-- dump date 20120504_145554 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 557723000001 SEQ_END SEQ_END NC_011852.1 2269156 2269156 DR NC_011852.1; contig end 2269156..2269156 Haemophilus parasuis SH0165 YP_002474655.1 CDS gapA NC_011852.1 2 1021 D COG:G;COG0057; glyceraldehyde-3-phosphate dehydrogenase 2..1021 Haemophilus parasuis SH0165 7278596 YP_002474656.1 CDS gyrA NC_011852.1 1967 4633 D COG:L;COG0188; DNA gyrase subunit A 1967..4633 Haemophilus parasuis SH0165 7278617 YP_002474657.1 CDS HAPS_0004 NC_011852.1 8972 9094 R hypothetical protein complement(8972..9094) Haemophilus parasuis SH0165 7278619 YP_002474658.1 CDS frdA NC_011852.1 9632 11416 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 9632..11416 Haemophilus parasuis SH0165 7278620 YP_002474659.1 CDS frdB NC_011852.1 11423 12193 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 11423..12193 Haemophilus parasuis SH0165 7278621 YP_002474660.1 CDS frdC NC_011852.1 12206 12598 D COG:C;COG3029; fumarate reductase (anaerobic), membrane anchor subunit C 12206..12598 Haemophilus parasuis SH0165 7278622 YP_002474661.1 CDS frdD NC_011852.1 12609 12953 D in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 12609..12953 Haemophilus parasuis SH0165 7278623 YP_002474662.1 CDS cysZ NC_011852.1 13272 14027 R putative role in sulfur assimilation; putative sulfate transport protein CysZ complement(13272..14027) Haemophilus parasuis SH0165 7278624 YP_002474663.1 CDS zipA NC_011852.1 14136 14954 D interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 14136..14954 Haemophilus parasuis SH0165 7278625 YP_002474664.1 CDS ligA NC_011852.1 15018 17045 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 15018..17045 Haemophilus parasuis SH0165 7278626 YP_002474665.1 CDS recQ NC_011852.1 17103 18932 R COG:L;COG0514; ATP-dependent DNA helicase RecQ, superfamily II complement(17103..18932) Haemophilus parasuis SH0165 7278627 YP_002474666.1 CDS cyaY NC_011852.1 18932 19240 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(18932..19240) Haemophilus parasuis SH0165 7278628 YP_002474667.1 CDS lexA NC_011852.1 19323 19952 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(19323..19952) Haemophilus parasuis SH0165 7278629 YP_002474668.1 CDS pykF NC_011852.1 20146 21147 R pyruvate kinase/FOG: TPR repeat, Sel1 subfamily complement(20146..21147) Haemophilus parasuis SH0165 7278630 YP_002474669.1 CDS HAPS_0016 NC_011852.1 21151 21735 R hypothetical protein complement(21151..21735) Haemophilus parasuis SH0165 7278631 YP_002474670.1 CDS HAPS_0017 NC_011852.1 21737 22492 R COG:R;COG0790; Sel1 domain protein, repeat-containing protein complement(21737..22492) Haemophilus parasuis SH0165 7278632 YP_002474671.1 CDS plsB NC_011852.1 22799 25234 D PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 22799..25234 Haemophilus parasuis SH0165 7278633 YP_002474672.1 CDS apt NC_011852.1 25428 25970 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 25428..25970 Haemophilus parasuis SH0165 7278634 YP_002474673.1 CDS dnaX NC_011852.1 26035 28047 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 26035..28047 Haemophilus parasuis SH0165 7278635 YP_002474674.1 CDS HAPS_0021 NC_011852.1 28053 28949 D COG:V;COG1131; multidrug ABC transporter ATPase 28053..28949 Haemophilus parasuis SH0165 7278636 YP_002474675.1 CDS HAPS_0022 NC_011852.1 28971 29726 D COG:V;COG0842; multidrug ABC transporter permease 28971..29726 Haemophilus parasuis SH0165 7278637 YP_002474676.1 CDS stbD NC_011852.1 29816 30097 D COG:D;COG2161; putative plasmid stability protein StbD, antitoxin of toxin-antitoxin stability system 29816..30097 Haemophilus parasuis SH0165 7278638 YP_002474677.1 CDS stbE NC_011852.1 30094 30378 D COG:JD;COG2026; putative plasmid stability protein StbE, addiction module antitoxin 30094..30378 Haemophilus parasuis SH0165 7278639 YP_002474678.1 CDS sbcB NC_011852.1 30765 32138 D COG:L;COG2925; exonuclease I 30765..32138 Haemophilus parasuis SH0165 7278640 YP_002474679.1 CDS HAPS_0026 NC_011852.1 32221 33180 D COG:S;COG1912; hypothetical protein 32221..33180 Haemophilus parasuis SH0165 7278641 YP_002474680.1 CDS trpH NC_011852.1 33329 34150 D COG:R;COG0613; metal-dependent phosphoesterase 33329..34150 Haemophilus parasuis SH0165 7278642 YP_002474681.1 CDS ilvH NC_011852.1 34257 34748 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(34257..34748) Haemophilus parasuis SH0165 7278643 YP_002474682.1 CDS ilvI NC_011852.1 34741 36438 R acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit complement(34741..36438) Haemophilus parasuis SH0165 7278644 YP_002474683.1 CDS leuB NC_011852.1 36776 37858 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 36776..37858 Haemophilus parasuis SH0165 7278645 YP_002474684.1 CDS acrB NC_011852.1 38174 41263 R COG:V;COG0841; acriflavine resistance protein, cation/multidrug efflux pump complement(38174..41263) Haemophilus parasuis SH0165 7278646 YP_002474685.1 CDS acrA NC_011852.1 41275 42480 R COG:M;COG0845; putative acridine efflux pump AcrA, RND efflux membrane-fusion protein complement(41275..42480) Haemophilus parasuis SH0165 7278647 YP_002474686.1 CDS acrR NC_011852.1 42503 43084 R COG:K;COG1309; transcriptional regulator acrR protein complement(42503..43084) Haemophilus parasuis SH0165 7278648 YP_002474687.1 CDS purH NC_011852.1 43443 45041 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 43443..45041 Haemophilus parasuis SH0165 7278649 YP_002474688.1 CDS metC NC_011852.1 45117 46307 R catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase complement(45117..46307) Haemophilus parasuis SH0165 7278650 YP_002474689.1 CDS ogt NC_011852.1 46304 46867 R COG:L;COG0350; methylated-DNA--protein-cysteine methyltransferase complement(46304..46867) Haemophilus parasuis SH0165 7278651 YP_002474690.1 CDS ompP1 NC_011852.1 47253 48542 R COG:I;COG2067; long-chain fatty acid transport protein P1/47 kDa outer membrane protein complement(47253..48542) Haemophilus parasuis SH0165 7277389 YP_002474691.1 CDS mutS NC_011852.1 48840 49115 D COG:S;COG3691; putative DNA mismatch repair protein 48840..49115 Haemophilus parasuis SH0165 7276844 YP_002474692.1 CDS HAPS_0039 NC_011852.1 49279 49749 D COG:S;COG4636; hypothetical protein 49279..49749 Haemophilus parasuis SH0165 7276845 YP_002474693.1 CDS neuA NC_011852.1 50051 50731 D COG:M;COG1083; CMP-N-acetylneuraminic acid synthetase 50051..50731 Haemophilus parasuis SH0165 7276846 YP_002474694.1 CDS lsgA NC_011852.1 50718 51914 D involved in the export of O-antigen and teichoic acid/lipopolysaccharide biosynthesis protein; COG:R;COG2244; putative lipooligosaccharide flippase 50718..51914 Haemophilus parasuis SH0165 7276847 YP_002474695.1 CDS lsgB NC_011852.1 51915 52883 D CMP-N-acetylneuraminate-beta-galactosamide- alpha-2, 3-sialyltransferase/lipopolysaccharide biosynthesis protein 51915..52883 Haemophilus parasuis SH0165 7276848 YP_002474696.1 CDS HAPS_0043 NC_011852.1 52895 53902 D hypothetical protein 52895..53902 Haemophilus parasuis SH0165 7276849 YP_002474697.1 CDS wcwK NC_011852.1 54105 55136 D glycosyltransferase/capsular polysaccharide phosphotransferase WcwK 54105..55136 Haemophilus parasuis SH0165 7276850 YP_002474698.1 CDS wcfQ NC_011852.1 55154 55972 D COG:M;COG0463; extracellular polysaccharide glycosyltransferase 55154..55972 Haemophilus parasuis SH0165 7276851 YP_002474699.1 CDS wbgX NC_011852.1 55980 57131 D involved in lipopolysaccharide biosynthesis, spore coat polysaccharide biosynthesis protein C/glycosyltransferase; COG:M;COG0399; DegT/DnrJ/EryC1/StrS aminotransferase 55980..57131 Haemophilus parasuis SH0165 7276852 YP_002474700.1 CDS wbgY NC_011852.1 57145 57738 D COG:M;COG2148; putative glycosyltransferase/lipopolysaccharide biosynthesis protein 57145..57738 Haemophilus parasuis SH0165 7276853 YP_002474701.1 CDS capD NC_011852.1 58104 60044 D COG:MG;COG1086; polysaccharide biosynthesis protein CapD 58104..60044 Haemophilus parasuis SH0165 7276854 YP_002474702.1 CDS wza NC_011852.1 60308 61462 D COG:M;COG1596; polysaccharide export protein, periplasmic protein involved in capsular polysaccharide export 60308..61462 Haemophilus parasuis SH0165 7276855 YP_002474703.1 CDS ptp NC_011852.1 61466 61909 D COG:T;COG0394; cytoplasmic tyrosine phosphatase 61466..61909 Haemophilus parasuis SH0165 7276856 YP_002474704.1 CDS wzs NC_011852.1 61928 64015 D COG:M;COG3206; tyrosine kinase, chain length regulator in capsular polysaccharide biosynthesis 61928..64015 Haemophilus parasuis SH0165 7276857 YP_002474705.1 CDS HAPS_0052 NC_011852.1 64250 64696 D COG:K;COG1959; BadM/Rrf2 family HTH-type transcriptional regulator 64250..64696 Haemophilus parasuis SH0165 7276858 YP_002474706.1 CDS iscS NC_011852.1 64728 65948 D catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 64728..65948 Haemophilus parasuis SH0165 7276859 YP_002474707.1 CDS iscU NC_011852.1 66114 66497 D COG:C;COG0822; scaffold protein, NifU-like protein involved in Fe-S cluster formation 66114..66497 Haemophilus parasuis SH0165 7276860 YP_002474708.1 CDS iscA NC_011852.1 66828 67151 D COG:S;COG0316; iron-binding protein, HesB family iron-sulfur (Fe-S) cluster formation protein 66828..67151 Haemophilus parasuis SH0165 7276861 YP_002474709.1 CDS hscB NC_011852.1 67161 67682 D J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 67161..67682 Haemophilus parasuis SH0165 7276862 YP_002474710.1 CDS HAPS_0057 NC_011852.1 67947 68918 D COG:L;COG3547; ISNme5, family IS110 67947..68918 Haemophilus parasuis SH0165 7276863 YP_002474711.1 CDS hisS NC_011852.1 68965 69600 D hypothetical protein 68965..69600 Haemophilus parasuis SH0165 7276864 YP_002474712.1 CDS hscA NC_011852.1 69775 71451 D COG:O;COG0443; chaperone protein HscA 69775..71451 Haemophilus parasuis SH0165 7276865 YP_002474713.1 CDS fdx NC_011852.1 71727 72068 D COG:C;COG0633; ferredoxin, 2Fe-2S type, ISC system 71727..72068 Haemophilus parasuis SH0165 7276866 YP_002474714.1 CDS iscX NC_011852.1 72068 72262 D COG:S;COG2975; FeS assembly protein IscX 72068..72262 Haemophilus parasuis SH0165 7276867 YP_002474715.1 CDS luxS NC_011852.1 73068 73577 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(73068..73577) Haemophilus parasuis SH0165 7276869 YP_002474716.1 CDS typA NC_011852.1 73841 75688 D COG:T;COG1217; GTP-binding protein/membrane GTPase involved in stress response 73841..75688 Haemophilus parasuis SH0165 7276870 YP_002474717.1 CDS grxA NC_011852.1 75737 76000 D functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 75737..76000 Haemophilus parasuis SH0165 7276871 YP_002474718.1 CDS HAPS_0066 NC_011852.1 76392 76736 R hypothetical protein complement(76392..76736) Haemophilus parasuis SH0165 7276872 YP_002474719.1 CDS cydA NC_011852.1 77166 78716 D COG:C;COG1271; cytochrome D ubiquinol oxidase subunit I 77166..78716 Haemophilus parasuis SH0165 7276873 YP_002474720.1 CDS cydB NC_011852.1 78730 79878 D COG:C;COG1294; cytochrome D ubiquinol oxidase subunit II 78730..79878 Haemophilus parasuis SH0165 7276874 YP_002474721.1 CDS HAPS_0069 NC_011852.1 79990 80280 D COG:S;COG3790; hypothetical protein 79990..80280 Haemophilus parasuis SH0165 7276875 YP_002474722.1 CDS ybgC NC_011852.1 80450 80848 D COG:R;COG0824; Pol-Pal system-associated acyl-CoA thioesterase 80450..80848 Haemophilus parasuis SH0165 7276876 YP_002474723.1 CDS tolQ NC_011852.1 80873 81553 D COG:U;COG0811; colicin transport protein/biopolymer transport protein, membrane spanning protein in TolA-TolQ-TolR complex 80873..81553 Haemophilus parasuis SH0165 7276877 YP_002474724.1 CDS tolR NC_011852.1 81619 82059 D membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 81619..82059 Haemophilus parasuis SH0165 7276878 YP_002474725.1 CDS tolA NC_011852.1 82076 83377 D involved in colicin uptake, membrane spanning protein in TolA-TolQ-TolR complex; cell envelope integrity inner membrane protein TolA 82076..83377 Haemophilus parasuis SH0165 7276879 YP_002474726.1 CDS tolB NC_011852.1 83508 84683 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 83508..84683 Haemophilus parasuis SH0165 7276880 YP_002474727.1 CDS palA NC_011852.1 84702 85163 D COG:M;COG2885; 18K peptidoglycan-associated outer membrane lipoprotein PalA 84702..85163 Haemophilus parasuis SH0165 7276881 YP_002474728.1 CDS djlA NC_011852.1 85309 86169 D functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 85309..86169 Haemophilus parasuis SH0165 7276882 YP_002474729.1 CDS yjdF NC_011852.1 86169 86792 D COG:S;COG3647; inner membrane protein 86169..86792 Haemophilus parasuis SH0165 7276883 YP_002474730.1 CDS dusC NC_011852.1 86841 87761 D COG:J;COG0042; tRNA-dihydrouridine synthase C 86841..87761 Haemophilus parasuis SH0165 7276884 YP_002474731.1 CDS HAPS_0079 NC_011852.1 87761 88807 D COG:S;COG3768; hypothetical protein 87761..88807 Haemophilus parasuis SH0165 7276885 YP_002474732.1 CDS truA NC_011852.1 89082 89870 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 89082..89870 Haemophilus parasuis SH0165 7276886 YP_002474733.1 CDS cafA NC_011852.1 89939 91414 D involved in the processing of the 5'end of 16S rRNA; ribonuclease G 89939..91414 Haemophilus parasuis SH0165 7276887 YP_002474734.1 CDS potD NC_011852.1 91573 92613 D COG:E;COG0687; spermidine/putrescine-binding periplasmic protein 1 91573..92613 Haemophilus parasuis SH0165 7276888 YP_002474735.1 CDS HAPS_0083 NC_011852.1 92751 93329 D COG:S;COG3117; hypothetical protein 92751..93329 Haemophilus parasuis SH0165 7276889 YP_002474736.1 CDS HAPS_0084 NC_011852.1 93355 93858 D COG:S;COG1934; hypothetical protein 93355..93858 Haemophilus parasuis SH0165 7276890 YP_002474737.1 CDS HAPS_0085 NC_011852.1 93868 94593 D COG:R;COG1137; ABC transporter ATPase 93868..94593 Haemophilus parasuis SH0165 7276891 YP_002474738.1 CDS ptsN NC_011852.1 94730 95176 D COG:GT;COG1762; PTS system, nitrogen regulatory