella vaginalis 409-05 8709802 YP_003373480.1 CDS HMPREF0424_0219 NC_013721.1 245670 246167 D identified by glimmer; putative; hypothetical protein 245670..246167 Gardnerella vaginalis 409-05 8709257 YP_003373481.1 CDS mtnN NC_013721.1 246160 246870 D identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase 246160..246870 Gardnerella vaginalis 409-05 8708823 YP_003373482.1 CDS pstS NC_013721.1 247077 248303 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter substrate-binding protein 247077..248303 Gardnerella vaginalis 409-05 8709542 YP_003373483.1 CDS pstC NC_013721.1 248353 249357 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 248353..249357 Gardnerella vaginalis 409-05 8709688 YP_003373484.1 CDS pstA NC_013721.1 249358 250395 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 249358..250395 Gardnerella vaginalis 409-05 8709154 YP_003373485.1 CDS pstB NC_013721.1 250464 251243 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972; phosphate ABC transporter ATP-binding protein 250464..251243 Gardnerella vaginalis 409-05 8709045 YP_003373486.1 CDS HMPREF0424_0225 NC_013721.1 251497 252891 D identified by match to protein family HMM PF00860; purine transporter, AzgA family 251497..252891 Gardnerella vaginalis 409-05 8709445 YP_003373487.1 CDS rplJ NC_013721.1 253283 253804 D identified by match to protein family HMM PF00466; ribosomal protein L10 253283..253804 Gardnerella vaginalis 409-05 8709831 YP_003373488.1 CDS rplL NC_013721.1 253902 254282 D identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855; ribosomal protein L7/L12 253902..254282 Gardnerella vaginalis 409-05 8709456 YP_003373489.1 CDS HMPREF0424_0228 NC_013721.1 255160 256491 D identified by match to protein family HMM PF00498; FHA domain protein 255160..256491 Gardnerella vaginalis 409-05 8709384 YP_003373490.1 CDS HMPREF0424_0229 NC_013721.1 256512 260270 D hypothetical protein 256512..260270 Gardnerella vaginalis 409-05 8709164 YP_003373491.1 CDS HMPREF0424_0230 NC_013721.1 260267 260470 D hypothetical protein 260267..260470 Gardnerella vaginalis 409-05 8709737 YP_003373492.1 CDS HMPREF0424_0231 NC_013721.1 260602 261456 R identified by glimmer; putative; hypothetical protein complement(260602..261456) Gardnerella vaginalis 409-05 8709689 YP_003373493.1 CDS HMPREF0424_0232 NC_013721.1 261494 261670 R identified by match to protein family HMM PF09723; match to protein family HMM TIGR02605; regulatory protein, FmdB family complement(261494..261670) Gardnerella vaginalis 409-05 8708899 YP_003373494.1 CDS HMPREF0424_0233 NC_013721.1 261980 263062 D hypothetical protein 261980..263062 Gardnerella vaginalis 409-05 8709572 YP_003373495.1 CDS groS NC_013721.1 263235 263528 D identified by match to protein family HMM PF00166; chaperonin GroS 263235..263528 Gardnerella vaginalis 409-05 8708982 YP_003373496.1 CDS hisC NC_013721.1 263722 264819 D identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; histidinol-phosphate transaminase 263722..264819 Gardnerella vaginalis 409-05 8709507 YP_003373497.1 CDS rpmG NC_013721.1 265216 265386 D identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; ribosomal protein L33 265216..265386 Gardnerella vaginalis 409-05 8710064 YP_003373498.1 CDS HMPREF0424_0240 NC_013721.1 265511 266782 D identified by match to protein family HMM PF01565; match to protein family HMM PF02873; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain protein 265511..266782 Gardnerella vaginalis 409-05 8709403 YP_003373499.1 CDS HMPREF0424_0241 NC_013721.1 267073 268704 D identified by match to protein family HMM PF00324; amino acid permease 267073..268704 Gardnerella vaginalis 409-05 8709843 YP_003373500.1 CDS HMPREF0424_0242 NC_013721.1 268827 269159 D identified by match to protein family HMM PF00037; putative ferredoxin 1 268827..269159 Gardnerella vaginalis 409-05 8709600 YP_003373501.1 CDS HMPREF0424_0243 NC_013721.1 269194 270423 R identified by match to protein family HMM PF00817; ImpB/MucB/SamB family protein complement(269194..270423) Gardnerella vaginalis 409-05 8709998 YP_003373502.1 CDS HMPREF0424_0244 NC_013721.1 270614 271546 D identified by match to protein family HMM PF00892; hypothetical protein 270614..271546 Gardnerella vaginalis 409-05 8709132 YP_003373503.1 CDS HMPREF0424_0246 NC_013721.1 271843 271965 R identified by glimmer; putative; hypothetical protein complement(271843..271965) Gardnerella vaginalis 409-05 8710071 YP_003373504.1 CDS HMPREF0424_0247 NC_013721.1 272052 274901 D identified by glimmer; putative; hypothetical protein 272052..274901 Gardnerella vaginalis 409-05 8709030 YP_003373505.1 CDS HMPREF0424_0248 NC_013721.1 275085 275378 D identified by match to protein family HMM PF02583; hypothetical protein 275085..275378 Gardnerella vaginalis 409-05 8709372 YP_003373506.1 CDS HMPREF0424_0249 NC_013721.1 275394 276062 D identified by match to protein family HMM PF01205; match to protein family HMM PF09186; match to protein family HMM TIGR00257; hypothetical protein 275394..276062 Gardnerella vaginalis 409-05 8709779 YP_003373507.1 CDS HMPREF0424_0250 NC_013721.1 276073 276699 D hypothetical protein 276073..276699 Gardnerella vaginalis 409-05 8708952 YP_003373508.1 CDS malQ_1 NC_013721.1 276717 278882 D identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 276717..278882 Gardnerella vaginalis 409-05 8709815 YP_003373509.1 CDS rplM NC_013721.1 279143 279592 D identified by match to protein family HMM PF00572; match to protein family HMM TIGR01066; 50S ribosomal protein L13 279143..279592 Gardnerella vaginalis 409-05 8708828 YP_003373510.1 CDS rpsI NC_013721.1 279610 280098 D identified by match to protein family HMM PF00380; 30S ribosomal protein S9 279610..280098 Gardnerella vaginalis 409-05 8709406 YP_003373511.1 CDS adh NC_013721.1 280455 283160 D identified by match to protein family HMM PF00171; match to protein family HMM PF00465; aldehyde-alcohol dehydrogenase 2 280455..283160 Gardnerella vaginalis 409-05 8709223 YP_003373512.1 CDS rplC NC_013721.1 283809 284459 D identified by match to protein family HMM PF00297; match to protein family HMM TIGR03625; 50S ribosomal protein L3 283809..284459 Gardnerella vaginalis 409-05 8709991 YP_003373513.1 CDS rplD NC_013721.1 284465 285130 D identified by match to protein family HMM PF00573; ribosomal protein L4/L1 family protein 284465..285130 Gardnerella vaginalis 409-05 8709938 YP_003373514.1 CDS rplW NC_013721.1 285136 285432 D identified by match to protein family HMM PF00276; ribosomal protein L23 285136..285432 Gardnerella vaginalis 409-05 8708744 YP_003373515.1 CDS rplB NC_013721.1 285467 286297 D identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171; ribosomal protein L2 285467..286297 Gardnerella vaginalis 409-05 8709733 YP_003864087.1 CDS HMPREF0424_0258a NC_013721.1 286313 286591 D 30S ribosomal protein S19 286313..286591 Gardnerella vaginalis 409-05 9715066 YP_003373516.1 CDS rplV NC_013721.1 286608 286967 D identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 286608..286967 Gardnerella vaginalis 409-05 8709225 YP_003373517.1 CDS rpsC NC_013721.1 286970 287788 D identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009; 30S ribosomal protein S3 286970..287788 Gardnerella vaginalis 409-05 8709691 YP_003373518.1 CDS rplP NC_013721.1 287793 288212 D identified by match to protein family HMM PF00252; match to protein family HMM TIGR01164; 50S ribosomal protein L16 287793..288212 Gardnerella vaginalis 409-05 8709741 YP_003373519.1 CDS rpmC NC_013721.1 288212 288463 D identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; ribosomal protein L29 288212..288463 Gardnerella vaginalis 409-05 8709484 YP_004770524.1 CDS HMPREF0424_p1 NC_013721.1 288466 288732 D ribosomal protein S17 288466..288732 Gardnerella vaginalis 409-05 11031913 YP_004770525.1 CDS HMPREF0424_p2 NC_013721.1 288823 289191 D ribosomal protein L14 288823..289191 Gardnerella vaginalis 409-05 11031914 YP_003373520.1 CDS rplX NC_013721.1 289193 289528 D identified by match to protein family HMM PF00467; match to protein family HMM TIGR01079; ribosomal protein L24 289193..289528 Gardnerella vaginalis 409-05 8708985 YP_003373521.1 CDS HMPREF0424_0264 NC_013721.1 289525 290097 D identified by match to protein family HMM PF00281; match to protein family HMM PF00673; 50S ribosomal protein L5 289525..290097 Gardnerella vaginalis 409-05 8709277 YP_003864088.1 CDS HMPREF0424_0264a NC_013721.1 290099 290284 D 30S ribosomal protein S14 290099..290284 Gardnerella vaginalis 409-05 9715068 YP_003373522.1 CDS rpsH NC_013721.1 290371 290769 D identified by match to protein family HMM PF00410; 30S ribosomal protein S8 290371..290769 Gardnerella vaginalis 409-05 8709804 YP_003373523.1 CDS rplF NC_013721.1 290786 291325 D identified by match to protein family HMM PF00347; match to protein family HMM TIGR03654; 50S ribosomal protein L6 290786..291325 Gardnerella vaginalis 409-05 8709183 YP_003373524.1 CDS rplR NC_013721.1 291327 291698 D identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 291327..291698 Gardnerella vaginalis 409-05 8709853 YP_003373525.1 CDS rpsE NC_013721.1 291722 292423 D identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 291722..292423 Gardnerella vaginalis 409-05 8709344 YP_003373526.1 CDS rpmD NC_013721.1 292423 292605 D identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308; ribosomal protein L30 292423..292605 Gardnerella vaginalis 409-05 8709393 YP_003373527.1 CDS rplO NC_013721.1 292608 293063 D identified by match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 292608..293063 Gardnerella vaginalis 409-05 8709580 YP_003373528.1 CDS secY NC_013721.1 293258 294601 D identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967; preprotein translocase, SecY subunit 293258..294601 Gardnerella vaginalis 409-05 8709206 YP_003373529.1 CDS HMPREF0424_0272 NC_013721.1 294630 295190 D identified by match to protein family HMM PF00406; match to protein family HMM TIGR01351; adenylate kinase 294630..295190 Gardnerella vaginalis 409-05 8709709 YP_003373530.1 CDS rpmJ NC_013721.1 295572 295685 D ribosomal protein L36 295572..295685 Gardnerella vaginalis 409-05 8708883 YP_003373531.1 CDS rpsM NC_013721.1 295830 296207 D identified by match to protein family HMM PF00416; match to protein family HMM TIGR03631; 30S ribosomal protein S13 295830..296207 Gardnerella vaginalis 409-05 8709796 YP_003373532.1 CDS rpsK NC_013721.1 296291 296689 D identified by match to protein family HMM PF00411; match to protein family HMM TIGR03632; 30S ribosomal protein S11 296291..296689 Gardnerella vaginalis 409-05 8709424 YP_003373533.1 CDS rpoA NC_013721.1 296769 297764 D identified by match to protein family HMM PF01000; match to protein family HMM PF01193; match to protein family HMM PF03118; match to protein family HMM TIGR02027; DNA-directed RNA polymerase, alpha subunit 296769..297764 Gardnerella vaginalis 409-05 8709620 YP_003373534.1 CDS rplQ NC_013721.1 297842 298276 D identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059; ribosomal protein L17 297842..298276 Gardnerella vaginalis 409-05 8708771 YP_003373535.1 CDS HMPREF0424_0279 NC_013721.1 298404 299663 D hypothetical protein 298404..299663 Gardnerella vaginalis 409-05 8709513 YP_003373536.1 CDS truA NC_013721.1 299782 300699 D identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 299782..300699 Gardnerella vaginalis 409-05 8709172 YP_003373537.1 CDS HMPREF0424_0282 NC_013721.1 300907 301035 D identified by glimmer; putative; hypothetical protein 300907..301035 Gardnerella vaginalis 409-05 8710045 YP_003373538.1 CDS HMPREF0424_0283 NC_013721.1 301658 302659 R identified by glimmer; putative; hypothetical protein complement(301658..302659) Gardnerella vaginalis 409-05 8709433 YP_003373539.1 CDS nusA NC_013721.1 302831 303913 D identified by match to protein family HMM PF08529; match to protein family HMM TIGR01953; transcription termination factor NusA 302831..303913 Gardnerella vaginalis 409-05 8708838 YP_003373540.1 CDS infB NC_013721.1 304232 307096 D identified by match to protein family HMM PF00009; match to protein family HMM PF00071; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 304232..307096 Gardnerella vaginalis 409-05 8709621 YP_003373541.1 CDS rbfA NC_013721.1 307099 307653 D identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A 307099..307653 Gardnerella vaginalis 409-05 8708948 YP_003373542.1 CDS truB NC_013721.1 307702 308805 D identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431; tRNA pseudouridine synthase B 307702..308805 Gardnerella vaginalis 409-05 8709817 YP_003373543.1 CDS HMPREF0424_0288 NC_013721.1 308867 310111 D identified by match to protein family HMM PF01687; match to protein family HMM PF06574; riboflavin kinase 308867..310111 Gardnerella vaginalis 409-05 8708819 YP_003373544.1 CDS HMPREF0424_0289 NC_013721.1 310223 311266 D identified by match to protein family HMM PF03747; ADP-ribosylglycohydrolase 310223..311266 Gardnerella vaginalis 409-05 8709911 YP_003373545.1 CDS HMPREF0424_0290 NC_013721.1 311321 312445 D identified by match to protein family HMM PF00294; kinase, PfkB family 311321..312445 Gardnerella vaginalis 409-05 8709066 YP_003373546.1 CDS HMPREF0424_0291 NC_013721.1 312525 314048 D identified by match to protein family HMM PF02133; permease, cytosine/purine, uracil, thiamine, allantoin family 312525..314048 Gardnerella vaginalis 409-05 8709438 YP_003373547.1 CDS HMPREF0424_0292 NC_013721.1 314091 314648 D identified by match to protein family HMM PF00857; isochorismatase family protein 314091..314648 Gardnerella vaginalis 409-05 8709631 YP_003373548.1 CDS radA NC_013721.1 314677 316164 R identified by match to protein family HMM TIGR00416; DNA repair protein RadA complement(314677..316164) Gardnerella vaginalis 409-05 8709000 YP_003373549.1 CDS HMPREF0424_0294 NC_013721.1 316272 316928 D hypothetical protein 316272..316928 Gardnerella vaginalis 409-05 8709203 YP_003373550.1 CDS HMPREF0424_0295 NC_013721.1 317427 317711 D identified by glimmer; putative; hypothetical protein 317427..317711 Gardnerella vaginalis 409-05 8709738 YP_003373551.1 CDS rpiA NC_013721.1 317840 318538 R identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase A complement(317840..318538) Gardnerella vaginalis 409-05 8709034 YP_003373552.1 CDS rnhA NC_013721.1 318885 319970 R identified by match to protein family HMM PF00075; ribonuclease HI complement(318885..319970) Gardnerella vaginalis 409-05 8709392 YP_003373553.1 CDS pgm NC_013721.1 320006 321679 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01132; phosphoglucomutase, alpha-D-glucose phosphate-specific complement(320006..321679) Gardnerella vaginalis 409-05 8708877 YP_003373554.1 CDS HMPREF0424_0299 NC_013721.1 321715 322830 R identified by match to protein family HMM PF00781; diacylglycerol kinase catalytic domain (presumed) complement(321715..322830) Gardnerella vaginalis 409-05 8709270 YP_003373555.1 CDS HMPREF0424_0300 NC_013721.1 323221 325038 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG 323221..325038 Gardnerella vaginalis 409-05 8709056 YP_003373556.1 CDS HMPREF0424_0301 NC_013721.1 325047 326519 D hypothetical protein 325047..326519 Gardnerella vaginalis 409-05 8709436 YP_003373557.1 CDS HMPREF0424_0302 NC_013721.1 326633 329089 D identified by match to protein family HMM PF00326; match to protein family HMM PF02897; peptidase, S9A/B/C familie, catalytic domain protein 326633..329089 Gardnerella vaginalis 409-05 8709150 YP_003373558.1 CDS HMPREF0424_0303 NC_013721.1 329259 329969 D identified by match to protein family HMM PF00027; match to protein family HMM PF00325; cyclic nucleotide-binding domain protein 329259..329969 Gardnerella vaginalis 409-05 8709788 YP_003373559.1 CDS HMPREF0424_0304 NC_013721.1 330028 332349 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; transglycosylase 330028..332349 Gardnerella vaginalis 409-05 8709292 YP_003373560.1 CDS HMPREF0424_0305 NC_013721.1 332493 333647 R identified by match to protein family HMM PF01180; putative dihydroorotate oxidase complement(332493..333647) Gardnerella vaginalis 409-05 8709984 YP_003373561.1 CDS HMPREF0424_0307 NC_013721.1 335221 335784 D LPXTG-motif cell wall anchor domain protein 335221..335784 Gardnerella vaginalis 409-05 8709795 YP_003373562.1 CDS rpsF NC_013721.1 336198 336494 D identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; ribosomal protein S6 336198..336494 Gardnerella vaginalis 409-05 8708983 YP_003373563.1 CDS HMPREF0424_0309 NC_013721.1 336645 337226 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding family protein 336645..337226 Gardnerella vaginalis 409-05 8708818 YP_003373564.1 CDS rpsR NC_013721.1 337362 337610 D identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; ribosomal protein S18 337362..337610 Gardnerella vaginalis 409-05 8709283 YP_003373565.1 CDS rplI NC_013721.1 337627 338073 D identified by match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158; ribosomal protein L9 337627..338073 Gardnerella vaginalis 409-05 8709192 YP_003373566.1 CDS mvk NC_013721.1 338353 339555 D identified by match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR00549; mevalonate kinase 338353..339555 Gardnerella vaginalis 409-05 8708972 YP_003373567.1 CDS mvaD NC_013721.1 339691 340788 D identified by match to protein family HMM PF00288; match to protein family HMM TIGR01240; diphosphomevalonate decarboxylase 339691..340788 Gardnerella vaginalis 409-05 8709675 YP_003373568.1 CDS fni NC_013721.1 340798 343137 D identified by match to protein family HMM PF00288; match to protein family HMM PF01070; match to protein family HMM PF08544; match to protein family HMM TIGR01220; match to protein family HMM TIGR02151; isopentenyl-diphosphate delta-isomerase, type 2 340798..343137 Gardnerella vaginalis 409-05 8708789 YP_003373569.1 CDS rpmB NC_013721.1 343266 343460 D identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; ribosomal protein L28 343266..343460 Gardnerella vaginalis 409-05 8708835 YP_003373570.1 CDS HMPREF0424_0316 NC_013721.1 343612 345990 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; putative ATP-dependent DNA helicase RecG 343612..345990 Gardnerella vaginalis 409-05 8709514 YP_003373571.1 CDS HMPREF0424_0317 NC_013721.1 346280 347428 D identified by match to protein family HMM PF00294; match to protein family HMM PF08279; kinase, PfkB family 346280..347428 Gardnerella vaginalis 409-05 8709534 YP_003373572.1 CDS HMPREF0424_0318 NC_013721.1 347569 347694 D hypothetical protein 347569..347694 Gardnerella vaginalis 409-05 8709627 YP_003373573.1 CDS HMPREF0424_0319 NC_013721.1 347749 348687 D identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase 347749..348687 Gardnerella vaginalis 409-05 8709087 YP_003373574.1 CDS HMPREF0424_0320 NC_013721.1 348806 350230 D identified by match to protein family HMM PF07690; transporter, major facilitator family protein 348806..350230 Gardnerella vaginalis 409-05 8709932 YP_003373575.1 CDS HMPREF0424_0321 NC_013721.1 350485 351069 D identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; RNA methyltransferase, RsmD family 350485..351069 Gardnerella vaginalis 409-05 8709378 YP_003373576.1 CDS HMPREF0424_0322 NC_013721.1 351149 351367 R identified by glimmer; putative; hypothetical protein complement(351149..351367) Gardnerella vaginalis 409-05 8709367 YP_003373577.1 CDS trmD NC_013721.1 351785 352651 R identified by match to protein family HMM PF01746; tRNA (guanine-N(1)-)-methyltransferase complement(351785..352651) Gardnerella vaginalis 409-05 8708806 YP_003373578.1 CDS rimM NC_013721.1 352693 353292 R identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM complement(352693..353292) Gardnerella vaginalis 409-05 8709470 YP_003373579.1 CDS HMPREF0424_0325 NC_013721.1 353294 353527 R hypothetical protein complement(353294..353527) Gardnerella vaginalis 409-05 8708934 YP_003373580.1 CDS rpsP NC_013721.1 353530 354000 R identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; ribosomal protein S16 complement(353530..354000) Gardnerella vaginalis 409-05 8708935 YP_003373581.1 CDS HMPREF0424_0327 NC_013721.1 354117 355292 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(354117..355292) Gardnerella vaginalis 409-05 8709592 YP_003373582.1 CDS ffh NC_013721.1 355289 356959 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein complement(355289..356959) Gardnerella vaginalis 409-05 8709042 YP_003373583.1 CDS cysS NC_013721.1 357067 358833 R identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; cysteine--tRNA ligase complement(357067..358833) Gardnerella vaginalis 409-05 8709735 YP_003373584.1 CDS HMPREF0424_0330 NC_013721.1 359229 360566 D identified by match to protein family HMM PF04095; match to protein family HMM TIGR01513; putative nicotinate phosphoribosyltransferase 359229..360566 Gardnerella vaginalis 409-05 8709196 YP_003373585.1 CDS HMPREF0424_0331 NC_013721.1 360801 361130 D hypothetical protein 360801..361130 Gardnerella vaginalis 409-05 8709887 YP_003373586.1 CDS coaD NC_013721.1 361257 361805 D identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase 361257..361805 Gardnerella vaginalis 409-05 8709167 YP_003373587.1 CDS HMPREF0424_0333 NC_013721.1 361821 362858 D hypothetical protein 361821..362858 Gardnerella vaginalis 409-05 8709904 YP_003373588.1 CDS HMPREF0424_0334 NC_013721.1 362861 363490 D identified by match to protein family HMM PF02620; hypothetical protein 362861..363490 Gardnerella vaginalis 409-05 8709343 YP_003373589.1 CDS rpmF NC_013721.1 363615 363809 D identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; ribosomal protein L32 363615..363809 Gardnerella vaginalis 409-05 8708787 YP_003373590.1 CDS rnc NC_013721.1 363859 364587 R identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III complement(363859..364587) Gardnerella vaginalis 409-05 8709482 YP_003373591.1 CDS HMPREF0424_0337 NC_013721.1 364628 364768 R identified by glimmer; putative; hypothetical protein complement(364628..364768) Gardnerella vaginalis 409-05 8709824 YP_003373592.1 CDS HMPREF0424_0338 NC_013721.1 364825 366939 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 364825..366939 Gardnerella vaginalis 409-05 8709291 YP_003373593.1 CDS rph NC_013721.1 367006 367767 D identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966; tRNA nucleotidyltransferase 367006..367767 Gardnerella vaginalis 409-05 8710018 YP_003373594.1 CDS HMPREF0424_0340 NC_013721.1 367790 368476 D identified by match to protein family HMM PF01725; Ham1 family protein 367790..368476 Gardnerella vaginalis 409-05 8708875 YP_003373595.1 CDS pgi NC_013721.1 369067 370761 D identified by match to protein family HMM PF00342; glucose-6-phosphate isomerase 369067..370761 Gardnerella vaginalis 409-05 8710039 YP_003373596.1 CDS HMPREF0424_0345 NC_013721.1 371198 371344 D identified by glimmer; putative; hypothetical protein 371198..371344 Gardnerella vaginalis 409-05 8709578 YP_003373597.1 CDS HMPREF0424_0346 NC_013721.1 371604 373352 D identified by match to protein family HMM PF00528; ABC transporter permease 371604..373352 Gardnerella vaginalis 409-05 8708897 YP_003373598.1 CDS HMPREF0424_0347 NC_013721.1 373412 374947 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 373412..374947 Gardnerella vaginalis 409-05 8709964 YP_003373599.1 CDS rplS NC_013721.1 375195 375560 D identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024; ribosomal protein L19 375195..375560 Gardnerella vaginalis 409-05 8709274 YP_003373600.1 CDS lepB NC_013721.1 375590 376378 D identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 375590..376378 Gardnerella vaginalis 409-05 8709816 YP_003373601.1 CDS rnhB NC_013721.1 376513 377256 D identified by match to protein family HMM PF01351; ribonuclease HII 376513..377256 Gardnerella vaginalis 409-05 8708895 YP_003373602.1 CDS HMPREF0424_0351 NC_013721.1 377270 378373 D identified by match to protein family HMM PF00356; transcriptional regulator, LacI family 377270..378373 Gardnerella vaginalis 409-05 8709794 YP_003373603.1 CDS HMPREF0424_0352 NC_013721.1 378643 381198 D hypothetical protein 378643..381198 Gardnerella vaginalis 409-05 8709238 YP_003373604.1 CDS HMPREF0424_0353 NC_013721.1 381250 381960 D identified by match to protein family HMM PF09352; hypothetical protein 381250..381960 Gardnerella vaginalis 409-05 8709048 YP_003373605.1 CDS HMPREF0424_0354 NC_013721.1 382036 383664 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family protein complement(382036..383664) Gardnerella vaginalis 409-05 8709121 YP_003373606.1 CDS HMPREF0424_0355 NC_013721.1 383828 384814 R identified by match to protein family HMM PF07501; G5 domain protein complement(383828..384814) Gardnerella vaginalis 409-05 8708754 YP_003373607.1 CDS trxA NC_013721.1 384963 385304 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin complement(384963..385304) Gardnerella vaginalis 409-05 8709461 YP_003373608.1 CDS serS NC_013721.1 385411 386697 D identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; serine--tRNA ligase 385411..386697 Gardnerella vaginalis 409-05 8709281 YP_003373609.1 CDS HMPREF0424_0359 NC_013721.1 387350 388663 R identified by match to protein family HMM PF08540; putative hydroxymethylglutaryl-CoA synthase complement(387350..388663) Gardnerella vaginalis 409-05 8710053 YP_003373610.1 CDS HMPREF0424_0361 NC_013721.1 388578 388730 D identified by glimmer; putative; hypothetical protein 388578..388730 Gardnerella vaginalis 409-05 8709159 YP_003373611.1 CDS HMPREF0424_0360 NC_013721.1 388687 390021 R identified by match to protein family HMM TIGR00532; hydroxymethylglutaryl-CoA reductase, degradative complement(388687..390021) Gardnerella vaginalis 409-05 8709089 YP_003373612.1 CDS HMPREF0424_0362 NC_013721.1 390108 391370 R identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA C-acetyltransferase complement(390108..391370) Gardnerella vaginalis 409-05 8709275 YP_003373613.1 CDS HMPREF0424_0363 NC_013721.1 392005 392142 D identified by glimmer; putative; hypothetical protein 392005..392142 Gardnerella vaginalis 409-05 8709962 YP_003373614.1 CDS xpt NC_013721.1 392431 393012 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01744; xanthine phosphoribosyltransferase complement(392431..393012) Gardnerella vaginalis 409-05 8709008 YP_003373615.1 CDS HMPREF0424_0365 NC_013721.1 393202 396273 D identified by match to protein family HMM PF00580; putative ATP-dependent DNA helicase PcrA 393202..396273 Gardnerella vaginalis 409-05 8709855 YP_003373616.1 CDS HMPREF0424_0366 