-- dump date 20120504_145101 -- class Genbank::CDS -- table cds_note -- id note YP_003669652.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: gka:GK0001 chromosomal replication initiation protein; SMART: replication initiation factor DnaA; ATPase AAA YP_003669653.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III subunit beta; KEGG: gka:GK0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_003669654.1 TIGRFAM: S4 domain protein YaaA; KEGG: gyc:GYMC61_0003 S4 domain protein YaaA YP_003669655.1 KEGG: gyc:GYMC61_0004 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_003669656.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase subunit beta; KEGG: gyc:GYMC61_0005 DNA gyrase subunit beta; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein YP_003669657.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase subunit alpha; KEGG: gyc:GYMC61_0006 DNA gyrase subunit alpha; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003669658.1 KEGG: gyc:GYMC61_0007 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003669659.1 KEGG: gyc:GYMC61_0008 hypothetical protein YP_003669660.1 SMART: hypothetical protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: gyc:GYMC61_0009 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; hypothetical protein YP_003669661.1 KEGG: gyc:GYMC61_0010 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_003669662.1 KEGG: gyc:GYMC61_0011 pyridoxine biosynthesis protein; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; indole-3-glycerol phosphate synthase YP_003669663.1 PFAM: SNO glutamine amidotransferase; KEGG: gyc:GYMC61_0012 SNO glutamine amidotransferase YP_003669664.1 KEGG: gka:GK0013 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_003669665.1 KEGG: gka:GK0014 spore peptidoglycan hydrolase (N-acetylglucosaminidase); PFAM: glycoside hydrolase family 18; peptidoglycan-binding lysin domain; SMART: chitinase II; peptidoglycan-binding LysM YP_003669666.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gyc:GYMC61_0015 CMP/dCMP deaminase zinc-binding protein YP_003669667.1 TIGRFAM: DNA polymerase III subunits gamma/tau; PFAM: ATPase AAA; KEGG: gyc:GYMC61_0016 DNA polymerase III subunits gamma/tau; SMART: ATPase AAA YP_003669668.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_0017 hypothetical protein YP_003669669.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; KEGG: gka:GK0019 recombination protein RecR; SMART: Toprim sub domain protein; Helix-hairpin-helix DNA-binding class 1 YP_003669670.1 PFAM: protein of unknown function DUF2508; KEGG: gka:GK0020 hypothetical protein YP_003669671.1 KEGG: gka:GK0021 inhibitor of the pro-sigma K processing machinery; TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA YP_003669672.1 PFAM: Sigma-G inhibitor, Gin; KEGG: gyc:GYMC61_0022 sigma-G inhibitor, Gin YP_003669673.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: gyc:GYMC61_0023 Orn/Lys/Arg decarboxylase major region YP_003669674.1 TIGRFAM: thymidylate kinase; KEGG: gyc:GYMC61_0024 thymidylate kinase; PFAM: thymidylate kinase YP_003669675.1 TIGRFAM: DNA polymerase III subunit delta'; KEGG: gyc:GYMC61_0025 DNA polymerase III subunit delta' YP_003669676.1 PFAM: PSP1 domain protein; KEGG: gyc:GYMC61_0026 PSP1 domain protein YP_003669677.1 PFAM: protein of unknown function DUF972; KEGG: gyc:GYMC61_0027 protein of unknown function DUF972 YP_003669678.1 PFAM: methyltransferase small; KEGG: gyc:GYMC61_0028 methyltransferase small YP_003669679.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gyc:GYMC61_0029 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_003669680.1 KEGG: gyc:GYMC61_0030 transcriptional regulator, AbrB family; TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein YP_003669681.1 KEGG: gka:GK0031 methionyl-tRNA synthetase (methionine--tRNA ligase); TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase subunit beta; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein YP_003669682.1 KEGG: gka:GK0032 deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_003669683.1 PFAM: 3D domain protein; G5 domain protein; protein of unknown function DUF348; KEGG: gyc:GYMC61_0033 3D domain protein YP_003669684.1 TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; KEGG: gka:GK0034 hypothetical protein; SMART: Toprim sub domain protein YP_003669685.1 SMART: ribosomal RNA adenine methylase transferase-like; TIGRFAM: dimethyladenosine transferase; KEGG: gka:GK0035 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase YP_003669686.1 KEGG: gyc:GYMC61_0036 sporulation peptidase YabG; TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG YP_003669687.1 PFAM: protein of unknown function DUF1021; KEGG: gyc:GYMC61_0037 protein of unknown function DUF1021 YP_003669688.1 KEGG: gyc:GYMC61_0038 small acid-soluble spore protein, minoralpha/beta-type SASP YP_003669689.1 KEGG: gyc:GYMC61_0039 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003669690.1 KEGG: gka:GK0040 pur operon repressor; TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase YP_003669691.1 KEGG: gyc:GYMC61_0041 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP YP_003669692.1 PFAM: SpoVG family protein; KEGG: gyc:GYMC61_0042 SpoVG family protein YP_003669693.1 KEGG: gyc:GYMC61_0043 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: nucleotidyl transferase; transferase YP_003669694.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: gyc:GYMC61_0044 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003669695.1 KEGG: gyc:GYMC61_0045 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25-like YP_003669696.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: gyc:GYMC61_0046 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003669697.1 KEGG: gyc:GYMC61_0047 hypothetical protein YP_003669698.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase; helicase domain protein; TRCF domain protein; KEGG: gyc:GYMC61_0048 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_003669699.1 KEGG: gyc:GYMC61_0049 transcriptional regulator, AbrB family; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003669700.1 PFAM: polysaccharide biosynthesis protein; KEGG: gyc:GYMC61_0050 polysaccharide biosynthesis protein YP_003669701.1 KEGG: gyc:GYMC61_0051 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003669702.1 KEGG: gyc:GYMC61_0052 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003669703.1 KEGG: gyc:GYMC61_0053 sporulation protein YabP; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein YP_003669704.1 KEGG: gyc:GYMC61_0054 spore cortex biosynthesis protein YabQ; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like YP_003669705.1 PFAM: septum formation initiator; KEGG: gyc:GYMC61_0055 septum formation initiator YP_003669706.1 PFAM: RNA binding S1 domain protein; KEGG: gka:GK0056 hypothetical protein YP_003669707.1 SMART: protein phosphatase 2C domain protein; TIGRFAM: stage II sporulation protein E; KEGG: gyc:GYMC61_0057 stage II sporulation protein E, protein serine/threonine phosphatase; PFAM: stage II sporulation E family protein YP_003669708.1 KEGG: gyc:GYMC61_0058 hypothetical protein YP_003669709.1 KEGG: gyc:GYMC61_0059 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase YP_003669710.1 KEGG: gyc:GYMC61_0060 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; protein of unkown function DUF1946 PP-loop ATpase YP_003669711.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: gyc:GYMC61_0061 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003669712.1 SMART: ATPase AAA; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: gyc:GYMC61_0062 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular YP_003669713.1 TIGRFAM: transcriptional activator, Baf family; KEGG: gka:GK0063 pantothenate kinase; PFAM: Bvg accessory factor YP_003669714.1 PFAM: Hsp33 protein; KEGG: gyc:GYMC61_0064 HSP33 protein YP_003669715.1 KEGG: gyc:GYMC61_0065 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003669716.1 KEGG: gyc:GYMC61_0066 anthranilate synthase; PFAM: chorismate binding-like; anthranilate synthase component I domain protein YP_003669717.1 KEGG: gyc:GYMC61_0067 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_003669718.1 PFAM: aminotransferase class IV; KEGG: gyc:GYMC61_0068 aminodeoxychorismate lyase YP_003669719.1 TIGRFAM: dihydropteroate synthase; KEGG: gyc:GYMC61_0069 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003669720.1 TIGRFAM: dihydroneopterin aldolase; KEGG: gyc:GYMC61_0070 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_003669721.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: gka:GK0071 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase); PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_003669722.1 KEGG: gyc:GYMC61_0072 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003669723.1 KEGG: gyc:GYMC61_0074 TIM-barrel protein, nifR3 family; TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS YP_003669724.1 KEGG: gyc:GYMC61_0075 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_003669725.1 KEGG: cbk:CLL_A1432 carbonic anhydrase YP_003669726.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: gka:GK0075 transcriptional regulator YP_003669727.1 PFAM: UvrB/UvrC protein; KEGG: gka:GK0076 hypothetical protein YP_003669728.1 PFAM: ATP:guanido phosphotransferase; KEGG: gka:GK0077 ATP:guanido phosphotransferase YP_003669729.1 KEGG: gka:GK0078 ATP-dependent Clp protease ATPase subunit; PFAM: ATPase AAA; ATPase AAA; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; SMART: ATPase AAA YP_003669730.1 KEGG: gyc:GYMC61_0080 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase AAA YP_003669731.1 KEGG: gyc:GYMC61_0081 PilT protein domain protein; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: nucleotide binding protein PINc YP_003669732.1 KEGG: gyc:GYMC61_0082 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003669733.1 KEGG: gyc:GYMC61_0083 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003669734.1 KEGG: gyc:GYMC61_0084 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003669735.1 TIGRFAM: serine O-acetyltransferase; KEGG: gyc:GYMC61_0085 serine O-acetyltransferase YP_003669736.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: gyc:GYMC61_0086 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_003669737.1 KEGG: gyc:GYMC61_0087 ribonuclease III; PFAM: ribonuclease III; SMART: ribonuclease III YP_003669738.1 KEGG: gyc:GYMC61_0088 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_003669739.1 PFAM: protein of unknown function DUF901; KEGG: gyc:GYMC61_0089 protein of unknown function DUF901 YP_003669740.1 TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: gyc:GYMC61_0090 RNA polymerase, sigma-24 subunit, ECF subfamily; SMART: regulatory protein LuxR YP_003669741.1 manually curated; TIGRFAM: ribosomal protein L33; KEGG: gyc:GYMC61_0091 ribosomal protein L33; PFAM: ribosomal protein L33 YP_003669742.1 KEGG: gyc:GYMC61_0092 preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_003669743.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: gyc:GYMC61_0093 NusG antitermination factor; SMART: NGN domain protein; KOW domain protein YP_003669744.1 TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11-like; KEGG: gyc:GYMC61_0094 ribosomal protein L11; SMART: ribosomal protein L11 YP_003669745.1 KEGG: gyc:GYMC61_0095 ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_003669746.1 PFAM: ribosomal protein L10; KEGG: gyc:GYMC61_0096 ribosomal protein L10 YP_003669747.1 KEGG: gyc:GYMC61_0097 ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12 YP_003669748.1 PFAM: methyltransferase small; KEGG: gyc:GYMC61_0098 methyltransferase small YP_003669749.1 KEGG: gyc:GYMC61_0099 DNA-directed RNA polymerase, beta subunit; TIGRFAM: DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase subunit beta; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7 YP_003669750.1 TIGRFAM: DNA-directed RNA polymerase beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: gyc:GYMC61_0100 DNA-directed RNA polymerase beta' subunit; SMART: RNA polymerase I subunit A domain protein YP_003669751.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: gyc:GYMC61_0101 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_003669752.1 KEGG: gyc:GYMC61_0102 ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_003669753.1 KEGG: gyc:GYMC61_0103 ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_003669754.1 KEGG: gka:GK0103 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein YP_003669755.1 KEGG: gyc:GYMC61_0105 translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein YP_003669756.1 KEGG: gyc:GYMC61_0106 ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_003669757.1 KEGG: gyc:GYMC61_0107 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_003669758.1 PFAM: ribosomal protein L4/L1e; KEGG: gyc:GYMC61_0108 ribosomal protein L4/L1e YP_003669759.1 PFAM: ribosomal protein L25/L23; KEGG: gyc:GYMC61_0109 ribosomal protein L25/L23 YP_003669760.1 KEGG: gyc:GYMC61_0110 ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_003669761.1 KEGG: gyc:GYMC61_0111 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_003669762.1 KEGG: gyc:GYMC61_0112 ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_003669763.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; ribosomal protein S3 domain; KH type 2 domain protein; KEGG: gyc:GYMC61_0113 ribosomal protein S3; SMART: KH domain protein YP_003669764.1 KEGG: gyc:GYMC61_0114 ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L10e/L16 YP_003669765.1 KEGG: gyc:GYMC61_0115 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_003669766.1 KEGG: gyc:GYMC61_0116 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_003669767.1 KEGG: gyc:GYMC61_0117 ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_003669768.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: gyc:GYMC61_0118 ribosomal protein L24; SMART: KOW domain protein YP_003669769.1 PFAM: ribosomal protein L5; KEGG: gka:GK0118 50S ribosomal protein L5 YP_003669770.1 PFAM: ribosomal protein S14; KEGG: gyc:GYMC61_0120 ribosomal protein S14 YP_003669771.1 PFAM: ribosomal protein S8; KEGG: gyc:GYMC61_0121 ribosomal protein S8 YP_003669772.1 KEGG: gyc:GYMC61_0122 ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: ribosomal protein L6, alpha-beta domain YP_003669773.1 KEGG: gyc:GYMC61_0123 ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_003669774.1 KEGG: gyc:GYMC61_0124 ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 ; ribosomal protein S5 domain protein YP_003669775.1 KEGG: gyc:GYMC61_0125 ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_003669776.1 KEGG: gyc:GYMC61_0126 ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15 YP_003669777.1 KEGG: gyc:GYMC61_0127 preprotein translocase, SecY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_003669778.1 KEGG: gka:GK0127 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein YP_003669779.1 KEGG: gka:GK0128 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003669780.1 KEGG: gyc:GYMC61_0130 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_003669781.1 KEGG: gyc:GYMC61_0131 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_003669782.1 KEGG: gtn:GTNG_0129 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_003669783.1 KEGG: gyc:GYMC61_0133 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_003669784.1 TIGRFAM: DNA-directed RNA polymerase subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: gyc:GYMC61_0134 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003669785.1 KEGG: gyc:GYMC61_0135 ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_003669786.1 KEGG: gyc:GYMC61_0136 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003669787.1 KEGG: gka:GK0136 cobalt transporter ATP-binding subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_003669788.1 PFAM: cobalt transporter; KEGG: gka:GK0137 cobalt transporter system (permease) YP_003669789.1 KEGG: gka:GK0138 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003669790.1 KEGG: gyc:GYMC61_0140 ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_003669791.1 PFAM: ribosomal protein S9; KEGG: gka:GK0140 30S ribosomal protein S9 YP_003669792.1 PFAM: protein of unknown function DUF2521; KEGG: gka:GK0141 hypothetical protein YP_003669793.1 TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; KEGG: gyc:GYMC61_0143 N-acetylmuramoyl-L-alanine amidase CwlD; SMART: cell wall hydrolase/autolysin YP_003669794.1 PFAM: ATPase-like, ParA/MinD; KEGG: gyc:GYMC61_0144 ATPase-like, ParA/MinD YP_003669795.1 KEGG: gyc:GYMC61_0145 spore germination protein GerD YP_003669796.1 KEGG: gyc:GYMC61_0146 KinB signaling pathway activation protein YP_003669797.1 KEGG: gyc:GYMC61_0147 polysaccharide deacetylase family sporulation protein PdaB; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase YP_003669798.1 KEGG: gyc:GYMC61_0149 arginase; TIGRFAM: arginase; PFAM: arginase/agmatinase/formiminoglutamase YP_003669799.1 KEGG: gyc:GYMC61_0150 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-W factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003669800.1 KEGG: gyc:GYMC61_0151 transmembrane anti-sigma factor YP_003669801.1 PFAM: protein of unknown function DUF147; KEGG: gyc:GYMC61_0152 protein of unknown function DUF147 YP_003669802.1 PFAM: YbbR family protein; KEGG: gyc:GYMC61_0153 YbbR family protein YP_003669803.1 KEGG: gyc:GYMC61_0154 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003669804.1 KEGG: gyc:GYMC61_0155 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II YP_003669805.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0178 hypothetical protein YP_003669806.1 KEGG: gka:GK0179 uridine kinase YP_003669807.1 KEGG: gyc:GYMC61_1036 hypothetical protein YP_003669808.1 KEGG: gyc:GYMC61_1037 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003669809.1 PFAM: protein of unknown function DUF817; KEGG: gyc:GYMC61_1038 protein of unknown function DUF817 YP_003669810.1 KEGG: gyc:GYMC61_1039 hypothetical protein YP_003669811.1 PFAM: TatD-related deoxyribonuclease; KEGG: gka:GK0184 deoxyribonuclease YP_003669812.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: gyc:GYMC61_1041 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: ATPase AAA; PAS domain containing protein YP_003669813.1 KEGG: gka:GK0186 amino acid permease; manually curated; PFAM: amino acid permease-associated region YP_003669814.1 KEGG: gyc:GYMC61_1043 delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase YP_003669815.1 KEGG: gyc:GYMC61_1044 ornithine aminotransferase; TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III YP_003669816.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gyc:GYMC61_1045 Glu/Leu/Phe/Val dehydrogenase YP_003669817.1 PFAM: SNARE associated Golgi protein; KEGG: gka:GK0190 alkaline phosphatase YP_003669818.1 PFAM: transporter permease; KEGG: gka:GK0191 ferrichrome ABC transporter permease YP_003669819.1 PFAM: transporter permease; KEGG: gka:GK0192 ferrichrome ABC transporter permease YP_003669820.1 PFAM: periplasmic binding protein; KEGG: gka:GK0193 ferrichrome ABC transporter (ferrichrome-binding protein) YP_003669821.1 KEGG: gka:GK0194 ferrichrome ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003669822.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; hypothetical protein; hypothetical protein; helix-turn-helix Fis-type; KEGG: gyc:GYMC61_1051 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: PAS domain containing protein; ATPase AAA YP_003669823.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gka:GK0197 acyl-CoA dehydrogenase YP_003669824.1 KEGG: gyc:GYMC61_1053 hypothetical protein YP_003669825.1 PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_1054 aldehyde dehydrogenase YP_003669826.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gyc:GYMC61_1055 iron-containing alcohol dehydrogenase YP_003669827.1 PFAM: DoxX family protein; KEGG: gyc:GYMC61_1056 DoxX family protein YP_003669828.1 PFAM: DSBA oxidoreductase; KEGG: gka:GK0202 protein-disulfide isomerase YP_003669829.1 PFAM: DinB family protein; KEGG: gka:GK0203 hypothetical protein YP_003669830.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: gyc:GYMC61_1060 integral membrane sensor signal transduction histidine kinase YP_003669831.1 KEGG: gyc:GYMC61_1061 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003669832.1 PFAM: ABC transporter; KEGG: gyc:GYMC61_1062 ABC-2 type transporter YP_003669833.1 PFAM: ABC transporter; KEGG: gyc:GYMC61_1063 ABC-2 type transporter YP_003669834.1 KEGG: gyc:GYMC61_1064 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_003669835.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gka:GK0210 intracellular alkaline serine protease YP_003669836.1 PFAM: sulfatase; KEGG: gyc:GYMC61_1066 sulfatase YP_003669837.1 TIGRFAM: potassium uptake protein, TrkH family; KEGG: gyc:GYMC61_1067 potassium uptake protein, TrkH family; PFAM: cation transporter YP_003669838.1 KEGG: gyc:GYMC61_1068 hypothetical protein YP_003669839.1 KEGG: gyc:GYMC61_1069 sporulation protein YtaF; TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204 YP_003669840.1 PFAM: SpoOM family protein; KEGG: gyc:GYMC61_1070 SpoOM family protein YP_003669841.1 PFAM: Coat F domain protein; KEGG: gyc:GYMC61_1071 coat F domain protein YP_003669842.1 PFAM: ROK family protein; KEGG: gyc:GYMC61_1072 ROK family protein YP_003669843.1 KEGG: gyc:GYMC61_1073 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: bacitracin resistance protein BacA YP_003669844.1 KEGG: gyc:GYMC61_1076 hypothetical protein YP_003669845.1 KEGG: gyc:GYMC61_1077 hypothetical protein YP_003669846.1 TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: gyc:GYMC61_1080 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; glycosyltransferase 28 domain YP_003669847.1 PFAM: polysaccharide deacetylase; KEGG: gyc:GYMC61_1081 polysaccharide deacetylase YP_003669848.1 PFAM: SNARE associated Golgi protein; KEGG: gka:GK0221 alkaline phosphatase YP_003669849.1 PFAM: monogalactosyldiacylglycerol synthase; KEGG: gyc:GYMC61_1083 monogalactosyldiacylglycerol synthase YP_003669850.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: gyc:GYMC61_1084 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_003669851.1 KEGG: gyc:GYMC61_1085 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D -alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003669852.1 KEGG: gyc:GYMC61_1087 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase YP_003669853.1 PFAM: rhomboid family protein; KEGG: gka:GK0227 hypothetical protein YP_003669854.1 KEGG: gyc:GYMC61_1089 holo-acyl-carrier-protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_003669855.1 KEGG: gyc:GYMC61_1090 hypothetical protein YP_003669856.1 TIGRFAM: alanine racemase; KEGG: gka:GK0231 alanine racemase; PFAM: alanine racemase domain protein YP_003669857.1 KEGG: gyc:GYMC61_1092 CopG family transcriptional regulator YP_003669858.1 PFAM: PemK family protein; KEGG: afl:Aflv_0199 toxin-antitoxin addiction module toxin component MazF (an endoRNAse) YP_003669859.1 KEGG: gyc:GYMC61_1094 Tex-like protein protein-like protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_003669860.1 manually curated; KEGG: gyc:GYMC61_1095 hypothetical protein YP_003669861.1 KEGG: gyc:GYMC61_1096 protein of unknown function DUF335 SprT; PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT YP_003669862.1 PFAM: protein of unknown function UPF0079; KEGG: gyc:GYMC61_1097 protein of unknown function UPF0079 YP_003669863.1 PFAM: peptidase M22 glycoprotease; KEGG: gyc:GYMC61_1098 peptidase M22 glycoprotease YP_003669864.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: gyc:GYMC61_1099 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003669865.1 KEGG: gyc:GYMC61_1100 metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_003669866.1 KEGG: gyc:GYMC61_1101 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003669867.1 KEGG: gyc:GYMC61_1102 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region YP_003669868.1 PFAM: CoA-binding protein; Rex DNA-binding domain protein; KEGG: gyc:GYMC61_1103 CoA-binding protein YP_003669869.1 KEGG: gyc:GYMC61_1104 twin-arginine translocation protein, TatA/E family subunit; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003669870.1 KEGG: gyc:GYMC61_1105 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_003669871.1 KEGG: gyc:GYMC61_1106 hypothetical protein YP_003669872.1 KEGG: gyc:GYMC61_1107 hypothetical protein YP_003669873.1 PFAM: hypothetical protein; KEGG: gyc:GYMC61_1108 abortive infection protein YP_003669874.1 PFAM: chaperonin Cpn10; KEGG: gyc:GYMC61_1109 chaperonin Cpn10 YP_003669875.1 KEGG: gyc:GYMC61_1110 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003669876.1 PFAM: integrase; KEGG: saw:SAHV_2013 hypothetical protein YP_003669877.1 KEGG: tcr:504179.50 hypothetical protein YP_003669878.1 PFAM: protein of unknown function DUF955; KEGG: gtn:GTNG_2861 hypothetical protein YP_003669879.1 KEGG: bha:BH3549 immunity repressor protein (phage-related protein); PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003669880.1 KEGG: bcl:ABC1851 repressor protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003669881.1 PFAM: phage antirepressor protein; BRO domain protein; KEGG: gka:GK0519 phage associated-antirepressor YP_003669882.1 KEGG: bld:BLi01434 hypothetical protein YP_003669883.1 KEGG: gtn:GTNG_2858 hypothetical protein YP_003669884.1 KEGG: neq:NEQ321 hypothetical protein YP_003669885.1 KEGG: gtn:GTNG_2857 hypothetical protein YP_003669886.1 KEGG: gtn:GTNG_2856 hypothetical protein YP_003669887.1 PFAM: Gp157 family protein; KEGG: gtn:GTNG_2855 hypothetical protein YP_003669888.1 PFAM: ERF family protein; KEGG: gtn:GTNG_2854 hypothetical protein YP_003669889.1 KEGG: gtn:GTNG_2853 hypothetical protein YP_003669890.1 KEGG: snt:SPT_0504 cell wall surface anchor family protein YP_003669891.1 KEGG: gtn:GTNG_2852 hypothetical protein; TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region YP_003669892.1 KEGG: gtn:GTNG_2851 hypothetical protein YP_003669893.1 PFAM: DnaB domain protein helicase; KEGG: gtn:GTNG_2850 replicative DNA helicase YP_003669894.1 KEGG: gtn:GTNG_2849 hypothetical protein YP_003669895.1 SMART: HNH nuclease; KEGG: gtn:GTNG_2848 hypothetical protein YP_003669897.1 KEGG: gtn:GTNG_2847 single-strand DNA binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003669898.1 KEGG: gtn:GTNG_2846 hypothetical protein YP_003669899.1 KEGG: gtn:GTNG_2845 hypothetical protein YP_003669900.1 PFAM: dUTPase; KEGG: gtn:GTNG_2844 cytoplasmic protein YP_003669901.1 KEGG: gtn:GTNG_2843 hypothetical protein YP_003669902.1 KEGG: gtn:GTNG_2842 hypothetical protein YP_003669903.1 TIGRFAM: thymidylate synthase; KEGG: gyc:GYMC61_2589 thymidylate synthase; PFAM: thymidylate synthase YP_003669904.1 TIGRFAM: phage transcriptional regulator, RinA family; KEGG: gtn:GTNG_2841 GP53 protein YP_003669905.1 KEGG: bbe:BBR47_53530 hypothetical protein YP_003669906.1 KEGG: ape:APE_0412 hypothetical protein YP_003669907.1 manually curated; KEGG: cho:Chro.10206 hypothetical protein YP_003669909.1 PFAM: protein of unknown function DUF2513; KEGG: aat:D11S_1185 hypothetical protein YP_003669910.1 KEGG: gtn:GTNG_2830 hypothetical protein YP_003669911.1 KEGG: gtn:GTNG_2829 terminase large subunit, TIGRFAM: phage uncharacterized protein; PFAM: protein of unknown function DUF264 YP_003669912.1 KEGG: gtn:GTNG_2828 portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_003669913.1 KEGG: gtn:GTNG_2827 hypothetical protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7 YP_003669914.1 KEGG: gtn:GTNG_2826 structural protein YP_003669915.1 KEGG: gtn:GTNG_2825 structural protein YP_003669916.1 KEGG: gtn:GTNG_2824 hypothetical protein YP_003669917.1 KEGG: gtn:GTNG_2823 hypothetical protein YP_003669918.1 KEGG: gtn:GTNG_2822 hypothetical protein YP_003669919.1 KEGG: gtn:GTNG_2821 hypothetical protein YP_003669920.1 KEGG: ppa:PAS_chr1-1_0437 Ubiquitin-conjugating enzyme involved in ER-associated protein degradation YP_003669921.1 KEGG: gtn:GTNG_2819 hypothetical protein YP_003669922.1 KEGG: gtn:GTNG_2817 hypothetical protein YP_003669923.1 PFAM: TMP repeat-containing protein; KEGG: gtn:GTNG_2814 prophage LambdaBa01, membrane protein YP_003669924.1 KEGG: gtn:GTNG_2813 hypothetical protein; TIGRFAM: phage tail component; PFAM: tail component family protein YP_003669925.1 KEGG: gtn:GTNG_2812 hypothetical protein YP_003669926.1 TIGRFAM: phage minor structural protein; KEGG: gtn:GTNG_2811 hypothetical protein YP_003669927.1 KEGG: gtn:GTNG_2810 hypothetical protein YP_003669928.1 KEGG: gtn:GTNG_2809 hypothetical protein YP_003669929.1 PFAM: glycoside hydrolase family 18; KEGG: gtn:GTNG_2808 hypothetical protein YP_003669930.1 KEGG: gtn:GTNG_2807 hypothetical protein YP_003669931.1 KEGG: gtn:GTNG_2806 hypothetical protein YP_003669932.1 KEGG: bay:RBAM_020310 YqgA YP_003669933.1 KEGG: tet:TTHERM_00533920 hypothetical protein YP_003669934.1 KEGG: gtn:GTNG_2805 N-acetylmuramoyl-L-alanine amidase, sporulationmother cell wall hydrolase; PFAM: cell wall hydrolase/autolysin; sporulation domain protein; SMART: cell wall hydrolase/autolysin YP_003669935.1 KEGG: oih:OB1017 hypothetical protein YP_003669936.1 KEGG: stp:Strop_3124 peptidase S1 and S6, chymotrypsin/Hap YP_003669937.1 KEGG: gyc:GYMC61_1120 fumarate hydratase, class II; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_003669938.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: gka:GK0251 methanol dehydrogenase regulatory protein (MoxR protein) YP_003669939.1 PFAM: protein of unknown function DUF58; KEGG: gyc:GYMC61_1118 protein of unknown function DUF58 YP_003669940.1 KEGG: gka:GK0253 hypothetical protein; PFAM: transglutaminase; SMART: transglutaminase YP_003669941.1 KEGG: gyc:GYMC61_1116 GMP synthase, large subunit; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like YP_003669942.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: gyc:GYMC61_1115 xanthine/uracil/vitamin C permease YP_003669943.1 manually curated; KEGG: gyc:GYMC61_1122 hypothetical protein YP_003669944.1 KEGG: gyc:GYMC61_1124 hypothetical protein YP_003669945.1 PFAM: heat shock protein Hsp20; KEGG: gyc:GYMC61_1128 small heat shock protein YP_003669946.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: gka:GK0257 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_003669947.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: gyc:GYMC61_1130 phosphoribosylaminoimidazole carboxylase, ATPase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003669948.1 KEGG: gyc:GYMC61_1131 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; adenylosuccinate lyase-like YP_003669949.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: gka:GK0260 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003669950.1 KEGG: gka:GK0261 phosphoribosylformylglycinamidine synthase subunit PurS; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS YP_003669951.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: gka:GK0262 phosphoribosylformylglycinamidine synthase I; PFAM: ThiJ/PfpI domain protein YP_003669952.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: gyc:GYMC61_1135 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003669953.1 KEGG: gka:GK0264 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_003669954.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: gka:GK0265 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003669955.1 KEGG: gyc:GYMC61_1138 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase YP_003669956.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: gka:GK0267 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_003669957.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: gka:GK0268 phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, N-domain; phosphoribosylglycinamide synthetase, C-domain YP_003669958.1 KEGG: gka:GK0269 hypothetical protein YP_003669959.1 KEGG: gka:GK0270 hypothetical protein YP_003669960.1 KEGG: gyc:GYMC61_1142 adenine deaminase; PFAM: amidohydrolase YP_003669961.1 KEGG: gka:GK0272 hypothetical protein YP_003669962.1 KEGG: gka:GK0273 hypothetical protein; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor YP_003669963.1 TIGRFAM: geranylgeranylglyceryl phosphate synthase family protein; KEGG: gyc:GYMC61_1145 geranylgeranylglyceryl phosphate synthase family protein; PFAM: PcrB family protein YP_003669964.1 KEGG: gyc:GYMC61_1146 ATP-dependent DNA helicase PcrA; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase YP_003669965.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: gyc:GYMC61_1147 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; helix-hairpin-helix motif; BRCT domain protein YP_003669966.1 PFAM: CamS sex pheromone cAM373 family protein; KEGG: gyc:GYMC61_1148 CamS sex pheromone cAM373 family protein YP_003669967.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_1149 hypothetical protein YP_003669968.1 PFAM: amine oxidase; KEGG: gyc:GYMC61_1150 amine oxidase YP_003669969.1 KEGG: gka:GK0279 hypothetical protein YP_003669970.1 KEGG: gka:GK0280 hypothetical protein YP_003669971.1 PFAM: protein of unknown function DUF820; KEGG: afl:Aflv_0261 endonuclease, Uma2 family (restriction endonuclease fold) YP_003669972.1 KEGG: gyc:GYMC61_1153 glutamyl-tRNA(Gln) amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_003669973.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; KEGG: gyc:GYMC61_1154 glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: amidase YP_003669974.1 KEGG: gyc:GYMC61_1155 glutamyl-tRNA(Gln) amidotransferase subunit beta; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase YP_003669975.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: gka:GK0284 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003669976.1 KEGG: gka:GK0287 hypothetical protein YP_003669977.1 KEGG: gyc:GYMC61_1160 NADH dehydrogenase (ubiquinone) chain 4 YP_003669978.1 KEGG: gka:GK0289 hypothetical protein YP_003669979.1 KEGG: gka:GK0290 hypothetical protein YP_003669980.1 KEGG: gka:GK0291 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003669981.1 manually curated; PFAM: response regulator receiver; transcriptional regulator; KEGG: gtn:GTNG_0269 subtilin biosynthesis regulatory protein SpaR; SMART: response regulator receiver YP_003669982.1 KEGG: gyc:GYMC61_1167 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003669983.1 KEGG: gyc:GYMC61_1168 SpaI YP_003669984.1 KEGG: gyc:GYMC61_1169 lantibiotic ABC transporter permease YP_003669985.1 KEGG: gyc:GYMC61_1170 SpaE YP_003669986.1 KEGG: gyc:GYMC61_1171 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003669987.1 PFAM: polyprenyl synthetase; KEGG: afl:Aflv_0547 competence regulatory protein ComQ YP_003669988.1 PFAM: competence pheromone ComX; KEGG: afl:Aflv_0548 DNA-directed RNA polymerase specialized sigma factor, ComX YP_003669989.1 KEGG: gtn:GTNG_2064 sensor protein ComP; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein YP_003669990.1 KEGG: gtn:GTNG_2063 two-component response regulator ComA; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003669991.1 PFAM: protein of unknown function DUF214; KEGG: oih:OB0163 hypothetical protein YP_003669992.1 KEGG: bld:BLi01650 YknY; PFAM: ABC transporter related; SMART: ATPase AAA YP_003669993.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: bsu:BSU14350 efflux permease YP_003669994.1 KEGG: bha:BH3124 hypothetical protein YP_003669996.1 PFAM: peptidase M50; KEGG: cpy:Cphy_3579 hypothetical protein YP_003669997.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: cpy:Cphy_3578 UBA/ThiF-type NAD/FAD binding protein YP_003669998.1 KEGG: lsa:LSA1077 integral membrane cell division protein, FtsW YP_003669999.1 KEGG: gwc:GWCH70_0635 sodium ABC transporter permease YP_003670000.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_1174 binding-protein-dependent transport systems inner membrane component YP_003670001.1 PFAM: transposase IS4 family protein; KEGG: gyc:GYMC61_1559 transposase IS4 family protein YP_003670002.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: gka:GK0315 hypothetical protein YP_003670003.1 KEGG: gka:GK0316 coiled-coil protein YP_003670004.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_1178 hypothetical protein YP_003670005.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_1179 hypothetical protein YP_003670006.1 PFAM: SMC domain protein; KEGG: gyc:GYMC61_1180 SMC domain protein YP_003670007.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_1181 hypothetical protein YP_003670008.1 KEGG: gyc:GYMC61_1182 hypothetical protein YP_003670009.1 PFAM: peptidase S58 DmpA; KEGG: gyc:GYMC61_1200 peptidase S58 DmpA YP_003670010.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_1203 major facilitator superfamily MFS_1 YP_003670011.1 PFAM: PspA/IM30 family protein; KEGG: gka:GK0325 hypothetical protein YP_003670012.1 manually curated; KEGG: gyc:GYMC61_1205 hypothetical protein YP_003670013.1 KEGG: gyc:GYMC61_1206 hypothetical protein YP_003670014.1 KEGG: gyc:GYMC61_1207 hypothetical protein YP_003670015.1 KEGG: gyc:GYMC61_1208 hypothetical protein YP_003670016.1 TIGRFAM: YhgE/Pip C-terminal domain protein; YhgE/Pip N-terminal domain protein; KEGG: gyc:GYMC61_1210 YhgE/Pip C-terminal domain protein YP_003670017.1 PFAM: regulatory protein TetR; KEGG: gyc:GYMC61_1211 TetR family transcriptional regulator YP_003670018.1 KEGG: gyc:GYMC61_1212 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003670019.1 KEGG: gyc:GYMC61_1213 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003670020.1 PFAM: PepSY-associated TM helix domain protein; KEGG: gyc:GYMC61_1214 PepSY-associated TM helix domain protein YP_003670021.1 KEGG: gka:GK0332 serine protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003670022.1 KEGG: cbe:Cbei_3683 cell wall-associated hydrolase-like protein YP_003670023.1 KEGG: gyc:GYMC61_1219 hypothetical protein YP_003670024.1 KEGG: gyc:GYMC61_1219 hypothetical protein YP_003670025.1 PFAM: protein of unknown function DUF2253, membrane; KEGG: gyc:GYMC61_1220 protein of unknown function DUF2253, membrane YP_003670026.1 KEGG: gyc:GYMC61_1221 hypothetical protein YP_003670027.1 KEGG: gka:GK0339 hypothetical protein YP_003670028.1 KEGG: gyc:GYMC61_1223 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_003670029.1 KEGG: gyc:GYMC61_1224 diacylglycerol kinase catalytic region; PFAM: diacylglycerol kinase; SMART: diacylglycerol kinase catalytic region YP_003670030.1 KEGG: gyc:GYMC61_1225 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; methyltransferase type 11 YP_003670031.1 PFAM: N-6 DNA methylase; KEGG: gka:GK0343 type I restriction modification system M subunit (site-specific DNA-methyltransferase subunit) YP_003670032.1 PFAM: restriction modification system DNA specificity domain; KEGG: mmw:Mmwyl1_3199 restriction modification system DNA specificity subunit YP_003670033.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; helicase; KEGG: gka:GK0346 type I restriction-modification system R subunit (endonuclease); SMART: DEAD-like helicase YP_003670034.1 KEGG: gka:GK0353 hypothetical protein YP_003670035.1 KEGG: gyc:GYMC61_1231 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter YP_003670036.1 KEGG: gyc:GYMC61_1232 hypothetical protein YP_003670037.1 KEGG: gyc:GYMC61_1233 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003670038.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: gyc:GYMC61_1234 activator of HSP90 ATPase 1 family protein YP_003670039.1 KEGG: gyc:GYMC61_1235 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (uracil-5)-methyltransferase YP_003670040.1 PFAM: SpoOM family protein; KEGG: gyc:GYMC61_1236 SpoOM family protein YP_003670041.1 PFAM: NUDIX hydrolase; KEGG: gyc:GYMC61_1237 NUDIX hydrolase YP_003670042.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: gyc:GYMC61_1238 oxidoreductase domain protein YP_003670043.1 PFAM: nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: gyc:GYMC61_1239 nucleotidyl transferase YP_003670044.1 PFAM: glycosyl transferase group 1; KEGG: gyc:GYMC61_1240 glycosyl transferase group 1 YP_003670045.1 KEGG: gka:GK0362 hypothetical protein YP_003670046.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: gyc:GYMC61_1242 phosphomannomutase YP_003670047.1 KEGG: gyc:GYMC61_1243 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003670048.1 KEGG: gyc:GYMC61_1245 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS YP_003670049.1 SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; PAS domain containing protein; TIGRFAM: PAS sensor protein; KEGG: gyc:GYMC61_1246 PAS/PAC sensor protein; PFAM: stage II sporulation E family protein; PAS fold-3 domain protein YP_003670050.1 PFAM: RDD domain containing protein; KEGG: gka:GK0368 hypothetical protein YP_003670051.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rso:RS00881 diaminopimelate decarboxylase protein YP_003670052.1 PFAM: major facilitator superfamily MFS_1; KEGG: dau:Daud_0476 major facilitator transporter YP_003670053.1 PFAM: IucA/IucC family protein; KEGG: ser:SERP1781 hypothetical protein YP_003670054.1 PFAM: IucA/IucC family protein; KEGG: ftn:FTN_1682 siderophore biosynthesis protein YP_003670055.1 KEGG: gka:GK0369 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003670056.1 KEGG: gka:GK0370 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_003670057.1 KEGG: gyc:GYMC61_0563 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family YP_003670058.1 PFAM: aminotransferase class I and II; KEGG: gyc:GYMC61_1251 aminotransferase class I and II YP_003670059.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: gyc:GYMC61_1252 thiamine pyrophosphate protein TPP binding domain protein YP_003670060.1 PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_1253 aldehyde dehydrogenase YP_003670061.1 PFAM: saccharopine dehydrogenase; KEGG: gyc:GYMC61_1254 saccharopine dehydrogenase YP_003670062.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_1255 major facilitator superfamily MFS_1 YP_003670063.1 KEGG: gyc:GYMC61_1256 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR YP_003670064.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: gka:GK0377 carbon monoxide dehydrogenase small subunit YP_003670065.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: gyc:GYMC61_1258 molybdopterin dehydrogenase FAD-binding protein YP_003670066.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: gyc:GYMC61_1259 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein YP_003670067.1 TIGRFAM: xanthine dehydrogenase accessory protein pucB; KEGG: gyc:GYMC61_1260 xanthine dehydrogenase accessory protein PucB YP_003670068.1 KEGG: gyc:GYMC61_1261 xanthine dehydrogenase; PFAM: protein of unknown function DUF182 YP_003670069.1 KEGG: gyc:GYMC61_1262 hypothetical protein YP_003670070.1 KEGG: gyc:GYMC61_1263 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_003670071.1 PFAM: HutP family protein; KEGG: gyc:GYMC61_1264 HutP family protein YP_003670072.1 PFAM: phenylalanine/histidine ammonia-lyase; manually curated; KEGG: gyc:GYMC61_1265 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase YP_003670073.1 PFAM: integral membrane protein TerC; KEGG: gyc:GYMC61_1266 integral membrane protein TerC YP_003670074.