IIA-like protein 94730..95176 Haemophilus parasuis SH0165 7276892 YP_002474739.1 CDS HAPS_0087 NC_011852.1 95182 96027 D COG:R;COG1660; putative P-loop-containing kinase 95182..96027 Haemophilus parasuis SH0165 7276893 YP_002474740.1 CDS visC NC_011852.1 96029 97210 D COG:HC;COG0654; FAD-dependent monooxygenase 96029..97210 Haemophilus parasuis SH0165 7276894 YP_002474741.1 CDS hlpB NC_011852.1 97233 97817 D lipoprotein HlpB, chromosome segregation ATPase 97233..97817 Haemophilus parasuis SH0165 7276895 YP_002474742.1 CDS cysS NC_011852.1 97902 99281 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 97902..99281 Haemophilus parasuis SH0165 7276896 YP_002474743.1 CDS hbpA NC_011852.1 100304 101899 R COG:E;COG0747; heme-binding protein A complement(100304..101899) Haemophilus parasuis SH0165 7276898 YP_002474744.1 CDS fhuF NC_011852.1 102486 103274 R ferric hydroximate transport ferric iron reductase complement(102486..103274) Haemophilus parasuis SH0165 7276900 YP_002474745.1 CDS glgP NC_011852.1 105099 107498 R COG:G;COG0058; glucan phosphorylase complement(105099..107498) Haemophilus parasuis SH0165 7276903 YP_002474746.1 CDS HAPS_0098 NC_011852.1 107658 107822 R hypothetical protein complement(107658..107822) Haemophilus parasuis SH0165 7276904 YP_002474747.1 CDS dsbB NC_011852.1 107831 108370 R COG:O;COG1495; disulfide bond formation protein B complement(107831..108370) Haemophilus parasuis SH0165 7276905 YP_002474748.1 CDS fadR NC_011852.1 110094 110816 D Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 110094..110816 Haemophilus parasuis SH0165 7276907 YP_002474749.1 CDS apbE NC_011852.1 111012 112064 D COG:H;COG1477; thiamine biosynthesis membrane-associated lipoprotein 111012..112064 Haemophilus parasuis SH0165 7276908 YP_002474750.1 CDS HAPS_0103 NC_011852.1 112076 112330 D COG:S;COG2991; hypothetical protein 112076..112330 Haemophilus parasuis SH0165 7276909 YP_002474751.1 CDS HAPS_0104 NC_011852.1 112355 112777 D nucleotidyltransferase substrate binding protein 112355..112777 Haemophilus parasuis SH0165 7276910 YP_002474752.1 CDS HAPS_0105 NC_011852.1 112756 113076 D DNA polymerase beta domain-containing protein region 112756..113076 Haemophilus parasuis SH0165 7276911 YP_002474753.1 CDS mnmA NC_011852.1 113076 114227 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 113076..114227 Haemophilus parasuis SH0165 7276912 YP_002474754.1 CDS dxs NC_011852.1 114423 116270 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(114423..116270) Haemophilus parasuis SH0165 7276913 YP_002474755.1 CDS suhB NC_011852.1 116323 117135 R COG:G;COG0483; inositol-1-monophosphatase complement(116323..117135) Haemophilus parasuis SH0165 7276914 YP_002474756.1 CDS HAPS_0109 NC_011852.1 117532 118503 D COG:L;COG3547; ISNme5, family IS110 117532..118503 Haemophilus parasuis SH0165 7276915 YP_002474757.1 CDS mraZ NC_011852.1 119050 119508 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 119050..119508 Haemophilus parasuis SH0165 7276916 YP_002474758.1 CDS mraW NC_011852.1 119527 120465 D COG:M;COG0275; S-adenosyl-methyltransferase MraW 119527..120465 Haemophilus parasuis SH0165 7276917 YP_002474759.1 CDS ftsL NC_011852.1 120465 120776 D COG:D;COG3116; cell division protein FtsL 120465..120776 Haemophilus parasuis SH0165 7276918 YP_002474760.1 CDS ftsI NC_011852.1 120779 122830 D COG:M;COG0768; cell division protein FtsI 120779..122830 Haemophilus parasuis SH0165 7276919 YP_002474761.1 CDS murE NC_011852.1 122840 124330 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 122840..124330 Haemophilus parasuis SH0165 7276920 YP_002474762.1 CDS murF NC_011852.1 124475 125869 D COG:M;COG0770; UDP-MurNAc-pentapeptide synthetase 124475..125869 Haemophilus parasuis SH0165 7276921 YP_002474763.1 CDS mraY NC_011852.1 125880 126962 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 125880..126962 Haemophilus parasuis SH0165 7276922 YP_002474764.1 CDS murD NC_011852.1 127085 128383 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 127085..128383 Haemophilus parasuis SH0165 7276923 YP_002474765.1 CDS ftsW NC_011852.1 128383 129561 D COG:D;COG0772; cell division membrane protein 128383..129561 Haemophilus parasuis SH0165 7276924 YP_002474766.1 CDS murG NC_011852.1 129576 130631 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 129576..130631 Haemophilus parasuis SH0165 7276762 YP_002474767.1 CDS murC NC_011852.1 130684 132111 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 130684..132111 Haemophilus parasuis SH0165 7276760 YP_002474768.1 CDS ddl NC_011852.1 132259 133170 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 132259..133170 Haemophilus parasuis SH0165 7277963 YP_002474769.1 CDS ftsQ NC_011852.1 133170 133949 D COG:M;COG1589; cell division septal protein FtsQ 133170..133949 Haemophilus parasuis SH0165 7277964 YP_002474770.1 CDS ftsA NC_011852.1 133976 135253 D COG:D;COG0849; cell division protein FtsA/actin-like ATPase involved in cell division 133976..135253 Haemophilus parasuis SH0165 7277965 YP_002474771.1 CDS ftsZ NC_011852.1 135296 136522 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 135296..136522 Haemophilus parasuis SH0165 7277966 YP_002474772.1 CDS lpxC NC_011852.1 136548 137468 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 136548..137468 Haemophilus parasuis SH0165 7277967 YP_002474773.1 CDS sstT NC_011852.1 137658 138872 D involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 137658..138872 Haemophilus parasuis SH0165 7277968 YP_002474774.1 CDS lepA NC_011852.1 139145 140944 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 139145..140944 Haemophilus parasuis SH0165 7277969 YP_002474775.1 CDS HAPS_0128 NC_011852.1 141203 142174 D COG:L;COG3547; ISNme5, family IS110 141203..142174 Haemophilus parasuis SH0165 7277970 YP_002474776.1 CDS lepB NC_011852.1 142250 143212 D COG:U;COG0681; signal peptidase I 142250..143212 Haemophilus parasuis SH0165 7277971 YP_002474777.1 CDS rnc NC_011852.1 143345 144016 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 143345..144016 Haemophilus parasuis SH0165 7277972 YP_002474778.1 CDS era NC_011852.1 144077 144979 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 144077..144979 Haemophilus parasuis SH0165 7277973 YP_002474779.1 CDS recO NC_011852.1 144979 145698 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 144979..145698 Haemophilus parasuis SH0165 7277974 YP_002474780.1 CDS HAPS_0133 NC_011852.1 145803 146330 R COG:L;COG1943; hypothetical protein complement(145803..146330) Haemophilus parasuis SH0165 7277975 YP_002474781.1 CDS metX NC_011852.1 146581 147654 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(146581..147654) Haemophilus parasuis SH0165 7277976 YP_002474782.1 CDS pyrH NC_011852.1 149526 150239 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 149526..150239 Haemophilus parasuis SH0165 7277978 YP_002474783.1 CDS gmhA NC_011852.1 150301 150879 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(150301..150879) Haemophilus parasuis SH0165 7277979 YP_002474784.1 CDS frr NC_011852.1 151009 151566 D COG:J;COG0233; ribosome recycling factor 151009..151566 Haemophilus parasuis SH0165 7277980 YP_002474785.1 CDS HAPS_0139 NC_011852.1 151710 152429 D hypothetical protein 151710..152429 Haemophilus parasuis SH0165 7277981 YP_002474786.1 CDS HAPS_0140 NC_011852.1 152562 153788 R COG:R;COG2252; putative xanthine/uracil permease complement(152562..153788) Haemophilus parasuis SH0165 7277982 YP_002474787.1 CDS perM NC_011852.1 154045 155085 R COG:R;COG0628; PerM protein permease complement(154045..155085) Haemophilus parasuis SH0165 7277983 YP_002474788.1 CDS usg NC_011852.1 155158 156147 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(155158..156147) Haemophilus parasuis SH0165 7277984 YP_002474789.1 CDS fxsA NC_011852.1 156290 156757 R COG:R;COG3030; FxsA protein affecting phage T7 exclusion by the F plasmid complement(156290..156757) Haemophilus parasuis SH0165 7277985 YP_002474790.1 CDS ilvG NC_011852.1 157300 158805 D COG:EH;COG0028; acetolactate synthase 2 large subunit, biosynthetic type 157300..158805 Haemophilus parasuis SH0165 7277986 YP_002474791.1 CDS ilvM NC_011852.1 158817 159035 D COG:S;COG3978; acetolactate synthase 2 regulatory subunit 158817..159035 Haemophilus parasuis SH0165 7277987 YP_002474792.1 CDS HAPS_0147 NC_011852.1 159611 159763 R hypothetical protein complement(159611..159763) Haemophilus parasuis SH0165 7277989 YP_002474793.1 CDS metG NC_011852.1 164136 166190 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 164136..166190 Haemophilus parasuis SH0165 7277991 YP_002474794.1 CDS ndk NC_011852.1 166246 166662 D COG:F;COG0105; nucleoside diphosphate kinase 166246..166662 Haemophilus parasuis SH0165 7277992 YP_002474795.1 CDS HAPS_0151 NC_011852.1 167525 167926 R hypothetical protein complement(167525..167926) Haemophilus parasuis SH0165 7277993 YP_002474796.1 CDS nudE NC_011852.1 167913 168461 R ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE complement(167913..168461) Haemophilus parasuis SH0165 7277994 YP_002474797.1 CDS HAPS_0153 NC_011852.1 168510 168986 R COG:S;COG1238; hypothetical protein complement(168510..168986) Haemophilus parasuis SH0165 7277995 YP_002474798.1 CDS focA NC_011852.1 169171 169995 D COG:P;COG2116; FNT family formate-nitrite transporter 169171..169995 Haemophilus parasuis SH0165 7277996 YP_002474799.1 CDS pflB NC_011852.1 170089 172413 D COG:C;COG1882; pyruvate-formate lyase 170089..172413 Haemophilus parasuis SH0165 7277997 YP_002474800.1 CDS pflA NC_011852.1 172555 173295 D COG:O;COG1180; pyruvate formate lyase-activating enzyme 1 172555..173295 Haemophilus parasuis SH0165 7277998 YP_002474801.1 CDS HAPS_0157 NC_011852.1 173488 174258 R hypothetical protein complement(173488..174258) Haemophilus parasuis SH0165 7277999 YP_002474802.1 CDS HAPS_0158 NC_011852.1 174471 176129 R COG:R;COG2985; hypothetical protein complement(174471..176129) Haemophilus parasuis SH0165 7278000 YP_002474803.1 CDS gltS NC_011852.1 176317 177321 D COG:E;COG0786; sodium/glutamate symport carrier protein 176317..177321 Haemophilus parasuis SH0165 7278001 YP_002474804.1 CDS bioD NC_011852.1 177458 178177 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(177458..178177) Haemophilus parasuis SH0165 7278002 YP_002474805.1 CDS HAPS_0161 NC_011852.1 178357 178749 R COG:S;COG3105; hypothetical protein complement(178357..178749) Haemophilus parasuis SH0165 7278003 YP_002474806.1 CDS rplM NC_011852.1 179043 179471 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 179043..179471 Haemophilus parasuis SH0165 7278004 YP_002474807.1 CDS rpsI NC_011852.1 179487 179882 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 179487..179882 Haemophilus parasuis SH0165 7278005 YP_002474808.1 CDS ompP2 NC_011852.1 180997 182088 D COG:M;COG3203; outer membrane protein P2 (OMP P2) 180997..182088 Haemophilus parasuis SH0165 7278006 YP_002474809.1 CDS yfiF NC_011852.1 182164 182892 R COG:J;COG0565; tRNA/rRNA methyltransferase complement(182164..182892) Haemophilus parasuis SH0165 7278007 YP_002474810.1 CDS afuA NC_011852.1 183018 184058 D COG:P;COG1840; iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein 183018..184058 Haemophilus parasuis SH0165 7278008 YP_002474811.1 CDS hlyX NC_011852.1 184225 184995 R Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator complement(184225..184995) Haemophilus parasuis SH0165 7278009 YP_002474812.1 CDS HAPS_0168 NC_011852.1 185084 185191 D hypothetical protein 185084..185191 Haemophilus parasuis SH0165 7278010 YP_002474813.1 CDS yecO NC_011852.1 185360 185998 D COG:QR;COG0500; S-adenosyl-L-methionine-dependent methyltransferase 185360..185998 Haemophilus parasuis SH0165 7278011 YP_002474814.1 CDS dnaB NC_011852.1 186133 187581 D COG:L;COG0305; replicative DNA helicase 186133..187581 Haemophilus parasuis SH0165 7278012 YP_002474815.1 CDS HAPS_0171 NC_011852.1 187583 187861 D COG:S;COG3100; hypothetical protein 187583..187861 Haemophilus parasuis SH0165 7278013 YP_002474816.1 CDS nrdR NC_011852.1 187861 188310 D COG:K;COG1327; transcriptional repressor NrdR, consists of a Zn-ribbon and ATP-cone domains 187861..188310 Haemophilus parasuis SH0165 7278014 YP_002474817.1 CDS HAPS_0173 NC_011852.1 188318 189331 R COG:E;COG1509; lysine 2,3-aminomutase YodO family protein complement(188318..189331) Haemophilus parasuis SH0165 7278015 YP_002474818.1 CDS HAPS_0174 NC_011852.1 189355 189888 R hypothetical protein complement(189355..189888) Haemophilus parasuis SH0165 7278016 YP_002474819.1 CDS efp NC_011852.1 190052 190618 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 190052..190618 Haemophilus parasuis SH0165 7278017 YP_002474820.1 CDS zapB NC_011852.1 190642 190821 R putative cell division protein zapB complement(190642..190821) Haemophilus parasuis SH0165 7278018 YP_002474821.1 CDS HAPS_0177 NC_011852.1 191147 191365 D COG:S;COG3074; hypothetical protein 191147..191365 Haemophilus parasuis SH0165 7278019 YP_002474822.1 CDS tdk NC_011852.1 191516 192004 D COG:F;COG1435; thymidine kinase 191516..192004 Haemophilus parasuis SH0165 7278020 YP_002474823.1 CDS yniC NC_011852.1 192138 192785 D COG:R;COG0637; 2-deoxyglucose-6-phosphatase 192138..192785 Haemophilus parasuis SH0165 7278021 YP_002474824.1 CDS polA NC_011852.1 192932 195796 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 192932..195796 Haemophilus parasuis SH0165 7278022 YP_002474825.1 CDS yccA NC_011852.1 195864 196526 R COG:R;COG0670; integral membrane protein, transport protein complement(195864..196526) Haemophilus parasuis SH0165 7278023 YP_002474826.1 CDS clpB NC_011852.1 196644 199217 R COG:O;COG0542; ATP-dependent Clp protease subunit B complement(196644..199217) Haemophilus parasuis SH0165 7278024 YP_002474827.1 CDS dsbC NC_011852.1 199520 200203 R COG:O;COG1651; thiol:disulfide