NC_013721.1 396416 396829 D hypothetical protein 396416..396829 Gardnerella vaginalis 409-05 8709625 YP_003373617.1 CDS HMPREF0424_0367 NC_013721.1 396868 398079 D identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein 396868..398079 Gardnerella vaginalis 409-05 8709005 YP_003373618.1 CDS HMPREF0424_0368 NC_013721.1 398082 398864 D identified by match to protein family HMM PF00005; putative lipoprotein releasing system, ATP-binding protein 398082..398864 Gardnerella vaginalis 409-05 8709465 YP_003373619.1 CDS rpsD NC_013721.1 399301 399927 D identified by match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017; 30S ribosomal protein S4 399301..399927 Gardnerella vaginalis 409-05 8708755 YP_003373620.1 CDS HMPREF0424_0370 NC_013721.1 399959 400072 D identified by glimmer; putative; hypothetical protein 399959..400072 Gardnerella vaginalis 409-05 8709799 YP_003373621.1 CDS HMPREF0424_0371 NC_013721.1 400120 400794 D identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 400120..400794 Gardnerella vaginalis 409-05 8709579 YP_003373622.1 CDS HMPREF0424_0372 NC_013721.1 400945 401391 D hypothetical protein 400945..401391 Gardnerella vaginalis 409-05 8709576 YP_003373623.1 CDS HMPREF0424_0373 NC_013721.1 401391 401636 D hypothetical protein 401391..401636 Gardnerella vaginalis 409-05 8709018 YP_003373624.1 CDS HMPREF0424_0374 NC_013721.1 401653 401766 R identified by glimmer; putative; hypothetical protein complement(401653..401766) Gardnerella vaginalis 409-05 8709105 YP_003373625.1 CDS alaS NC_013721.1 401843 404527 D identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanine--tRNA ligase 401843..404527 Gardnerella vaginalis 409-05 8709793 YP_003373626.1 CDS HMPREF0424_0376 NC_013721.1 404582 405040 D identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250; RNAse YqgF 404582..405040 Gardnerella vaginalis 409-05 8709787 YP_003373627.1 CDS HMPREF0424_0377 NC_013721.1 405086 406276 D identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein 405086..406276 Gardnerella vaginalis 409-05 8709232 YP_003373628.1 CDS HMPREF0424_0378 NC_013721.1 406449 406865 D identified by glimmer; putative; hypothetical protein 406449..406865 Gardnerella vaginalis 409-05 8709458 YP_003373629.1 CDS aroC NC_013721.1 406915 408102 D identified by match to protein family HMM PF01264; match to protein family HMM TIGR00033; chorismate synthase 406915..408102 Gardnerella vaginalis 409-05 8708746 YP_003373630.1 CDS aroB NC_013721.1 408099 409781 D identified by match to protein family HMM PF01202; match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase 408099..409781 Gardnerella vaginalis 409-05 8708763 YP_003373631.1 CDS aroQ NC_013721.1 409801 410256 D identified by match to protein family HMM PF01220; match to protein family HMM TIGR01088; 3-dehydroquinate dehydratase, type II 409801..410256 Gardnerella vaginalis 409-05 8708797 YP_003373632.1 CDS pyrG NC_013721.1 410319 412001 D identified by match to protein family HMM PF00117; match to protein family HMM PF06418; match to protein family HMM TIGR00337; CTP synthase 410319..412001 Gardnerella vaginalis 409-05 8708762 YP_003373633.1 CDS sufB NC_013721.1 412214 413872 D identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB 412214..413872 Gardnerella vaginalis 409-05 8709327 YP_003373634.1 CDS sufD NC_013721.1 413872 415119 D identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981; FeS assembly protein SufD 413872..415119 Gardnerella vaginalis 409-05 8709883 YP_003373635.1 CDS sufC NC_013721.1 415129 415905 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 415129..415905 Gardnerella vaginalis 409-05 8709141 YP_003373636.1 CDS sufS NC_013721.1 415982 417340 D identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; cysteine desulfurase, SufS family protein 415982..417340 Gardnerella vaginalis 409-05 8709207 YP_003373637.1 CDS HMPREF0424_0387 NC_013721.1 417427 418128 D identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; SUF system FeS assembly protein, NifU family 417427..418128 Gardnerella vaginalis 409-05 8709907 YP_003373638.1 CDS HMPREF0424_0388 NC_013721.1 418161 418634 D identified by match to protein family HMM PF01883; hypothetical protein 418161..418634 Gardnerella vaginalis 409-05 8709363 YP_003373639.1 CDS HMPREF0424_0390 NC_013721.1 418683 419378 D identified by glimmer; putative; hypothetical protein 418683..419378 Gardnerella vaginalis 409-05 8708814 YP_003373640.1 CDS HMPREF0424_0389 NC_013721.1 419375 420040 R hypothetical protein complement(419375..420040) Gardnerella vaginalis 409-05 8709019 YP_003373641.1 CDS HMPREF0424_0391 NC_013721.1 420040 422046 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(420040..422046) Gardnerella vaginalis 409-05 8708851 YP_003373642.1 CDS lysS NC_013721.1 422568 424265 D identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; lysine--tRNA ligase 422568..424265 Gardnerella vaginalis 409-05 8710062 YP_003373643.1 CDS HMPREF0424_0394 NC_013721.1 424421 425161 D identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; phosphoglycerate mutase 1 family protein 424421..425161 Gardnerella vaginalis 409-05 8708870 YP_003373644.1 CDS phoU NC_013721.1 425317 425997 R identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU complement(425317..425997) Gardnerella vaginalis 409-05 8709583 YP_003373645.1 CDS HMPREF0424_0396 NC_013721.1 426187 427455 D identified by match to protein family HMM PF02518; histidine kinase 426187..427455 Gardnerella vaginalis 409-05 8709434 YP_003373646.1 CDS HMPREF0424_0397 NC_013721.1 427514 427780 R hypothetical protein complement(427514..427780) Gardnerella vaginalis 409-05 8708876 YP_003373647.1 CDS HMPREF0424_0398 NC_013721.1 427966 429111 D identified by match to protein family HMM PF05257; CHAP domain protein 427966..429111 Gardnerella vaginalis 409-05 8709924 YP_003373648.1 CDS HMPREF0424_0399 NC_013721.1 429225 429947 D identified by match to protein family HMM PF00877; NlpC/P60 family protein 429225..429947 Gardnerella vaginalis 409-05 8709347 YP_003373649.1 CDS HMPREF0424_0400 NC_013721.1 430089 431114 D identified by match to protein family HMM PF00582; universal stress family protein 430089..431114 Gardnerella vaginalis 409-05 8709106 YP_003373650.1 CDS HMPREF0424_0401 NC_013721.1 431536 431688 D identified by glimmer; putative; hypothetical protein 431536..431688 Gardnerella vaginalis 409-05 8709915 YP_003373651.1 CDS HMPREF0424_0402 NC_013721.1 431803 433134 R identified by match to protein family HMM PF00534; glycosyltransferase, group 1 family protein complement(431803..433134) Gardnerella vaginalis 409-05 8708961 YP_003373652.1 CDS HMPREF0424_0403 NC_013721.1 433227 433646 R identified by match to protein family HMM PF02566; OsmC-like protein complement(433227..433646) Gardnerella vaginalis 409-05 8709778 YP_003373653.1 CDS thyA NC_013721.1 433798 434670 D identified by match to protein family HMM PF00303; match to protein family HMM TIGR03284; thymidylate synthase 433798..434670 Gardnerella vaginalis 409-05 8709043 YP_003373654.1 CDS folA NC_013721.1 434731 435390 D identified by match to protein family HMM PF00186; dihydrofolate reductase 434731..435390 Gardnerella vaginalis 409-05 8709567 YP_003373655.1 CDS HMPREF0424_0406 NC_013721.1 435437 435991 D identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 435437..435991 Gardnerella vaginalis 409-05 8708910 YP_003373656.1 CDS HMPREF0424_0407 NC_013721.1 436006 436194 D identified by glimmer; putative; hypothetical protein 436006..436194 Gardnerella vaginalis 409-05 8709428 YP_003373657.1 CDS HMPREF0424_0408 NC_013721.1 436260 437627 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; peptidase dimerization domain protein 436260..437627 Gardnerella vaginalis 409-05 8709334 YP_003373658.1 CDS HMPREF0424_0409 NC_013721.1 437836 438474 D hypothetical protein 437836..438474 Gardnerella vaginalis 409-05 8709906 YP_003373659.1 CDS HMPREF0424_0410 NC_013721.1 438604 439437 D hypothetical protein 438604..439437 Gardnerella vaginalis 409-05 8709598 YP_003373660.1 CDS HMPREF0424_0412 NC_013721.1 439880 440488 D integral membrane family protein 439880..440488 Gardnerella vaginalis 409-05 8709049 YP_003373661.1 CDS HMPREF0424_0414 NC_013721.1 440543 443230 D identified by match to protein family HMM PF00005; match to protein family HMM PF02361; cobalt transport protein 440543..443230 Gardnerella vaginalis 409-05 8709800 YP_003373662.1 CDS HMPREF0424_0413 NC_013721.1 443194 443343 R identified by glimmer; putative; hypothetical protein complement(443194..443343) Gardnerella vaginalis 409-05 8709457 YP_003373663.1 CDS HMPREF0424_0416 NC_013721.1 444149 445162 D identified by match to protein family HMM PF07751; Abi-like protein 444149..445162 Gardnerella vaginalis 409-05 8710044 YP_003373664.1 CDS HMPREF0424_0417 NC_013721.1 445334 445468 D hypothetical protein 445334..445468 Gardnerella vaginalis 409-05 8708759 YP_003373665.1 CDS HMPREF0424_0418 NC_013721.1 445896 451943 D identified by glimmer; putative; hypothetical protein 445896..451943 Gardnerella vaginalis 409-05 8709648 YP_003373666.1 CDS HMPREF0424_0419 NC_013721.1 451986 452141 D identified by glimmer; putative; hypothetical protein 451986..452141 Gardnerella vaginalis 409-05 8708984 YP_003373667.1 CDS HMPREF0424_0420 NC_013721.1 452203 453861 D identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain protein 452203..453861 Gardnerella vaginalis 409-05 8709656 YP_003373668.1 CDS HMPREF0424_0421 NC_013721.1 453907 454029 D identified by glimmer; putative; hypothetical protein 453907..454029 Gardnerella vaginalis 409-05 8709633 YP_003373669.1 CDS HMPREF0424_0422 NC_013721.1 454072 455217 D identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 454072..455217 Gardnerella vaginalis 409-05 8708777 YP_003373670.1 CDS HMPREF0424_0423 NC_013721.1 456120 462248 D identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280; PA domain protein 456120..462248 Gardnerella vaginalis 409-05 8709948 YP_003373671.1 CDS HMPREF0424_0424 NC_013721.1 462305 462430 R identified by glimmer; putative; hypothetical protein complement(462305..462430) Gardnerella vaginalis 409-05 8709234 YP_003373672.1 CDS HMPREF0424_0425 NC_013721.1 462642 465593 D identified by glimmer; putative; hypothetical protein 462642..465593 Gardnerella vaginalis 409-05 8709814 YP_003373673.1 CDS HMPREF0424_0426 NC_013721.1 465590 467326 D identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain protein 465590..467326 Gardnerella vaginalis 409-05 8709117 YP_003373674.1 CDS HMPREF0424_0427 NC_013721.1 467417 468514 D identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 467417..468514 Gardnerella vaginalis 409-05 8709078 YP_003373675.1 CDS xseA NC_013721.1 469422 470897 D identified by match to protein family HMM PF01336; match to protein family HMM PF02601; match to protein family HMM TIGR00237; exodeoxyribonuclease VII, large subunit 469422..470897 Gardnerella vaginalis 409-05 8710051 YP_003373676.1 CDS xseB NC_013721.1 470946 471266 D identified by match to protein family HMM PF02609; exodeoxyribonuclease VII, small subunit 470946..471266 Gardnerella vaginalis 409-05 8709491 YP_003373677.1 CDS HMPREF0424_0432 NC_013721.1 471585 472667 D identified by match to protein family HMM PF07751; Abi-like protein 471585..472667 Gardnerella vaginalis 409-05 8710036 YP_003373678.1 CDS ileS NC_013721.1 473014 476424 D identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392; isoleucine--tRNA ligase 473014..476424 Gardnerella vaginalis 409-05 8709307 YP_003373679.1 CDS HMPREF0424_0434 NC_013721.1 476500 476763 R putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein complement(476500..476763) Gardnerella vaginalis 409-05 8709508 YP_003373680.1 CDS HMPREF0424_0435 NC_013721.1 476741 477016 R identified by match to protein family HMM PF04365; putative toxin-antitoxin system, toxin component complement(476741..477016) Gardnerella vaginalis 409-05 8708792 YP_003373681.1 CDS HMPREF0424_0436 NC_013721.1 477356 478285 D identified by match to protein family HMM PF00528; putative oligopeptide ABC transporter, permease protein OppC 477356..478285 Gardnerella vaginalis 409-05 8709630 YP_003373682.1 CDS HMPREF0424_0437 NC_013721.1 478282 479478 D identified by match to protein family HMM PF00528; putative dipeptide ABC transporter, permease protein DppB 478282..479478 Gardnerella vaginalis 409-05 8708993 YP_003373683.1 CDS HMPREF0424_0438 NC_013721.1 479652 481361 D identified by match to protein family HMM PF00496; extracellular solute-binding protein 479652..481361 Gardnerella vaginalis 409-05 8709095 YP_003373684.1 CDS HMPREF0424_0439 NC_013721.1 481368 483029 D identified by match to protein family HMM PF00005; match to protein family HMM PF08352; ABC transporter ATP-binding protein 481368..483029 Gardnerella vaginalis 409-05 8709685 YP_003373685.1 CDS murI NC_013721.1 483092 483862 D identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067; glutamate racemase 483092..483862 Gardnerella vaginalis 409-05 8709263 YP_003373686.1 CDS HMPREF0424_0441 NC_013721.1 483903 484553 R identified by match to protein family HMM PF07884; vitamin K epoxide reductase family protein complement(483903..484553) Gardnerella vaginalis 409-05 8709785 YP_003373687.1 CDS HMPREF0424_0442 NC_013721.1 484621 485586 D identified by match to protein family HMM PF02811; PHP domain protein 484621..485586 Gardnerella vaginalis 409-05 8708793 YP_003373688.1 CDS HMPREF0424_0443 NC_013721.1 485648 485866 R hypothetical protein complement(485648..485866) Gardnerella vaginalis 409-05 8710011 YP_003373689.1 CDS HMPREF0424_0444 NC_013721.1 485930 487726 R hypothetical protein complement(485930..487726) Gardnerella vaginalis 409-05 8709790 YP_003373690.1 CDS HMPREF0424_0445 NC_013721.1 487816 489363 D identified by match to protein family HMM PF00580; UvrD/REP helicase 487816..489363 Gardnerella vaginalis 409-05 8709086 YP_003373691.1 CDS HMPREF0424_0446 NC_013721.1 489518 491296 R identified by match to protein family HMM TIGR03624; putative hydrolase complement(489518..491296) Gardnerella vaginalis 409-05 8709060 YP_003373692.1 CDS HMPREF0424_0447 NC_013721.1 491557 492444 D PDZ domain family protein 491557..492444 Gardnerella vaginalis 409-05 8709616 YP_003373693.1 CDS HMPREF0424_0449 NC_013721.1 492681 494192 D identified by match to protein family HMM TIGR03543; match to protein family HMM TIGR03544; DivIVA domain repeat protein 492681..494192 Gardnerella vaginalis 409-05 8710038 YP_003373694.1 CDS recO NC_013721.1 494224 494970 D identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613; DNA repair protein RecO 494224..494970 Gardnerella vaginalis 409-05 8709076 YP_003373695.1 CDS uppS NC_013721.1 494973 495767 D identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; di-trans,poly-cis-decaprenylcistransferase 494973..495767 Gardnerella vaginalis 409-05 8709968 YP_003373696.1 CDS HMPREF0424_0452 NC_013721.1 495785 497017 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase complement(495785..497017) Gardnerella vaginalis 409-05 8708881 YP_003373697.1 CDS HMPREF0424_0453 NC_013721.1 497092 497457 R identified by match to protein family HMM PF01910; match to protein family HMM TIGR00106; hypothetical protein complement(497092..497457) Gardnerella vaginalis 409-05 8709174 YP_003373698.1 CDS glyS NC_013721.1 497638 499158 D identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00389; glycine--tRNA ligase 497638..499158 Gardnerella vaginalis 409-05 8709749 YP_003373699.1 CDS HMPREF0424_0455 NC_013721.1 499243 500397 D identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; TIM-barrel protein, nifR3 family 499243..500397 Gardnerella vaginalis 409-05 8709208 YP_003373700.1 CDS ftsZ NC_013721.1 500600 501814 D identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ 500600..501814 Gardnerella vaginalis 409-05 8709718 YP_003373701.1 CDS HMPREF0424_0457 NC_013721.1 501839 502297 D identified by match to protein family HMM PF04472; cell division family protein 501839..502297 Gardnerella vaginalis 409-05 8709348 YP_003373702.1 CDS trmB NC_013721.1 502456 503274 D identified by match to protein family HMM PF02390; match to protein family HMM TIGR00091; tRNA (guanine-N(7)-)-methyltransferase 502456..503274 Gardnerella vaginalis 409-05 8709873 YP_003373703.1 CDS HMPREF0424_0460 NC_013721.1 503637 504431 D hypothetical protein 503637..504431 Gardnerella vaginalis 409-05 8710075 YP_003373704.1 CDS HMPREF0424_0462 NC_013721.1 504699 505601 R identified by match to protein family HMM PF00294; kinase, PfkB family complement(504699..505601) Gardnerella vaginalis 409-05 8710060 YP_003373705.1 CDS HMPREF0424_0463 NC_013721.1 505887 507482 R identified by match to protein family HMM PF00557; peptidase, M24 family complement(505887..507482) Gardnerella vaginalis 409-05 8709594 YP_003373706.1 CDS folC NC_013721.1 507761 509218 D identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; bifunctional protein FolC 507761..509218 Gardnerella vaginalis 409-05 8708963 YP_003373707.1 CDS HMPREF0424_0465 NC_013721.1 509236 509964 R identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035; aspartate racemase complement(509236..509964) Gardnerella vaginalis 409-05 8709674 YP_003373708.1 CDS HMPREF0424_0466 NC_013721.1 510000 511241 R hypothetical protein complement(510000..511241) Gardnerella vaginalis 409-05 8709155 YP_003373709.1 CDS murE NC_013721.1 511376 513175 R identified by match to protein family HMM PF02875; match to protein family HMM PF08245; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase complement(511376..513175) Gardnerella vaginalis 409-05 8709146 YP_003373710.1 CDS HMPREF0424_0468 NC_013721.1 513207 513986 R identified by match to protein family HMM PF00929; exonuclease complement(513207..513986) Gardnerella vaginalis 409-05 8709676 YP_003373711.1 CDS HMPREF0424_0469 NC_013721.1 514136 514813 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; sigma-70 region 2 514136..514813 Gardnerella vaginalis 409-05 8709001 YP_003373712.1 CDS ybaK NC_013721.1 515094 515594 R identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; YbaK/ebsC protein complement(515094..515594) Gardnerella vaginalis 409-05 8709494 YP_003373713.1 CDS HMPREF0424_0471 NC_013721.1 515773 516861 R identified by match to protein family HMM PF02800; glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain protein complement(515773..516861) Gardnerella vaginalis 409-05 8709543 YP_003373714.1 CDS HMPREF0424_0473 NC_013721.1 517199 518017 R identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378; thiamine diphosphokinase complement(517199..518017) Gardnerella vaginalis 409-05 8708837 YP_003373715.1 CDS asnB NC_013721.1 518296 520182 D identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase (glutamine-hydrolyzing) 518296..520182 Gardnerella vaginalis 409-05 8709606 YP_003373716.1 CDS infC NC_013721.1 520413 521174 D identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 520413..521174 Gardnerella vaginalis 409-05 8709072 YP_003373717.1 CDS rpmI NC_013721.1 521155 521349 D identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; ribosomal protein L35 521155..521349 Gardnerella vaginalis 409-05 8709091 YP_003373718.1 CDS rplT NC_013721.1 521417 521800 D identified by match to protein family HMM PF00453; match to protein family HMM TIGR01032; ribosomal protein L20 521417..521800 Gardnerella vaginalis 409-05 8709156 YP_003373719.1 CDS xerD NC_013721.1 521895 522854 D identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225; tyrosine recombinase XerD 521895..522854 Gardnerella vaginalis 409-05 8709859 YP_003373720.1 CDS HMPREF0424_0479 NC_013721.1 522903 523742 D identified by match to protein family HMM PF01656; putative sporulation initiation inhibitor protein Soj 522903..523742 Gardnerella vaginalis 409-05 8708813 YP_003373721.1 CDS typA NC_013721.1 523933 525858 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 523933..525858 Gardnerella vaginalis 409-05 8710019 YP_003373722.1 CDS HMPREF0424_0481 NC_013721.1 525983 526309 D hypothetical protein 525983..526309 Gardnerella vaginalis 409-05 8709510 YP_003373723.1 CDS HMPREF0424_0482 NC_013721.1 526447 527442 D identified by match to protein family HMM PF00800; prephenate dehydratase 526447..527442 Gardnerella vaginalis 409-05 8708788 YP_003373724.1 CDS HMPREF0424_0483 NC_013721.1 527436 528521 D identified by match to protein family HMM PF02153; match to protein family HMM PF03446; prephenate dehydrogenase 527436..528521 Gardnerella vaginalis 409-05 8709101 YP_003373725.1 CDS HMPREF0424_0484 NC_013721.1 528545 528838 R hypothetical protein complement(528545..528838) Gardnerella vaginalis 409-05 8709099 YP_003373726.1 CDS xerC NC_013721.1 528924 529892 D identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific tyrosine recombinase XerC 528924..529892 Gardnerella vaginalis 409-05 8709539 YP_003373727.1 CDS HMPREF0424_0486 NC_013721.1 530279 531907 D identified by match to protein family HMM PF00496; extracellular solute-binding protein 530279..531907 Gardnerella vaginalis 409-05 8708938 YP_003373728.1 CDS HMPREF0424_0487 NC_013721.1 532109 533035 D identified by match to protein family HMM PF00528; putative dipeptide ABC transporter, permease protein DppB 532109..533035 Gardnerella vaginalis 409-05 8708825 YP_003373729.1 CDS HMPREF0424_0488 NC_013721.1 533048 534040 D identified by match to protein family HMM PF00528; putative oligopeptide ABC transporter, permease protein OppC 533048..534040 Gardnerella vaginalis 409-05 8709522 YP_003373730.1 CDS HMPREF0424_0489 NC_013721.1 534065 536089 D identified by match to protein family HMM PF00005; match to protein family HMM PF08352; putative phosphonate C-P lyase system protein PhnK 534065..536089 Gardnerella vaginalis 409-05 8708810 YP_003373731.1 CDS HMPREF0424_0490 NC_013721.1 536269 537135 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00633; putative exodeoxyribonuclease III 536269..537135 Gardnerella vaginalis 409-05 8709362 YP_003373732.1 CDS HMPREF0424_0491 NC_013721.1 537315 538079 D hypothetical protein 537315..538079 Gardnerella vaginalis 409-05 8708924 YP_003373733.1 CDS HMPREF0424_0492 NC_013721.1 538104 538925 D hypothetical protein 538104..538925 Gardnerella vaginalis 409-05 8709467 YP_003373734.1 CDS HMPREF0424_0493 NC_013721.1 538963 540378 D identified by match to protein family HMM PF05958; TRAM domain protein 538963..540378 Gardnerella vaginalis 409-05 8709226 YP_003373735.1 CDS HMPREF0424_0494 NC_013721.1 540703 541668 D identified by match to protein family HMM PF00239; match to protein family HMM PF07508; resolvase, N-terminal domain protein 540703..541668 Gardnerella vaginalis 409-05 8709311 YP_003373736.1 CDS HMPREF0424_0495 NC_013721.1 541658 542302 D hypothetical protein 541658..542302 Gardnerella vaginalis 409-05 8709624 YP_003373737.1 CDS HMPREF0424_0496 NC_013721.1 542843 543121 D identified by glimmer; putative; hypothetical protein 542843..543121 Gardnerella vaginalis 409-05 8708785 YP_003373738.1 CDS HMPREF0424_0497 NC_013721.1 543193 544764 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 543193..544764 Gardnerella vaginalis 409-05 8709139 YP_003373739.1 CDS HMPREF0424_0498 NC_013721.1 545245 545679 D cytidine/deoxycytidylate deaminase family protein 545245..545679 Gardnerella vaginalis 409-05 8709852 YP_003373740.1 CDS HMPREF0424_0499 NC_013721.1 545778 546722 D hypothetical protein 545778..546722 Gardnerella vaginalis 409-05 8709286 YP_003373741.1 CDS HMPREF0424_0500 NC_013721.1 547461 547754 D hypothetical protein 547461..547754 Gardnerella vaginalis 409-05 8709989 YP_003373742.1 CDS HMPREF0424_0501 NC_013721.1 547751 547924 D identified by glimmer; putative; hypothetical protein 547751..547924 Gardnerella vaginalis 409-05 8709261 YP_003373743.1 CDS HMPREF0424_0502 NC_013721.1 548204 548665 D identified by glimmer; putative; hypothetical protein 548204..548665 Gardnerella vaginalis 409-05 8709471 YP_003373744.1 CDS HMPREF0424_0503 NC_013721.1 548678 549229 D identified by glimmer; putative; hypothetical protein 548678..549229 Gardnerella vaginalis 409-05 8708743 YP_003373745.1 CDS HMPREF0424_0504 NC_013721.1 549417 550070 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM PF08281; transcriptional regulator, LuxR family 549417..550070 Gardnerella vaginalis 409-05 8709942 YP_003373746.1 CDS HMPREF0424_0505 NC_013721.1 550105 551277 D identified by glimmer; putative; hypothetical protein 550105..551277 Gardnerella vaginalis 409-05 8709379 YP_003373747.1 CDS HMPREF0424_0506 NC_013721.1 551368 551583 D identified by glimmer; putative; hypothetical protein 551368..551583 Gardnerella vaginalis 409-05 8709705 YP_003373748.1 CDS HMPREF0424_0507 NC_013721.1 551580 551849 D identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; addiction module antitoxin, RelB/DinJ family 551580..551849 Gardnerella vaginalis 409-05 8709577 YP_003373749.1 CDS HMPREF0424_0508 NC_013721.1 551842 552117 D identified by match to protein family HMM TIGR02385; toxin-antitoxin system, toxin component, RelE family 551842..552117 Gardnerella vaginalis 409-05 8709031 YP_003373750.1 CDS HMPREF0424_0509 NC_013721.1 552238 552972 R identified by match to protein family HMM PF00665; putative transposase InsK for insertion sequence IS150 complement(552238..552972) Gardnerella vaginalis 409-05 8709723 YP_003373751.1 CDS HMPREF0424_0510 NC_013721.1 553742 554134 D hypothetical protein 553742..554134 Gardnerella vaginalis 409-05 8709177 YP_003373752.1 CDS HMPREF0424_0511 NC_013721.1 555423 556055 D identified by match to protein family HMM PF01381; DNA-binding protein 555423..556055 Gardnerella vaginalis 409-05 8709014 YP_003373753.1 CDS HMPREF0424_0512 NC_013721.1 556792 557046 R identified by match to protein family HMM TIGR01552; toxin-antitoxin system, antitoxin component, PHD family complement(556792..557046) Gardnerella vaginalis 409-05 8708921 YP_003373754.1 CDS HMPREF0424_0513 NC_013721.1 557174 557320 D identified by glimmer; putative; hypothetical protein 557174..557320 Gardnerella vaginalis 409-05 8709374 YP_003373755.1 CDS HMPREF0424_0514 NC_013721.1 557357 558343 D identified by match to protein family HMM PF01381; DNA-binding protein 557357..558343 Gardnerella vaginalis 409-05 8709914 YP_003373756.1 CDS HMPREF0424_0515 NC_013721.1 558365 558601 D hypothetical protein 558365..558601 Gardnerella vaginalis 409-05 8709212 YP_003373757.1 CDS HMPREF0424_0516 NC_013721.1 558850 559251 R hypothetical protein complement(558850..559251) Gardnerella vaginalis 409-05 8709533 YP_003373758.1 