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gka:GK0387 D-isomer specific 2-hydroxyacid dehydrogenase YP_003670075.1 KEGG: gyc:GYMC61_1269 hypothetical protein YP_003670076.1 KEGG: gyc:GYMC61_1271 hypothetical protein YP_003670077.1 PFAM: protein of unknown function DUF162; KEGG: gyc:GYMC61_1272 protein of unknown function DUF162 YP_003670078.1 KEGG: gyc:GYMC61_1273 iron-sulfur cluster binding protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162 YP_003670079.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gyc:GYMC61_1274 protein of unknown function DUF224 cysteine-rich region domain protein YP_003670080.1 KEGG: gyc:GYMC61_1275 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003670081.1 KEGG: gyc:GYMC61_1276 L-lactate transport; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_003670082.1 PFAM: NLP/P60 protein; KEGG: gka:GK0400 hypothetical protein YP_003670083.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: gyc:GYMC61_1280 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003670084.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: gyc:GYMC61_1281 DnaJ-like, subfamily C, member 28, conserved domain protein YP_003670085.1 KEGG: gyc:GYMC61_1282 hypothetical protein YP_003670086.1 KEGG: gyc:GYMC61_3132 hypothetical protein YP_003670087.1 PFAM: carboxylesterase type B; KEGG: gyc:GYMC61_3129 carboxylesterase YP_003670088.1 KEGG: gyc:GYMC61_3128 hypothetical protein YP_003670089.1 KEGG: gyc:GYMC61_3127 preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_003670090.1 KEGG: gyc:GYMC61_3126 carboxylesterase YP_003670091.1 TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; ribonuclease B OB region domain; RNA binding S1 domain protein; KEGG: gyc:GYMC61_3125 ribonuclease R; SMART: Cold shock protein YP_003670092.1 KEGG: gyc:GYMC61_3124 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_003670093.1 KEGG: gyc:GYMC61_3121 hypothetical protein YP_003670094.1 KEGG: gyc:GYMC61_3120 hypothetical protein YP_003670095.1 KEGG: gyc:GYMC61_3119 hypothetical protein YP_003670096.1 KEGG: gyc:GYMC61_3118 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003670097.1 PFAM: propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: gyc:GYMC61_3117 propeptide PepSY amd peptidase M4 YP_003670098.1 KEGG: gyc:GYMC61_3116 hypothetical protein YP_003670099.1 PFAM: manganese containing catalase; KEGG: gyc:GYMC61_3115 manganese containing catalase YP_003670100.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gyc:GYMC61_3114 LysR family transcriptional regulator YP_003670101.1 KEGG: gka:GK3034 4-hydroxyphenylacetate-3-hydroxylase; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; PFAM: 4-hydroxyphenylacetate 3-hydroxylase YP_003670102.1 KEGG: gyc:GYMC61_3112 3,4-dihydroxyphenylacetate 2,3-dioxygenase; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003670103.1 KEGG: gyc:GYMC61_3111 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003670104.1 KEGG: gyc:GYMC61_3110 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate hydrolase YP_003670105.1 KEGG: gka:GK3030 hypothetical protein; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate hydrolase YP_003670106.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: gyc:GYMC61_3108 5-carboxymethyl-2-hydroxymuconate isomerase YP_003670107.1 KEGG: gyc:GYMC61_3107 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003670108.1 KEGG: gyc:GYMC61_3106 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003670109.1 PFAM: extracellular ligand-binding receptor; KEGG: gyc:GYMC61_3105 extracellular ligand-binding receptor YP_003670110.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_3104 inner-membrane translocator YP_003670111.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_3103 inner-membrane translocator YP_003670112.1 KEGG: gyc:GYMC61_3102 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003670113.1 KEGG: gyc:GYMC61_3101 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003670114.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: gyc:GYMC61_3100 flavin reductase YP_003670115.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gyc:GYMC61_3099 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003670116.1 KEGG: gyc:GYMC61_3098 pyruvate kinase; PFAM: pyruvate kinase barrel YP_003670117.1 PFAM: BioY protein; KEGG: gyc:GYMC61_3097 BioY protein YP_003670118.1 TIGRFAM: dethiobiotin synthase; KEGG: gyc:GYMC61_3096 dethiobiotin synthase YP_003670119.1 PFAM: aminotransferase class-III; KEGG: gyc:GYMC61_3095 aminotransferase class-III YP_003670120.1 KEGG: gyc:GYMC61_3094 hypothetical protein YP_003670121.1 KEGG: gtn:GTNG_2968 hypothetical protein YP_003670122.1 PFAM: Coat F domain protein; KEGG: gka:GK3012 hypothetical protein YP_003670123.1 KEGG: gka:GK3011 hypothetical protein YP_003670124.1 KEGG: gyc:GYMC61_3090 proline dehydrogenase; PFAM: Proline dehydrogenase YP_003670125.1 KEGG: gyc:GYMC61_3089 hypothetical protein YP_003670126.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_3088 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_003670127.1 KEGG: gyc:GYMC61_3087 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003670128.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_3086 acyl-CoA dehydrogenase domain protein YP_003670129.1 PFAM: arsenate reductase; KEGG: gyc:GYMC61_3085 arsenate reductase protein YP_003670130.1 KEGG: gyc:GYMC61_3084 glycine cleavage system H protein; TIGRFAM: glycine cleavage system protein H; PFAM: glycine cleavage H-protein YP_003670131.1 KEGG: gyc:GYMC61_3083 hypothetical protein YP_003670132.1 KEGG: gyc:GYMC61_3082 toprim domain protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein YP_003670133.1 KEGG: gyc:GYMC61_3081 thioredoxin YP_003670134.1 KEGG: gyc:GYMC61_3080 hypothetical protein YP_003670135.1 KEGG: gka:GK2999 ABC transporter ATP-binding protein; PFAM: ABC transporter; NIL domain; SMART: ATPase AAA YP_003670136.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_3078 binding-protein-dependent transport systems inner membrane component YP_003670137.1 PFAM: NLPA lipoprotein; KEGG: gka:GK2997 amino acid ABC transporter (substrate binding protein) (lipoprotein) YP_003670139.1 KEGG: gyc:GYMC61_3076 hypothetical protein YP_003670140.1 KEGG: gka:GK2996 hypothetical protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase YP_003670141.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: gyc:GYMC61_3074 FeS assembly ATPase SufC; SMART: ATPase AAA YP_003670142.1 KEGG: gyc:GYMC61_3073 FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_003670143.1 KEGG: gyc:GYMC61_3072 cysteine desulfurase, SufS subfamily; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_003670144.1 KEGG: gyc:GYMC61_3071 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein YP_003670145.1 KEGG: gyc:GYMC61_3070 FeS assembly protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_003670146.1 KEGG: gyc:GYMC61_3068 hypothetical protein YP_003670147.1 KEGG: gyc:GYMC61_3065 hypothetical protein YP_003670148.1 KEGG: gyc:GYMC61_3064 hypothetical protein YP_003670149.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: gyc:GYMC61_3063 lysine exporter protein (LysE/YggA) YP_003670150.1 PFAM: protein of unknown function DUF72; KEGG: gyc:GYMC61_3062 protein of unknown function DUF72 YP_003670151.1 PFAM: protein of unknown function DUF81; KEGG: gyc:GYMC61_3061 protein of unknown function DUF81 YP_003670152.1 PFAM: metallophosphoesterase; 5'-nucleotidase domain protein; KEGG: gyc:GYMC61_3060 metallophosphoesterase YP_003670153.1 PFAM: Domain of unknown function DUF1805; KEGG: gyc:GYMC61_3059 domain of unknown function DUF1805 YP_003670154.1 KEGG: gyc:GYMC61_3058 sporulation protein YunB; TIGRFAM: sporulation protein YunB; PFAM: sporulation protein YunB-like YP_003670155.1 PFAM: extracellular ligand-binding receptor; KEGG: gyc:GYMC61_3057 extracellular ligand-binding receptor YP_003670156.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_3056 inner-membrane translocator YP_003670157.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_3055 inner-membrane translocator YP_003670158.1 KEGG: gka:GK2977 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase YP_003670159.1 KEGG: gyc:GYMC61_3053 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003670160.1 PFAM: peptidase M23; KEGG: gyc:GYMC61_3052 peptidase M23 YP_003670161.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: gyc:GYMC61_3051 lipoic acid synthetase; PFAM: radical SAM domain protein YP_003670162.1 PFAM: sporulation lipoprotein YhcN/YlaJ-like; KEGG: gka:GK2973 hypothetical protein YP_003670163.1 PFAM: protein of unknown function DUF1027; KEGG: gka:GK2972 hypothetical protein YP_003670164.1 KEGG: gyc:GYMC61_3048 hypothetical protein YP_003670165.1 KEGG: gyc:GYMC61_3047 hypothetical protein YP_003670166.1 PFAM: protein of unknown function DUF86; KEGG: gyc:GYMC61_3046 protein of unknown function DUF86 YP_003670167.1 KEGG: gka:GK2968 hypothetical protein; TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003670168.1 PFAM: phosphatidylglycerophosphatase A; KEGG: gyc:GYMC61_3044 phosphatidylglycerophosphatase A YP_003670169.1 TIGRFAM: spore coat protein YutH; KEGG: gyc:GYMC61_3043 spore coat protein YutH YP_003670170.1 KEGG: gyc:GYMC61_3042 glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_003670171.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: gyc:GYMC61_3041 homoserine dehydrogenase YP_003670172.1 KEGG: gyc:GYMC61_3040 threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit YP_003670173.1 KEGG: gyc:GYMC61_3039 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003670174.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: gyc:GYMC61_3037 nitrogen-fixing NifU domain protein YP_003670175.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_3036 hypothetical protein YP_003670176.1 KEGG: gyc:GYMC61_3035 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; manually curated; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003670177.1 PFAM: protein of unknown function DUF1450; KEGG: gyc:GYMC61_3034 protein of unknown function DUF1450 YP_003670178.1 TIGRFAM: diaminopimelate epimerase; KEGG: gyc:GYMC61_3033 diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003670179.1 KEGG: gka:GK2956 hypothetical protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003670180.1 KEGG: gyc:GYMC61_3031 hypothetical protein YP_003670181.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gka:GK2954 thioredoxin reductase YP_003670182.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gyc:GYMC61_3029 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003670183.1 PFAM: NUDIX hydrolase; KEGG: gyc:GYMC61_3028 NUDIX hydrolase YP_003670184.1 KEGG: gyc:GYMC61_3027 hypothetical protein YP_003670185.1 KEGG: gyc:GYMC61_3026 hypothetical protein YP_003670186.1 PFAM: 3D domain protein; KEGG: gka:GK2949 hypothetical protein YP_003670187.1 PFAM: periplasmic binding protein; KEGG: gyc:GYMC61_3024 periplasmic binding protein YP_003670188.1 PFAM: Putitive phosphate transport regulator; KEGG: gyc:GYMC61_3022 phosphate transport regulator YP_003670189.1 PFAM: phosphate transporter; KEGG: gka:GK2945 low-affinity inorganic phosphate transporter YP_003670190.1 PFAM: BioY protein; KEGG: gka:GK2944 biotin biosynthesis protein YP_003670191.1 KEGG: gka:GK2943 hypothetical protein YP_003670193.1 KEGG: gka:GK2940 hypothetical protein YP_003670194.1 KEGG: gka:GK2939 hypothetical protein YP_003670195.1 KEGG: gyc:GYMC61_3016 hypothetical protein YP_003670196.1 PFAM: citrate transporter; KEGG: gyc:GYMC61_3015 citrate transporter YP_003670197.1 KEGG: gka:GK2935 hypothetical protein YP_003670198.1 KEGG: gyc:GYMC61_3013 exonuclease RNase T and DNA polymerase III; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease YP_003670199.1 KEGG: gyc:GYMC61_3012 hypothetical protein YP_003670200.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: gyc:GYMC61_3011 superoxide dismutase copper/zinc binding protein YP_003670201.1 KEGG: gyc:GYMC61_3010 aminotransferase class I and II; manually curated; PFAM: aminotransferase class I and II YP_003670202.1 PFAM: Domain of unknown function DUF1871; KEGG: gyc:GYMC61_3009 domain of unknown function DUF1871 YP_003670203.1 KEGG: gyc:GYMC61_3008 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003670204.1 PFAM: aminotransferase class I and II; KEGG: gyc:GYMC61_3007 aminotransferase class I and II YP_003670205.1 PFAM: RNA binding S1 domain protein; KEGG: gyc:GYMC61_3006 RNA binding S1 domain protein YP_003670206.1 PFAM: protein of unknown function DUF378; KEGG: gyc:GYMC61_3005 protein of unknown function DUF378 YP_003670207.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gyc:GYMC61_3004 iron-containing alcohol dehydrogenase YP_003670208.1 KEGG: gyc:GYMC61_3003 phosphoglucose isomerase (PGI); PFAM: phosphoglucose isomerase (PGI) YP_003670209.1 PFAM: protein of unknown function YugN-like; KEGG: gka:GK2923 hypothetical protein YP_003670210.1 PFAM: ion transport 2 domain protein ; TrkA-N domain protein; KEGG: gyc:GYMC61_3000 ion transport 2 domain protein YP_003670211.1 KEGG: gyc:GYMC61_2999 small acid-soluble spore protein, H-type; TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein YP_003670212.1 KEGG: gyc:GYMC61_2997 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003670213.1 KEGG: gka:GK2919 hypothetical protein YP_003670215.1 KEGG: gyc:GYMC61_2995 nuclease (SNase domain protein); PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein) YP_003670216.1 KEGG: gyc:GYMC61_2994 primosome, DnaD subunit; TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region YP_003670217.1 PFAM: MgtC/SapB transporter; KEGG: gyc:GYMC61_2993 MgtC/SapB transporter YP_003670218.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gyc:GYMC61_2992 protein of unknown function DUF6 transmembrane YP_003670219.1 KEGG: gka:GK2914 transglutaminase YP_003670220.1 KEGG: gka:GK2903 hypothetical protein YP_003670221.1 KEGG: dvi:Dvir_GJ21171 GJ21171 gene product from transcript GJ21171-RA YP_003670222.1 KEGG: gyc:GYMC61_0549 hypothetical protein YP_003670223.1 PFAM: periplasmic binding protein; KEGG: gyc:GYMC61_0550 periplasmic binding protein YP_003670224.1 PFAM: transporter permease; KEGG: gyc:GYMC61_0551 transporter permease YP_003670225.1 PFAM: transporter permease; KEGG: gyc:GYMC61_0552 transporter permease YP_003670226.1 KEGG: gyc:GYMC61_0553 hypothetical protein YP_003670227.1 KEGG: gyc:GYMC61_0555 hypothetical protein YP_003670228.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: gyc:GYMC61_0556 lysine exporter protein (LysE/YggA) YP_003670229.1 KEGG: gyc:GYMC61_0557 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003670230.1 manually curated; TIGRFAM: glucose-1-phosphate adenylyltransferase; KEGG: gyc:GYMC61_0559 glucose-1-phosphate adenylyltransferase; PFAM: nucleotidyl transferase YP_003670231.1 TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: gyc:GYMC61_0560 glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: nucleotidyl transferase YP_003670232.1 KEGG: gyc:GYMC61_0561 glycogen/starch synthase, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1 YP_003670233.1 KEGG: gyc:GYMC61_0562 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003670234.1 PFAM: protein of unknown function DUF124; KEGG: gka:GK2879 hypothetical protein YP_003670235.1 KEGG: gyc:GYMC61_0565 TraR/DksA family transcriptional regulator; TIGRFAM: sporulation protein, yteA family; PFAM: zinc finger DksA/TraR C4-type YP_003670236.1 KEGG: gyc:GYMC61_0566 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase YP_003670237.1 manually curated; TIGRFAM: isochorismate synthase; KEGG: gyc:GYMC61_0567 isochorismate synthase; PFAM: chorismate binding-like YP_003670238.1 KEGG: gyc:GYMC61_0568 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein YP_003670239.1 PFAM: alpha/beta hydrolase fold; KEGG: gyc:GYMC61_0569 alpha/beta hydrolase YP_003670240.1 KEGG: gyc:GYMC61_0570 naphthoate synthase; TIGRFAM: naphthoate synthase; PFAM: enoyl-CoA hydratase/isomerase YP_003670241.1 KEGG: gyc:GYMC61_0571 O-succinylbenzoate-CoA ligase; TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003670242.1 manually curated; KEGG: gka:GK2871 hypothetical protein YP_003670243.1 PFAM: protein of unknown function DUF1540; KEGG: gyc:GYMC61_0573 protein of unknown function DUF1540 YP_003670244.1 PFAM: Uncharacterised conserved protein UCP020408; KEGG: gyc:GYMC61_0574 uncharacterized conserved protein UCP020408 YP_003670245.1 KEGG: gyc:GYMC61_0575 hypothetical protein YP_003670246.1 KEGG: gyc:GYMC61_0576 hypothetical protein YP_003670247.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: gyc:GYMC61_0577 40-residue YVTN family beta-propeller repeat protein YP_003670248.1 KEGG: gyc:GYMC61_0578 cytochrome bd-type quinol oxidase subunit 2 YP_003670249.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gyc:GYMC61_0579 cytochrome bd ubiquinol oxidase subunit I YP_003670250.1 PFAM: periplasmic solute binding protein; KEGG: gyc:GYMC61_0580 periplasmic solute binding protein YP_003670251.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: gyc:GYMC61_0581 cobalamin synthesis protein P47K YP_003670252.1 PFAM: protein of unknown function DUF37; KEGG: gyc:GYMC61_0582 protein of unknown function DUF37 YP_003670253.1 KEGG: gka:GK2863 S-ribosylhomocysteinase; PFAM: LuxS protein YP_003670254.1 manually curated; KEGG: gka:GK2862 hypothetical protein YP_003670255.1 PFAM: ferritin; KEGG: gka:GK2861 starvation-induced protein controlled by sigma-B (general stress protein 20U) YP_003670256.1 KEGG: gka:GK2860 hypothetical protein; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis YP_003670257.1 KEGG: gyc:GYMC61_0587 hypothetical protein YP_003670258.1 KEGG: gyc:GYMC61_0588 nucleoside triphosphatase YtkD; TIGRFAM: nucleoside triphosphatase YtkD; PFAM: NUDIX hydrolase YP_003670260.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK2857 nitrate/sulfonate/taurine/bicarbonate ABC transporter permease YP_003670261.1 KEGG: gka:GK2856 nitrate/sulfonate/taurine/bicarbonate ABC transporter (ATP binding protein); PFAM: ABC transporter; SMART: ATPase AAA YP_003670262.1 PFAM: NMT1/THI5 like domain protein; KEGG: gka:GK2855 nitrate/sulfonate/taurine/bicarbonate ABC transporter (substrate binding protein) YP_003670263.1 PFAM: BAAT/acyl-CoA thioester hydrolase; KEGG: gyc:GYMC61_0653 BAAT/acyl-CoA thioester hydrolase YP_003670264.1 PFAM: protein of unknown function DUF2584; KEGG: gyc:GYMC61_0654 protein of unknown function DUF2584 YP_003670265.1 KEGG: gyc:GYMC61_2786 hypothetical protein YP_003670266.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2851 hypothetical protein YP_003670267.1 KEGG: gyc:GYMC61_0658 phosphoenolpyruvate carboxykinase (ATP); TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP) YP_003670268.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: gka:GK2849 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003670269.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: gyc:GYMC61_0660 transferase hexapeptide repeat containing protein YP_003670270.1 PFAM: protein of unknown function DUF2600; KEGG: gyc:GYMC61_0661 protein of unknown function DUF2600 YP_003670271.1 PFAM: rRNA methylase; KEGG: gyc:GYMC61_0662 rRNA methylase YP_003670272.1 PFAM: protein of unknown function DUF2524; KEGG: gyc:GYMC61_0663 protein of unknown function DUF2524 YP_003670273.1 KEGG: gyc:GYMC61_0664 hypothetical protein YP_003670274.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_0665 major facilitator superfamily MFS_1 YP_003670275.1 KEGG: gyc:GYMC61_0666 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_003670276.1 KEGG: gyc:GYMC61_0667 rhodanese domain protein; PFAM: rhodanese; SMART: rhodanese YP_003670277.1 KEGG: gyc:GYMC61_0668 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; SMART: helix-turn-helix domain protein; Tetratricopeptide repeat YP_003670278.1 KEGG: gyc:GYMC61_0669 hypothetical protein YP_003670279.1 KEGG: gyc:GYMC61_0670 thermolysin; PFAM: peptidase M4 thermolysin; peptidase M4 thermolysin; propeptide peptidase M4 and M36; propeptide PepSY amd peptidase M4 YP_003670280.1 KEGG: gtn:GTNG_2740 YteV YP_003670281.1 PFAM: HI0933 family protein; KEGG: gka:GK2836 hypothetical protein YP_003670282.1 PFAM: polysaccharide biosynthesis protein; KEGG: gyc:GYMC61_0673 polysaccharide biosynthesis protein YP_003670283.1 KEGG: gyc:GYMC61_0674 hypothetical protein YP_003670284.1 KEGG: gyc:GYMC61_0675 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003670285.1 KEGG: gyc:GYMC61_0676 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003670286.1 KEGG: gyc:GYMC61_0677 dipeptidase; TIGRFAM: dipeptidase; PFAM: peptidase M20 YP_003670287.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_0678 major facilitator superfamily MFS_1 YP_003670288.1 KEGG: gyc:GYMC61_0679 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX YP_003670289.1 KEGG: gyc:GYMC61_0680 hypothetical protein YP_003670290.1 TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: gyc:GYMC61_0681 pullulanase, type I; SMART: alpha amylase catalytic sub domain YP_003670291.1 PFAM: aminoglycoside phosphotransferase; KEGG: gyc:GYMC61_0682 aminoglycoside phosphotransferase YP_003670292.1 KEGG: gyc:GYMC61_0683 hypothetical protein YP_003670293.1 KEGG: gka:GK2823 hypothetical protein; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_003670294.1 KEGG: gyc:GYMC61_0685 beta-lactamase YP_003670295.1 PFAM: propeptide PepSY amd peptidase M4; KEGG: gka:GK2821 hypothetical protein YP_003670296.1 KEGG: gyc:GYMC61_0687 glutamyl aminopeptidase; PFAM: peptidase M42 family protein YP_003670297.1 PFAM: protein of unknown function DUF84; KEGG: gyc:GYMC61_0688 protein of unknown function DUF84 YP_003670298.1 PFAM: protein of unknown function DUF1444; KEGG: gka:GK2818 hypothetical protein YP_003670299.1 PFAM: t-RNA-binding domain protein; KEGG: gka:GK2817 hypothetical protein YP_003670300.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: gyc:GYMC61_0692 cell divisionFtsK/SpoIIIE YP_003670301.1 KEGG: gyc:GYMC61_0693 UDP-N-acetylmuramate/alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003670302.1 PFAM: protein of unknown function DUF948; KEGG: gyc:GYMC61_0694 protein of unknown function DUF948 YP_003670303.1 KEGG: gka:GK2813 hypothetical protein YP_003670304.1 KEGG: gka:GK2812 hypothetical protein YP_003670305.1 KEGG: gyc:GYMC61_0697 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; chorismate mutase; PFAM: DAHP synthetase I/KDSA; chorismate mutase, type II YP_003670306.1 TIGRFAM: catabolite control protein A; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; KEGG: gyc:GYMC61_0698 global transcriptional regulator, catabolite control protein A; SMART: regulatory protein LacI YP_003670308.1 KEGG: gka:GK2809 acetoin utilization protein; PFAM: histone deacetylase superfamily YP_003670309.1 KEGG: gka:GK2808 acetoin utilization protein; PFAM: hypothetical protein; amino acid-binding ACT domain protein; SMART: hypothetical protein YP_003670310.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_0710 acetoin utilization protein YP_003670311.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_0711 AMP-dependent synthetase and ligase YP_003670312.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: gyc:GYMC61_0712 glycosyl transferase family 51 YP_003670313.1 manually curated; KEGG: gyc:GYMC61_0713 hypothetical protein YP_003670314.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: gyc:GYMC61_0714 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_003670315.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gyc:GYMC61_0715 ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_003670316.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gka:GK2801 two-component sensor histidine kinase; SMART: GGDEF domain containing protein YP_003670317.1 KEGG: gyc:GYMC61_0717 GAF sensor protein; PFAM: GAF domain protein; SMART: GAF domain protein YP_003670318.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; KEGG: gyc:GYMC61_0718 histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein YP_003670319.1 PFAM: Septation ring formation regulator EzrA; KEGG: gyc:GYMC61_0719 septation ring formation regulator EzrA YP_003670320.1 PFAM: aminotransferase class V; KEGG: gyc:GYMC61_0720 cysteine desulfurase YP_003670321.1 KEGG: gka:GK2795 thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: thiamine biosynthesis protein-like; THUMP domain protein YP_003670322.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gyc:GYMC61_0722 small acid-soluble spore protein alpha/beta type YP_003670323.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_0723 AMP-dependent synthetase and ligase YP_003670324.1 KEGG: gyc:GYMC61_0725 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_003670325.1 PFAM: RDD domain containing protein; KEGG: gyc:GYMC61_0726 RDD domain containing protein YP_003670326.1 KEGG: gyc:GYMC61_0727 hypothetical protein YP_003670327.1 KEGG: gka:GK2788 hypothetical protein; TIGRFAM: sporulation protein YtfJ; PFAM: sporulation protein YtfJ YP_003670328.1 PFAM: redoxin; KEGG: gka:GK2787 thiol peroxidase (superoxide-inducible protein 8) YP_003670329.1 PFAM: N-6 DNA methylase; KEGG: gyc:GYMC61_0730 N-6 DNA methylase YP_003670330.1 KEGG: gka:GK2785 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_003670331.1 KEGG: gyc:GYMC61_0732 hypothetical protein YP_003670332.1 PFAM: sterol-binding domain protein; KEGG: gka:GK2783 hypothetical protein YP_003670333.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2782 long-chain fatty-acid-CoA ligase YP_003670334.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gka:GK2781 acyl-CoA dehydrogenase YP_003670335.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gka:GK2780 acyl-CoA dehydrogenase YP_003670336.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gka:GK2779 enoyl-CoA hydratase/carnithine racemase YP_003670337.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_0738 short-chain dehydrogenase/reductase SDR YP_003670338.1 KEGG: gyc:GYMC61_0739 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003670339.1 PFAM: ABC transporter; KEGG: gka:GK2776 ABC transporter YP_003670340.1 KEGG: gka:GK2775 hypothetical protein YP_003670341.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gyc:GYMC61_0742 alcohol dehydrogenase zinc-binding domain protein YP_003670342.1 KEGG: gyc:GYMC61_0743 hypothetical protein YP_003670343.1 PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_0744 betaine-aldehyde dehydrogenase YP_003670344.1 PFAM: ribonucleotide reductase; KEGG: gyc:GYMC61_0745 ribonucleotide reductase YP_003670345.1 KEGG: gyc:GYMC61_0746 hypothetical protein YP_003670346.1 KEGG: gyc:GYMC61_0747 hypothetical protein YP_003670347.1 KEGG: gyc:GYMC61_0748 hypothetical protein YP_003670348.1 KEGG: gyc:GYMC61_0749 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003670349.1 KEGG: gyc:GYMC61_0750 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis protein; PFAM: molybdopterin binding domain YP_003670350.1 KEGG: gka:GK2764 L-allo-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003670351.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_0753 major facilitator superfamily MFS_1 YP_003670352.1 PFAM: protein of unknown function DUF201; KEGG: gka:GK2762 hypothetical protein YP_003670353.1 KEGG: gka:GK2761 hypothetical protein YP_003670354.1 KEGG: gyc:GYMC61_0756 transcriptional regulator, ArsR family; PFAM: hypothetical protein; SMART: regulatory protein ArsR YP_003670355.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_0757 AMP-dependent synthetase and ligase YP_003670356.1 KEGG: gyc:GYMC61_0758 hypothetical protein YP_003670357.1 KEGG: gka:GK2758 hypothetical protein YP_003670358.1 TIGRFAM: argininosuccinate synthase; KEGG: gka:GK2757 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003670359.1 KEGG: gyc:GYMC61_0761 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_003670360.1 PFAM: UspA domain protein; KEGG: gyc:GYMC61_0762 UspA domain protein YP_003670361.1 KEGG: gyc:GYMC61_0763 hypothetical protein YP_003670362.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_0764 short-chain dehydrogenase/reductase SDR YP_003670363.1 TIGRFAM: alanine dehydrogenase; KEGG: gyc:GYMC61_0765 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003670364.1 PFAM: peptidase M24; creatinase; KEGG: gka:GK2751 Xaa-Pro dipeptidase YP_003670365.1 KEGG: gyc:GYMC61_0767 beta-lactamase YP_003670366.1 KEGG: gyc:GYMC61_0768 signal transduction protein with CBS and DRTGG domains; PFAM: DRTGG domain protein; regulatory protein GntR HTH; hypothetical protein; thioesterase superfamily protein; SMART: hypothetical protein YP_003670367.1 KEGG: gyc:GYMC61_0769 hypothetical protein YP_003670368.1 KEGG: gyc:GYMC61_0770 phosphoesterase RecJ domain protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_003670369.1 KEGG: gyc:GYMC61_0771 hypothetical protein YP_003670370.1 KEGG: gka:GK2745 hypothetical protein YP_003670371.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, subunit alpha; KEGG: gyc:GYMC61_0773 DNA polymerase III alpha subunit; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_003670372.1 KEGG: gyc:GYMC61_0774 regulatory protein GntR HTH; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003670373.1 KEGG: gyc:GYMC61_0775 acetyl-CoA carboxylase, carboxyl transferase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase subunit beta; PFAM: carboxyl transferase YP_003670374.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; KEGG: gyc:GYMC61_0776 acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; PFAM: acetyl-CoA carboxylase, subunit alpha, conserved region YP_003670375.1 KEGG: gyc:GYMC61_0777 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_003670376.1 KEGG: gyc:GYMC61_0778 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta; PEP-utilising protein mobile region YP_003670377.1 KEGG: gyc:GYMC61_0779 sporulation integral membrane protein YtvI; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118 YP_003670378.1 PFAM: protein of unknown function DUF441; KEGG: gyc:GYMC61_0780 protein of unknown function DUF441 YP_003670379.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: gyc:GYMC61_0781 2-methylcitrate synthase/citrate synthase II; PFAM: citrate synthase YP_003670380.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: gyc:GYMC61_0782 isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003670381.1 TIGRFAM: malate dehydrogenase, NAD-dependent; KEGG: gka:GK2734 malate dehydrogenase; PFAM: lactate/malate dehydrogenase YP_003670382.1 PFAM: MaoC domain protein dehydratase; KEGG: gyc:GYMC61_0784 MaoC domain protein dehydratase YP_003670383.1 KEGG: gyc:GYMC61_0785 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003670384.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; KEGG: gka:GK2731 two-component sensor histidine kinase (phosphate regulation); SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_003670385.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: gyc:GYMC61_0787 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase YP_003670386.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: gka:GK2728 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; zinc finger Fpg domain protein YP_003670387.1 KEGG: gyc:GYMC61_0789 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_003670388.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gyc:GYMC61_0790 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003670389.1 KEGG: gyc:GYMC61_0791 S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related YP_003670390.1 KEGG: gyc:GYMC61_0792 hypothetical protein YP_003670391.1 PFAM: ATP-cone domain protein; KEGG: gyc:GYMC61_0793 ATP-cone domain protein YP_003670392.1 PFAM: replication initiation and membrane attachment family protein; KEGG: gka:GK2722 chromosome replication initiation/membrane attachment protein YP_003670393.1 KEGG: gyc:GYMC61_0795 primosomal DnaI domain protein; PFAM: Primosomal DnaI domain protein; AFG1-family ATPase; SMART: AAA ATPase YP_003670394.1 KEGG: gyc:GYMC61_0796 sporulation protein YtxC; TIGRFAM: sporulation protein YtxC; PFAM: sporulation protein YtxC YP_003670395.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); threonyl/alanyl tRNA synthetase SAD; anticodon-binding domain protein; TGS domain protein; KEGG: gka:GK2719 threonyl-tRNA synthetase; SMART: threonyl/alanyl tRNA synthetase SAD YP_003670396.1 KEGG: gyc:GYMC61_0798 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor 3-like YP_003670397.1 KEGG: gyc:GYMC61_0799 ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35 YP_003670398.1 KEGG: gyc:GYMC61_0800 ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_003670399.1 PFAM: protein of unknown function DUF1294; KEGG: gyc:GYMC61_0801 protein of unknown function DUF1294 YP_003670400.1 PFAM: dUTPase; KEGG: gyc:GYMC61_0802 dUTPase YP_003670401.1 KEGG: gyc:GYMC61_0803 cellulase; PFAM: peptidase M42 family protein YP_003670402.1 KEGG: gyc:GYMC61_0804 hypothetical protein YP_003670403.1 TIGRFAM: small, acid-soluble spore protein I; KEGG: gyc:GYMC61_0805 small, acid-soluble spore protein I YP_003670404.1 KEGG: gyc:GYMC61_0806 nucleotidyltransferase substrate binding protein, HI0074 family; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: nucleotidyltransferase substrate binding protein HI0074; DNA polymerase subunit beta YP_003670405.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: gyc:GYMC61_0807 peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A YP_003670406.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: gka:GK2709 rRNA methylase YP_003670407.1 KEGG: gyc:GYMC61_0809 hypothetical protein YP_003670408.1 KEGG: gyc:GYMC61_0810 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003670409.1 TIGRFAM: phenylalanyl-tRNA synthetase subunit beta; KEGG: gyc:GYMC61_0811 phenylalanyl-tRNA synthetase subunit beta YP_003670410.1 TIGRFAM: excisionase; KEGG: gyc:GYMC61_0812 excisionase YP_003670411.1 KEGG: gyc:GYMC61_0813 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003670412.1 PFAM: Camphor resistance CrcB protein; KEGG: gka:GK2703 hypothetical protein YP_003670413.1 KEGG: gyc:GYMC61_0815 CrcB protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_003670414.1 PFAM: alkaline phosphatase; KEGG: gyc:GYMC61_0816 alkaline phosphatase; SMART: alkaline phosphatase YP_003670415.1 KEGG: gyc:GYMC61_0817 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003670416.1 PFAM: MMPL domain protein; KEGG: gyc:GYMC61_0818 MmpL domain protein YP_003670417.1 PFAM: ThiJ/PfpI domain protein; KEGG: gka:GK2698 hypothetical protein YP_003670418.1 TIGRFAM: ribonuclease HIII; KEGG: gyc:GYMC61_0820 ribonuclease HIII; PFAM: ribonuclease HII/HIII YP_003670419.1 PFAM: protein of unknown function DUF710; KEGG: gyc:GYMC61_0821 protein of unknown function DUF710 YP_003670420.1 PFAM: colicin V production protein; KEGG: gyc:GYMC61_0822 colicin V production protein YP_003670421.1 KEGG: gyc:GYMC61_0823 PHP domain protein; PFAM: PHP domain protein; SMART: DNA polymerase X; DNA-binding protein; phosphoesterase PHP domain protein YP_003670422.1 TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS; KEGG: gyc:GYMC61_0824 MutS2 family protein; SMART: DNA mismatch repair protein MutS; MutS III domain protein; Smr protein/MutS2 YP_003670423.1 PFAM: protein of unknown function DUF350; KEGG: gyc:GYMC61_0825 protein of unknown function DUF350 YP_003670424.1 KEGG: gyc:GYMC61_0826 hypothetical protein YP_003670425.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2690 long chain acyl-CoA synthetase YP_003670426.1 PFAM: Tetracycline transcriptional regulator YsiA domain protein; regulatory protein TetR; KEGG: gyc:GYMC61_0828 transcriptional regulator, TetR family YP_003670427.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_0829 enoyl-CoA hydratase/isomerase YP_003670428.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: gyc:GYMC61_0830 electron transfer flavoprotein alpha/beta-subunit YP_003670429.1 PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: gyc:GYMC61_0831 electron transfer flavoprotein subunit alpha YP_003670430.1 KEGG: gyc:GYMC61_0832 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin domain YP_003670431.1 KEGG: gyc:GYMC61_0833 hypothetical protein YP_003670432.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gyc:GYMC61_0834 NAD-dependent epimerase/dehydratase YP_003670433.1 PFAM: sulfatase; KEGG: gyc:GYMC61_0836 type I phosphodiesterase/nucleotide pyrophosphatase YP_003670434.1 PFAM: glycosyl transferase family 2; KEGG: gyc:GYMC61_0837 glycosyl transferase family 2 YP_003670435.1 KEGG: gyc:GYMC61_0838 hypothetical protein YP_003670436.1 PFAM: iron permease FTR1; KEGG: gyc:GYMC61_0839 iron permease FTR1 YP_003670437.1 KEGG: gyc:GYMC61_0840 hypothetical protein YP_003670438.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: gyc:GYMC61_0841 excinuclease ABC, C subunit; SMART: excinuclease ABC C subunit domain protein YP_003670439.1 PFAM: protein of unknown function DUF2507; KEGG: gyc:GYMC61_0842 protein of unknown function DUF2507 YP_003670440.1 KEGG: gyc:GYMC61_0843 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; PFAM: fumarate reductase respiratory complex YP_003670441.1 TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: gyc:GYMC61_0844 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003670442.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: gyc:GYMC61_0845 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_003670443.1 KEGG: gyc:GYMC61_0846 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003670444.1 KEGG: gyc:GYMC61_0847 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003670445.1 TIGRFAM: glutamate racemase; KEGG: gyc:GYMC61_0848 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003670446.1 PFAM: Lipoprotein LpqB, GerMN domain; KEGG: gyc:GYMC61_0849 lipoprotein LpqB, GerMN domain protein YP_003670447.1 KEGG: efa:EF1122 ribonuclease PH/Ham1 protein; TIGRFAM: ribonuclease PH; non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003670448.1 KEGG: gyc:GYMC61_0852 phosphodiesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase YP_003670449.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: gka:GK2662 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003670450.1 KEGG: gka:GK2661 acetolactate synthase catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding YP_003670451.1 KEGG: gyc:GYMC61_0856 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_003670452.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: gyc:GYMC61_0858 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003670453.1 KEGG: gyc:GYMC61_0859 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003670454.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: gka:GK2657 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003670455.1 KEGG: gyc:GYMC61_0861 3-isopropylmalate dehydratase, large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein YP_003670456.1 KEGG: gyc:GYMC61_0862 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_003670457.1 KEGG: gyc:GYMC61_0863 hypothetical protein YP_003670458.1 KEGG: gyc:GYMC61_0864 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain; peptidylprolyl isomerase FKBP-type; trigger factor domain protein YP_003670459.1 TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpX; PFAM: ATPase AAA; zinc finger C4 domain protein; Clp ATPase-like; KEGG: gyc:GYMC61_0865 ATP-dependent Clp protease ATP-binding subunit ClpX; SMART: ATPase AAA YP_003670460.1 SMART: ATPase AAA; TIGRFAM: ATP-dependent protease LonB; KEGG: gyc:GYMC61_0866 ATP-dependent protease LonB; PFAM: peptidase S16 lon domain protein; ATPase AAA YP_003670461.1 SMART: peptidase S16; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: gyc:GYMC61_0867 ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA central domain protein YP_003670462.1 KEGG: gyc:GYMC61_0868 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003670463.1 KEGG: gyc:GYMC61_0869 hypothetical protein YP_003670464.1 KEGG: gyc:GYMC61_0870 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; shikimate/quinate 5-dehydrogenase YP_003670465.1 PFAM: cytochrome C assembly protein; KEGG: gka:GK2646 negative effector of the concentration of HemA YP_003670466.1 KEGG: gyc:GYMC61_0872 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase YP_003670467.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: gyc:GYMC61_0873 uroporphyrinogen III synthase HEM4 YP_003670468.1 KEGG: gyc:GYMC61_0874 porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase YP_003670469.1 KEGG: gyc:GYMC61_0875 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_003670470.1 TIGRFAM: stage VI sporulation protein D; PFAM: peptidoglycan-binding lysin domain; KEGG: gyc:GYMC61_0876 stage VI sporulation protein D; SMART: peptidoglycan-binding LysM YP_003670471.1 TIGRFAM: spore coat protein YsxE; KEGG: gyc:GYMC61_0877 spore coat protein YsxE YP_003670472.1 KEGG: gyc:GYMC61_0878 hypothetical protein YP_003670473.1 KEGG: gyc:GYMC61_0879 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_003670474.1 KEGG: gyc:GYMC61_0880 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_003670475.1 KEGG: gyc:GYMC61_0881 von Willebrand factor A; PFAM: von Willebrand factor A; hypothetical protein; SMART: von Willebrand factor A; hypothetical protein YP_003670476.1 KEGG: gyc:GYMC61_0882 hypothetical protein YP_003670477.1 KEGG: gyc:GYMC61_0883 hypothetical protein YP_003670478.1 KEGG: gyc:GYMC61_0884 hypothetical protein YP_003670479.1 KEGG: gyc:GYMC61_0885 hypothetical protein YP_003670480.1 PFAM: PRC-barrel domain protein; KEGG: gyc:GYMC61_0886 hypothetical protein YP_003670481.1 KEGG: gyc:GYMC61_0887 hypothetical protein YP_003670482.1 KEGG: gyc:GYMC61_0888 type II secretion system protein E; PFAM: type II secretion system protein E; general secretory system II protein E domain protein; SMART: ATPase AAA YP_003670483.1 SMART: ATPase AAA; manually curated; TIGRFAM: twitching motility protein; KEGG: gyc:GYMC61_0889 twitching motility protein; PFAM: type II secretion system protein E YP_003670484.1 PFAM: type II secretion system F domain; KEGG: gyc:GYMC61_0890 type II secretion system F domain protein YP_003670485.1 KEGG: gyc:GYMC61_0891 type II secretory pathway pseudopilin PulG YP_003670486.1 KEGG: gyc:GYMC61_0892 peptidase A24A domain protein; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_003670487.1 KEGG: gyc:GYMC61_0893 hypothetical protein YP_003670488.1 PFAM: fimbrial assembly family protein; KEGG: gyc:GYMC61_0894 fimbrial assembly family protein YP_003670489.1 KEGG: gyc:GYMC61_0895 hypothetical protein YP_003670490.1 KEGG: gyc:GYMC61_0896 hypothetical protein YP_003670491.1 KEGG: gka:GK2620 hypothetical protein YP_003670492.1 KEGG: gyc:GYMC61_0898 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_003670493.1 KEGG: gyc:GYMC61_0899 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; helix-hairpin-helix motif YP_003670494.1 KEGG: gyc:GYMC61_0900 cell shape determining protein, MreB/Mrl family; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_003670495.1 KEGG: gyc:GYMC61_0901 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_003670496.1 KEGG: gyc:GYMC61_0902 rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD YP_003670497.1 KEGG: gyc:GYMC61_0903 septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: septum formation inhibitor MinC YP_003670498.1 KEGG: gyc:GYMC61_0904 septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase YP_003670499.1 KEGG: gyc:GYMC61_0905 hypothetical protein YP_003670500.1 PFAM: peptidase M23; KEGG: gyc:GYMC61_0906 peptidase M23 YP_003670501.1 PFAM: peptidase M50; KEGG: gyc:GYMC61_0907 peptidase M50 YP_003670502.1 KEGG: gyc:GYMC61_0908 ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_003670503.1 PFAM: protein of unknown function DUF464; KEGG: gyc:GYMC61_0909 protein of unknown function DUF464 YP_003670504.1 KEGG: gyc:GYMC61_0910 ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_003670505.1 KEGG: gyc:GYMC61_0911 stage 0 sporulation protein B (sporulation initiation phosphoprotein) YP_003670506.1 KEGG: gyc:GYMC61_0912 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein YP_003670507.1 PFAM: amino acid-binding ACT domain protein; KEGG: gyc:GYMC61_0913 amino acid-binding ACT domain protein YP_003670508.1 KEGG: gyc:GYMC61_0914 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein YP_003670509.1 PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein; KEGG: gyc:GYMC61_0915 3H domain protein YP_003670510.1 KEGG: gyc:GYMC61_0916 cysteine desulfurase; PFAM: aminotransferase class V YP_003670511.1 KEGG: gka:GK2601 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003670512.