interchange protein DsbC complement(199520..200203) Haemophilus parasuis SH0165 7278025 YP_002474828.1 CDS HAPS_0184 NC_011852.1 200215 201708 R COG:M;COG0739; metalloprotease complement(200215..201708) Haemophilus parasuis SH0165 7278026 YP_002474829.1 CDS znuC NC_011852.1 201984 202700 D COG:P;COG1121; high-affinity zinc uptake system ATP-binding protein ZnuC 201984..202700 Haemophilus parasuis SH0165 7278027 YP_002474830.1 CDS znuB NC_011852.1 202711 203496 D COG:P;COG1108; high-affinity zinc uptake system membrane protein 202711..203496 Haemophilus parasuis SH0165 7278028 YP_002474831.1 CDS glmS NC_011852.1 203620 204417 D COG:R;COG0121; putative glutamine amidotransferase class-II 203620..204417 Haemophilus parasuis SH0165 7278029 YP_002474832.1 CDS lacD NC_011852.1 204462 205403 R catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase complement(204462..205403) Haemophilus parasuis SH0165 7278030 YP_002474833.1 CDS ptsEIIA NC_011852.1 205414 205800 R COG:G;COG2893; PTS system transporter subunit IIA complement(205414..205800) Haemophilus parasuis SH0165 7278031 YP_002474834.1 CDS bgaC NC_011852.1 205961 207751 R COG:G;COG1874; beta-galactosidase complement(205961..207751) Haemophilus parasuis SH0165 7278032 YP_002474835.1 CDS ptsEIID NC_011852.1 207930 208766 R COG:G;COG3716; PTS system, IIDcomponent complement(207930..208766) Haemophilus parasuis SH0165 7278033 YP_002474836.1 CDS ptsEIIC NC_011852.1 208753 209628 R COG:G;COG3715; PTS system transporter subunit IIC complement(208753..209628) Haemophilus parasuis SH0165 7278034 YP_002474837.1 CDS ptsEIIB NC_011852.1 209642 210115 R COG:G;COG3444; PTS system transporter subunit IIB complement(209642..210115) Haemophilus parasuis SH0165 7278035 YP_002474838.1 CDS agaS NC_011852.1 210132 211262 R COG:M;COG2222; tagatose-6-phosphate ketose/aldose isomerase complement(210132..211262) Haemophilus parasuis SH0165 7278036 YP_002474839.1 CDS agaR NC_011852.1 211314 212075 R COG:KG;COG1349; transcriptional repressor AgaR/DNA-binding transcriptional dual regulator complement(211314..212075) Haemophilus parasuis SH0165 7278037 YP_002474840.1 CDS rdgC NC_011852.1 212416 213333 D Required for efficient pilin antigenic variation; recombination associated protein 212416..213333 Haemophilus parasuis SH0165 7278038 YP_002474841.1 CDS afuB NC_011852.1 213587 215650 D COG:P;COG1178; Fe3+ ABC transporter permease 213587..215650 Haemophilus parasuis SH0165 7278039 YP_002474842.1 CDS fbpC NC_011852.1 215634 216689 D Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import; ferric transporter ATP-binding subunit 215634..216689 Haemophilus parasuis SH0165 7278040 YP_002474843.1 CDS HAPS_0200 NC_011852.1 217115 217522 D COG:S;COG0779; hypothetical protein 217115..217522 Haemophilus parasuis SH0165 7278042 YP_002474844.1 CDS nusA NC_011852.1 217537 219069 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 217537..219069 Haemophilus parasuis SH0165 7278043 YP_002474845.1 CDS infB NC_011852.1 219087 221648 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 219087..221648 Haemophilus parasuis SH0165 7276676 YP_002474846.1 CDS HAPS_0203 NC_011852.1 221788 222048 D hypothetical protein 221788..222048 Haemophilus parasuis SH0165 7277390 YP_002474847.1 CDS HAPS_0204 NC_011852.1 222041 222418 D putative phage associated protein 222041..222418 Haemophilus parasuis SH0165 7277391 YP_002474848.1 CDS HAPS_0207 NC_011852.1 227629 228519 R COG:K;COG0583; putative HTH-type transcriptional regulator complement(227629..228519) Haemophilus parasuis SH0165 7277394 YP_002474849.1 CDS topA NC_011852.1 228657 231269 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 228657..231269 Haemophilus parasuis SH0165 7277395 YP_002474850.1 CDS HAPS_0209 NC_011852.1 231316 233052 R COG:R;COG3083; putative sulfatase complement(231316..233052) Haemophilus parasuis SH0165 7277396 YP_002474851.1 CDS HAPS_0210 NC_011852.1 233054 233278 R COG:S;COG3082; hypothetical protein complement(233054..233278) Haemophilus parasuis SH0165 7277397 YP_002474852.1 CDS kdkA NC_011852.1 233482 234183 R catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase complement(233482..234183) Haemophilus parasuis SH0165 7277398 YP_002474853.1 CDS thiI NC_011852.1 235105 236556 D Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 235105..236556 Haemophilus parasuis SH0165 7277400 YP_002474854.1 CDS glmU NC_011852.1 236579 237940 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 236579..237940 Haemophilus parasuis SH0165 7277401 YP_002474855.1 CDS rseB NC_011852.1 238232 239197 D COG:T;COG3026; periplasmic negative regulator of sigmaE 238232..239197 Haemophilus parasuis SH0165 7277402 YP_002474856.1 CDS rseC NC_011852.1 239194 239622 D COG:T;COG3086; sigma-E factor regulatory protein 239194..239622 Haemophilus parasuis SH0165 7277403 YP_002474857.1 CDS lcfA NC_011852.1 239633 241333 D Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 239633..241333 Haemophilus parasuis SH0165 7277404 YP_002474858.1 CDS HAPS_0218 NC_011852.1 241442 242596 D COG:D;COG4942; membrane-bound metallopeptidase 241442..242596 Haemophilus parasuis SH0165 7277405 YP_002474859.1 CDS HAPS_0219 NC_011852.1 242598 243443 D COG:S;COG2861; hypothetical protein 242598..243443 Haemophilus parasuis SH0165 7277406 YP_002474860.1 CDS ompD15 NC_011852.1 243473 245206 D COG:M;COG0729; surface antigen (D15), outer membrane protein 243473..245206 Haemophilus parasuis SH0165 7277407 YP_002474861.1 CDS HAPS_0221 NC_011852.1 245219 249124 D COG:S;COG2911; putative tubulin binding protein 245219..249124 Haemophilus parasuis SH0165 7277408 YP_002474862.1 CDS abiQ NC_011852.1 249362 249898 D AbiQ-like protein/lactococcal phage abortive infection protein 249362..249898 Haemophilus parasuis SH0165 7277409 YP_002474863.1 CDS cydD NC_011852.1 249943 251685 D involved in cytochrome bd biosynthesis, CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydD; in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 249943..251685 Haemophilus parasuis SH0165 7277410 YP_002474864.1 CDS cydC NC_011852.1 251689 253353 D involved in cytochrome bd biosynthesis, cysteine exporter (CydDC-E) family permease/ATP-binding protein CydC; in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 251689..253353 Haemophilus parasuis SH0165 7277411 YP_002474865.1 CDS mutT NC_011852.1 253476 253892 R COG:LR;COG0494; mutator mutT protein, NTP pyrophosphohydrolase including oxidative damage repair enzymes complement(253476..253892) Haemophilus parasuis SH0165 7277412 YP_002474866.1 CDS secA NC_011852.1 253961 256645 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(253961..256645) Haemophilus parasuis SH0165 7277413 YP_002474867.1 CDS HAPS_0227 NC_011852.1 256733 257053 R hypothetical protein complement(256733..257053) Haemophilus parasuis SH0165 7277414 YP_002474868.1 CDS HAPS_0228 NC_011852.1 257159 257467 D COG:S;COG4701; hypothetical protein 257159..257467 Haemophilus parasuis SH0165 7277415 YP_002474869.1 CDS nlpE NC_011852.1 257485 257850 D COG:MP;COG3015; lipoprotein copper homeostasis and adhesion, NlpE 257485..257850 Haemophilus parasuis SH0165 7277416 YP_002474870.1 CDS folK NC_011852.1 257942 258418 R COG:H;COG0801; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(257942..258418) Haemophilus parasuis SH0165 7277417 YP_002474871.1 CDS pcnB NC_011852.1 258418 259851 R COG:J;COG0617; polyA polymerase complement(258418..259851) Haemophilus parasuis SH0165 7277418 YP_002474872.1 CDS dksA NC_011852.1 260042 260488 R COG:T;COG1734; dosage-dependent DnaK suppressor protein complement(260042..260488) Haemophilus parasuis SH0165 7277419 YP_002474873.1 CDS malQ NC_011852.1 260708 262729 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(260708..262729) Haemophilus parasuis SH0165 7277420 YP_002474874.1 CDS malG NC_011852.1 262839 263729 R with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease complement(262839..263729) Haemophilus parasuis SH0165 7277421 YP_002474875.1 CDS malF NC_011852.1 263740 265296 R with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein complement(263740..265296) Haemophilus parasuis SH0165 7277422 YP_002474876.1 CDS malE NC_011852.1 265545 266801 R functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter periplasmic protein complement(265545..266801) Haemophilus parasuis SH0165 7277423 YP_002474877.1 CDS malK NC_011852.1 267061 268200 D with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein 267061..268200 Haemophilus parasuis SH0165 7277424 YP_002474878.1 CDS hemN NC_011852.1 268404 269555 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 268404..269555 Haemophilus parasuis SH0165 7277425 YP_002474879.1 CDS HAPS_0240 NC_011852.1 269961 270884 R hypothetical bacteriophage protein complement(269961..270884) Haemophilus parasuis SH0165 7277427 YP_002474880.1 CDS HAPS_0243 NC_011852.1 271921 272088 R hypothetical protein complement(271921..272088) Haemophilus parasuis SH0165 7277430 YP_002474881.1 CDS HAPS_0244 NC_011852.1 272745 273386 D hypothetical protein 272745..273386 Haemophilus parasuis SH0165 7277431 YP_002474882.1 CDS HAPS_0245 NC_011852.1 273397 273618 D hypothetical protein 273397..273618 Haemophilus parasuis SH0165 7277432 YP_002474883.1 CDS HAPS_0246 NC_011852.1 273683 274651 D hypothetical protein 273683..274651 Haemophilus parasuis SH0165 7277433 YP_002474884.1 CDS HAPS_0247 NC_011852.1 274744 275097 D bacteriophage Mu GP27-like protein 274744..275097 Haemophilus parasuis SH0165 7277434 YP_002474885.1 CDS HAPS_0248 NC_011852.1 275191 275655 R hypothetical protein complement(275191..275655) Haemophilus parasuis SH0165 7277435 YP_002474886.1 CDS HAPS_0249 NC_011852.1 275756 275887 D hypothetical protein 275756..275887 Haemophilus parasuis SH0165 7277436 YP_002474887.1 CDS lolA NC_011852.1 275949 276578 D participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 275949..276578 Haemophilus parasuis SH0165 7277437 YP_002474888.1 CDS trpR NC_011852.1 276649 276960 D When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 276649..276960 Haemophilus parasuis SH0165 7277438 YP_002474889.1 CDS mtgA NC_011852.1 276944 277714 D COG:M;COG0744; monofunctional biosynthetic peptidoglycan transglycosylase 276944..277714 Haemophilus parasuis SH0165 7277439 YP_002474890.1 CDS HAPS_0253 NC_011852.1 277737 278474 R COG:P;COG0600; nitrate/sulfonate/bicarbonate ABC transporter permease complement(277737..278474) Haemophilus parasuis SH0165 7277440 YP_002474891.1 CDS HAPS_0254 NC_011852.1 278477 279643 R COG:P;COG0715; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(278477..279643) Haemophilus parasuis SH0165 7277441 YP_002474892.1 CDS HAPS_0255 NC_011852.1 279652 280428 R COG:P;COG1116; nitrate/sulfonate/bicarbonate ABC transporter ATPase complement(279652..280428) Haemophilus parasuis SH0165 7277442 YP_002474893.1 CDS HAPS_0256 NC_011852.1 280628 281695 D COG:I;COG1960; acyl-CoA dehydrogenase 280628..281695 Haemophilus parasuis SH0165 7277443 YP_002474894.1 CDS mip NC_011852.1 281742 282284 D COG:S;COG2128; putative macrophage infectivity potentiator-like protein, peroxidase/antioxidase 281742..282284 Haemophilus parasuis SH0165 7277444 YP_002474895.1 CDS rimK NC_011852.1 282305 283189 D COG:HJ;COG0189; ribosomal protein S6 modification protein, glutamic acid ligase 282305..283189 Haemophilus parasuis SH0165 7277445 YP_002474896.1 CDS mukF NC_011852.1 283315 284646 D acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 283315..284646 Haemophilus parasuis SH0165 7277446 YP_002474897.1 CDS mukE NC_011852.1 284693 285403 D acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 284693..285403 Haemophilus parasuis SH0165 7277447 YP_002474898.1 CDS hpaIIM NC_011852.1 285423 286475 D COG:L;COG0270; Type II modification methyltransferase HpaII/DNA (cytosine-5-)-methyltransferase 285423..286475 Haemophilus parasuis SH0165 7277448 YP_002474899.1 CDS HAPS_0262 NC_011852.1 286483 287082 D hypothetical protein 286483..287082 Haemophilus parasuis SH0165 7277449 YP_002474900.1 CDS mukB NC_011852.1 287098 291588 D SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 287098..291588 Haemophilus parasuis SH0165 7277450 YP_002474901.1 CDS cca NC_011852.1 291647 292918 R catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase complement(291647..292918) Haemophilus parasuis SH0165 7277451 YP_002474902.1 CDS frxA NC_011852.1 292967 293635 R COG:C;COG0778; NAD(P)H-flavin oxidoreductase complement(292967..293635) Haemophilus parasuis SH0165 7277452 YP_002474903.1 CDS dusA NC_011852.1 293713 294006 D COG:S;COG3691; tRNA-dihydrouridine synthase A 293713..294006 Haemophilus parasuis SH0165 7277453 YP_002474904.1 CDS HAPS_0267 NC_011852.1 295171 295335 D hypothetical protein 295171..295335 Haemophilus parasuis SH0165 7277456 YP_002474905.1 CDS cdtC NC_011852.1 295319 295849 R cytolethal distending toxin protein C complement(295319..295849) Haemophilus parasuis SH0165 7277455 YP_002474906.1 CDS cdtB NC_011852.1 295860 296693 R cytolethal distending toxin protein B complement(295860..296693) Haemophilus parasuis SH0165 7277457 YP_002474907.1 CDS cdtA NC_011852.1 296702 297382 R cytolethal distending toxin protein A complement(296702..297382) Haemophilus parasuis SH0165 7277458 YP_002474908.1 CDS glnS NC_011852.1 297490 299172 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(297490..299172) Haemophilus parasuis SH0165 7277459 YP_002474909.1 CDS glpX NC_011852.1 299369 300367 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 299369..300367 Haemophilus parasuis SH0165 7277460 YP_002474910.1 CDS recJ NC_011852.1 300525 302147 D COG:L;COG0608; single-stranded-DNA-specific exonuclease RecJ 300525..302147 Haemophilus parasuis SH0165 7277461 YP_002474911.1 CDS plpD NC_011852.1 302276 303121 D COG:M;COG2885; lipoprotein Plp4/outer membrane protein and related