CDS HMPREF0424_0517 NC_013721.1 559248 559451 R identified by match to protein family HMM PF01381; DNA-binding protein complement(559248..559451) Gardnerella vaginalis 409-05 8709006 YP_003373759.1 CDS HMPREF0424_0518 NC_013721.1 559651 559947 D identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein 559651..559947 Gardnerella vaginalis 409-05 8709679 YP_003373760.1 CDS HMPREF0424_0519 NC_013721.1 559953 560069 D identified by glimmer; putative; hypothetical protein 559953..560069 Gardnerella vaginalis 409-05 8709754 YP_003373761.1 CDS HMPREF0424_0520 NC_013721.1 560371 560943 D putative lipoprotein 560371..560943 Gardnerella vaginalis 409-05 8709163 YP_003373762.1 CDS HMPREF0424_0521 NC_013721.1 561247 561378 D identified by glimmer; putative; hypothetical protein 561247..561378 Gardnerella vaginalis 409-05 8709939 YP_003373763.1 CDS HMPREF0424_0522 NC_013721.1 561644 561946 D identified by glimmer; putative; hypothetical protein 561644..561946 Gardnerella vaginalis 409-05 8709442 YP_003373764.1 CDS HMPREF0424_0523 NC_013721.1 562361 563467 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 562361..563467 Gardnerella vaginalis 409-05 8709063 YP_003373765.1 CDS HMPREF0424_0524 NC_013721.1 563478 564257 D hypothetical protein 563478..564257 Gardnerella vaginalis 409-05 8709068 YP_003373766.1 CDS HMPREF0424_0525 NC_013721.1 564254 565192 D identified by match to protein family HMM PF01061; ABC transporter 564254..565192 Gardnerella vaginalis 409-05 8709448 YP_003373767.1 CDS HMPREF0424_0526 NC_013721.1 565361 565489 D hypothetical protein 565361..565489 Gardnerella vaginalis 409-05 8708912 YP_003373768.1 CDS HMPREF0424_0527 NC_013721.1 566219 566431 D hypothetical protein 566219..566431 Gardnerella vaginalis 409-05 8709910 YP_003373769.1 CDS HMPREF0424_0528 NC_013721.1 566505 566996 D hypothetical protein 566505..566996 Gardnerella vaginalis 409-05 8709941 YP_003373770.1 CDS HMPREF0424_0529 NC_013721.1 567016 567645 D identified by glimmer; putative; hypothetical protein 567016..567645 Gardnerella vaginalis 409-05 8709383 YP_003373771.1 CDS HMPREF0424_0530 NC_013721.1 568193 569491 D identified by glimmer; putative; hypothetical protein 568193..569491 Gardnerella vaginalis 409-05 8709775 YP_003373772.1 CDS HMPREF0424_0531 NC_013721.1 569761 569940 D hypothetical protein 569761..569940 Gardnerella vaginalis 409-05 8709228 YP_003373773.1 CDS HMPREF0424_0533 NC_013721.1 570996 571181 D identified by match to protein family HMM TIGR01764; DNA binding domain, excisionase family 570996..571181 Gardnerella vaginalis 409-05 8708844 YP_003373774.1 CDS HMPREF0424_0534 NC_013721.1 571208 571927 D identified by match to protein family HMM PF01555; DNA (cytosine-5-)-methyltransferase 571208..571927 Gardnerella vaginalis 409-05 8708916 YP_003373775.1 CDS dcm_2 NC_013721.1 571928 573001 D identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; DNA (cytosine-5-)-methyltransferase 571928..573001 Gardnerella vaginalis 409-05 8709841 YP_003373776.1 CDS HMPREF0424_0536 NC_013721.1 572994 574955 D identified by match to protein family HMM PF07728; ATPase family associated with various cellular activities (AAA) 572994..574955 Gardnerella vaginalis 409-05 8709317 YP_003373777.1 CDS HMPREF0424_0537 NC_013721.1 574969 576345 D LlaJI restriction endonuclease 574969..576345 Gardnerella vaginalis 409-05 8709133 YP_003373778.1 CDS HMPREF0424_0539 NC_013721.1 577204 577344 D identified by glimmer; putative; hypothetical protein 577204..577344 Gardnerella vaginalis 409-05 8708854 YP_003373779.1 CDS HMPREF0424_0540 NC_013721.1 577846 578583 D identified by glimmer; putative; hypothetical protein 577846..578583 Gardnerella vaginalis 409-05 8709677 YP_003373780.1 CDS HMPREF0424_0541 NC_013721.1 578596 580161 D identified by match to protein family HMM PF09479; match to protein family HMM TIGR01167; match to protein family HMM TIGR02543; hypothetical protein 578596..580161 Gardnerella vaginalis 409-05 8709943 YP_003373781.1 CDS HMPREF0424_0543 NC_013721.1 581409 582671 D identified by match to protein family HMM PF02624; YcaO-like protein 581409..582671 Gardnerella vaginalis 409-05 8709385 YP_003373782.1 CDS HMPREF0424_0544 NC_013721.1 582694 584007 D hypothetical protein 582694..584007 Gardnerella vaginalis 409-05 8709933 YP_003373783.1 CDS HMPREF0424_0545 NC_013721.1 584190 590279 D identified by match to protein family HMM PF01468; match to protein family HMM PF07554; GA module 584190..590279 Gardnerella vaginalis 409-05 8709365 YP_003373784.1 CDS HMPREF0424_0546 NC_013721.1 590404 590550 D hypothetical protein 590404..590550 Gardnerella vaginalis 409-05 8709742 YP_003373785.1 CDS HMPREF0424_0547 NC_013721.1 590708 591964 D identified by match to protein family HMM PF00375; transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein 590708..591964 Gardnerella vaginalis 409-05 8708839 YP_003373786.1 CDS cysK NC_013721.1 593098 594030 R identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A complement(593098..594030) Gardnerella vaginalis 409-05 8708994 YP_003373787.1 CDS HMPREF0424_0550 NC_013721.1 594686 595108 D identified by match to protein family HMM PF00583; acetyltransferase, GNAT family 594686..595108 Gardnerella vaginalis 409-05 8709673 YP_003373788.1 CDS HMPREF0424_0551 NC_013721.1 595255 596064 D phosphorylase, Pnp/Udp family 595255..596064 Gardnerella vaginalis 409-05 8709231 YP_003373789.1 CDS HMPREF0424_0552 NC_013721.1 596307 598073 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 596307..598073 Gardnerella vaginalis 409-05 8708968 YP_003373790.1 CDS HMPREF0424_0553 NC_013721.1 598344 598487 D identified by glimmer; putative; hypothetical protein 598344..598487 Gardnerella vaginalis 409-05 8709245 YP_003373791.1 CDS HMPREF0424_0554 NC_013721.1 598514 599500 D identified by glimmer; putative; hypothetical protein 598514..599500 Gardnerella vaginalis 409-05 8709956 YP_003373792.1 CDS HMPREF0424_0555 NC_013721.1 599581 600159 D identified by match to protein family HMM PF04011; LemA family protein 599581..600159 Gardnerella vaginalis 409-05 8708779 YP_003373793.1 CDS HMPREF0424_0556 NC_013721.1 600350 600940 D hypothetical protein 600350..600940 Gardnerella vaginalis 409-05 8709485 YP_003373794.1 CDS HMPREF0424_0557 NC_013721.1 600937 601794 D identified by match to protein family HMM PF08843; hypothetical protein 600937..601794 Gardnerella vaginalis 409-05 8708809 YP_003373795.1 CDS HMPREF0424_0558 NC_013721.1 602024 603364 R identified by match to protein family HMM PF03553; match to protein family HMM PF03600; match to protein family HMM PF06808; Na+/H+ antiporter family protein complement(602024..603364) Gardnerella vaginalis 409-05 8709680 YP_003373796.1 CDS HMPREF0424_0559 NC_013721.1 603898 604674 D identified by glimmer; putative; hypothetical protein 603898..604674 Gardnerella vaginalis 409-05 8709774 YP_003373797.1 CDS HMPREF0424_0560 NC_013721.1 604664 606742 D identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; YhgE/Pip C-terminal domain protein 604664..606742 Gardnerella vaginalis 409-05 8709222 YP_003373798.1 CDS HMPREF0424_0561 NC_013721.1 606851 607984 R identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-dependent complement(606851..607984) Gardnerella vaginalis 409-05 8708847 YP_003373799.1 CDS HMPREF0424_0562 NC_013721.1 608171 609511 R identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase complement(608171..609511) Gardnerella vaginalis 409-05 8709316 YP_003373800.1 CDS HMPREF0424_0563 NC_013721.1 609846 610451 D identified by match to protein family HMM PF01470; putative pyroglutamyl-peptidase I 609846..610451 Gardnerella vaginalis 409-05 8709483 YP_003373801.1 CDS HMPREF0424_0564 NC_013721.1 610514 610957 R identified by match to protein family HMM PF05534; toxin-antitoxin system, antitoxin component, HicB family complement(610514..610957) Gardnerella vaginalis 409-05 8709640 YP_003373802.1 CDS HMPREF0424_0566 NC_013721.1 611663 612529 D hypothetical protein 611663..612529 Gardnerella vaginalis 409-05 8708748 YP_003373803.1 CDS HMPREF0424_0567 NC_013721.1 612701 613492 D identified by glimmer; putative; hypothetical protein 612701..613492 Gardnerella vaginalis 409-05 8709529 YP_003373804.1 CDS HMPREF0424_0568 NC_013721.1 613482 616082 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; E1-E2 ATPase 613482..616082 Gardnerella vaginalis 409-05 8709301 YP_003373805.1 CDS HMPREF0424_0569 NC_013721.1 616111 617688 D identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; L-serine ammonia-lyase 616111..617688 Gardnerella vaginalis 409-05 8709997 YP_003373806.1 CDS HMPREF0424_0570 NC_013721.1 617969 618376 D identified by match to protein family HMM PF00254; peptidyl-prolyl cis-trans isomerase, FKBP-type 617969..618376 Gardnerella vaginalis 409-05 8709296 YP_003373807.1 CDS HMPREF0424_0571 NC_013721.1 618448 618927 D identified by match to protein family HMM PF01272; match to protein family HMM PF03449; prokaryotic transcription elongation factor, GreA/GreB, N-terminal domain protein 618448..618927 Gardnerella vaginalis 409-05 8709505 YP_003373808.1 CDS lexA NC_013721.1 619055 619789 R identified by match to protein family HMM PF00717; match to protein family HMM PF01726; match to protein family HMM TIGR00498; repressor LexA complement(619055..619789) Gardnerella vaginalis 409-05 8709151 YP_003373809.1 CDS lysM NC_013721.1 619947 620324 D identified by match to protein family HMM PF01476; LysM domain protein 619947..620324 Gardnerella vaginalis 409-05 8709698 YP_003373810.1 CDS HMPREF0424_0574 NC_013721.1 620361 620486 D identified by glimmer; putative; hypothetical protein 620361..620486 Gardnerella vaginalis 409-05 8708999 YP_003373811.1 CDS nrdR NC_013721.1 620557 621012 D identified by match to protein family HMM PF03477; transcriptional regulator NrdR 620557..621012 Gardnerella vaginalis 409-05 8709523 YP_003373812.1 CDS HMPREF0424_0576 NC_013721.1 621074 623350 R DNA or RNA helicase, Superfamily I family protein complement(621074..623350) Gardnerella vaginalis 409-05 8708753 YP_003373813.1 CDS HMPREF0424_0577 NC_013721.1 623692 624648 D identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase 623692..624648 Gardnerella vaginalis 409-05 8709382 YP_003373814.1 CDS HMPREF0424_0578 NC_013721.1 624779 626182 D identified by match to protein family HMM PF07690; transporter, major facilitator family protein 624779..626182 Gardnerella vaginalis 409-05 8709736 YP_003373815.1 CDS HMPREF0424_0579 NC_013721.1 626604 627530 R hypothetical protein complement(626604..627530) Gardnerella vaginalis 409-05 8709065 YP_003373816.1 CDS HMPREF0424_0580 NC_013721.1 627782 629227 D identified by match to protein family HMM PF07690; transporter, major facilitator family protein 627782..629227 Gardnerella vaginalis 409-05 8708826 YP_003373817.1 CDS hrpA NC_013721.1 629382 633467 R identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967; ATP-dependent helicase HrpA complement(629382..633467) Gardnerella vaginalis 409-05 8709672 YP_003373818.1 CDS HMPREF0424_0582 NC_013721.1 633530 634228 R identified by match to protein family HMM PF05175; methyltransferase small domain protein complement(633530..634228) Gardnerella vaginalis 409-05 8709314 YP_003373819.1 CDS hflX NC_013721.1 634409 635947 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR03156; GTP-binding protein HflX 634409..635947 Gardnerella vaginalis 409-05 8709138 YP_003373820.1 CDS HMPREF0424_0584 NC_013721.1 636091 637053 D identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase 636091..637053 Gardnerella vaginalis 409-05 8710016 YP_003373821.1 CDS HMPREF0424_0585 NC_013721.1 637179 638663 D identified by match to protein family HMM PF02518; match to protein family HMM PF07568; match to protein family HMM PF08448; sensor histidine kinase/response regulator 637179..638663 Gardnerella vaginalis 409-05 8709098 YP_003373822.1 CDS whiB NC_013721.1 638850 639122 D identified by match to protein family HMM PF02467; transcription factor WhiB 638850..639122 Gardnerella vaginalis 409-05 8709849 YP_003373823.1 CDS HMPREF0424_0587 NC_013721.1 639129 640952 R identified by match to protein family HMM PF01580; FtsK/SpoIIIE family protein complement(639129..640952) Gardnerella vaginalis 409-05 8708805 YP_003373824.1 CDS HMPREF0424_0588 NC_013721.1 641188 642486 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; putative transcriptional regulator complement(641188..642486) Gardnerella vaginalis 409-05 8709657 YP_003373825.1 CDS HMPREF0424_0589 NC_013721.1 642591 644087 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; putative transcriptional regulator complement(642591..644087) Gardnerella vaginalis 409-05 8708767 YP_003373826.1 CDS HMPREF0424_0590 NC_013721.1 644347 647748 D putative ATP synthase F0, A subunit 644347..647748 Gardnerella vaginalis 409-05 8709643 YP_003373827.1 CDS HMPREF0424_0591 NC_013721.1 647735 649321 D identified by glimmer; putative; hypothetical protein 647735..649321 Gardnerella vaginalis 409-05 8709926 YP_003373828.1 CDS HMPREF0424_0592 NC_013721.1 649398 649826 R hypothetical protein complement(649398..649826) Gardnerella vaginalis 409-05 8709504 YP_003373829.1 CDS HMPREF0424_0593 NC_013721.1 649946 650767 D identified by match to protein family HMM PF03332; match to protein family HMM PF08282; match to protein family HMM TIGR01484; eukaryotic phosphomannomutase 649946..650767 Gardnerella vaginalis 409-05 8709104 YP_003373830.1 CDS HMPREF0424_0595 NC_013721.1 650859 651752 D hypothetical protein 650859..651752 Gardnerella vaginalis 409-05 8709957 YP_003373831.1 CDS HMPREF0424_0594 NC_013721.1 651749 652924 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase/response regulator complement(651749..652924) Gardnerella vaginalis 409-05 8709842 YP_003373832.1 CDS HMPREF0424_0596 NC_013721.1 653012 653764 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain protein complement(653012..653764) Gardnerella vaginalis 409-05 8708954 YP_003373833.1 CDS glgB NC_013721.1 653781 656066 R identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922; match to protein family HMM TIGR01515; 1,4-alpha-glucan branching enzyme complement(653781..656066) Gardnerella vaginalis 409-05 8709930 YP_003373834.1 CDS HMPREF0424_0598 NC_013721.1 656189 656785 D identified by match to protein family HMM PF02559; CarD-like protein 656189..656785 Gardnerella vaginalis 409-05 8708894 YP_003373835.1 CDS HMPREF0424_0599 NC_013721.1 656999 658051 R identified by match to protein family HMM PF01297; periplasmic solute binding family protein complement(656999..658051) Gardnerella vaginalis 409-05 8708752 YP_003373836.1 CDS HMPREF0424_0600 NC_013721.1 658173 659057 D identified by match to protein family HMM PF00763; match to protein family HMM PF02882; tetrahydrofolate dehydrogenase/cyclohydrolase 658173..659057 Gardnerella vaginalis 409-05 8709632 YP_003373837.1 CDS rpsA NC_013721.1 659204 660706 D identified by match to protein family HMM PF00575; 30S ribosomal protein S1 659204..660706 Gardnerella vaginalis 409-05 8708946 YP_003373838.1 CDS HMPREF0424_0602 NC_013721.1 660957 661286 D identified by match to protein family HMM PF05154; TM2 domain protein 660957..661286 Gardnerella vaginalis 409-05 8709218 YP_003373839.1 CDS HMPREF0424_0603 NC_013721.1 661357 661476 D identified by glimmer; putative; hypothetical protein 661357..661476 Gardnerella vaginalis 409-05 8709113 YP_003373840.1 CDS HMPREF0424_0604 NC_013721.1 661697 662269 D identified by match to protein family HMM PF05154; TM2 domain protein 661697..662269 Gardnerella vaginalis 409-05 8709971 YP_003373841.1 CDS coaE NC_013721.1 662339 663043 D identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase 662339..663043 Gardnerella vaginalis 409-05 8709271 YP_003373842.1 CDS uvrB NC_013721.1 663064 665178 D identified by match to protein family HMM PF00271; match to protein family HMM PF02151; match to protein family HMM PF04851; match to protein family HMM TIGR00631; excinuclease ABC subunit B 663064..665178 Gardnerella vaginalis 409-05 8709472 YP_003373843.1 CDS pyk NC_013721.1 665414 666853 D identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 665414..666853 Gardnerella vaginalis 409-05 8709397 YP_003373844.1 CDS HMPREF0424_0609 NC_013721.1 667296 668951 D identified by match to protein family HMM PF00128; match to protein family HMM PF02806; alpha amylase, catalytic domain protein 667296..668951 Gardnerella vaginalis 409-05 8710055 YP_003373845.1 CDS pulA_1 NC_013721.1 669211 674877 D identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922; match to protein family HMM PF03423; match to protein family HMM TIGR02104; pullulanase, type I 669211..674877 Gardnerella vaginalis 409-05 8709109 YP_003373846.1 CDS HMPREF0424_0611 NC_013721.1 675547 676173 D hypothetical protein 675547..676173 Gardnerella vaginalis 409-05 8709601 YP_003373847.1 CDS HMPREF0424_0612 NC_013721.1 676317 676898 D hypothetical protein 676317..676898 Gardnerella vaginalis 409-05 8709071 YP_003373848.1 CDS HMPREF0424_0613 NC_013721.1 677118 679001 D identified by match to protein family HMM PF00005; match to protein family HMM PF02463; cobalt ABC transporter, ATP-binding protein 677118..679001 Gardnerella vaginalis 409-05 8709437 YP_003373849.1 CDS HMPREF0424_0614 NC_013721.1 679061 679834 D identified by match to protein family HMM PF02361; cobalt transport protein 679061..679834 Gardnerella vaginalis 409-05 8708909 YP_003373850.1 CDS menA NC_013721.1 679889 680974 D identified by match to protein family HMM PF01040; match to protein family HMM TIGR00751; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 679889..680974 Gardnerella vaginalis 409-05 8709236 YP_003373851.1 CDS HMPREF0424_0616 NC_013721.1 681246 681995 D identified by match to protein family HMM PF00072; match to protein family HMM PF03861; response regulator receiver domain protein 681246..681995 Gardnerella vaginalis 409-05 8710004 YP_003373852.1 CDS polA NC_013721.1 682074 685151 D identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA-directed DNA polymerase 682074..685151 Gardnerella vaginalis 409-05 8709537 YP_003373853.1 CDS HMPREF0424_0618 NC_013721.1 685173 686057 D identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; dinuclear metal center protein, YbgI family 685173..686057 Gardnerella vaginalis 409-05 8708931 YP_003373854.1 CDS glgX NC_013721.1 686139 688268 D identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching enzyme GlgX 686139..688268 Gardnerella vaginalis 409-05 8709149 YP_003373855.1 CDS HMPREF0424_0620 NC_013721.1 688375 689478 R hypothetical protein complement(688375..689478) Gardnerella vaginalis 409-05 8709847 YP_003373856.1 CDS aroA NC_013721.1 689796 691181 D identified by match to protein family HMM PF00275; match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 689796..691181 Gardnerella vaginalis 409-05 8710077 YP_003373857.1 CDS ackA NC_013721.1 691262 692491 R identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016; acetate kinase complement(691262..692491) Gardnerella vaginalis 409-05 8709972 YP_003373858.1 CDS pta NC_013721.1 692643 694349 R identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651; phosphate acetyltransferase complement(692643..694349) Gardnerella vaginalis 409-05 8709276 YP_003373859.1 CDS xfp NC_013721.1 694637 697132 R identified by match to protein family HMM PF03894; match to protein family HMM PF09363; match to protein family HMM PF09364; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase complement(694637..697132) Gardnerella vaginalis 409-05 8710001 YP_003373860.1 CDS guaA NC_013721.1 697516 699078 D identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888; GMP synthase (glutamine-hydrolyzing), C-terminal domain protein 697516..699078 Gardnerella vaginalis 409-05 8708867 YP_003373861.1 CDS HMPREF0424_0627 NC_013721.1 699665 699874 D hypothetical protein 699665..699874 Gardnerella vaginalis 409-05 8708930 YP_003373862.1 CDS HMPREF0424_0628 NC_013721.1 700078 700563 D identified by match to protein family HMM PF03965; match to protein family HMM TIGR02698; copper transport repressor, CopY/TcrY family 700078..700563 Gardnerella vaginalis 409-05 8709687 YP_003373863.1 CDS HMPREF0424_0629 NC_013721.1 700583 702679 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-exporting ATPase 700583..702679 Gardnerella vaginalis 409-05 8709115 YP_003373864.1 CDS HMPREF0424_0633 NC_013721.1 704689 706077 D identified by match to protein family HMM PF04215; putative PTS system, sugar-specific IIC component 704689..706077 Gardnerella vaginalis 409-05 8709500 YP_003373865.1 CDS ubiC NC_013721.1 706292 707023 D identified by match to protein family HMM PF00392; match to protein family HMM PF07702; UbiC transcription regulator-associated 706292..707023 Gardnerella vaginalis 409-05 8709918 YP_003373866.1 CDS HMPREF0424_0636 NC_013721.1 707320 709266 R identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; putative succinate dehydrogenase flavoprotein subunit complement(707320..709266) Gardnerella vaginalis 409-05 8710073 YP_003373867.1 CDS dprA NC_013721.1 709307 710851 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA complement(709307..710851) Gardnerella vaginalis 409-05 8708799 YP_003373868.1 CDS HMPREF0424_0638 NC_013721.1 710848 712491 R identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg chelatase-like protein complement(710848..712491) Gardnerella vaginalis 409-05 8709553 YP_003373869.1 CDS HMPREF0424_0639 NC_013721.1 712491 713039 R identified by match to protein family HMM PF02021; hypothetical protein complement(712491..713039) Gardnerella vaginalis 409-05 8709017 YP_003373870.1 CDS HMPREF0424_0640 NC_013721.1 713291 714682 D identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326; O-acetylhomoserine aminocarboxypropyltransferase 713291..714682 Gardnerella vaginalis 409-05 8709966 YP_003373871.1 CDS HMPREF0424_0641 NC_013721.1 714952 715791 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 714952..715791 Gardnerella vaginalis 409-05 8709244 YP_003373872.1 CDS HMPREF0424_0642 NC_013721.1 715809 718502 D identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein 715809..718502 Gardnerella vaginalis 409-05 8709894 YP_003373873.1 CDS HMPREF0424_0643 NC_013721.1 718888 720855 D identified by glimmer; putative; hypothetical protein 718888..720855 Gardnerella vaginalis 409-05 8709349 YP_003373874.1 CDS HMPREF0424_0644 NC_013721.1 720938 721723 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM PF08281; response regulator receiver domain protein complement(720938..721723) Gardnerella vaginalis 409-05 8708857 YP_003373875.1 CDS HMPREF0424_0645 NC_013721.1 721736 724285 R identified by match to protein family HMM PF07730; histidine kinase complement(721736..724285) Gardnerella vaginalis 409-05 8709682 YP_003373876.1 CDS HMPREF0424_0646 NC_013721.1 724403 725785 D identified by match to protein family HMM PF00561; hydrolase, alpha/beta domain protein 724403..725785 Gardnerella vaginalis 409-05 8709884 YP_003373877.1 CDS proC NC_013721.1 725912 726715 D identified by match to protein family HMM PF03807; match to protein family HMM TIGR00112; pyrroline-5-carboxylate reductase 725912..726715 Gardnerella vaginalis 409-05 8709171 YP_003373878.1 CDS ychF NC_013721.1 726770 727858 D identified by match to protein family HMM PF01926; match to protein family HMM PF06071; match to protein family HMM TIGR00092; GTP-binding protein YchF 726770..727858 Gardnerella vaginalis 409-05 8709165 YP_003373879.1 CDS HMPREF0424_0649 NC_013721.1 728005 728790 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG 728005..728790 Gardnerella vaginalis 409-05 8709721 YP_003373880.1 CDS HMPREF0424_0650 NC_013721.1 728893 729954 R identified by match to protein family HMM PF03601; hypothetical protein complement(728893..729954) Gardnerella vaginalis 409-05 8709660 YP_003373881.1 CDS HMPREF0424_0651 NC_013721.1 730176 730541 D identified by match to protein family HMM PF04343; hypothetical protein 730176..730541 Gardnerella vaginalis 409-05 8709007 YP_003373882.1 CDS HMPREF0424_0652 NC_013721.1 730880 732169 D identified by match to protein family HMM PF00860; match to protein family HMM PF03594; match to protein family HMM TIGR00801; uracil-xanthine permease 730880..732169 Gardnerella vaginalis 409-05 8708812 YP_003373883.1 CDS HMPREF0424_0653 NC_013721.1 732491 735541 D identified by match to protein family HMM PF03699; hypothetical protein 732491..735541 Gardnerella vaginalis 409-05 8709977 YP_003373884.1 CDS HMPREF0424_0654 NC_013721.1 735642 736433 R identified by match to protein family HMM PF00528; ABC transporter permease complement(735642..736433) Gardnerella vaginalis 409-05 8709850 YP_003373885.1 CDS HMPREF0424_0655 NC_013721.1 736742 737794 D identified by match to protein family HMM PF09084; NMT1/THI5-like protein 736742..737794 Gardnerella vaginalis 409-05 8708965 YP_003373886.1 CDS pth NC_013721.1 737934 738533 D identified by match to protein family HMM PF01195; match to protein family HMM TIGR00447; aminoacyl-tRNA hydrolase 737934..738533 Gardnerella vaginalis 409-05 8709668 YP_003373887.1 CDS mfd NC_013721.1 738523 742131 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor 738523..742131 Gardnerella vaginalis 409-05 8708796 YP_003373888.1 CDS HMPREF0424_0658 NC_013721.1 742169 742906 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(742169..742906) Gardnerella vaginalis 409-05 8709535 YP_003373889.1 CDS HMPREF0424_0659 NC_013721.1 743057 744055 R putative lipoprotein complement(743057..744055) Gardnerella vaginalis 409-05 8709554 YP_003373890.1 CDS HMPREF0424_0660 NC_013721.1 744210 745025 R identified by match to protein family HMM PF00528; ABC transporter permease complement(744210..745025) Gardnerella vaginalis 409-05 8709169 YP_003373891.1 CDS eno NC_013721.1 745350 746645 D identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; phosphopyruvate hydratase 745350..746645 Gardnerella vaginalis 409-05 8710021 YP_003373892.1 CDS HMPREF0424_0663 NC_013721.1 746856 747770 D identified by match to protein family HMM PF00056; match to protein family HMM PF02866; lactate/malate dehydrogenase, NAD binding domain protein 746856..747770 Gardnerella vaginalis 409-05 8709315 YP_003373893.1 CDS folK NC_013721.1 748032 748532 D identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 748032..748532 Gardnerella vaginalis 409-05 8709093 YP_003373894.1 CDS folP NC_013721.1 748588 749727 D identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 748588..749727 Gardnerella vaginalis 409-05 8709780 YP_003373895.1 