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: gyc:GYMC61_0918 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003670513.1 TIGRFAM: quinolinate synthetase complex, subunit alpha; KEGG: gka:GK2599 quinolinate synthetase; PFAM: Quinolinate synthetase A YP_003670514.1 TIGRFAM: spore coat assembly protein SafA; PFAM: peptidoglycan-binding lysin domain; KEGG: gyc:GYMC61_0920 spore coat assembly protein SafA; SMART: peptidoglycan-binding LysM YP_003670515.1 PFAM: aminoglycoside phosphotransferase; KEGG: gyc:GYMC61_0921 aminoglycoside phosphotransferase YP_003670516.1 KEGG: gyc:GYMC61_0922 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase YP_003670517.1 PFAM: sporulation lipoprotein YhcN/YlaJ-like; KEGG: gyc:GYMC61_0923 sporulation lipoprotein YhcN/YlaJ-like protein YP_003670518.1 PFAM: protein of unknown function DUF28; KEGG: gyc:GYMC61_0924 protein of unknown function DUF28 YP_003670519.1 PFAM: Domain of unkown function DUF1901; Bypass-of-forespore C; KEGG: gyc:GYMC61_0925 domain of unknown function DUF1901 YP_003670520.1 KEGG: gka:GK2592 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein YP_003670521.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: gyc:GYMC61_0927 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_003670522.1 KEGG: gka:GK2590 hypothetical protein YP_003670523.1 KEGG: gyc:GYMC61_0929 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_003670524.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: gyc:GYMC61_0930 queuine tRNA-ribosyltransferase; PFAM: queuine/other tRNA-ribosyltransferase YP_003670525.1 KEGG: gyc:GYMC61_0931 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_003670526.1 KEGG: gyc:GYMC61_0932 hypothetical protein YP_003670527.1 KEGG: gyc:GYMC61_0933 stage V sporulation protein B; TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein YP_003670528.1 KEGG: gyc:GYMC61_0934 hypothetical protein YP_003670529.1 KEGG: gka:GK2582 bifunctional preprotein translocase subunit SecD/SecF; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein YP_003670530.1 KEGG: gyc:GYMC61_0936 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003670531.1 KEGG: gyc:GYMC61_0937 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: Single-stranded-DNA-specific exonuclease RecJ-like; phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_003670532.1 KEGG: gyc:GYMC61_0938 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003670533.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: gyc:GYMC61_0939 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein YP_003670534.1 KEGG: gyc:GYMC61_0940 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_003670535.1 KEGG: gyc:GYMC61_0941 hypothetical protein YP_003670536.1 TIGRFAM: peroxiredoxin; KEGG: gyc:GYMC61_0942 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_003670537.1 KEGG: gyc:GYMC61_0943 alkyl hydroperoxide reductase, F subunit; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin YP_003670538.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: gyc:GYMC61_0944 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein YP_003670539.1 KEGG: gyc:GYMC61_0945 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_003670540.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gyc:GYMC61_0946 UBA/ThiF-type NAD/FAD binding protein YP_003670541.1 KEGG: gyc:GYMC61_0947 transcription factor, RsfA family; manually curated; TIGRFAM: transcription factor, RsfA family YP_003670542.1 PFAM: acriflavin resistance protein; KEGG: gyc:GYMC61_0948 acriflavin resistance protein YP_003670543.1 PFAM: regulatory protein TetR; KEGG: gyc:GYMC61_0949 TetR family transcriptional regulator YP_003670544.1 KEGG: gka:GK2567 recombination factor protein RarA; PFAM: ATPase AAA; SMART: ATPase AAA YP_003670545.1 KEGG: gyc:GYMC61_0952 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003670546.1 KEGG: gyc:GYMC61_0953 cysteine desulfurase; PFAM: aminotransferase class V YP_003670547.1 KEGG: gka:GK2563 tRNA-specific 2-thiouridylase MnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like YP_003670548.1 KEGG: gyc:GYMC61_0955 tetratricopeptide TPR_2 repeat protein; PFAM: hypothetical protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat YP_003670549.1 TIGRFAM: helicase, RecD/TraA family; KEGG: gyc:GYMC61_0956 helicase, RecD/TraA family; SMART: ATPase AAA YP_003670550.1 PFAM: PRC-barrel domain protein; KEGG: gyc:GYMC61_0957 PRC-barrel domain protein YP_003670551.1 KEGG: gyc:GYMC61_0958 hypothetical protein YP_003670552.1 KEGG: gyc:GYMC61_0959 hypothetical protein YP_003670553.1 PFAM: protein of unknown function UPF0118; KEGG: gyc:GYMC61_0960 protein of unknown function UPF0118 YP_003670554.1 KEGG: gyc:GYMC61_0961 hypothetical protein YP_003670555.1 KEGG: gyc:GYMC61_0962 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_003670556.1 PFAM: protein of unknown function DUF965; KEGG: gyc:GYMC61_0963 protein of unknown function DUF965 YP_003670557.1 KEGG: gyc:GYMC61_0964 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_003670558.1 PFAM: protein of unknown function DUF1292; KEGG: gyc:GYMC61_0965 protein of unknown function DUF1292 YP_003670559.1 PFAM: aminodeoxychorismate lyase; KEGG: gyc:GYMC61_0966 aminodeoxychorismate lyase YP_003670560.1 PFAM: O-methyltransferase family 3; KEGG: gyc:GYMC61_0967 O-methyltransferase family 3 YP_003670561.1 PFAM: peptidase U32; KEGG: gyc:GYMC61_0968 peptidase U32 YP_003670562.1 PFAM: peptidase U32; KEGG: gyc:GYMC61_0969 peptidase U32 YP_003670563.1 KEGG: gyc:GYMC61_0970 uridine kinase; TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase YP_003670564.1 KEGG: gyc:GYMC61_0972 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein YP_003670565.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: gyc:GYMC61_0973 penicillin-binding protein transpeptidase YP_003670566.1 PFAM: protein of unknown function DUF1510; KEGG: gyc:GYMC61_0974 protein of unknown function DUF1510 YP_003670567.1 PFAM: protein of unknown function DUF2536; KEGG: gyc:GYMC61_0975 protein of unknown function DUF2536 YP_003670568.1 PFAM: methyltransferase type 11; KEGG: gyc:GYMC61_0976 methyltransferase type 11 YP_003670569.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: gyc:GYMC61_0977 adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1 YP_003670570.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gyc:GYMC61_0978 pyridoxal-5'-phosphate-dependent protein beta subunit YP_003670571.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gyc:GYMC61_0979 cystathionine gamma-lyase YP_003670572.1 KEGG: gyc:GYMC61_0980 hypothetical protein YP_003670573.1 KEGG: gyc:GYMC61_0981 hypothetical protein YP_003670574.1 KEGG: gyc:GYMC61_0982 RNA polymerase, sigma 28 subunit, SigK; TIGRFAM: RNA polymerase sigma-K factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_003670575.1 PFAM: sodium:dicarboxylate symporter; KEGG: gyc:GYMC61_0983 sodium:dicarboxylate symporter YP_003670576.1 PFAM: SNARE associated Golgi protein; KEGG: gyc:GYMC61_0984 SNARE associated Golgi protein-related protein YP_003670577.1 KEGG: gyc:GYMC61_0985 sporulation integral membrane protein YtvI; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118 YP_003670578.1 PFAM: OmpA/MotB domain protein; KEGG: gyc:GYMC61_0986 OmpA/MotB domain protein YP_003670579.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: gyc:GYMC61_0987 MotA/TolQ/ExbB proton channel YP_003670580.1 KEGG: gka:GK2529 phosphatidylserine synthase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003670581.1 TIGRFAM: phosphatidylserine decarboxylase; KEGG: gyc:GYMC61_0989 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_003670582.1 PFAM: sporulation inhibitor A; KEGG: gyc:GYMC61_0990 sporulation inhibitor A YP_003670583.1 KEGG: gyc:GYMC61_0991 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; HAD-superfamily hydrolase, subfamily IA, variant 1; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003670584.1 TIGRFAM: ribosome biogenesis GTPase YqeH; KEGG: gyc:GYMC61_0992 ribosome biogenesis GTPase YqeH; PFAM: GTP-binding protein HSR1-related YP_003670585.1 KEGG: gyc:GYMC61_0993 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase YP_003670586.1 PFAM: protein of unknown function UPF0044; KEGG: gyc:GYMC61_0994 protein of unknown function UPF0044 YP_003670587.1 PFAM: cytidylyltransferase; manually curated; KEGG: gka:GK2522 nicotinic acid mononucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein YP_003670588.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: gka:GK2521 hypothetical protein; SMART: metal-dependent phosphohydrolase HD region YP_003670589.1 KEGG: gyc:GYMC61_0997 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_003670590.1 PFAM: methyltransferase type 11; KEGG: gyc:GYMC61_0998 methyltransferase type 11 YP_003670591.1 KEGG: gyc:GYMC61_0999 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003670592.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; KEGG: gyc:GYMC61_1000 competence protein ComEA helix-hairpin-helix repeat protein; SMART: DNA-binding protein YP_003670593.1 KEGG: gka:GK2516 late competence protein (DNA binding and uptake); TIGRFAM: ComE operon protein 2; PFAM: CMP/dCMP deaminase zinc-binding YP_003670594.1 KEGG: gyc:GYMC61_1002 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_003670595.1 KEGG: gyc:GYMC61_1003 hypothetical protein YP_003670596.1 KEGG: gyc:GYMC61_1004 DNA polymerase III delta subunit; TIGRFAM: DNA polymerase III subunit delta; PFAM: DNA polymerase III delta YP_003670597.1 KEGG: gyc:GYMC61_1005 ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_003670598.1 TIGRFAM: spore protease; KEGG: gka:GK2511 germination protease; PFAM: peptidase M63 germination protease YP_003670599.1 KEGG: gyc:GYMC61_1007 stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: stage II sporulation P family protein YP_003670600.1 KEGG: gka:GK2509 hypothetical protein YP_003670601.1 KEGG: gka:GK2508 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_003670602.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; radical SAM protein; KEGG: gyc:GYMC61_1010 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_003670603.1 KEGG: gyc:GYMC61_1011 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: negative regulator of class I heat shock protein YP_003670604.1 PFAM: GrpE protein; KEGG: gyc:GYMC61_1012 GrpE protein YP_003670605.1 KEGG: gyc:GYMC61_1013 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: heat shock protein 70 YP_003670606.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: gyc:GYMC61_1014 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_003670607.1 KEGG: gyc:GYMC61_1015 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_003670608.1 PFAM: protein of unknown function DUF558; KEGG: gka:GK2501 16S ribosomal RNA methyltransferase RsmE YP_003670609.1 TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004 ; radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: gyc:GYMC61_1017 RNA modification enzyme, MiaB family; SMART: Elongator protein 3/MiaB/NifB YP_003670610.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: gyc:GYMC61_1018 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_003670611.1 KEGG: gyc:GYMC61_1019 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter YP_003670612.1 KEGG: gyc:GYMC61_1020 ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_003670613.1 PFAM: protein of unknown function; KEGG: gka:GK2496 hypothetical protein YP_003670614.1 KEGG: gyc:GYMC61_1022 sporulation protein YqfC; TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429 YP_003670615.1 KEGG: gyc:GYMC61_1023 sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD YP_003670616.1 KEGG: gka:GK2493 phosphate starvation-induced protein; PFAM: PhoH family protein; K Homology, type 1, subgroup; SMART: KH domain protein YP_003670617.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; KEGG: gyc:GYMC61_1025 7TM receptor with intracellular metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003670618.1 PFAM: protein of unknown function UPF0054; KEGG: gyc:GYMC61_1026 protein of unknown function UPF0054 YP_003670619.1 PFAM: diacylglycerol kinase; KEGG: gyc:GYMC61_1027 diacylglycerol kinase YP_003670620.1 KEGG: gyc:GYMC61_1028 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding YP_003670621.1 KEGG: gyc:GYMC61_1029 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_003670622.1 KEGG: gyc:GYMC61_1030 hypothetical protein YP_003670623.1 KEGG: gyc:GYMC61_1031 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O RecO YP_003670624.1 KEGG: gyc:GYMC61_1032 hypothetical protein; PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein YP_003670625.1 PFAM: protein of unknown function DUF299; KEGG: gyc:GYMC61_1033 protein of unknown function DUF299 YP_003670626.1 TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; KEGG: gyc:GYMC61_1034 DNA primase; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_003670627.1 KEGG: gyc:GYMC61_0157 RNA polymerase, sigma 70 subunit, RpoD subfamily; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein YP_003670628.1 KEGG: gyc:GYMC61_0158 hypothetical protein YP_003670629.1 PFAM: cytochrome C class I; KEGG: gyc:GYMC61_0159 cytochrome C class I YP_003670630.1 PFAM: protein of unknown function DUF633; KEGG: gyc:GYMC61_0160 protein of unknown function DUF633 YP_003670631.1 PFAM: protein of unknown function DUF34; KEGG: gka:GK2478 hypothetical protein YP_003670632.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: gyc:GYMC61_0162 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_003670633.1 KEGG: gka:GK2476 hypothetical protein YP_003670634.1 KEGG: gyc:GYMC61_0164 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase YP_003670635.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: gyc:GYMC61_0165 apurinic endonuclease Apn1; PFAM: xylose isomerase YP_003670636.1 KEGG: gyc:GYMC61_0166 hypothetical protein YP_003670637.1 PFAM: protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: gyc:GYMC61_0167 protein of unknown function DUF2179 YP_003670638.1 KEGG: gyc:GYMC61_0168 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003670639.1 PFAM: ABC transporter; KEGG: gyc:GYMC61_0169 ABC transporter YP_003670640.1 PFAM: ferric-uptake regulator; KEGG: gka:GK2469 FUR family transcriptional regulator YP_003670641.1 KEGG: gka:GK2468 hypothetical protein YP_003670642.1 KEGG: gyc:GYMC61_0172 hypothetical protein YP_003670643.1 KEGG: gyc:GYMC61_0173 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_003670644.1 KEGG: gyc:GYMC61_0174 hypothetical protein YP_003670645.1 KEGG: gyc:GYMC61_0175 phosphate binding protein; TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1 YP_003670646.1 KEGG: gyc:GYMC61_0176 phosphate ABC transporter inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component YP_003670647.1 KEGG: gyc:GYMC61_0177 phosphate ABC transporter inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component YP_003670648.1 PFAM: protein of unknown function DUF1189; KEGG: gyc:GYMC61_0178 protein of unknown function DUF1189 YP_003670649.1 KEGG: gka:GK2458 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003670650.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: gyc:GYMC61_0179 superoxide dismutase YP_003670651.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2456 hypothetical protein YP_003670652.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: gyc:GYMC61_0183 penicillin-binding protein transpeptidase YP_003670653.1 TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter; KEGG: gyc:GYMC61_0184 phosphate ABC transporter ATPase; SMART: ATPase AAA YP_003670654.1 PFAM: aminodeoxychorismate lyase; KEGG: gyc:GYMC61_0185 hypothetical protein YP_003670655.1 KEGG: gka:GK2452 hypothetical protein YP_003670656.1 KEGG: gyc:GYMC61_0187 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_003670657.1 KEGG: gyc:GYMC61_0188 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_003670658.1 PFAM: protein of unknown function DUF92 transmembrane; KEGG: gyc:GYMC61_0189 protein of unknown function DUF92 transmembrane YP_003670659.1 KEGG: gyc:GYMC61_0190 hypothetical protein YP_003670660.1 PFAM: rhomboid family protein; KEGG: gyc:GYMC61_0191 rhomboid family protein YP_003670661.1 KEGG: gyc:GYMC61_0192 hypothetical protein YP_003670662.1 PFAM: GerA spore germination protein; KEGG: gyc:GYMC61_0193 GerA spore germination protein YP_003670663.1 PFAM: protein of unknown function DUF910; KEGG: gka:GK2443 hypothetical protein YP_003670664.1 KEGG: gka:GK2442 glucokinase; TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein YP_003670665.1 KEGG: gyc:GYMC61_0196 peptidase M14 carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A YP_003670666.1 KEGG: gyc:GYMC61_0197 hypothetical protein YP_003670667.1 KEGG: gyc:GYMC61_0198 beta-lactamase YP_003670668.1 PFAM: protein of unknown function DUF185; KEGG: gyc:GYMC61_0199 protein of unknown function DUF185 YP_003670669.1 KEGG: gyc:GYMC61_0200 hypothetical protein YP_003670670.1 SMART: regulatory protein ArsR; KEGG: gyc:GYMC61_0201 transcriptional regulator YP_003670671.1 KEGG: gyc:GYMC61_0204 type II secretion system protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA YP_003670672.1 PFAM: type II secretion system F domain; KEGG: gyc:GYMC61_0205 type II secretion system F domain protein YP_003670673.1 KEGG: gyc:GYMC61_0206 DNA transport machinery (exogenous DNA-binding protein) YP_003670674.1 KEGG: gyc:GYMC61_0207 hypothetical protein YP_003670675.1 KEGG: gyc:GYMC61_0208 hypothetical protein YP_003670676.1 KEGG: gyc:GYMC61_0209 hypothetical protein YP_003670677.1 KEGG: gyc:GYMC61_0210 hypothetical protein YP_003670678.1 KEGG: gyc:GYMC61_0211 hypothetical protein YP_003670679.1 KEGG: gyc:GYMC61_0212 hypothetical protein YP_003670680.1 KEGG: gka:GK2426 DNA/RNA helicase; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase ; helicase domain protein YP_003670681.1 KEGG: gyc:GYMC61_0214 glycine cleavage system T protein; TIGRFAM: glycine cleavage system protein T; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel YP_003670682.1 KEGG: gka:GK2424 glycine dehydrogenase subunit 1; PFAM: glycine cleavage system P-protein-like YP_003670683.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gyc:GYMC61_0216 glycine dehydrogenase (decarboxylating) YP_003670684.1 PFAM: aldo/keto reductase; KEGG: gtn:GTNG_2361 oxidoreductase protein YP_003670685.1 PFAM: ROK family protein; KEGG: gyc:GYMC61_0217 ROK family protein YP_003670686.1 KEGG: gyc:GYMC61_0218 rhodanese domain protein; PFAM: rhodanese; SMART: rhodanese YP_003670687.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: gyc:GYMC61_0219 biotin/lipoate A/B protein ligase YP_003670688.1 KEGG: gka:GK2419 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase large subunit domain protein YP_003670689.1 KEGG: gyc:GYMC61_0223 peptidoglycan-binding lysin domain protein; PFAM: peptidoglycan-binding lysin domain; glycoside hydrolase family 18; SMART: peptidoglycan-binding LysM; chitinase II YP_003670690.1 KEGG: gyc:GYMC61_0224 hypothetical protein YP_003670691.1 KEGG: gyc:GYMC61_0226 spore photoproduct lyase; TIGRFAM: spore photoproduct lyase; PFAM: radical SAM protein YP_003670692.1 KEGG: gyc:GYMC61_0227 iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_003670693.1 PFAM: patatin; KEGG: gyc:GYMC61_0228 patatin YP_003670694.1 KEGG: gyc:GYMC61_0229 hypothetical protein YP_003670695.1 PFAM: protein of unknown function DUF1385; KEGG: gyc:GYMC61_0230 protein of unknown function DUF1385 YP_003670696.1 KEGG: gyc:GYMC61_0231 hypothetical protein YP_003670697.1 PFAM: peptidase M24; creatinase; KEGG: gyc:GYMC61_0232 peptidase M24 YP_003670698.1 KEGG: gyc:GYMC61_0233 translation elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor KOW domain protein; Elongation factor P/YeiP protein; Elongation factor P YP_003670699.1 KEGG: gka:GK2409 hypothetical protein YP_003670700.1 KEGG: gka:GK2408 stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA; SMART: ATPase AAA YP_003670701.1 KEGG: gka:GK2407 stage III sporulation protein SpoAB; TIGRFAM: stage III sporulation protein AB; PFAM: sporulation stage III protein AB YP_003670702.1 KEGG: gyc:GYMC61_0237 stage III sporulation protein AC; TIGRFAM: stage III sporulation protein AC; PFAM: stage III sporulation AC family protein YP_003670703.1 KEGG: gyc:GYMC61_0238 stage III sporulation protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: sporulation stage III protein AD YP_003670704.1 KEGG: gyc:GYMC61_0239 stage III sporulation protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: sporulation stage III protein AE YP_003670705.1 KEGG: gyc:GYMC61_0240 stage III sporulation protein AF; TIGRFAM: stage III sporulation protein AF; PFAM: sporulation stage III protein AF YP_003670706.1 TIGRFAM: stage III sporulation protein AG; KEGG: gyc:GYMC61_0241 stage III sporulation protein AG YP_003670707.1 KEGG: gyc:GYMC61_0242 stage III sporulation protein AH YP_003670708.1 KEGG: gyc:GYMC61_0243 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_003670709.1 KEGG: gyc:GYMC61_0244 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_003670710.1 PFAM: protein of unknown function DUF322; KEGG: gyc:GYMC61_0245 protein of unknown function DUF322 YP_003670711.1 KEGG: gka:GK2397 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_003670712.1 KEGG: gka:GK2396 methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_003670713.1 KEGG: gka:GK2395 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_003670714.1 KEGG: gyc:GYMC61_0249 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit YP_003670715.1 PFAM: polyprenyl synthetase; KEGG: gyc:GYMC61_0250 polyprenyl synthetase YP_003670716.1 KEGG: gyc:GYMC61_0251 deoxyxylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase YP_003670717.1 TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: gyc:GYMC61_0252 hemolysin A; SMART: RNA-binding S4 domain protein YP_003670718.1 KEGG: gyc:GYMC61_0253 arginine repressor, ArgR; TIGRFAM: arginine repressor; PFAM: arginine repressor YP_003670719.1 KEGG: gka:GK2389 DNA repair protein (recombination protein N); TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_003670720.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: stage IV sporulation protein B; KEGG: gyc:GYMC61_0255 stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein YP_003670721.1 TIGRFAM: sporulation transcription factor Spo0A; PFAM: sporulation initiation factor Spo0A ; response regulator receiver; KEGG: gyc:GYMC61_0256 sporulation transcriptional activator Spo0A; SMART: response regulator receiver YP_003670722.1 KEGG: gyc:GYMC61_0257 hypothetical protein YP_003670723.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: gyc:GYMC61_0258 glycerophosphoryl diester phosphodiesterase YP_003670724.1 KEGG: gyc:GYMC61_0259 hypothetical protein YP_003670725.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: gyc:GYMC61_0260 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: ATPase AAA; PAS domain containing protein YP_003670726.1 KEGG: gyc:GYMC61_0261 phosphate butyryltransferase; TIGRFAM: phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase YP_003670727.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gyc:GYMC61_0262 Glu/Leu/Phe/Val dehydrogenase YP_003670728.1 KEGG: gyc:GYMC61_0263 butyrate kinase; TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase YP_003670729.1 KEGG: gyc:GYMC61_0264 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003670730.1 KEGG: gyc:GYMC61_0265 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); PFAM: dehydrogenase E1 component YP_003670731.1 PFAM: transketolase; transketolase domain protein; KEGG: gyc:GYMC61_0266 transketolase YP_003670732.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gyc:GYMC61_0267 catalytic domain of components of various dehydrogenase complexes YP_003670733.1 KEGG: gyc:GYMC61_0269 hypothetical protein YP_003670734.1 KEGG: gyc:GYMC61_0270 hypothetical protein YP_003670735.1 KEGG: gyc:GYMC61_0273 hypothetical protein YP_003670736.1 KEGG: gka:GK2374 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003670737.1 KEGG: gyc:GYMC61_0275 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003670738.1 PFAM: protein of unknown function DUF820; KEGG: gyc:GYMC61_0276 protein of unknown function DUF820 YP_003670739.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: gyc:GYMC61_0278 methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase YP_003670740.1 KEGG: gyc:GYMC61_0279 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_003670741.1 KEGG: gyc:GYMC61_0280 LAO/AO transporter ATPase; TIGRFAM: LAO/AO transporter ATPase; PFAM: ArgK protein YP_003670742.1 PFAM: protein of unknown function DUF1094; KEGG: gka:GK2368 hypothetical protein YP_003670743.1 KEGG: bcq:BCQ_0517 hypothetical protein YP_003670744.1 PFAM: HIRAN; KEGG: gyc:GYMC61_0283 HIRAN YP_003670745.1 PFAM: DNA polymerase subunit beta; KEGG: gyc:GYMC61_0295 DNA polymerase subunit beta YP_003670746.1 KEGG: gyc:GYMC61_0296 hypothetical protein YP_003670747.1 KEGG: gyc:GYMC61_0297 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003670748.1 KEGG: gka:GK2362 hypothetical protein YP_003670749.1 KEGG: gka:GK2361 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003670750.1 KEGG: gka:GK2360 hypothetical protein YP_003670751.1 KEGG: gyc:GYMC61_2980 hypothetical protein YP_003670752.1 KEGG: gyc:GYMC61_2979 hypothetical protein YP_003670753.1 KEGG: gyc:GYMC61_2978 hypothetical protein YP_003670754.1 PFAM: protein of unknown function DUF939; KEGG: gyc:GYMC61_0303 protein of unknown function DUF939 YP_003670755.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: gyc:GYMC61_0304 ErfK/YbiS/YcfS/YnhG family protein YP_003670756.1 KEGG: gyc:GYMC61_0306 methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003670757.1 PFAM: carboxyl transferase; KEGG: gyc:GYMC61_0307 carboxyl transferase YP_003670758.1 KEGG: bca:BCE_A0166 radical SAM domain-containing protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003670759.1 manually curated; KEGG: bcu:BCAH820_B0291 carboxymuconolactone decarboxylase family YP_003670760.1 PFAM: protein of unknown function DUF201; KEGG: aac:Aaci_2987 phosphoribosylglycinamide synthetase YP_003670761.1 PFAM: cobalamin synthesis protein P47K; KEGG: bcu:BCAH820_B0298 cobalamin synthesis protein/P47K family protein YP_003670762.1 KEGG: gyc:GYMC61_0320 hypothetical protein YP_003670763.1 KEGG: gka:GK2347 tripeptidase; TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003670764.1 KEGG: gka:GK2346 chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_003670765.1 KEGG: gyc:GYMC61_0325 hypothetical protein YP_003670766.1 KEGG: gka:GK2344 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding YP_003670767.1 KEGG: gyc:GYMC61_0341 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003670768.1 KEGG: gyc:GYMC61_0342 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003670769.1 KEGG: gyc:GYMC61_0343 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003670770.1 KEGG: gyc:GYMC61_0345 6-phospho-beta-glucosidase; PFAM: glycoside hydrolase family 1 YP_003670771.1 KEGG: gka:GK2336 hypothetical protein; TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein YP_003670772.1 KEGG: gka:GK2335 hypothetical protein; PFAM: cyclase family protein YP_003670773.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: gyc:GYMC61_0348 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003670774.1 TIGRFAM: ribonuclease Z; KEGG: gyc:GYMC61_0349 ribonuclease Z YP_003670775.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gka:GK2332 NADPH dehydrogenase NamA YP_003670776.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: gyc:GYMC61_0351 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003670777.1 KEGG: gyc:GYMC61_0352 beta-lactamase YP_003670778.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_0353 short-chain dehydrogenase/reductase SDR YP_003670779.1 KEGG: gyc:GYMC61_0354 hypothetical protein YP_003670780.1 KEGG: gyc:GYMC61_0355 iron sulphur domain-containing, CDGSH-type; PFAM: Iron sulphur domain-containing, CDGSH-type; SMART: zinc finger CDGSH-type domain protein YP_003670781.1 KEGG: gyc:GYMC61_0356 HesB/YadR/YfhF-family protein YP_003670782.1 KEGG: gyc:GYMC61_0357 hypothetical protein YP_003670783.1 KEGG: gyc:GYMC61_0358 hypothetical protein YP_003670784.1 KEGG: gyc:GYMC61_0359 hypothetical protein YP_003670785.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_0360 major facilitator superfamily MFS_1 YP_003670786.1 PFAM: aldo/keto reductase; KEGG: gyc:GYMC61_0361 aldo/keto reductase YP_003670787.1 PFAM: NUDIX hydrolase; KEGG: gyc:GYMC61_0362 NUDIX hydrolase YP_003670788.1 KEGG: gyc:GYMC61_0363 hypothetical protein YP_003670789.1 KEGG: gka:GK2318 stage II sporulation protein M; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane YP_003670790.1 PFAM: ferric-uptake regulator; KEGG: gyc:GYMC61_0365 Fur family ferric uptake regulator YP_003670791.1 KEGG: gyc:GYMC61_0366 hypothetical protein YP_003670792.1 KEGG: gyc:GYMC61_0367 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase; integrase domain protein SAM domain protein YP_003670793.1 TIGRFAM: phosphopentomutase; KEGG: gyc:GYMC61_0368 phosphopentomutase; PFAM: phosphopentomutase domain protein; metalloenzyme domain protein YP_003670794.1 KEGG: gka:GK2313 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1 YP_003670795.1 KEGG: gyc:GYMC61_0370 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain YP_003670796.1 KEGG: gyc:GYMC61_0371 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_003670797.1 KEGG: gyc:GYMC61_0372 anti-sigma-factor antagonist; TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS YP_003670798.1 SMART: ATP-binding region ATPase domain protein; TIGRFAM: anti-sigma F factor; KEGG: gyc:GYMC61_0373 anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein YP_003670799.1 KEGG: gyc:GYMC61_0374 RNA polymerase, sigma 28 subunit, SigF; TIGRFAM: RNA polymerase sigma-F factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_003670800.1 KEGG: gka:GK2307 stage V sporulation protein AA YP_003670801.1 KEGG: gka:GK2306 stage V sporulation protein AB YP_003670802.1 PFAM: SpoVA protein; KEGG: gyc:GYMC61_0377 SpoVA protein YP_003670803.1 KEGG: gyc:GYMC61_0378 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: stage V sporulation AD family protein YP_003670804.1 PFAM: SpoVA protein; KEGG: gyc:GYMC61_0379 SpoVA protein YP_003670805.1 KEGG: gyc:GYMC61_0380 stage V sporulation protein AE YP_003670806.1 PFAM: GerA spore germination protein; KEGG: gyc:GYMC61_0381 GerA spore germination protein YP_003670807.1 KEGG: gyc:GYMC61_0382 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_003670808.1 PFAM: protein of unknown function DUF1002; KEGG: gka:GK2299 hypothetical protein YP_003670809.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: gyc:GYMC61_0384 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_003670810.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: gka:GK2297 riboflavin-specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase ); PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_003670811.1 TIGRFAM: riboflavin synthase, subunit alpha; KEGG: gyc:GYMC61_0386 riboflavin synthase, subunit alpha; PFAM: Lumazine-binding protein YP_003670812.1 KEGG: gka:GK2295 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; 34-dihydroxy-2-butanone 4-phosphate synthase YP_003670813.1 KEGG: gyc:GYMC61_0388 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003670814.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_0389 GCN5-related N-acetyltransferase YP_003670815.1 PFAM: protein of unknown function DUF309; KEGG: gyc:GYMC61_0390 protein of unknown function DUF309 YP_003670816.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: gyc:GYMC61_0391 chromosome segregation and condensation protein ScpA YP_003670817.1 KEGG: gyc:GYMC61_0392 chromosome segregation and condensation protein, ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_003670818.1 KEGG: gyc:GYMC61_0393 hypothetical protein YP_003670819.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: gyc:GYMC61_0394 superoxide dismutase YP_003670820.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: gyc:GYMC61_0395 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_003670821.1 PFAM: nucleoside recognition domain protein; KEGG: gka:GK2285 spore maturation protein YP_003670822.1 PFAM: nucleoside recognition domain protein; KEGG: gyc:GYMC61_0397 nucleoside recognition domain protein YP_003670823.1 KEGG: gyc:GYMC61_0398 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003670824.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: gka:GK2282 thiol-disulfide oxidoreductase YP_003670825.1 PFAM: ResB family protein; KEGG: gyc:GYMC61_0400 ResB family protein YP_003670826.1 KEGG: gyc:GYMC61_0401 cytochrome C biogenesis protein CcsB; TIGRFAM: cytochrome C biogenesis protein CcsB; PFAM: cytochrome C assembly protein YP_003670827.1 KEGG: gyc:GYMC61_0402 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003670828.1 KEGG: gka:GK2278 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003670829.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: gyc:GYMC61_0404 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003670830.1 KEGG: gyc:GYMC61_0405 glucosamine-6-phosphate isomerase; TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase YP_003670831.1 KEGG: gka:GK2275 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003670832.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; KEGG: gyc:GYMC61_0407 PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site YP_003670833.1 KEGG: gyc:GYMC61_0408 hypothetical protein YP_003670834.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gka:GK3301 transposase YP_003670835.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: gyc:GYMC61_0409 signal transduction histidine kinase, LytS YP_003670836.1 KEGG: gyc:GYMC61_0410 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver YP_003670837.1 KEGG: gyc:GYMC61_0411 hypothetical protein YP_003670838.1 PFAM: acetamidase/Formamidase; KEGG: gyc:GYMC61_0412 acetamidase/formamidase YP_003670839.1 PFAM: amino acid permease-associated region; KEGG: gka:GK2269 amino acid transporter YP_003670840.1 PFAM: protein of unknown function DUF1696; KEGG: gyc:GYMC61_0414 protein of unknown function DUF1696 YP_003670841.1 PFAM: NUDIX hydrolase; KEGG: gyc:GYMC61_0415 NUDIX hydrolase YP_003670842.1 PFAM: periplasmic binding protein; KEGG: gyc:GYMC61_0416 periplasmic binding protein YP_003670843.1 KEGG: gka:GK2265 ferric ion ABC transporter permease; manually curated; PFAM: transporter permease YP_003670844.1 KEGG: gyc:GYMC61_0418 protein of unknown function DUF105; PFAM: protein of unknown function DUF105; ABC transporter related; SMART: ATPase AAA YP_003670845.1 KEGG: gyc:GYMC61_0419 cobalamin biosynthesis protein CobD; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_003670846.1 KEGG: gyc:GYMC61_0420 L-threonine-O-3-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II YP_003670847.1 PFAM: cobalbumin biosynthesis protein; KEGG: gyc:GYMC61_0421 cobalbumin biosynthesis protein YP_003670848.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: gyc:GYMC61_0422 cobalamin-5-phosphate synthase CobS YP_003670849.1 PFAM: phosphoglycerate mutase; KEGG: gyc:GYMC61_0423 phosphoglycerate mutase YP_003670850.1 KEGG: gyc:GYMC61_0424 hypothetical protein YP_003670851.1 TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: gyc:GYMC61_0425 ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_003670852.1 KEGG: gka:GK2256 hypothetical protein YP_003670853.1 KEGG: gyc:GYMC61_0427 hypothetical protein YP_003670854.1 KEGG: gyc:GYMC61_0428 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003670855.1 KEGG: gyc:GYMC61_0429 negative regulator of sigma-X activity YP_003670856.1 KEGG: gyc:GYMC61_0430 hypothetical protein YP_003670857.1 KEGG: gyc:GYMC61_0431 histidinol phosphate phosphatase HisJ family; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein YP_003670858.1 TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: gyc:GYMC61_0432 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein YP_003670859.1 KEGG: gyc:GYMC61_0433 inorganic diphosphatase; PFAM: inorganic pyrophosphatase YP_003670860.1 KEGG: gyc:GYMC61_0434 ferredoxin (4Fe-4S) YP_003670861.1 KEGG: gyc:GYMC61_0435 hypothetical protein YP_003670862.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase; helicase; KEGG: gka:GK2243 ATP-dependent DNA helicase; SMART: DEAD-like helicase ; helicase domain protein YP_003670863.1 PFAM: hypothetical protein; KEGG: gyc:GYMC61_0437 abortive infection protein YP_003670864.1 KEGG: gyc:GYMC61_0438 peptidoglycan-binding lysin domain protein; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003670865.1 KEGG: gyc:GYMC61_0439 hypothetical protein YP_003670866.1 KEGG: gyc:GYMC61_0440 catalase; PFAM: manganese containing catalase YP_003670867.1 KEGG: gyc:GYMC61_0441 CotJB protein YP_003670868.1 KEGG: gyc:GYMC61_0442 CotJA protein YP_003670869.1 PFAM: negative regulator of genetic competence; KEGG: gyc:GYMC61_0444 negative regulator of genetic competence YP_003670870.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gyc:GYMC61_0445 Glu/Leu/Phe/Val dehydrogenase YP_003670871.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gyc:GYMC61_0446 HI0933 family protein YP_003670872.1 PFAM: asparaginase/glutaminase; KEGG: gyc:GYMC61_0447 asparaginase/glutaminase YP_003670873.1 KEGG: gyc:GYMC61_0448 hypothetical protein YP_003670874.1 KEGG: gyc:GYMC61_0449 spore cortex-lytic enzyme; TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; peptidoglycan-binding protein YP_003670875.1 KEGG: gka:GK2230 sporulation protein; TIGRFAM: germination protein YpeB; PFAM: propeptide PepSY amd peptidase M4 YP_003670876.1 PFAM: type IV pilus assembly PilZ; KEGG: gyc:GYMC61_0451 type IV pilus assembly PilZ YP_003670877.1 KEGG: gyc:GYMC61_0452 hypothetical protein YP_003670878.1 KEGG: gyc:GYMC61_0453 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_003670879.1 KEGG: gyc:GYMC61_0454 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003670880.1 PFAM: RNA binding S1 domain protein; KEGG: gyc:GYMC61_0455 RNA binding S1 domain protein YP_003670881.1 KEGG: gyc:GYMC61_0456 hypothetical protein YP_003670882.1 KEGG: gka:GK2224 hypothetical protein YP_003670883.1 KEGG: gka:GK2223 hypothetical protein YP_003670884.1 KEGG: gyc:GYMC61_0459 hypothetical protein YP_003670885.1 KEGG: gyc:GYMC61_0460 ribosome-associated GTPase EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003670886.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: gyc:GYMC61_0461 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_003670887.1 KEGG: gyc:GYMC61_0462 hypothetical protein YP_003670888.1 KEGG: gyc:GYMC61_0463 hypothetical protein YP_003670889.1 KEGG: gyc:GYMC61_0464 stage IV sporulation protein A; TIGRFAM: stage IV sporulation protein A; PFAM: sporulation stage IV protein A YP_003670890.1 KEGG: gyc:GYMC61_0465 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003670891.1 TIGRFAM: GTP cyclohydrolase I; KEGG: gyc:GYMC61_0466 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_003670892.1 PFAM: tryptophan RNA-binding attenuator protein; KEGG: gyc:GYMC61_0467 tryptophan RNA-binding attenuator protein YP_003670893.1 KEGG: gyc:GYMC61_0468 trans-hexaprenyltranstransferase; PFAM: Heptaprenyl diphosphate synthase subunit 1 YP_003670894.1 KEGG: gyc:GYMC61_0469 2-heptaprenyl-1,4-naphthoquinone methyltransferase; TIGRFAM: 2-heptaprenyl-1,4-naphthoquinone methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_003670895.1 KEGG: gka:GK2210 heptaprenyl diphosphate synthasecomponent II (spore germination protein C3); TIGRFAM: heptaprenyl diphosphate synthase component II; PFAM: polyprenyl synthetase YP_003670896.1 PFAM: nucleoside diphosphate kinase; KEGG: gyc:GYMC61_0471 nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003670897.1 PFAM: MCP methyltransferase CheR-type; KEGG: gyc:GYMC61_0472 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_003670898.1 TIGRFAM: chorismate synthase; KEGG: gyc:GYMC61_0473 chorismate synthase; PFAM: chorismate synthase YP_003670899.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: gyc:GYMC61_0474 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003670900.1 TIGRFAM: chorismate mutase; KEGG: gyc:GYMC61_0475 chorismate mutase; PFAM: chorismate mutase of the AroH class YP_003670901.1 TIGRFAM: anthranilate synthase component I; KEGG: gka:GK2204 anthranilate synthase component I; PFAM: chorismate binding-like; anthranilate synthase component I domain protein YP_003670902.