peptidoglycan-associated (lipo)proteins 302276..303121 Haemophilus parasuis SH0165 7277462 YP_002474912.1 CDS HAPS_0276 NC_011852.1 303211 304029 D COG:R;COG0561; cof protein, hydrolases of the HAD superfamily protein 303211..304029 Haemophilus parasuis SH0165 7277463 YP_002474913.1 CDS HAPS_0277 NC_011852.1 304042 304560 D COG:M;COG1247; sortase 304042..304560 Haemophilus parasuis SH0165 7277464 YP_002474914.1 CDS dapA NC_011852.1 304672 305559 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 304672..305559 Haemophilus parasuis SH0165 7277465 YP_002474915.1 CDS lysS NC_011852.1 305727 307178 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 305727..307178 Haemophilus parasuis SH0165 7277466 YP_002474916.1 CDS HAPS_0280 NC_011852.1 307438 308211 D COG:S;COG3022; hypothetical protein 307438..308211 Haemophilus parasuis SH0165 7277467 YP_002474917.1 CDS rpsB NC_011852.1 308523 309248 D COG:J;COG0052; 30S ribosomal protein S2 308523..309248 Haemophilus parasuis SH0165 7277468 YP_002474918.1 CDS tsf NC_011852.1 309343 310194 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 309343..310194 Haemophilus parasuis SH0165 7277469 YP_002474919.1 CDS fdhD NC_011852.1 310251 310967 R COG:C;COG1526; formate dehydrogenase accessory protein complement(310251..310967) Haemophilus parasuis SH0165 7277470 YP_002474920.1 CDS fdxG_2 NC_011852.1 311614 312201 D COG:C;COG0243; transcriptional formate dehydrogenase alpha major subunit/formate dehydrogenase, nitrate-inducible, major subunit 311614..312201 Haemophilus parasuis SH0165 7278534 YP_002474921.1 CDS fdxG_1 NC_011852.1 312250 314682 D COG:C;COG0243; transcriptional formate dehydrogenase alpha major subunit/formate dehydrogenase, nitrate-inducible, major subunit 312250..314682 Haemophilus parasuis SH0165 7277267 YP_002474922.1 CDS fdxH NC_011852.1 314684 315610 D COG:C;COG0437; formate dehydrogenase iron-sulfur subunit subunit beta/Fe-S-cluster-containing hydrogenase components 1 314684..315610 Haemophilus parasuis SH0165 7277268 YP_002474923.1 CDS fdxI NC_011852.1 315603 316271 D COG:C;COG2864; formate dehydrogenase cytochrome B556 subunit subunit gamma 315603..316271 Haemophilus parasuis SH0165 7277269 YP_002474924.1 CDS HAPS_0289 NC_011852.1 317398 317586 D hypothetical protein 317398..317586 Haemophilus parasuis SH0165 7277271 YP_002474925.1 CDS glgB NC_011852.1 317851 320163 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 317851..320163 Haemophilus parasuis SH0165 7277272 YP_002474926.1 CDS glgX NC_011852.1 320433 322418 D COG:G;COG1523; glycogen operon protein GlgX 320433..322418 Haemophilus parasuis SH0165 7277273 YP_002474927.1 CDS glgC NC_011852.1 322449 323738 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 322449..323738 Haemophilus parasuis SH0165 7277274 YP_002474928.1 CDS glgA NC_011852.1 323878 325311 D catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 323878..325311 Haemophilus parasuis SH0165 7277275 YP_002474929.1 CDS guaB NC_011852.1 325463 326926 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 325463..326926 Haemophilus parasuis SH0165 7277276 YP_002474930.1 CDS HAPS_0295 NC_011852.1 327191 327694 D COG:M;COG3955; exopolysaccharide biosynthesis protein 327191..327694 Haemophilus parasuis SH0165 7277277 YP_002474931.1 CDS HAPS_0296 NC_011852.1 327710 328390 D putative DNA repair ATPase 327710..328390 Haemophilus parasuis SH0165 7277278 YP_002474932.1 CDS guaA NC_011852.1 328462 330033 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 328462..330033 Haemophilus parasuis SH0165 7277279 YP_002474933.1 CDS HAPS_0300 NC_011852.1 331234 331452 R hypothetical protein complement(331234..331452) Haemophilus parasuis SH0165 7277282 YP_002474934.1 CDS HAPS_0301 NC_011852.1 331901 332158 R COG:R;COG0727; hypothetical protein complement(331901..332158) Haemophilus parasuis SH0165 7277283 YP_002474935.1 CDS HAPS_0302 NC_011852.1 332155 333801 R DNA repair ATPase complement(332155..333801) Haemophilus parasuis SH0165 7277284 YP_002474936.1 CDS dmcA NC_011852.1 333848 334924 R methyl-accepting chemotaxis protein complement(333848..334924) Haemophilus parasuis SH0165 7277285 YP_002474937.1 CDS HAPS_0304 NC_011852.1 334940 335326 R hypothetical protein complement(334940..335326) Haemophilus parasuis SH0165 7277286 YP_002474938.1 CDS HAPS_0305 NC_011852.1 335353 336066 R COG:S;COG4735; hypothetical protein complement(335353..336066) Haemophilus parasuis SH0165 7277287 YP_002474939.1 CDS HAPS_0306 NC_011852.1 336277 336567 R hypothetical protein complement(336277..336567) Haemophilus parasuis SH0165 7277288 YP_002474940.1 CDS HAPS_0307 NC_011852.1 336629 336967 R hypothetical protein complement(336629..336967) Haemophilus parasuis SH0165 7277289 YP_002474941.1 CDS HAPS_0308 NC_011852.1 336976 337863 R COG:K;COG2378; transcriptional regulator-like protein, helix-turn-helix domain-containing protein complement(336976..337863) Haemophilus parasuis SH0165 7277290 YP_002474942.1 CDS HAPS_0309 NC_011852.1 338081 338425 D COG:K;COG1396; XRE family transcriptional regulator 338081..338425 Haemophilus parasuis SH0165 7277291 YP_002474943.1 CDS xthA NC_011852.1 338466 339269 R removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III complement(338466..339269) Haemophilus parasuis SH0165 7277292 YP_002474944.1 CDS yojA NC_011852.1 339385 340761 R COG:R;COG2056; GntP family gluconate/proton (H+) symporter complement(339385..340761) Haemophilus parasuis SH0165 7277293 YP_002474945.1 CDS mesJ NC_011852.1 341069 341956 R COG:D;COG0037; putative ATPase complement(341069..341956) Haemophilus parasuis SH0165 7277294 YP_002474946.1 CDS HAPS_0314 NC_011852.1 342082 342216 R hypothetical protein complement(342082..342216) Haemophilus parasuis SH0165 7277295 YP_002474947.1 CDS ubiX NC_011852.1 342200 342766 D COG:H;COG0163; aromatic acid decarboxylase 342200..342766 Haemophilus parasuis SH0165 7277297 YP_002474948.1 CDS HAPS_0316 NC_011852.1 342801 342914 R hypothetical protein complement(342801..342914) Haemophilus parasuis SH0165 7277296 YP_002474949.1 CDS HAPS_0315 NC_011852.1 342899 343204 D COG:S;COG3787; hypothetical protein 342899..343204 Haemophilus parasuis SH0165 7277299 YP_002474950.1 CDS glnE NC_011852.1 343366 346224 D catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 343366..346224 Haemophilus parasuis SH0165 7277298 YP_002474951.1 CDS queF NC_011852.1 346241 347080 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 346241..347080 Haemophilus parasuis SH0165 7277300 YP_002474952.1 CDS lrp NC_011852.1 347193 347675 D mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 347193..347675 Haemophilus parasuis SH0165 7277301 YP_002474953.1 CDS ftsK NC_011852.1 347685 350288 D COG:D;COG1674; DNA translocase FtsK involved in cell division, DNA segregation ATPase FtsK 347685..350288 Haemophilus parasuis SH0165 7277302 YP_002474954.1 CDS aroG NC_011852.1 350372 351463 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 350372..351463 Haemophilus parasuis SH0165 7277303 YP_002474955.1 CDS HAPS_0322 NC_011852.1 351472 352218 D COG:O;COG1214; putative M22-like peptidase 351472..352218 Haemophilus parasuis SH0165 7277304 YP_002474956.1 CDS HAPS_0323 NC_011852.1 352226 352954 D hypothetical protein 352226..352954 Haemophilus parasuis SH0165 7277305 YP_002474957.1 CDS cdtC NC_011852.1 353207 353737 R cytolethal distending toxin protein C complement(353207..353737) Haemophilus parasuis SH0165 7277306 YP_002474958.1 CDS cdtB NC_011852.1 353748 354581 R cytolethal distending toxin protein B complement(353748..354581) Haemophilus parasuis SH0165 7277307 YP_002474959.1 CDS cdtA NC_011852.1 354590 355270 R cytolethal distending toxin protein A complement(354590..355270) Haemophilus parasuis SH0165 7277308 YP_002474960.1 CDS tgt NC_011852.1 355390 356547 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(355390..356547) Haemophilus parasuis SH0165 7277309 YP_002474961.1 CDS gyrB NC_011852.1 356627 359059 R COG:L;COG0187; DNA gyrase subunit B complement(356627..359059) Haemophilus parasuis SH0165 7277310 YP_002474962.1 CDS yajC NC_011852.1 359314 359826 D preprotein translocase subunit YajC 359314..359826 Haemophilus parasuis SH0165 7277311 YP_002474963.1 CDS sirA NC_011852.1 359826 360056 D COG:O;COG0425; SirA protein/redox protein, regulator of disulfide bond formation 359826..360056 Haemophilus parasuis SH0165 7277312 YP_002474964.1 CDS HAPS_0331 NC_011852.1 360079 360423 R COG:S;COG3094; hypothetical protein complement(360079..360423) Haemophilus parasuis SH0165 7277313 YP_002474965.1 CDS HAPS_0332 NC_011852.1 360439 360972 R COG:S;COG3028; hypothetical protein complement(360439..360972) Haemophilus parasuis SH0165 7277314 YP_002474966.1 CDS pmbA NC_011852.1 361101 362450 D COG:R;COG0312; antibiotic maturation factor PmbA 361101..362450 Haemophilus parasuis SH0165 7277315 YP_002474967.1 CDS leuD NC_011852.1 363517 364122 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(363517..364122) Haemophilus parasuis SH0165 7277317 YP_002474968.1 CDS leuC NC_011852.1 364134 365540 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(364134..365540) Haemophilus parasuis SH0165 7277318 YP_002474969.1 CDS HAPS_0337 NC_011852.1 365847 365963 D hypothetical protein 365847..365963 Haemophilus parasuis SH0165 7277319 YP_002474970.1 CDS proP NC_011852.1 365957 367153 R Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system protein complement(365957..367153) Haemophilus parasuis SH0165 7277320 YP_002474971.1 CDS rsuA NC_011852.1 367154 367846 R COG:J;COG1187; ribosomal small subunit pseudouridine synthase A complement(367154..367846) Haemophilus parasuis SH0165 7277321 YP_002474972.1 CDS cpxA NC_011852.1 367929 369305 R part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein complement(367929..369305) Haemophilus parasuis SH0165 7277322 YP_002474973.1 CDS cpxR NC_011852.1 369375 370100 R COG:TK;COG0745; transcriptional regulatory protein CpxR/response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain complement(369375..370100) Haemophilus parasuis SH0165 7277323 YP_002474974.1 CDS mazG NC_011852.1 370200 370976 R COG:R;COG1694; nucleoside triphosphate pyrophosphohydrolase complement(370200..370976) Haemophilus parasuis SH0165 7277324 YP_002474975.1 CDS pepP NC_011852.1 371451 372776 D COG:E;COG0006; Xaa-Pro aminopeptidase 371451..372776 Haemophilus parasuis SH0165 7277325 YP_002474976.1 CDS phd NC_011852.1 372840 373103 D COG:D;COG4118; prevent-host-death family protein, antitoxin of a toxin/antitoxin system, phd-like protein 372840..373103 Haemophilus parasuis SH0165 7277326 YP_002474977.1 CDS pilT NC_011852.1 373100 373507 D unknown function but a role in signaling; COG:S;COG3744; pilT domain-containing protein 373100..373507 Haemophilus parasuis SH0165 7277327 YP_002474978.1 CDS serC NC_011852.1 373572 374654 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 373572..374654 Haemophilus parasuis SH0165 7277328 YP_002474979.1 CDS HAPS_0347 NC_011852.1 374775 375746 R COG:L;COG3547; ISNme5, family IS110 complement(374775..375746) Haemophilus parasuis SH0165 7277329 YP_002474980.1 CDS hsdM NC_011852.1 375987 377675 D COG:V;COG0286; Type I restriction-modification system methyltransferase subunit 375987..377675 Haemophilus parasuis SH0165 7277330 YP_002474981.1 CDS hsdS NC_011852.1 377668 379032 D COG:V;COG0732; Type I restriction-modification system, S subunit/Type I restriction modification DNA specificity domain-containing protein 377668..379032 Haemophilus parasuis SH0165 7277331 YP_002474982.1 CDS hsdR NC_011852.1 379862 383026 D COG:V;COG0610; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 379862..383026 Haemophilus parasuis SH0165 7277332 YP_002474983.1 CDS hisC NC_011852.1 383061 384155 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 383061..384155 Haemophilus parasuis SH0165 7277333 YP_002474984.1 CDS HAPS_0352 NC_011852.1 384422 384682 D hypothetical protein 384422..384682 Haemophilus parasuis SH0165 7277334 YP_002474985.1 CDS asnC NC_011852.1 385126 386529 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(385126..386529) Haemophilus parasuis SH0165 7277336 YP_002474986.1 CDS irp NC_011852.1 386743 389136 R COG:P;COG1629; iron-regulated outer membrane protein/TonB-dependent receptor complement(386743..389136) Haemophilus parasuis SH0165 7277337 YP_002474987.1 CDS ppx NC_011852.1 389322 390821 D COG:FP;COG0248; exopolyphosphatase, Ppx/GppA phosphatase 389322..390821 Haemophilus parasuis SH0165 7277338 YP_002474988.1 CDS ppc NC_011852.1 390982 393621 D catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 390982..393621 Haemophilus parasuis SH0165 7277339 YP_002474989.1 CDS aroA NC_011852.1 393869 395026 D COG:E;COG0128; 3-phosphoshikimate 1-carboxyvinyltransferase 393869..395026 Haemophilus parasuis SH0165 7277340 YP_002474990.1 CDS cspD NC_011852.1 395181 395390 R COG:K;COG1278; cold shock-like protein CspD complement(395181..395390) Haemophilus parasuis SH0165 7277341 YP_002474991.1 CDS bcp NC_011852.1 395596 396075 D COG:O;COG1225; thioredoxin-dependent thiol peroxidase 395596..396075 Haemophilus parasuis SH0165 7277342 YP_002474992.1 CDS gmhB NC_011852.1 396065 396634 D Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 396065..396634 Haemophilus parasuis SH0165 7277343 YP_002474993.1 CDS hpt NC_011852.1 396768 397307 D COG:F;COG0634; hypoxanthine-guanine phosphoribosyltransferase 396768..397307 Haemophilus parasuis SH0165 7277344 YP_002474994.1 CDS slt NC_011852.1 397400 399475 D COG:M;COG0741; putative soluble lytic murein transglycosylase 397400..399475 Haemophilus parasuis SH0165 7277345 YP_002474995.1 CDS HAPS_0364 NC_011852.1 399565 400107 D ATPases of ABC transporters with duplicated ATPase domains-containing protein 399565..400107 Haemophilus parasuis SH0165 7277346 YP_002474996.1 CDS fieF NC_011852.1 400107 400994 