CDS HMPREF0424_0666 NC_013721.1 749919 750392 D identified by match to protein family HMM PF04977; septum formation initiator 749919..750392 Gardnerella vaginalis 409-05 8709701 YP_003373896.1 CDS HMPREF0424_0667 NC_013721.1 750474 752180 D identified by match to protein family HMM PF02541; match to protein family HMM PF04417; Ppx/GppA phosphatase family protein 750474..752180 Gardnerella vaginalis 409-05 8709194 YP_003373897.1 CDS HMPREF0424_0669 NC_013721.1 752541 753572 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation diffusion facilitator family transporter 752541..753572 Gardnerella vaginalis 409-05 8710035 YP_003373898.1 CDS HMPREF0424_0670 NC_013721.1 753685 754593 D identified by match to protein family HMM PF00588; match to protein family HMM PF08032; RNA methyltransferase, TrmH family 753685..754593 Gardnerella vaginalis 409-05 8709712 YP_003373899.1 CDS pheS NC_013721.1 754577 755731 D identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; phenylalanyl-tRNA synthetase, alpha subunit 754577..755731 Gardnerella vaginalis 409-05 8708850 YP_003373900.1 CDS pheT NC_013721.1 755737 758358 D identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase, beta subunit 755737..758358 Gardnerella vaginalis 409-05 8708914 YP_003373901.1 CDS HMPREF0424_0673 NC_013721.1 758552 759154 D identified by match to protein family HMM PF01316; match to protein family HMM PF02863; arginine repressor, C-terminal domain protein 758552..759154 Gardnerella vaginalis 409-05 8709430 YP_003373902.1 CDS argG NC_013721.1 759431 760645 D identified by match to protein family HMM PF00764; match to protein family HMM PF06508; match to protein family HMM TIGR00032; argininosuccinate synthase 759431..760645 Gardnerella vaginalis 409-05 8709357 YP_003373903.1 CDS argH NC_013721.1 760682 762199 D identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838; argininosuccinate lyase 760682..762199 Gardnerella vaginalis 409-05 8709797 YP_003373904.1 CDS tyrS NC_013721.1 762366 763685 D identified by match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234; tyrosine--tRNA ligase 762366..763685 Gardnerella vaginalis 409-05 8709003 YP_003373905.1 CDS HMPREF0424_0677 NC_013721.1 763838 765469 D hypothetical protein 763838..765469 Gardnerella vaginalis 409-05 8709622 YP_003373906.1 CDS HMPREF0424_0678 NC_013721.1 765614 766714 D identified by match to protein family HMM TIGR01460; HAD hydrolase, family IIA 765614..766714 Gardnerella vaginalis 409-05 8709152 YP_003373907.1 CDS rrmJ NC_013721.1 766711 767514 D identified by match to protein family HMM PF01479; match to protein family HMM PF01728; ribosomal RNA large subunit methyltransferase J 766711..767514 Gardnerella vaginalis 409-05 8709856 YP_003373908.1 CDS HMPREF0424_0680 NC_013721.1 767605 768528 D identified by match to protein family HMM PF01513; NAD(+)/NADH kinase 767605..768528 Gardnerella vaginalis 409-05 8709287 YP_003373909.1 CDS recN NC_013721.1 768583 770367 D identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN 768583..770367 Gardnerella vaginalis 409-05 8710014 YP_003373910.1 CDS HMPREF0424_0682 NC_013721.1 770351 771031 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD hydrolase, family IA, variant 3 770351..771031 Gardnerella vaginalis 409-05 8709249 YP_003373911.1 CDS raiA NC_013721.1 771635 772306 D identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 771635..772306 Gardnerella vaginalis 409-05 8710033 YP_003373912.1 CDS secA NC_013721.1 772494 775289 D identified by match to protein family HMM PF01043; match to protein family HMM PF02810; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963; preprotein translocase, SecA subunit 772494..775289 Gardnerella vaginalis 409-05 8710022 YP_003373913.1 CDS HMPREF0424_0686 NC_013721.1 775373 776041 R hypothetical protein complement(775373..776041) Gardnerella vaginalis 409-05 8709303 YP_003373914.1 CDS HMPREF0424_0687 NC_013721.1 776019 776138 D identified by glimmer; putative; hypothetical protein 776019..776138 Gardnerella vaginalis 409-05 8708824 YP_003373915.1 CDS HMPREF0424_0688 NC_013721.1 776117 776824 D identified by match to protein family HMM PF01553; acyltransferase 776117..776824 Gardnerella vaginalis 409-05 8709474 YP_003373916.1 CDS HMPREF0424_0689 NC_013721.1 776942 779332 R identified by match to protein family HMM PF00069; match to protein family HMM PF03793; kinase domain protein complement(776942..779332) Gardnerella vaginalis 409-05 8709935 YP_003373917.1 CDS HMPREF0424_0690 NC_013721.1 779430 780536 R identified by match to protein family HMM PF00348; polyprenyl synthetase complement(779430..780536) Gardnerella vaginalis 409-05 8709331 YP_003373918.1 CDS HMPREF0424_0691 NC_013721.1 780731 781597 D identified by glimmer; putative; hypothetical protein 780731..781597 Gardnerella vaginalis 409-05 8709571 YP_003373919.1 CDS rpoD NC_013721.1 781727 783196 D identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937; RNA polymerase sigma factor RpoD 781727..783196 Gardnerella vaginalis 409-05 8709185 YP_003373920.1 CDS HMPREF0424_0693 NC_013721.1 783303 785681 D identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF02518; DNA gyrase, B subunit, C-terminal domain protein 783303..785681 Gardnerella vaginalis 409-05 8709518 YP_003373921.1 CDS HMPREF0424_0694 NC_013721.1 785798 786979 D identified by match to protein family HMM PF07690; transporter, major facilitator family protein 785798..786979 Gardnerella vaginalis 409-05 8709037 YP_003373922.1 CDS HMPREF0424_0695 NC_013721.1 787131 787373 D hypothetical protein 787131..787373 Gardnerella vaginalis 409-05 8709386 YP_003373923.1 CDS HMPREF0424_0696 NC_013721.1 787370 787864 D hypothetical protein 787370..787864 Gardnerella vaginalis 409-05 8708843 YP_003373924.1 CDS HMPREF0424_0697 NC_013721.1 787871 788098 D hypothetical protein 787871..788098 Gardnerella vaginalis 409-05 8709763 YP_003373925.1 CDS HMPREF0424_0698 NC_013721.1 788219 790423 D identified by match to protein family HMM PF07523; match to protein family HMM PF09479; match to protein family HMM TIGR02543; phage prohead protease, HK97 family 788219..790423 Gardnerella vaginalis 409-05 8709199 YP_003373926.1 CDS HMPREF0424_0699 NC_013721.1 790460 793123 R identified by match to protein family HMM PF00521; match to protein family HMM PF03989; DNA gyrase/topoisomerase IV, A subunit complement(790460..793123) Gardnerella vaginalis 409-05 8709652 YP_003373927.1 CDS HMPREF0424_0700 NC_013721.1 793285 794544 D identified by match to protein family HMM PF01663; type I phosphodiesterase/nucleotide pyrophosphatase 793285..794544 Gardnerella vaginalis 409-05 8708769 YP_003373928.1 CDS HMPREF0424_0701 NC_013721.1 794678 795886 R hypothetical protein complement(794678..795886) Gardnerella vaginalis 409-05 8708937 YP_003373929.1 CDS HMPREF0424_0702 NC_013721.1 796045 796338 D hypothetical protein 796045..796338 Gardnerella vaginalis 409-05 8709857 YP_003373930.1 CDS dut NC_013721.1 796339 796818 D identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; dUTP diphosphatase 796339..796818 Gardnerella vaginalis 409-05 8709140 YP_003373931.1 CDS relA NC_013721.1 796941 799292 D identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP diphosphokinase 796941..799292 Gardnerella vaginalis 409-05 8709982 YP_003373932.1 CDS hup NC_013721.1 799382 799663 R identified by match to protein family HMM PF00216; DNA-binding protein HU complement(799382..799663) Gardnerella vaginalis 409-05 8709266 YP_003373933.1 CDS HMPREF0424_0706 NC_013721.1 799869 802304 R identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374; hypothetical protein complement(799869..802304) Gardnerella vaginalis 409-05 8708842 YP_003373934.1 CDS purB NC_013721.1 802320 803762 R identified by match to protein family HMM PF00206; match to protein family HMM PF08328; match to protein family HMM TIGR00928; adenylosuccinate lyase complement(802320..803762) Gardnerella vaginalis 409-05 8709662 YP_003373935.1 CDS HMPREF0424_0708 NC_013721.1 803825 805432 R hypothetical protein complement(803825..805432) Gardnerella vaginalis 409-05 8709713 YP_003373936.1 CDS HMPREF0424_0709 NC_013721.1 805733 806323 R hypothetical protein complement(805733..806323) Gardnerella vaginalis 409-05 8709629 YP_003373937.1 CDS HMPREF0424_0710 NC_013721.1 806320 807435 R identified by match to protein family HMM PF00092; overlaps another CDS with the same product name; von Willebrand factor type A domain protein complement(806320..807435) Gardnerella vaginalis 409-05 8709455 YP_003373938.1 CDS HMPREF0424_0711 NC_013721.1 807432 808568 R identified by match to protein family HMM PF00092; overlaps another CDS with the same product name; von Willebrand factor type A domain protein complement(807432..808568) Gardnerella vaginalis 409-05 8708766 YP_003373939.1 CDS HMPREF0424_0712 NC_013721.1 808568 809095 R hypothetical protein complement(808568..809095) Gardnerella vaginalis 409-05 8709888 YP_003373940.1 CDS HMPREF0424_0713 NC_013721.1 809097 810038 R identified by match to protein family HMM PF01882; hypothetical protein complement(809097..810038) Gardnerella vaginalis 409-05 8709162 YP_003373941.1 CDS HMPREF0424_0714 NC_013721.1 810035 811168 R identified by match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase family associated with various cellular activities (AAA) complement(810035..811168) Gardnerella vaginalis 409-05 8709751 YP_003373942.1 CDS ung NC_013721.1 811250 811966 R identified by match to protein family HMM PF03167; match to protein family HMM TIGR00628; uracil-DNA glycosylase complement(811250..811966) Gardnerella vaginalis 409-05 8709549 YP_003373943.1 CDS HMPREF0424_0716 NC_013721.1 812094 812762 D hypothetical protein 812094..812762 Gardnerella vaginalis 409-05 8709137 YP_003373944.1 CDS groL NC_013721.1 812963 814588 D identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348; chaperonin GroL 812963..814588 Gardnerella vaginalis 409-05 8709844 YP_003373945.1 CDS HMPREF0424_0718 NC_013721.1 814695 814988 R identified by match to protein family HMM PF06013; hypothetical protein complement(814695..814988) Gardnerella vaginalis 409-05 8708862 YP_003373946.1 CDS HMPREF0424_0719 NC_013721.1 815040 815945 D hypothetical protein 815040..815945 Gardnerella vaginalis 409-05 8710010 YP_003373947.1 CDS HMPREF0424_0720 NC_013721.1 816024 816764 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain protein 816024..816764 Gardnerella vaginalis 409-05 8708950 YP_003373948.1 CDS HMPREF0424_0721 NC_013721.1 816767 818713 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase/response regulator 816767..818713 Gardnerella vaginalis 409-05 8709489 YP_003373949.1 CDS HMPREF0424_0722 NC_013721.1 818905 819294 D identified by match to protein family HMM PF00313; cold-shock DNA-binding domain protein 818905..819294 Gardnerella vaginalis 409-05 8709727 YP_003373950.1 CDS HMPREF0424_0723 NC_013721.1 819294 820700 D hypothetical protein 819294..820700 Gardnerella vaginalis 409-05 8709589 YP_003373951.1 CDS clpC NC_013721.1 820852 823440 D identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; negative regulator of genetic competence ClpC/MecB 820852..823440 Gardnerella vaginalis 409-05 8709881 YP_003373952.1 CDS HMPREF0424_0725 NC_013721.1 823532 823861 R identified by glimmer; putative; hypothetical protein complement(823532..823861) Gardnerella vaginalis 409-05 8709323 YP_003373953.1 CDS HMPREF0424_0726 NC_013721.1 823888 824217 R identified by glimmer; putative; hypothetical protein complement(823888..824217) Gardnerella vaginalis 409-05 8709088 YP_003373954.1 CDS HMPREF0424_0727 NC_013721.1 824525 824665 R hypothetical protein complement(824525..824665) Gardnerella vaginalis 409-05 8709602 YP_003373955.1 CDS HMPREF0424_0728 NC_013721.1 825847 826047 D identified by glimmer; putative; hypothetical protein 825847..826047 Gardnerella vaginalis 409-05 8709044 YP_003373956.1 CDS HMPREF0424_0729 NC_013721.1 826074 826667 D identified by glimmer; putative; hypothetical protein 826074..826667 Gardnerella vaginalis 409-05 8709451 YP_003373957.1 CDS HMPREF0424_0730 NC_013721.1 827429 827617 D identified by glimmer; putative; hypothetical protein 827429..827617 Gardnerella vaginalis 409-05 8708858 YP_003373958.1 CDS HMPREF0424_0731 NC_013721.1 827746 829269 D identified by glimmer; putative; hypothetical protein 827746..829269 Gardnerella vaginalis 409-05 8709940 YP_003373959.1 CDS HMPREF0424_0732 NC_013721.1 830038 830529 D identified by match to protein family HMM PF00293; hydrolase, NUDIX family 830038..830529 Gardnerella vaginalis 409-05 8709085 YP_003373960.1 CDS HMPREF0424_0733 NC_013721.1 831233 831667 D cytidine/deoxycytidylate deaminase family protein 831233..831667 Gardnerella vaginalis 409-05 8709638 YP_003373961.1 CDS HMPREF0424_0734 NC_013721.1 831739 832707 D hypothetical protein 831739..832707 Gardnerella vaginalis 409-05 8709822 YP_003373962.1 CDS HMPREF0424_0735 NC_013721.1 833304 833864 D hypothetical protein 833304..833864 Gardnerella vaginalis 409-05 8709198 YP_003373963.1 CDS HMPREF0424_0736 NC_013721.1 833874 834800 D hypothetical protein 833874..834800 Gardnerella vaginalis 409-05 8709978 YP_003373964.1 CDS HMPREF0424_0737 NC_013721.1 835265 835459 D hypothetical protein 835265..835459 Gardnerella vaginalis 409-05 8709284 YP_003373965.1 CDS HMPREF0424_0738 NC_013721.1 835658 837058 D identified by glimmer; putative; hypothetical protein 835658..837058 Gardnerella vaginalis 409-05 8709496 YP_003373966.1 CDS HMPREF0424_0739 NC_013721.1 837358 838071 D identified by glimmer; putative; hypothetical protein 837358..838071 Gardnerella vaginalis 409-05 8708822 YP_003373967.1 CDS HMPREF0424_0740 NC_013721.1 838170 838469 R identified by glimmer; putative; hypothetical protein complement(838170..838469) Gardnerella vaginalis 409-05 8709575 YP_003373968.1 CDS HMPREF0424_0741 NC_013721.1 838658 839518 D identified by glimmer; putative; hypothetical protein 838658..839518 Gardnerella vaginalis 409-05 8709812 YP_003373969.1 CDS HMPREF0424_0742 NC_013721.1 839976 841277 D identified by glimmer; putative; hypothetical protein 839976..841277 Gardnerella vaginalis 409-05 8709147 YP_003373970.1 CDS HMPREF0424_0743 NC_013721.1 841441 841557 D identified by glimmer; putative; hypothetical protein 841441..841557 Gardnerella vaginalis 409-05 8710017 YP_003373971.1 CDS HMPREF0424_0744 NC_013721.1 841627 841794 D identified by glimmer; putative; hypothetical protein 841627..841794 Gardnerella vaginalis 409-05 8709336 YP_003373972.1 CDS HMPREF0424_0745 NC_013721.1 842056 843393 D hypothetical protein 842056..843393 Gardnerella vaginalis 409-05 8709750 YP_003373973.1 CDS HMPREF0424_0746 NC_013721.1 843659 843991 R identified by match to protein family HMM PF05016; toxin-antitoxin system, toxin component, RelE family complement(843659..843991) Gardnerella vaginalis 409-05 8709075 YP_003373974.1 CDS HMPREF0424_0747 NC_013721.1 843988 844302 R identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein complement(843988..844302) Gardnerella vaginalis 409-05 8709555 YP_003373975.1 CDS HMPREF0424_0748 NC_013721.1 844709 845467 D hypothetical protein 844709..845467 Gardnerella vaginalis 409-05 8708880 YP_003373976.1 CDS HMPREF0424_0749 NC_013721.1 846353 847360 D type II DNA modification methyltransferase family protein 846353..847360 Gardnerella vaginalis 409-05 8709421 YP_003373977.1 CDS HMPREF0424_0750 NC_013721.1 847338 851432 D identified by match to protein family HMM PF04851; match to protein family HMM PF07669; Eco57I restriction endonuclease 847338..851432 Gardnerella vaginalis 409-05 8709765 YP_003373978.1 CDS HMPREF0424_0751 NC_013721.1 851446 852000 D hypothetical protein 851446..852000 Gardnerella vaginalis 409-05 8709371 YP_003373979.1 CDS HMPREF0424_0752 NC_013721.1 852019 853305 D hypothetical protein 852019..853305 Gardnerella vaginalis 409-05 8709557 YP_003373980.1 CDS HMPREF0424_0753 NC_013721.1 853482 853850 D hypothetical protein 853482..853850 Gardnerella vaginalis 409-05 8709181 YP_003373981.1 CDS HMPREF0424_0757 NC_013721.1 857265 858341 D hypothetical protein 857265..858341 Gardnerella vaginalis 409-05 8709716 YP_003373982.1 CDS HMPREF0424_0758 NC_013721.1 858506 859534 D identified by glimmer; putative; hypothetical protein 858506..859534 Gardnerella vaginalis 409-05 8708917 YP_003373983.1 CDS cas3 NC_013721.1 860091 862937 D identified by match to protein family HMM TIGR01587; match to protein family HMM TIGR01596; CRISPR-associated helicase Cas3 860091..862937 Gardnerella vaginalis 409-05 8709870 YP_003373984.1 CDS casA NC_013721.1 862934 864604 D identified by match to protein family HMM PF09481; match to protein family HMM TIGR02547; CRISPR system CASCADE complex protein CasA 862934..864604 Gardnerella vaginalis 409-05 8709410 YP_003373985.1 CDS casB NC_013721.1 864626 865240 D identified by match to protein family HMM PF09485; match to protein family HMM TIGR02548; CRISPR system CASCADE complex protein CasB 864626..865240 Gardnerella vaginalis 409-05 8709029 YP_003373986.1 CDS casC NC_013721.1 865328 866416 D identified by match to protein family HMM PF09344; match to protein family HMM TIGR01869; CRISPR system CASCADE complex protein CasC 865328..866416 Gardnerella vaginalis 409-05 8709545 YP_003373987.1 CDS casD NC_013721.1 866475 867350 D identified by match to protein family HMM PF09708; match to protein family HMM TIGR01868; match to protein family HMM TIGR02593; CRISPR system CASCADE complex protein CasD 866475..867350 Gardnerella vaginalis 409-05 8709782 YP_003373988.1 CDS casE NC_013721.1 867351 867998 D identified by match to protein family HMM PF08798; match to protein family HMM TIGR01907; CRISPR system CASCADE complex protein CasE 867351..867998 Gardnerella vaginalis 409-05 8709805 YP_003373989.1 CDS cas2 NC_013721.1 868034 868975 D identified by match to protein family HMM TIGR00287; match to protein family HMM TIGR03638; CRISPR-associated endonuclease Cas1, ECOLI subtype 868034..868975 Gardnerella vaginalis 409-05 8709646 YP_003373990.1 CDS cas1 NC_013721.1 868977 870056 D identified by match to protein family HMM PF00929; match to protein family HMM PF09707; match to protein family HMM TIGR01873; CRISPR-associated endoribonuclease Cas2 868977..870056 Gardnerella vaginalis 409-05 8709011 YP_003373991.1 CDS HMPREF0424_0767 NC_013721.1 870795 870938 R identified by glimmer; putative; hypothetical protein complement(870795..870938) Gardnerella vaginalis 409-05 8708849 YP_003373992.1 CDS HMPREF0424_0773 NC_013721.1 871921 873162 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01879; allantoate amidohydrolase 871921..873162 Gardnerella vaginalis 409-05 8710034 YP_003373993.1 CDS ncs NC_013721.1 873472 874956 D identified by match to protein family HMM PF02133; NCS1 nucleoside transporter family protein 873472..874956 Gardnerella vaginalis 409-05 8709319 YP_003373994.1 CDS allB NC_013721.1 874958 876334 D identified by match to protein family HMM PF01979; match to protein family HMM TIGR03178; allantoinase 874958..876334 Gardnerella vaginalis 409-05 8709921 YP_003373995.1 CDS thiS_1 NC_013721.1 876395 876592 D identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 876395..876592 Gardnerella vaginalis 409-05 8709463 YP_003373996.1 CDS thiF NC_013721.1 876593 877216 D identified by match to protein family HMM PF00899; match to protein family HMM TIGR02354; thiamine biosynthesis protein ThiF 876593..877216 Gardnerella vaginalis 409-05 8708834 YP_003373997.1 CDS thiG_1 NC_013721.1 877194 877973 D identified by match to protein family HMM PF05690; thiazole biosynthesis protein ThiG 877194..877973 Gardnerella vaginalis 409-05 8709693 YP_003373998.1 CDS HMPREF0424_0780 NC_013721.1 878385 881837 D identified by match to protein family HMM PF00515; hypothetical protein 878385..881837 Gardnerella vaginalis 409-05 8710066 YP_003373999.1 CDS ligA NC_013721.1 881971 884859 D identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; DNA ligase (NAD(+)) 881971..884859 Gardnerella vaginalis 409-05 8709562 YP_003374000.1 CDS HMPREF0424_0782 NC_013721.1 884863 885990 D identified by match to protein family HMM PF01883; CobQ/CobB/MinD/ParA nucleotide binding domain family protein 884863..885990 Gardnerella vaginalis 409-05 8709540 YP_003374001.1 CDS HMPREF0424_0783 NC_013721.1 886084 887454 R identified by match to protein family HMM PF03993; hypothetical protein complement(886084..887454) Gardnerella vaginalis 409-05 8709016 YP_003374002.1 CDS hisS NC_013721.1 887503 888951 D identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidine--tRNA ligase 887503..888951 Gardnerella vaginalis 409-05 8709561 YP_003374003.1 CDS aspS NC_013721.1 889043 890839 D identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF02938; match to protein family HMM TIGR00459; aspartate--tRNA ligase 889043..890839 Gardnerella vaginalis 409-05 8708996 YP_003374004.1 CDS HMPREF0424_0786 NC_013721.1 890986 891798 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 890986..891798 Gardnerella vaginalis 409-05 8709143 YP_003374005.1 CDS HMPREF0424_0787 NC_013721.1 891869 892702 D identified by match to protein family HMM PF00497; extracellular solute-binding protein 891869..892702 Gardnerella vaginalis 409-05 8709835 YP_003374006.1 CDS HMPREF0424_0788 NC_013721.1 892704 893381 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; ABC transporter permease 892704..893381 Gardnerella vaginalis 409-05 8709429 YP_003374007.1 CDS HMPREF0424_0789 NC_013721.1 893387 894472 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; ABC transporter permease 893387..894472 Gardnerella vaginalis 409-05 8710007 YP_003374008.1 CDS HMPREF0424_0790 NC_013721.1 894682 896121 D identified by match to protein family HMM PF01704; UTP--glucose-1-phosphate uridylyltransferase 894682..896121 Gardnerella vaginalis 409-05 8709062 YP_003374009.1 CDS HMPREF0424_0791 NC_013721.1 896414 898333 D hypothetical protein 896414..898333 Gardnerella vaginalis 409-05 8709136 YP_003374010.1 CDS HMPREF0424_0792 NC_013721.1 898336 898677 D identified by glimmer; putative; hypothetical protein 898336..898677 Gardnerella vaginalis 409-05 8709596 YP_003374011.1 CDS HMPREF0424_0793 NC_013721.1 898705 901338 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM PF08148; DEAD/DEAH box helicase 898705..901338 Gardnerella vaginalis 409-05 8709719 YP_003374012.1 CDS HMPREF0424_0794 NC_013721.1 901448 901795 D hypothetical protein 901448..901795 Gardnerella vaginalis 409-05 8709641 YP_003374013.1 CDS HMPREF0424_0795 NC_013721.1 901788 902522 D identified by match to protein family HMM PF00702; haloacid dehalogenase-like hydrolase 901788..902522 Gardnerella vaginalis 409-05 8708936 YP_003374014.1 CDS HMPREF0424_0796 NC_013721.1 902778 903161 R identified by glimmer; putative; hypothetical protein complement(902778..903161) Gardnerella vaginalis 409-05 8708908 YP_003374015.1 CDS HMPREF0424_0797 NC_013721.1 903166 903771 R hypothetical protein complement(903166..903771) Gardnerella vaginalis 409-05 8709769 YP_003374016.1 CDS HMPREF0424_0798 NC_013721.1 903749 904189 R identified by match to protein family HMM PF00498; FHA domain protein complement(903749..904189) Gardnerella vaginalis 409-05 8708774 YP_003374017.1 CDS HMPREF0424_0799 NC_013721.1 904208 905044 R identified by match to protein family HMM PF05949; hypothetical protein complement(904208..905044) Gardnerella vaginalis 409-05 8709925 YP_003374018.1 CDS HMPREF0424_0800 NC_013721.1 905048 905380 R identified by match to protein family HMM PF06947; small basic protein complement(905048..905380) Gardnerella vaginalis 409-05 8708922 YP_003374019.1 CDS HMPREF0424_0801 NC_013721.1 905383 906432 R identified by match to protein family HMM PF05949; hypothetical protein complement(905383..906432) Gardnerella vaginalis 409-05 8709655 YP_003374020.1 CDS HMPREF0424_0802 NC_013721.1 906452 907057 R identified by match to protein family HMM PF01066; putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(906452..907057) Gardnerella vaginalis 409-05 8708998 YP_003374021.1 CDS rpe NC_013721.1 907182 907847 R identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase complement(907182..907847) Gardnerella vaginalis 409-05 8709838 YP_003374022.1 CDS lgt NC_013721.1 907927 908844 R identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase complement(907927..908844) Gardnerella vaginalis 409-05 8709135 YP_003374023.1 CDS cdsA NC_013721.1 908887 909918 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(908887..909918) Gardnerella vaginalis 409-05 8709899 YP_003374024.1 CDS frr NC_013721.1 909952 910506 R identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor complement(909952..910506) Gardnerella vaginalis 409-05 8709282 YP_003374025.1 CDS pyrH NC_013721.1 910526 911275 R identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; UMP kinase complement(910526..911275) Gardnerella vaginalis 409-05 8709965 YP_003374026.1 CDS tsf NC_013721.1 911451 912302 R identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; translation elongation factor Ts complement(911451..912302) Gardnerella vaginalis 409-05 8709501 YP_003374027.1 CDS rpsB NC_013721.1 912403 913221 R identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 complement(912403..913221) Gardnerella vaginalis 409-05 8708855 YP_003374028.1 CDS HMPREF0424_0810 NC_013721.1 913177 913353 D identified by glimmer; putative; hypothetical protein 913177..913353 Gardnerella vaginalis 409-05 8709931 YP_003374029.1 CDS def_1 NC_013721.1 913531 914019 R identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase complement(913531..914019) Gardnerella vaginalis 409-05 8709992 YP_003374030.1 CDS HMPREF0424_0812 NC_013721.1 914085 916124 R identified by match to protein family HMM PF00501; AMP-binding enzyme complement(914085..916124) Gardnerella vaginalis 409-05 8708786 YP_003374031.1 CDS HMPREF0424_0813 NC_013721.1 916412 917002 R identified by glimmer; putative; hypothetical protein complement(916412..917002) Gardnerella vaginalis 409-05 8709498 YP_003374032.1 CDS HMPREF0424_0814 NC_013721.1 917369 918499 R identified by match to protein family HMM PF00478; match to protein family HMM TIGR01304; IMP dehydrogenase family protein complement(917369..918499) Gardnerella vaginalis 409-05 8708945 YP_003374033.1 CDS uvrC NC_013721.1 918567 920909 R identified by match to protein family HMM PF00633; match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM PF08459; match to protein family HMM TIGR00194; excinuclease ABC subunit C complement(918567..920909) Gardnerella vaginalis 409-05 8709052 YP_003374034.1 