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: gyc:GYMC61_0477 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_003670903.1 KEGG: gyc:GYMC61_0478 indole-3-glycerol-phosphate synthase; PFAM: indole-3-glycerol phosphate synthase YP_003670904.1 KEGG: gyc:GYMC61_0479 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_003670905.1 KEGG: gyc:GYMC61_0480 tryptophan synthase, beta subunit; TIGRFAM: tryptophan synthase subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003670906.1 TIGRFAM: tryptophan synthase, subunit alpha; KEGG: gyc:GYMC61_0481 tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain YP_003670907.1 KEGG: gyc:GYMC61_0482 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003670908.1 KEGG: gka:GK2197 prephenate dehydrogenase; PFAM: prephenate dehydrogenase; amino acid-binding ACT domain protein YP_003670909.1 KEGG: gyc:GYMC61_0484 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003670910.1 PFAM: hypothetical protein; KEGG: gyc:GYMC61_0485 hypothetical protein YP_003670911.1 PFAM: protein of unknown function UPF0302 ; conserved hypothetical protein; KEGG: gyc:GYMC61_0486 protein of unknown function UPF0302 YP_003670912.1 PFAM: protein of unknown function DUF2487; KEGG: gyc:GYMC61_0487 protein of unknown function DUF2487 YP_003670913.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: gyc:GYMC61_0488 Rieske (2Fe-2S) iron-sulphur domain protein YP_003670914.1 PFAM: cytochrome b/b6 domain; KEGG: gyc:GYMC61_0489 cytochrome b/b6 domain protein YP_003670915.1 PFAM: cytochrome C class I; cytochrome b/b6 domain; KEGG: gyc:GYMC61_0490 cytochrome C class I YP_003670916.1 PFAM: protein of unknown function DUF1405; KEGG: gyc:GYMC61_0491 protein of unknown function DUF1405 YP_003670917.1 KEGG: gyc:GYMC61_0492 sporulation protein YpjB; TIGRFAM: sporulation protein YpjB; PFAM: sporulation protein YpjB YP_003670918.1 PFAM: protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: gyc:GYMC61_0493 protein of unknown function DUF2179 YP_003670919.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: gyc:GYMC61_0494 MazG nucleotide pyrophosphohydrolase YP_003670920.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: gyc:GYMC61_0495 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003670921.1 TIGRFAM: methylglyoxal synthase; KEGG: gyc:GYMC61_0496 methylglyoxal synthase; PFAM: MGS domain protein YP_003670922.1 PFAM: LmbE family protein; KEGG: gyc:GYMC61_0497 LmbE family protein YP_003670923.1 PFAM: glycosyl transferase group 1; KEGG: gyc:GYMC61_0498 glycosyl transferase group 1 YP_003670924.1 PFAM: polynucleotide adenylyltransferase region; KEGG: gyc:GYMC61_0499 polynucleotide adenylyltransferase region YP_003670925.1 KEGG: gyc:GYMC61_0500 bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; biotin operon repressor; PFAM: biotin/lipoate A/B protein ligase; hypothetical protein; biotin protein ligase domain protein YP_003670926.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: gka:GK2179 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003670927.1 KEGG: gka:GK2178 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_003670928.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: gyc:GYMC61_0503 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_003670929.1 SMART: exonuclease; DEAD-like helicase ; helicase c2; TIGRFAM: DnaQ family exonuclease/DinG family helicase; DNA polymerase III subunit epsilon; KEGG: gyc:GYMC61_0504 DnaQ family exonuclease/DinG family helicase; PFAM: exonuclease RNase T and DNA polymerase III YP_003670930.1 KEGG: gtn:GTNG_2109 hypothetical protein YP_003670931.1 PFAM: propeptide PepSY amd peptidase M4; KEGG: gyc:GYMC61_0506 propeptide PepSY amd peptidase M4 YP_003670932.1 PFAM: aminotransferase class I and II; KEGG: gyc:GYMC61_0507 aminotransferase class I and II YP_003670933.1 KEGG: gka:GK2171 asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_003670934.1 KEGG: gyc:GYMC61_0509 primosome, DnaD subunit; TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region YP_003670935.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: gyc:GYMC61_0510 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_003670936.1 KEGG: gyc:GYMC61_0511 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein YP_003670937.1 KEGG: gyc:GYMC61_0512 recombination protein U; TIGRFAM: recombination protein U; PFAM: recombination protein U YP_003670938.1 KEGG: gyc:GYMC61_0513 hypothetical protein YP_003670939.1 PFAM: Domain of unknown function DUF1798; KEGG: gyc:GYMC61_0514 domain of unknown function DUF1798 YP_003670940.1 KEGG: gyc:GYMC61_0515 hypothetical protein YP_003670941.1 KEGG: gyc:GYMC61_0516 hypothetical protein YP_003670942.1 KEGG: gyc:GYMC61_0517 hypothetical protein YP_003670943.1 KEGG: gka:GK2161 sporulation-specific SASP protein (sigma-G-dependent sporulation specific SASP protein) YP_003670944.1 KEGG: gyc:GYMC61_0519 hypothetical protein YP_003670945.1 KEGG: gyc:GYMC61_0520 hypothetical protein YP_003670946.1 PFAM: heat shock protein Hsp20; KEGG: gka:GK2159 heat shock protein class I (low molecular weight) YP_003670947.1 KEGG: gka:GK2158 hypothetical protein YP_003670948.1 KEGG: gyc:GYMC61_0523 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003670949.1 KEGG: gyc:GYMC61_0524 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003670950.1 KEGG: gyc:GYMC61_0525 hypothetical protein YP_003670951.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: gyc:GYMC61_0526 glycerol-3-phosphate responsive antiterminator, GlpP YP_003670952.1 KEGG: gka:GK2153 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase YP_003670953.1 KEGG: gka:GK2151 hypothetical protein YP_003670954.1 KEGG: hor:Hore_20640 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003670955.1 PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4064 extracellular solute-binding protein family 1 YP_003670956.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pjd:Pjdr2_4063 binding-protein-dependent transport systems inner membrane component YP_003670957.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pjd:Pjdr2_4062 binding-protein-dependent transport systems inner membrane component YP_003670958.1 PFAM: glycoside hydrolase family 43; KEGG: dfe:Dfer_4703 glycoside hydrolase family 43 YP_003670959.1 PFAM: glycoside hydrolase family 43; KEGG: ate:Athe_2371 glycoside hydrolase family 43 YP_003670960.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: pjd:Pjdr2_1616 glycoside hydrolase family 2 sugar binding YP_003670961.1 PFAM: aldo/keto reductase; KEGG: ddr:Deide_3p02710 oxidoreductase, aldo/keto reductase family YP_003670962.1 KEGG: gka:GK2150 galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein YP_003670963.1 KEGG: gka:GK2149 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003670964.1 PFAM: galactose-1-phosphate uridyl transferase domain protein; manually curated; KEGG: gka:GK2148 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase YP_003670965.1 KEGG: gka:GK2147 transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003670966.1 PFAM: heat shock protein Hsp20; KEGG: gyc:GYMC61_0540 heat shock protein HSP20 YP_003670967.1 KEGG: gyc:GYMC61_0541 hypothetical protein YP_003670968.1 PFAM: protein of unknown function YqcI/YcgG; KEGG: hla:Hlac_2102 protein of unknown function YqcI/YcgG YP_003670969.1 KEGG: gyc:GYMC61_3002 transposase IS116/IS110/IS902 family protein YP_003670970.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: btk:BT9727_2768 hypothetical protein YP_003670971.1 KEGG: gka:GK2142 hypothetical protein YP_003670972.1 KEGG: gyc:GYMC61_2985 hypothetical protein YP_003670973.1 PFAM: peptidase M29 aminopeptidase II; KEGG: gyc:GYMC61_2984 peptidase M29 aminopeptidase II YP_003670974.1 KEGG: gka:GK2139 sodium:proline symporter (osmoregulation); TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003670975.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_2975 AMP-dependent synthetase and ligase YP_003670976.1 PFAM: carboxyl transferase; KEGG: gyc:GYMC61_2974 carboxyl transferase YP_003670977.1 KEGG: gka:GK2134 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003670978.1 PFAM: protein of unknown function DUF1648; KEGG: gyc:GYMC61_2972 protein of unknown function DUF1648 YP_003670979.1 PFAM: protein of unknown function UCP033101; KEGG: gyc:GYMC61_2971 protein of unknown function UCP033101 YP_003670980.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gyc:GYMC61_2970 glyoxalase/bleomycin resistance protein/dioxygenase YP_003670981.1 KEGG: gyc:GYMC61_2969 hypothetical protein YP_003670982.1 KEGG: gyc:GYMC61_2968 small acid-soluble spore protein, H-type; TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein YP_003670983.1 KEGG: sas:SAS2540 cell wall-anchored protein YP_003670984.1 KEGG: gyc:GYMC61_2964 hypothetical protein YP_003670985.1 PFAM: protein of unknown function DUF820; KEGG: gyc:GYMC61_2963 protein of unknown function DUF820 YP_003670986.1 PFAM: protein of unknown function DUF820; KEGG: gyc:GYMC61_2962 protein of unknown function DUF820 YP_003670987.1 KEGG: gyc:GYMC61_2961 glutaminase; PFAM: glutaminase, core YP_003670988.1 KEGG: gka:GK2124 hypothetical protein YP_003670989.1 PFAM: extracellular solute-binding protein family 1; KEGG: gka:GK2123 ABC transporter substrate-binding protein YP_003670990.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_2958 binding-protein-dependent transport systems inner membrane component YP_003670991.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_2957 binding-protein-dependent transport systems inner membrane component YP_003670992.1 PFAM: MaoC domain protein dehydratase; KEGG: gyc:GYMC61_2956 MaoC domain protein dehydratase YP_003670993.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_2955 major facilitator superfamily MFS_1 YP_003670994.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_2954 GCN5-related N-acetyltransferase YP_003670995.1 KEGG: gyc:GYMC61_2793 hypothetical protein YP_003670996.1 KEGG: gyc:GYMC61_2952 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003670997.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: gyc:GYMC61_2951 oxidoreductase domain protein YP_003670998.1 PFAM: protein of unknown function DUF1037; KEGG: gka:GK2113 hypothetical protein YP_003670999.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: gyc:GYMC61_2949 oxidoreductase domain protein YP_003671000.1 PFAM: xylose isomerase; AP endonuclease 2 domain protein; KEGG: gyc:GYMC61_2948 xylose isomerase domain protein TIM barrel YP_003671001.1 KEGG: gyc:GYMC61_2947 hypothetical protein YP_003671002.1 KEGG: gyc:GYMC61_2946 hypothetical protein YP_003671003.1 KEGG: gyc:GYMC61_2942 hypothetical protein YP_003671004.1 KEGG: gka:GK2104 DNA/RNA helicase; PFAM: type III restriction protein res subunit; helicase; SMART: DEAD-like helicase ; helicase YP_003671005.1 TIGRFAM: CRISPR-associated protein Cas6; KEGG: gwc:GWCH70_2009 CRISPR-associated protein Cas6 YP_003671006.1 TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; KEGG: gwc:GWCH70_2008 CRISPR-associated CXXC_CXXC protein Cst1 YP_003671007.1 TIGRFAM: CRISPR-associated regulatory protein, DevR family; CRISPR-associated autoregulator DevR family; KEGG: gwc:GWCH70_2007 CRISPR-associated autoregulator, DevR family YP_003671008.1 KEGG: gwc:GWCH70_2006 CRISPR-associated protein Cas5 family; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: protein of unknown function DUF522 YP_003671009.1 SMART: helicase; DEAD-like helicase; manually curated; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; KEGG: gwc:GWCH70_2005 CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase; helicase domain protein YP_003671010.1 KEGG: gwc:GWCH70_2004 CRISPR-associated protein Cas4; TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4 YP_003671011.1 KEGG: afl:Aflv_0770 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48 YP_003671012.1 KEGG: afl:Aflv_0771 CRISPR-associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196 YP_003671013.1 PFAM: transposase IS4 family protein; KEGG: gyc:GYMC61_1559 transposase IS4 family protein YP_003671014.1 TIGRFAM: adenine deaminase; KEGG: gyc:GYMC61_2923 adenine deaminase; PFAM: amidohydrolase YP_003671015.1 KEGG: gyc:GYMC61_2922 hypothetical protein YP_003671016.1 KEGG: gyc:GYMC61_2921 hypothetical protein YP_003671017.1 PFAM: protein of unknown function DUF583; KEGG: gyc:GYMC61_2920 hypothetical protein YP_003671018.1 KEGG: gyc:GYMC61_2919 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003671019.1 KEGG: gyc:GYMC61_2918 hypothetical protein YP_003671020.1 TIGRFAM: CoA-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: gka:GK2091 hypothetical protein; SMART: rhodanese YP_003671021.1 PFAM: FAD dependent oxidoreductase; KEGG: gyc:GYMC61_2915 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003671022.1 KEGG: gyc:GYMC61_2914 hypothetical protein YP_003671023.1 KEGG: gyc:GYMC61_2913 beta-lactamase; PFAM: rhodanese; SMART: rhodanese YP_003671024.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold domain protein; KEGG: gyc:GYMC61_2912 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein YP_003671025.1 KEGG: gyc:GYMC61_2911 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003671026.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gyc:GYMC61_2910 cytochrome bd ubiquinol oxidase subunit I YP_003671027.1 KEGG: gyc:GYMC61_2909 cytochrome bd-type ubiquinol oxidase subunit II YP_003671028.1 KEGG: gyc:GYMC61_2908 hypothetical protein YP_003671029.1 PFAM: protein of unknown function DUF202; KEGG: gyc:GYMC61_2902 protein of unknown function DUF202 YP_003671030.1 KEGG: gyc:GYMC61_2901 glycoside hydrolase family 18; PFAM: glycoside hydrolase family 18; peptidoglycan-binding lysin domain; SMART: chitinase II; peptidoglycan-binding LysM YP_003671031.1 PFAM: DsrE family protein; KEGG: gyc:GYMC61_2900 DsrE family protein YP_003671032.1 KEGG: gyc:GYMC61_2899 glutaredoxin-like protein, YruB-family; TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin YP_003671033.1 KEGG: gyc:GYMC61_2898 beta-lactamase; PFAM: rhodanese; SMART: rhodanese YP_003671034.1 PFAM: methyltransferase type 11; KEGG: gyc:GYMC61_2897 methyltransferase type 11 YP_003671035.1 KEGG: gyc:GYMC61_2896 hypothetical protein YP_003671036.1 PFAM: protein of unknown function DUF156; KEGG: gyc:GYMC61_2895 protein of unknown function DUF156 YP_003671037.1 PFAM: SirA family protein; KEGG: gyc:GYMC61_2894 SirA family protein YP_003671038.1 KEGG: gyc:GYMC61_2893 NADH dehydrogenase YP_003671039.1 KEGG: gyc:GYMC61_2892 rhodanese domain protein; PFAM: rhodanese; SMART: rhodanese YP_003671040.1 KEGG: gyc:GYMC61_2891 rhodanese domain protein; PFAM: rhodanese; SMART: rhodanese YP_003671041.1 KEGG: gyc:GYMC61_2890 SirA family protein; PFAM: SirA family protein; rhodanese; SMART: rhodanese YP_003671042.1 KEGG: gka:GK2065 hypothetical protein; PFAM: Rhodanese domain protein; SMART: rhodanese YP_003671043.1 PFAM: protein of unknown function DUF81; KEGG: gyc:GYMC61_2888 protein of unknown function DUF81 YP_003671044.1 PFAM: protein of unknown function DUF302; KEGG: gyc:GYMC61_2887 protein of unknown function DUF302 YP_003671045.1 PFAM: fatty acid desaturase; KEGG: gyc:GYMC61_2886 fatty acid desaturase YP_003671046.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gyc:GYMC61_2885 protein of unknown function DUF6 transmembrane YP_003671047.1 PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: gyc:GYMC61_2884 plasmid pRiA4b ORF-3 family protein YP_003671048.1 KEGG: gyc:GYMC61_2883 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003671049.1 KEGG: gtn:GTNG_1953 hypothetical protein YP_003671050.1 PFAM: citrate synthase; KEGG: gtn:GTNG_1952 citrate synthase YP_003671051.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: gtn:GTNG_1950 sorbitol dehydrogenase (L-iditol 2-dehydrogenase) YP_003671052.1 PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: gtn:GTNG_1949 acetolactate synthase large subunit YP_003671053.1 PFAM: xylose isomerase; KEGG: gtn:GTNG_1948 hypothetical protein YP_003671054.1 KEGG: gtn:GTNG_1946 ABC transporter periplasmic solute-binding protein; TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: extracellular solute-binding protein, family 7 YP_003671055.1 PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: gka:GK1973 transporter YP_003671056.1 KEGG: gka:GK1972 transporter; TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit YP_003671057.1 PFAM: major facilitator superfamily MFS_1; KEGG: gtn:GTNG_1943 D-galactonate transporter YP_003671058.1 KEGG: gtn:GTNG_1942 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003671059.1 TIGRFAM: 3-dehydroquinate dehydratase, type I; KEGG: gtn:GTNG_1941 3-dehydroquinate dehydratase; PFAM: dehydroquinase class I YP_003671060.1 KEGG: gtn:GTNG_1940 hypothetical protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_003671061.1 KEGG: gtn:GTNG_1939 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003671062.1 KEGG: gyc:GYMC61_2880 shikimate kinase; PFAM: shikimate kinase YP_003671063.1 KEGG: gka:GK2053 hypothetical protein YP_003671064.1 PFAM: glycosyl transferase family 39; KEGG: pth:PTH_0041 hypothetical protein YP_003671065.1 PFAM: glycosyl transferase family 2; KEGG: gyc:GYMC61_2876 glycosyl transferase family 2 YP_003671066.1 PFAM: GtrA family protein; KEGG: gyc:GYMC61_2875 GtrA family protein YP_003671067.1 KEGG: gyc:GYMC61_2873 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase YP_003671068.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: gyc:GYMC61_2872 glutamate 5-kinase; SMART: PUA domain containing protein YP_003671069.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: gyc:GYMC61_2871 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003671070.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: gyc:GYMC61_2870 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003671071.1 KEGG: gka:GK2044 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein YP_003671072.1 KEGG: gyc:GYMC61_2868 phenylacetate-CoA oxygenase, PaaH subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B YP_003671073.1 KEGG: gyc:GYMC61_2867 phenylacetate-CoA oxygenase, PaaI subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein YP_003671074.1 KEGG: gka:GK2041 ring-oxidation complex protein 3 (phenylacetic acid catabolism); TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59 YP_003671075.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: gyc:GYMC61_2865 ethyl tert-butyl ether degradation EthD YP_003671076.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_2864 enoyl-CoA hydratase/isomerase YP_003671077.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_2863 enoyl-CoA hydratase/isomerase YP_003671078.1 PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_2862 aldehyde dehydrogenase YP_003671079.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_2861 3-hydroxybutyryl-CoA dehydrogenase YP_003671080.1 KEGG: gyc:GYMC61_2860 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003671081.1 KEGG: gka:GK2034 repressor in the phenylacetic acid catabolism; TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein domain; PaaX domain protein YP_003671082.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: gka:GK2032 hypothetical protein YP_003671083.1 KEGG: gtn:GTNG_3483 lipoprotein YP_003671084.1 KEGG: gyc:GYMC61_2849 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_003671085.1 KEGG: gyc:GYMC61_2848 ABC transporter protein; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA YP_003671086.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_2847 binding-protein-dependent transport systems inner membrane component YP_003671087.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_2846 binding-protein-dependent transport systems inner membrane component YP_003671088.1 PFAM: extracellular solute-binding protein family 1; KEGG: gyc:GYMC61_2845 extracellular solute-binding protein family 1 YP_003671089.1 KEGG: gyc:GYMC61_2844 hypothetical protein YP_003671090.1 PFAM: capsule synthesis protein, CapA; KEGG: gyc:GYMC61_2843 capsule synthesis protein, CapA YP_003671091.1 KEGG: gyc:GYMC61_2842 sortase family protein; TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B YP_003671092.1 KEGG: gyc:GYMC61_2841 LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Gram-positive anchor YP_003671093.1 KEGG: gyc:GYMC61_2839 hypothetical protein YP_003671094.1 KEGG: gyc:GYMC61_2838 hypothetical protein YP_003671095.1 PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_2837 aldehyde dehydrogenase YP_003671096.1 KEGG: gka:GK1997 repressor in the phenylacetic acid catabolism; manually curated; PFAM: PaaX domain protein domain; PaaX domain protein YP_003671097.1 KEGG: gyc:GYMC61_2834 beta-lactamase YP_003671098.1 PFAM: phenylacetic acid catabolic family protein; KEGG: gyc:GYMC61_2833 phenylacetic acid catabolic family protein YP_003671099.1 PFAM: protein of unknown function DUF59; KEGG: gyc:GYMC61_2832 protein of unknown function DUF59 YP_003671100.1 KEGG: gyc:GYMC61_2831 hypothetical protein YP_003671101.1 KEGG: gyc:GYMC61_2830 phenylacetic acid catabolism protein YP_003671102.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_2829 enoyl-CoA hydratase/isomerase YP_003671103.1 KEGG: gyc:GYMC61_2828 benzoate-CoA ligase family; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase YP_003671104.1 PFAM: thioesterase superfamily protein; KEGG: gyc:GYMC61_2827 thioesterase superfamily protein YP_003671105.1 KEGG: gyc:GYMC61_2826 adenine deaminase; PFAM: amidohydrolase YP_003671106.1 PFAM: sodium symporter; KEGG: gyc:GYMC61_2825 bile acid:sodium symporter YP_003671107.1 PFAM: lipolytic protein G-D-S-L family; KEGG: gtn:GTNG_1887 rhamnogalacturonan acetylesterase YP_003671108.1 manually curated; KEGG: gtn:GTNG_1886 hypothetical protein YP_003671109.1 PFAM: protein of unknown function DUF2515; KEGG: gtn:GTNG_1885 hypothetical protein YP_003671110.1 TIGRFAM: squalene/oxidosqualene cyclase; KEGG: gyc:GYMC61_2820 squalene/oxidosqualene cyclase; PFAM: prenyltransferase/squalene oxidase YP_003671111.1 KEGG: gyc:GYMC61_2819 triacylglycerol lipase YP_003671112.1 PFAM: protein of unknown function DUF820; KEGG: gyc:GYMC61_2818 protein of unknown function DUF820 YP_003671113.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: gyc:GYMC61_2817 transcriptional coactivator/pterin dehydratase YP_003671114.1 KEGG: gyc:GYMC61_2816 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_003671115.1 PFAM: YceI family protein; KEGG: gyc:GYMC61_2815 YceI family protein YP_003671116.1 PFAM: helix-turn-helix protein RpiR; KEGG: gtn:GTNG_1879 RpiR family transcriptional regulator YP_003671117.1 KEGG: gyc:GYMC61_2810 response regulator receiver protein; PFAM: YcbB domain protein; response regulator receiver; SMART: response regulator receiver YP_003671118.1 manually curated; PFAM: ATP-binding region ATPase domain protein; KEGG: gyc:GYMC61_2809 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein YP_003671119.1 KEGG: gyc:GYMC61_2808 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003671120.1 KEGG: gyc:GYMC61_2807 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003671121.1 KEGG: gyc:GYMC61_2806 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_003671122.1 KEGG: gyc:GYMC61_2805 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671123.1 PFAM: aldo/keto reductase; KEGG: gyc:GYMC61_2804 aldo/keto reductase YP_003671124.1 KEGG: gka:GK1974 C4-dicarboxylate transporter (C4-dicarboxylate-binding protein); TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: extracellular solute-binding protein, family 7 YP_003671125.1 PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: gka:GK1973 transporter YP_003671126.1 KEGG: gka:GK1972 transporter; TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit YP_003671127.1 KEGG: gka:GK1971 C4-dicarboxylate transporter (C4-dicarboxylate-binding protein); TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: extracellular solute-binding protein, family 7 YP_003671128.1 PFAM: protein of unknown function DUF2088; KEGG: gka:GK1970 hypothetical protein YP_003671129.1 KEGG: gka:GK1969 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003671130.1 KEGG: gka:GK1968 transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003671131.1 PFAM: fumarylacetoacetate hydrolase; KEGG: gka:GK1967 hypothetical protein YP_003671132.1 PFAM: aldehyde dehydrogenase; KEGG: gka:GK1966 aldehyde dehydrogenase YP_003671133.1 PFAM: asparagine synthase; KEGG: gka:GK1965 hypothetical protein YP_003671134.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: gka:GK1964 hypothetical protein YP_003671135.1 PFAM: protein of unknown function DUF111; KEGG: gka:GK1963 hypothetical protein YP_003671136.1 PFAM: high-affinity nickel-transporter; KEGG: gka:GK1962 urease accessory protein YP_003671137.1 PFAM: dihydrodipicolinate synthetase; KEGG: gka:GK1961 dihydrodipicolinate synthase YP_003671138.1 KEGG: gka:GK1960 hypothetical protein YP_003671139.1 KEGG: gka:GK1959 hypothetical protein; PFAM: SAF domain protein; SMART: SAF domain protein YP_003671140.1 KEGG: gka:GK1958 hypothetical protein; PFAM: D-galactarate dehydratase/altronate hydrolase domain protein YP_003671141.1 PFAM: PfkB domain protein; KEGG: gka:GK1957 2-keto-3-deoxy-gluconate kinase YP_003671142.1 KEGG: gka:GK1956 2-dehydro-3-deoxyphosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_003671143.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: gka:GK1954 dehydrogenase YP_003671144.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: gka:GK1953 transcriptional regulator; SMART: ATPase AAA; PAS domain containing protein YP_003671145.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gka:GK1952 alcohol dehydrogenase YP_003671146.1 KEGG: gka:GK1951 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003671147.1 PFAM: protein of unknown function UPF0175; KEGG: gyc:GYMC61_2800 protein of unknown function UPF0175 YP_003671148.1 KEGG: gyc:GYMC61_2799 nucleic acid-binding protein contains PIN domain-like protein YP_003671149.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; KEGG: gka:GK1948 PTS system, mannitol-permease II, BC component; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIsubunit beta YP_003671150.1 KEGG: gyc:GYMC61_2796 PTS modulated transcriptional regulator, MtlR family; PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_003671151.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gyc:GYMC61_2795 protein-N(pi)-phosphohistidine--sugar phosphotransferase YP_003671152.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: gyc:GYMC61_2794 mannitol dehydrogenase domain protein YP_003671153.1 KEGG: gyc:GYMC61_2793 hypothetical protein YP_003671154.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_2792 hypothetical protein YP_003671155.1 KEGG: gyc:GYMC61_2791 tricarboxylate transport protein TctB YP_003671156.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: gyc:GYMC61_2790 protein of unknown function DUF112 transmembrane YP_003671157.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; KEGG: gyc:GYMC61_2789 signal transduction histidine kinase regulating citrate/malate metabolism; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_003671158.1 KEGG: gyc:GYMC61_2788 response regulator receiver and unknown domain protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003671159.1 PFAM: hypothetical protein; KEGG: gyc:GYMC61_2787 auxin efflux carrier YP_003671160.1 manually curated; KEGG: gyc:GYMC61_2786 hypothetical protein YP_003671161.1 KEGG: gyc:GYMC61_2785 hypothetical protein YP_003671162.1 KEGG: gyc:GYMC61_2782 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003671163.1 KEGG: gyc:GYMC61_2781 gluconate kinase; TIGRFAM: gluconate kinase; PFAM: carbohydrate kinase, FGGY-like YP_003671164.1 KEGG: gyc:GYMC61_2780 gluconate transporter; TIGRFAM: gluconate transporter; PFAM: gluconate transporter YP_003671165.1 KEGG: gyc:GYMC61_2779 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer YP_003671166.1 KEGG: gka:GK1937 ABC transporter substrate-binding protein; TIGRFAM: urea ABC transporter substrate-binding protein; PFAM: extracellular ligand-binding receptor YP_003671167.1 KEGG: gyc:GYMC61_2777 UreA ABC transporter permease protein UrtB; TIGRFAM: urea ABC transporter permease; PFAM: inner-membrane translocator YP_003671168.1 TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter; KEGG: gyc:GYMC61_2775 UreA ABC transporter ATP-binding protein UrtD; SMART: ATPase AAA YP_003671169.1 TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter; KEGG: gka:GK1933 ABC transporter ATP-binding protein; SMART: ATPase AAA YP_003671170.1 TIGRFAM: urease subunit gamma; KEGG: gyc:GYMC61_2773 urease subunit gamma; PFAM: Urease subunit gamma region YP_003671171.1 TIGRFAM: urease subunit beta; KEGG: gyc:GYMC61_2772 urease subunit beta; PFAM: Urease subunit beta YP_003671172.1 TIGRFAM: urease subunit alpha; KEGG: gyc:GYMC61_2771 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein YP_003671173.1 PFAM: UreE urease accessory domain protein; KEGG: gyc:GYMC61_2770 UreE urease accessory domain protein YP_003671174.1 PFAM: Urease accessory protein UreF; KEGG: gyc:GYMC61_2769 urease accessory protein UreF YP_003671175.1 KEGG: gka:GK1927 urease accessory protein; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K YP_003671176.1 PFAM: Urease accessory protein UreD; KEGG: gyc:GYMC61_2767 urease accessory protein UreD YP_003671177.1 PFAM: high-affinity nickel-transporter; KEGG: gyc:GYMC61_2766 urease accessory protein YP_003671178.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_2765 GCN5-related N-acetyltransferase YP_003671179.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_2764 major facilitator superfamily MFS_1 YP_003671180.1 KEGG: gyc:GYMC61_2763 D-serine ammonia-lyase; TIGRFAM: D-serine ammonia-lyase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit YP_003671181.1 KEGG: gtn:GTNG_1832 maltose transacetylase (maltoseO-acetyltransferase) YP_003671182.1 PFAM: cyclase family protein; KEGG: gyc:GYMC61_2761 cyclase family protein YP_003671183.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gyc:GYMC61_2760 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003671184.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: gyc:GYMC61_2759 permease for cytosine/purines uracil thiamine allantoin YP_003671185.1 PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_2758 betaine-aldehyde dehydrogenase YP_003671186.1 KEGG: gyc:GYMC61_2757 agmatinase; TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase YP_003671187.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; hypothetical protein; helix-turn-helix Fis-type; KEGG: gyc:GYMC61_2756 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: ATPase AAA YP_003671188.1 TIGRFAM: 4-aminobutyrate aminotransferase; KEGG: gyc:GYMC61_2755 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_003671189.1 KEGG: gyc:GYMC61_2754 acetylornithine transaminase; PFAM: aminotransferase class-III YP_003671190.1 PFAM: Na+/solute symporter; KEGG: gyc:GYMC61_2753 Na+/solute symporter YP_003671191.1 PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_2752 aldehyde dehydrogenase YP_003671192.1 PFAM: glycosyl transferase family 39; KEGG: gyc:GYMC61_2751 glycosyl transferase family 39 YP_003671193.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_2750 enoyl-CoA hydratase/isomerase YP_003671194.1 KEGG: gka:GK1913 sugar ABC transporter (sugar-binding protein) YP_003671195.1 KEGG: gka:GK1912 two-component sensor histidine kinase; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; Cache domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein YP_003671196.1 KEGG: gka:GK1911 two-component response regulator; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver YP_003671197.1 KEGG: gka:GK1910 ABC transporter substrate-binding protein YP_003671198.1 KEGG: gka:GK1909 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671199.1 PFAM: inner-membrane translocator; KEGG: gka:GK1908 L-arabinose ABC transporter permease YP_003671200.1 KEGG: gyc:GYMC61_2737 transcriptional regulator, GntR family with LacI sensor; PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH YP_003671201.1 KEGG: gka:GK1906 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein YP_003671202.1 KEGG: gka:GK1905 ribulokinase; TIGRFAM: L-ribulokinase; PFAM: carbohydrate kinase, FGGY-like YP_003671203.1 KEGG: gka:GK1904 L-arabinose isomerase; PFAM: L-arabinose isomerase YP_003671204.1 PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_1794 L-arabinose transporter (sugar-binding protein) YP_003671205.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_1793 L-arabinose transporter (permease) YP_003671206.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gtn:GTNG_1792 L-arabinose transporter (permease) YP_003671207.1 KEGG: gtn:GTNG_1791 alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein YP_003671208.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: gyc:GYMC61_2724 oxidoreductase domain protein YP_003671209.1 KEGG: gyc:GYMC61_2723 aldose 1-epimerase; PFAM: aldose 1-epimerase YP_003671210.1 KEGG: gyc:GYMC61_2722 HAD-superfamily hydrolase, subfamily IIA; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: haloacid dehalogenase YP_003671211.1 PFAM: 3-dehydroquinate synthase; KEGG: gyc:GYMC61_2721 3-dehydroquinate synthase YP_003671212.1 KEGG: gka:GK0405 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003671213.1 KEGG: gyc:GYMC61_2719 integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003671214.1 KEGG: gyc:GYMC61_2718 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver YP_003671215.1 PFAM: extracellular solute-binding protein family 1; KEGG: gyc:GYMC61_2716 extracellular solute-binding protein family 1 YP_003671216.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_2715 binding-protein-dependent transport systems inner membrane component YP_003671217.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_2714 binding-protein-dependent transport systems inner membrane component YP_003671218.1 KEGG: gyc:GYMC61_2713 aldose 1-epimerase; PFAM: aldose 1-epimerase YP_003671219.1 PFAM: polysaccharide deacetylase; KEGG: gyc:GYMC61_2712 polysaccharide deacetylase YP_003671220.1 KEGG: gyc:GYMC61_2711 xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 52 YP_003671221.1 PFAM: glycoside hydrolase family 10; KEGG: gyc:GYMC61_2710 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10 YP_003671222.1 PFAM: extracellular solute-binding protein family 1; KEGG: gyc:GYMC61_2709 extracellular solute-binding protein family 1 YP_003671223.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_2708 binding-protein-dependent transport systems inner membrane component YP_003671224.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_2707 binding-protein-dependent transport systems inner membrane component YP_003671225.1 KEGG: gyc:GYMC61_2706 alpha-glucuronidase; PFAM: glycosyl hydrolase 67 middle domain protein; glycoside hydrolase family 67; glycosyl hydrolase 67 C-teriminal domain protein YP_003671226.1 KEGG: gyc:GYMC61_2705 glycoside hydrolase family 39; PFAM: glycoside hydrolase family 39 YP_003671227.1 PFAM: PfkB domain protein; KEGG: gyc:GYMC61_2704 PfkB domain protein YP_003671228.1 KEGG: gyc:GYMC61_2703 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_003671229.1 KEGG: gyc:GYMC61_2702 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003671230.1 KEGG: gtn:GTNG_1765 uronate isomerase; PFAM: glucuronate isomerase YP_003671231.1 TIGRFAM: mannonate dehydratase; KEGG: gyc:GYMC61_2699 mannonate dehydratase; PFAM: Mannonate dehydratase YP_003671232.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_2698 short-chain dehydrogenase/reductase SDR YP_003671233.1 PFAM: protein of unknown function DUF624; KEGG: gyc:GYMC61_2697 protein of unknown function DUF624 YP_003671234.1 PFAM: glycoside hydrolase family 10; KEGG: gtn:GTNG_1761 xylanase T-6; SMART: glycoside hydrolase family 10 YP_003671235.1 PFAM: protein of unknown function DUF34; KEGG: gtn:GTNG_1760 NGG1-interacting factor 3 YP_003671236.1 PFAM: lipolytic protein G-D-S-L family; KEGG: gyc:GYMC61_2692 lipolytic protein G-D-S-L family YP_003671237.1 KEGG: bha:BH2109 hypothetical protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain YP_003671238.1 manually curated; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH2110 hypothetical protein; SMART: histidine kinase HAMP region domain protein YP_003671239.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH2111 hypothetical protein YP_003671240.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2112 transmembrane lipoprotein YP_003671241.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2113 ABC transporter permease YP_003671242.1 TIGRFAM: xylose isomerase; KEGG: gyc:GYMC61_2688 xylose isomerase; PFAM: xylose isomerase YP_003671243.1 KEGG: gyc:GYMC61_2687 xylulokinase; TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY-like YP_003671244.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: gka:GK1872 oxidoreductase YP_003671245.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: gyc:GYMC61_2683 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: ATPase AAA; PAS domain containing protein YP_003671246.1 KEGG: gyc:GYMC61_2682 beta-lactamase YP_003671247.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gyc:GYMC61_2681 iron-containing alcohol dehydrogenase YP_003671248.1 PFAM: thioesterase superfamily protein; KEGG: gyc:GYMC61_2680 thioesterase superfamily protein YP_003671249.1 KEGG: gyc:GYMC61_2679 hypothetical protein YP_003671250.1 KEGG: gyc:GYMC61_2678 nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region YP_003671251.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: gka:GK1867 assimilatory nitrite reductase subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain YP_003671252.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gyc:GYMC61_2676 molybdopterin oxidoreductase YP_003671253.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_2675 major facilitator superfamily MFS_1 YP_003671254.1 KEGG: gyc:GYMC61_2673 hypothetical protein YP_003671255.1 KEGG: gyc:GYMC61_2672 hypothetical protein YP_003671256.1 KEGG: gyc:GYMC61_2671 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003671257.1 KEGG: gyc:GYMC61_2670 phosphotransferase system lactose/cellobiose-specific IIsubunit beta; PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta YP_003671258.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: gyc:GYMC61_2669 phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha YP_003671259.1 TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: gyc:GYMC61_2668 PTS system, cellobiose-specific IIC subunit; PFAM: phosphotransferase system EIIC YP_003671260.1 KEGG: gyc:GYMC61_2667 beta-glucosidase; PFAM: glycoside hydrolase family 1 YP_003671261.1 KEGG: gyc:GYMC61_2666 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003671262.1 KEGG: gka:GK1854 hypothetical protein YP_003671263.1 PFAM: metallophosphoesterase; KEGG: gyc:GYMC61_2663 metallophosphoesterase YP_003671264.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: gka:GK1852 hypothetical protein YP_003671265.1 PFAM: endonuclease I; KEGG: gyc:GYMC61_2661 endonuclease I YP_003671266.1 PFAM: sodium symporter; KEGG: gyc:GYMC61_2660 bile acid:sodium symporter YP_003671267.1 PFAM: FeoA family protein; KEGG: gyc:GYMC61_2659 FeoA family protein YP_003671268.1 KEGG: gka:GK1848 ferrous iron uptake system protein B; TIGRFAM: ferrous iron transporter B; small GTP-binding protein; PFAM: Ferrous iron transporter B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein YP_003671269.1 KEGG: gyc:GYMC61_2657 hypothetical protein YP_003671270.1 KEGG: gyc:GYMC61_2656 death-on-curing family protein; TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic YP_003671271.1 KEGG: gyc:GYMC61_2655 MazE family transcriptional regulator; TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein YP_003671272.1 manually curated; KEGG: gyc:GYMC61_2654 hypothetical protein YP_003671273.1 TIGRFAM: diguanylate cyclase; metal dependent phophohydrolase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; KEGG: gyc:GYMC61_2652 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region YP_003671274.1 KEGG: gyc:GYMC61_2651 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003671275.1 TIGRFAM: 1-phosphofructokinase; KEGG: gyc:GYMC61_2650 1-phosphofructokinase; PFAM: PfkB domain protein YP_003671276.1 KEGG: gka:GK1838 PTS system, fructose-specific enzyme II, BC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIsubunit alpha; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIsubunit beta; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC YP_003671277.1 PFAM: permease; KEGG: gyc:GYMC61_2648 permease YP_003671278.1 PFAM: protein of unknown function DUF1980; KEGG: gyc:GYMC61_2647 protein of unknown function DUF1980 YP_003671279.1 KEGG: gyc:GYMC61_2646 hypothetical protein YP_003671280.1 PFAM: protein of unknown function UPF0047; KEGG: gyc:GYMC61_2645 protein of unknown function UPF0047 YP_003671281.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: gyc:GYMC61_2644 methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003671282.1 KEGG: gyc:GYMC61_2643 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003671283.1 manually curated; TIGRFAM: M6 family metalloprotease domain protein; KEGG: gyc:GYMC61_2642 M6 family metalloprotease domain protein; PFAM: peptidase M6 immune inhibitor A YP_003671284.1 KEGG: gyc:GYMC61_2641 hypothetical protein YP_003671285.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: gyc:GYMC61_2640 uroporphyrinogen III synthase HEM4 YP_003671286.1 PFAM: hemerythrin HHE cation binding domain protein; KEGG: gtn:GTNG_1716 hypothetical protein YP_003671287.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: gyc:GYMC61_2638 respiratory nitrate reductase, gamma subunit; PFAM: nitrate reductase subunit gamma YP_003671288.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: gyc:GYMC61_2637 nitrate reductase molybdenum cofactor assembly chaperone; PFAM: nitrate reductase subunit delta YP_003671289.1 TIGRFAM: nitrate reductase subunit beta; KEGG: gyc:GYMC61_2636 nitrate reductase subunit beta YP_003671290.1 TIGRFAM: nitrate reductase, subunit alpha; KEGG: gtn:GTNG_1712 respiratory nitrate reductase subunit alpha; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_003671291.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: gyc:GYMC61_2634 membrane-bound metal-dependent hydrolase YP_003671292.1 PFAM: BAAT/acyl-CoA thioester hydrolase; KEGG: gyc:GYMC61_2633 BAAT/acyl-CoA thioester hydrolase YP_003671293.1 KEGG: gyc:GYMC61_2632 tetratricopeptide TPR_2 repeat protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; hypothetical protein; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein YP_003671294.1 KEGG: gyc:GYMC61_2630 hypothetical protein YP_003671295.1 KEGG: gyc:GYMC61_2629 membrane protein insertase, YidC/Oxa1 family; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: hypothetical protein YP_003671296.1 PFAM: isochorismatase hydrolase; KEGG: gyc:GYMC61_2628 isochorismatase hydrolase YP_003671297.1 KEGG: gyc:GYMC61_2627 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_003671298.1 KEGG: gyc:GYMC61_2626 oligoendopeptidase F; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F YP_003671299.1 PFAM: aldo/keto reductase; KEGG: gyc:GYMC61_2625 aldo/keto reductase YP_003671300.