D COG:P;COG0053; cation-efflux pump FieF Co/Zn/Cd cation transporter 400107..400994 Haemophilus parasuis SH0165 7277347 YP_002474997.1 CDS HAPS_0366 NC_011852.1 401166 402152 R COG:L;COG3547; ISCro4, family IS110 complement(401166..402152) Haemophilus parasuis SH0165 7276925 YP_002474998.1 CDS menC NC_011852.1 402604 403590 D catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 402604..403590 Haemophilus parasuis SH0165 7276926 YP_002474999.1 CDS HAPS_0370 NC_011852.1 408169 408552 R COG:S;COG3112; hypothetical protein complement(408169..408552) Haemophilus parasuis SH0165 7276929 YP_002475000.1 CDS uvrA NC_011852.1 408637 411465 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(408637..411465) Haemophilus parasuis SH0165 7276930 YP_002475001.1 CDS ssb NC_011852.1 411724 412242 D COG:L;COG0629; single-strand DNA-binding protein 411724..412242 Haemophilus parasuis SH0165 7276931 YP_002475002.1 CDS HAPS_0373 NC_011852.1 412450 413664 D COG:R;COG1373; ATPase ATPase (AAA+ superfamily) 412450..413664 Haemophilus parasuis SH0165 7276932 YP_002475003.1 CDS rhlB NC_011852.1 414054 415274 R COG:LKJ;COG0513; ATP-dependent RNA helicase RhlB complement(414054..415274) Haemophilus parasuis SH0165 7276934 YP_002475004.1 CDS higA NC_011852.1 415338 415610 R COG:R;COG3093; plasmid maintenance system antidote protein, XRE family/addiction module antidote protein, HigA family/PSEEN1946 proteic killer active protein complement(415338..415610) Haemophilus parasuis SH0165 7276935 YP_002475005.1 CDS higB NC_011852.1 415621 415899 R COG:R;COG3549; plasmid maintenance system killer/proteic killer protein, RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system complement(415621..415899) Haemophilus parasuis SH0165 7276936 YP_002475006.1 CDS arg NC_011852.1 416048 417058 D catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 416048..417058 Haemophilus parasuis SH0165 7276937 YP_002475007.1 CDS glyA NC_011852.1 417405 418667 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 417405..418667 Haemophilus parasuis SH0165 7276938 YP_002475008.1 CDS xseA NC_011852.1 418781 420109 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 418781..420109 Haemophilus parasuis SH0165 7276939 YP_002475009.1 CDS parC NC_011852.1 420143 422350 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(420143..422350) Haemophilus parasuis SH0165 7276940 YP_002475010.1 CDS HAPS_0382 NC_011852.1 422482 422847 D hypothetical protein 422482..422847 Haemophilus parasuis SH0165 7276941 YP_002475011.1 CDS mhpC NC_011852.1 423000 423782 R COG:R;COG0596; putative esterase complement(423000..423782) Haemophilus parasuis SH0165 7276942 YP_002475012.1 CDS seqA NC_011852.1 423890 424450 D negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 423890..424450 Haemophilus parasuis SH0165 7276943 YP_002475013.1 CDS menE NC_011852.1 424454 425869 D COG:IQ;COG0318; O-succinylbenzoic acid--CoA ligase 424454..425869 Haemophilus parasuis SH0165 7276944 YP_002475014.1 CDS kefA NC_011852.1 425862 429155 D small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 425862..429155 Haemophilus parasuis SH0165 7276945 YP_002475015.1 CDS aroC NC_011852.1 429281 430363 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 429281..430363 Haemophilus parasuis SH0165 7276946 YP_002475016.1 CDS higB NC_011852.1 430571 430846 D COG:R;COG3549; plasmid maintenance system killer/proteic killer protein, RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system 430571..430846 Haemophilus parasuis SH0165 7276947 YP_002475017.1 CDS higA NC_011852.1 430855 431151 D COG:R;COG3093; plasmid maintenance system antidote protein, XRE family/addiction module antidote protein, HigA family/PSEEN1946 proteic killer active protein 430855..431151 Haemophilus parasuis SH0165 7276948 YP_002475018.1 CDS mlc NC_011852.1 431167 432372 R COG:KG;COG1940; transcriptional repressor of carbohydrate metabolism; PTS operon /sugar kinase complement(431167..432372) Haemophilus parasuis SH0165 7276949 YP_002475019.1 CDS rnd NC_011852.1 432547 433674 D COG:J;COG0349; ribonuclease D 432547..433674 Haemophilus parasuis SH0165 7276950 YP_002475020.1 CDS ackA NC_011852.1 434123 435322 D COG:C;COG0282; acetate kinase 434123..435322 Haemophilus parasuis SH0165 7276951 YP_002475021.1 CDS HAPS_0394 NC_011852.1 435288 435443 R hypothetical protein complement(435288..435443) Haemophilus parasuis SH0165 7276952 YP_002475022.1 CDS pta NC_011852.1 435431 437566 D catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 435431..437566 Haemophilus parasuis SH0165 7276954 YP_002475023.1 CDS HAPS_0395 NC_011852.1 437677 438636 R COG:R;COG2984; ABC transporter substrate-binding protein complement(437677..438636) Haemophilus parasuis SH0165 7276953 YP_002475024.1 CDS sspB NC_011852.1 438815 439222 R COG:R;COG2969; ClpXP protease specificity-enhancing factor complement(438815..439222) Haemophilus parasuis SH0165 7276955 YP_002475025.1 CDS sspA NC_011852.1 439224 439865 R COG:O;COG0625; stringent starvation protein A/glutathione S-transferase complement(439224..439865) Haemophilus parasuis SH0165 7276956 YP_002475026.1 CDS HAPS_0398 NC_011852.1 440081 440398 D COG:S;COG2926; hypothetical protein 440081..440398 Haemophilus parasuis SH0165 7276957 YP_002475027.1 CDS folC NC_011852.1 440442 441740 R COG:H;COG0285; folylpolyglutamate synthase complement(440442..441740) Haemophilus parasuis SH0165 7276958 YP_002475028.1 CDS accD NC_011852.1 441740 442630 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(441740..442630) Haemophilus parasuis SH0165 7276959 YP_002475029.1 CDS chpA NC_011852.1 442718 443074 R COG:T;COG2337; growth inhibitor, PemK-like, autoregulated/transcriptional modulator of MazE/toxin, MazF, plasmid stable inheritance protein K complement(442718..443074) Haemophilus parasuis SH0165 7276960 YP_002475030.1 CDS chpS NC_011852.1 443074 443343 R COG:T;COG2336; antitoxin ChpS/ transcriptional regulator/antitoxin complement(443074..443343) Haemophilus parasuis SH0165 7276961 YP_002475031.1 CDS aspC NC_011852.1 443594 444784 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 443594..444784 Haemophilus parasuis SH0165 7276962 YP_002475032.1 CDS HAPS_0404 NC_011852.1 444865 445779 R COG:GER;COG0697; drug/metabolite exporter family transporter complement(444865..445779) Haemophilus parasuis SH0165 7276963 YP_002475033.1 CDS HAPS_0405 NC_011852.1 445980 447038 D COG:R;COG2081; flavoprotein 445980..447038 Haemophilus parasuis SH0165 7276964 YP_002475034.1 CDS nanA NC_011852.1 447102 447983 R COG:EM;COG0329; N-acetylneuraminate lyase complement(447102..447983) Haemophilus parasuis SH0165 7276965 YP_002475035.1 CDS HAPS_0407 NC_011852.1 448065 448931 R COG:K;COG1737; putative HTH-type transcriptional regulator complement(448065..448931) Haemophilus parasuis SH0165 7276966 YP_002475036.1 CDS HAPS_0408 NC_011852.1 448933 449403 R COG:G;COG2731; hypothetical protein complement(448933..449403) Haemophilus parasuis SH0165 7276967 YP_002475037.1 CDS higB NC_011852.1 450581 450859 D COG:R;COG3549; plasmid maintenance system killer/proteic killer protein, RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system 450581..450859 Haemophilus parasuis SH0165 7276969 YP_002475038.1 CDS higA NC_011852.1 450871 451152 D COG:R;COG3093; plasmid maintenance system antidote protein, XRE family/addiction module antidote protein, HigA family/PSEEN1946 proteic killer active protein 450871..451152 Haemophilus parasuis SH0165 7276970 YP_002475039.1 CDS HAPS_0412 NC_011852.1 451149 451886 R COG:S;COG4672; phage-like minor tail protein L complement(451149..451886) Haemophilus parasuis SH0165 7276971 YP_002475040.1 CDS HAPS_0415 NC_011852.1 453224 454711 R chromosome segregation ATPase complement(453224..454711) Haemophilus parasuis SH0165 7276974 YP_002475041.1 CDS HAPS_0416 NC_011852.1 454829 455176 R putative phage-like lipoprotein complement(454829..455176) Haemophilus parasuis SH0165 7276975 YP_002475042.1 CDS HAPS_0417 NC_011852.1 455253 455579 R COG:S;COG4718; phage minor tail protein complement(455253..455579) Haemophilus parasuis SH0165 7276976 YP_002475043.1 CDS HAPS_0418 NC_011852.1 455581 455916 R hypothetical protein complement(455581..455916) Haemophilus parasuis SH0165 7276977 YP_002475044.1 CDS HAPS_0419 NC_011852.1 455925 456845 R hypothetical protein complement(455925..456845) Haemophilus parasuis SH0165 7276978 YP_002475045.1 CDS HAPS_0423 NC_011852.1 459049 459174 R hypothetical protein complement(459049..459174) Haemophilus parasuis SH0165 7276982 YP_002475046.1 CDS secG NC_011852.1 461000 461329 R COG:U;COG1314; preprotein translocase subunit SecG complement(461000..461329) Haemophilus parasuis SH0165 7276986 YP_002475047.1 CDS topB NC_011852.1 461455 463377 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(461455..463377) Haemophilus parasuis SH0165 7276987 YP_002475048.1 CDS mepA NC_011852.1 463385 464209 R D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase complement(463385..464209) Haemophilus parasuis SH0165 7276988 YP_002475049.1 CDS pyrG NC_011852.1 464567 464965 R COG:S;COG2363; CTP synthetase, potential integral membrane protein complement(464567..464965) Haemophilus parasuis SH0165 7276990 YP_002475050.1 CDS HAPS_0433 NC_011852.1 465228 465590 R COG:K;COG5499; putative transcription regulator containing HTH domain complement(465228..465590) Haemophilus parasuis SH0165 7276992 YP_002475051.1 CDS HAPS_0434 NC_011852.1 465600 465902 R COG:S;COG4680; hypothetical protein complement(465600..465902) Haemophilus parasuis SH0165 7276993 YP_002475052.1 CDS HAPS_0435 NC_011852.1 465922 466041 R hypothetical protein complement(465922..466041) Haemophilus parasuis SH0165 7276994 YP_002475053.1 CDS moaA NC_011852.1 466329 467348 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 466329..467348 Haemophilus parasuis SH0165 7276995 YP_002475054.1 CDS moaC NC_011852.1 467502 467981 D COG:H;COG0315; molybdenum cofactor biosynthesis protein C 467502..467981 Haemophilus parasuis SH0165 7276996 YP_002475055.1 CDS moaD NC_011852.1 468066 468311 D catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit 468066..468311 Haemophilus parasuis SH0165 7276997 YP_002475056.1 CDS moaE NC_011852.1 468312 468764 D COG:H;COG0314; molybdopterin converting factor, large subunit 468312..468764 Haemophilus parasuis SH0165 7276998 YP_002475057.1 CDS HAPS_0440 NC_011852.1 468796 469284 D COG:R;COG0319; putative metalloprotease 468796..469284 Haemophilus parasuis SH0165 7276999 YP_002475058.1 CDS HAPS_0441 NC_011852.1 469284 471134 D COG:R;COG1444; acetyltransferase 469284..471134 Haemophilus parasuis SH0165 7277000 YP_002475059.1 CDS mglB NC_011852.1 471259 472251 D COG:G;COG1879; galactose ABC transporter periplasmic-binding protein/LacI transcriptional regulator 471259..472251 Haemophilus parasuis SH0165 7277001 YP_002475060.1 CDS mglA NC_011852.1 472304 473824 D with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein 472304..473824 Haemophilus parasuis SH0165 7277002 YP_002475061.1 CDS mglC NC_011852.1 473841 474851 D ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane protein 473841..474851 Haemophilus parasuis SH0165 7277003 YP_002475062.1 CDS metQ NC_011852.1 475028 475819 R COG:P;COG1464; DL-methionine transporter substrate-binding subunit/outer membrane lipoprotein 3 (PLP3) complement(475028..475819) Haemophilus parasuis SH0165 7277004 YP_002475063.1 CDS plpA NC_011852.1 475891 476730 R COG:P;COG1464; metal ion ABC transporter periplasmic component/outer membrane lipoprotein 1 complement(475891..476730) Haemophilus parasuis SH0165 7277005 YP_002475064.1 CDS metI NC_011852.1 476763 477440 R COG:P;COG2011; D-methionine transport system permease protein MetI complement(476763..477440) Haemophilus parasuis SH0165 7278452 YP_002475065.1 CDS metN NC_011852.1 477430 478464 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(477430..478464) Haemophilus parasuis SH0165 7278453 YP_002475066.1 CDS marC NC_011852.1 478741 479394 D COG:U;COG2095; hypothetical protein 478741..479394 Haemophilus parasuis SH0165 7278454 YP_002475067.1 CDS oppA NC_011852.1 479396 480937 D COG:E;COG4166; putative oligopeptide transporter, periplasmic-binding protein, OppA 479396..480937 Haemophilus parasuis SH0165 7278455 YP_002475068.1 CDS mrp NC_011852.1 480938 482035 D COG:D;COG0489; putative ATPase 480938..482035 Haemophilus parasuis SH0165 7278456 YP_002475069.1 CDS argE NC_011852.1 486714 487856 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 486714..487856 Haemophilus parasuis SH0165 7278458 YP_002475070.1 CDS moeB NC_011852.1 488005 488748 R ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB complement(488005..488748) Haemophilus parasuis SH0165 7278459 YP_002475071.1 CDS yciH NC_011852.1 488751 489050 R COG:J;COG0023; translation initiation factor Sui1, translation initiation factor 1 (eIF-1/SUI1) complement(488751..489050) Haemophilus parasuis SH0165 7278460 YP_002475072.1 CDS pyrF NC_011852.1 489082 489774 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(489082..489774) Haemophilus parasuis SH0165 7278461 YP_002475073.1 CDS HAPS_0457 NC_011852.1 489790 490983 R COG:G;COG2956; tetratricopeptide repeat protein complement(489790..490983) Haemophilus parasuis SH0165 7278462 YP_002475074.1 CDS HAPS_0458 NC_011852.1 490983 491267 R COG:S;COG3771; hypothetical protein complement(490983..491267) Haemophilus parasuis SH0165 7278463 YP_002475075.1 CDS ihfB NC_011852.1 491336 491617 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta complement(491336..491617) Haemophilus parasuis SH0165 7278464 YP_002475076.1 CDS rpsA NC_011852.1 491683 493350 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(491683..493350) Haemophilus parasuis SH0165 7278465 YP_002475077.1 CDS cmk NC_011852.1 493447 494112 R COG:F;COG0283; cytidylate kinase