CDS uvrA NC_013721.1 921012 923963 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A complement(921012..923963) Gardnerella vaginalis 409-05 8709609 YP_003374035.1 CDS HMPREF0424_0817 NC_013721.1 924188 925789 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 924188..925789 Gardnerella vaginalis 409-05 8709837 YP_003374036.1 CDS HMPREF0424_0818 NC_013721.1 925836 928052 D hypothetical protein 925836..928052 Gardnerella vaginalis 409-05 8709124 YP_003374037.1 CDS HMPREF0424_0819 NC_013721.1 928072 929259 R identified by match to protein family HMM PF00155; aminotransferase, class I/II complement(928072..929259) Gardnerella vaginalis 409-05 8709299 YP_003374038.1 CDS HMPREF0424_0820 NC_013721.1 929353 930126 R identified by match to protein family HMM PF00480; ROK family protein complement(929353..930126) Gardnerella vaginalis 409-05 8709706 YP_003374039.1 CDS HMPREF0424_0821 NC_013721.1 930220 931254 R identified by match to protein family HMM PF00535; glycosyltransferase, group 2 family protein complement(930220..931254) Gardnerella vaginalis 409-05 8708817 YP_003374040.1 CDS HMPREF0424_0823 NC_013721.1 931480 932049 D hypothetical protein 931480..932049 Gardnerella vaginalis 409-05 8709967 YP_003374041.1 CDS HMPREF0424_0824 NC_013721.1 932097 934409 D identified by match to protein family HMM PF00005; match to protein family HMM PF02361; cobalt ABC transporter, ATP-binding protein 932097..934409 Gardnerella vaginalis 409-05 8709469 YP_003374042.1 CDS HMPREF0424_0825 NC_013721.1 934578 934883 D identified by match to protein family HMM PF01985; RNA-binding protein, YhbY family 934578..934883 Gardnerella vaginalis 409-05 8708773 YP_003374043.1 CDS HMPREF0424_0826 NC_013721.1 934897 936285 R identified by match to protein family HMM PF00004; recombination factor protein RarA complement(934897..936285) Gardnerella vaginalis 409-05 8709614 YP_003374044.1 CDS HMPREF0424_0827 NC_013721.1 936373 938901 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase complement(936373..938901) Gardnerella vaginalis 409-05 8709058 YP_003374045.1 CDS engA NC_013721.1 938952 941156 R identified by match to protein family HMM PF01926; match to protein family HMM PF02224; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR03594; ribosome-associated GTPase EngA complement(938952..941156) Gardnerella vaginalis 409-05 8709396 YP_003374046.1 CDS HMPREF0424_0829 NC_013721.1 941153 942007 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; pseudouridylate synthase complement(941153..942007) Gardnerella vaginalis 409-05 8708904 YP_003374047.1 CDS HMPREF0424_0830 NC_013721.1 942173 943144 D identified by match to protein family HMM PF00230; transporter, major intrinsic protein (MIP) family protein 942173..943144 Gardnerella vaginalis 409-05 8709696 YP_003374048.1 CDS HMPREF0424_0831 NC_013721.1 943153 943470 R hypothetical protein complement(943153..943470) Gardnerella vaginalis 409-05 8708974 YP_003374049.1 CDS HMPREF0424_0832 NC_013721.1 943612 945282 R identified by match to protein family HMM PF01808; match to protein family HMM PF02142; putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(943612..945282) Gardnerella vaginalis 409-05 8709725 YP_003374050.1 CDS HMPREF0424_0833 NC_013721.1 945316 946689 R hypothetical protein complement(945316..946689) Gardnerella vaginalis 409-05 8709184 YP_003374051.1 CDS HMPREF0424_0834 NC_013721.1 946779 947360 R identified by match to protein family HMM PF00156; putative adenine phosphoribosyltransferase complement(946779..947360) Gardnerella vaginalis 409-05 8708932 YP_003374052.1 CDS yajC NC_013721.1 947501 947902 R identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase, YajC subunit complement(947501..947902) Gardnerella vaginalis 409-05 8709446 YP_003374053.1 CDS ruvB NC_013721.1 947962 949023 R identified by match to protein family HMM PF00004; match to protein family HMM PF05491; match to protein family HMM PF05496; match to protein family HMM PF07728; match to protein family HMM TIGR00635; Holliday junction DNA helicase RuvB complement(947962..949023) Gardnerella vaginalis 409-05 8708836 YP_003374054.1 CDS ruvA NC_013721.1 949061 949690 R identified by match to protein family HMM PF01330; match to protein family HMM TIGR00084; Holliday junction DNA helicase RuvA complement(949061..949690) Gardnerella vaginalis 409-05 8709519 YP_003374055.1 CDS ruvC NC_013721.1 949778 950359 R identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228; crossover junction endodeoxyribonuclease RuvC complement(949778..950359) Gardnerella vaginalis 409-05 8709197 YP_003374056.1 CDS HMPREF0424_0839 NC_013721.1 950366 951124 R identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; DNA-binding regulatory protein, YebC/PmpR family complement(950366..951124) Gardnerella vaginalis 409-05 8709882 YP_003374057.1 CDS HMPREF0424_0840 NC_013721.1 951187 951843 R identified by match to protein family HMM PF01066; CDP-alcohol phosphatidyltransferase complement(951187..951843) Gardnerella vaginalis 409-05 8709573 YP_003374058.1 CDS thrS NC_013721.1 952059 954089 R identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; threonine--tRNA ligase complement(952059..954089) Gardnerella vaginalis 409-05 8709080 YP_003374059.1 CDS HMPREF0424_0842 NC_013721.1 954272 955165 R identified by match to protein family HMM PF00950; ABC transporter complement(954272..955165) Gardnerella vaginalis 409-05 8709416 YP_003374060.1 CDS HMPREF0424_0843 NC_013721.1 955166 956122 R identified by match to protein family HMM PF00950; ABC transporter complement(955166..956122) Gardnerella vaginalis 409-05 8708866 YP_003374061.1 CDS HMPREF0424_0844 NC_013721.1 956129 956872 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(956129..956872) Gardnerella vaginalis 409-05 8709272 YP_003374062.1 CDS HMPREF0424_0845 NC_013721.1 956996 958177 R identified by match to protein family HMM PF01297; periplasmic solute binding family protein complement(956996..958177) Gardnerella vaginalis 409-05 8709134 YP_003374063.1 CDS HMPREF0424_0846 NC_013721.1 958473 958613 D identified by glimmer; putative; hypothetical protein 958473..958613 Gardnerella vaginalis 409-05 8709878 YP_003374064.1 CDS HMPREF0424_0847 NC_013721.1 958650 959801 D identified by match to protein family HMM PF01256; YjeF domain protein 958650..959801 Gardnerella vaginalis 409-05 8709462 YP_003374065.1 CDS HMPREF0424_0848 NC_013721.1 959900 960550 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD hydrolase, family IA, variant 3 959900..960550 Gardnerella vaginalis 409-05 8708890 YP_003374066.1 CDS HMPREF0424_0849 NC_013721.1 960731 961663 D identified by match to protein family HMM PF00126; LysR family transcriptional regulator 960731..961663 Gardnerella vaginalis 409-05 8709603 YP_003374067.1 CDS HMPREF0424_0850 NC_013721.1 961879 962328 D XRE family transcriptional regulator 961879..962328 Gardnerella vaginalis 409-05 8709375 YP_003374068.1 CDS HMPREF0424_0851 NC_013721.1 962527 962982 R hypothetical protein complement(962527..962982) Gardnerella vaginalis 409-05 8709875 YP_003374069.1 CDS HMPREF0424_0852 NC_013721.1 963040 964350 R identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539; putative oxygen-independent coproporphyrinogen III oxidase complement(963040..964350) Gardnerella vaginalis 409-05 8710009 YP_003374070.1 CDS lepA NC_013721.1 964359 966239 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF06421; match to protein family HMM TIGR00231; match to protein family HMM TIGR01393; GTP-binding protein LepA complement(964359..966239) Gardnerella vaginalis 409-05 8709119 YP_003374071.1 CDS rpsT NC_013721.1 966502 966762 D identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029; ribosomal protein S20 966502..966762 Gardnerella vaginalis 409-05 8709411 YP_003374072.1 CDS HMPREF0424_0855 NC_013721.1 966834 966971 R identified by glimmer; putative; hypothetical protein complement(966834..966971) Gardnerella vaginalis 409-05 8708848 YP_003374073.1 CDS HMPREF0424_0856 NC_013721.1 967140 967697 R hypothetical protein complement(967140..967697) Gardnerella vaginalis 409-05 8708959 YP_003374074.1 CDS HMPREF0424_0857 NC_013721.1 968557 969285 R identified by match to protein family HMM PF03458; hypothetical protein complement(968557..969285) Gardnerella vaginalis 409-05 8709511 YP_003374075.1 CDS ilvE NC_013721.1 969411 970580 R identified by match to protein family HMM PF01063; match to protein family HMM TIGR01123; branched-chain-amino-acid transaminase complement(969411..970580) Gardnerella vaginalis 409-05 8709771 YP_003374076.1 CDS HMPREF0424_0859 NC_013721.1 970826 971449 R identified by match to protein family HMM PF01386; match to protein family HMM TIGR00731; ribosomal protein L25, Ctc-form complement(970826..971449) Gardnerella vaginalis 409-05 8709097 YP_003374077.1 CDS HMPREF0424_0860 NC_013721.1 971776 973824 D identified by match to protein family HMM PF00501; AMP-binding enzyme 971776..973824 Gardnerella vaginalis 409-05 8709848 YP_003374078.1 CDS era NC_013721.1 974005 975066 R identified by match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; GTP-binding protein Era complement(974005..975066) Gardnerella vaginalis 409-05 8709490 YP_003374079.1 CDS HMPREF0424_0862 NC_013721.1 975089 976588 R identified by match to protein family HMM PF00571; match to protein family HMM PF03471; CBS domain protein complement(975089..976588) Gardnerella vaginalis 409-05 8710023 YP_003374080.1 CDS ybeY NC_013721.1 976609 977169 R identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotein, YbeY family complement(976609..977169) Gardnerella vaginalis 409-05 8709626 YP_003374081.1 CDS HMPREF0424_0864 NC_013721.1 977173 978366 R identified by match to protein family HMM PF02562; PhoH family protein complement(977173..978366) Gardnerella vaginalis 409-05 8708783 YP_003374082.1 CDS HMPREF0424_0865 NC_013721.1 978370 978732 R identified by match to protein family HMM PF01230; histidine triad domain protein complement(978370..978732) Gardnerella vaginalis 409-05 8709861 YP_003374083.1 CDS HMPREF0424_0866 NC_013721.1 978845 979642 R identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046; RNA methyltransferase, RsmE family complement(978845..979642) Gardnerella vaginalis 409-05 8708804 YP_003374084.1 CDS HMPREF0424_0867 NC_013721.1 979737 980813 D identified by match to protein family HMM TIGR00384; putative succinate dehydrogenase iron-sulfur subunit 979737..980813 Gardnerella vaginalis 409-05 8709980 YP_003374085.1 CDS HMPREF0424_0868 NC_013721.1 980815 981615 R identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein complement(980815..981615) Gardnerella vaginalis 409-05 8709400 YP_003374086.1 CDS HMPREF0424_0869 NC_013721.1 981667 982926 R identified by match to protein family HMM PF06965; putative Na+/H+ antiporter NhaA complement(981667..982926) Gardnerella vaginalis 409-05 8709937 YP_003374087.1 CDS HMPREF0424_0870 NC_013721.1 983232 984128 R hypothetical protein complement(983232..984128) Gardnerella vaginalis 409-05 8709524 YP_003374088.1 CDS HMPREF0424_0871 NC_013721.1 984221 986119 R hypothetical protein complement(984221..986119) Gardnerella vaginalis 409-05 8709435 YP_003374089.1 CDS HMPREF0424_0872 NC_013721.1 987304 988521 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00900; H+ Antiporter protein 987304..988521 Gardnerella vaginalis 409-05 8709051 YP_003374090.1 CDS HMPREF0424_0873 NC_013721.1 988641 990104 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 988641..990104 Gardnerella vaginalis 409-05 8709952 YP_003374091.1 CDS HMPREF0424_0874 NC_013721.1 991036 993360 D identified by match to protein family HMM PF03288; match to protein family HMM PF08706; match to protein family HMM TIGR01613; nucleoside triphosphatase, D5 family 991036..993360 Gardnerella vaginalis 409-05 8708911 YP_003374092.1 CDS HMPREF0424_0875 NC_013721.1 993779 994726 D identified by match to protein family HMM PF05065; phage capsid family protein 993779..994726 Gardnerella vaginalis 409-05 8709352 YP_003374093.1 CDS HMPREF0424_0876 NC_013721.1 994984 996636 D identified by match to protein family HMM PF00239; match to protein family HMM PF07508; TnpX site-specific recombinase family protein 994984..996636 Gardnerella vaginalis 409-05 8709740 YP_003374094.1 CDS clpP_1 NC_013721.1 996958 997632 R identified by match to protein family HMM PF00574; Clp protease complement(996958..997632) Gardnerella vaginalis 409-05 8710072 YP_003374095.1 CDS clpP_2 NC_013721.1 997635 998246 R identified by match to protein family HMM PF00574; Clp protease complement(997635..998246) Gardnerella vaginalis 409-05 8709903 YP_003374096.1 CDS HMPREF0424_0880 NC_013721.1 998461 999249 D identified by glimmer; putative; hypothetical protein 998461..999249 Gardnerella vaginalis 409-05 8709747 YP_003374097.1 CDS HMPREF0424_0881 NC_013721.1 999386 1000783 R identified by match to protein family HMM PF00654; chloride transporter, ClC family complement(999386..1000783) Gardnerella vaginalis 409-05 8709645 YP_003374098.1 CDS tig NC_013721.1 1000933 1002282 R identified by match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115; trigger factor complement(1000933..1002282) Gardnerella vaginalis 409-05 8708926 YP_003374099.1 CDS HMPREF0424_0883 NC_013721.1 1002336 1003766 R identified by match to protein family HMM PF00570; match to protein family HMM PF01612; 3'-5' exonuclease complement(1002336..1003766) Gardnerella vaginalis 409-05 8709449 YP_003374100.1 CDS HMPREF0424_0884 NC_013721.1 1003958 1004338 R identified by glimmer; putative; hypothetical protein complement(1003958..1004338) Gardnerella vaginalis 409-05 8709423 YP_003374101.1 CDS pflA NC_013721.1 1004485 1005366 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase 1-activating enzyme complement(1004485..1005366) Gardnerella vaginalis 409-05 8709377 YP_003374102.1 CDS pflB NC_013721.1 1005477 1007852 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate C-acetyltransferase complement(1005477..1007852) Gardnerella vaginalis 409-05 8709879 YP_003374103.1 CDS nadE NC_013721.1 1007970 1009682 R identified by match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM PF06508; match to protein family HMM TIGR00552; NAD+ synthetase complement(1007970..1009682) Gardnerella vaginalis 409-05 8709190 YP_003374104.1 CDS HMPREF0424_0888 NC_013721.1 1009904 1010737 D identified by match to protein family HMM PF03180; NLPA lipoprotein 1009904..1010737 Gardnerella vaginalis 409-05 8709752 YP_003374105.1 CDS HMPREF0424_0889 NC_013721.1 1010930 1011778 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1010930..1011778 Gardnerella vaginalis 409-05 8709262 YP_003374106.1 CDS HMPREF0424_0890 NC_013721.1 1011781 1012461 D identified by match to protein family HMM PF00528; ABC transporter permease 1011781..1012461 Gardnerella vaginalis 409-05 8709768 YP_003374107.1 CDS thiC NC_013721.1 1012629 1015286 D identified by match to protein family HMM PF01964; match to protein family HMM PF02581; match to protein family HMM TIGR00190; thiamine biosynthesis protein ThiC 1012629..1015286 Gardnerella vaginalis 409-05 8709229 YP_003374108.1 CDS HMPREF0424_0893 NC_013721.1 1015617 1016153 R identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase, cyclophilin-type complement(1015617..1016153) Gardnerella vaginalis 409-05 8709642 YP_003374109.1 CDS HMPREF0424_0894 NC_013721.1 1016389 1018539 R LPXTG-motif cell wall anchor domain protein complement(1016389..1018539) Gardnerella vaginalis 409-05 8708943 YP_003374110.1 CDS HMPREF0424_0897 NC_013721.1 1022530 1022646 D identified by glimmer; putative; hypothetical protein 1022530..1022646 Gardnerella vaginalis 409-05 8709880 YP_003374111.1 CDS HMPREF0424_0896 NC_013721.1 1022639 1023469 R identified by match to protein family HMM PF00459; inositol monophosphatase family protein complement(1022639..1023469) Gardnerella vaginalis 409-05 8709450 YP_003374112.1 CDS serB NC_013721.1 1023696 1024370 R identified by match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase SerB complement(1023696..1024370) Gardnerella vaginalis 409-05 8709328 YP_003374113.1 CDS fmt NC_013721.1 1024375 1025358 R identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase complement(1024375..1025358) Gardnerella vaginalis 409-05 8708902 YP_003374114.1 CDS HMPREF0424_0900 NC_013721.1 1025405 1026556 R identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; putative chaperone protein DnaJ complement(1025405..1026556) Gardnerella vaginalis 409-05 8709588 YP_003374115.1 CDS hrcA NC_013721.1 1026647 1027684 R identified by match to protein family HMM PF01628; match to protein family HMM TIGR00331; heat-inducible transcription repressor HrcA complement(1026647..1027684) Gardnerella vaginalis 409-05 8709919 YP_003374116.1 CDS tkt NC_013721.1 1027883 1029982 D identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 1027883..1029982 Gardnerella vaginalis 409-05 8709342 YP_003374117.1 CDS tal NC_013721.1 1030251 1031354 D identified by match to protein family HMM PF00923; match to protein family HMM TIGR00876; transaldolase 1030251..1031354 Gardnerella vaginalis 409-05 8709702 YP_003374118.1 CDS HMPREF0424_0904 NC_013721.1 1031614 1033245 R identified by match to protein family HMM PF04326; divergent AAA domain protein complement(1031614..1033245) Gardnerella vaginalis 409-05 8709350 YP_003374119.1 CDS HMPREF0424_0905 NC_013721.1 1033506 1034333 R identified by match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR01484; HAD hydrolase, family IIB complement(1033506..1034333) Gardnerella vaginalis 409-05 8709617 YP_003374120.1 CDS secG NC_013721.1 1034440 1034688 R identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase, SecG subunit complement(1034440..1034688) Gardnerella vaginalis 409-05 8708853 YP_003374121.1 CDS tpiA NC_013721.1 1034741 1035538 R identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419; triose-phosphate isomerase complement(1034741..1035538) Gardnerella vaginalis 409-05 8709123 YP_003374122.1 CDS pgk NC_013721.1 1035703 1036908 R identified by match to protein family HMM PF00162; phosphoglycerate kinase complement(1035703..1036908) Gardnerella vaginalis 409-05 8709067 YP_003374123.1 CDS HMPREF0424_0909 NC_013721.1 1037935 1038882 R identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein complement(1037935..1038882) Gardnerella vaginalis 409-05 8709973 YP_003374124.1 CDS HMPREF0424_0910 NC_013721.1 1039156 1040115 R identified by match to protein family HMM PF03668; ATPase, AAA family complement(1039156..1040115) Gardnerella vaginalis 409-05 8709394 YP_003374125.1 CDS HMPREF0424_0911 NC_013721.1 1040112 1041305 R identified by match to protein family HMM PF08501; shikimate dehydrogenase substrate binding domain protein complement(1040112..1041305) Gardnerella vaginalis 409-05 8708841 YP_003374126.1 CDS HMPREF0424_0912 NC_013721.1 1041328 1043748 R hypothetical protein complement(1041328..1043748) Gardnerella vaginalis 409-05 8709069 YP_003374127.1 CDS metK NC_013721.1 1043821 1045038 R identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; methionine adenosyltransferase complement(1043821..1045038) Gardnerella vaginalis 409-05 8709100 YP_003374128.1 CDS rpoZ NC_013721.1 1045177 1045461 R identified by match to protein family HMM TIGR00690; DNA-directed RNA polymerase, omega subunit complement(1045177..1045461) Gardnerella vaginalis 409-05 8708903 YP_003374129.1 CDS gmk NC_013721.1 1045544 1046152 R identified by match to protein family HMM PF00625; match to protein family HMM TIGR03263; guanylate kinase complement(1045544..1046152) Gardnerella vaginalis 409-05 8709613 YP_003374130.1 CDS pyrF_1 NC_013721.1 1046168 1047079 R identified by match to protein family HMM PF00215; match to protein family HMM TIGR02127; orotidine 5'-phosphate decarboxylase complement(1046168..1047079) Gardnerella vaginalis 409-05 8709241 YP_003374131.1 CDS carB NC_013721.1 1047083 1050478 R identified by match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369; carbamoyl-phosphate synthase, large subunit complement(1047083..1050478) Gardnerella vaginalis 409-05 8709960 YP_003374132.1 CDS carA NC_013721.1 1050511 1051722 R identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; carbamoyl-phosphate synthase, small subunit complement(1050511..1051722) Gardnerella vaginalis 409-05 8709157 YP_003374133.1 CDS nusB NC_013721.1 1051809 1052291 R identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB complement(1051809..1052291) Gardnerella vaginalis 409-05 8709862 YP_003374134.1 CDS efp NC_013721.1 1052459 1053022 R identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR00038; translation elongation factor P complement(1052459..1053022) Gardnerella vaginalis 409-05 8708918 YP_003374135.1 CDS HMPREF0424_0922 NC_013721.1 1053152 1053541 D identified by match to protein family HMM PF03733; hypothetical protein 1053152..1053541 Gardnerella vaginalis 409-05 8708887 YP_003374136.1 CDS pyrE NC_013721.1 1053517 1054209 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR00336; orotate phosphoribosyltransferase complement(1053517..1054209) Gardnerella vaginalis 409-05 8709047 YP_003374137.1 CDS HMPREF0424_0923 NC_013721.1 1054306 1055307 R identified by match to protein family HMM PF01180; match to protein family HMM TIGR01037; dihydroorotate dehydrogenase 1B complement(1054306..1055307) Gardnerella vaginalis 409-05 8709427 YP_003374138.1 CDS HMPREF0424_0924 NC_013721.1 1055313 1056209 R identified by match to protein family HMM PF00175; putative dihydroorotate dehydrogenase, electron transfer subunit complement(1055313..1056209) Gardnerella vaginalis 409-05 8709854 YP_003374139.1 CDS pyrF_2 NC_013721.1 1056304 1057347 R identified by match to protein family HMM PF00215; match to protein family HMM TIGR02127; orotidine 5'-phosphate decarboxylase complement(1056304..1057347) Gardnerella vaginalis 409-05 8709863 YP_003374140.1 CDS HMPREF0424_0926 NC_013721.1 1057382 1058794 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR00857; putative dihydroorotase complement(1057382..1058794) Gardnerella vaginalis 409-05 8709325 YP_003374141.1 CDS pyrB NC_013721.1 1058850 1060085 R identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; aspartate carbamoyltransferase complement(1058850..1060085) Gardnerella vaginalis 409-05 8709869 YP_003374142.1 CDS HMPREF0424_0929 NC_013721.1 1060562 1060795 R identified by glimmer; putative; hypothetical protein complement(1060562..1060795) Gardnerella vaginalis 409-05 8708967 YP_003374143.1 CDS glnE NC_013721.1 1060876 1064064 R identified by match to protein family HMM PF03710; [glutamate--ammonia-ligase] adenylyltransferase complement(1060876..1064064) Gardnerella vaginalis 409-05 8709246 YP_003374144.1 CDS HMPREF0424_0931 NC_013721.1 1064361 1071290 R identified by match to protein family HMM PF07554; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain protein complement(1064361..1071290) Gardnerella vaginalis 409-05 8709954 YP_003374145.1 CDS HMPREF0424_0932 NC_013721.1 1071938 1072060 D identified by glimmer; putative; hypothetical protein 1071938..1072060 Gardnerella vaginalis 409-05 8709216 YP_003374146.1 CDS metF NC_013721.1 1072121 1072975 R identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; methylenetetrahydrofolate reductase complement(1072121..1072975) Gardnerella vaginalis 409-05 8709936 YP_003374147.1 CDS metE NC_013721.1 1072979 1075333 R identified by match to protein family HMM PF01717; match to protein family HMM PF08267; match to protein family HMM TIGR01371; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase complement(1072979..1075333) Gardnerella vaginalis 409-05 8708944 YP_003374148.1 CDS HMPREF0424_0935 NC_013721.1 1075923 1076480 R identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein complement(1075923..1076480) Gardnerella vaginalis 409-05 8709745 YP_003374149.1 CDS HMPREF0424_0936 NC_013721.1 1076490 1077641 R identified by match to protein family HMM PF08704; tRNA methyltransferase complex GCD14 subunit complement(1076490..1077641) Gardnerella vaginalis 409-05 8709959 YP_003374150.1 CDS HMPREF0424_0937 NC_013721.1 1077685 1078728 R identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; match to protein family HMM TIGR03723; putative glycoprotease GCP complement(1077685..1078728) Gardnerella vaginalis 409-05 8709235 YP_003374151.1 CDS rimI NC_013721.1 1078750 1079280 R identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase complement(1078750..1079280) Gardnerella vaginalis 409-05 8708879 YP_003374152.1 CDS yeaZ NC_013721.1 1079306 1080133 R identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725; hypothetical protein complement(1079306..1080133) Gardnerella vaginalis 409-05 8709985 YP_003374153.1 CDS HMPREF0424_0940 NC_013721.1 1080247 1080819 R identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; ATPase, YjeE family complement(1080247..1080819) Gardnerella vaginalis 409-05 8709318 YP_003374154.1 CDS HMPREF0424_0941 NC_013721.1 1080891 1081937 R identified by match to protein family HMM PF06144; putative DNA polymerase III, delta subunit complement(1080891..1081937) Gardnerella vaginalis 409-05 8709934 YP_003374155.1 CDS HMPREF0424_0942 NC_013721.1 1082006 1083694 R identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; ComEC/Rec2-like protein complement(1082006..1083694) Gardnerella vaginalis 409-05 8709187 YP_003374156.1 CDS HMPREF0424_0943 NC_013721.1 1083702 1084490 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; comEA protein complement(1083702..1084490) Gardnerella vaginalis 409-05 8709756 YP_003374157.1 CDS leuS NC_013721.1 1084873 1087857 R identified by match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; leucine--tRNA ligase complement(1084873..1087857) Gardnerella vaginalis 409-05 8708958 YP_003374158.1 CDS HMPREF0424_0945 NC_013721.1 1088098 1088538 D hypothetical protein 1088098..1088538 Gardnerella vaginalis 409-05 8709551 YP_003374159.1 CDS HMPREF0424_0946 NC_013721.1 1088613 1089056 D hypothetical protein 1088613..1089056 Gardnerella vaginalis 409-05 8709010 YP_003374160.1 CDS HMPREF0424_0947 NC_013721.1 1089103 1089954 D identified by match to protein family HMM PF03881; fructosamine kinase 1089103..1089954 Gardnerella vaginalis 409-05 8709388 YP_003374161.1 CDS HMPREF0424_0948 NC_013721.1 1090078 1091787 D putative lipoprotein 1090078..1091787 Gardnerella vaginalis 409-05 8709390 YP_003374162.1 CDS HMPREF0424_0949 NC_013721.1 1091901 1093712 R identified by match to protein family HMM PF00501; AMP-binding enzyme complement(1091901..1093712) Gardnerella