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; KEGG: gyc:GYMC61_2624 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003671301.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: gyc:GYMC61_2623 glycerophosphoryl diester phosphodiesterase YP_003671302.1 KEGG: gka:GK1813 ribonuclease activity regulator protein RraA; TIGRFAM: regulator of ribonuclease activity A; PFAM: dimethylmenaquinone methyltransferase YP_003671303.1 KEGG: gwc:GWCH70_1422 hypothetical protein YP_003671304.1 KEGG: gka:GK1811 hypothetical protein YP_003671305.1 KEGG: gka:GK1810 cobalamin biosynthesis protein YP_003671306.1 KEGG: gtn:GTNG_1698 cobalt transporter CbiM; TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein YP_003671307.1 KEGG: gka:GK1808 cobalt transporter CbiN; TIGRFAM: cobalt transporter; PFAM: Cobalt transporter CbiN YP_003671308.1 PFAM: cobalt transporter; KEGG: gka:GK1807 cobalt transporter system (permease) YP_003671309.1 KEGG: gka:GK1806 cobalt ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671310.1 KEGG: gka:GK1805 precorrin-3B methylase; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; nitrite and sulphite reductase 4Fe-4S region YP_003671311.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gka:GK1804 hypothetical protein YP_003671312.1 KEGG: gka:GK1803 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK YP_003671313.1 KEGG: gtn:GTNG_1691 cobalamin biosynthesis protein CbiC; PFAM: precorrin-8X methylmutase CbiC/CobH YP_003671314.1 KEGG: gyc:GYMC61_2612 cobalamin biosynthesis protein CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein YP_003671315.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: gyc:GYMC61_2611 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003671316.1 TIGRFAM: precorrin-2 C20-methyltransferase; KEGG: gyc:GYMC61_2610 precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003671317.1 KEGG: gka:GK1798 precorrin-4 methylase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003671318.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: gyc:GYMC61_2608 cobalamin (vitamin B12) biosynthesis CbiG protein YP_003671319.1 KEGG: gtn:GTNG_1685 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase YP_003671320.1 KEGG: gyc:GYMC61_2606 cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase YP_003671321.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: gyc:GYMC61_2604 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003671322.1 KEGG: gyc:GYMC61_2603 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003671323.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: gyc:GYMC61_2602 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_003671324.1 KEGG: gka:GK1790 hypothetical protein YP_003671325.1 PFAM: conserved hypothetical protein; KEGG: gka:GK1788 hypothetical protein YP_003671326.1 TIGRFAM: homoserine O-succinyltransferase; KEGG: gka:GK1787 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase YP_003671327.1 KEGG: gyc:GYMC61_2598 hypothetical protein YP_003671328.1 KEGG: gyc:GYMC61_2597 peroxiredoxin; PFAM: glutathione peroxidase YP_003671329.1 PFAM: Scaffold protein Nfu/NifU ; PBS lyase HEAT domain protein repeat-containing protein; KEGG: gyc:GYMC61_2596 scaffold protein Nfu/NifU YP_003671330.1 KEGG: gka:GK1783 hypothetical protein YP_003671331.1 KEGG: dhd:Dhaf_2213 hypothetical protein YP_003671332.1 PFAM: protein of unknown function DUF1094; KEGG: gyc:GYMC61_2594 protein of unknown function DUF1094 YP_003671333.1 KEGG: gyc:GYMC61_2593 hypothetical protein YP_003671334.1 PFAM: aminotransferase class I and II; KEGG: gyc:GYMC61_2592 aminotransferase class I and II YP_003671335.1 KEGG: gyc:GYMC61_2591 hypothetical protein YP_003671336.1 KEGG: gyc:GYMC61_2590 hypothetical protein YP_003671337.1 TIGRFAM: thymidylate synthase; KEGG: gyc:GYMC61_2589 thymidylate synthase; PFAM: thymidylate synthase YP_003671338.1 KEGG: gyc:GYMC61_2588 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_003671339.1 manually curated YP_003671340.1 PFAM: protein of unknown function DUF2512; KEGG: gka:GK1774 hypothetical protein YP_003671341.1 KEGG: gyc:GYMC61_2586 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; threonine dehydratase domain protein YP_003671342.1 PFAM: protein of unknown function DUF2535; KEGG: gyc:GYMC61_2585 protein of unknown function DUF2535 YP_003671343.1 KEGG: gyc:GYMC61_2584 hypothetical protein YP_003671344.1 PFAM: electron transporter SCO1/SenC; KEGG: gka:GK1770 hypothetical protein YP_003671345.1 PFAM: lipolytic protein G-D-S-L family; KEGG: gyc:GYMC61_2582 lipolytic protein G-D-S-L family YP_003671346.1 PFAM: protein of unknown function DUF2140; KEGG: gyc:GYMC61_2581 protein of unknown function DUF2140 YP_003671347.1 KEGG: gyc:GYMC61_2580 RNA methylase, NOL1/NOP2/sun family; TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein YP_003671348.1 PFAM: protein of unknown function DUF205; KEGG: gyc:GYMC61_2579 protein of unknown function DUF205 YP_003671349.1 PFAM: OsmC family protein; KEGG: gyc:GYMC61_2578 OsmC family protein YP_003671350.1 PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: gka:GK1763 5'-nucleotidase YP_003671351.1 TIGRFAM: peptidase T; KEGG: gyc:GYMC61_2574 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_003671352.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gyc:GYMC61_2573 threonine synthase YP_003671353.1 PFAM: oxidoreductase molybdopterin binding; KEGG: gyc:GYMC61_2571 oxidoreductase molybdopterin binding protein YP_003671354.1 PFAM: protein of unknown function DUF969; KEGG: gyc:GYMC61_2570 protein of unknown function DUF969 YP_003671355.1 PFAM: protein of unknown function DUF979; KEGG: gyc:GYMC61_2569 protein of unknown function DUF979 YP_003671356.1 TIGRFAM: pyrrolidone-carboxylate peptidase; KEGG: gyc:GYMC61_2568 pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I YP_003671357.1 KEGG: gyc:GYMC61_2566 hypothetical protein YP_003671358.1 PFAM: conserved hypothetical protein; KEGG: gka:GK1757 hypothetical protein YP_003671359.1 KEGG: gyc:GYMC61_2562 hypothetical protein YP_003671360.1 PFAM: ABC transporter; KEGG: gyc:GYMC61_2561 ABC-1 domain protein YP_003671361.1 KEGG: gka:GK1753 hypothetical protein YP_003671362.1 PFAM: CoA-binding protein; KEGG: gyc:GYMC61_2559 CoA-binding protein YP_003671363.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV subunit beta; KEGG: gka:GK1751 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein YP_003671364.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV subunit alpha; DNA gyrase subunit alpha; KEGG: gyc:GYMC61_2557 DNA topoisomerase IV subunit alpha; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003671365.1 PFAM: type IV pilus assembly PilZ; KEGG: gyc:GYMC61_2556 type IV pilus assembly PilZ YP_003671366.1 KEGG: gka:GK1748 hypothetical protein YP_003671367.1 TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: gyc:GYMC61_2554 PTS system, trehalose-specific IIBC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site YP_003671368.1 TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: gka:GK1746 alpha,alpha-phosphotrehalase; SMART: alpha amylase catalytic sub domain YP_003671369.1 TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: gyc:GYMC61_2552 GntR family transcriptional regulator; SMART: regulatory protein GntR HTH YP_003671370.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: gyc:GYMC61_2551 Na+/H+ antiporter NhaC-like protein YP_003671371.1 PFAM: thioesterase superfamily protein; KEGG: gyc:GYMC61_2550 thioesterase superfamily protein YP_003671372.1 PFAM: aminotransferase class V; KEGG: gyc:GYMC61_2548 aminotransferase class V YP_003671373.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_2547 acyl-CoA dehydrogenase type 2 domain protein YP_003671374.1 KEGG: gyc:GYMC61_2546 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_003671375.1 KEGG: gyc:GYMC61_2545 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003671376.1 PFAM: globin; oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: gyc:GYMC61_2544 globin YP_003671377.1 KEGG: gyc:GYMC61_2543 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_003671378.1 PFAM: replication terminator protein; KEGG: gyc:GYMC61_2542 replication terminator protein YP_003671379.1 KEGG: gka:GK1734 denitrification regulatory protein; PFAM: ATPase AAA; SMART: ATPase AAA YP_003671380.1 SMART: von Willebrand factor A; KEGG: gka:GK1733 hypothetical protein YP_003671381.1 KEGG: gyc:GYMC61_2539 hypothetical protein YP_003671382.1 PFAM: peptidase M23; KEGG: sth:STH1076 hypothetical protein YP_003671383.1 KEGG: gka:GK1731 hypothetical protein YP_003671384.1 PFAM: NUDIX hydrolase; KEGG: gtn:GTNG_1562 NTP pyrophosphohydrolase YP_003671385.1 KEGG: gka:GK1711 hypothetical protein YP_003671386.1 TIGRFAM: catalase/peroxidase HPI; KEGG: gka:GK1710 catalase; PFAM: Haem peroxidase YP_003671387.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_2534 major facilitator superfamily MFS_1 YP_003671388.1 KEGG: gyc:GYMC61_2532 hypothetical protein YP_003671389.1 KEGG: gyc:GYMC61_2531 hypothetical protein YP_003671390.1 KEGG: gyc:GYMC61_2530 hypothetical protein YP_003671391.1 KEGG: gyc:GYMC61_2529 hypothetical protein YP_003671392.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: gyc:GYMC61_2527 lysine efflux permease-like protein YP_003671393.1 PFAM: membrane-flanked domain; KEGG: gyc:GYMC61_2526 membrane-flanked domain protein YP_003671394.1 PFAM: membrane-flanked domain; KEGG: gyc:GYMC61_2525 membrane-flanked domain protein YP_003671395.1 PFAM: protein of unknown function DUF1541; KEGG: gyc:GYMC61_2524 protein of unknown function DUF1541 YP_003671396.1 PFAM: SNARE associated Golgi protein; KEGG: gyc:GYMC61_2523 SNARE associated Golgi protein-related protein YP_003671397.1 KEGG: gka:GK1690 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003671398.1 KEGG: gyc:GYMC61_2521 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003671399.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase III; KEGG: gyc:GYMC61_2520 DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein YP_003671400.1 KEGG: gka:GK1687 hypothetical protein YP_003671401.1 KEGG: gyc:GYMC61_2518 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain YP_003671402.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_2517 enoyl-CoA hydratase/isomerase YP_003671403.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_2516 short-chain dehydrogenase/reductase SDR YP_003671404.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_2515 short-chain dehydrogenase/reductase SDR YP_003671405.1 TIGRFAM: germination protein, Ger(x)C family; KEGG: gyc:GYMC61_2513 germination protein, Ger(X)C family YP_003671406.1 KEGG: gka:GK1677 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671407.1 KEGG: gyc:GYMC61_2511 nitric-oxide synthase; PFAM: nitric oxide synthase NOS YP_003671408.1 KEGG: gyc:GYMC61_2510 YhgE/Pip N-terminal domain protein; TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; PFAM: ABC transporter YP_003671409.1 PFAM: protein of unknown function DUF606; KEGG: gyc:GYMC61_2509 protein of unknown function DUF606 YP_003671410.1 KEGG: gka:GK1668 chromate transporter; TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter YP_003671411.1 PFAM: protein of unknown function DUF988; KEGG: gyc:GYMC61_2506 protein of unknown function DUF988 YP_003671412.1 KEGG: gka:GK1666 hypothetical protein YP_003671413.1 KEGG: gka:GK1666 hypothetical protein YP_003671414.1 PFAM: OsmC family protein; KEGG: gyc:GYMC61_2505 OsmC family protein YP_003671415.1 PFAM: extracellular ligand-binding receptor; KEGG: gyc:GYMC61_2504 extracellular ligand-binding receptor YP_003671416.1 KEGG: gyc:GYMC61_2503 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671417.1 KEGG: gyc:GYMC61_2502 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671418.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_2501 inner-membrane translocator YP_003671419.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_2500 inner-membrane translocator YP_003671420.1 PFAM: regulatory protein TetR; KEGG: gyc:GYMC61_2499 TetR family transcriptional regulator YP_003671421.1 KEGG: gyc:GYMC61_2498 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003671422.1 PFAM: MaoC domain protein dehydratase; KEGG: gyc:GYMC61_2497 MaoC domain protein dehydratase YP_003671423.1 KEGG: gyc:GYMC61_2496 hypothetical protein YP_003671424.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_2495 short-chain dehydrogenase/reductase SDR YP_003671425.1 KEGG: gka:GK1654 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein YP_003671426.1 PFAM: silent information regulator protein Sir2; KEGG: gyc:GYMC61_2493 silent information regulator protein Sir2 YP_003671427.1 PFAM: nitroreductase; KEGG: gyc:GYMC61_2492 nitroreductase YP_003671428.1 PFAM: pirin; KEGG: gyc:GYMC61_2491 pirin domain protein YP_003671429.1 PFAM: PemK family protein; KEGG: gka:GK1648 ppGpp-regulated growth inhibitor (ChpA/MazF) YP_003671430.1 PFAM: SpoVT/AbrB domain protein; KEGG: gyc:GYMC61_2489 MazE family transcriptional regulator YP_003671431.1 KEGG: gka:GK1646 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003671432.1 KEGG: gyc:GYMC61_2486 hypothetical protein YP_003671433.1 KEGG: gka:GK1643 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671434.1 PFAM: lipolytic protein G-D-S-L family; KEGG: gyc:GYMC61_2484 lipolytic protein G-D-S-L family YP_003671435.1 KEGG: gka:GK1641 hypothetical protein YP_003671436.1 KEGG: gyc:GYMC61_2482 beta-lactamase YP_003671437.1 PFAM: protein of unknown function DUF81; KEGG: gka:GK1638 hypothetical protein YP_003671438.1 TIGRFAM: glutamine synthetase; KEGG: gyc:GYMC61_2480 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003671439.1 PFAM: AIG2 family protein; KEGG: gyc:GYMC61_2479 AIG2 family protein YP_003671440.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: gyc:GYMC61_2478 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003671441.1 KEGG: gyc:GYMC61_2477 hypothetical protein YP_003671442.1 KEGG: gyc:GYMC61_2476 luciferase family oxidoreductase, group 1; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_003671443.1 PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: gka:GK1632 hypothetical protein YP_003671444.1 KEGG: gka:GK1631 ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA YP_003671445.1 KEGG: gka:GK1630 ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA YP_003671446.1 KEGG: gka:GK1629 stage II sporulation protein AA; TIGRFAM: anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS YP_003671447.1 PFAM: ATP-binding region ATPase domain protein; KEGG: gyc:GYMC61_2468 anti-sigma regulatory factor, serine/threonine protein kinase YP_003671448.1 SMART: protein phosphatase 2C domain protein; PAS domain containing protein; TIGRFAM: PAS sensor protein; KEGG: gyc:GYMC61_2467 PAS/PAC sensor protein; PFAM: stage II sporulation E family protein; PAS fold domain protein YP_003671449.1 KEGG: gka:GK1626 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003671450.1 KEGG: gka:GK1625 spore germination protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein YP_003671451.1 PFAM: GerA spore germination protein; KEGG: gyc:GYMC61_2464 GerA spore germination protein YP_003671452.1 KEGG: gka:GK1623 hypothetical protein YP_003671453.1 KEGG: gyc:GYMC61_2463 hypothetical protein YP_003671454.1 KEGG: gyc:GYMC61_2462 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671455.1 KEGG: gyc:GYMC61_2461 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003671456.1 PFAM: protein of unknown function DUF421; KEGG: gyc:GYMC61_2460 protein of unknown function DUF421 YP_003671457.1 KEGG: gyc:GYMC61_2459 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003671458.1 PFAM: GerA spore germination protein; KEGG: gyc:GYMC61_2458 GerA spore germination protein YP_003671459.1 KEGG: gyc:GYMC61_2457 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein YP_003671460.1 KEGG: gka:GK1615 fosmidmycin resistance protein YP_003671461.1 KEGG: gka:GK1614 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003671462.1 KEGG: gyc:GYMC61_2454 hypothetical protein YP_003671463.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gka:GK1612 dehydrogenase YP_003671464.1 KEGG: gyc:GYMC61_2451 hypothetical protein YP_003671465.1 KEGG: gyc:GYMC61_2450 hypothetical protein YP_003671466.1 KEGG: gyc:GYMC61_2448 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003671467.1 PFAM: secretion protein HlyD; KEGG: gyc:GYMC61_2447 hypothetical protein YP_003671468.1 KEGG: gyc:GYMC61_2446 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003671469.1 KEGG: gyc:GYMC61_2445 methylcrotonoyl-CoA carboxylase; PFAM: carboxyl transferase YP_003671470.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_2444 enoyl-CoA hydratase/isomerase YP_003671471.1 PFAM: pyruvate carboxyltransferase; KEGG: gyc:GYMC61_2443 pyruvate carboxyltransferase YP_003671472.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: gyc:GYMC61_2442 biotin/lipoyl attachment domain-containing protein YP_003671473.1 PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: gyc:GYMC61_2441 carbamoyl-phosphate synthase L chain ATP-binding protein YP_003671474.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_2440 AMP-dependent synthetase and ligase YP_003671475.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_2439 acyl-CoA dehydrogenase domain protein YP_003671476.1 PFAM: regulatory protein TetR; KEGG: gyc:GYMC61_2438 TetR family transcriptional regulator YP_003671477.1 KEGG: gyc:GYMC61_2437 hypothetical protein YP_003671478.1 KEGG: gyc:GYMC61_2436 hypothetical protein YP_003671479.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_2435 GCN5-related N-acetyltransferase YP_003671480.1 KEGG: gyc:GYMC61_2434 hypothetical protein YP_003671481.1 KEGG: gyc:GYMC61_2432 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein YP_003671482.1 PFAM: threonyl/alanyl tRNA synthetase SAD; Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; KEGG: gyc:GYMC61_2431 threonyl/alanyl tRNA synthetase SAD YP_003671483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gka:GK1590 hypothetical protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003671484.1 KEGG: gka:GK1589 multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003671485.1 PFAM: protein of unknown function DUF1028; peptidoglycan binding; KEGG: gka:GK1588 hypothetical protein YP_003671486.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_2427 hypothetical protein YP_003671487.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_2426 hypothetical protein YP_003671488.1 KEGG: gyc:GYMC61_2425 RarD protein, DMT superfamily transporter; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane YP_003671489.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_2426 hypothetical protein YP_003671490.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: gyc:GYMC61_2424 Mg2 transporter protein CorA family protein YP_003671491.1 KEGG: gyc:GYMC61_2423 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003671492.1 PFAM: methyltransferase type 11; KEGG: gyc:GYMC61_2422 methyltransferase type 11 YP_003671493.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: gyc:GYMC61_2421 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin YP_003671494.1 KEGG: gyc:GYMC61_2420 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1 YP_003671495.1 KEGG: gyc:GYMC61_2419 hypothetical protein YP_003671496.1 KEGG: gyc:GYMC61_2418 hypothetical protein YP_003671497.1 KEGG: gtn:GTNG_1425 hypothetical protein YP_003671498.1 KEGG: gka:GK1576 hypothetical protein YP_003671499.1 KEGG: gyc:GYMC61_2415 hypothetical protein YP_003671500.1 PFAM: protein of unknown function DUF2515; KEGG: gka:GK1574 hypothetical protein YP_003671501.1 KEGG: gyc:GYMC61_2413 hypothetical protein YP_003671502.1 KEGG: gyc:GYMC61_2412 hypothetical protein YP_003671503.1 KEGG: gyc:GYMC61_2411 hypothetical protein YP_003671504.1 PFAM: protein of unknown function DUF1250; KEGG: gyc:GYMC61_2410 protein of unknown function DUF1250 YP_003671505.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: gyc:GYMC61_2409 biotin synthase; PFAM: biotin and thiamin synthesis associated; radical SAM protein YP_003671506.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: gyc:GYMC61_2406 Mg2 transporter protein CorA family protein YP_003671507.1 KEGG: gyc:GYMC61_2405 hypothetical protein YP_003671508.1 PFAM: HesB/YadR/YfhF-family protein; KEGG: gyc:GYMC61_2404 HesB/YadR/YfhF-family protein YP_003671509.1 PFAM: thioesterase superfamily protein; KEGG: gyc:GYMC61_2403 thioesterase superfamily protein YP_003671510.1 KEGG: gyc:GYMC61_2402 hypothetical protein YP_003671511.1 PFAM: thioesterase superfamily protein; KEGG: gyc:GYMC61_2401 thioesterase superfamily protein YP_003671512.1 TIGRFAM: small, acid-soluble spore protein tlp; KEGG: gyc:GYMC61_2400 small, acid-soluble spore protein tlp YP_003671513.1 PFAM: small acid-soluble spore N family protein; KEGG: gyc:GYMC61_2399 small acid-soluble spore N family protein YP_003671514.1 KEGG: gyc:GYMC61_2398 hypothetical protein YP_003671515.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: gyc:GYMC61_2397 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003671516.1 KEGG: gyc:GYMC61_2396 hypothetical protein YP_003671517.1 KEGG: gyc:GYMC61_2395 rhodanese domain protein; PFAM: rhodanese; SMART: rhodanese YP_003671518.1 PFAM: protein of unknown function DUF2533; KEGG: gyc:GYMC61_2394 protein of unknown function DUF2533 YP_003671519.1 KEGG: gka:GK1554 hypothetical protein YP_003671520.1 KEGG: gyc:GYMC61_2392 dynamin family protein; manually curated; PFAM: Dynamin family protein YP_003671521.1 PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: gka:GK1552 hypothetical protein YP_003671522.1 PFAM: chalcone and stilbene synthase domain protein; KEGG: gyc:GYMC61_2390 chalcone and stilbene synthase domain protein YP_003671523.1 KEGG: gka:GK1550 hypothetical protein YP_003671524.1 KEGG: gyc:GYMC61_2388 xanthine permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease YP_003671525.1 KEGG: gyc:GYMC61_2387 xanthine phosphoribosyltransferase; TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003671526.1 KEGG: gyc:GYMC61_2386 hypothetical protein YP_003671527.1 PFAM: cytochrome C oxidase subunit II; KEGG: gyc:GYMC61_2385 cytochrome C oxidase subunit II YP_003671528.1 PFAM: cytochrome C oxidase subunit I; KEGG: gyc:GYMC61_2384 cytochrome C oxidase subunit I YP_003671529.1 KEGG: gyc:GYMC61_2383 carboxypeptidase Taq; PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase YP_003671530.1 SMART: helicase c2; KEGG: gka:GK1544 ATP-dependent helicase YP_003671531.1 KEGG: gyc:GYMC61_2381 RNA methylase; PFAM: RNA methylase YP_003671532.1 KEGG: gyc:GYMC61_2379 DivIVA domain protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein YP_003671533.1 KEGG: gyc:GYMC61_2378 hypothetical protein YP_003671534.1 KEGG: gyc:GYMC61_2376 hypothetical protein YP_003671535.1 KEGG: gyc:GYMC61_2375 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase; helicase; protein of unknown function DUF1998; SMART: DEAD-like helicase ; helicase domain protein YP_003671536.1 KEGG: gyc:GYMC61_2373 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003671537.1 PFAM: fumarylacetoacetate hydrolase; Domain of unknown function DUF2437; KEGG: gka:GK1535 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase YP_003671538.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: gyc:GYMC61_2371 malate dehydrogenase (oxaloacetate-decarboxylating) YP_003671539.1 TIGRFAM: malate synthase G; KEGG: gyc:GYMC61_2370 malate synthase G; PFAM: malate synthase family protein YP_003671540.1 PFAM: FAD linked oxidase; KEGG: gyc:GYMC61_2369 FAD linked oxidase YP_003671541.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gyc:GYMC61_2368 protein of unknown function DUF224 cysteine-rich region domain protein YP_003671542.1 PFAM: FAD linked oxidase; KEGG: gyc:GYMC61_2367 FAD linked oxidase YP_003671543.1 KEGG: gyc:GYMC61_2366 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_003671544.1 TIGRFAM: hydroxypyruvate isomerase; KEGG: gka:GK1528 hydroxypyruvate isomerase; PFAM: xylose isomerase YP_003671545.1 PFAM: regulatory protein TetR; KEGG: gtn:GTNG_1378 TetR family transcriptional regulator YP_003671546.1 KEGG: gtn:GTNG_1377 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671547.1 KEGG: gtn:GTNG_1376 ABC transporter permease YP_003671548.1 PFAM: protein of unknown function UPF0005; KEGG: gyc:GYMC61_2364 protein of unknown function UPF0005 YP_003671549.1 KEGG: gyc:GYMC61_2363 membrane protein AbrB duplication; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase YP_003671550.1 KEGG: gyc:GYMC61_2362 GCN5-related N-acetyltransferase YP_003671551.1 manually curated; TIGRFAM: cysteine synthase A; cysteine synthase; KEGG: gyc:GYMC61_2361 cysteine synthase A; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003671552.1 KEGG: gka:GK1523 histidine protein kinase; PFAM: histidine kinase-like; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003671553.1 KEGG: gyc:GYMC61_2359 hypothetical protein YP_003671554.1 KEGG: gyc:GYMC61_2358 hypothetical protein YP_003671555.1 KEGG: gyc:GYMC61_2357 hypothetical protein YP_003671556.1 KEGG: gyc:GYMC61_2356 spore coat protein YP_003671557.1 PFAM: Coat F domain protein; KEGG: gka:GK1518 spore coat protein YP_003671558.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gyc:GYMC61_2354 peptidase S8 and S53 subtilisin kexin sedolisin YP_003671559.1 PFAM: protein of unknown function DUF161; KEGG: gyc:GYMC61_2353 protein of unknown function DUF161 YP_003671560.1 KEGG: gyc:GYMC61_2352 twin-arginine translocation protein, TatA/E family subunit; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003671561.1 KEGG: gyc:GYMC61_2351 small acid-soluble spore protein, H-type; TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein YP_003671562.1 KEGG: gyc:GYMC61_2350 hypothetical protein YP_003671563.1 PFAM: acyltransferase 3; KEGG: gyc:GYMC61_2348 acyltransferase 3 YP_003671564.1 KEGG: gyc:GYMC61_2347 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003671565.1 KEGG: gyc:GYMC61_2346 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_003671566.1 manually curated; KEGG: gyc:GYMC61_2345 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase YP_003671567.1 PFAM: glycosyl transferase family 2; KEGG: gyc:GYMC61_2344 glycosyl transferase family 2 YP_003671568.1 KEGG: gyc:GYMC61_2343 hypothetical protein YP_003671569.1 KEGG: gyc:GYMC61_2342 aryldialkylphosphatase; PFAM: aryldialkylphosphatase YP_003671570.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_2341 AMP-dependent synthetase and ligase YP_003671571.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gyc:GYMC61_2340 haloacid dehalogenase domain protein hydrolase YP_003671572.1 PFAM: Excalibur domain protein; KEGG: bld:BLi04157 YhjA YP_003671573.1 PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; KEGG: afl:Aflv_1287 hypothetical protein YP_003671574.1 PFAM: LamB/YcsF family protein; KEGG: gyc:GYMC61_2338 LamB/YcsF family protein YP_003671575.1 SMART: allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase; KEGG: gka:GK1501 hypothetical protein; PFAM: allophanate hydrolase subunit 2 YP_003671576.1 KEGG: gyc:GYMC61_2336 allophanate hydrolase subunit 1; PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1 YP_003671577.1 KEGG: gka:GK1499 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003671578.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1498 hypothetical protein YP_003671579.1 KEGG: gyc:GYMC61_2333 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031 YP_003671580.1 KEGG: gyc:GYMC61_2332 hypothetical protein YP_003671581.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: gyc:GYMC61_2331 thiol-disulphide oxidoreductase DCC YP_003671582.1 PFAM: protein of unknown function DUF159; KEGG: gyc:GYMC61_2330 protein of unknown function DUF159 YP_003671583.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: gyc:GYMC61_2326 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver YP_003671584.1 PFAM: alpha/beta hydrolase fold; KEGG: gyc:GYMC61_2325 hypothetical protein YP_003671585.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gka:GK1492 hypothetical protein YP_003671586.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_2323 AMP-dependent synthetase and ligase YP_003671587.1 KEGG: gka:GK1490 transcriptional regulator (mercuric resistance operon regulatory protein); PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_003671588.1 PFAM: protein of unknown function DUF990; KEGG: gyc:GYMC61_2321 protein of unknown function DUF990 YP_003671589.1 PFAM: protein of unknown function DUF990; KEGG: gka:GK1488 hypothetical protein YP_003671590.1 KEGG: gka:GK1487 hypothetical protein; PFAM: ABC transporter related; SMART: ATPase AAA YP_003671591.1 KEGG: gka:GK1486 hypothetical protein YP_003671592.1 KEGG: gyc:GYMC61_2306 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671593.1 PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_0195 inner-membrane translocator YP_003671594.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_2303 inner-membrane translocator YP_003671595.1 PFAM: extracellular ligand-binding receptor; KEGG: gyc:GYMC61_2302 extracellular ligand-binding receptor YP_003671596.1 KEGG: gyc:GYMC61_2317 hypothetical protein YP_003671597.1 PFAM: cupin; KEGG: gyc:GYMC61_2315 cupin 2 conserved barrel domain protein YP_003671598.1 KEGG: gyc:GYMC61_2314 hypothetical protein YP_003671599.1 KEGG: gyc:GYMC61_2313 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate hydrolase YP_003671600.1 PFAM: thioesterase superfamily protein; KEGG: gyc:GYMC61_2312 thioesterase superfamily protein YP_003671601.1 PFAM: monooxygenase FAD-binding; KEGG: gyc:GYMC61_2311 monooxygenase FAD-binding protein YP_003671602.1 KEGG: gyc:GYMC61_2310 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003671603.1 KEGG: gyc:GYMC61_2309 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003671604.1 KEGG: gyc:GYMC61_2308 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003671605.1 PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_2307 aldehyde dehydrogenase YP_003671606.1 KEGG: gyc:GYMC61_2306 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671607.1 KEGG: gyc:GYMC61_2305 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671608.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_2304 inner-membrane translocator YP_003671609.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_2303 inner-membrane translocator YP_003671610.1 PFAM: extracellular ligand-binding receptor; KEGG: gyc:GYMC61_2302 extracellular ligand-binding receptor YP_003671611.1 PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: gyc:GYMC61_2301 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003671612.1 KEGG: gyc:GYMC61_2300 4-oxalocrotonate tautomerase family enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_003671613.1 KEGG: gyc:GYMC61_2299 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate hydrolase YP_003671614.1 KEGG: gyc:GYMC61_2298 4-hydroxy-2-oxovalerate aldolase; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein YP_003671615.1 TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: gyc:GYMC61_2297 acetaldehyde dehydrogenase (acetylating); PFAM: acetaldehyde dehydrogenase ; semialdehyde dehydrogenase NAD - binding YP_003671616.1 KEGG: gyc:GYMC61_2296 2-oxopent-4-enoate hydratase; PFAM: fumarylacetoacetate hydrolase YP_003671617.1 KEGG: gyc:GYMC61_2295 2-hydroxymuconic semialdehyde dehydrogenase; TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003671618.1 KEGG: gyc:GYMC61_2294 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003671619.1 PFAM: amidohydrolase; KEGG: gyc:GYMC61_2293 amidohydrolase YP_003671620.1 KEGG: gyc:GYMC61_2292 hypothetical protein YP_003671621.1 PFAM: monooxygenase FAD-binding; KEGG: gyc:GYMC61_2290 monooxygenase FAD-binding protein YP_003671622.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_2289 major facilitator superfamily MFS_1 YP_003671623.1 KEGG: gyc:GYMC61_2288 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate hydrolase YP_003671624.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_2287 AMP-dependent synthetase and ligase YP_003671625.1 PFAM: cupin; KEGG: gyc:GYMC61_2286 cupin 2 conserved barrel domain protein YP_003671626.1 KEGG: gyc:GYMC61_2285 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003671627.1 KEGG: gyc:GYMC61_2284 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003671628.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_2283 AMP-dependent synthetase and ligase YP_003671629.1 manually curated; KEGG: gyc:GYMC61_2282 hypothetical protein YP_003671630.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_2281 major facilitator superfamily MFS_1 YP_003671631.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_2280 enoyl-CoA hydratase/isomerase YP_003671632.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_2279 3-hydroxybutyryl-CoA dehydrogenase YP_003671633.1 KEGG: gyc:GYMC61_2278 PucR family transcriptional regulator; PFAM: GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein YP_003671634.1 KEGG: gyc:GYMC61_2277 acetoacetyl-CoA synthase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase YP_003671635.1 PFAM: FeoA family protein; KEGG: gyc:GYMC61_2276 FeoA family protein YP_003671636.1 KEGG: gyc:GYMC61_2275 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transporter B domain protein YP_003671637.1 PFAM: Ferrous iron transport B domain protein; nucleoside recognition domain protein; Ferrous iron transporter B domain protein; KEGG: gyc:GYMC61_2274 ferrous iron transport B domain protein YP_003671638.1 PFAM: phosphoglycerate mutase; KEGG: gyc:GYMC61_2273 phosphoglycerate mutase YP_003671639.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: gwc:GWCH70_1976 peptidase U61 LD-carboxypeptidase A YP_003671640.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_2271 GCN5-related N-acetyltransferase YP_003671641.1 KEGG: gyc:GYMC61_2270 hypothetical protein YP_003671642.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: gka:GK1463 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein YP_003671643.1 KEGG: gyc:GYMC61_2268 hypothetical protein YP_003671644.1 KEGG: gyc:GYMC61_2267 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671645.1 PFAM: transporter permease; KEGG: gyc:GYMC61_2266 transporter permease YP_003671646.1 PFAM: transporter permease; KEGG: gyc:GYMC61_2265 transporter permease YP_003671647.1 PFAM: periplasmic binding protein; KEGG: gyc:GYMC61_2264 periplasmic binding protein YP_003671648.1 KEGG: gyc:GYMC61_2251 hypothetical protein YP_003671649.1 KEGG: gyc:GYMC61_2250 exonuclease RNase T and DNA polymerase III; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease YP_003671650.1 PFAM: protein of unknown function DUF294 nucleotidyltransferase ; Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; KEGG: gyc:GYMC61_2249 protein of unknown function DUF294 nucleotidyltransferase YP_003671651.1 KEGG: gka:GK1452 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003671653.1 KEGG: gyc:GYMC61_2247 hypothetical protein YP_003671654.1 KEGG: gyc:GYMC61_2246 hypothetical protein YP_003671655.1 KEGG: gyc:GYMC61_2245 hypothetical protein YP_003671656.1 PFAM: protein of unknown function DUF2512; KEGG: gyc:GYMC61_2244 protein of unknown function DUF2512 YP_003671657.1 PFAM: toxic anion resistance family protein; KEGG: gyc:GYMC61_2243 toxic anion resistance family protein YP_003671658.1 PFAM: 5-bromo-4-chloroindolyl phosphate hydrolysis protein; KEGG: gyc:GYMC61_2242 5-bromo-4-chloroindolyl phosphate hydrolysis protein YP_003671659.1 KEGG: gyc:GYMC61_2241 hypothetical protein YP_003671660.1 KEGG: gyc:GYMC61_2239 hypothetical protein YP_003671661.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_2238 major facilitator superfamily MFS_1 YP_003671662.1 PFAM: SCP-like extracellular; KEGG: gyc:GYMC61_2237 SCP-like extracellular YP_003671663.1 KEGG: gyc:GYMC61_2236 glycoside hydrolase family 38 YP_003671664.1 PFAM: sugar isomerase (SIS); KEGG: gyc:GYMC61_2233 hypothetical protein YP_003671665.1 PFAM: malic protein NAD-binding; malic protein domain protein; amino acid-binding ACT domain protein; KEGG: gka:GK1440 malic enzyme YP_003671666.1 KEGG: gyc:GYMC61_2231 intracellular protease PfpI family; TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein YP_003671667.1 PFAM: silent information regulator protein Sir2; KEGG: gyc:GYMC61_2230 silent information regulator protein Sir2 YP_003671668.1 PFAM: fructosamine/ketosamine-3-kinase; KEGG: gyc:GYMC61_2229 fructosamine/ketosamine-3-kinase YP_003671669.1 PFAM: protein of unknown function DUF2157, membrane; KEGG: gyc:GYMC61_2228 protein of unknown function DUF2157, membrane YP_003671670.1 PFAM: M penetrans paralogue 2 domain protein; KEGG: gyc:GYMC61_2227 hypothetical protein YP_003671671.1 KEGG: gyc:GYMC61_2226 phosphoesterase PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003671672.1 KEGG: gyc:GYMC61_2225 glutamate synthase, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003671673.1 KEGG: gyc:GYMC61_2224 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein YP_003671674.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gka:GK1430 LysR family transcriptional regulator YP_003671675.1 KEGG: gka:GK1429 hypothetical protein; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_003671676.1 PFAM: protein of unknown function DUF820; KEGG: gka:GK1428 hypothetical protein YP_003671677.1 PFAM: aminotransferase class-III; KEGG: gyc:GYMC61_2218 aminotransferase class-III YP_003671678.1 PFAM: purine catabolism PurC domain protein; KEGG: gtn:GTNG_1285 regulatory protein YP_003671679.1 KEGG: gtn:GTNG_1284 gamma-aminobutyrate permease; TIGRFAM: GABA permease; PFAM: amino acid permease-associated region YP_003671680.1 KEGG: gka:GK1417 hypothetical protein YP_003671681.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: gka:GK1416 type III restriction-modification system, methyltransferase YP_003671682.1 KEGG: gyc:GYMC61_2207 ATPase AAA YP_003671683.1 KEGG: gka:GK1414 hypothetical protein YP_003671684.1 PFAM: periplasmic binding protein; KEGG: gtn:GTNG_1275 ferric anguibactin-binding protein precursor YP_003671685.1 KEGG: gtn:GTNG_1274 ferrichrome ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671686.1 PFAM: transporter permease; KEGG: gtn:GTNG_1273 ferrichrome ABC transporter permease YP_003671687.1 PFAM: transporter permease; KEGG: gtn:GTNG_1272 ferrichrome ABC transporter permease YP_003671688.1 PFAM: aldehyde dehydrogenase; KEGG: gka:GK1411 aldehyde dehydrogenase YP_003671689.1 TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; KEGG: gyc:GYMC61_2201 sulfite reductase (NADPH) hemoprotein, beta-component; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_003671690.1 KEGG: gka:GK1409 sulfite reductase flavoprotein subunit; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein YP_003671691.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gka:GK1408 LysR family transcriptional regulator YP_003671692.1 KEGG: gka:GK1407 cation efflux transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003671693.1 KEGG: gka:GK1406 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003671695.1 PFAM: protein of unknown function DUF74; KEGG: gyc:GYMC61_2196 protein of unknown function DUF74 YP_003671696.1 KEGG: gka:GK1402 hypothetical protein YP_003671697.1 KEGG: gyc:GYMC61_2193 beta-lactamase YP_003671698.1 PFAM: FAD dependent oxidoreductase; KEGG: gyc:GYMC61_2192 FAD dependent oxidoreductase YP_003671699.1 PFAM: protein of unknown function UPF0302 ; conserved hypothetical protein; KEGG: gyc:GYMC61_2191 protein of unknown function UPF0302 YP_003671700.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: gyc:GYMC61_2189 malate/quinone oxidoreductase; PFAM: malate:quinone-oxidoreductase YP_003671701.1 KEGG: gyc:GYMC61_2188 hypothetical protein YP_003671702.1 KEGG: gka:GK1392 glutamyl-tRNA(Gln) amidotransferase subunit A; PFAM: amidase YP_003671703.1 KEGG: gyc:GYMC61_2185 hypothetical protein YP_003671704.1 PFAM: acetamidase/Formamidase; KEGG: gka:GK1391 acetamidase/formamidase YP_003671705.1 PFAM: restriction endonuclease; KEGG: gka:GK1390 hypothetical protein YP_003671706.1 KEGG: gyc:GYMC61_2181 hypothetical protein YP_003671707.1 KEGG: gyc:GYMC61_2180 type III site-specific deoxyribonuclease; PFAM: type III restriction protein res subunit YP_003671708.1 KEGG: gyc:GYMC61_2179 site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase N-4/N-6 domain protein YP_003671709.1 KEGG: gyc:GYMC61_2178 hypothetical protein YP_003671710.1 KEGG: gyc:GYMC61_2176 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003671711.1 manually curated; KEGG: gyc:GYMC61_2175 hypothetical protein YP_003671712.1 PFAM: Domain of unknown function DUF2357; protein of unknown function DUF524; KEGG: gka:GK1379 hypothetical protein YP_003671713.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: gyc:GYMC61_2172 ATPase associated with various cellular activities AAA_5 YP_003671714.1 PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: gyc:GYMC61_2171 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003671715.1 KEGG: gyc:GYMC61_2169 hypothetical protein YP_003671716.1 KEGG: gyc:GYMC61_2168 protein of unknown function DUF955; PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003671717.1 PFAM: SEC-C motif domain protein; KEGG: gyc:GYMC61_2167 sec-C motif domain protein YP_003671718.1 KEGG: gyc:GYMC61_2166 hypothetical protein YP_003671719.1 PFAM: indigoidine synthase A family protein; KEGG: gyc:GYMC61_2165 indigoidine synthase A family protein YP_003671720.1 KEGG: gyc:GYMC61_1508 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003671721.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: gyc:GYMC61_2163 protein of unknown function DUF395 YeeE/YedE YP_003671722.1 KEGG: gka:GK1370 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_003671723.1 PFAM: nucleoside recognition domain protein; KEGG: gyc:GYMC61_2161 nucleoside recognition domain protein YP_003671724.1 KEGG: gyc:GYMC61_2160 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase YP_003671725.1 TIGRFAM: urocanate hydratase; KEGG: gyc:GYMC61_2159 urocanate hydratase; PFAM: Urocanase YP_003671726.1 KEGG: gka:GK1366 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003671727.1 KEGG: gyc:GYMC61_2157 formiminoglutamase; TIGRFAM: formiminoglutamase; PFAM: arginase/agmatinase/formiminoglutamase YP_003671728.1 PFAM: thioesterase superfamily protein; KEGG: gyc:GYMC61_2156 thioesterase superfamily protein YP_003671729.1 PFAM: thioesterase superfamily protein; KEGG: gyc:GYMC61_2155 thioesterase superfamily protein YP_003671730.