complement(493447..494112) Haemophilus parasuis SH0165 7278466 YP_002475078.1 CDS degS NC_011852.1 494122 495150 R COG:O;COG0265; protease DegS complement(494122..495150) Haemophilus parasuis SH0165 7278467 YP_002475079.1 CDS galU NC_011852.1 495260 496147 R COG:M;COG1210; UTP-glucose-1-phosphate uridylyltransferase complement(495260..496147) Haemophilus parasuis SH0165 7278468 YP_002475080.1 CDS csrA NC_011852.1 496327 496512 R affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator complement(496327..496512) Haemophilus parasuis SH0165 7278469 YP_002475081.1 CDS alaS NC_011852.1 496576 499203 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(496576..499203) Haemophilus parasuis SH0165 7278470 YP_002475082.1 CDS uspA NC_011852.1 499428 499853 R COG:T;COG0589; universal stress protein A complement(499428..499853) Haemophilus parasuis SH0165 7278471 YP_002475083.1 CDS rec2 NC_011852.1 500165 502444 D COG:R;COG0658; recombination protein 2 500165..502444 Haemophilus parasuis SH0165 7278472 YP_002475084.1 CDS yciI NC_011852.1 502612 502908 R unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein complement(502612..502908) Haemophilus parasuis SH0165 7278473 YP_002475085.1 CDS HAPS_0469 NC_011852.1 502920 503360 R COG:I;COG1607; putative acyl-CoA thioester hydrolase complement(502920..503360) Haemophilus parasuis SH0165 7278474 YP_002475086.1 CDS ispZ NC_011852.1 503344 503907 R Involved in cell division; probably involved in intracellular septation; intracellular septation protein A complement(503344..503907) Haemophilus parasuis SH0165 7278475 YP_002475087.1 CDS HAPS_0471 NC_011852.1 503916 504644 R hypothetical protein complement(503916..504644) Haemophilus parasuis SH0165 7278476 YP_002475088.1 CDS HAPS_0472 NC_011852.1 504823 505257 D COG:S;COG3092; membrane protein 504823..505257 Haemophilus parasuis SH0165 7278477 YP_002475089.1 CDS tadA NC_011852.1 505239 505712 R COG:FJ;COG0590; tRNA-adenosine deaminase complement(505239..505712) Haemophilus parasuis SH0165 7278478 YP_002475090.1 CDS deaD NC_011852.1 505873 507684 R COG:LKJ;COG0513; cold-shock DEAD box protein A-like protein complement(505873..507684) Haemophilus parasuis SH0165 7278479 YP_002475091.1 CDS nlpI NC_011852.1 507956 508882 R lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI complement(507956..508882) Haemophilus parasuis SH0165 7278480 YP_002475092.1 CDS pnp NC_011852.1 508956 511085 R COG:J;COG1185; polynucleotide phosphorylase/polyadenylase complement(508956..511085) Haemophilus parasuis SH0165 7278481 YP_002475093.1 CDS ushA NC_011852.1 513446 515092 R catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic complement(513446..515092) Haemophilus parasuis SH0165 7278483 YP_002475094.1 CDS dgkA NC_011852.1 515139 515501 R COG:M;COG0818; diacylglycerol kinase complement(515139..515501) Haemophilus parasuis SH0165 7278484 YP_002475095.1 CDS arcB NC_011852.1 515659 517893 R COG:T;COG0642; aerobic respiration control sensor protein ArcB complement(515659..517893) Haemophilus parasuis SH0165 7278485 YP_002475096.1 CDS ostA NC_011852.1 517979 520231 R determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein complement(517979..520231) Haemophilus parasuis SH0165 7278486 YP_002475097.1 CDS hemN NC_011852.1 520380 521747 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(520380..521747) Haemophilus parasuis SH0165 7278487 YP_002475098.1 CDS HAPS_0483 NC_011852.1 521750 522196 R ATP-dependent Lon protease complement(521750..522196) Haemophilus parasuis SH0165 7278488 YP_002475099.1 CDS HAPS_0484 NC_011852.1 522205 522738 R COG:S;COG3078; hypothetical protein complement(522205..522738) Haemophilus parasuis SH0165 7278489 YP_002475100.1 CDS sanA NC_011852.1 522875 523582 R COG:S;COG2949; SanA protein, membrane protein complement(522875..523582) Haemophilus parasuis SH0165 7278490 YP_002475101.1 CDS HAPS_0486 NC_011852.1 523586 524479 R COG:GER;COG0697; transporter, drug/metabolite exporter family complement(523586..524479) Haemophilus parasuis SH0165 7278491 YP_002475102.1 CDS HAPS_0489 NC_011852.1 525459 527768 R COG:K;COG2183; transcriptional accessory protein (S1 RNA binding domain) complement(525459..527768) Haemophilus parasuis SH0165 7278494 YP_002475103.1 CDS lpdA NC_011852.1 527899 529323 R E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(527899..529323) Haemophilus parasuis SH0165 7278495 YP_002475104.1 CDS aceF NC_011852.1 529440 531065 R COG:C;COG0508; dihydrolipoamide acetyltransferase complement(529440..531065) Haemophilus parasuis SH0165 7278496 YP_002475105.1 CDS aceE NC_011852.1 531120 533777 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(531120..533777) Haemophilus parasuis SH0165 7278497 YP_002475106.1 CDS HAPS_0493 NC_011852.1 533880 534038 R hypothetical protein complement(533880..534038) Haemophilus parasuis SH0165 7278498 YP_002475107.1 CDS purE NC_011852.1 534159 534653 D COG:F;COG0041; phosphoribosylaminoimidazole carboxylasecatalytic subunit 534159..534653 Haemophilus parasuis SH0165 7278499 YP_002475108.1 CDS ansB NC_011852.1 534699 535619 D COG:EJ;COG0252; L-asparaginase 534699..535619 Haemophilus parasuis SH0165 7278500 YP_002475109.1 CDS purK NC_011852.1 535739 536833 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 535739..536833 Haemophilus parasuis SH0165 7278501 YP_002475110.1 CDS ppiB NC_011852.1 536927 537436 D COG:O;COG0652; peptidyl-prolyl isomerase 536927..537436 Haemophilus parasuis SH0165 7278502 YP_002475111.1 CDS ubiG NC_011852.1 537504 538214 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 537504..538214 Haemophilus parasuis SH0165 7278503 YP_002475112.1 CDS metK NC_011852.1 543374 544522 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(543374..544522) Haemophilus parasuis SH0165 7278505 YP_002475113.1 CDS mnmC NC_011852.1 545041 547044 D catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 545041..547044 Haemophilus parasuis SH0165 7278506 YP_002475114.1 CDS HAPS_0502 NC_011852.1 547171 547941 R COG:S;COG0327; hypothetical protein complement(547171..547941) Haemophilus parasuis SH0165 7278507 YP_002475115.1 CDS moeA NC_011852.1 548331 549563 R COG:H;COG0303; molybdopterin biosynthesis protein MoeA complement(548331..549563) Haemophilus parasuis SH0165 7278510 YP_002475116.1 CDS HAPS_0506 NC_011852.1 549821 550792 D COG:L;COG3547; ISNme5, family IS110 549821..550792 Haemophilus parasuis SH0165 7278511 YP_002475117.1 CDS marC NC_011852.1 550861 551484 R COG:U;COG2095; multiple antibiotic resistance (MarC)-like protein complement(550861..551484) Haemophilus parasuis SH0165 7278512 YP_002475118.1 CDS HAPS_0509 NC_011852.1 553596 553838 R hypothetical protein complement(553596..553838) Haemophilus parasuis SH0165 7278514 YP_002475119.1 CDS ftsH NC_011852.1 553807 555735 R COG:O;COG0465; cell division protein complement(553807..555735) Haemophilus parasuis SH0165 7278515 YP_002475120.1 CDS rrmJ NC_011852.1 555809 556435 R Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J complement(555809..556435) Haemophilus parasuis SH0165 7278516 YP_002475121.1 CDS fabI NC_011852.1 556678 557466 D COG:I;COG0623; enoyl-[acyl-carrier-protein] reductase (NADH) 556678..557466 Haemophilus parasuis SH0165 7278517 YP_002475122.1 CDS fic NC_011852.1 557546 558208 D filamentation induced by cAMP protein fic 557546..558208 Haemophilus parasuis SH0165 7278518 YP_002475123.1 CDS HAPS_0514 NC_011852.1 558266 558562 R COG:K;COG2944; putative helix-turn-helix containing protein complement(558266..558562) Haemophilus parasuis SH0165 7278519 YP_002475124.1 CDS HAPS_0515 NC_011852.1 558565 558909 R COG:JD;COG2026; hypothetical protein complement(558565..558909) Haemophilus parasuis SH0165 7278520 YP_002475125.1 CDS rnb NC_011852.1 559124 561103 D Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 559124..561103 Haemophilus parasuis SH0165 7278521 YP_002475126.1 CDS mltA NC_011852.1 561214 562305 D membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A 561214..562305 Haemophilus parasuis SH0165 7278522 YP_002475127.1 CDS HAPS_0518 NC_011852.1 562780 563196 D hypothetical protein 562780..563196 Haemophilus parasuis SH0165 7278523 YP_002475128.1 CDS HAPS_0520 NC_011852.1 566989 567102 R hypothetical protein complement(566989..567102) Haemophilus parasuis SH0165 7278525 YP_002475129.1 CDS dedA NC_011852.1 567452 568048 R COG:S;COG0586; DedA family integral membrane protein, hypothetical protein complement(567452..568048) Haemophilus parasuis SH0165 7278526 YP_002475130.1 CDS purR NC_011852.1 568059 569081 R binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR complement(568059..569081) Haemophilus parasuis SH0165 7278527 YP_002475131.1 CDS prmC NC_011852.1 569195 570139 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(569195..570139) Haemophilus parasuis SH0165 7278528 YP_002475132.1 CDS HAPS_0524 NC_011852.1 570226 570756 D COG:S;COG2840; hypothetical protein 570226..570756 Haemophilus parasuis SH0165 7278529 YP_002475133.1 CDS tyrP NC_011852.1 570898 572115 R COG:E;COG0814; tyrosine-specific transporter complement(570898..572115) Haemophilus parasuis SH0165 7278530 YP_002475134.1 CDS tyrP NC_011852.1 572263 573417 R COG:E;COG0814; tyrosine-specific transporter complement(572263..573417) Haemophilus parasuis SH0165 7278531 YP_002475135.1 CDS purL NC_011852.1 574273 574752 R COG:OC;COG0526; phosphoribosylformylglycinamidine synthase complement(574273..574752) Haemophilus parasuis SH0165 7278533 YP_002475136.1 CDS ccdA NC_011852.1 574770 575420 R COG:O;COG0785; cytochrome c-type biogenesis protein ccdA complement(574770..575420) Haemophilus parasuis SH0165 7277266 YP_002475137.1 CDS msrA NC_011852.1 575422 576492 R COG:O;COG0225; bifunctional methionine sulfoxide reductase msrA/msrB complement(575422..576492) Haemophilus parasuis SH0165 7276679 YP_002475138.1 CDS HAPS_0531 NC_011852.1 576596 576925 R hypothetical protein complement(576596..576925) Haemophilus parasuis SH0165 7276680 YP_002475139.1 CDS rpoE NC_011852.1 577169 577639 D COG:K;COG1595; RNA polymerase sigma-70 factor 577169..577639 Haemophilus parasuis SH0165 7276681 YP_002475140.1 CDS HAPS_0533 NC_011852.1 577636 577821 D hypothetical protein 577636..577821 Haemophilus parasuis SH0165 7276682 YP_002475141.1 CDS HAPS_0536 NC_011852.1 579397 580212 D phage capsid scaffolding protein 579397..580212 Haemophilus parasuis SH0165 7276685 YP_002475142.1 CDS HAPS_0538 NC_011852.1 580428 581081 D phage small terminase subunit 580428..581081 Haemophilus parasuis SH0165 7276687 YP_002475143.1 CDS HAPS_0540 NC_011852.1 581237 581761 D COG:R;COG3772; phage-like lysozyme 581237..581761 Haemophilus parasuis SH0165 7276689 YP_002475144.1 CDS HAPS_0541 NC_011852.1 581746 582213 D hypothetical bacteriophage protein 581746..582213 Haemophilus parasuis SH0165 7276690 YP_002475145.1 CDS HAPS_0542 NC_011852.1 582396 582914 D putative Lhr family helicase, phage associatd 582396..582914 Haemophilus parasuis SH0165 7276691 YP_002475146.1 CDS dnaK NC_011852.1 583120 583338 D COG:T;COG1734; DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR family 583120..583338 Haemophilus parasuis SH0165 7276692 YP_002475147.1 CDS gpR NC_011852.1 583335 583769 D bacteriophage P2 Tail completion protein GPR 583335..583769 Haemophilus parasuis SH0165 7276693 YP_002475148.1 CDS gpS NC_011852.1 583810 584271 D bacteriophage tail completion protein gpS-like protein/phage virion morphogenesis protein 583810..584271 Haemophilus parasuis SH0165 7276694 YP_002475149.1 CDS HAPS_0546 NC_011852.1 584367 584552 R hypothetical protein complement(584367..584552) Haemophilus parasuis SH0165 7276695 YP_002475150.1 CDS gpT NC_011852.1 584682 587423 D COG:S;COG5283; bacteriophage P2 tail protein GPT; putative tail length determinator 584682..587423 Haemophilus parasuis SH0165 7276696 YP_002475151.1 CDS HAPS_0548 NC_011852.1 587550 588092 D hypothetical protein 587550..588092 Haemophilus parasuis SH0165 7276697 YP_002475152.1 CDS HAPS_0549 NC_011852.1 588085 588507 D hypothetical protein 588085..588507 Haemophilus parasuis SH0165 7276698 YP_002475153.1 CDS HAPS_0550 NC_011852.1 588682 588801 D hypothetical protein 588682..588801 Haemophilus parasuis SH0165 7276699 YP_002475154.1 CDS ycfA NC_011852.1 590265 590450 D COG:N;COG1724; hypothetical protein 590265..590450 Haemophilus parasuis SH0165 7276701 YP_002475155.1 CDS HAPS_0553 NC_011852.1 590480 590917 D COG:S;COG1598; hypothetical protein 590480..590917 Haemophilus parasuis SH0165 7276702 YP_002475156.1 CDS HAPS_0554 NC_011852.1 590939 591316 R putative phage anti-termination protein Q complement(590939..591316) Haemophilus parasuis SH0165 7276703 YP_002475157.1 CDS ninG NC_011852.1 591313 591882 R NinG recombination protein/bacteriophage lambda NinG family protein complement(591313..591882) Haemophilus parasuis SH0165 7276704 YP_002475158.1 CDS ninB NC_011852.1 592027 592476 R putative recombination protein NinB complement(592027..592476) Haemophilus parasuis SH0165 7276705 YP_002475159.1 CDS HAPS_0557 NC_011852.1 592711 593382 R putative bacteriophage replication protein P complement(592711..593382) Haemophilus parasuis SH0165 7276706 YP_002475160.1 CDS HAPS_0558 NC_011852.1 593382 594212 R putative phage DNA replication protein O complement(593382..594212) Haemophilus parasuis SH0165 7276707 YP_002475161.1 CDS HAPS_0559 NC_011852.1 594209 594991 R prophage antirepressor DNA-binding protein (Roi) complement(594209..594991) Haemophilus parasuis SH0165 7276708 YP_002475162.1 CDS HAPS_0560 NC_011852.1 595271 595477 R prophage LambdaSo, Cro/CI family transcriptional regulator/ putative Cro repressor complement(595271..595477) Haemophilus parasuis SH0165 7276709 YP_002475163.1 CDS HAPS_0561 NC_011852.1 595739 596266 D COG:KT;COG1974; putative prophage repressor CI, XRE family transcriptional regulator/SOS-response transcriptional repressors (RecA-mediated autopeptidases)/ LexA family repressor/S24 family protease 595739..596266 Haemophilus parasuis SH0165 7276710 YP_002475164.1 CDS HAPS_0562 NC_011852.1 596299 596733 D hypothetical protein 596299..596733 Haemophilus parasuis SH0165 7276711 YP_002475165.1 CDS HAPS_0563 NC_011852.1 596726 597202 D hypothetical protein 596726..597202 Haemophilus parasuis SH0165 7276712 YP_002475166.1 CDS ycfA NC_011852.1 597320 597502 D hypothetical protein 597320..597502 Haemophilus parasuis SH0165 7276713 YP_002475167.1 CDS HAPS_0565 NC_011852.1 597542 597961 D COG:S;COG1598; putative bacteriophage protein transcription regulator, cro/C1-type DNA-binding domain 597542..597961 Haemophilus parasuis SH0165 7276714 YP_002475168.1 CDS HAPS_0566 NC_011852.1 598384 598539 D hypothetical protein 598384..598539 Haemophilus parasuis SH0165 7276715 YP_002475169.1 CDS HAPS_0567 NC_011852.1 598817 599104 D hypothetical protein 598817..599104 Haemophilus parasuis SH0165 7276716 YP_002475170.1 CDS HAPS_0568 NC_011852.1 599131 599301 R COG:S;COG3422; hypothetical protein complement(599131..599301) Haemophilus parasuis SH0165 7276717 YP_002475171.1 CDS orfG NC_011852.1 599316 599537 D hypothetical protein 599316..599537 Haemophilus parasuis SH0165 7276718 YP_002475172.1 CDS HAPS_0570 NC_011852.1 599674 599802 R hypothetical protein complement(599674..599802) Haemophilus parasuis SH0165 7276719 YP_002475173.1 CDS HAPS_0571 NC_011852.1 599879 600520 D hypothetical protein 599879..600520 Haemophilus parasuis SH0165 7276720 YP_002475174.1 CDS HAPS_0572 NC_011852.1 600597 600725 D hypothetical protein 600597..600725 Haemophilus parasuis SH0165 7276721 YP_002475175.1 CDS HAPS_0573 NC_011852.1 600730 601443 D protein serine/threonine phosphatase, protein phosphatase 2C-like protein 600730..601443 Haemophilus parasuis SH0165 7276722 YP_002475176.1 CDS HAPS_0575 NC_011852.1 601989 602309 D hypothetical protein 601989..602309 Haemophilus parasuis SH0165 7276724 YP_002475177.1 CDS HAPS_0576 NC_011852.1 602306 602845 D hypothetical protein 602306..602845 Haemophilus parasuis SH0165 7276725 YP_002475178.1 CDS HAPS_0577 NC_011852.1 602832 603038 D hypothetical protein 602832..603038 Haemophilus parasuis SH0165 7276726 YP_002475179.1 CDS HAPS_0578 NC_011852.1 603035 603973 D COG:L;COG3723; phage recombinase, recombinational DNA repair protein, RecE pathway 603035..603973 Haemophilus parasuis SH0165 7276727 YP_002475180.1 CDS HAPS_0579 NC_011852.1 604027 604695 D hypothetical protein 604027..604695 Haemophilus parasuis SH0165 7276728 YP_002475181.1 CDS ssb NC_011852.1 604695 605174 D COG:L;COG0629; single-stranded DNA binding protein 604695..605174 Haemophilus parasuis SH0165 7276729 YP_002475182.1 CDS HAPS_0581 NC_011852.1 605220 605408 R hypothetical protein complement(605220..605408) Haemophilus parasuis SH0165 7276730 YP_002475183.1 CDS HAPS_0582 NC_011852.1 605755 606672 D intrrupted gp229, phage associated 605755..606672 Haemophilus parasuis SH0165 7276731 YP_002475184.1 CDS HAPS_0583 NC_011852.1 606696 606959 D hypothetical protein 606696..606959 Haemophilus parasuis SH0165 7276732 YP_002475185.1 CDS HAPS_0584 NC_011852.1 607103 607321 R hypothetical protein complement(607103..607321) Haemophilus parasuis SH0165 7276733 YP_002475186.1 CDS HAPS_0585 NC_011852.1 607748 608044 R hypothetical protein complement(607748..608044) Haemophilus parasuis SH0165 7276734 YP_002475187.1 CDS HAPS_0586 NC_011852.1 608153 609130 R hypothetical protein complement(608153..609130) Haemophilus parasuis SH0165 7276735 YP_002475188.1 CDS HAPS_0587 NC_011852.1 609187 614070 R COG:S;COG4733; phage tail protein/putative Fels-1 prophage host specificity protein complement(609187..614070) Haemophilus parasuis SH0165 7276736 YP_002475189.1 CDS HAPS_0588 NC_011852.1 614189 615034 R COG:K;COG3617; putative antirepressor protein complement(614189..615034) Haemophilus parasuis SH0165 7276737 YP_002475190.1 CDS HAPS_0589 NC_011852.1 615298 615483 R hypothetical protein complement(615298..615483) Haemophilus parasuis SH0165 7276738 YP_002475191.1 CDS HAPS_0590 NC_011852.1 615597 616115 R COG:S;COG4723; bacteriophage lambda tail assembly I complement(615597..616115) Haemophilus parasuis SH0165 7276739 YP_002475192.1 CDS HAPS_0591 NC_011852.1 616145 616897 R phage-like tail assembly protein K complement(616145..616897) Haemophilus parasuis SH0165 7276740 YP_002475193.1 CDS HAPS_0592 NC_011852.1 616899 617636 R COG:S;COG4672; phage-like minor tail protein L complement(616899..617636) Haemophilus parasuis SH0165 7276741 YP_002475194.1 CDS HAPS_0593 NC_011852.1 617636 617968 R COG:S;COG4718; putative phage minor tail protein complement(617636..617968) Haemophilus parasuis SH0165 7276742 YP_002475195.1 CDS HAPS_0594 NC_011852.1 618013 621387 R phage-like minor tail protein complement(618013..621387) Haemophilus parasuis SH0165 7276743 YP_002475196.1 CDS HAPS_0595 NC_011852.1 621443 621718 R hypothetical protein complement(621443..621718) Haemophilus parasuis SH0165 7276744 YP_002475197.1 CDS HAPS_0596 NC_011852.1 621920 622186 R hypothetical protein complement(621920..622186) Haemophilus parasuis SH0165 7276745 YP_002475198.1 CDS relE NC_011852.1 622270 622539 R COG:S;COG3041; addiction module antitoxin complement(622270..622539) Haemophilus parasuis SH0165 7276746 YP_002475199.1 CDS relB NC_011852.1 622543 622809 R COG:L;COG3077; RelB, addiction module antitoxin/DNA-damage-inducible protein J, negative regulator of translation complement(622543..622809) Haemophilus parasuis SH0165 7276747 YP_002475200.1 CDS HAPS_0599 NC_011852.1 622878 623105 R phage protein complement(622878..623105) Haemophilus parasuis SH0165 7276748 YP_002475201.1 CDS HAPS_0600 NC_011852.1 623150 623551 R phage protein complement(623150..623551) Haemophilus parasuis SH0165 7276749 YP_002475202.1 CDS HAPS_0601 NC_011852.1 623625 624290 R phage protein complement(623625..624290) Haemophilus parasuis SH0165 7276750 YP_002475203.1 CDS HAPS_0602 NC_011852.1 624293 624712 R putative tail component of prophage CP-933K complement(624293..624712) Haemophilus parasuis SH0165 7276751 YP_002475204.1 CDS HAPS_0603 NC_011852.1 624712 625245 R putative phage tail component complement(624712..625245) Haemophilus parasuis SH0165 7276752 YP_002475205.1 CDS HAPS_0604 NC_011852.1 625249 625551 R putative bacteriophage tail protein complement(625249..625551) Haemophilus parasuis SH0165 7276753 YP_002475206.1 CDS HAPS_0605 NC_011852.1 625544 625870 R COG:S;COG5471; putative RecA/RadA recombinase complement(625544..625870) Haemophilus parasuis SH0165 7276754 YP_002475207.1 CDS HAPS_0606 NC_011852.1 625938 627905 R Clp protease-like protein complement(625938..627905) Haemophilus parasuis SH0165 7276755 YP_002475208.1 CDS HAPS_0607 NC_011852.1 627930 629429 R COG:R;COG5511; bacteriophage capsid protein complement(627930..629429) Haemophilus parasuis SH0165 7276756 YP_002475209.1 CDS HAPS_0608 NC_011852.1 629430 629651 R hypothetical protein complement(629430..629651) Haemophilus parasuis SH0165 7276757 YP_002475210.1 CDS HAPS_0609 NC_011852.1 629669 631789 R COG:R;COG5525; bacteriophage tail assembly protein/phage terminase large subunit complement(629669..631789) Haemophilus parasuis SH0165 7276758 YP_002475211.1 CDS HAPS_0610 NC_011852.1 631789 632301 R similar to protein encoded by prophage CP-933K; hypothetical protein complement(631789..632301) Haemophilus parasuis SH0165 7276759 YP_002475212.1 CDS HAPS_0611 NC_011852.1 632341 632787 R putative lytic protein Rz1, bacteriophage protein complement(632341..632787) Haemophilus parasuis SH0165 7276761 YP_002475213.1 CDS HAPS_0612 NC_011852.1 632750 633067 R hypothetical bacteriophage protein complement(632750..633067) Haemophilus parasuis SH0165 7276763 YP_002475214.1 CDS HAPS_0613 NC_011852.1 633067 633612 R COG:R;COG3772; glycoside hydrolase family protein/phage lysozyme complement(633067..633612) Haemophilus parasuis SH0165 7276764 YP_002475215.1 CDS HAPS_0614 NC_011852.1 633587 633862 R hypothetical protein complement(633587..633862) Haemophilus parasuis SH0165 7276765 YP_002475216.1 CDS HAPS_0615 NC_011852.1 633976 634539 D hypothetical protein 633976..634539 Haemophilus parasuis SH0165 7276766 YP_002475217.1 CDS HAPS_0616 NC_011852.1 634629 634745 D hypothetical protein 634629..634745 Haemophilus parasuis SH0165 7276767 YP_002475218.1 CDS HAPS_0617 NC_011852.1 634831 635007 R hypothetical protein complement(634831..635007) Haemophilus parasuis SH0165 7276768 YP_002475219.1 CDS HAPS_0618 NC_011852.1 635304 635522 D hypothetical protein 635304..635522 Haemophilus parasuis SH0165 7276769 YP_002475220.1 CDS HAPS_0619 NC_011852.1 635531 635908 R putative anti-termination protein Q, phage associated complement(635531..635908) Haemophilus parasuis SH0165 7276770 YP_002475221.1 CDS ninG NC_011852.1 635905 636474 R NinG recombination protein/bacteriophage lambda NinG family protein complement(635905..636474) Haemophilus parasuis SH0165 7276771 YP_002475222.1 CDS ninB NC_011852.1 636619 637068 R putative recombination protein NinB complement(636619..637068) Haemophilus parasuis SH0165 7276772 YP_002475223.1 CDS HAPS_0622 NC_011852.1 637303 637974 R replication protein P/putative bacteriophage replication protein complement(637303..637974) Haemophilus parasuis SH0165 7276773 YP_002475224.1 CDS HAPS_0623 NC_011852.1 637974 638804 R putative phage DNA replication protein O complement(637974..638804) Haemophilus parasuis SH0165 7276774 YP_002475225.1 CDS HAPS_0624 NC_011852.1 638801 639583 R prophage antirepressor protein 1/putative DNA-binding protein (Roi) complement(638801..639583) Haemophilus parasuis SH0165 7276775 YP_002475226.1 CDS HAPS_0625 NC_011852.1 639863 640063 R phage transcriptional regulatory protein/antirepressor Cro complement(639863..640063) Haemophilus parasuis SH0165 7276776 YP_002475227.1 CDS prtR NC_011852.1 640190 640861 D COG:K;COG2932; transcriptional activator-regulator PrtR/CI repressor 640190..640861 Haemophilus parasuis SH0165 7276777 YP_002475228.1 CDS HAPS_0627 NC_011852.1 640942 641790 D hypothetical protein 640942..641790 Haemophilus parasuis SH0165 7276778 YP_002475229.1 CDS HAPS_0628 NC_011852.1 641924 643567 D putative prophage Lp2 protein 4 641924..643567 Haemophilus parasuis SH0165 7276779 YP_002475230.1 CDS dam NC_011852.1 643612 644427 D COG:L;COG0338; site-specific DNA methylase 643612..644427 Haemophilus parasuis SH0165 7276780 YP_002475231.1 CDS HAPS_0630 NC_011852.1 644456 644746 R COG:K;COG3636; putative transcriptional regulator/addiction module antitoxin complement(644456..644746) Haemophilus parasuis SH0165 7276781 YP_002475232.1 CDS HAPS_0631 NC_011852.1 644806 645252 D hypothetical protein 644806..645252 Haemophilus parasuis SH0165 7276782 YP_002475233.1 CDS HAPS_0632 NC_011852.1 645697 645867 R COG:S;COG3422; hypothetical protein complement(645697..645867) Haemophilus parasuis SH0165 7276783 YP_002475234.1 CDS orfG NC_011852.1 645882 646103 D hypothetical protein 645882..646103 Haemophilus parasuis SH0165 7276784 YP_002475235.1 CDS HAPS_0634 NC_011852.1 646083 646259 R hypothetical protein complement(646083..646259) Haemophilus parasuis SH0165 7276785 YP_002475236.1 CDS HAPS_0636 NC_011852.1 646599 647240 D hypothetical protein 646599..647240 Haemophilus parasuis SH0165 7276787 YP_002475237.1 CDS HAPS_0637 NC_011852.1 647314 647535 R hypothetical protein complement(647314..647535) Haemophilus parasuis SH0165 7276788 YP_002475238.1 CDS HAPS_0638 NC_011852.1 647625 647786 D hypothetical protein 647625..647786 Haemophilus parasuis SH0165 7276789 YP_002475239.1 CDS HAPS_0639 NC_011852.1 647757 647945 R hypothetical protein complement(647757..647945) Haemophilus parasuis SH0165 7276790 YP_002475240.1 CDS apaH NC_011852.1 651109 651927 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(651109..651927) Haemophilus parasuis SH0165 7276794 YP_002475241.1 CDS mltB NC_011852.1 651937 653016 R COG:M;COG2951; membrane-bound lytic murein transglycosylase B complement(651937..653016) Haemophilus parasuis SH0165 7276795 YP_002475242.1 CDS truB NC_011852.1 653029 653946 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(653029..653946) Haemophilus parasuis SH0165 7276796 YP_002475243.1 CDS rbfA NC_011852.1 653949 654332 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(653949..654332) Haemophilus parasuis SH0165 7276797 YP_002475244.1 CDS HAPS_0647 NC_011852.1 654375 654494 R hypothetical protein complement(654375..654494) Haemophilus parasuis SH0165 7276798 YP_002475245.1 CDS HAPS_0648 NC_011852.1 654502 657681 R putative serine protease complement(654502..657681) Haemophilus parasuis SH0165 7276799 YP_002475246.1 CDS rplY NC_011852.1 658373 658660 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(658373..658660) Haemophilus parasuis SH0165 7276801 YP_002475247.1 CDS glgP NC_011852.1 658942 661455 D COG:G;COG0058; glycogen phosphorylase 658942..661455 Haemophilus parasuis SH0165 7276802 YP_002475248.1 CDS lysE NC_011852.1 661674 662297 D COG:R;COG1279; lysine exporter protein LysE/YggA 661674..662297 Haemophilus parasuis SH0165 7276803 YP_002475249.1 CDS sucA NC_011852.1 662543 665350 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 662543..665350 Haemophilus parasuis SH0165 7276804 YP_002475250.1 CDS HAPS_0654 NC_011852.1 665386 665499 D hypothetical protein 665386..665499 Haemophilus parasuis SH0165 7276805 YP_002475251.1 CDS sucB NC_011852.1 665515 666732 D COG:C;COG0508; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2) 665515..666732 Haemophilus parasuis SH0165 7276806 YP_002475252.1 CDS sucC NC_011852.1 666797 667963 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 666797..667963 Haemophilus parasuis SH0165 7276807 YP_002475253.1 CDS sucD NC_011852.1 667963 668835 D COG:C;COG0074; succinyl-CoA synthetase alpha chain 667963..668835 