vaginalis 409-05 8709586 YP_003374163.1 CDS HMPREF0424_0950 NC_013721.1 1093855 1094472 R identified by match to protein family HMM PF01551; peptidase, M23 family complement(1093855..1094472) Gardnerella vaginalis 409-05 8709202 YP_003374164.1 CDS HMPREF0424_0953 NC_013721.1 1094936 1095817 D identified by glimmer; putative; hypothetical protein 1094936..1095817 Gardnerella vaginalis 409-05 8710050 YP_003374165.1 CDS lysP NC_013721.1 1095933 1097423 R identified by match to protein family HMM PF00324; lysine-specific permease complement(1095933..1097423) Gardnerella vaginalis 409-05 8709734 YP_003374166.1 CDS HMPREF0424_0956 NC_013721.1 1098195 1099166 D identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 1098195..1099166 Gardnerella vaginalis 409-05 8709346 YP_003374167.1 CDS HMPREF0424_0957 NC_013721.1 1099419 1100147 R identified by glimmer; putative; hypothetical protein complement(1099419..1100147) Gardnerella vaginalis 409-05 8709908 YP_003374168.1 CDS HMPREF0424_0958 NC_013721.1 1100563 1100805 R identified by match to protein family HMM PF01381; DNA-binding protein complement(1100563..1100805) Gardnerella vaginalis 409-05 8708856 YP_003374169.1 CDS HMPREF0424_0959 NC_013721.1 1101012 1101245 D hypothetical protein 1101012..1101245 Gardnerella vaginalis 409-05 8709667 YP_003374170.1 CDS HMPREF0424_0960 NC_013721.1 1101364 1101546 D hypothetical protein 1101364..1101546 Gardnerella vaginalis 409-05 8709690 YP_003374171.1 CDS HMPREF0424_0961 NC_013721.1 1102004 1102279 D hypothetical protein 1102004..1102279 Gardnerella vaginalis 409-05 8709486 YP_003374172.1 CDS HMPREF0424_0962 NC_013721.1 1102317 1102550 R identified by glimmer; putative; hypothetical protein complement(1102317..1102550) Gardnerella vaginalis 409-05 8708761 YP_003374173.1 CDS HMPREF0424_0963 NC_013721.1 1103135 1103347 D identified by match to protein family HMM TIGR03544; DivIVA domain protein 1103135..1103347 Gardnerella vaginalis 409-05 8709628 YP_003374174.1 CDS HMPREF0424_0964 NC_013721.1 1103756 1104034 D identified by glimmer; putative; hypothetical protein 1103756..1104034 Gardnerella vaginalis 409-05 8708991 YP_003374175.1 CDS HMPREF0424_0965 NC_013721.1 1104059 1104370 D identified by glimmer; putative; hypothetical protein 1104059..1104370 Gardnerella vaginalis 409-05 8709209 YP_003374176.1 CDS HMPREF0424_0966 NC_013721.1 1104684 1104890 D identified by glimmer; putative; hypothetical protein 1104684..1104890 Gardnerella vaginalis 409-05 8709963 YP_003374177.1 CDS HMPREF0424_0967 NC_013721.1 1104887 1105750 D identified by glimmer; putative; hypothetical protein 1104887..1105750 Gardnerella vaginalis 409-05 8709273 YP_003374178.1 CDS HMPREF0424_0968 NC_013721.1 1106435 1106602 D identified by glimmer; putative; hypothetical protein 1106435..1106602 Gardnerella vaginalis 409-05 8709901 YP_003374179.1 CDS HMPREF0424_0969 NC_013721.1 1106599 1106928 D identified by glimmer; putative; hypothetical protein 1106599..1106928 Gardnerella vaginalis 409-05 8709502 YP_003374180.1 CDS HMPREF0424_0970 NC_013721.1 1106925 1107329 D hypothetical protein 1106925..1107329 Gardnerella vaginalis 409-05 8709707 YP_003374181.1 CDS HMPREF0424_0971 NC_013721.1 1107971 1108639 D identified by glimmer; putative; hypothetical protein 1107971..1108639 Gardnerella vaginalis 409-05 8709649 YP_003374182.1 CDS HMPREF0424_0972 NC_013721.1 1109014 1109391 D identified by glimmer; putative; hypothetical protein 1109014..1109391 Gardnerella vaginalis 409-05 8709200 YP_003374183.1 CDS HMPREF0424_0973 NC_013721.1 1109381 1109647 D identified by glimmer; putative; hypothetical protein 1109381..1109647 Gardnerella vaginalis 409-05 8708794 YP_003374184.1 CDS HMPREF0424_0974 NC_013721.1 1109647 1109814 D hypothetical protein 1109647..1109814 Gardnerella vaginalis 409-05 8709891 YP_003374185.1 CDS HMPREF0424_0975 NC_013721.1 1109827 1110384 D identified by glimmer; putative; hypothetical protein 1109827..1110384 Gardnerella vaginalis 409-05 8709112 YP_003374186.1 CDS HMPREF0424_0976 NC_013721.1 1110545 1110694 R identified by glimmer; putative; hypothetical protein complement(1110545..1110694) Gardnerella vaginalis 409-05 8709807 YP_003374187.1 CDS HMPREF0424_0977 NC_013721.1 1111055 1111171 R identified by glimmer; putative; hypothetical protein complement(1111055..1111171) Gardnerella vaginalis 409-05 8709492 YP_003374188.1 CDS HMPREF0424_0978 NC_013721.1 1111183 1111509 R identified by glimmer; putative; hypothetical protein complement(1111183..1111509) Gardnerella vaginalis 409-05 8709381 YP_003374189.1 CDS HMPREF0424_0979 NC_013721.1 1111846 1112886 R identified by glimmer; putative; hypothetical protein complement(1111846..1112886) Gardnerella vaginalis 409-05 8710006 YP_003374190.1 CDS HMPREF0424_0980 NC_013721.1 1112924 1113493 R identified by glimmer; putative; hypothetical protein complement(1112924..1113493) Gardnerella vaginalis 409-05 8709193 YP_003374191.1 CDS HMPREF0424_0981 NC_013721.1 1115133 1115657 D hypothetical protein 1115133..1115657 Gardnerella vaginalis 409-05 8709568 YP_003374192.1 CDS HMPREF0424_0982 NC_013721.1 1115650 1116777 D hypothetical protein 1115650..1116777 Gardnerella vaginalis 409-05 8709447 YP_003374193.1 CDS HMPREF0424_0983 NC_013721.1 1116825 1117433 D hypothetical protein 1116825..1117433 Gardnerella vaginalis 409-05 8708896 YP_003374194.1 CDS HMPREF0424_0984 NC_013721.1 1117430 1118806 D identified by glimmer; putative; hypothetical protein 1117430..1118806 Gardnerella vaginalis 409-05 8709289 YP_003374195.1 CDS HMPREF0424_0985 NC_013721.1 1118796 1119941 D identified by glimmer; putative; hypothetical protein 1118796..1119941 Gardnerella vaginalis 409-05 8709806 YP_003374196.1 CDS HMPREF0424_0986 NC_013721.1 1119969 1120592 D identified by glimmer; putative; hypothetical protein 1119969..1120592 Gardnerella vaginalis 409-05 8709744 YP_003374197.1 CDS HMPREF0424_0987 NC_013721.1 1120610 1121464 D hypothetical protein 1120610..1121464 Gardnerella vaginalis 409-05 8708791 YP_003374198.1 CDS HMPREF0424_0988 NC_013721.1 1121467 1122045 D identified by glimmer; putative; hypothetical protein 1121467..1122045 Gardnerella vaginalis 409-05 8709515 YP_003374199.1 CDS HMPREF0424_0989 NC_013721.1 1122042 1122506 D identified by glimmer; putative; hypothetical protein 1122042..1122506 Gardnerella vaginalis 409-05 8709506 YP_003374200.1 CDS HMPREF0424_0990 NC_013721.1 1122493 1122864 D identified by glimmer; putative; hypothetical protein 1122493..1122864 Gardnerella vaginalis 409-05 8708942 YP_003374201.1 CDS HMPREF0424_0991 NC_013721.1 1122861 1123262 D identified by glimmer; putative; hypothetical protein 1122861..1123262 Gardnerella vaginalis 409-05 8709659 YP_003374202.1 CDS HMPREF0424_0992 NC_013721.1 1123271 1123852 D hypothetical protein 1123271..1123852 Gardnerella vaginalis 409-05 8709762 YP_003374203.1 CDS HMPREF0424_0993 NC_013721.1 1123995 1124495 D identified by glimmer; putative; hypothetical protein 1123995..1124495 Gardnerella vaginalis 409-05 8709694 YP_003374204.1 CDS HMPREF0424_0994 NC_013721.1 1124861 1128382 D identified by match to protein family HMM TIGR01760; phage tail tape measure protein, TP901 family 1124861..1128382 Gardnerella vaginalis 409-05 8708969 YP_003374205.1 CDS HMPREF0424_0995 NC_013721.1 1128386 1129135 D identified by glimmer; putative; hypothetical protein 1128386..1129135 Gardnerella vaginalis 409-05 8709376 YP_003374206.1 CDS HMPREF0424_0998 NC_013721.1 1131889 1132086 D identified by glimmer; putative; hypothetical protein 1131889..1132086 Gardnerella vaginalis 409-05 8709684 YP_003374207.1 CDS HMPREF0424_0999 NC_013721.1 1132076 1132222 D hypothetical protein 1132076..1132222 Gardnerella vaginalis 409-05 8709055 YP_003374208.1 CDS HMPREF0424_1000 NC_013721.1 1132215 1134185 D identified by glimmer; putative; hypothetical protein 1132215..1134185 Gardnerella vaginalis 409-05 8709173 YP_003374209.1 CDS HMPREF0424_1001 NC_013721.1 1134195 1134887 D identified by glimmer; putative; hypothetical protein 1134195..1134887 Gardnerella vaginalis 409-05 8709546 YP_003374210.1 CDS HMPREF0424_1002 NC_013721.1 1135477 1136472 D identified by match to protein family HMM PF01183; glycosyl hydrolase family 25 1135477..1136472 Gardnerella vaginalis 409-05 8709337 YP_003374211.1 CDS HMPREF0424_1003 NC_013721.1 1136492 1136968 D identified by glimmer; putative; hypothetical protein 1136492..1136968 Gardnerella vaginalis 409-05 8709764 YP_003374212.1 CDS HMPREF0424_1004 NC_013721.1 1137063 1137212 R identified by glimmer; putative; hypothetical protein complement(1137063..1137212) Gardnerella vaginalis 409-05 8709770 YP_003374213.1 CDS HMPREF0424_1006 NC_013721.1 1137466 1138542 R hypothetical protein complement(1137466..1138542) Gardnerella vaginalis 409-05 8710067 YP_003374214.1 CDS HMPREF0424_1007 NC_013721.1 1138733 1139740 R identified by match to protein family HMM PF00892; hypothetical protein complement(1138733..1139740) Gardnerella vaginalis 409-05 8709776 YP_003374215.1 CDS HMPREF0424_1008 NC_013721.1 1140086 1140490 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein 1140086..1140490 Gardnerella vaginalis 409-05 8709541 YP_003374216.1 CDS HMPREF0424_1009 NC_013721.1 1140805 1141254 R identified by glimmer; putative; hypothetical protein complement(1140805..1141254) Gardnerella vaginalis 409-05 8709913 YP_003374217.1 CDS HMPREF0424_1010 NC_013721.1 1141366 1141875 R identified by match to protein family HMM PF04397; LytTr DNA-binding domain protein complement(1141366..1141875) Gardnerella vaginalis 409-05 8709556 YP_003374218.1 CDS HMPREF0424_1011 NC_013721.1 1142014 1142832 R identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein complement(1142014..1142832) Gardnerella vaginalis 409-05 8709015 YP_003374219.1 CDS HMPREF0424_1012 NC_013721.1 1142857 1143279 R identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; iojap-like protein complement(1142857..1143279) Gardnerella vaginalis 409-05 8709928 YP_003374220.1 CDS glmU NC_013721.1 1143316 1144725 R identified by match to protein family HMM PF00483; match to protein family HMM PF01128; match to protein family HMM TIGR01173; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase complement(1143316..1144725) Gardnerella vaginalis 409-05 8709189 YP_003374221.1 CDS prs_1 NC_013721.1 1145002 1146036 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate diphosphokinase complement(1145002..1146036) Gardnerella vaginalis 409-05 8710047 YP_003374222.1 CDS nadD NC_013721.1 1146121 1146933 R identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; nicotinate-nucleotide adenylyltransferase complement(1146121..1146933) Gardnerella vaginalis 409-05 8709708 YP_003374223.1 CDS HMPREF0424_1017 NC_013721.1 1146923 1147441 R hypothetical protein complement(1146923..1147441) Gardnerella vaginalis 409-05 8708808 YP_003374224.1 CDS proA NC_013721.1 1147480 1148757 R identified by match to protein family HMM PF00171; match to protein family HMM TIGR00407; glutamate-5-semialdehyde dehydrogenase complement(1147480..1148757) Gardnerella vaginalis 409-05 8710000 YP_003374225.1 CDS thrC NC_013721.1 1148957 1150483 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260; threonine synthase 1148957..1150483 Gardnerella vaginalis 409-05 8709574 YP_003374226.1 CDS recX NC_013721.1 1150543 1151211 R identified by match to protein family HMM PF02631; regulatory protein RecX complement(1150543..1151211) Gardnerella vaginalis 409-05 8708964 YP_003374227.1 CDS recA NC_013721.1 1151243 1152382 R identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012; RecA protein complement(1151243..1152382) Gardnerella vaginalis 409-05 8709142 YP_003374228.1 CDS HMPREF0424_1022 NC_013721.1 1152588 1153319 R identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; competence/damage-inducible protein CinA C-terminal domain protein complement(1152588..1153319) Gardnerella vaginalis 409-05 8709851 YP_003374229.1 CDS pgsA NC_013721.1 1153389 1154069 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(1153389..1154069) Gardnerella vaginalis 409-05 8710012 YP_003374230.1 CDS HMPREF0424_1024 NC_013721.1 1154151 1156850 R identified by match to protein family HMM PF01580; match to protein family HMM PF09397; FtsK/SpoIIIE family protein complement(1154151..1156850) Gardnerella vaginalis 409-05 8709285 YP_003374231.1 CDS HMPREF0424_1025 NC_013721.1 1157067 1158080 R identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein complement(1157067..1158080) Gardnerella vaginalis 409-05 8709996 YP_003374232.1 CDS HMPREF0424_1026 NC_013721.1 1158170 1159864 R identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain protein complement(1158170..1159864) Gardnerella vaginalis 409-05 8709053 YP_003374233.1 CDS HMPREF0424_1027 NC_013721.1 1160098 1163808 R identified by glimmer; putative; hypothetical protein complement(1160098..1163808) Gardnerella vaginalis 409-05 8709460 YP_003374234.1 CDS HMPREF0424_1029 NC_013721.1 1164486 1165769 D identified by match to protein family HMM PF01071; match to protein family HMM PF02222; phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein 1164486..1165769 Gardnerella vaginalis 409-05 8710076 YP_003374235.1 CDS purC NC_013721.1 1165945 1166727 D identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1165945..1166727 Gardnerella vaginalis 409-05 8708803 YP_003374236.1 CDS HMPREF0424_1031 NC_013721.1 1166870 1170625 D identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857; phosphoribosylformylglycinamidine synthase 1166870..1170625 Gardnerella vaginalis 409-05 8709341 YP_003374237.1 CDS purF NC_013721.1 1170709 1172196 D identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134; amidophosphoribosyltransferase 1170709..1172196 Gardnerella vaginalis 409-05 8709126 YP_003374238.1 CDS purM NC_013721.1 1172277 1173311 D identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878; phosphoribosylformylglycinamidine cyclo-ligase 1172277..1173311 Gardnerella vaginalis 409-05 8709867 YP_003374239.1 CDS purD NC_013721.1 1173391 1174662 D identified by match to protein family HMM PF01071; match to protein family HMM PF02655; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; phosphoribosylamine--glycine ligase 1173391..1174662 Gardnerella vaginalis 409-05 8709892 YP_003374240.1 CDS HMPREF0424_1035 NC_013721.1 1174779 1176848 R identified by match to protein family HMM PF00884; arylsulfatase complement(1174779..1176848) Gardnerella vaginalis 409-05 8709339 YP_003374241.1 CDS HMPREF0424_1036 NC_013721.1 1177159 1178538 D hypothetical protein 1177159..1178538 Gardnerella vaginalis 409-05 8710002 YP_003374242.1 CDS HMPREF0424_1037 NC_013721.1 1178645 1181203 D identified by match to protein family HMM PF04329; match to protein family HMM PF04330; hypothetical protein 1178645..1181203 Gardnerella vaginalis 409-05 8709803 YP_003374243.1 CDS purE NC_013721.1 1181284 1181781 D identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase, catalytic subunit 1181284..1181781 Gardnerella vaginalis 409-05 8708947 YP_003374244.1 CDS purK NC_013721.1 1181765 1182937 D identified by match to protein family HMM PF02222; match to protein family HMM TIGR01161; phosphoribosylaminoimidazole carboxylase, ATPase subunit 1181765..1182937 Gardnerella vaginalis 409-05 8709661 YP_003374245.1 CDS HMPREF0424_1040 NC_013721.1 1182958 1183362 D identified by match to protein family HMM PF01475; transcriptional regulator, Fur family 1182958..1183362 Gardnerella vaginalis 409-05 8709530 YP_003374246.1 CDS HMPREF0424_1042 NC_013721.1 1183640 1184836 R identified by match to protein family HMM PF03600; citrate transporter complement(1183640..1184836) Gardnerella vaginalis 409-05 8710058 YP_003374247.1 CDS HMPREF0424_1043 NC_013721.1 1185089 1186840 D identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; acetolactate synthase 1185089..1186840 Gardnerella vaginalis 409-05 8709355 YP_003374248.1 CDS HMPREF0424_1044 NC_013721.1 1186974 1187939 R identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase complement(1186974..1187939) Gardnerella vaginalis 409-05 8709761 YP_003374249.1 CDS HMPREF0424_1045 NC_013721.1 1188198 1188809 D hypothetical protein 1188198..1188809 Gardnerella vaginalis 409-05 8709584 YP_003374250.1 CDS HMPREF0424_1046 NC_013721.1 1188864 1189670 D identified by match to protein family HMM PF02361; cobalt transport protein 1188864..1189670 Gardnerella vaginalis 409-05 8708973 YP_003374251.1 CDS HMPREF0424_1048 NC_013721.1 1190492 1191337 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1190492..1191337 Gardnerella vaginalis 409-05 8708798 YP_003374252.1 CDS HMPREF0424_1049 NC_013721.1 1191384 1194518 R identified by match to protein family HMM PF01074; match to protein family HMM PF07748; match to protein family HMM PF09261; glycosyl hydrolase family 38 N-terminal domain protein complement(1191384..1194518) Gardnerella vaginalis 409-05 8709623 YP_003374253.1 CDS dnaG NC_013721.1 1194609 1196765 R identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391; DNA primase complement(1194609..1196765) Gardnerella vaginalis 409-05 8708989 YP_003374254.1 CDS HMPREF0424_1051 NC_013721.1 1196759 1198042 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR01353; putative dGTPase complement(1196759..1198042) Gardnerella vaginalis 409-05 8709420 YP_003374255.1 CDS alr NC_013721.1 1198105 1199484 R identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase complement(1198105..1199484) Gardnerella vaginalis 409-05 8708886 YP_003374256.1 CDS HMPREF0424_1053 NC_013721.1 1199570 1200109 R hypothetical protein complement(1199570..1200109) Gardnerella vaginalis 409-05 8709297 YP_003374257.1 CDS luxS NC_013721.1 1200164 1200658 R identified by match to protein family HMM PF02664; S-ribosylhomocysteinase LuxS complement(1200164..1200658) Gardnerella vaginalis 409-05 8709993 YP_003374258.1 CDS HMPREF0424_1055 NC_013721.1 1200775 1202457 R identified by match to protein family HMM PF00005; putative phosphonate C-P lyase system protein PhnK complement(1200775..1202457) Gardnerella vaginalis 409-05 8709054 YP_003374259.1 CDS HMPREF0424_1056 NC_013721.1 1202454 1203338 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1202454..1203338) Gardnerella vaginalis 409-05 8709748 YP_003374260.1 CDS HMPREF0424_1057 NC_013721.1 1203381 1204346 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1203381..1204346) Gardnerella vaginalis 409-05 8708885 YP_003374261.1 CDS HMPREF0424_1058 NC_013721.1 1204566 1206257 R identified by match to protein family HMM PF00496; extracellular solute-binding protein complement(1204566..1206257) Gardnerella vaginalis 409-05 8709360 YP_003374262.1 CDS HMPREF0424_1059 NC_013721.1 1206708 1207646 D identified by match to protein family HMM PF01680; match to protein family HMM PF05690; match to protein family HMM TIGR00343; pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 1206708..1207646 Gardnerella vaginalis 409-05 8708829 YP_003374263.1 CDS pdxT NC_013721.1 1207649 1208242 D identified by match to protein family HMM PF01174; match to protein family HMM PF07685; match to protein family HMM TIGR03800; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 1207649..1208242 Gardnerella vaginalis 409-05 8709509 YP_003374264.1 CDS HMPREF0424_1061 NC_013721.1 1208628 1208954 D identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein 1208628..1208954 Gardnerella vaginalis 409-05 8709050 YP_003374265.1 CDS HMPREF0424_1062 NC_013721.1 1209370 1213053 R identified by match to protein family HMM PF03382; match to protein family HMM TIGR02167; LPXTG-motif cell wall anchor domain protein complement(1209370..1213053) Gardnerella vaginalis 409-05 8709441 YP_003374266.1 CDS HMPREF0424_1063 NC_013721.1 1213245 1214012 R identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671; pantothenate kinase complement(1213245..1214012) Gardnerella vaginalis 409-05 8709081 YP_003374267.1 CDS HMPREF0424_1064 NC_013721.1 1214195 1215637 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1214195..1215637) Gardnerella vaginalis 409-05 8709615 YP_003374268.1 CDS glmS NC_013721.1 1215672 1217579 R identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glutamine-fructose-6-phosphate transaminase (isomerizing) complement(1215672..1217579) Gardnerella vaginalis 409-05 8709221 YP_003374269.1 CDS HMPREF0424_1066 NC_013721.1 1217675 1218463 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1217675..1218463) Gardnerella vaginalis 409-05 8709976 YP_003374270.1 CDS HMPREF0424_1067 NC_013721.1 1218548 1219549 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; ABC transporter permease complement(1218548..1219549) Gardnerella vaginalis 409-05 8709239 YP_003374271.1 CDS HMPREF0424_1068 NC_013721.1 1219694 1220602 R identified by match to protein family HMM PF00497; extracellular solute-binding protein complement(1219694..1220602) Gardnerella vaginalis 409-05 8709452 YP_003374272.1 CDS smpB NC_013721.1 1220879 1221376 R identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086; SsrA-binding protein complement(1220879..1221376) Gardnerella vaginalis 409-05 8709902 YP_003374273.1 CDS HMPREF0424_1070 NC_013721.1 1221510 1222916 R identified by match to protein family HMM PF05257; CHAP domain protein complement(1221510..1222916) Gardnerella vaginalis 409-05 8709103 YP_003374274.1 CDS HMPREF0424_1071 NC_013721.1 1223063 1223986 R identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein complement(1223063..1223986) Gardnerella vaginalis 409-05 8709653 YP_003374275.1 CDS ftsE NC_013721.1 1223986 1225449 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE complement(1223986..1225449) Gardnerella vaginalis 409-05 8708953 YP_003374276.1 CDS prfB NC_013721.1 1225513 1226649 R identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2 complement(1225513..1226649) Gardnerella vaginalis 409-05 8709497 YP_003374277.1 CDS map NC_013721.1 1226730 1227503 R identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase, type I complement(1226730..1227503) Gardnerella vaginalis 409-05 8708811 YP_003374278.1 CDS HMPREF0424_1075 NC_013721.1 1227595 1229730 D identified by match to protein family HMM PF01431; match to protein family HMM PF05649; peptidase family M13 1227595..1229730 Gardnerella vaginalis 409-05 8709260 YP_003374279.1 CDS HMPREF0424_1076 NC_013721.1 1231192 1231677 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding family protein 1231192..1231677 Gardnerella vaginalis 409-05 8709813 YP_003374280.1 CDS HMPREF0424_1077 NC_013721.1 1231762 1232307 R identified by glimmer; putative; hypothetical protein complement(1231762..1232307) Gardnerella vaginalis 409-05 8709369 YP_003374281.1 CDS HMPREF0424_1078 NC_013721.1 1232475 1233437 R hypothetical protein complement(1232475..1233437) Gardnerella vaginalis 409-05 8709789 YP_003374282.1 CDS proS NC_013721.1 1234123 1235955 R identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00409; proline--tRNA ligase complement(1234123..1235955) Gardnerella vaginalis 409-05 8709380 YP_003374283.1 CDS HMPREF0424_1080 NC_013721.1 1236118 1237575 R hypothetical protein complement(1236118..1237575) Gardnerella vaginalis 409-05 8708957 YP_003374284.1 CDS HMPREF0424_1081 NC_013721.1 1237633 1238340 R identified by match to protein family HMM PF00929; exonuclease complement(1237633..1238340) Gardnerella vaginalis 409-05 8709210 YP_003374285.1 CDS guaB NC_013721.1 1238495 1240039 R identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase complement(1238495..1240039) Gardnerella vaginalis 409-05 8708905 YP_003374286.1 CDS HMPREF0424_1083 NC_013721.1 1240277 1241380 R identified by match to protein family HMM PF00953; glycosyltransferase, group 4 family complement(1240277..1241380) Gardnerella vaginalis 409-05 8709597 YP_003374287.1 CDS HMPREF0424_1084 NC_013721.1 1241508 1242194 R identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein complement(1241508..1242194) Gardnerella vaginalis 409-05 8709268 YP_003374288.1 CDS prmC NC_013721.1 1242308 1243222 R identified by match to protein family HMM PF03602; match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03534; protein-(glutamine-N5) methyltransferase, release factor-specific complement(1242308..1243222) Gardnerella vaginalis 409-05 8709958 YP_003374289.1 CDS prfA NC_013721.1 1243262 1244359 R identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 complement(1243262..1244359) Gardnerella vaginalis 409-05 8709783 YP_003374290.1 CDS rpmE NC_013721.1 1244499 1244711 R identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; ribosomal protein L31 complement(1244499..1244711) Gardnerella vaginalis 409-05 8709110 YP_003374291.1 CDS miaA NC_013721.1 1254476 1255489 R identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA isopentenyltransferase complement(1254476..1255489) Gardnerella vaginalis 409-05 8710079 YP_003374292.1 CDS HMPREF0424_1091 NC_013721.1 1255632 1256441 D identified by match to protein family HMM PF04607; RelA/SpoT domain protein 1255632..1256441 Gardnerella vaginalis 409-05 8709408 YP_003374293.1 CDS HMPREF0424_1092 NC_013721.1 1256626 1257372 D identified by match to protein family HMM PF01027; hypothetical protein 1256626..1257372 Gardnerella vaginalis 409-05 8709995 YP_003374294.1 CDS HMPREF0424_1093 NC_013721.1 1257817 1257954 R identified by glimmer; putative; hypothetical protein complement(1257817..1257954) Gardnerella vaginalis 409-05 8708869 YP_003374295.1 CDS HMPREF0424_1094 NC_013721.1 1258028 1259227 R elongation factor Tu domain protein complement(1258028..1259227) Gardnerella vaginalis 409-05 8709395 YP_003374296.1 CDS HMPREF0424_1095 NC_013721.1 1258424 1259254 D hypothetical protein 1258424..1259254 Gardnerella vaginalis 409-05 8709039 YP_003374297.1 CDS fusA NC_013721.1 1259396 1261525 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G complement(1259396..1261525) Gardnerella vaginalis 409-05 8709550 YP_003374298.1 CDS rpsG NC_013721.1 1261568 1262038 R identified by match to protein family HMM PF00177; match to protein family HMM TIGR01029; 30S ribosomal protein S7 complement(1261568..1262038) Gardnerella vaginalis 409-05 8708888 YP_003374299.1 CDS rpsL NC_013721.1 1262042 1262413 R identified by match to protein family HMM PF00164; match to protein family HMM TIGR00981; 30S ribosomal protein S12 complement(1262042..1262413) Gardnerella vaginalis 409-05 8709431 YP_003374300.1 CDS ftsQ NC_013721.1 1262681 1263919 R identified by match to protein family HMM PF08478; POTRA domain protein, FtsQ-type complement(1262681..1263919) Gardnerella vaginalis 409-05 8709111 YP_003374301.1 CDS murC NC_013721.1 