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gyc:GYMC61_2154 glyoxalase/bleomycin resistance protein/dioxygenase YP_003671731.1 KEGG: gyc:GYMC61_2153 hypothetical protein YP_003671732.1 PFAM: extracellular solute-binding protein family 5; KEGG: gwc:GWCH70_1273 extracellular solute-binding protein family 5 YP_003671733.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gwc:GWCH70_1272 binding-protein-dependent transport systems inner membrane component YP_003671734.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gwc:GWCH70_1271 binding-protein-dependent transport systems inner membrane component YP_003671735.1 KEGG: gwc:GWCH70_1270 ABC transporter; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003671736.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; KEGG: gwc:GWCH70_1269 oligopeptide/dipeptide ABC transporter ATPase; SMART: ATPase AAA YP_003671737.1 KEGG: gyc:GYMC61_2150 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY-like YP_003671738.1 KEGG: gyc:GYMC61_2149 MIP family channel protein; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_003671739.1 PFAM: SpoOM family protein; KEGG: gyc:GYMC61_2148 SpoOM family protein YP_003671740.1 KEGG: gyc:GYMC61_2147 hypothetical protein YP_003671741.1 KEGG: gyc:GYMC61_2146 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003671742.1 KEGG: gka:GK1354 hypothetical protein YP_003671743.1 PFAM: protein of unknown function DUF2602; KEGG: gka:GK1352 hypothetical protein YP_003671744.1 PFAM: ribonuclease H; KEGG: gka:GK1351 hypothetical protein YP_003671745.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gka:GK1350 hypothetical protein YP_003671746.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: gka:GK1349 hypothetical protein YP_003671747.1 TIGRFAM: small, acid-soluble spore protein L; KEGG: gka:GK1348 hypothetical protein YP_003671748.1 KEGG: gyc:GYMC61_2141 aconitate hydratase 1; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein YP_003671749.1 KEGG: gyc:GYMC61_2140 small, acid-soluble spore protein O; TIGRFAM: small, acid-soluble spore protein O; PFAM: small acid-soluble spore O family protein YP_003671750.1 KEGG: gka:GK1345 hypothetical protein YP_003671751.1 PFAM: small acid-soluble spore P family protein; KEGG: gyc:GYMC61_2138 small acid-soluble spore P family protein YP_003671752.1 KEGG: gyc:GYMC61_2137 PTS system, lactose-specific IIa component; TIGRFAM: PTS system, lactose-specific IIa component; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha YP_003671753.1 PFAM: YdjC family protein; KEGG: gyc:GYMC61_2136 YdjC family protein YP_003671754.1 TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: gyc:GYMC61_2135 PTS system, cellobiose-specific IIC subunit; PFAM: phosphotransferase system EIIC YP_003671755.1 TIGRFAM: PTS system, lactose/cellobiose family IIB subunit; KEGG: gyc:GYMC61_2134 PTS system, lactose/cellobiose family IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit YP_003671756.1 KEGG: gyc:GYMC61_2133 PTS system transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; PRD domain protein; PTS system fructose subfamily IIA component; SMART: AAA ATPase YP_003671757.1 KEGG: gyc:GYMC61_2132 cell wall hydrolase SleB; PFAM: cell wall hydrolase SleB; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003671758.1 KEGG: gyc:GYMC61_2131 hypothetical protein YP_003671759.1 PFAM: protein of unknown function DUF1453; KEGG: gyc:GYMC61_2130 protein of unknown function DUF1453 YP_003671760.1 KEGG: gyc:GYMC61_2129 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003671761.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: gka:GK1339 cytochrome C biogenesis protein YP_003671762.1 PFAM: sporulation stage 0, Spo0E-like regulatory phosphatase; KEGG: gyc:GYMC61_2127 sporulation stage 0, Spo0E-like regulatory phosphatase YP_003671763.1 KEGG: gyc:GYMC61_2126 ABC transporter protein; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA YP_003671764.1 KEGG: gyc:GYMC61_2125 ABC transporter protein; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA YP_003671765.1 PFAM: protein of unknown function UPF0154; KEGG: gyc:GYMC61_2124 protein of unknown function UPF0154 YP_003671766.1 PFAM: protein of unknown function DUF2522; KEGG: gyc:GYMC61_2123 hypothetical protein YP_003671767.1 KEGG: gka:GK1332 transketolase; TIGRFAM: transketolase; PFAM: transketolase; transketolase central region YP_003671768.1 PFAM: protein of unknown function DUF896; KEGG: gyc:GYMC61_2121 protein of unknown function DUF896 YP_003671769.1 PFAM: Resolvase domain; KEGG: gyc:GYMC61_2120 resolvase domain protein YP_003671770.1 KEGG: gyc:GYMC61_2119 peptidoglycan-binding lysin domain protein; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003671771.1 KEGG: gyc:GYMC61_2118 transcriptional repressor, LexA family; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24/S26A/S26B, conserved region YP_003671772.1 KEGG: gyc:GYMC61_2117 glutamine synthetase, type I; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003671773.1 KEGG: gka:GK1326 transcriptional repressor of glutamine synthetase; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003671774.1 PFAM: aluminum resistance protein; KEGG: gyc:GYMC61_2115 aluminium resistance family protein YP_003671775.1 KEGG: gka:GK1324 GTP-binding protein protease modulator; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related YP_003671776.1 PFAM: protein of unknown function UPF0126; KEGG: gyc:GYMC61_2113 protein of unknown function UPF0126 YP_003671777.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gyc:GYMC61_2111 protein of unknown function DUF6 transmembrane YP_003671778.1 PFAM: protein of unknown function DUF820; KEGG: gka:GK1321 hypothetical protein YP_003671779.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: gka:GK1320 beta-ketothiolase (3-ketoacyl-CoA thiolase) YP_003671780.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_2109 3-hydroxybutyryl-CoA dehydrogenase YP_003671781.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_2108 AMP-dependent synthetase and ligase YP_003671782.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gka:GK1317 acyl-CoA transferase/carnitine dehydratase YP_003671783.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_2106 acyl-CoA dehydrogenase domain protein YP_003671784.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_2105 AMP-dependent synthetase and ligase YP_003671785.1 TIGRFAM: stage V sporulation protein K; PFAM: ATPase AAA central domain protein; KEGG: gyc:GYMC61_2104 stage V sporulation protein K; SMART: ATPase AAA YP_003671786.1 KEGG: gyc:GYMC61_2103 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003671787.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: gka:GK1312 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003671788.1 KEGG: gyc:GYMC61_2101 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003671789.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_2100 major facilitator superfamily MFS_1 YP_003671790.1 KEGG: gyc:GYMC61_2098 choline/carnitine/betaine transporter; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_003671791.1 KEGG: gyc:GYMC61_2097 NLP/P60 protein; PFAM: NLP/P60 protein; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003671792.1 KEGG: gka:GK1307 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_003671793.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS; MutS II domain protein; MutS IV domain protein; KEGG: gyc:GYMC61_2095 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS; MutS III domain protein YP_003671794.1 PFAM: Spore coat protein CotE; KEGG: gka:GK1305 outer spore coat protein YP_003671795.1 PFAM: protein of unknown function DUF1333; KEGG: gyc:GYMC61_2093 protein of unknown function DUF1333 YP_003671796.1 TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; radical SAM protein; deoxyribonuclease/rho motif-related TRAM; KEGG: gka:GK1303 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_003671797.1 KEGG: gyc:GYMC61_2091 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate protein domain protein TPP-binding YP_003671798.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate/ketoisovalerate oxidoreductase; KEGG: gyc:GYMC61_2090 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_003671799.1 KEGG: gyc:GYMC61_2089 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase YP_003671800.1 PFAM: stage V sporulation protein S; KEGG: gyc:GYMC61_2088 stage V sporulation protein S YP_003671801.1 PFAM: metallophosphoesterase; KEGG: gyc:GYMC61_2087 metallophosphoesterase YP_003671802.1 TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; KEGG: gka:GK1297 phosphodiesterase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_003671803.1 PFAM: protein of unknown function UPF0236; KEGG: gka:GK1016 hypothetical protein YP_003671804.1 KEGG: gwc:GWCH70_1190 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein YP_003671805.1 PFAM: RecA domain protein; KEGG: gka:GK1295 hypothetical protein YP_003671806.1 KEGG: gyc:GYMC61_2080 competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain YP_003671807.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: gyc:GYMC61_2079 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003671808.1 SMART: helix-turn-helix domain protein; KEGG: gyc:GYMC61_2078 XRE family transcriptional regulator YP_003671809.1 PFAM: amino acid-binding ACT domain protein; KEGG: gyc:GYMC61_2077 amino acid-binding ACT domain protein YP_003671810.1 KEGG: gyc:GYMC61_2075 hypothetical protein YP_003671811.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_2074 short-chain dehydrogenase/reductase SDR YP_003671812.1 PFAM: peptidase M16 domain protein; KEGG: gyc:GYMC61_2073 peptidase M16 domain protein YP_003671813.1 PFAM: peptidase M16 domain protein; KEGG: gyc:GYMC61_2072 peptidase M16 domain protein YP_003671814.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_2071 inner-membrane translocator YP_003671815.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_2070 inner-membrane translocator YP_003671816.1 KEGG: gka:GK1284 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003671817.1 PFAM: basic membrane lipoprotein; KEGG: gyc:GYMC61_2068 basic membrane lipoprotein YP_003671818.1 KEGG: gyc:GYMC61_2067 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003671819.1 KEGG: gka:GK1281 DNA translocase (stage III sporulation protein E); PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: ATPase AAA YP_003671820.1 KEGG: gyc:GYMC61_2065 hypothetical protein YP_003671821.1 PFAM: peptidase S14 ClpP; KEGG: gka:GK1279 hypothetical protein YP_003671822.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: gka:GK1278 hypothetical protein YP_003671823.1 KEGG: gyc:GYMC61_2062 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003671824.1 KEGG: gyc:GYMC61_2061 aspartate kinase, monofunctional class; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003671825.1 KEGG: gyc:GYMC61_2060 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding YP_003671826.1 KEGG: gyc:GYMC61_2059 dipicolinic acid synthetase, B subunit; TIGRFAM: dipicolinic acid synthetase subunit beta; PFAM: flavoprotein YP_003671827.1 KEGG: gyc:GYMC61_2058 dipicolinic acid synthetase, A subunit; TIGRFAM: dipicolinic acid synthetase, subunit alpha; PFAM: alanine dehydrogenase/PNT domain protein YP_003671828.1 KEGG: gyc:GYMC61_2057 sporulation protein, YlmC/YmxH family; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein YP_003671829.1 PFAM: peptidase M16 domain protein; KEGG: gka:GK1271 processing protease YP_003671830.1 KEGG: gyc:GYMC61_2055 sporulation protein, polysaccharide deacetylase family; TIGRFAM: sporulation protein, polysaccharide deacetylase family; PFAM: polysaccharide deacetylase YP_003671831.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: gyc:GYMC61_2053 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_003671832.1 KEGG: gyc:GYMC61_2052 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_003671833.1 KEGG: gyc:GYMC61_2051 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; riboflavin kinase YP_003671834.1 KEGG: gyc:GYMC61_2050 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_003671835.1 KEGG: gyc:GYMC61_2049 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_003671836.1 PFAM: protein of unknown function DUF503; KEGG: gyc:GYMC61_2048 protein of unknown function DUF503 YP_003671837.1 KEGG: gyc:GYMC61_2047 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein YP_003671838.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: gyc:GYMC61_2046 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_003671839.1 PFAM: protein of unknown function DUF448; KEGG: gyc:GYMC61_2045 protein of unknown function DUF448 YP_003671840.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; KEGG: gyc:GYMC61_2044 NusA antitermination factor; SMART: KH domain protein YP_003671841.1 PFAM: protein of unknown function DUF150; KEGG: gyc:GYMC61_2043 protein of unknown function DUF150 YP_003671842.1 TIGRFAM: DNA polymerase III subunit alpha; DNA polymerase III, subunit epsilon; PFAM: DNA polymerase III subunit alpha; exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gka:GK1258 DNA polymerase III PolC; SMART: exonuclease; phosphoesterase PHP domain protein YP_003671843.1 KEGG: gyc:GYMC61_2041 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; anticodon-binding domain protein YP_003671844.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: gyc:GYMC61_2040 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein YP_003671845.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: gyc:GYMC61_2039 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003671846.1 PFAM: phosphatidate cytidylyltransferase; KEGG: gyc:GYMC61_2038 phosphatidate cytidylyltransferase YP_003671847.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: gyc:GYMC61_2037 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003671848.1 KEGG: gyc:GYMC61_2036 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_003671849.1 TIGRFAM: uridylate kinase; KEGG: gyc:GYMC61_2035 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003671850.1 KEGG: gyc:GYMC61_2034 translation elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_003671851.1 KEGG: gyc:GYMC61_2033 ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_003671852.1 KEGG: gyc:GYMC61_2032 hypothetical protein YP_003671853.1 KEGG: gyc:GYMC61_2031 hypothetical protein YP_003671854.1 KEGG: gka:GK1246 RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_003671855.1 PFAM: CheD family protein; KEGG: gyc:GYMC61_2029 CheD, stimulates methylation of MCP protein YP_003671856.1 PFAM: CheC domain protein; KEGG: gyc:GYMC61_2028 CheC, inhibitor of MCP methylation YP_003671857.1 KEGG: gka:GK1243 chemotaxis signal transduction protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_003671858.1 KEGG: gyc:GYMC61_2026 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; P2 response regulator binding domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_003671859.1 KEGG: gyc:GYMC61_2025 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver YP_003671860.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: gyc:GYMC61_2024 cobyrinic acid ac-diamide synthase YP_003671861.1 TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: gyc:GYMC61_2023 flagellar biosynthetic protein FlhF; SMART: ATPase AAA YP_003671862.1 KEGG: gka:GK1238 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_003671863.1 KEGG: gka:GK1237 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_003671864.1 KEGG: gyc:GYMC61_2020 flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_003671865.1 KEGG: gyc:GYMC61_2019 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_003671866.1 KEGG: gyc:GYMC61_2018 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_003671867.1 PFAM: flagellar biosynthesis protein FliO; KEGG: gyc:GYMC61_2017 flagellar biosynthesis protein FliO YP_003671868.1 KEGG: gyc:GYMC61_2016 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003671869.1 KEGG: gyc:GYMC61_2015 CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein YP_003671870.1 KEGG: gyc:GYMC61_2014 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_003671871.1 PFAM: flagellar basal body-associated protein FliL; KEGG: gyc:GYMC61_2013 flagellar basal body-associated protein FliL YP_003671872.1 PFAM: flagellar FlbD family protein; KEGG: gyc:GYMC61_2012 flagellar FlbD family protein YP_003671873.1 KEGG: gka:GK1227 flagellar basal body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003671874.1 PFAM: flagellar hook capping protein; KEGG: gka:GK1226 flagellar basal body rod modification protein YP_003671875.1 PFAM: flagellar hook-length control protein; KEGG: gyc:GYMC61_2009 flagellar hook-length control protein YP_003671876.1 PFAM: MgtE intracellular region; KEGG: gyc:GYMC61_2008 hypothetical protein YP_003671877.1 KEGG: gyc:GYMC61_2007 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein YP_003671878.1 TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; KEGG: gyc:GYMC61_2006 flagellar protein export ATPase FliI; SMART: AAA ATPase YP_003671879.1 PFAM: flagellar assembly protein FliH/type III secretion system HrpE; KEGG: gyc:GYMC61_2005 flagellar assembly protein FliH/type III secretion system HrpE YP_003671880.1 KEGG: gyc:GYMC61_2004 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; MgtE intracellular region YP_003671881.1 KEGG: gyc:GYMC61_2003 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; flagellar M-ring domain protein; protein of unknown function DUF916 cell surface YP_003671882.1 KEGG: gyc:GYMC61_2002 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_003671883.1 KEGG: gyc:GYMC61_2001 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003671884.1 KEGG: gka:GK1216 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_003671885.1 KEGG: gyc:GYMC61_1999 GTP-sensing pleiotropic transcriptional repressor CodY; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: GTP-sensing transcriptional pleiotropic repressor CodY; Helix-turn-helix CodY domain protein YP_003671886.1 TIGRFAM: heat shock protein HslVU, ATPase HslU; PFAM: ATPase AAA; Clp ATPase-like; KEGG: gyc:GYMC61_1998 heat shock protein HslVU, ATPase HslU; SMART: ATPase AAA YP_003671887.1 PFAM: 20S proteasome A and subunit betas; KEGG: gyc:GYMC61_1997 20S proteasome A and subunit betas YP_003671888.1 KEGG: gyc:GYMC61_1996 tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase; integrase domain protein SAM domain protein YP_003671889.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: gyc:GYMC61_1995 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein YP_003671890.1 KEGG: gyc:GYMC61_1994 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_003671891.1 KEGG: gyc:GYMC61_1993 succinyl-CoA synthetase, alpha subunit; TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding protein YP_003671892.1 TIGRFAM: succinyl-CoA synthetase subunit beta; KEGG: gyc:GYMC61_1992 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003671893.1 PFAM: type III secretion exporter; KEGG: gka:GK1207 hypothetical protein YP_003671894.1 KEGG: gyc:GYMC61_1990 hypothetical protein YP_003671895.1 KEGG: gka:GK1205 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_003671896.1 KEGG: gyc:GYMC61_1988 ribosome biogenesis GTP-binding protein YlqF; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related YP_003671897.1 TIGRFAM: signal peptidase I; KEGG: gyc:GYMC61_1987 signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region YP_003671898.1 KEGG: gyc:GYMC61_1986 ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_003671899.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: gka:GK1201 tRNA (guanine-N(1)-)-methyltransferase (M1G-methyltransferase); PFAM: tRNA (guanine-N1-)-methyltransferase YP_003671900.1 KEGG: gyc:GYMC61_1984 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_003671901.1 PFAM: K Homology, type 1, subgroup; KEGG: gyc:GYMC61_1980 RNA-binding protein YP_003671902.1 KEGG: gyc:GYMC61_1979 ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_003671903.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: gka:GK1196 signal recognition particle GTPase; SMART: AAA ATPase YP_003671904.1 PFAM: helix-turn-helix protein YlxM/p13 family protein; KEGG: gka:GK1195 DNA-binding protein YP_003671905.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: gyc:GYMC61_1976 signal recognition particle-docking protein FtsY; SMART: AAA ATPase YP_003671906.1 KEGG: gyc:GYMC61_1975 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein YP_003671907.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: gyc:GYMC61_1974 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_003671908.1 KEGG: gyc:GYMC61_1973 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_003671909.1 KEGG: gyc:GYMC61_1972 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003671910.1 KEGG: gyc:GYMC61_1971 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase YP_003671911.1 KEGG: gyc:GYMC61_1970 fatty acid/phospholipid synthesis protein PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_003671912.1 KEGG: gyc:GYMC61_1969 fatty acid biosynthesis transcriptional regulator protein YP_003671913.1 KEGG: gyc:GYMC61_1968 hypothetical protein YP_003671914.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; nucleic acid binding OB-fold tRNA/helicase-type; helicase; KEGG: gyc:GYMC61_1967 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase YP_003671915.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, subunit alpha; KEGG: gka:GK1185 L-serine dehydratase (L-serine deaminase) alpha chain; PFAM: serine dehydratase alpha chain YP_003671916.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, subunit beta; KEGG: gka:GK1184 L-serine dehydratase (L-serine deaminase) beta chain; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein YP_003671917.1 KEGG: gyc:GYMC61_1964 DAK2 domain fusion protein YloV; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase YP_003671918.1 PFAM: protein of unknown function DUF322; KEGG: gyc:GYMC61_1963 protein of unknown function DUF322 YP_003671919.1 KEGG: gyc:GYMC61_1962 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_003671920.1 KEGG: gyc:GYMC61_1961 stage V sporulation family protein; manually curated; PFAM: stage V sporulation family protein YP_003671921.1 TIGRFAM: thiamine pyrophosphokinase; KEGG: gyc:GYMC61_1960 thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; Thiamin pyrophosphokinase vitamin B1-binding region YP_003671922.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: gyc:GYMC61_1959 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003671923.1 KEGG: gyc:GYMC61_1958 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_003671924.1 KEGG: gyc:GYMC61_1957 serine/threonine protein kinase with PASTA sensor(s); PFAM: serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA domain containing protein YP_003671925.1 KEGG: gyc:GYMC61_1956 protein serine/threonine phosphatase; PFAM: protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein YP_003671926.1 KEGG: gka:GK1174 hypothetical protein; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: radical SAM protein YP_003671927.1 KEGG: gyc:GYMC61_1954 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_003671928.1 KEGG: gyc:GYMC61_1953 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_003671929.1 TIGRFAM: peptide deformylase; KEGG: gyc:GYMC61_1952 peptide deformylase; PFAM: formylmethionine deformylase YP_003671930.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase; helicase; KEGG: gyc:GYMC61_1951 primosomal protein N'; SMART: DEAD-like helicase ; helicase YP_003671931.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: gyc:GYMC61_1950 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_003671932.1 KEGG: gyc:GYMC61_1949 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6 YP_003671933.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: gyc:GYMC61_1948 guanylate kinase; PFAM: guanylate kinase YP_003671934.1 PFAM: protein of unknown function DUF370; KEGG: gyc:GYMC61_1947 protein of unknown function DUF370 YP_003671935.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: gyc:GYMC61_1946 YicC domain protein YP_003671936.1 KEGG: gka:GK1164 calcium-transporting ATPase; TIGRFAM: ATPase P; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase YP_003671937.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: gyc:GYMC61_1943 fibronectin-binding A domain protein YP_003671938.1 PFAM: protein of unknown function DUF820; KEGG: gka:GK1162 hypothetical protein YP_003671939.1 PFAM: PilT protein domain protein; KEGG: gyc:GYMC61_1941 PilT protein domain protein YP_003671940.1 KEGG: gka:GK1160 hypothetical protein YP_003671941.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: tte:TTE0651 cell wall biogenesis regulatory protein YP_003671942.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mag:amb0063 nucleoside-diphosphate-sugar epimerase YP_003671943.1 KEGG: tte:TTE0798 trehalose and maltose hydrolase ( phosphorylase); manually curated; PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein YP_003671944.1 KEGG: gwc:GWCH70_3432 transposase IS4 family protein YP_003671945.1 PFAM: transposase IS4 family protein; KEGG: gyc:GYMC61_3599 transposase IS4 family protein YP_003671946.1 PFAM: transposase IS4 family protein; KEGG: gyc:GYMC61_1925 transposase IS4 family protein YP_003671947.1 PFAM: transposase IS4 family protein; KEGG: gyc:GYMC61_0336 transposase IS4 family protein YP_003671948.1 KEGG: gyc:GYMC61_1933 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003671949.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_1932 major facilitator superfamily MFS_1 YP_003671950.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_1931 GCN5-related N-acetyltransferase YP_003671951.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: gyc:GYMC61_1929 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003671952.1 KEGG: gyc:GYMC61_1928 hypothetical protein YP_003671953.1 PFAM: aminotransferase class I and II; KEGG: rpb:RPB_2076 aminotransferase, class I and II YP_003671954.1 KEGG: mgm:Mmc1_1062 cytidyltransferase-like protein; TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003671955.1 PFAM: aminotransferase class-III; KEGG: cpy:Cphy_1789 glutamate-1-semialdehyde-2,1-aminomutase YP_003671956.1 PFAM: transposase IS4 family protein; KEGG: gwc:GWCH70_0577 transposase IS4 family protein YP_003671957.1 PFAM: major facilitator superfamily MFS_1; KEGG: amt:Amet_1904 major facilitator transporter YP_003671958.1 KEGG: cak:Caul_4638 hypothetical protein YP_003671959.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: gka:GK2252 transposase YP_003671960.1 KEGG: gyc:GYMC61_1921 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003671961.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: gyc:GYMC61_1920 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003671962.1 KEGG: gyc:GYMC61_1919 dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase YP_003671963.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: gka:GK1153 dihydroorotate dehydrogenase electron transfer subunit YP_003671964.1 KEGG: gka:GK1152 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_003671965.1 KEGG: gka:GK1151 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_003671966.1 TIGRFAM: dihydroorotase, multifunctional complex type; KEGG: gka:GK1150 dihydroorotase; PFAM: amidohydrolase YP_003671967.1 KEGG: gka:GK1149 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003671968.1 KEGG: gyc:GYMC61_1913 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease YP_003671969.1 manually curated; KEGG: gyc:GYMC61_1912 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003671970.1 TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: gyc:GYMC61_1911 pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_003671971.1 TIGRFAM: lipoprotein signal peptidase; KEGG: gyc:GYMC61_1910 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_003671972.1 KEGG: gyc:GYMC61_1909 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_003671973.1 KEGG: gyc:GYMC61_1908 DivIVA domain protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein YP_003671974.1 KEGG: gyc:GYMC61_1907 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003671975.1 PFAM: protein of unknown function YGGT; KEGG: gyc:GYMC61_1906 protein of unknown function YGGT YP_003671976.1 PFAM: protein of unknown function DUF552; KEGG: gyc:GYMC61_1905 protein of unknown function DUF552 YP_003671977.1 PFAM: alanine racemase domain protein; KEGG: gyc:GYMC61_1904 alanine racemase domain protein YP_003671978.1 PFAM: protein of unknown function DUF152; KEGG: gyc:GYMC61_1903 protein of unknown function DUF152 YP_003671979.1 KEGG: gyc:GYMC61_1902 sporulation protein, YlmC/YmxH family; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein YP_003671980.1 KEGG: gyc:GYMC61_1901 RNA polymerase, sigma 28 subunit, SigG; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_003671981.1 KEGG: gyc:GYMC61_1900 RNA polymerase, sigma 28 subunit, SigE; TIGRFAM: RNA polymerase sigma-E factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein YP_003671982.1 KEGG: gyc:GYMC61_1899 sigma-E processing peptidase SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA YP_003671983.1 KEGG: gyc:GYMC61_1898 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_003671984.1 KEGG: gyc:GYMC61_1897 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_003671985.1 PFAM: protein of unknown function DUF1290; KEGG: gyc:GYMC61_1896 protein of unknown function DUF1290 YP_003671986.1 PFAM: protein of unknown function DUF881; KEGG: gyc:GYMC61_1895 protein of unknown function DUF881 YP_003671987.1 PFAM: protein of unknown function DUF881; KEGG: gyc:GYMC61_1894 protein of unknown function DUF881 YP_003671988.1 PFAM: cell division protein FtsQ; polypeptide-transport-associated domain protein FtsQ-type; KEGG: gyc:GYMC61_1893 cell division protein FtsQ YP_003671989.1 KEGG: gka:GK1119 stage V sporulation protein E; TIGRFAM: stage V sporulation protein E; cell division protein FtsW; rod shape-determining protein RodA; PFAM: cell cycle protein YP_003671990.1 KEGG: gyc:GYMC61_1891 UDP-N-acetylmuramoylalanine/D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003671991.1 KEGG: gyc:GYMC61_1890 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_003671992.1 KEGG: gyc:GYMC61_1889 hypothetical protein YP_003671993.1 KEGG: gyc:GYMC61_1888 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003671994.1 SMART: PASTA domain containing protein; TIGRFAM: stage V sporulation protein D; KEGG: gyc:GYMC61_1887 stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein YP_003671995.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: gyc:GYMC61_1886 peptidoglycan glycosyltransferase; SMART: PASTA domain containing protein YP_003671996.1 KEGG: gyc:GYMC61_1885 cell division protein FtsL; TIGRFAM: cell division protein FtsL; PFAM: septum formation initiator YP_003671997.1 KEGG: gyc:GYMC61_1884 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_003671998.1 PFAM: protein of unknown function UCP012535; KEGG: gyc:GYMC61_1883 protein of unknown function UCP012535 YP_003671999.1 KEGG: gyc:GYMC61_1882 hypothetical protein YP_003672000.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: gyc:GYMC61_1881 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003672001.1 KEGG: gyc:GYMC61_1880 transcription factor, RsfA family; TIGRFAM: transcription factor, RsfA family; SMART: Myb DNA-binding domain protein YP_003672002.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: gyc:GYMC61_1879 enoyl-CoA hydratase/isomerase YP_003672003.1 KEGG: gyc:GYMC61_1878 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_003672004.1 PFAM: protein of unknown function DUF177; KEGG: gyc:GYMC61_1877 protein of unknown function DUF177 YP_003672005.1 PFAM: protein of unknown function DUF795; KEGG: gyc:GYMC61_1876 protein of unknown function DUF795 YP_003672006.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: gyc:GYMC61_1875 PDZ/DHR/GLGF domain protein YP_003672007.1 PFAM: patatin; KEGG: gyc:GYMC61_1874 lysophospholipase YP_003672008.1 KEGG: gyc:GYMC61_1873 sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein YP_003672009.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: gyc:GYMC61_1872 pantetheine-phosphate adenylyltransferase; PFAM: cytidylyltransferase YP_003672010.1 KEGG: gyc:GYMC61_1871 methyltransferase; TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase YP_003672011.1 KEGG: gyc:GYMC61_1870 hypothetical protein YP_003672012.1 PFAM: Uncharacterised protein family UPF0298; KEGG: gyc:GYMC61_1869 uncharacterized protein family UPF0298 YP_003672013.1 PFAM: protein of unknown function DUF1333; KEGG: gyc:GYMC61_1868 protein of unknown function DUF1333 YP_003672014.1 KEGG: gyc:GYMC61_1867 hypothetical protein YP_003672015.1 manually curated; KEGG: gyc:GYMC61_1866 hypothetical protein YP_003672016.1 KEGG: gyc:GYMC61_1865 hypothetical protein YP_003672017.1 PFAM: SCP-like extracellular; KEGG: gyc:GYMC61_1864 SCP-like extracellular YP_003672018.1 KEGG: gyc:GYMC61_1863 signal transduction protein with CBS domains; PFAM: hypothetical protein; SMART: hypothetical protein YP_003672019.1 PFAM: protein of unknown function YugN-like; KEGG: gyc:GYMC61_1862 protein of unknown function YugN-like protein YP_003672020.1 KEGG: gyc:GYMC61_1861 hypothetical protein YP_003672021.1 PFAM: protein of unknown function DUF420; KEGG: gyc:GYMC61_1860 protein of unknown function DUF420 YP_003672022.1 KEGG: gyc:GYMC61_1859 cytochrome C oxidase assembly factor CtaG; TIGRFAM: cytochrome C oxidase assembly factor CtaG; PFAM: cytochrome C oxidase caa3-type, assembly factor CtaG-related YP_003672023.1 TIGRFAM: cytochrome C oxidase subunit IV; KEGG: gyc:GYMC61_1858 cytochrome C oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_003672024.1 KEGG: gyc:GYMC61_1857 cytochrome-c oxidase; PFAM: cytochrome C oxidase subunit III YP_003672025.1 KEGG: gyc:GYMC61_1856 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_003672026.1 KEGG: gyc:GYMC61_1855 cytochrome C oxidase subunit II; TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C class I; cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region YP_003672027.1 KEGG: gyc:GYMC61_1854 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_003672028.1 PFAM: cytochrome oxidase assembly; KEGG: gyc:GYMC61_1853 cytochrome oxidase assembly YP_003672029.1 KEGG: gyc:GYMC61_1852 pyruvate carboxylase; TIGRFAM: pyruvate carboxylase; PFAM: Conserved carboxylase region; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein YP_003672030.1 PFAM: cell cycle protein; KEGG: gyc:GYMC61_1851 cell cycle protein YP_003672031.1 PFAM: protein of unknown function DUF1507; KEGG: gyc:GYMC61_1850 protein of unknown function DUF1507 YP_003672032.1 KEGG: gyc:GYMC61_1849 hypothetical protein YP_003672033.1 KEGG: gyc:GYMC61_1848 PhoH family protein; PFAM: PhoH family protein; SMART: nucleotide binding protein PINc YP_003672034.1 KEGG: gyc:GYMC61_1847 sporulation lipoprotein, YhcN/YlaJ family; TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; PFAM: sporulation lipoprotein YhcN/YlaJ-like YP_003672035.1 PFAM: protein of unknown function DUF2197; KEGG: gyc:GYMC61_1846 protein of unknown function DUF2197 YP_003672036.1 KEGG: gyc:GYMC61_1845 hypothetical protein YP_003672037.1 KEGG: gyc:GYMC61_1844 hypothetical protein YP_003672038.1 KEGG: gyc:GYMC61_1843 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_003672039.1 KEGG: gka:GK1592 hypothetical protein YP_003672040.1 PFAM: inositol monophosphatase; KEGG: gyc:GYMC61_1841 inositol monophosphatase YP_003672041.1 KEGG: gyc:GYMC61_1840 hypothetical protein YP_003672042.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: gka:GK1066 hypothetical protein YP_003672043.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: gyc:GYMC61_1838 Orn/Lys/Arg decarboxylase major region YP_003672044.1 manually curated; KEGG: gka:GK1064 hypothetical protein YP_003672045.1 PFAM: Domain of unknown function DUF1885; KEGG: gyc:GYMC61_1837 domain of unknown function DUF1885 YP_003672046.1 KEGG: gyc:GYMC61_1836 hypothetical protein YP_003672047.1 KEGG: gyc:GYMC61_1835 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003672048.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gyc:GYMC61_1834 catalytic domain of components of various dehydrogenase complexes YP_003672049.1 PFAM: transketolase; transketolase domain protein; KEGG: gyc:GYMC61_1833 transketolase YP_003672050.1 TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; KEGG: gyc:GYMC61_1832 pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component YP_003672051.1 KEGG: gyc:GYMC61_1831 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003672052.1 KEGG: gyc:GYMC61_1830 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003672053.1 PFAM: protein of unknown function DUF1447; KEGG: gyc:GYMC61_1828 protein of unknown function DUF1447 YP_003672054.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: gyc:GYMC61_1827 beta-lactamase YP_003672055.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: gyc:GYMC61_1826 TrkA-N domain protein YP_003672056.1 PFAM: protein of unknown function UPF0180; KEGG: gka:GK1051 hypothetical protein YP_003672057.1 TIGRFAM: amidohydrolase; KEGG: gyc:GYMC61_1824 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003672058.1 KEGG: gyc:GYMC61_1823 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; PFAM: Tetrahydrodipicolinate succinyltransferase domain protein; transferase hexapeptide repeat containing protein YP_003672059.1 PFAM: hypothetical protein; KEGG: gyc:GYMC61_1822 hypothetical protein YP_003672060.1 KEGG: gyc:GYMC61_1821 hypothetical protein YP_003672061.1 KEGG: gyc:GYMC61_1820 hypothetical protein YP_003672062.1 KEGG: gyc:GYMC61_1819 diguanylate phosphodiesterase; PFAM: EAL-like; EAL domain protein; SMART: EAL domain protein YP_003672063.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_1818 short-chain dehydrogenase/reductase SDR YP_003672064.1 PFAM: metallophosphoesterase; KEGG: gyc:GYMC61_1817 metallophosphoesterase YP_003672065.1 KEGG: gyc:GYMC61_1816 hypothetical protein YP_003672066.1 PFAM: glycosyl transferase family 2; chitin synthase; KEGG: gyc:GYMC61_1815 glycosyl transferase family 2 YP_003672067.1 KEGG: gyc:GYMC61_1814 hypothetical protein YP_003672068.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: gka:GK1039 hypothetical protein; SMART: GGDEF domain containing protein; response regulator receiver YP_003672069.1 PFAM: Domain of unknown function DUF1906; KEGG: gyc:GYMC61_1812 domain of unknown function DUF1906 YP_003672070.1 KEGG: gyc:GYMC61_1811 magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg2 transporter protein CorA family protein YP_003672071.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_1810 hypothetical protein YP_003672072.1 PFAM: aminotransferase class I and II; KEGG: gyc:GYMC61_1809 aminotransferase class I and II YP_003672073.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gyc:GYMC61_1807 alcohol dehydrogenase zinc-binding domain protein YP_003672074.1 PFAM: 2-phosphosulfolactate phosphatase; KEGG: gyc:GYMC61_1806 2-phosphosulfolactate phosphatase YP_003672075.1 PFAM: aminoglycoside phosphotransferase; KEGG: gyc:GYMC61_1805 aminoglycoside phosphotransferase YP_003672076.1 PFAM: regulatory protein TetR; KEGG: gyc:GYMC61_1804 TetR family transcriptional regulator YP_003672077.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_1803 AMP-dependent synthetase and ligase YP_003672078.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gka:GK1029 gluconate 5-dehydrogenase YP_003672079.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_1801 acyl-CoA dehydrogenase domain protein YP_003672080.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gka:GK1027 3-hydroxyisobutyrate dehydrogenase YP_003672081.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_1799 short-chain dehydrogenase/reductase SDR YP_003672082.1 KEGG: gyc:GYMC61_1798 hypothetical protein YP_003672083.1 KEGG: gyc:GYMC61_1797 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003672084.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: gyc:GYMC61_1796 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; transketolase YP_003672086.1 KEGG: gyc:GYMC61_1795 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003672087.1 KEGG: gyc:GYMC61_1794 hypothetical protein YP_003672088.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_1793 GCN5-related N-acetyltransferase YP_003672089.1 PFAM: peptidoglycan-binding protein; KEGG: gyc:GYMC61_1791 peptidoglycan-binding protein YP_003672090.1 KEGG: gyc:GYMC61_1790 hypothetical protein YP_003672091.1 KEGG: gka:GK0997 hypothetical protein; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256 YP_003672092.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; KEGG: gyc:GYMC61_1787 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003672093.1 KEGG: gyc:GYMC61_1786 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003672094.1 KEGG: gyc:GYMC61_1785 PTS system, glucose-specific IIBC subunit; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIsubunit alpha; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; sugar-specific permease EIIA 1 domain YP_003672095.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: gyc:GYMC61_1784 transcriptional antiterminator, BglG YP_003672096.1 KEGG: gyc:GYMC61_1783 hypothetical protein YP_003672097.1 PFAM: sodium/hydrogen exchanger; KEGG: gyc:GYMC61_1782 sodium/hydrogen exchanger YP_003672098.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; histidine kinase A domain protein; KEGG: gyc:GYMC61_1781 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003672099.1 KEGG: gyc:GYMC61_1780 hypothetical protein YP_003672100.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_1779 short-chain dehydrogenase/reductase SDR YP_003672101.1 KEGG: gka:GK0983 hypothetical protein YP_003672102.1 KEGG: gyc:GYMC61_1777 hypothetical protein YP_003672103.1 KEGG: gyc:GYMC61_1776 cell wall hydrolase SleB; PFAM: cell wall hydrolase SleB; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003672104.1 PFAM: protein of unknown function DUF2187; KEGG: gtn:GTNG_0868 hypothetical protein YP_003672105.1 KEGG: gyc:GYMC61_1774 semialdehyde dehydrogenase YP_003672106.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: gka:GK0978 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_003672107.1 KEGG: gyc:GYMC61_1772 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; TIGRFAM: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; PFAM: radical SAM protein YP_003672108.