1263972 1265534 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01082; UDP-N-acetylmuramate--L-alanine ligase complement(1263972..1265534) Gardnerella vaginalis 409-05 8709953 YP_003374302.1 CDS HMPREF0424_1101 NC_013721.1 1265534 1266733 R identified by match to protein family HMM PF03033; match to protein family HMM PF04101; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase complement(1265534..1266733) Gardnerella vaginalis 409-05 8709591 YP_003374303.1 CDS HMPREF0424_1102 NC_013721.1 1266784 1268445 R identified by match to protein family HMM PF01098; putative cell division protein FtsW complement(1266784..1268445) Gardnerella vaginalis 409-05 8709830 YP_003374304.1 CDS murD NC_013721.1 1268429 1270030 R identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase complement(1268429..1270030) Gardnerella vaginalis 409-05 8709480 YP_003374305.1 CDS mraY NC_013721.1 1270055 1271158 R identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1270055..1271158) Gardnerella vaginalis 409-05 8709061 YP_003374306.1 CDS murF NC_013721.1 1271237 1272847 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(1271237..1272847) Gardnerella vaginalis 409-05 8709961 YP_003374307.1 CDS HMPREF0424_1106 NC_013721.1 1272918 1273949 R hypothetical protein complement(1272918..1273949) Gardnerella vaginalis 409-05 8709258 YP_003374308.1 CDS HMPREF0424_1107 NC_013721.1 1273992 1275833 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein, transpeptidase domain protein complement(1273992..1275833) Gardnerella vaginalis 409-05 8708868 YP_003374309.1 CDS HMPREF0424_1108 NC_013721.1 1275833 1276474 R hypothetical protein complement(1275833..1276474) Gardnerella vaginalis 409-05 8709356 YP_003374310.1 CDS mraW NC_013721.1 1276476 1277513 R identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW complement(1276476..1277513) Gardnerella vaginalis 409-05 8709912 YP_003374311.1 CDS mraZ NC_013721.1 1277513 1278325 R identified by match to protein family HMM PF02381; match to protein family HMM TIGR00242; protein MraZ complement(1277513..1278325) Gardnerella vaginalis 409-05 8709872 YP_003374312.1 CDS HMPREF0424_1111 NC_013721.1 1278614 1278778 D identified by glimmer; putative; hypothetical protein 1278614..1278778 Gardnerella vaginalis 409-05 8709205 YP_003374313.1 CDS glnA_1 NC_013721.1 1279057 1280394 R identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I complement(1279057..1280394) Gardnerella vaginalis 409-05 8709703 YP_003374314.1 CDS HMPREF0424_1113 NC_013721.1 1280593 1281315 R hypothetical protein complement(1280593..1281315) Gardnerella vaginalis 409-05 8709032 YP_003374315.1 CDS dnaE NC_013721.1 1281397 1284963 R identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha complement(1281397..1284963) Gardnerella vaginalis 409-05 8709009 YP_003374316.1 CDS HMPREF0424_1115 NC_013721.1 1285010 1285975 R identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; pseudouridine synthase, RluA family complement(1285010..1285975) Gardnerella vaginalis 409-05 8709547 YP_003374317.1 CDS lspA NC_013721.1 1285941 1286450 R identified by match to protein family HMM PF01252; signal peptidase II complement(1285941..1286450) Gardnerella vaginalis 409-05 8708860 YP_003374318.1 CDS HMPREF0424_1117 NC_013721.1 1286532 1287860 R identified by match to protein family HMM TIGR03544; DivIVA domain protein complement(1286532..1287860) Gardnerella vaginalis 409-05 8709057 YP_003374319.1 CDS HMPREF0424_1118 NC_013721.1 1288013 1288291 R hypothetical protein complement(1288013..1288291) Gardnerella vaginalis 409-05 8709753 YP_003374320.1 CDS galE NC_013721.1 1288465 1289475 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 1288465..1289475 Gardnerella vaginalis 409-05 8709176 YP_003374321.1 CDS HMPREF0424_1122 NC_013721.1 1289816 1291867 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1289816..1291867) Gardnerella vaginalis 409-05 8710049 YP_003374322.1 CDS HMPREF0424_1123 NC_013721.1 1291870 1293720 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1291870..1293720) Gardnerella vaginalis 409-05 8709896 YP_003374323.1 CDS nrdG NC_013721.1 1294579 1295286 R identified by match to protein family HMM TIGR02491; anaerobic ribonucleoside-triphosphate reductase activating protein complement(1294579..1295286) Gardnerella vaginalis 409-05 8709358 YP_003374324.1 CDS nrdD NC_013721.1 1295507 1297924 R identified by match to protein family HMM PF01228; match to protein family HMM PF03477; match to protein family HMM TIGR02487; anaerobic ribonucleoside-triphosphate reductase complement(1295507..1297924) Gardnerella vaginalis 409-05 8708790 YP_003374325.1 CDS HMPREF0424_1126 NC_013721.1 1298194 1298616 D hypothetical protein 1298194..1298616 Gardnerella vaginalis 409-05 8708831 YP_003374326.1 CDS HMPREF0424_1127 NC_013721.1 1298997 1300820 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase complement(1298997..1300820) Gardnerella vaginalis 409-05 8709979 YP_003374327.1 CDS HMPREF0424_1128 NC_013721.1 1300883 1301026 R identified by glimmer; putative; hypothetical protein complement(1300883..1301026) Gardnerella vaginalis 409-05 8709237 YP_003374328.1 CDS HMPREF0424_1129 NC_013721.1 1301115 1302791 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR03719; ABC transporter ATP-binding protein complement(1301115..1302791) Gardnerella vaginalis 409-05 8709432 YP_003374329.1 CDS HMPREF0424_1130 NC_013721.1 1302930 1303331 R hypothetical protein complement(1302930..1303331) Gardnerella vaginalis 409-05 8709786 YP_003374330.1 CDS HMPREF0424_1131 NC_013721.1 1303430 1304665 R identified by glimmer; putative; hypothetical protein complement(1303430..1304665) Gardnerella vaginalis 409-05 8708927 YP_003374331.1 CDS hflB NC_013721.1 1304937 1307246 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metallopeptidase HflB complement(1304937..1307246) Gardnerella vaginalis 409-05 8709955 YP_003374332.1 CDS hpt NC_013721.1 1307308 1307868 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase complement(1307308..1307868) Gardnerella vaginalis 409-05 8709224 YP_003374333.1 CDS tilS NC_013721.1 1307837 1308955 R identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; tRNA(Ile)-lysidine synthetase complement(1307837..1308955) Gardnerella vaginalis 409-05 8709526 YP_003374334.1 CDS HMPREF0424_1135 NC_013721.1 1309002 1310792 R identified by match to protein family HMM PF02113; putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(1309002..1310792) Gardnerella vaginalis 409-05 8708833 YP_003374335.1 CDS HMPREF0424_1136 NC_013721.1 1310867 1312519 R hypothetical protein complement(1310867..1312519) Gardnerella vaginalis 409-05 8709608 YP_003374336.1 CDS HMPREF0424_1137 NC_013721.1 1312534 1313439 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1312534..1313439) Gardnerella vaginalis 409-05 8709084 YP_003374337.1 CDS HMPREF0424_1138 NC_013721.1 1314130 1315365 R identified by match to protein family HMM PF00535; glycosyltransferase, group 2 family protein complement(1314130..1315365) Gardnerella vaginalis 409-05 8709035 YP_003374338.1 CDS HMPREF0424_1139 NC_013721.1 1315353 1316933 R identified by match to protein family HMM PF01594; hypothetical protein complement(1315353..1316933) Gardnerella vaginalis 409-05 8708975 YP_003374339.1 CDS glnA_2 NC_013721.1 1317205 1318641 D identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 1317205..1318641 Gardnerella vaginalis 409-05 8709373 YP_003374340.1 CDS HMPREF0424_1141 NC_013721.1 1318723 1319364 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1318723..1319364) Gardnerella vaginalis 409-05 8709951 YP_003374341.1 CDS HMPREF0424_1142 NC_013721.1 1319485 1320804 R identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein complement(1319485..1320804) Gardnerella vaginalis 409-05 8709233 YP_003374342.1 CDS HMPREF0424_1143 NC_013721.1 1320879 1322249 R identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein complement(1320879..1322249) Gardnerella vaginalis 409-05 8710008 YP_003374343.1 CDS HMPREF0424_1144 NC_013721.1 1322861 1323268 R identified by glimmer; putative; hypothetical protein complement(1322861..1323268) Gardnerella vaginalis 409-05 8708751 YP_003374344.1 CDS HMPREF0424_1145 NC_013721.1 1323298 1323558 R identified by glimmer; putative; hypothetical protein complement(1323298..1323558) Gardnerella vaginalis 409-05 8709772 YP_003374345.1 CDS HMPREF0424_1146 NC_013721.1 1323742 1324719 R identified by glimmer; putative; hypothetical protein complement(1323742..1324719) Gardnerella vaginalis 409-05 8709326 YP_003374346.1 CDS def_2 NC_013721.1 1324850 1325503 R identified by match to protein family HMM PF01327; peptide deformylase complement(1324850..1325503) Gardnerella vaginalis 409-05 8708976 YP_003374347.1 CDS glmM NC_013721.1 1325681 1327093 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455; phosphoglucosamine mutase complement(1325681..1327093) Gardnerella vaginalis 409-05 8709868 YP_003374348.1 CDS pepN NC_013721.1 1327435 1330050 R identified by match to protein family HMM PF01433; match to protein family HMM TIGR02412; membrane alanyl aminopeptidase complement(1327435..1330050) Gardnerella vaginalis 409-05 8709361 YP_003374349.1 CDS HMPREF0424_1150 NC_013721.1 1330147 1332174 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; hypothetical protein complement(1330147..1332174) Gardnerella vaginalis 409-05 8709809 YP_003374350.1 CDS HMPREF0424_1151 NC_013721.1 1332329 1333723 R identified by match to protein family HMM PF07690; transporter, major facilitator family protein complement(1332329..1333723) Gardnerella vaginalis 409-05 8709570 YP_003374351.1 CDS HMPREF0424_1152 NC_013721.1 1333785 1334471 R identified by match to protein family HMM PF00583; acetyltransferase, GNAT family complement(1333785..1334471) Gardnerella vaginalis 409-05 8709644 YP_003374352.1 CDS HMPREF0424_1153 NC_013721.1 1334653 1338846 R identified by match to protein family HMM PF00580; UvrD/REP helicase complement(1334653..1338846) Gardnerella vaginalis 409-05 8708956 YP_003374353.1 CDS HMPREF0424_1154 NC_013721.1 1338849 1343435 R hypothetical protein complement(1338849..1343435) Gardnerella vaginalis 409-05 8708778 YP_003374354.1 CDS HMPREF0424_1155 NC_013721.1 1343479 1344276 R hypothetical protein complement(1343479..1344276) Gardnerella vaginalis 409-05 8709699 YP_003374355.1 CDS HMPREF0424_1156 NC_013721.1 1344309 1344458 R identified by glimmer; putative; hypothetical protein complement(1344309..1344458) Gardnerella vaginalis 409-05 8710025 YP_003374356.1 CDS thiE NC_013721.1 1344672 1346249 D identified by match to protein family HMM PF02110; match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate diphosphorylase 1344672..1346249 Gardnerella vaginalis 409-05 8709453 YP_003374357.1 CDS thiD NC_013721.1 1346344 1347264 R identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase complement(1346344..1347264) Gardnerella vaginalis 409-05 8708840 YP_003374358.1 CDS HMPREF0424_1160 NC_013721.1 1347752 1357366 R identified by glimmer; putative; hypothetical protein complement(1347752..1357366) Gardnerella vaginalis 409-05 8709422 YP_003374359.1 CDS HMPREF0424_1161 NC_013721.1 1357478 1358611 R identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein complement(1357478..1358611) Gardnerella vaginalis 409-05 8708745 YP_003374360.1 CDS HMPREF0424_1162 NC_013721.1 1358544 1358684 D identified by glimmer; putative; hypothetical protein 1358544..1358684 Gardnerella vaginalis 409-05 8709309 YP_003374361.1 CDS HMPREF0424_1163 NC_013721.1 1358727 1358849 R identified by glimmer; putative; hypothetical protein complement(1358727..1358849) Gardnerella vaginalis 409-05 8709871 YP_003374362.1 CDS HMPREF0424_1164 NC_013721.1 1359291 1361084 R identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain protein complement(1359291..1361084) Gardnerella vaginalis 409-05 8709129 YP_003374363.1 CDS HMPREF0424_1165 NC_013721.1 1361793 1362077 R identified by match to protein family HMM PF01381; XRE family transcriptional regulator complement(1361793..1362077) Gardnerella vaginalis 409-05 8708923 YP_003374364.1 CDS HMPREF0424_1166 NC_013721.1 1362070 1362189 R identified by glimmer; putative; hypothetical protein complement(1362070..1362189) Gardnerella vaginalis 409-05 8709860 YP_003374365.1 CDS HMPREF0424_1167 NC_013721.1 1362858 1363934 R hypothetical protein complement(1362858..1363934) Gardnerella vaginalis 409-05 8709493 YP_003374366.1 CDS rpoC NC_013721.1 1364510 1368529 R identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase, beta' subunit complement(1364510..1368529) Gardnerella vaginalis 409-05 8709391 YP_003374367.1 CDS rpoB NC_013721.1 1368600 1372166 R identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013; DNA-directed RNA polymerase, beta subunit complement(1368600..1372166) Gardnerella vaginalis 409-05 8709036 YP_003374368.1 CDS HMPREF0424_1170 NC_013721.1 1373042 1373731 D identified by match to protein family HMM PF00588; putative RNA methyltransferase, TrmH family, group 2 1373042..1373731 Gardnerella vaginalis 409-05 8709092 YP_003374369.1 CDS HMPREF0424_1171 NC_013721.1 1373765 1374760 D identified by match to protein family HMM PF00633; match to protein family HMM PF00730; putative A/G-specific adenine glycosylase 1373765..1374760 Gardnerella vaginalis 409-05 8709259 YP_003374370.1 CDS HMPREF0424_1172 NC_013721.1 1374890 1375684 D hypothetical protein 1374890..1375684 Gardnerella vaginalis 409-05 8709974 YP_003374371.1 CDS HMPREF0424_1173 NC_013721.1 1375944 1377308 R identified by match to protein family HMM PF05167; hypothetical protein complement(1375944..1377308) Gardnerella vaginalis 409-05 8708997 YP_003374372.1 CDS HMPREF0424_1174 NC_013721.1 1377347 1377685 R identified by match to protein family HMM PF01842; ACT domain protein complement(1377347..1377685) Gardnerella vaginalis 409-05 8709946 YP_003374373.1 CDS prs_2 NC_013721.1 1377789 1378802 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate diphosphokinase complement(1377789..1378802) Gardnerella vaginalis 409-05 8709195 YP_003374374.1 CDS HMPREF0424_1176 NC_013721.1 1378920 1379996 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; hypothetical protein complement(1378920..1379996) Gardnerella vaginalis 409-05 8709639 YP_003374375.1 CDS rfbB NC_013721.1 1380245 1381336 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 1380245..1381336 Gardnerella vaginalis 409-05 8708807 YP_003374376.1 CDS glf NC_013721.1 1381798 1383039 R identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase complement(1381798..1383039) Gardnerella vaginalis 409-05 8710043 YP_003374377.1 CDS HMPREF0424_1180 NC_013721.1 1383146 1384114 R identified by match to protein family HMM PF00535; glycosyltransferase, group 2 family protein complement(1383146..1384114) Gardnerella vaginalis 409-05 8709720 YP_003374378.1 CDS HMPREF0424_1181 NC_013721.1 1384114 1385853 R identified by match to protein family HMM PF00534; glycosyltransferase, group 1 family protein complement(1384114..1385853) Gardnerella vaginalis 409-05 8709023 YP_003374379.1 CDS HMPREF0424_1182 NC_013721.1 1385911 1387167 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1385911..1387167) Gardnerella vaginalis 409-05 8708941 YP_003374380.1 CDS HMPREF0424_1183 NC_013721.1 1387167 1388012 R identified by match to protein family HMM PF01061; ABC transporter complement(1387167..1388012) Gardnerella vaginalis 409-05 8708898 YP_003374381.1 CDS HMPREF0424_1184 NC_013721.1 1388036 1389286 R hypothetical protein complement(1388036..1389286) Gardnerella vaginalis 409-05 8709610 YP_003374382.1 CDS HMPREF0424_1185 NC_013721.1 1389369 1391678 R hypothetical protein complement(1389369..1391678) Gardnerella vaginalis 409-05 8709253 YP_003374383.1 CDS HMPREF0424_1186 NC_013721.1 1391757 1392911 R identified by match to protein family HMM PF04991; LICD Protein Family complement(1391757..1392911) Gardnerella vaginalis 409-05 8709426 YP_003374384.1 CDS HMPREF0424_1187 NC_013721.1 1393012 1393950 R hypothetical protein complement(1393012..1393950) Gardnerella vaginalis 409-05 8709784 YP_003374385.1 CDS HMPREF0424_1188 NC_013721.1 1393954 1395813 R identified by match to protein family HMM PF01633; match to protein family HMM PF01636; phosphotransferase enzyme family protein complement(1393954..1395813) Gardnerella vaginalis 409-05 8709295 YP_003374386.1 CDS HMPREF0424_1189 NC_013721.1 1396220 1397152 D identified by match to protein family HMM PF00535; glycosyltransferase, group 2 family protein 1396220..1397152 Gardnerella vaginalis 409-05 8709033 YP_003374387.1 CDS HMPREF0424_1191 NC_013721.1 1397246 1399342 D hypothetical protein 1397246..1399342 Gardnerella vaginalis 409-05 8709102 YP_003374388.1 CDS HMPREF0424_1190 NC_013721.1 1399328 1401316 R identified by match to protein family HMM PF01183; glycosyl hydrolase family 25 complement(1399328..1401316) Gardnerella vaginalis 409-05 8708782 YP_003374389.1 CDS HMPREF0424_1194 NC_013721.1 1401679 1402161 R identified by match to protein family HMM PF01648; match to protein family HMM TIGR00556; phosphopantethiene--protein transferase domain protein complement(1401679..1402161) Gardnerella vaginalis 409-05 8710070 YP_003374390.1 CDS HMPREF0424_1195 NC_013721.1 1402254 1402373 R identified by glimmer; putative; hypothetical protein complement(1402254..1402373) Gardnerella vaginalis 409-05 8709521 YP_003374391.1 CDS HMPREF0424_1196 NC_013721.1 1402734 1412255 D identified by match to protein family HMM PF08428; match to protein family HMM TIGR01167; match to protein family HMM TIGR02331; LPXTG-motif cell wall anchor domain protein 1402734..1412255 Gardnerella vaginalis 409-05 8708884 YP_003374392.1 CDS maoC NC_013721.1 1412776 1422354 R identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801; match to protein family HMM PF08354; MaoC-like protein complement(1412776..1422354) Gardnerella vaginalis 409-05 8709759 YP_003374393.1 CDS HMPREF0424_1198 NC_013721.1 1422482 1424128 R identified by match to protein family HMM PF01039; carboxyl transferase domain protein complement(1422482..1424128) Gardnerella vaginalis 409-05 8709366 YP_003374394.1 CDS HMPREF0424_1199 NC_013721.1 1424125 1426038 R identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; carbamoyl-phosphate synthase L chain, ATP binding domain protein complement(1424125..1426038) Gardnerella vaginalis 409-05 8709227 YP_003374395.1 CDS HMPREF0424_1200 NC_013721.1 1426244 1426894 D identified by match to protein family HMM PF02632; BioY family protein 1426244..1426894 Gardnerella vaginalis 409-05 8709729 YP_003374396.1 CDS HMPREF0424_1201 NC_013721.1 1427221 1428123 R identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin-(acetyl-CoA-carboxylase) ligase complement(1427221..1428123) Gardnerella vaginalis 409-05 8709419 YP_003374397.1 CDS HMPREF0424_1202 NC_013721.1 1428226 1430256 D hypothetical protein 1428226..1430256 Gardnerella vaginalis 409-05 8709840 YP_003374398.1 CDS HMPREF0424_1203 NC_013721.1 1430272 1431633 D hypothetical protein 1430272..1431633 Gardnerella vaginalis 409-05 8709294 YP_003374399.1 CDS HMPREF0424_1204 NC_013721.1 1431826 1432287 R hypothetical protein complement(1431826..1432287) Gardnerella vaginalis 409-05 8709243 YP_003374400.1 CDS HMPREF0424_1206 NC_013721.1 1432875 1433480 D identified by glimmer; putative; hypothetical protein 1432875..1433480 Gardnerella vaginalis 409-05 8708820 YP_003374401.1 CDS HMPREF0424_1207 NC_013721.1 1433511 1434452 R hypothetical protein complement(1433511..1434452) Gardnerella vaginalis 409-05 8709516 YP_003374402.1 CDS HMPREF0424_1208 NC_013721.1 1434854 1435420 R identified by glimmer; putative; hypothetical protein complement(1434854..1435420) Gardnerella vaginalis 409-05 8709695 YP_003374403.1 CDS rplA NC_013721.1 1436279 1436974 R identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; 50S ribosomal protein L1 complement(1436279..1436974) Gardnerella vaginalis 409-05 8709767 YP_003864089.1 CDS HMPREF0424_1209a NC_013721.1 1436989 1437420 R 50S ribosomal protein L11 complement(1436989..1437420) Gardnerella vaginalis 409-05 9715067 YP_003374404.1 CDS HMPREF0424_1210 NC_013721.1 1437836 1437964 R hypothetical protein complement(1437836..1437964) Gardnerella vaginalis 409-05 8709312 YP_003374405.1 CDS HMPREF0424_1211 NC_013721.1 1438147 1438608 R similar to Plasmodium falciparum CPW-WPC domain protein; CPW-WPC domain protein complement(1438147..1438608) Gardnerella vaginalis 409-05 8709986 YP_003374406.1 CDS HMPREF0424_1212 NC_013721.1 1438703 1439722 R hypothetical protein complement(1438703..1439722) Gardnerella vaginalis 409-05 8708970 YP_003374407.1 CDS HMPREF0424_1213 NC_013721.1 1440069 1441436 R hypothetical protein complement(1440069..1441436) Gardnerella vaginalis 409-05 8709683 YP_003374408.1 CDS HMPREF0424_1214 NC_013721.1 1441623 1442642 R identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein complement(1441623..1442642) Gardnerella vaginalis 409-05 8708978 YP_003374409.1 CDS HMPREF0424_1215 NC_013721.1 1442795 1444636 R identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain protein complement(1442795..1444636) Gardnerella vaginalis 409-05 8709671 YP_003374410.1 CDS HMPREF0424_1216 NC_013721.1 1444879 1447182 R identified by glimmer; putative; hypothetical protein complement(1444879..1447182) Gardnerella vaginalis 409-05 8709766 YP_003374411.1 CDS nusG NC_013721.1 1447564 1448460 R identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG complement(1447564..1448460) Gardnerella vaginalis 409-05 8709250 YP_003374412.1 CDS secE NC_013721.1 1448502 1448729 R identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; preprotein translocase, SecE subunit complement(1448502..1448729) Gardnerella vaginalis 409-05 8709402 YP_003374413.1 CDS HMPREF0424_1220 NC_013721.1 1449000 1450238 R identified by match to protein family HMM PF00155; putative aspartate transaminase complement(1449000..1450238) Gardnerella vaginalis 409-05 8710074 YP_003374414.1 CDS proB NC_013721.1 1450341 1451486 R identified by match to protein family HMM PF00696; match to protein family HMM PF01472; match to protein family HMM TIGR01027; glutamate 5-kinase complement(1450341..1451486) Gardnerella vaginalis 409-05 8709582 YP_003374415.1 CDS cgtA NC_013721.1 1451512 1453194 R identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM PF09269; match to protein family HMM TIGR02729; match to protein family HMM TIGR03595; Obg family GTPase CgtA complement(1451512..1453194) Gardnerella vaginalis 409-05 8708864 YP_003374416.1 CDS rpmA NC_013721.1 1453330 1453581 R identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; ribosomal protein L27 complement(1453330..1453581) Gardnerella vaginalis 409-05 8709758 YP_003374417.1 CDS HMPREF0424_1224 NC_013721.1 1454110 1457391 R identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; S1 RNA binding domain protein complement(1454110..1457391) Gardnerella vaginalis 409-05 8709213 YP_003374418.1 CDS HMPREF0424_1225 NC_013721.1 1457785 1458726 D identified by match to protein family HMM PF03547; transporter, auxin efflux carrier (AEC) family protein 1457785..1458726 Gardnerella vaginalis 409-05 8709565 YP_003374419.1 CDS HMPREF0424_1226 NC_013721.1 1458774 1459061 R putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein complement(1458774..1459061) Gardnerella vaginalis 409-05 8709180 YP_003374420.1 CDS HMPREF0424_1227 NC_013721.1 1459074 1459241 R identified by glimmer; putative; hypothetical protein complement(1459074..1459241) Gardnerella vaginalis 409-05 8708770 YP_003374421.1 CDS HMPREF0424_1228 NC_013721.1 1459698 1460558 R hypothetical protein complement(1459698..1460558) Gardnerella vaginalis 409-05 8709345 YP_003374422.1 CDS maf NC_013721.1 1460968 1462395 R identified by match to protein family HMM PF00293; match to protein family HMM PF02545; match to protein family HMM TIGR00172; septum formation protein Maf complement(1460968..1462395) Gardnerella vaginalis 409-05 8708988 YP_003374423.1 CDS thrB NC_013721.1 1462429 1463496 R identified by match to protein family HMM PF00288; match to protein family HMM TIGR00191; homoserine kinase complement(1462429..1463496) Gardnerella vaginalis 409-05 8709499 YP_003374424.1 CDS HMPREF0424_1231 NC_013721.1 1463516 1464886 R identified by match to protein family HMM PF00742; match to protein family HMM PF03447; homoserine dehydrogenase complement(1463516..1464886) Gardnerella vaginalis 409-05 8708802 YP_003374425.1 CDS HMPREF0424_1232 NC_013721.1 1464952 1465953 R identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein complement(1464952..1465953) Gardnerella vaginalis 409-05 8709581 YP_003374426.1 CDS HMPREF0424_1233 NC_013721.1 1466029 1467171 R identified by match to protein family HMM PF01820; match to protein family HMM PF02222; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-ala D-ala ligase N-terminal domain protein complement(1466029..1467171) Gardnerella vaginalis 409-05 8709920 YP_003374427.1 CDS HMPREF0424_1234 NC_013721.1 1467243 1468238 R identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF02737; match to protein family HMM PF07479; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein complement(1467243..1468238) Gardnerella vaginalis 409-05 8709359 YP_003374428.1 CDS HMPREF0424_1235 NC_013721.1 1468380 1469264 R identified by match to protein family HMM PF01553; acyltransferase complement(1468380..1469264) Gardnerella vaginalis 409-05 8709916 YP_003374429.1 CDS HMPREF0424_1236 NC_013721.1 1469284 1470147 R identified by match to protein family HMM PF00950; match to protein family HMM TIGR03770; anchored repeat-type ABC transporter, permease subunit complement(1469284..1470147) Gardnerella vaginalis 409-05 8709364 YP_003374430.1 CDS HMPREF0424_1237 NC_013721.1 1470147 1470935 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR03771; anchored repeat-type ABC transporter, ATP-binding subunit complement(1470147..1470935) Gardnerella vaginalis 409-05 8709757 YP_003374431.1 CDS HMPREF0424_1238 NC_013721.1 1470956 1472671 R identified by match to protein family HMM PF01297; match to protein family HMM TIGR03769; match to protein family HMM TIGR03772; anchored repeat ABC transporter, substrate-binding protein complement(1470956..1472671) Gardnerella vaginalis 409-05 8709697 YP_003374432.1 CDS HMPREF0424_1239 NC_013721.1 1472723 1474897 R identified by match to protein family HMM TIGR03769; putative ABC transporter-associated repeat protein complement(1472723..1474897) Gardnerella vaginalis 409-05 8708995 YP_003374433.1 CDS HMPREF0424_1240 NC_013721.1 1474878 