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: gyc:GYMC61_1771 6-pyruvoyl tetrahydropterin synthase and hypothetical protein YP_003672109.1 KEGG: gyc:GYMC61_1770 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_003672110.1 KEGG: gyc:GYMC61_1769 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003672111.1 KEGG: gyc:GYMC61_1768 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein YP_003672112.1 PFAM: GerA spore germination protein; KEGG: gyc:GYMC61_1767 GerA spore germination protein YP_003672113.1 KEGG: gyc:GYMC61_1766 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003672114.1 KEGG: gyc:GYMC61_1765 hypothetical protein YP_003672115.1 KEGG: gyc:GYMC61_1764 hypothetical protein YP_003672116.1 KEGG: gyc:GYMC61_1763 ATPase AAA; PFAM: ATPase AAA; ATPase AAA; UvrB/UvrC protein; Clp ATPase-like; SMART: ATPase AAA YP_003672117.1 KEGG: gka:GK0967 hypothetical protein YP_003672118.1 KEGG: gyc:GYMC61_1761 hypothetical protein YP_003672119.1 PFAM: DNA polymerase subunit beta; KEGG: gyc:GYMC61_1760 DNA polymerase subunit beta YP_003672120.1 PFAM: regulatory protein TetR; KEGG: gyc:GYMC61_1759 TetR family transcriptional regulator YP_003672121.1 PFAM: ABC transporter; KEGG: gyc:GYMC61_1758 ABC-2 type transporter YP_003672122.1 KEGG: gyc:GYMC61_1757 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672123.1 PFAM: FR47 domain protein; KEGG: gyc:GYMC61_1756 FR47 domain protein YP_003672124.1 KEGG: gyc:GYMC61_1755 oligoendopeptidase, M3 family; TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_003672125.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; hypothetical protein; KEGG: gyc:GYMC61_1753 peptidase S9 prolyl oligopeptidase active site domain protein YP_003672126.1 manually curated; KEGG: gyc:GYMC61_1752 short chain dehydrogenase YP_003672127.1 PFAM: propanediol utilization protein; KEGG: gyc:GYMC61_1751 propanediol utilization protein YP_003672128.1 KEGG: gyc:GYMC61_1750 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003672129.1 PFAM: zinc/iron permease; KEGG: gyc:GYMC61_1749 zinc/iron permease YP_003672130.1 KEGG: gyc:GYMC61_1748 acireductone dioxygenase ARD; PFAM: acireductone dioxygenase YP_003672131.1 TIGRFAM: methylthioribulose-1-phosphate dehydratase; KEGG: gyc:GYMC61_1747 methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein YP_003672132.1 KEGG: gyc:GYMC61_1746 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; TIGRFAM: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_003672133.1 TIGRFAM: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; KEGG: gyc:GYMC61_1745 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; PFAM: ribulose bisphosphate carboxylase large chain YP_003672134.1 PFAM: aminotransferase class I and II; KEGG: gyc:GYMC61_1744 aminotransferase class I and II YP_003672135.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gyc:GYMC61_1743 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003672136.1 TIGRFAM: 5-methylthioribose kinase; KEGG: gyc:GYMC61_1742 5-methylthioribose kinase; PFAM: aminoglycoside phosphotransferase YP_003672137.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: gyc:GYMC61_1741 translation initiation factor, aIF-2BI family; PFAM: initiation factor 2B related YP_003672138.1 KEGG: gka:GK0948 ribose ABC transporter substrate-binding protein YP_003672139.1 KEGG: gyc:GYMC61_1739 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672140.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_1738 inner-membrane translocator YP_003672141.1 KEGG: gyc:GYMC61_1737 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_003672142.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; hypothetical protein; KEGG: gyc:GYMC61_1736 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003672143.1 KEGG: gyc:GYMC61_1735 cobalamin B12-binding domain protein; PFAM: cobalamin B12-binding domain protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003672144.1 KEGG: gyc:GYMC61_1734 hypothetical protein YP_003672145.1 KEGG: gyc:GYMC61_1733 hypothetical protein YP_003672146.1 KEGG: gyc:GYMC61_1732 hypothetical protein YP_003672147.1 KEGG: gyc:GYMC61_1731 hypothetical protein YP_003672148.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_1730 major facilitator superfamily MFS_1 YP_003672149.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_1729 binding-protein-dependent transport systems inner membrane component YP_003672150.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_1728 binding-protein-dependent transport systems inner membrane component YP_003672151.1 PFAM: extracellular solute-binding protein family 1; KEGG: gyc:GYMC61_1727 extracellular solute-binding protein family 1 YP_003672152.1 PFAM: amylo-alpha-16-glucosidase; KEGG: gyc:GYMC61_1726 amylo-alpha-16-glucosidase YP_003672153.1 KEGG: gyc:GYMC61_1725 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003672154.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gyc:GYMC61_1724 small acid-soluble spore protein alpha/beta type YP_003672155.1 PFAM: amino acid permease-associated region; KEGG: gyc:GYMC61_1720 amino acid permease-associated region YP_003672156.1 PFAM: protein of unknown function DUF485; KEGG: gyc:GYMC61_1719 protein of unknown function DUF485 YP_003672157.1 KEGG: gyc:GYMC61_1718 SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003672158.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK0927 acetyltransferase YP_003672159.1 KEGG: gka:GK0926 N-acylamino acid racemase; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; PFAM: mandelate racemase/muconate lactonizing protein YP_003672160.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_1715 GCN5-related N-acetyltransferase YP_003672161.1 KEGG: gyc:GYMC61_1714 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003672162.1 KEGG: gyc:GYMC61_1713 hypothetical protein YP_003672163.1 PFAM: protein of unknown function DUF1212; KEGG: gyc:GYMC61_1712 protein of unknown function DUF1212 YP_003672164.1 KEGG: gyc:GYMC61_1711 diacylglycerol kinase catalytic region; PFAM: diacylglycerol kinase; SMART: diacylglycerol kinase catalytic region YP_003672165.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: gyc:GYMC61_1710 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase YP_003672166.1 KEGG: gyc:GYMC61_1705 Linocin_M18 bacteriocin protein; manually curated; PFAM: Linocin_M18 bacteriocin protein YP_003672167.1 KEGG: gyc:GYMC61_1704 hypothetical protein YP_003672168.1 KEGG: gyc:GYMC61_1702 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003672169.1 PFAM: AIG2 family protein; KEGG: gtn:GTNG_0802 hypothetical protein YP_003672170.1 KEGG: gtn:GTNG_0800 hypothetical protein YP_003672171.1 PFAM: transcriptional regulator; KEGG: gtn:GTNG_0799 hypothetical protein YP_003672172.1 PFAM: ribonucleotide reductase; KEGG: gyc:GYMC61_1700 ribonucleoside-diphosphate reductase YP_003672173.1 KEGG: gka:GK0911 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase large subunit domain protein YP_003672174.1 TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter; KEGG: gka:GK0910 ABC transporter ATP-binding protein; SMART: ATPase AAA YP_003672175.1 PFAM: ABC transporter; KEGG: gka:GK0909 ABC transporter permease YP_003672176.1 KEGG: gka:GK0908 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003672177.1 KEGG: gka:GK0907 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003672179.1 KEGG: gyc:GYMC61_1694 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003672180.1 KEGG: gyc:GYMC61_1693 hypothetical protein YP_003672181.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: gka:GK0904 multicopper oxidase YP_003672182.1 PFAM: DNA polymerase subunit beta; KEGG: gyc:GYMC61_1691 DNA polymerase subunit beta YP_003672183.1 KEGG: gyc:GYMC61_1690 copper ion binding protein; TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein YP_003672184.1 KEGG: gyc:GYMC61_1689 copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; copper ion binding protein; ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003672185.1 PFAM: protein of unknown function DUF156; KEGG: gyc:GYMC61_1688 protein of unknown function DUF156 YP_003672187.1 KEGG: gyc:GYMC61_1685 hypothetical protein YP_003672188.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: gyc:GYMC61_1680 multicopper oxidase type 3 YP_003672189.1 KEGG: gym:GYMC10_2921 hypothetical protein YP_003672190.1 KEGG: gym:GYMC10_2921 hypothetical protein YP_003672191.1 PFAM: glycoside hydrolase family 1; KEGG: eat:EAT1b_1879 glycoside hydrolase family 1 YP_003672192.1 KEGG: afl:Aflv_0774 hypothetical protein YP_003672193.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gyc:GYMC61_1679 LysR family transcriptional regulator YP_003672194.1 PFAM: Uncharacterised protein family UPF0324; KEGG: gyc:GYMC61_1678 uncharacterized protein family UPF0324 YP_003672195.1 KEGG: gka:GK0889 hypothetical protein YP_003672196.1 PFAM: transglycosylase; KEGG: gwc:GWCH70_1716 transglycosylase YP_003672197.1 KEGG: gyc:GYMC61_1675 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003672198.1 KEGG: swo:Swol_2196 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_003672199.1 PFAM: restriction modification system DNA specificity domain; KEGG: gyc:GYMC61_1674 restriction modification system DNA specificity domain protein YP_003672200.1 KEGG: gyc:GYMC61_1673 N-6 DNA methylase; PFAM: N-6 DNA methylase YP_003672201.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; helicase; KEGG: gyc:GYMC61_1672 type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_003672202.1 KEGG: gyc:GYMC61_1671 hypothetical protein YP_003672203.1 KEGG: gyc:GYMC61_1669 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region YP_003672204.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gyc:GYMC61_1668 cystathionine gamma-synthase YP_003672205.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gyc:GYMC61_1667 cystathionine gamma-synthase YP_003672206.1 PFAM: esterase; KEGG: gyc:GYMC61_1666 esterase YP_003672207.1 PFAM: phosphoesterase HXTX; KEGG: gyc:GYMC61_1665 phosphoesterase HXTX YP_003672208.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gyc:GYMC61_1664 GCN5-related N-acetyltransferase YP_003672209.1 KEGG: gka:GK0862 hypothetical protein YP_003672210.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_1662 hypothetical protein YP_003672211.1 KEGG: gyc:GYMC61_1661 hypothetical protein YP_003672212.1 PFAM: thioredoxin domain; KEGG: gyc:GYMC61_1660 thioredoxin domain protein YP_003672213.1 KEGG: gyc:GYMC61_1659 hypothetical protein YP_003672214.1 PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: gyc:GYMC61_1658 protein of unknown function DUF421 YP_003672215.1 PFAM: protein of unknown function DUF1657; KEGG: gyc:GYMC61_1657 protein of unknown function DUF1657 YP_003672216.1 KEGG: gyc:GYMC61_1656 stage V sporulation protein AE; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein YP_003672217.1 KEGG: gyc:GYMC61_1655 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: stage V sporulation AD family protein YP_003672218.1 KEGG: gyc:GYMC61_1654 stage V sporulation protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein YP_003672219.1 manually curated; KEGG: gyc:GYMC61_1653 hypothetical protein YP_003672220.1 PFAM: protein of unknown function DUF1657; KEGG: gyc:GYMC61_1652 protein of unknown function DUF1657 YP_003672221.1 KEGG: gyc:GYMC61_1651 hypothetical protein YP_003672222.1 KEGG: gyc:GYMC61_1650 hypothetical protein YP_003672223.1 KEGG: gyc:GYMC61_1649 spore coat protein regulator protein YlbO YP_003672224.1 KEGG: gka:GK0847 hypothetical protein YP_003672225.1 KEGG: gyc:GYMC61_1647 hypothetical protein YP_003672226.1 PFAM: protein of unknown function DUF1360; KEGG: gyc:GYMC61_1646 protein of unknown function DUF1360 YP_003672227.1 KEGG: gyc:GYMC61_1645 hypothetical protein YP_003672228.1 KEGG: gyc:GYMC61_1644 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SMART: CHK kinase-like YP_003672229.1 PFAM: glycosyl transferase group 1; KEGG: gyc:GYMC61_1643 glycosyl transferase group 1 YP_003672230.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: gyc:GYMC61_1642 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003672231.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gyc:GYMC61_1641 NAD-dependent epimerase/dehydratase YP_003672232.1 PFAM: glycosyl transferase group 1; KEGG: gyc:GYMC61_1640 glycosyl transferase group 1 YP_003672233.1 KEGG: gyc:GYMC61_1639 spore coat protein, CotS family; TIGRFAM: spore coat protein, CotS family; PFAM: aminoglycoside phosphotransferase YP_003672234.1 PFAM: glycosyl transferase group 1; KEGG: gka:GK0836 lipopolysaccharide N-acetylglucosaminyltransferase YP_003672235.1 KEGG: gyc:GYMC61_1637 hypothetical protein YP_003672236.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_1636 short-chain dehydrogenase/reductase SDR YP_003672237.1 PFAM: cell cycle protein; KEGG: gyc:GYMC61_1634 cell cycle protein YP_003672238.1 KEGG: gyc:GYMC61_1633 bis(5'nucleosyl)-tetraphosphatase, ApaH; PFAM: metallophosphoesterase YP_003672239.1 KEGG: gyc:GYMC61_1632 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase YP_003672240.1 PFAM: ATP-NAD/AcoX kinase; KEGG: gyc:GYMC61_1631 ATP-NAD/AcoX kinase YP_003672241.1 PFAM: RelA/SpoT domain protein; KEGG: gyc:GYMC61_1630 RelA/SpoT domain protein YP_003672242.1 KEGG: gka:GK0828 hypothetical protein YP_003672243.1 PFAM: adenylate cyclase; KEGG: gyc:GYMC61_1628 adenylate cyclase YP_003672244.1 PFAM: lytic transglycosylase catalytic; KEGG: gyc:GYMC61_1627 lytic transglycosylase catalytic YP_003672245.1 PFAM: globin; KEGG: gyc:GYMC61_1626 globin YP_003672246.1 KEGG: gyc:GYMC61_1625 hypothetical protein YP_003672247.1 KEGG: gka:GK0823 hypothetical protein YP_003672248.1 KEGG: gyc:GYMC61_1623 oligoendopeptidase F; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F YP_003672249.1 PFAM: Competence CoiA family protein; KEGG: gyc:GYMC61_1622 competence CoiA family protein YP_003672250.1 KEGG: gka:GK0820 cardiolipin synthetase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_003672251.1 PFAM: negative regulator of genetic competence; KEGG: gyc:GYMC61_1620 negative regulator of genetic competence YP_003672252.1 PFAM: integral membrane protein TerC; KEGG: gyc:GYMC61_1619 integral membrane protein TerC YP_003672253.1 PFAM: arsenate reductase; KEGG: gyc:GYMC61_1618 arsenate reductase protein YP_003672254.1 KEGG: gyc:GYMC61_1617 hypothetical protein YP_003672255.1 KEGG: gyc:GYMC61_1616 ABC transporter protein; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003672256.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; KEGG: gyc:GYMC61_1615 oligopeptide/dipeptide ABC transporter ATPase; SMART: ATPase AAA YP_003672257.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_1614 binding-protein-dependent transport systems inner membrane component YP_003672258.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_1613 binding-protein-dependent transport systems inner membrane component YP_003672259.1 PFAM: extracellular solute-binding protein family 5; KEGG: gyc:GYMC61_1612 extracellular solute-binding protein family 5 YP_003672260.1 KEGG: gka:GK0810 hypothetical protein YP_003672261.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: gyc:GYMC61_1610 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003672262.1 KEGG: gyc:GYMC61_1609 hypothetical protein YP_003672263.1 KEGG: gyc:GYMC61_1608 hypothetical protein YP_003672264.1 KEGG: gyc:GYMC61_1606 3-oxoacyl-(acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase YP_003672265.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: gyc:GYMC61_1605 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_003672266.1 KEGG: gyc:GYMC61_1604 hypothetical protein YP_003672267.1 KEGG: gka:GK0802 hypothetical protein YP_003672268.1 KEGG: gyc:GYMC61_1602 hypothetical protein YP_003672269.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: gyc:GYMC61_1601 ATP-dependent chaperone ClpB; SMART: AAA ATPase YP_003672270.1 KEGG: gyc:GYMC61_1600 hypothetical protein YP_003672271.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: gyc:GYMC61_1599 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_003672272.1 KEGG: gyc:GYMC61_1598 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; carbamoyl-phosphate synthetase large chain oligomerisation YP_003672273.1 KEGG: gyc:GYMC61_1597 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl-phosphate synthase small chain YP_003672274.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: gyc:GYMC61_1596 acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_003672275.1 KEGG: gka:GK0792 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003672276.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: gyc:GYMC61_1594 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_003672277.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: gyc:GYMC61_1593 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: semialdehyde dehydrogenase NAD - binding; semialdehyde dehydrogenase dimerisation region YP_003672278.1 KEGG: gyc:GYMC61_1592 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003672279.1 KEGG: gyc:GYMC61_1591 hypothetical protein YP_003672280.1 KEGG: cbb:CLD_2907 hypothetical protein YP_003672281.1 KEGG: gyc:GYMC61_1588 hypothetical protein YP_003672282.1 KEGG: gyc:GYMC61_1587 molybdopterin converting factor, subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_003672283.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: gka:GK0774 molybdopterin converting factor (subunit 2) YP_003672284.1 KEGG: gyc:GYMC61_1585 molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region YP_003672285.1 KEGG: gyc:GYMC61_1584 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_003672286.1 KEGG: gka:GK0771 hypothetical protein; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; hemerythrin HHE cation binding domain protein YP_003672287.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis protein; radical SAM domain protein; KEGG: gka:GK0770 molybdopterin cofactor biosynthesis protein; SMART: Elongator protein 3/MiaB/NifB YP_003672288.1 KEGG: gka:GK0769 molybdenum binding-protein-dependent transporter (permease); TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003672289.1 KEGG: gka:GK0768 FNR/CRP family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_003672290.1 PFAM: multicopper oxidase type 3; KEGG: gka:GK0767 nitrite reductase YP_003672291.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK0766 nitrate/nitrite transporter YP_003672292.1 KEGG: gyc:GYMC61_1578 hypothetical protein YP_003672293.1 KEGG: gyc:GYMC61_1577 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672294.1 KEGG: gyc:GYMC61_1576 hypothetical protein YP_003672295.1 KEGG: gyc:GYMC61_1575 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003672296.1 KEGG: gyc:GYMC61_1574 transmembrane anti-sigma factor YP_003672297.1 KEGG: gyc:GYMC61_1573 radical SAM protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003672298.1 KEGG: gyc:GYMC61_1572 hypothetical protein YP_003672299.1 KEGG: gyc:GYMC61_1571 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672300.1 KEGG: bld:BLi04305 hypothetical protein YP_003672301.1 KEGG: gyc:GYMC61_1569 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672302.1 KEGG: gyc:GYMC61_1568 membrane protein, predicted permease YP_003672303.1 KEGG: gyc:GYMC61_1567 hypothetical protein YP_003672304.1 KEGG: gyc:GYMC61_1566 hypothetical protein YP_003672305.1 KEGG: gyc:GYMC61_1565 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver YP_003672306.1 KEGG: gyc:GYMC61_1563 molybdopterin-guanine dinucleotide biosynthesis protein YP_003672307.1 PFAM: protein of unknown function DUF2249; KEGG: gyc:GYMC61_1562 protein of unknown function DUF2249 YP_003672308.1 KEGG: gyc:GYMC61_1560 hypothetical protein YP_003672309.1 KEGG: gka:GK0760 hypothetical protein YP_003672310.1 KEGG: gyc:GYMC61_1556 nitric-oxide reductase YP_003672311.1 manually curated; PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: gka:GK0757 Crp/Fnr family transcriptional regulator; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003672312.1 KEGG: gtn:GTNG_0641 hypothetical protein YP_003672313.1 KEGG: gyc:GYMC61_1553 hypothetical protein YP_003672314.1 KEGG: gyc:GYMC61_1552 hypothetical protein YP_003672315.1 PFAM: protein of unknown function DUF59; KEGG: gyc:GYMC61_1551 protein of unknown function DUF59 YP_003672316.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gka:GK0752 huntingtin interacting protein E-like protein YP_003672317.1 KEGG: gyc:GYMC61_1549 hypothetical protein YP_003672318.1 KEGG: gyc:GYMC61_1548 heavy metal translocating P-type ATPase; TIGRFAM: ATPase P; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003672319.1 KEGG: gyc:GYMC61_1547 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003672320.1 KEGG: gyc:GYMC61_1546 hypothetical protein YP_003672321.1 KEGG: gyc:GYMC61_1545 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003672322.1 KEGG: gyc:GYMC61_1544 hypothetical protein YP_003672323.1 KEGG: gtn:GTNG_0633 hypothetical protein YP_003672324.1 KEGG: gyc:GYMC61_1542 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003672325.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gyc:GYMC61_1541 filamentation induced by cAMP protein Fic YP_003672326.1 KEGG: gyc:GYMC61_1540 hypothetical protein YP_003672328.1 PFAM: protein of unknown function DUF520; KEGG: gka:GK0742 nucleotide-binding protein YP_003672329.1 KEGG: gyc:GYMC61_1538 hypothetical protein YP_003672330.1 KEGG: gka:GK0737 multidrug ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672331.1 PFAM: protein of unknown function DUF1572; KEGG: gka:GK0734 hypothetical protein YP_003672332.1 KEGG: gka:GK0733 hypothetical protein YP_003672333.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: gka:GK0731 alcohol dehydrogenase YP_003672334.1 PFAM: aldehyde dehydrogenase; KEGG: gka:GK0730 aldehyde dehydrogenase YP_003672335.1 KEGG: gka:GK0729 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_003672336.1 KEGG: gka:GK0728 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein YP_003672337.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gka:GK0727 1,3 propanediol dehydrogenase YP_003672338.1 PFAM: extracellular solute-binding protein family 1; KEGG: gyc:GYMC61_1534 extracellular solute-binding protein family 1 YP_003672339.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_1533 binding-protein-dependent transport systems inner membrane component YP_003672340.1 KEGG: gyc:GYMC61_1532 binding-protein-dependent transport systems inner membrane component YP_003672341.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; KEGG: gyc:GYMC61_1531 spermidine/putrescine ABC transporter ATPase subunit; SMART: ATPase AAA YP_003672342.1 KEGG: gyc:GYMC61_1530 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672343.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: gyc:GYMC61_1529 protein of unknown function DUF95 transmembrane YP_003672344.1 KEGG: gyc:GYMC61_1528 hypothetical protein YP_003672345.1 KEGG: gka:GK0719 circularin A precursor; TIGRFAM: conserved hypothetical protein; PFAM: bacteriocin AS-48 YP_003672346.1 KEGG: gyc:GYMC61_1526 hypothetical protein YP_003672347.1 KEGG: gyc:GYMC61_1525 hypothetical protein YP_003672348.1 PFAM: homocysteine S-methyltransferase; methylenetetrahydrofolate reductase; KEGG: gyc:GYMC61_1524 homocysteine S-methyltransferase YP_003672349.1 KEGG: gyc:GYMC61_1523 methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_003672350.1 PFAM: PilT protein domain protein; KEGG: gyc:GYMC61_1522 PilT protein domain protein YP_003672351.1 KEGG: gyc:GYMC61_1521 transcriptional regulator, AbrB family; TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein YP_003672352.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_1520 short-chain dehydrogenase/reductase SDR YP_003672353.1 KEGG: gyc:GYMC61_1519 dihydrolipoyllysine-residue succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003672354.1 PFAM: transketolase; transketolase domain protein; KEGG: gyc:GYMC61_1518 transketolase YP_003672355.1 KEGG: gyc:GYMC61_1517 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component YP_003672356.1 KEGG: gka:GK0709 acetoin operon expression regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein YP_003672357.1 KEGG: yen:YE1252 hypothetical protein YP_003672358.1 PFAM: phosphogluconate dehydrogenase, NAD-binding, -like; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bpu:BPUM_3412 3-hydroxyisobutyrate dehydrogenase YP_003672359.1 PFAM: dimethylmenaquinone methyltransferase; KEGG: avn:Avin_31280 hypothetical protein YP_003672360.1 PFAM: LmbE family protein; KEGG: rxy:Rxyl_0201 hypothetical protein YP_003672361.1 KEGG: tro:trd_0903 hypothetical protein YP_003672362.1 KEGG: mse:Msed_1060 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003672363.1 TIGRFAM: catechol 2,3 dioxygenase; KEGG: aac:Aaci_1615 catechol 2,3-dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003672364.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: bsu:BSU07150 monooxygenase YP_003672365.1 KEGG: bca:BCE_5072 hypothetical protein YP_003672366.1 PFAM: O-methyltransferase family 3; KEGG: bca:BCE_5071 O-methyltransferase YP_003672367.1 KEGG: bcq:BCQ_0638 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003672368.1 KEGG: btk:BT9727_0482 response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003672369.1 PFAM: protein of unknown function DUF214; KEGG: lmh:LMHCC_2448 macrolide export ATP-binding/permease MacB YP_003672370.1 KEGG: ate:Athe_2297 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003672371.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: lmc:Lm4b_00190 hypothetical protein YP_003672372.1 KEGG: gka:GK0708 transcriptional regulator involved in carbon catabolite control; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003672373.1 KEGG: gka:GK0707 alpha-amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003672374.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_1513 binding-protein-dependent transport systems inner membrane component YP_003672375.1 PFAM: binding-protein-dependent transporters inner membrane component; hypothetical protein; KEGG: gyc:GYMC61_1512 binding-protein-dependent transporters inner membrane component YP_003672376.1 PFAM: extracellular solute-binding protein family 1; KEGG: gyc:GYMC61_1511 extracellular solute-binding protein family 1 YP_003672377.1 KEGG: gka:GK0703 alpha-cyclodextrinase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain YP_003672378.1 KEGG: gka:GK0702 AraC/XylS family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003672379.1 KEGG: gtn:GTNG_0608 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003672380.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: gyc:GYMC61_1505 asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003672381.1 KEGG: gyc:GYMC61_1504 hypothetical protein YP_003672382.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; domain of unknown function DUF1745; FIST C domain; PAS fold domain protein; KEGG: gyc:GYMC61_1503 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003672383.1 PFAM: protein of unknown function DUF1516; KEGG: gyc:GYMC61_1502 protein of unknown function DUF1516 YP_003672384.1 KEGG: gyc:GYMC61_1501 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate hydrolase YP_003672385.1 PFAM: sporulation stage 0, Spo0E-like regulatory phosphatase; KEGG: gka:GK0695 hypothetical protein YP_003672386.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: gyc:GYMC61_1499 protein of unknown function DUF405 YP_003672387.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_1498 AMP-dependent synthetase and ligase YP_003672388.1 PFAM: Spore germination protein gerPA/gerPF; KEGG: gyc:GYMC61_1497 spore germination protein gerPA/gerPF YP_003672389.1 PFAM: Spore germination protein gerPA/gerPF; KEGG: gka:GK0691 spore germination protein YP_003672390.1 PFAM: Spore germination protein gerPA/gerPF; KEGG: gyc:GYMC61_1495 spore germination protein gerPA/gerPF YP_003672391.1 KEGG: gyc:GYMC61_1494 spore germination protein YP_003672392.1 PFAM: Spore germination protein GerPC; KEGG: gyc:GYMC61_1493 spore germination protein GerPC YP_003672393.1 KEGG: gyc:GYMC61_1492 spore germination protein YP_003672394.1 KEGG: gyc:GYMC61_1491 spore germination protein YP_003672395.1 PFAM: Spore germination protein gerPA/gerPF; KEGG: gyc:GYMC61_1490 spore germination protein gerPA/gerPF YP_003672396.1 PFAM: SMC domain protein; KEGG: gyc:GYMC61_1488 SMC domain protein YP_003672397.1 KEGG: gyc:GYMC61_1487 nuclease SbcCD, D subunit; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase YP_003672398.1 KEGG: gka:GK0682 ATP-dependent deoxyribonuclease subunit A; TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase YP_003672399.1 KEGG: gyc:GYMC61_1485 ATP-dependent nuclease subunit B; TIGRFAM: ATP-dependent nuclease subunit B; PFAM: UvrD/REP helicase YP_003672400.1 TIGRFAM: signal peptidase I; KEGG: gka:GK0680 signal peptidase I (SPase I); PFAM: peptidase S24/S26A/S26B, conserved region YP_003672401.1 PFAM: SNARE associated Golgi protein; KEGG: gyc:GYMC61_1483 SNARE associated Golgi protein-related protein YP_003672402.1 PFAM: ComK family protein; KEGG: gyc:GYMC61_1482 ComK family protein YP_003672403.1 KEGG: gka:GK0677 hypothetical protein YP_003672404.1 KEGG: gyc:GYMC61_1480 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_003672405.1 PFAM: electron transporter SCO1/SenC; KEGG: gyc:GYMC61_1479 electron transporter SCO1/SenC YP_003672406.1 PFAM: branched-chain amino acid transport; KEGG: gyc:GYMC61_1478 branched-chain amino acid transport YP_003672407.1 PFAM: AzlC family protein; KEGG: gyc:GYMC61_1477 AzlC family protein YP_003672408.1 KEGG: gyc:GYMC61_1476 D-amino acid aminotransferase; TIGRFAM: D-amino acid aminotransferase; PFAM: aminotransferase class IV YP_003672409.1 KEGG: gyc:GYMC61_1475 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672410.1 PFAM: inner-membrane translocator; KEGG: gka:GK0670 ABC transporter permease YP_003672411.1 PFAM: protein of unknown function DUF534; KEGG: gyc:GYMC61_1473 protein of unknown function DUF534 YP_003672412.1 KEGG: gka:GK0668 acyl-CoA synthetase; TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003672413.1 KEGG: gyc:GYMC61_1471 beta-lactamase YP_003672414.1 KEGG: gyc:GYMC61_1470 hypothetical protein YP_003672415.1 PFAM: regulatory protein TetR; KEGG: gyc:GYMC61_1468 TetR family transcriptional regulator YP_003672416.1 TIGRFAM: protoporphyrinogen oxidase; KEGG: gka:GK0663 protoporphyrinogen oxidase; PFAM: amine oxidase YP_003672417.1 KEGG: gka:GK0662 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase YP_003672418.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: gyc:GYMC61_1465 uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D) YP_003672419.1 KEGG: gka:GK0660 hypothetical protein YP_003672420.1 PFAM: ABC transporter; KEGG: gyc:GYMC61_1463 ABC transporter YP_003672421.1 KEGG: gyc:GYMC61_1462 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672422.1 PFAM: histidine triad (HIT) protein; KEGG: gyc:GYMC61_1461 histidine triad (HIT) protein YP_003672423.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gyc:GYMC61_1460 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003672424.1 KEGG: gyc:GYMC61_1459 hypothetical protein YP_003672425.1 PFAM: protein of unknown function DUF1878; KEGG: gyc:GYMC61_1458 protein of unknown function DUF1878 YP_003672426.1 KEGG: gyc:GYMC61_1457 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003672427.1 KEGG: gyc:GYMC61_1456 hypothetical protein YP_003672428.1 KEGG: gyc:GYMC61_1455 hypothetical protein YP_003672429.1 TIGRFAM: phosphoserine aminotransferase; KEGG: gyc:GYMC61_1454 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_003672430.1 KEGG: gyc:GYMC61_1453 hypothetical protein YP_003672431.1 KEGG: gyc:GYMC61_1452 metal dependent phosphohydrolase YP_003672432.1 KEGG: gka:GK0646 3'-5' exoribonuclease YhaM; PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region YP_003672433.1 KEGG: gyc:GYMC61_1451 sodium ABC transporter permease YP_003672434.1 KEGG: gka:GK0644 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672435.1 KEGG: gyc:GYMC61_1449 hypothetical protein YP_003672436.1 KEGG: gyc:GYMC61_1447 hypothetical protein YP_003672437.1 PFAM: radical SAM protein; KEGG: gyc:GYMC61_1445 coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB YP_003672438.1 KEGG: gka:GK0641 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003672439.1 PFAM: protein of unknown function DUF964; KEGG: gyc:GYMC61_1433 protein of unknown function DUF964 YP_003672440.1 PFAM: protein of unknown function DUF445; KEGG: gyc:GYMC61_1432 protein of unknown function DUF445 YP_003672441.1 KEGG: gyc:GYMC61_1431 hypothetical protein YP_003672442.1 KEGG: gyc:GYMC61_1430 hypothetical protein YP_003672443.1 KEGG: gyc:GYMC61_1429 hypothetical protein YP_003672444.1 KEGG: gyc:GYMC61_1428 hypothetical protein YP_003672445.1 KEGG: gka:GK0634 hypothetical protein YP_003672446.1 KEGG: gyc:GYMC61_1426 hypothetical protein YP_003672447.1 manually curated; KEGG: gyc:GYMC61_1425 PucR family transcriptional regulator YP_003672448.1 KEGG: gyc:GYMC61_1424 ABC transporter protein; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA YP_003672449.1 KEGG: gyc:GYMC61_1423 hypothetical protein YP_003672450.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gyc:GYMC61_1422 small acid-soluble spore protein alpha/beta type YP_003672451.1 KEGG: gyc:GYMC61_1419 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; SMART: hypothetical protein YP_003672452.1 KEGG: gka:GK0627 hypothetical protein YP_003672453.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: gyc:GYMC61_1418 UBA/ThiF-type NAD/FAD binding protein YP_003672454.1 PFAM: thiazole biosynthesis protein; KEGG: gyc:GYMC61_1417 thiazole biosynthesis protein YP_003672455.1 KEGG: gyc:GYMC61_1416 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_003672456.1 KEGG: gyc:GYMC61_1415 glycine oxidase ThiO; TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase YP_003672457.1 PFAM: thiamine monophosphate synthase; KEGG: gka:GK0622 transcriptional regulator TenI YP_003672458.1 PFAM: cobalt transporter; KEGG: gka:GK0621 hypothetical protein YP_003672459.1 KEGG: gyc:GYMC61_1412 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672460.1 PFAM: ABC-type thiamin-related transporter, permease component 1, predicted; KEGG: gyc:GYMC61_1411 ABC-type thiamin-related transporter, permease 1, predicted YP_003672461.1 KEGG: gka:GK0618 transcriptional regulator; PFAM: TENA/THI-4 domain protein YP_003672462.1 KEGG: gyc:GYMC61_1409 protein of unknown function Met10; PFAM: protein of unknown function methylase SMART: PUA domain containing protein YP_003672463.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_1408 major facilitator superfamily MFS_1 YP_003672464.1 KEGG: gyc:GYMC61_1407 metal-dependent hydrolase YP_003672465.1 KEGG: gyc:GYMC61_1406 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003672466.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: gyc:GYMC61_1405 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003672467.1 PFAM: protein of unknown function DUF466; KEGG: gyc:GYMC61_1404 protein of unknown function DUF466 YP_003672468.1 PFAM: carbon starvation protein CstA; KEGG: gka:GK0612 carbon starvation protein YP_003672469.1 KEGG: gyc:GYMC61_1402 hypothetical protein YP_003672470.1 PFAM: integral membrane protein TerC; KEGG: gyc:GYMC61_1401 integral membrane protein TerC YP_003672471.1 PFAM: protein of unknown function DUF1232; KEGG: gka:GK0609 hypothetical protein YP_003672472.1 PFAM: small multidrug resistance protein; KEGG: gyc:GYMC61_1398 small multidrug resistance protein YP_003672473.1 KEGG: gyc:GYMC61_1397 hypothetical protein YP_003672474.1 KEGG: gyc:GYMC61_1396 cytochrome bd-type ubiquinol oxidase subunit I YP_003672475.1 PFAM: SpoVR family protein; KEGG: gyc:GYMC61_1395 SpoVR family protein YP_003672476.1 KEGG: bwe:BcerKBAB4_2489 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003672477.1 KEGG: btl:BALH_1973 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003672478.1 PFAM: SNARE associated Golgi protein; KEGG: gka:GK0573 alkaline phosphatase YP_003672479.1 KEGG: gyc:GYMC61_1390 hypothetical protein YP_003672480.1 KEGG: gyc:GYMC61_1389 hypothetical protein YP_003672481.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: gka:GK0570 phosphomannomutase YP_003672482.1 KEGG: gyc:GYMC61_1387 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_003672483.1 PFAM: disulfide bond formation protein DsbB; KEGG: gyc:GYMC61_1386 disulphide bond formation protein DsbB YP_003672484.1 PFAM: thioredoxin domain; KEGG: gyc:GYMC61_1385 thioredoxin domain protein YP_003672485.1 KEGG: gyc:GYMC61_1384 hypothetical protein YP_003672486.1 KEGG: gyc:GYMC61_1383 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase YP_003672487.1 PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; KEGG: gka:GK0564 hemolysin YP_003672488.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: gyc:GYMC61_1381 peptidase membrane zinc metallopeptidase YP_003672489.1 KEGG: gyc:GYMC61_1380 2,5-didehydrogluconate reductase; PFAM: aldo/keto reductase YP_003672490.1 PFAM: sodium:dicarboxylate symporter; KEGG: gka:GK0561 C4-dicarboxylate transporter DctA YP_003672491.1 KEGG: gyc:GYMC61_1378 TRAP dicarboxylate transporter DctP subunit; TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: extracellular solute-binding protein, family 7 YP_003672492.1 KEGG: gyc:GYMC61_1377 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_003672493.1 KEGG: gka:GK0558 two-component response regulator; PFAM: response regulator receiver; regulatory protein DeoR; SMART: response regulator receiver YP_003672494.1 KEGG: gyc:GYMC61_1374 hypothetical protein YP_003672495.1 KEGG: gyc:GYMC61_1373 sporulation protein YhbH; TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444 YP_003672496.1 KEGG: gyc:GYMC61_1372 serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_003672497.1 KEGG: gyc:GYMC61_1371 hypothetical protein YP_003672498.1 KEGG: gyc:GYMC61_1370 RNA methyltransferase, TrmH family, group 2; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_003672499.1 KEGG: gyc:GYMC61_1369 hypothetical protein YP_003672500.1 KEGG: gka:GK0482 hypothetical protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: hypothetical protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PBS lyase HEAT domain protein repeat-containing protein YP_003672501.1 PFAM: B3/4 domain protein; KEGG: gyc:GYMC61_1367 B3/4 domain protein YP_003672502.1 KEGG: gyc:GYMC61_1366 hypothetical protein YP_003672503.1 KEGG: gka:GK0479 hypothetical protein YP_003672504.1 PFAM: ferric-uptake regulator; KEGG: gyc:GYMC61_1364 Fur family ferric uptake regulator YP_003672505.1 KEGG: gyc:GYMC61_1363 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_003672506.1 PFAM: ion transport 2 domain protein; KEGG: gyc:GYMC61_1362 ion transport 2 domain protein YP_003672507.1 KEGG: gka:GK0475 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: lactate/malate dehydrogenase YP_003672508.1 PFAM: protein of unknown function DUF990; KEGG: gyc:GYMC61_1360 protein of unknown function DUF990 YP_003672509.1 PFAM: protein of unknown function DUF990; KEGG: gyc:GYMC61_1359 protein of unknown function DUF990 YP_003672510.1 KEGG: gyc:GYMC61_1358 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672511.1 KEGG: gyc:GYMC61_1356 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_003672512.1 PFAM: protein of unknown function DUF939; KEGG: gyc:GYMC61_1355 protein of unknown function DUF939 YP_003672513.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK0469 dipeptide ABC transporter permease YP_003672514.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_1353 binding-protein-dependent transport systems inner membrane component YP_003672515.1 PFAM: extracellular solute-binding protein family 5; KEGG: gyc:GYMC61_1352 extracellular solute-binding protein family 5 YP_003672516.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; KEGG: gtn:GTNG_0476 oligopeptide ABC transporter ATP-binding protein; SMART: ATPase AAA YP_003672517.1 PFAM: protein of unknown function DUF402; KEGG: gyc:GYMC61_1350 protein of unknown function DUF402 YP_003672518.1 KEGG: gyc:GYMC61_1349 hypothetical protein YP_003672519.1 KEGG: gka:GK0466 gamma-type small acid-soluble spore protein; TIGRFAM: small, acid-soluble spore protein, gamma-type; PFAM: acid-soluble spore protein gamma-type YP_003672520.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_1347 short-chain dehydrogenase/reductase SDR YP_003672521.1 KEGG: gyc:GYMC61_1346 hypothetical protein YP_003672522.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: gyc:GYMC61_1345 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_003672523.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK0462 oxalate:formate antiporter YP_003672524.1 KEGG: gyc:GYMC61_1343 formate dehydrogenase family accessory protein FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_003672525.1 PFAM: protein of unknown function DUF2294; KEGG: gyc:GYMC61_1342 protein of unknown function DUF2294 YP_003672526.1 KEGG: gyc:GYMC61_1341 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molydopterin dinucleotide-binding region YP_003672527.1 PFAM: protein of unknown function DUF1641; KEGG: gyc:GYMC61_1340 protein of unknown function DUF1641 YP_003672528.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: gyc:GYMC61_1338 membrane-bound metal-dependent hydrolase YP_003672529.1 KEGG: gyc:GYMC61_1337 small, acid-soluble spore protein K; TIGRFAM: small, acid-soluble spore protein K; PFAM: small acid-soluble spore K family protein YP_003672530.1 KEGG: gyc:GYMC61_1336 hypothetical protein YP_003672531.1 PFAM: protein of unknown function DUF1811; KEGG: gyc:GYMC61_1335 protein of unknown function DUF1811 YP_003672532.1 PFAM: regulatory protein RecX; KEGG: gyc:GYMC61_1334 regulatory protein RecX YP_003672533.1 PFAM: hypothetical protein; dTDP-4-dehydrorhamnose reductase; KEGG: gyc:GYMC61_1333 domain of unknown function DUF1731 YP_003672534.1 KEGG: gyc:GYMC61_1332 hypothetical protein YP_003672535.1 KEGG: gyc:GYMC61_1331 hypothetical protein YP_003672536.1 KEGG: gyc:GYMC61_1330 hypothetical protein YP_003672537.1 PFAM: glycosyl transferase family 8; KEGG: gyc:GYMC61_1329 glycosyl transferase family 8 YP_003672538.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gyc:GYMC61_1328 L-carnitine dehydratase/bile acid-inducible protein F YP_003672539.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_1327 acyl-CoA dehydrogenase domain protein YP_003672540.1 KEGG: gyc:GYMC61_1326 hypothetical protein YP_003672541.1 PFAM: protein of unknown function DUF2309; KEGG: gka:GK0443 hypothetical protein YP_003672542.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gyc:GYMC61_1324 NADH/ubiquinone/plastoquinone (complex I) YP_003672543.1 PFAM: protein of unknown function DUF2294; KEGG: gyc:GYMC61_1323 protein of unknown function DUF2294 YP_003672544.1 PFAM: ABC transporter ATPase; KEGG: gyc:GYMC61_1322 ABC transporter ATPase YP_003672545.1 PFAM: protein of unknown function UPF0061; KEGG: gyc:GYMC61_1318 protein of unknown function UPF0061 YP_003672546.1 KEGG: gyc:GYMC61_1317 hypothetical protein YP_003672547.1 KEGG: gyc:GYMC61_1316 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_003672548.1 KEGG: gyc:GYMC61_1315 integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003672549.1 PFAM: cell wall-active antibiotics response protein; KEGG: gyc:GYMC61_1314 cell wall-active antibiotics response protein YP_003672550.1 PFAM: PspA/IM30 family protein; KEGG: gyc:GYMC61_1313 phage shock protein A, PspA YP_003672551.1 KEGG: gyc:GYMC61_1312 hypothetical protein YP_003672552.1 KEGG: gyc:GYMC61_1308 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (uracil-5)-methyltransferase YP_003672553.1 KEGG: gyc:GYMC61_1307 DNA-3-methyladenine glycosylase II; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_003672554.1 KEGG: gyc:GYMC61_1306 delta-lactam-biosynthetic de-N-acetylase; TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase YP_003672555.1 KEGG: gyc:GYMC61_1305 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha; hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region YP_003672556.1 PFAM: YfkB-like domain protein; radical SAM domain protein; KEGG: gyc:GYMC61_1304 YfkB-like domain protein YP_003672557.1 KEGG: gyc:GYMC61_1303 hypothetical protein YP_003672558.1 KEGG: gyc:GYMC61_1302 calcium/proton antiporter, CaCA family; TIGRFAM: calcium/proton antiporter, CaCA family; calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region YP_003672559.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_1301 major facilitator superfamily MFS_1 YP_003672560.1 KEGG: gyc:GYMC61_1300 hypothetical protein YP_003672561.1 KEGG: gyc:GYMC61_1299 hypothetical protein YP_003672562.1 KEGG: gyc:GYMC61_1298 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_003672563.1 manually curated; PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: gka:GK0419 protein-tyrosine phosphatase; SMART: protein-tyrosine phosphatase, low molecular weight YP_003672565.1 PFAM: protein of unknown function DUF1128; KEGG: gka:GK0418 hypothetical protein YP_003672566.1 KEGG: gyc:GYMC61_1294 phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase YP_003672567.1 KEGG: gtn:GTNG_0388 sodium-dependent phosphate transporter YP_003672568.1 TIGRFAM: sulfate adenylyltransferase; KEGG: gyc:GYMC61_1292 sulfate adenylyltransferase; PFAM: ATP-sulfurylase YP_003672569.1 TIGRFAM: adenylylsulfate kinase; KEGG: gyc:GYMC61_1291 adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_003672570.1 KEGG: gyc:GYMC61_1290 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003672571.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gyc:GYMC61_1289 cobalamin (vitamin B12) biosynthesis CbiX protein YP_003672572.1 PFAM: acylphosphatase; KEGG: gyc:GYMC61_1288 acylphosphatase YP_003672573.1 KEGG: gyc:GYMC61_1287 hypothetical protein YP_003672574.1 PFAM: protein of unknown function DUF1806; KEGG: gyc:GYMC61_1286 protein of unknown function DUF1806 YP_003672575.1 PFAM: LmbE family protein; KEGG: gyc:GYMC61_1285 LmbE family protein YP_003672576.1 TIGRFAM: siroheme synthase; KEGG: gyc:GYMC61_1283 siroheme synthase YP_003672577.1 PFAM: transposase IS4 family protein; KEGG: gyc:GYMC61_2377 transposase IS4 family protein YP_003672578.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcg:BCG9842_B4370 transporter major facilitator family YP_003672579.1 KEGG: nph:NP3536A signal-transducing histidine kinase YP_003672580.1 KEGG: sdn:Sden_1802 hypothetical protein YP_003672581.1 KEGG: pmr:PMI3394 dTDP-6-deoxy-D-glucose-3,5-epimerase YP_003672582.1 TIGRFAM: enolase; KEGG: gyc:GYMC61_3133 enolase; PFAM: Enolase-like YP_003672583.1 TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: gyc:GYMC61_3134 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein YP_003672584.1 TIGRFAM: triosephosphate isomerase; KEGG: gyc:GYMC61_3135 triosephosphate isomerase; PFAM: triosephosphate isomerase YP_003672585.1 KEGG: gka:GK3057 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_003672586.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gyc:GYMC61_3137 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003672587.1 PFAM: sugar-binding domain protein; KEGG: gyc:GYMC61_3138 DeoR family transcriptional regulator YP_003672588.1 PFAM: glutaredoxin 2; KEGG: gtn:GTNG_3009 glutaredoxin YP_003672589.1 KEGG: gyc:GYMC61_3140 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_003672590.1 TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP; KEGG: gyc:GYMC61_3143 ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003672591.1 KEGG: gka:GK3063 phosphocarrier protein Chr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003672592.1 PFAM: protein of unknown function DUF199; sporulation regulator WhiA-like; KEGG: gyc:GYMC61_3145 protein of unknown function DUF199 YP_003672593.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: gyc:GYMC61_3146 protein of unknown function UPF0052 and CofD YP_003672594.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_3147 hypothetical protein YP_003672595.1 PFAM: NUDIX hydrolase; KEGG: gyc:GYMC61_3148 NUDIX hydrolase YP_003672596.1 KEGG: gyc:GYMC61_3149 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003672597.1 KEGG: gyc:GYMC61_3150 tetratricopeptide TPR_2 repeat protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat YP_003672598.1 KEGG: gyc:GYMC61_3151 phosphoribosyl-ATP diphosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase YP_003672599.1 KEGG: gyc:GYMC61_3152 imidazoleglycerol phosphate synthase, cyclase subunit; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_003672600.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: gka:GK3072 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_003672601.1 KEGG: gyc:GYMC61_3154 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_003672602.1 KEGG: gyc:GYMC61_3155 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_003672603.1 TIGRFAM: histidinol dehydrogenase; KEGG: gyc:GYMC61_3156 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003672604.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: gyc:GYMC61_3157 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_003672605.1 TIGRFAM: histidyl-tRNA synthetase 2; KEGG: gyc:GYMC61_3158 histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S) YP_003672606.1 KEGG: gyc:GYMC61_3159 hypothetical protein YP_003672607.1 KEGG: gyc:GYMC61_3160 hypothetical protein YP_003672608.1 PFAM: VanZ family protein; KEGG: gyc:GYMC61_3164 VanZ family protein YP_003672609.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: gyc:GYMC61_3167 transferase hexapeptide repeat containing protein YP_003672610.1 KEGG: gyc:GYMC61_3168 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003672611.1 PFAM: nucleoside recognition domain protein; KEGG: gyc:GYMC61_3169 nucleoside recognition domain protein YP_003672612.1 KEGG: gyc:GYMC61_3170 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_003672613.1 KEGG: gyc:GYMC61_3171 HPr kinase; TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain protein YP_003672614.1 KEGG: gka:GK3083 hypothetical protein; manually curated; PFAM: membrane protein of unknown function YP_003672615.1 KEGG: gyc:GYMC61_3173 hypothetical protein YP_003672616.1 KEGG: gyc:GYMC61_3174 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter YP_003672617.1 TIGRFAM: excinuclease ABC subunit B; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: gyc:GYMC61_3175 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase YP_003672618.1 PFAM: protein of unknown function DUF2198; KEGG: gyc:GYMC61_3176 protein of unknown function DUF2198 YP_003672619.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: gyc:GYMC61_3177 PDZ/DHR/GLGF domain protein YP_003672620.1 PFAM: regulatory protein MerR; KEGG: gyc:GYMC61_3178 MerR family transcriptional regulator YP_003672621.1 KEGG: gyc:GYMC61_3179 hypothetical protein YP_003672622.1 PFAM: glycosyl transferase family 2; KEGG: gyc:GYMC61_3180 glycosyl transferase family 2 YP_003672623.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; peptidoglycan-binding protein; KEGG: gyc:GYMC61_3181 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003672624.1 PFAM: pirin; KEGG: gyc:GYMC61_3182 pirin domain protein YP_003672625.1 KEGG: gyc:GYMC61_3183 hypothetical protein YP_003672626.1 TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: gyc:GYMC61_3184 MerR family transcriptional regulator; SMART: regulatory protein MerR YP_003672627.1 KEGG: gyc:GYMC61_3185 mercuric reductase; TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003672628.1 PFAM: MerE family protein; KEGG: gyc:GYMC61_3186 transporter YP_003672629.1 PFAM: peptidase M23; KEGG: gyc:GYMC61_3187 peptidase M23 YP_003672630.1 PFAM: protein of unknown function DUF214; KEGG: gyc:GYMC61_3188 protein of unknown function DUF214 YP_003672631.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: gyc:GYMC61_3189 cell division ATP-binding protein FtsE; SMART: ATPase AAA YP_003672632.1 PFAM: cytochrome C class I; KEGG: gyc:GYMC61_3190 cytochrome C class I YP_003672633.1 PFAM: protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: gyc:GYMC61_3191 protein of unknown function DUF2179 YP_003672634.1 PFAM: plasmid stabilization system; KEGG: gyc:GYMC61_3192 plasmid stabilization system YP_003672635.1 KEGG: gka:GK3105 hypothetical protein YP_003672636.1 manually curated; KEGG: bpm:BURPS1710b_3602 hypothetical protein YP_003672637.1 KEGG: gyc:GYMC61_3195 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase; SecA Wing and Scaffold; SEC-C motif domain protein YP_003672638.1 KEGG: gka:GK3108 hypothetical protein YP_003672639.1 KEGG: gyc:GYMC61_3197 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_003672640.1 KEGG: gtn:GTNG_3051 hypothetical protein YP_003672641.1 KEGG: gka:GK3112 flagellar protein YP_003672642.1 KEGG: gka:GK3113 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_003672643.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; flagellin hook IN repeat protein; KEGG: gyc:GYMC61_3201 flagellar hook-associated 2 domain protein YP_003672644.1 PFAM: flagellar protein FlaG protein; KEGG: gyc:GYMC61_3202 flagellar protein FlaG protein YP_003672645.1 KEGG: esi:Exig_2442 LAGLIDADG DNA endonuclease YP_003672646.1 PFAM: flagellin domain protein; KEGG: tpd:Teth39_1779 flagellin domain-containing protein YP_003672647.1 KEGG: gyc:GYMC61_3224 carbon storage regulator, CsrA; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator YP_003672648.1 PFAM: protein of unknown function DUF180; KEGG: gyc:GYMC61_3225 protein of unknown function DUF180 YP_003672649.1 KEGG: gyc:GYMC61_3226 hypothetical protein YP_003672650.1 KEGG: gyc:GYMC61_3227 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_003672651.1 KEGG: gka:GK3137 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003672652.1 PFAM: FlgN family protein; KEGG: gka:GK3138 hypothetical protein YP_003672653.1 PFAM: anti-sigma-28 factor FlgM family protein; KEGG: gka:GK3139 anti-sigma factor repressor of sigma-D-dependent transcription (negative regulator of flagellin synthesis) (anti-sigma-D factor) YP_003672654.1 KEGG: gyc:GYMC61_3231 hypothetical protein YP_003672655.1 PFAM: protein of unknown function DUF327; KEGG: gyc:GYMC61_3232 protein of unknown function DUF327 YP_003672656.1 PFAM: flagellin domain protein; KEGG: gyc:GYMC61_3233 flagellin domain protein YP_003672657.1 KEGG: gka:GK3143 flagellar biosynthesis; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_003672658.1 PFAM: type III secretion exporter; KEGG: gyc:GYMC61_3235 flagellar biosynthesis protein YP_003672659.1 KEGG: gyc:GYMC61_3236 hypothetical protein YP_003672660.1 PFAM: phosphoribosyltransferase; Papillomavirus E7; KEGG: gyc:GYMC61_3237 late competence protein YP_003672661.1 KEGG: gyc:GYMC61_3238 helicase; PFAM: helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase YP_003672662.1 KEGG: gyc:GYMC61_3239 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003672663.1 KEGG: gka:GK3150 two-component response regulator (extracellular proteinase response regulator); PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003672664.1 KEGG: gyc:GYMC61_3241 histidine kinase; PFAM: Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003672665.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: gyc:GYMC61_3242 protein of unknown function UPF0029 YP_003672666.1 KEGG: gyc:GYMC61_3243 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator YP_003672667.1 PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; protein of unknown function DUF1058; KEGG: gyc:GYMC61_3244 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SH3 domain protein YP_003672668.1 KEGG: gyc:GYMC61_3246 SH3 type 3 domain protein; PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein YP_003672669.1 KEGG: gyc:GYMC61_3247 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: stage II sporulation D domain protein YP_003672670.1 PFAM: glycosyl transferase group 1; KEGG: gyc:GYMC61_3248 glycosyl transferase group 1 YP_003672671.1 KEGG: gyc:GYMC61_3249 hypothetical protein YP_003672672.1 PFAM: glycosyl transferase group 1; KEGG: gyc:GYMC61_3250 glycosyl transferase group 1 YP_003672673.1 PFAM: glycosyl transferase group 1; KEGG: gyc:GYMC61_3251 glycosyl transferase group 1 YP_003672674.1 KEGG: gyc:GYMC61_3252 hypothetical protein YP_003672675.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: gyc:GYMC61_3253 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003672676.1 PFAM: polysaccharide biosynthesis protein; KEGG: gyc:GYMC61_3254 polysaccharide biosynthesis protein YP_003672677.1 KEGG: gyc:GYMC61_3255 acetyltransferase YP_003672678.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: gka:GK3165 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003672679.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: gyc:GYMC61_3257 oxidoreductase domain protein YP_003672680.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: gyc:GYMC61_3258 lipopolysaccharide biosynthesis protein YP_003672681.1 KEGG: gyc:GYMC61_3259 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_003672682.1 PFAM: glycosyl transferase, family 4, conserved region; KEGG: gyc:GYMC61_3260 glycosyl transferase, family 4, conserved region YP_003672683.1 KEGG: gyc:GYMC61_3262 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase; SecA Wing and Scaffold YP_003672684.1 KEGG: gyc:GYMC61_3263 hypothetical protein YP_003672685.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: gyc:GYMC61_3264 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003672686.1 KEGG: gyc:GYMC61_3265 hypothetical protein YP_003672687.1 KEGG: gyc:GYMC61_3266 hypothetical protein YP_003672688.1 KEGG: gyc:GYMC61_3267 hypothetical protein YP_003672689.1 PFAM: SCP-like extracellular; KEGG: gyc:GYMC61_3268 SCP-like extracellular YP_003672690.1 KEGG: gyc:GYMC61_3269 hypothetical protein YP_003672691.1 KEGG: gyc:GYMC61_3272 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; Fibronectin type III domain protein; SMART: alpha amylase catalytic sub domain; Fibronectin type III domain protein; alpha amylase all-beta YP_003672692.1 KEGG: gyc:GYMC61_3273 glucan 1,4-alpha-maltohexaosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003672693.1 PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: gyc:GYMC61_3274 5'-nucleotidase domain protein YP_003672694.1 KEGG: gyc:GYMC61_3276 hypothetical protein YP_003672695.1 KEGG: gka:GK3183 hypothetical protein YP_003672696.1 KEGG: gka:GK3184 hypothetical protein YP_003672697.1 KEGG: gka:GK3185 hypothetical protein YP_003672698.1 KEGG: gyc:GYMC61_3276 hypothetical protein YP_003672699.1 KEGG: gyc:GYMC61_3277 hypothetical protein YP_003672700.1 KEGG: gyc:GYMC61_3283 hypothetical protein YP_003672701.1 KEGG: gyc:GYMC61_3285 hypothetical protein YP_003672702.1 PFAM: NLP/P60 protein; peptidoglycan-binding domain 1 protein; KEGG: gyc:GYMC61_3286 NLP/P60 protein YP_003672703.1 KEGG: gyc:GYMC61_3287 hypothetical protein YP_003672704.1 KEGG: gyc:GYMC61_3288 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003672705.1 KEGG: gyc:GYMC61_3289 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003672706.1 KEGG: gyc:GYMC61_3290 hypothetical protein YP_003672707.1 KEGG: gyc:GYMC61_3291 sortase family protein; TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B YP_003672708.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: gyc:GYMC61_3292 LPXTG-motif cell wall anchor domain protein YP_003672709.1 KEGG: gka:GK3195 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003672711.1 PFAM: protein of unknown function DUF1284; KEGG: gyc:GYMC61_3294 protein of unknown function DUF1284 YP_003672712.1 KEGG: gka:GK3197 hypothetical protein YP_003672713.1 PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_3296 aldehyde dehydrogenase (NAD(+)) YP_003672714.1 PFAM: protein of unknown function DUF779; KEGG: gyc:GYMC61_3297 protein of unknown function DUF779 YP_003672715.1 KEGG: gyc:GYMC61_3298 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003672716.1 PFAM: regulatory protein TetR; KEGG: gyc:GYMC61_3299 TetR family transcriptional regulator YP_003672717.1 KEGG: gyc:GYMC61_3300 hypothetical protein YP_003672718.1 PFAM: ROK family protein; KEGG: gyc:GYMC61_3301 ROK family protein YP_003672719.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3205 ABC transporter permease YP_003672720.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gyc:GYMC61_3303 binding-protein-dependent transport systems inner membrane component YP_003672721.1 PFAM: extracellular solute-binding protein family 1; KEGG: gyc:GYMC61_3304 extracellular solute-binding protein family 1 YP_003672722.1 KEGG: gyc:GYMC61_3305 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver YP_003672723.1 KEGG: gyc:GYMC61_3306 integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein YP_003672724.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gyc:GYMC61_3307 periplasmic binding protein/LacI transcriptional regulator YP_003672725.1 PFAM: glycoside hydrolase family 4; KEGG: gyc:GYMC61_3310 glycoside hydrolase family 4 YP_003672726.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: gyc:GYMC61_3311 RpiR family transcriptional regulator YP_003672727.1 KEGG: gyc:GYMC61_3313 hypothetical protein YP_003672728.1 KEGG: gyc:GYMC61_3314 ABC transporter protein; PFAM: ABC transporter; protein of unknown function DUF214; SMART: ATPase AAA YP_003672729.1 PFAM: peptidase M50; KEGG: mmw:Mmwyl1_0300 hypothetical protein YP_003672730.1 KEGG: gyc:GYMC61_3315 hypothetical protein YP_003672731.1 KEGG: gka:GK2356 hypothetical protein YP_003672732.1 PFAM: FAD linked oxidase; KEGG: gyc:GYMC61_3317 FAD linked oxidase YP_003672733.1 PFAM: transketolase; transketolase domain protein; KEGG: gka:GK3216 pyruvate dehydrogenase E1 (lipoamide) subunit beta YP_003672734.1 TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; KEGG: gyc:GYMC61_3319 pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component YP_003672735.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gyc:GYMC61_3320 catalytic domain of components of various dehydrogenase complexes YP_003672736.1 KEGG: afl:Aflv_1254 hypothetical protein YP_003672737.1 KEGG: afl:Aflv_1253 hypothetical protein YP_003672738.1 PFAM: oxidoreductase domain protein; KEGG: gyc:GYMC61_3322 oxidoreductase domain protein YP_003672739.1 KEGG: gyc:GYMC61_3323 hypothetical protein YP_003672740.1 SMART: protein-tyrosine phosphatase, low molecular weight; TIGRFAM: arsenate reductase (thioredoxin); KEGG: gyc:GYMC61_3324 arsenate reductase (thioredoxin); PFAM: protein-tyrosine phosphatase, low molecular weight YP_003672741.1 KEGG: gyc:GYMC61_3325 arsenic resistance protein; TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter YP_003672742.1 KEGG: gyc:GYMC61_3326 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003672743.1 PFAM: protein of unknown function DUF1360; KEGG: gyc:GYMC61_3327 protein of unknown function DUF1360 YP_003672744.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gyc:GYMC61_3328 periplasmic binding protein/LacI transcriptional regulator YP_003672745.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_3329 inner-membrane translocator YP_003672746.1 KEGG: gyc:GYMC61_3330 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672747.1 PFAM: RbsD or FucU transport; KEGG: gyc:GYMC61_3331 RbsD or FucU transport YP_003672748.1 KEGG: gyc:GYMC61_3332 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein YP_003672749.1 KEGG: gyc:GYMC61_3333 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003672750.1 KEGG: gyc:GYMC61_3334 hypothetical protein YP_003672751.1 KEGG: gyc:GYMC61_3335 hypothetical protein YP_003672752.1 PFAM: VanZ family protein; KEGG: gyc:GYMC61_3336 VanZ family protein YP_003672753.1 KEGG: gka:GK3234 hypothetical protein YP_003672754.1 KEGG: gka:GK3235 hypothetical protein YP_003672755.1 TIGRFAM: amidohydrolase; KEGG: gyc:GYMC61_3340 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003672756.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: gyc:GYMC61_3344 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003672757.1 PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; KEGG: gyc:GYMC61_3345 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SH3 domain protein YP_003672758.1 PFAM: SEC-C motif domain protein; KEGG: gyc:GYMC61_3351 sec-C motif domain protein YP_003672759.1 PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: gyc:GYMC61_3347 plasmid pRiA4b ORF-3 family protein YP_003672760.1 PFAM: SEC-C motif domain protein; KEGG: gyc:GYMC61_3349 sec-C motif domain protein YP_003672761.1 PFAM: SEC-C motif domain protein; KEGG: gyc:GYMC61_3351 sec-C motif domain protein YP_003672762.1 PFAM: SEC-C motif domain protein; KEGG: gyc:GYMC61_3352 sec-C motif domain protein YP_003672763.1 PFAM: zinc finger SWIM domain protein; KEGG: gyc:GYMC61_3353 zinc finger SWIM domain protein YP_003672764.1 KEGG: gyc:GYMC61_3354 SNF2-related protein; PFAM: SNF2-related protein; helicase; SMART: DEAD-like helicase ; helicase YP_003672765.1 KEGG: gka:GK3263 hypothetical protein YP_003672766.1 PFAM: protein of unknown function DUF1861; KEGG: gka:GK3264 hypothetical protein YP_003672767.1 KEGG: gyc:GYMC61_3357 Appr-1-p processing domain protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_003672768.1 KEGG: gyc:GYMC61_3359 hypothetical protein YP_003672769.1 KEGG: gyc:GYMC61_3360 hypothetical protein YP_003672770.1 KEGG: gyc:GYMC61_3361 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase YP_003672771.1 PFAM: glycosidase PH1107-related; KEGG: gka:GK3270 hypothetical protein YP_003672772.1 PFAM: protein of unknown function DUF1861; KEGG: gyc:GYMC61_3363 protein of unknown function DUF1861 YP_003672773.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gka:GK3272 sugar ABC transporter permease YP_003672774.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gyc:GYMC61_3369 protein of unknown function DUF6 transmembrane YP_003672775.1 KEGG: gyc:GYMC61_3370 hypothetical protein YP_003672776.1 KEGG: gwc:GWCH70_3221 hypothetical protein YP_003672777.1 KEGG: gyc:GYMC61_3372 ErfK/YbiS/YcfS/YnhG family protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003672778.1 KEGG: gyc:GYMC61_3373 hypothetical protein YP_003672779.1 KEGG: hch:HCH_03648 elongation factor G YP_003672780.1 PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_3461 sugar transporter YP_003672781.1 KEGG: gtn:GTNG_3233 hypothetical protein YP_003672782.1 PFAM: protein of unknown function DUF2081; protein of unknown function DUF262; KEGG: gka:GK3283 hypothetical protein YP_003672783.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK3284 acetyltransferase YP_003672785.1 KEGG: gwc:GWCH70_3253 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_003672786.1 KEGG: bwe:BcerKBAB4_3388 YvfD; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; PFAM: transferase YP_003672787.1 KEGG: gwc:GWCH70_3256 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase YP_003672788.1 KEGG: bsu:BSU38860 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003672789.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: afl:Aflv_2667 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003672790.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bha:BH3709 nucleotide sugar epimerase (biosynthesis of lipopolysaccharide O antigen) YP_003672791.1 PFAM: glycosyl transferase group 1; KEGG: pjd:Pjdr2_0361 undecaprenyl-phosphate galactose phosphotransferase YP_003672792.1 PFAM: glycosyl transferase group 1; KEGG: pca:Pcar_1523 glycosyltransferase YP_003672793.1 KEGG: bcg:BCG9842_B5560 hypothetical protein YP_003672794.1 PFAM: glycosyl transferase group 1; KEGG: cpo:COPRO5265_0429 glycosyl transferase, group 1 family protein YP_003672795.1 PFAM: polysaccharide biosynthesis protein; KEGG: pca:Pcar_1525 polysaccharide biosynthesis protein YP_003672796.1 KEGG: bpu:BPUM_3211 sugar transferase; PFAM: sugar transferase YP_003672797.1 KEGG: gtn:GTNG_3264 UDP-glucose pyrophosphorylase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase YP_003672798.1 KEGG: gka:GK3321 hypothetical protein YP_003672799.1 KEGG: gyc:GYMC61_3382 hypothetical protein YP_003672800.1 KEGG: gyc:GYMC61_3383 hypothetical protein YP_003672801.1 KEGG: gyc:GYMC61_3384 protein-tyrosine-phosphatase; PFAM: PHP domain protein YP_003672802.1 KEGG: gyc:GYMC61_3385 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator YP_003672803.1 KEGG: gka:GK3325 hypothetical protein YP_003672804.1 KEGG: gka:GK3326 capsular polysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family YP_003672805.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: gyc:GYMC61_3388 lipopolysaccharide biosynthesis protein YP_003672806.1 KEGG: gka:GK3328 hypothetical protein YP_003672807.1 KEGG: gka:GK3329 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003672808.1 KEGG: gka:GK3330 hypothetical protein YP_003672809.1 KEGG: gyc:GYMC61_3392 fagellar hook-basal body protein; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003672810.1 KEGG: gyc:GYMC61_3393 fagellar hook-basal body protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003672811.1 KEGG: gyc:GYMC61_3394 cell shape determining protein, MreB/Mrl family; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_003672812.1 TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: gyc:GYMC61_3395 sporulation transcriptional regulator SpoIIID YP_003672813.1 KEGG: gyc:GYMC61_3396 intracellular proteinase inhibitor (BsuPI) YP_003672814.1 PFAM: Chromate transporter; KEGG: gka:GK3337 chromate transporter YP_003672815.1 KEGG: gyc:GYMC61_3397 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_003672816.1 PFAM: peptidase M23; KEGG: gyc:GYMC61_3398 peptidase M23 YP_003672817.1 KEGG: gyc:GYMC61_3399 stage II sporulation protein D; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: stage II sporulation D domain protein YP_003672818.1 KEGG: gyc:GYMC61_3400 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003672819.1 PFAM: protein of unknown function DUF1779; KEGG: gyc:GYMC61_3401 protein of unknown function DUF1779 YP_003672820.1 KEGG: gyc:GYMC61_3402 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: conserved hypothetical protein YP_003672821.1 KEGG: gyc:GYMC61_3403 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003672822.1 KEGG: gyc:GYMC61_3404 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003672823.1 KEGG: gka:GK3347 NADH dehydrogenase subunit L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003672824.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gyc:GYMC61_3406 NADH-ubiquinone oxidoreductase chain 4L YP_003672825.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: gyc:GYMC61_3407 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_003672826.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gyc:GYMC61_3408 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003672827.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: gyc:GYMC61_3409 NADH dehydrogenase (quinone) YP_003672828.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: gka:GK3353 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_003672829.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: gka:GK3354 NADH dehydrogenase subunit C YP_003672830.1 TIGRFAM: NADH-quinone oxidoreductase subunit beta; KEGG: gyc:GYMC61_3412 NADH-quinone oxidoreductase subunit beta; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003672831.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: gyc:GYMC61_3413 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_003672832.1 KEGG: gyc:GYMC61_3414 ATP synthase F1 epsilon subunit; TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/subunit epsilon-like YP_003672833.1 TIGRFAM: ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; KEGG: gyc:GYMC61_3415 ATP synthase F1 subunit beta; SMART: ATPase AAA YP_003672834.1 KEGG: gyc:GYMC61_3416 ATP synthase F1 gamma subunit; TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase subunit gamma YP_003672835.1 KEGG: gyc:GYMC61_3417 ATP synthase F1 alpha subunit; TIGRFAM: ATP synthase F1 subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_003672836.1 KEGG: gka:GK3361 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_003672837.1 KEGG: gyc:GYMC61_3419 ATP synthase F0 subunit beta; TIGRFAM: ATP synthase F0 subunit beta; PFAM: H+transporting two-sector ATPase B/B' subunit YP_003672838.1 KEGG: gyc:GYMC61_3420 ATP synthase F0 C subunit; TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_003672839.1 KEGG: gyc:GYMC61_3421 ATP synthase F0 subunit alpha; TIGRFAM: ATP synthase F0 subunit alpha; PFAM: H+transporting two-sector ATPase subunit alpha YP_003672840.1 PFAM: ATP synthase I; KEGG: gyc:GYMC61_3422 ATP synthase I YP_003672841.1 KEGG: gyc:GYMC61_3423 hypothetical protein YP_003672842.1 KEGG: gyc:GYMC61_3424 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003672843.1 KEGG: gyc:GYMC61_3425 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_003672844.1 PFAM: conserved hypothetical protein; KEGG: gyc:GYMC61_3426 hypothetical protein YP_003672845.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: gyc:GYMC61_3427 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: ribose/galactose isomerase YP_003672846.1 KEGG: gyc:GYMC61_3428 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003672847.1 KEGG: gyc:GYMC61_3429 protein tyrosine phosphatase; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_003672848.1 KEGG: gyc:GYMC61_3430 hypothetical protein YP_003672849.1 PFAM: protein of unknown function DUF204; KEGG: gyc:GYMC61_3431 protein of unknown function DUF204 YP_003672850.1 KEGG: gka:GK3375 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein YP_003672851.1 KEGG: gyc:GYMC61_3433 stage II sporulation protein R; TIGRFAM: stage II sporulation protein R; PFAM: sporulation stage II protein R YP_003672852.1 KEGG: gyc:GYMC61_3434 protein-(glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_003672853.1 KEGG: gyc:GYMC61_3435 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein YP_003672854.1 KEGG: gka:GK3379 hypothetical protein YP_003672855.1 KEGG: gyc:GYMC61_3437 thymidine kinase; PFAM: thymidine kinase YP_003672856.1 KEGG: gyc:GYMC61_3438 ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_003672857.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: gyc:GYMC61_3439 transcription termination factor Rho; SMART: Cold shock protein; ATPase AAA YP_003672858.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: gyc:GYMC61_3440 fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein YP_003672859.1 KEGG: gyc:GYMC61_3441 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003672860.1 KEGG: gyc:GYMC61_3442 transaldolase; TIGRFAM: transaldolase; PFAM: transaldolase YP_003672861.1 TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: gyc:GYMC61_3443 fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II YP_003672862.1 KEGG: gyc:GYMC61_3444 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003672863.1 PFAM: protein of unknown function DUF2529; KEGG: gyc:GYMC61_3445 protein of unknown function DUF2529 YP_003672864.1 TIGRFAM: CTP synthase; KEGG: gka:GK3389 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003672865.1 PFAM: DNA-directed RNA polymerase subunit delta; KEGG: gka:GK3390 DNA-directed RNA polymerase subunit delta YP_003672866.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: gyc:GYMC61_3448 methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; ArgK protein; cobalamin B12-binding domain protein YP_003672867.1 KEGG: gyc:GYMC61_3449 transcriptional regulator, TetR family; manually curated; PFAM: regulatory protein TetR YP_003672868.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_3450 acyl-CoA dehydrogenase domain protein YP_003672869.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_3451 acyl-CoA dehydrogenase domain protein YP_003672870.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_3452 3-hydroxybutyryl-CoA dehydrogenase YP_003672871.1 KEGG: gyc:GYMC61_3453 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003672872.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gyc:GYMC61_3454 protein of unknown function DUF224 cysteine-rich region domain protein YP_003672873.1 KEGG: gyc:GYMC61_3455 phospholipase D/transphosphatidylase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_003672874.1 TIGRFAM: XapX domain protein; KEGG: gyc:GYMC61_3456 XapX domain protein YP_003672875.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: gyc:GYMC61_3457 arginyl-tRNA synthetase YP_003672876.1 PFAM: Domain of unknown function DUF1934; KEGG: gyc:GYMC61_3458 domain of unknown function DUF1934 YP_003672877.1 KEGG: gka:GK3403 hypothetical protein YP_003672878.1 KEGG: gyc:GYMC61_3460 agmatinase; TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase YP_003672879.1 KEGG: gyc:GYMC61_3461 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_003672880.1 KEGG: gyc:GYMC61_3462 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003672881.1 PFAM: protein of unknown function YwhD; KEGG: gka:GK3407 hypothetical protein YP_003672882.1 PFAM: peptidase M50; KEGG: gyc:GYMC61_3464 peptidase M50 YP_003672883.1 KEGG: gyc:GYMC61_3465 4-oxalocrotonate tautomerase family enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_003672884.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: gyc:GYMC61_3466 xanthine/uracil/vitamin C permease YP_003672885.1 KEGG: gyc:GYMC61_3467 hypothetical protein YP_003672886.1 KEGG: gyc:GYMC61_3468 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003672887.1 KEGG: gyc:GYMC61_3469 hypothetical protein YP_003672888.1 TIGRFAM: transcription factor, RsfA family; KEGG: gyc:GYMC61_3470 transcription factor, RsfA family YP_003672889.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: gyc:GYMC61_3471 biotin/lipoate A/B protein ligase YP_003672890.1 KEGG: gyc:GYMC61_3472 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_003672891.1 PFAM: chlorite dismutase; KEGG: gka:GK3416 heme peroxidase YP_003672892.1 PFAM: cell wall hydrolase SleB; KEGG: gka:GK3417 cell wall hydrolase (sporulation) YP_003672893.1 KEGG: gka:GK3418 hypothetical protein; TIGRFAM: spore coat protein GerQ; PFAM: Spore coat protein GerQ YP_003672894.1 PFAM: protein of unknown function DUF423; KEGG: gka:GK3419 hypothetical protein YP_003672895.1 KEGG: gka:GK3420 hypothetical protein YP_003672896.1 KEGG: gka:GK3421 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: uracil-DNA glycosylase superfamily YP_003672897.1 PFAM: protein of unknown function DUF1232; KEGG: gyc:GYMC61_3485 protein of unknown function DUF1232 YP_003672898.1 KEGG: gyc:GYMC61_3486 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS YP_003672899.1 PFAM: ATP-binding region ATPase domain protein; KEGG: gyc:GYMC61_3487 anti-sigma regulatory factor, serine/threonine protein kinase YP_003672900.1 KEGG: gyc:GYMC61_3488 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein YP_003672901.1 TIGRFAM: PAS sensor protein; PFAM: stage II sporulation E family protein; hypothetical protein; KEGG: gyc:GYMC61_3489 PAS/PAC sensor protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein YP_003672902.1 PFAM: PemK family protein; KEGG: gyc:GYMC61_3490 MazF family transcriptional regulator YP_003672903.1 KEGG: gyc:GYMC61_3491 hypothetical protein YP_003672904.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: gyc:GYMC61_3492 NAD(P)H dehydrogenase (quinone) YP_003672905.1 KEGG: gyc:GYMC61_3493 hypothetical protein YP_003672906.1 KEGG: gyc:GYMC61_3494 glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein YP_003672907.1 PFAM: glycosyl transferase family 2; KEGG: gyc:GYMC61_3495 glycosyl transferase family 2 YP_003672908.1 KEGG: gyc:GYMC61_3496 hypothetical protein YP_003672909.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_3497 major facilitator superfamily MFS_1 YP_003672910.1 KEGG: bsu:BSU25890 hypothetical protein; skin element YP_003672911.1 KEGG: gka:GK3434 hypothetical protein YP_003672912.1 PFAM: transposase IS3/IS911 family protein; KEGG: gka:GK3440 transposase YP_003672913.1 KEGG: gyc:GYMC61_3509 PTS system, glucose subfamily, IIA subunit; TIGRFAM: PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain YP_003672914.1 KEGG: gyc:GYMC61_3511 PucR family transcriptional regulator YP_003672915.1 TIGRFAM: alanine dehydrogenase; KEGG: gyc:GYMC61_3512 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003672916.1 PFAM: protein of unknown function DUF820; KEGG: gyc:GYMC61_3513 protein of unknown function DUF820 YP_003672917.1 KEGG: gyc:GYMC61_3514 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_003672918.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gyc:GYMC61_3515 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003672919.1 KEGG: gyc:GYMC61_3516 sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003672920.1 KEGG: gyc:GYMC61_3517 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_003672921.1 KEGG: gyc:GYMC61_3518 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003672922.1 KEGG: gyc:GYMC61_3519 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003672923.1 KEGG: gka:GK1987 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003672924.1 KEGG: bce:BC5195 transposase; manually curated; PFAM: transposase IS200-family protein YP_003672925.1 KEGG: gyc:GYMC61_3520 cytochrome aa3 quinol oxidase subunit IV; TIGRFAM: cytochrome aa3 quinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_003672926.1 KEGG: gyc:GYMC61_3521 cytochrome aa3 quinol oxidase subunit III; TIGRFAM: cytochrome aa3 quinol oxidase subunit III; PFAM: cytochrome C oxidase subunit III YP_003672927.1 KEGG: gyc:GYMC61_3522 cytochrome aa3 quinol oxidase subunit I; TIGRFAM: cytochrome aa3 quinol oxidase subunit I; cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_003672928.1 KEGG: gyc:GYMC61_3523 quinol oxidase AA3, subunit II; TIGRFAM: quinol oxidase AA3, subunit II; PFAM: cytochrome C oxidase subunit II YP_003672929.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: gyc:GYMC61_3524 tRNA/rRNA methyltransferase (SpoU) YP_003672930.1 PFAM: amino acid permease-associated region; KEGG: gyc:GYMC61_3525 amino acid permease-associated region YP_003672931.1 KEGG: gka:GK3462 hypothetical protein YP_003672932.1 PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: gka:GK3463 Rieske [2Fe-2S] iron-sulfur protein YP_003672933.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: gyc:GYMC61_3528 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_003672934.1 TIGRFAM: glycerate kinase; KEGG: gyc:GYMC61_3529 glycerate kinase; PFAM: glycerate kinase YP_003672935.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gyc:GYMC61_3530 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003672936.1 PFAM: protein of unknown function DUF163; KEGG: gyc:GYMC61_3531 protein of unknown function DUF163 YP_003672937.1 manually curated; KEGG: gyc:GYMC61_3532 hypothetical protein YP_003672938.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: gyc:GYMC61_3533 HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein YP_003672939.1 KEGG: gyc:GYMC61_3534 beta-lactamase YP_003672940.1 PFAM: protein of unknown function YycH; KEGG: gyc:GYMC61_3535 protein of unknown function YycH YP_003672941.1 PFAM: YycH family protein; KEGG: gka:GK3472 hypothetical protein YP_003672942.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; KEGG: gka:GK3473 two-component sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003672943.1 KEGG: gka:GK3474 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; transcriptional regulator YP_003672944.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: gyc:GYMC61_3539 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_003672945.1 KEGG: gyc:GYMC61_3540 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase YP_003672946.1 KEGG: gyc:GYMC61_3541 ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9-like YP_003672947.1 KEGG: gyc:GYMC61_3542 diguanylate cyclase and phosphoesterase; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: GGDEF domain containing protein YP_003672948.1 PFAM: protein of unknown function DUF2232, membrane; KEGG: gka:GK3479 hypothetical protein YP_003672949.1 KEGG: gyc:GYMC61_3544 ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_003672950.1 KEGG: gyc:GYMC61_3545 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003672951.1 KEGG: gyc:GYMC61_3546 ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6, bacterial-like YP_003672952.1 KEGG: gyc:GYMC61_3547 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_003672953.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gyc:GYMC61_3548 molybdopterin oxidoreductase YP_003672954.1 PFAM: protein of unknown function DUF951; KEGG: gyc:GYMC61_3549 protein of unknown function DUF951 YP_003672955.1 PFAM: MscS Mechanosensitive ion channel; KEGG: gka:GK3486 hypothetical protein YP_003672956.1 KEGG: gyc:GYMC61_3551 sporulation protein YyaC; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256 YP_003672957.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: gyc:GYMC61_3552 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003672958.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: gyc:GYMC61_3553 cobyrinic acid ac-diamide synthase YP_003672959.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: gyc:GYMC61_3554 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003672960.1 KEGG: gyc:GYMC61_3555 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_003672961.1 KEGG: gka:GK3493 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_003672962.1 KEGG: gyc:GYMC61_3557 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_003672963.1 KEGG: gyc:GYMC61_3559 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein YP_003672964.1 KEGG: gyc:GYMC61_3560 membrane protein insertase, YidC/Oxa1 family; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: hypothetical protein YP_003672965.1 KEGG: gyc:GYMC61_3561 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_003672966.1 KEGG: gyc:GYMC61_3562 ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34