1476077 R identified by match to protein family HMM TIGR03769; surface-anchored protein domain protein complement(1474878..1476077) Gardnerella vaginalis 409-05 8709532 YP_003374434.1 CDS HMPREF0424_1241 NC_013721.1 1476112 1478427 R identified by match to protein family HMM TIGR03769; surface-anchored protein domain protein complement(1476112..1478427) Gardnerella vaginalis 409-05 8708781 YP_003374435.1 CDS HMPREF0424_1242 NC_013721.1 1478656 1479210 R identified by match to protein family HMM PF00857; isochorismatase family protein complement(1478656..1479210) Gardnerella vaginalis 409-05 8709970 YP_003374436.1 CDS HMPREF0424_1246 NC_013721.1 1485518 1486333 R hypothetical protein complement(1485518..1486333) Gardnerella vaginalis 409-05 8710028 YP_003374437.1 CDS HMPREF0424_1247 NC_013721.1 1486357 1488990 R identified by match to protein family HMM PF02705; K+ potassium transporter complement(1486357..1488990) Gardnerella vaginalis 409-05 8709028 YP_003374438.1 CDS HMPREF0424_1248 NC_013721.1 1489155 1490135 R identified by match to protein family HMM PF01026; hydrolase, TatD family complement(1489155..1490135) Gardnerella vaginalis 409-05 8708795 YP_003374439.1 CDS HMPREF0424_1249 NC_013721.1 1490190 1491986 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1490190..1491986) Gardnerella vaginalis 409-05 8709670 YP_003374440.1 CDS HMPREF0424_1250 NC_013721.1 1491989 1493803 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1491989..1493803) Gardnerella vaginalis 409-05 8708977 YP_003374441.1 CDS HMPREF0424_1251 NC_013721.1 1493983 1495725 R identified by match to protein family HMM PF00496; extracellular solute-binding protein complement(1493983..1495725) Gardnerella vaginalis 409-05 8709818 YP_003374442.1 CDS HMPREF0424_1252 NC_013721.1 1496049 1497938 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; putative phosphonate C-P lyase system protein PhnK complement(1496049..1497938) Gardnerella vaginalis 409-05 8709040 YP_003374443.1 CDS HMPREF0424_1253 NC_013721.1 1497960 1498907 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1497960..1498907) Gardnerella vaginalis 409-05 8709808 YP_003374444.1 CDS HMPREF0424_1254 NC_013721.1 1498932 1499915 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1498932..1499915) Gardnerella vaginalis 409-05 8709096 YP_003374445.1 CDS HMPREF0424_1255 NC_013721.1 1500477 1501919 D identified by match to protein family HMM PF03051; peptidase C1-like protein 1500477..1501919 Gardnerella vaginalis 409-05 8709950 YP_003374446.1 CDS metG NC_013721.1 1502264 1504141 R identified by match to protein family HMM PF09334; match to protein family HMM TIGR00398; methionine--tRNA ligase complement(1502264..1504141) Gardnerella vaginalis 409-05 8709544 YP_003374447.1 CDS HMPREF0424_1257 NC_013721.1 1504426 1505052 D hypothetical protein 1504426..1505052 Gardnerella vaginalis 409-05 8709335 YP_003374448.1 CDS HMPREF0424_1258 NC_013721.1 1505043 1505306 D hypothetical protein 1505043..1505306 Gardnerella vaginalis 409-05 8709664 YP_003374449.1 CDS yraL NC_013721.1 1505338 1506240 R identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; S-adenosylmethionine-dependent methyltransferase, YraL family complement(1505338..1506240) Gardnerella vaginalis 409-05 8708986 YP_003374450.1 CDS HMPREF0424_1260 NC_013721.1 1506370 1507212 D lipase/esterase family protein 1506370..1507212 Gardnerella vaginalis 409-05 8709755 YP_003374451.1 CDS fhs NC_013721.1 1507387 1508904 R identified by match to protein family HMM PF01268; formate--tetrahydrofolate ligase complement(1507387..1508904) Gardnerella vaginalis 409-05 8709681 YP_003374452.1 CDS HMPREF0424_1262 NC_013721.1 1509133 1510740 R identified by match to protein family HMM PF03577; peptidase family C69 complement(1509133..1510740) Gardnerella vaginalis 409-05 8709889 YP_003374453.1 CDS HMPREF0424_1263 NC_013721.1 1510852 1511403 R identified by match to protein family HMM TIGR00481; Raf-like protein complement(1510852..1511403) Gardnerella vaginalis 409-05 8709215 YP_003374454.1 CDS HMPREF0424_1264 NC_013721.1 1511626 1513158 R identified by match to protein family HMM PF04215; PTS system, IIBC component family protein complement(1511626..1513158) Gardnerella vaginalis 409-05 8709354 YP_003374455.1 CDS HMPREF0424_1265 NC_013721.1 1513178 1513291 R putative lipoprotein complement(1513178..1513291) Gardnerella vaginalis 409-05 8709810 YP_003374456.1 CDS HMPREF0424_1266 NC_013721.1 1513275 1513544 R identified by match to protein family HMM PF02302; PTS system, Lactose/Cellobiose specific IIB subunit complement(1513275..1513544) Gardnerella vaginalis 409-05 8708889 YP_003374457.1 CDS HMPREF0424_1267 NC_013721.1 1513608 1514057 R identified by match to protein family HMM PF00359; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 complement(1513608..1514057) Gardnerella vaginalis 409-05 8709917 YP_003374458.1 CDS ptsP NC_013721.1 1514162 1515820 R identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase complement(1514162..1515820) Gardnerella vaginalis 409-05 8709398 YP_003374459.1 CDS HMPREF0424_1269 NC_013721.1 1516094 1516360 D identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier, HPr family 1516094..1516360 Gardnerella vaginalis 409-05 8708865 YP_003374460.1 CDS HMPREF0424_1270 NC_013721.1 1516460 1517539 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; transcriptional regulator, LacI family 1516460..1517539 Gardnerella vaginalis 409-05 8709548 YP_003374461.1 CDS HMPREF0424_1271 NC_013721.1 1517552 1518730 R DNA polymerase III, delta' subunit family protein complement(1517552..1518730) Gardnerella vaginalis 409-05 8708929 YP_003374462.1 CDS tmk NC_013721.1 1518785 1519489 R identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041; dTMP kinase complement(1518785..1519489) Gardnerella vaginalis 409-05 8708979 YP_003374463.1 CDS topA NC_013721.1 1519537 1522383 R identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01051; DNA topoisomerase complement(1519537..1522383) Gardnerella vaginalis 409-05 8709654 YP_003374464.1 CDS HMPREF0424_1274 NC_013721.1 1522515 1523822 R identified by match to protein family HMM PF01569; PAP2 family protein complement(1522515..1523822) Gardnerella vaginalis 409-05 8709329 YP_003374465.1 CDS HMPREF0424_1276 NC_013721.1 1524006 1525148 R identified by match to protein family HMM PF01658; match to protein family HMM PF07994; putative inositol 1-phosphate synthase complement(1524006..1525148) Gardnerella vaginalis 409-05 8710026 YP_003374466.1 CDS HMPREF0424_1277 NC_013721.1 1525321 1527645 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; transglycosylase 1525321..1527645 Gardnerella vaginalis 409-05 8709201 YP_003374467.1 CDS HMPREF0424_1278 NC_013721.1 1527740 1528483 R identified by match to protein family HMM PF00702; HAD hydrolase, family IA, variant 3 complement(1527740..1528483) Gardnerella vaginalis 409-05 8709895 YP_003374468.1 CDS HMPREF0424_1279 NC_013721.1 1528623 1529219 R identified by match to protein family HMM PF00376; transcriptional regulator, MerR family complement(1528623..1529219) Gardnerella vaginalis 409-05 8708939 YP_003374469.1 CDS dnaJ NC_013721.1 1529307 1530368 R identified by match to protein family HMM PF00226; match to protein family HMM PF01556; DnaJ domain protein complement(1529307..1530368) Gardnerella vaginalis 409-05 8709663 YP_003374470.1 CDS grpE NC_013721.1 1530493 1531191 R identified by match to protein family HMM PF01025; co-chaperone GrpE complement(1530493..1531191) Gardnerella vaginalis 409-05 8708760 YP_003374471.1 CDS dnaK NC_013721.1 1531191 1533074 R identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK complement(1531191..1533074) Gardnerella vaginalis 409-05 8709477 YP_003374472.1 CDS HMPREF0424_1283 NC_013721.1 1533352 1534083 R identified by match to protein family HMM PF00899; match to protein family HMM PF05237; thiamine biosynthesis protein ThiF family protein complement(1533352..1534083) Gardnerella vaginalis 409-05 8709981 YP_003374473.1 CDS thiG_2 NC_013721.1 1534119 1534931 R identified by match to protein family HMM PF05690; thiazole biosynthesis protein ThiG complement(1534119..1534931) Gardnerella vaginalis 409-05 8709412 YP_003374474.1 CDS thiS_2 NC_013721.1 1534983 1535189 R identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS complement(1534983..1535189) Gardnerella vaginalis 409-05 8709839 YP_003374475.1 CDS thiO NC_013721.1 1535313 1536383 R identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352; glycine oxidase ThiO complement(1535313..1536383) Gardnerella vaginalis 409-05 8709585 YP_003374476.1 CDS HMPREF0424_1288 NC_013721.1 1536873 1539620 R identified by match to protein family HMM PF01055; glycosyl hydrolase, family 31 complement(1536873..1539620) Gardnerella vaginalis 409-05 8708772 YP_003374477.1 CDS HMPREF0424_1289 NC_013721.1 1539731 1540642 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1539731..1540642) Gardnerella vaginalis 409-05 8709476 YP_003374478.1 CDS HMPREF0424_1290 NC_013721.1 1540639 1541574 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1540639..1541574) Gardnerella vaginalis 409-05 8709240 YP_003374479.1 CDS HMPREF0424_1291 NC_013721.1 1541622 1543007 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1541622..1543007) Gardnerella vaginalis 409-05 8709886 YP_003374480.1 CDS HMPREF0424_1292 NC_013721.1 1543292 1544317 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; transcriptional regulator, LacI family 1543292..1544317 Gardnerella vaginalis 409-05 8709340 YP_003374481.1 CDS HMPREF0424_1293 NC_013721.1 1544462 1545298 R hypothetical protein complement(1544462..1545298) Gardnerella vaginalis 409-05 8709825 YP_003374482.1 CDS HMPREF0424_1294 NC_013721.1 1545376 1547076 R identified by match to protein family HMM PF00128; alpha amylase, catalytic domain protein complement(1545376..1547076) Gardnerella vaginalis 409-05 8708962 YP_003374483.1 CDS HMPREF0424_1295 NC_013721.1 1547335 1548564 D identified by match to protein family HMM PF01547; extracellular solute-binding protein 1547335..1548564 Gardnerella vaginalis 409-05 8709678 YP_003374484.1 CDS HMPREF0424_1296 NC_013721.1 1548724 1550130 D identified by match to protein family HMM PF00528; ABC transporter permease 1548724..1550130 Gardnerella vaginalis 409-05 8708784 YP_003374485.1 CDS HMPREF0424_1297 NC_013721.1 1550127 1551050 D identified by match to protein family HMM PF00528; ABC transporter permease 1550127..1551050 Gardnerella vaginalis 409-05 8709975 YP_003374486.1 CDS pulA_2 NC_013721.1 1551362 1553371 D identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; pullulanase, type I 1551362..1553371 Gardnerella vaginalis 409-05 8709264 YP_003374487.1 CDS malQ_2 NC_013721.1 1553648 1555897 D identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 1553648..1555897 Gardnerella vaginalis 409-05 8709746 YP_003374488.1 CDS HMPREF0424_1300 NC_013721.1 1556046 1556177 R hypothetical protein complement(1556046..1556177) Gardnerella vaginalis 409-05 8709658 YP_003374489.1 CDS HMPREF0424_1301 NC_013721.1 1556366 1556974 R hypothetical protein complement(1556366..1556974) Gardnerella vaginalis 409-05 8708987 YP_003374490.1 CDS HMPREF0424_1302 NC_013721.1 1557162 1557995 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1557162..1557995) Gardnerella vaginalis 409-05 8709552 YP_003374491.1 CDS HMPREF0424_1303 NC_013721.1 1557992 1558843 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1557992..1558843) Gardnerella vaginalis 409-05 8708863 YP_003374492.1 CDS HMPREF0424_1304 NC_013721.1 1559146 1560159 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; periplasmic binding protein and sugar binding domain of the LacI family protein 1559146..1560159 Gardnerella vaginalis 409-05 8709405 YP_003374493.1 CDS HMPREF0424_1305 NC_013721.1 1560306 1561649 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1560306..1561649) Gardnerella vaginalis 409-05 8709298 YP_003374494.1 CDS HMPREF0424_1306 NC_013721.1 1561922 1563337 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1561922..1563337) Gardnerella vaginalis 409-05 8709046 YP_003374495.1 CDS HMPREF0424_1307 NC_013721.1 1563524 1564234 R identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein complement(1563524..1564234) Gardnerella vaginalis 409-05 8708920 YP_003374496.1 CDS HMPREF0424_1308 NC_013721.1 1564404 1564859 D hypothetical protein 1564404..1564859 Gardnerella vaginalis 409-05 8709669 YP_003374497.1 CDS HMPREF0424_1309 NC_013721.1 1564810 1565709 D identified by match to protein family HMM PF00881; nitroreductase family protein 1564810..1565709 Gardnerella vaginalis 409-05 8709923 YP_003374498.1 CDS HMPREF0424_1310 NC_013721.1 1565745 1565930 R identified by glimmer; putative; hypothetical protein complement(1565745..1565930) Gardnerella vaginalis 409-05 8709525 YP_003374499.1 CDS HMPREF0424_1311 NC_013721.1 1566274 1567800 D identified by match to protein family HMM PF00155; match to protein family HMM PF01212; match to protein family HMM PF01381; aminotransferase AlaT 1566274..1567800 Gardnerella vaginalis 409-05 8709798 YP_003374500.1 CDS HMPREF0424_1312 NC_013721.1 1567917 1568978 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; periplasmic binding protein and sugar binding domain of the LacI family protein complement(1567917..1568978) Gardnerella vaginalis 409-05 8709116 YP_003374501.1 CDS HMPREF0424_1313 NC_013721.1 1569008 1570387 R identified by match to protein family HMM PF00128; alpha amylase, catalytic domain protein complement(1569008..1570387) Gardnerella vaginalis 409-05 8709777 YP_003374502.1 CDS HMPREF0424_1314 NC_013721.1 1570420 1571241 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1570420..1571241) Gardnerella vaginalis 409-05 8709160 YP_003374503.1 CDS HMPREF0424_1315 NC_013721.1 1571241 1572146 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1571241..1572146) Gardnerella vaginalis 409-05 8708990 YP_003374504.1 CDS HMPREF0424_1316 NC_013721.1 1572231 1573502 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1572231..1573502) Gardnerella vaginalis 409-05 8709118 YP_003374505.1 CDS HMPREF0424_1317 NC_013721.1 1573710 1575572 R identified by match to protein family HMM PF00128; alpha amylase, catalytic domain protein complement(1573710..1575572) Gardnerella vaginalis 409-05 8709041 YP_003374506.1 CDS HMPREF0424_1318 NC_013721.1 1575876 1577138 D identified by match to protein family HMM PF07690; transporter, major facilitator family protein 1575876..1577138 Gardnerella vaginalis 409-05 8709256 YP_003374507.1 CDS HMPREF0424_1319 NC_013721.1 1577183 1577707 R identified by glimmer; putative; hypothetical protein complement(1577183..1577707) Gardnerella vaginalis 409-05 8709836 YP_003374508.1 CDS HMPREF0424_1322 NC_013721.1 1579637 1580539 R putative lipoprotein complement(1579637..1580539) Gardnerella vaginalis 409-05 8709305 YP_003374509.1 CDS HMPREF0424_1323 NC_013721.1 1580557 1580949 R identified by glimmer; putative; hypothetical protein complement(1580557..1580949) Gardnerella vaginalis 409-05 8710013 YP_003374510.1 CDS HMPREF0424_1324 NC_013721.1 1581370 1582545 R identified by glimmer; putative; hypothetical protein complement(1581370..1582545) Gardnerella vaginalis 409-05 8709983 YP_003374511.1 CDS HMPREF0424_1325 NC_013721.1 1582560 1583210 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; transcriptional regulator, LuxR family complement(1582560..1583210) Gardnerella vaginalis 409-05 8709531 YP_003374512.1 CDS HMPREF0424_1326 NC_013721.1 1583405 1584742 R hypothetical protein complement(1583405..1584742) Gardnerella vaginalis 409-05 8709168 YP_003374513.1 CDS HMPREF0424_1327 NC_013721.1 1584891 1585703 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(1584891..1585703) Gardnerella vaginalis 409-05 8709059 YP_003374514.1 CDS HMPREF0424_1331 NC_013721.1 1591863 1592636 D identified by match to protein family HMM PF02146; transcriptional regulator, Sir2 family 1591863..1592636 Gardnerella vaginalis 409-05 8710027 YP_003374515.1 CDS HMPREF0424_1332 NC_013721.1 1592662 1594581 R identified by match to protein family HMM PF00128; alpha amylase, catalytic domain protein complement(1592662..1594581) Gardnerella vaginalis 409-05 8709333 YP_003374516.1 CDS HMPREF0424_1333 NC_013721.1 1594795 1595763 R identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase complement(1594795..1595763) Gardnerella vaginalis 409-05 8709404 YP_003374517.1 CDS HMPREF0424_1334 NC_013721.1 1596006 1597067 R identified by match to protein family HMM PF00294; putative ribokinase complement(1596006..1597067) Gardnerella vaginalis 409-05 8709858 YP_003374518.1 CDS HMPREF0424_1335 NC_013721.1 1597099 1597494 R identified by match to protein family HMM PF05025; RbsD/FucU transport family protein complement(1597099..1597494) Gardnerella vaginalis 409-05 8709279 YP_003374519.1 CDS HMPREF0424_1336 NC_013721.1 1597789 1598727 R identified by match to protein family HMM PF00532; periplasmic binding protein and sugar binding domain of the LacI family protein complement(1597789..1598727) Gardnerella vaginalis 409-05 8709024 YP_003374520.1 CDS HMPREF0424_1337 NC_013721.1 1598991 1599992 R identified by match to protein family HMM PF02653; amino acid ABC transporter permease complement(1598991..1599992) Gardnerella vaginalis 409-05 8709418 YP_003374521.1 CDS HMPREF0424_1338 NC_013721.1 1600164 1601657 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1600164..1601657) Gardnerella vaginalis 409-05 8709440 YP_003374522.1 CDS HMPREF0424_1339 NC_013721.1 1601874 1602884 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; transcriptional regulator, LacI family complement(1601874..1602884) Gardnerella vaginalis 409-05 8708907 YP_003374523.1 CDS HMPREF0424_1340 NC_013721.1 1603275 1603736 R identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase zinc-binding region complement(1603275..1603736) Gardnerella vaginalis 409-05 8709267 YP_003374524.1 CDS HMPREF0424_1341 NC_013721.1 1603811 1604650 R identified by match to protein family HMM PF02230; phospholipase/carboxylesterase complement(1603811..1604650) Gardnerella vaginalis 409-05 8709811 YP_003374525.1 CDS tgt NC_013721.1 1604897 1606222 R identified by match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449; tRNA-guanine transglycosylase complement(1604897..1606222) Gardnerella vaginalis 409-05 8710041 YP_003374526.1 CDS HMPREF0424_1344 NC_013721.1 1606408 1608192 D identified by match to protein family HMM PF00089; match to protein family HMM PF00595; trypsin 1606408..1608192 Gardnerella vaginalis 409-05 8709082 YP_003374527.1 CDS HMPREF0424_1345 NC_013721.1 1608328 1610133 R hypothetical protein complement(1608328..1610133) Gardnerella vaginalis 409-05 8709558 YP_003374528.1 CDS HMPREF0424_1346 NC_013721.1 1610264 1611259 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase, TrmH family, group 3 complement(1610264..1611259) Gardnerella vaginalis 409-05 8708846 YP_003374529.1 CDS HMPREF0424_1347 NC_013721.1 1611486 1614476 D identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; putative calcium-translocating P-type ATPase, PMCA-type 1611486..1614476 Gardnerella vaginalis 409-05 8708871 YP_003374530.1 CDS dcd NC_013721.1 1614765 1615346 D identified by match to protein family HMM PF00692; match to protein family HMM TIGR02274; dCTP deaminase 1614765..1615346 Gardnerella vaginalis 409-05 8709401 YP_003374531.1 CDS trpB NC_013721.1 1615922 1617115 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR00263; tryptophan synthase, beta subunit 1615922..1617115 Gardnerella vaginalis 409-05 8708966 YP_003374532.1 CDS HMPREF0424_1350 NC_013721.1 1617276 1617491 R identified by glimmer; putative; hypothetical protein complement(1617276..1617491) Gardnerella vaginalis 409-05 8710005 HMPREF0424_1351 tRNA HMPREF0424_1351 NC_013721.1 8030 8103 R tRNA-Gly complement(8030..8103) Gardnerella vaginalis 409-05 8708776 HMPREF0424_1352 tRNA HMPREF0424_1352 NC_013721.1 14067 14142 R tRNA-Ala complement(14067..14142) Gardnerella vaginalis 409-05 8709288 HMPREF0424_1353 tRNA HMPREF0424_1353 NC_013721.1 14167 14243 R tRNA-Ile complement(14167..14243) Gardnerella vaginalis 409-05 8710056 HMPREF0424_1354 tRNA HMPREF0424_1354 NC_013721.1 76203 76279 R tRNA-Thr complement(76203..76279) Gardnerella vaginalis 409-05 8709715 HMPREF0424_1355 tRNA HMPREF0424_1355 NC_013721.1 83629 83701 R tRNA-Lys complement(83629..83701) Gardnerella vaginalis 409-05 8709874 HMPREF0424_1356 tRNA HMPREF0424_1356 NC_013721.1 162615 162691 R tRNA-Met complement(162615..162691) Gardnerella vaginalis 409-05 8709481 HMPREF0424_1357 tRNA HMPREF0424_1357 NC_013721.1 225644 225719 D tRNA-Glu 225644..225719 Gardnerella vaginalis 409-05 8709781 HMPREF0424_1358 tRNA HMPREF0424_1358 NC_013721.1 225757 225831 D tRNA-Gln 225757..225831 Gardnerella vaginalis 409-05 8710040 HMPREF0424_1359 tRNA HMPREF0424_1359 NC_013721.1 233668 233740 R tRNA-Ala complement(233668..233740) Gardnerella vaginalis 409-05 8709512 HMPREF0424_1360 tRNA HMPREF0424_1360 NC_013721.1 264930 265011 D tRNA-Tyr 264930..265011 Gardnerella vaginalis 409-05 8709025 HMPREF0424_1361 tRNA HMPREF0424_1361 NC_013721.1 265013 265084 D tRNA-Thr 265013..265084 Gardnerella vaginalis 409-05 8710046 HMPREF0424_1362 tRNA HMPREF0424_1362 NC_013721.1 265089 265165 D tRNA-Met 265089..265165 Gardnerella vaginalis 409-05 8710068 HMPREF0424_1363 tRNA HMPREF0424_1363 NC_013721.1 271659 271748 D tRNA-Ser 271659..271748 Gardnerella vaginalis 409-05 8709665 HMPREF0424_1364 tRNA HMPREF0424_1364 NC_013721.1 300790 300875 D tRNA-Ser 300790..300875 Gardnerella vaginalis 409-05 8709905 HMPREF0424_1365 tRNA HMPREF0424_1365 NC_013721.1 368487 368570 R tRNA-Leu complement(368487..368570) Gardnerella vaginalis 409-05 8709560 HMPREF0424_1366 tRNA HMPREF0424_1366 NC_013721.1 368641 368713 R tRNA-Thr complement(368641..368713) Gardnerella vaginalis 409-05 8710061 HMPREF0424_1368 tRNA HMPREF0424_1368 NC_013721.1 386894 386981 D tRNA-Ser 386894..386981 Gardnerella vaginalis 409-05 8709987 HMPREF0424_1369 tRNA HMPREF0424_1369 NC_013721.1 422256 422329 R tRNA-Pro complement(422256..422329) Gardnerella vaginalis 409-05 8709114 HMPREF0424_1371 tRNA HMPREF0424_1371 NC_013721.1 443903 443975 D tRNA-Arg 443903..443975 Gardnerella vaginalis 409-05 8709242 HMPREF0424_1372 tRNA HMPREF0424_1372 NC_013721.1 469288 469364 D tRNA-Lys 469288..469364 Gardnerella vaginalis 409-05 8709618 HMPREF0424_1373 tRNA HMPREF0424_1373 NC_013721.1 471310 471382 D tRNA-Arg 471310..471382 Gardnerella vaginalis 409-05 8708893 HMPREF0424_1374 tRNA HMPREF0424_1374 NC_013721.1 492489 492562 R tRNA-Val complement(492489..492562) Gardnerella vaginalis 409-05 8709415 HMPREF0424_1375 tRNA HMPREF0424_1375 NC_013721.1 503382 503456 D tRNA-Glu 503382..503456 Gardnerella vaginalis 409-05 8709473 HMPREF0424_1376 tRNA HMPREF0424_1376 NC_013721.1 504545 504621 D tRNA-Met 504545..504621 Gardnerella vaginalis 409-05 8708768 HMPREF0424_1377 tRNA HMPREF0424_1377 NC_013721.1 667086 667159 D tRNA-Leu 667086..667159 Gardnerella vaginalis 409-05 8709732 HMPREF0424_1378 tRNA HMPREF0424_1378 NC_013721.1 689664 689737 D tRNA-Pro 689664..689737 Gardnerella vaginalis 409-05 8709304 HMPREF0424_1379 tRNA HMPREF0424_1379 NC_013721.1 707115 707205 R tRNA-Leu complement(707115..707205) Gardnerella vaginalis 409-05 8709636 HMPREF0424_1381 tRNA HMPREF0424_1381 NC_013721.1 752223 752309 D tRNA-Leu 752223..752309 Gardnerella vaginalis 409-05 8709611 HMPREF0424_1383 tRNA HMPREF0424_1383 NC_013721.1 871039 871114 D tRNA-Gly 871039..871114 Gardnerella vaginalis 409-05 8709389 HMPREF0424_1384 tRNA HMPREF0424_1384 NC_013721.1 871140 871213 D tRNA-Cys 871140..871213 Gardnerella vaginalis 409-05 8710048 HMPREF0424_1385 tRNA HMPREF0424_1385 NC_013721.1 871241 871312 D tRNA-Val 871241..871312 Gardnerella vaginalis 409-05 8710065 HMPREF0424_1386 tRNA HMPREF0424_1386 NC_013721.1 871352 871427 D tRNA-Val 871352..871427 Gardnerella vaginalis 409-05 8710037 HMPREF0424_1388 tRNA HMPREF0424_1388 NC_013721.1 878117 878192 D tRNA-Gly 878117..878192 Gardnerella vaginalis 409-05 8708992 HMPREF0424_1390 tRNA HMPREF0424_1390 NC_013721.1 996728 996804 R tRNA-Arg complement(996728..996804) Gardnerella vaginalis 409-05 8709478 HMPREF0424_1392 tRNA HMPREF0424_1392 NC_013721.1 1094679 1094754 D tRNA-Asn 1094679..1094754 Gardnerella vaginalis 409-05 8709717 HMPREF0424_1394 tRNA HMPREF0424_1394 NC_013721.1 1137224 1137299 R tRNA-Ala complement(1137224..1137299) Gardnerella vaginalis 409-05 8709247 HMPREF0424_1395 tRNA HMPREF0424_1395 NC_013721.1 1144840 1144910 R tRNA-Gln complement(1144840..1144910) Gardnerella vaginalis 409-05 8708832 HMPREF0424_1396 tRNA HMPREF0424_1396 NC_013721.1 1164270 1164345 R tRNA-His complement(1164270..1164345) Gardnerella vaginalis 409-05 8708765 HMPREF0424_1397 tRNA HMPREF0424_1397 NC_013721.1 1183488 1183560 R tRNA-Arg complement(1183488..1183560) Gardnerella vaginalis 409-05 8709929 HMPREF0424_1399 tRNA HMPREF0424_1399 NC_013721.1 1289521 1289596 R tRNA-Phe complement(1289521..1289596) Gardnerella vaginalis 409-05 8709188 HMPREF0424_1400 tRNA HMPREF0424_1400 NC_013721.1 1289637 1289713 R tRNA-Asp complement(1289637..1289713) Gardnerella vaginalis 409-05 8710063 HMPREF0424_1402 tRNA HMPREF0424_1402 NC_013721.1 1381435 1381519 R tRNA-Ser complement(1381435..1381519) Gardnerella vaginalis 409-05 8708981 HMPREF0424_1403 tRNA HMPREF0424_1403 NC_013721.1 1401485 1401558 R tRNA-Gly complement(1401485..1401558) Gardnerella vaginalis 409-05 8709599 HMPREF0424_1404 tRNA HMPREF0424_1404 NC_013721.1 1448766 1448841 R tRNA-Trp complement(1448766..1448841) Gardnerella vaginalis 409-05 8709293 HMPREF0424_1413 tRNA HMPREF0424_1413 NC_013721.1 1604736 1604821 R tRNA-Leu complement(1604736..1604821) Gardnerella vaginalis 409-05 8709773 HMPREF0424_1405 rRNA rrfA NC_013721.1 1479774 1479890 R 5S ribosomal RNA complement(1479774..1479890) Gardnerella vaginalis 409-05 8709321 HMPREF0424_1406 rRNA rrlA NC_013721.1 1480074 1483119 R 23S ribosomal RNA complement(1480074..1483119) Gardnerella vaginalis 409-05 8710029 HMPREF0424_1407 rRNA rrsA NC_013721.1 1483562 1485035 R 16S ribosomal RNA complement(1483562..1485035) Gardnerella vaginalis 409-05 8710032 HMPREF0424_1410 rRNA rrfB NC_013721.1 1585833 1585949 R 5S ribosomal RNA complement(1585833..1585949) Gardnerella vaginalis 409-05 8708919 HMPREF0424_1411 rRNA rrlB NC_013721.1 1586133 1589178 R 23S ribosomal RNA complement(1586133..1589178) Gardnerella vaginalis 409-05 8710031 HMPREF0424_1412 rRNA rrsB NC_013721.1 1589621 1591094 R 16S ribosomal RNA complement(1589621..1591094) Gardnerella vaginalis 409-05 8710030