Haemophilus parasuis SH0165 7276808 YP_002475254.1 CDS kefBC NC_011852.1 668996 670846 R COG:P;COG0475; glutathione-regulated potassium-efflux system protein complement(668996..670846) Haemophilus parasuis SH0165 7276809 YP_002475255.1 CDS serS NC_011852.1 671041 672345 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(671041..672345) Haemophilus parasuis SH0165 7276810 YP_002475256.1 CDS glyQ NC_011852.1 672421 672780 R COG:S;COG2852; glycyl-tRNA synthetase subunit alpha complement(672421..672780) Haemophilus parasuis SH0165 7276811 YP_002475257.1 CDS smpB NC_011852.1 673049 673525 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(673049..673525) Haemophilus parasuis SH0165 7276812 YP_002475258.1 CDS HAPS_0662 NC_011852.1 673648 675054 R COG:R;COG3106; hypothetical protein complement(673648..675054) Haemophilus parasuis SH0165 7276813 YP_002475259.1 CDS ubiH NC_011852.1 675065 676264 R COG:HC;COG0654; 2-octaprenyl-6-methoxyphenol hydroxylase complement(675065..676264) Haemophilus parasuis SH0165 7276814 YP_002475260.1 CDS selD NC_011852.1 676394 677437 R COG:E;COG0709; selenophosphate synthase complement(676394..677437) Haemophilus parasuis SH0165 7276815 YP_002475261.1 CDS HAPS_0665 NC_011852.1 677540 677764 R COG:S;COG3036; hypothetical protein complement(677540..677764) Haemophilus parasuis SH0165 7276816 YP_002475262.1 CDS HAPS_0666 NC_011852.1 677822 677935 D hypothetical protein 677822..677935 Haemophilus parasuis SH0165 7276817 YP_002475263.1 CDS HAPS_0667 NC_011852.1 677972 678727 D COG:QR;COG0500; putative SAM-dependent methyltransferase 677972..678727 Haemophilus parasuis SH0165 7276818 YP_002475264.1 CDS perM NC_011852.1 678964 680028 D COG:R;COG0628; putative permease, PerM family protein 678964..680028 Haemophilus parasuis SH0165 7276819 YP_002475265.1 CDS queA NC_011852.1 680130 681215 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 680130..681215 Haemophilus parasuis SH0165 7276820 YP_002475266.1 CDS fdhE NC_011852.1 681324 682244 R required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE complement(681324..682244) Haemophilus parasuis SH0165 7276821 YP_002475267.1 CDS mdoB NC_011852.1 682287 684227 R COG:M;COG1368; phosphoglycerol transferase-like protein complement(682287..684227) Haemophilus parasuis SH0165 7276822 YP_002475268.1 CDS ycbX NC_011852.1 684232 685020 R COG:R;COG3217; putative 2Fe-2S cluster-containing protein complement(684232..685020) Haemophilus parasuis SH0165 7276823 YP_002475269.1 CDS xseB NC_011852.1 685122 685346 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 685122..685346 Haemophilus parasuis SH0165 7276824 YP_002475270.1 CDS ispA NC_011852.1 685346 686239 D COG:H;COG0142; geranyltranstransferase 685346..686239 Haemophilus parasuis SH0165 7276825 YP_002475271.1 CDS HAPS_0675 NC_011852.1 686285 687652 R hypothetical protein complement(686285..687652) Haemophilus parasuis SH0165 7276826 YP_002475272.1 CDS fadJ NC_011852.1 687702 689822 R COG:I;COG1250; fatty oxidation complex subunit alpha complement(687702..689822) Haemophilus parasuis SH0165 7276827 YP_002475273.1 CDS fadI NC_011852.1 689827 691131 R COG:I;COG0183; 3-ketoacyl-CoA thiolase complement(689827..691131) Haemophilus parasuis SH0165 7276828 YP_002475274.1 CDS HAPS_0678 NC_011852.1 691243 691944 R COG:S;COG1556; putative conserved iron-sulfur protein complement(691243..691944) Haemophilus parasuis SH0165 7276829 YP_002475275.1 CDS HAPS_0679 NC_011852.1 691949 693355 R COG:C;COG1139; iron-sulfur cluster binding reductase complement(691949..693355) Haemophilus parasuis SH0165 7276830 YP_002475276.1 CDS HAPS_0680 NC_011852.1 693357 694088 R COG:C;COG0247; Fe-S oxidoreductase complement(693357..694088) Haemophilus parasuis SH0165 7276831 YP_002475277.1 CDS lctP NC_011852.1 694300 695895 R COG:C;COG1620; L-lactate permease complement(694300..695895) Haemophilus parasuis SH0165 7276832 YP_002475278.1 CDS folA NC_011852.1 696084 696581 R COG:H;COG0262; dihydrofolate reductase complement(696084..696581) Haemophilus parasuis SH0165 7276833 YP_002475279.1 CDS proB NC_011852.1 696664 697764 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 696664..697764 Haemophilus parasuis SH0165 7276834 YP_002475280.1 CDS HAPS_0684 NC_011852.1 697787 698560 D COG:R;COG0730; putative permease 697787..698560 Haemophilus parasuis SH0165 7276835 YP_002475281.1 CDS nth NC_011852.1 698564 699199 D COG:L;COG0177; endonuclease III 698564..699199 Haemophilus parasuis SH0165 7276836 YP_002475282.1 CDS HAPS_0688 NC_011852.1 703117 703725 R COG:T;COG3103; SH3 domain-containing protein complement(703117..703725) Haemophilus parasuis SH0165 7276839 YP_002475283.1 CDS HAPS_0689 NC_011852.1 703799 705061 R COG:P;COG0306; phosphate permease complement(703799..705061) Haemophilus parasuis SH0165 7276840 YP_002475284.1 CDS HAPS_0690 NC_011852.1 705081 705761 R COG:P;COG1392; phosphate transport regulator complement(705081..705761) Haemophilus parasuis SH0165 7276841 YP_002475285.1 CDS pheS NC_011852.1 706071 707054 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 706071..707054 Haemophilus parasuis SH0165 7276842 YP_002475286.1 CDS pheT NC_011852.1 707227 709614 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 707227..709614 Haemophilus parasuis SH0165 7276843 YP_002475287.1 CDS ihfA NC_011852.1 709631 709927 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 709631..709927 Haemophilus parasuis SH0165 7278616 YP_002475288.1 CDS HAPS_0694 NC_011852.1 709980 710492 D COG:M;COG0791; lipoprotein/cell wall-associated hydrolases (invasion-associated proteins), NLP/P60 protein 709980..710492 Haemophilus parasuis SH0165 7278209 YP_002475289.1 CDS udk NC_011852.1 710680 711333 D COG:F;COG0572; uridine kinase 710680..711333 Haemophilus parasuis SH0165 7278210 YP_002475290.1 CDS dcd NC_011852.1 711350 711934 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 711350..711934 Haemophilus parasuis SH0165 7278211 YP_002475291.1 CDS purF NC_011852.1 712065 713579 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(712065..713579) Haemophilus parasuis SH0165 7278212 YP_002475292.1 CDS cvpA NC_011852.1 713594 714094 R COG:R;COG1286; colicin V production protein complement(713594..714094) Haemophilus parasuis SH0165 7278213 YP_002475293.1 CDS sdhA NC_011852.1 714200 715777 R succinate dehydrogenase/fumarate reductase, flavoprotein subunit complement(714200..715777) Haemophilus parasuis SH0165 7278214 YP_002475294.1 CDS trmU NC_011852.1 715952 716689 R COG:S;COG1496; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase complement(715952..716689) Haemophilus parasuis SH0165 7278215 YP_002475295.1 CDS yjgF NC_011852.1 716693 717082 R COG:J;COG0251; putative translation initiation inhibitor, yjgF family complement(716693..717082) Haemophilus parasuis SH0165 7278216 YP_002475296.1 CDS HAPS_0702 NC_011852.1 717228 717515 D COG:S;COG4453; putative ABC-type transporter 717228..717515 Haemophilus parasuis SH0165 7278217 YP_002475297.1 CDS HAPS_0703 NC_011852.1 717505 718005 D COG:KR;COG0454; GNAT family acetyltransferase 717505..718005 Haemophilus parasuis SH0165 7278218 YP_002475298.1 CDS ndpA NC_011852.1 718033 719034 D COG:R;COG3081; nucleoid-associated protein NdpA 718033..719034 Haemophilus parasuis SH0165 7278219 YP_002475299.1 CDS smpA NC_011852.1 719095 719430 D possibly involved in in maintaining the structural integrity of the cell envelope; COG:J;COG2913; SmpA/OmlA domain-containing protein 719095..719430 Haemophilus parasuis SH0165 7278220 YP_002475300.1 CDS anmK NC_011852.1 719585 720700 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 719585..720700 Haemophilus parasuis SH0165 7278221 YP_002475301.1 CDS murQ NC_011852.1 720712 721626 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 720712..721626 Haemophilus parasuis SH0165 7278222 YP_002475302.1 CDS HAPS_0708 NC_011852.1 721668 721982 D COG:S;COG3098; hypothetical protein 721668..721982 Haemophilus parasuis SH0165 7278223 YP_002475303.1 CDS truC NC_011852.1 721979 722707 D catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C 721979..722707 Haemophilus parasuis SH0165 7278224 YP_002475304.1 CDS HAPS_0710 NC_011852.1 722725 722880 D COG:S;COG3140; hypothetical protein 722725..722880 Haemophilus parasuis SH0165 7278225 YP_002475305.1 CDS HAPS_0711 NC_011852.1 722881 723345 D hypothetical protein 722881..723345 Haemophilus parasuis SH0165 7278226 YP_002475306.1 CDS HAPS_0712 NC_011852.1 723356 723652 R COG:S;COG2914; hypothetical protein complement(723356..723652) Haemophilus parasuis SH0165 7278227 YP_002475307.1 CDS HAPS_0713 NC_011852.1 723642 724076 R COG:I;COG2867; oligoketide cyclase/lipid transport protein complement(723642..724076) Haemophilus parasuis SH0165 7278228 YP_002475308.1 CDS ispF NC_011852.1 724284 724787 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(724284..724787) Haemophilus parasuis SH0165 7278229 YP_002475309.1 CDS ispD NC_011852.1 724792 725472 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(724792..725472) Haemophilus parasuis SH0165 7278230 YP_002475310.1 CDS ftsB NC_011852.1 725472 725753 R COG:D;COG2919; cell division protein FtsB complement(725472..725753) Haemophilus parasuis SH0165 7278231 YP_002475311.1 CDS pckA NC_011852.1 725940 727550 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 725940..727550 Haemophilus parasuis SH0165 7278232 YP_002475312.1 CDS HAPS_0718 NC_011852.1 727815 728645 R COG:S;COG3025; hypothetical protein complement(727815..728645) Haemophilus parasuis SH0165 7278233 YP_002475313.1 CDS rseA NC_011852.1 728852 729481 R COG:T;COG3073; sigma-E factor negative regulatory protein complement(728852..729481) Haemophilus parasuis SH0165 7278234 YP_002475314.1 CDS rpoE NC_011852.1 729509 730078 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(729509..730078) Haemophilus parasuis SH0165 7278235 YP_002475315.1 CDS HAPS_0721 NC_011852.1 730071 730217 R hypothetical protein complement(730071..730217) Haemophilus parasuis SH0165 7278236 YP_002475316.1 CDS hsdM NC_011852.1 730305 731852 D COG:V;COG0286; type I restriction-modification system, M subunit 730305..731852 Haemophilus parasuis SH0165 7278237 YP_002475317.1 CDS hsdS NC_011852.1 732128 733354 D COG:V;COG0732; type I restriction enzyme specificity protein HsdS 732128..733354 Haemophilus parasuis SH0165 7278238 YP_002475318.1 CDS hsdR NC_011852.1 733453 736521 D COG:V;COG0610; type I site-specific restriction-modification system, R (restriction) subunit 733453..736521 Haemophilus parasuis SH0165 7278239 YP_002475319.1 CDS lnt NC_011852.1 736736 738253 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(736736..738253) Haemophilus parasuis SH0165 7278240 YP_002475320.1 CDS corC NC_011852.1 738250 739134 R COG:P;COG4535; magnesium and cobalt efflux protein complement(738250..739134) Haemophilus parasuis SH0165 7278241 YP_002475321.1 CDS HAPS_0727 NC_011852.1 739286 739927 D COG:S;COG3110; hypothetical protein 739286..739927 Haemophilus parasuis SH0165 7278242 YP_002475322.1 CDS dxr NC_011852.1 740823 742013 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(740823..742013) Haemophilus parasuis SH0165 7278244 YP_002475323.1 CDS HAPS_0730 NC_011852.1 742052 742282 R hypothetical protein complement(742052..742282) Haemophilus parasuis SH0165 7278245 YP_002475324.1 CDS HAPS_0731 NC_011852.1 742478 742708 R hypothetical protein complement(742478..742708) Haemophilus parasuis SH0165 7278246 YP_002475325.1 CDS relA NC_011852.1 742721 744928 R COG:TK;COG0317; GTP pyrophosphokinase complement(742721..744928) Haemophilus parasuis SH0165 7278247 YP_002475326.1 CDS hemA NC_011852.1 745202 746509 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 745202..746509 Haemophilus parasuis SH0165 7278248 YP_002475327.1 CDS engA NC_011852.1 746650 748164 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 746650..748164 Haemophilus parasuis SH0165 7278249 YP_002475328.1 CDS rfaE NC_011852.1 748177 749604 D catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 748177..749604 Haemophilus parasuis SH0165 7278250 YP_002475329.1 CDS surA NC_011852.1 749672 750610 D COG:O;COG0760; peptidyl-prolyl cis-trans isomerase SurA 749672..750610 Haemophilus parasuis SH0165 7278251 YP_002475330.1 CDS ksgA NC_011852.1 750709 751569 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 750709..751569 Haemophilus parasuis SH0165 7278252 YP_002475331.1 CDS murA NC_011852.1 752203 753477 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(752203..753477) Haemophilus parasuis SH0165 7278254 YP_002475332.1 CDS bolA NC_011852.1 753501 753758 R COG:K;COG5007; morphology/transcription regulator BolA family protein complement(753501..753758) Haemophilus parasuis SH0165 7278255 YP_002475333.1 CDS rsbV NC_011852.1 753761 754099 R COG:R;COG3113; putative anti-sigma factor B antagonist complement(753761..754099) Haemophilus parasuis SH0165 7278256 YP_002475334.1 CDS HAPS_0742 NC_011852.1 754107 754742 R COG:Q;COG2854; resistance to organic solvents ABC transporter auxiliary component complement(754107..754742) Haemophilus parasuis SH0165 7278257 YP_002475335.1 CDS HAPS_0743 NC_011852.1 754779 755288 R COG:Q;COG1463; resistance to organic solvents ABC transporter periplasmic component complement(754779..755288) Haemophilus parasuis SH0165 7278258 YP_002475336.1 CDS HAPS_0744 NC_011852.1 755361 756134 R COG:Q;COG0767; resistance to organic solvents ABC transporter permease complement(755361..756134) Haemophilus parasuis SH0165 7278259 YP_002475337.1 CDS HAPS_0745 NC_011852.1 756134 756934 R COG:Q;COG1127; ABC transporter ATP-binding protein complement(756134..756934) Haemophilus parasuis SH0165 7278260 YP_002475338.1 CDS HAPS_0746 NC_011852.1 757128 757718 R COG:R;COG2823; hypothetical protein complement(757128..757718) Haemophilus parasuis SH0165 7278261 YP_002475339.1 CDS gmhA NC_011852.1 757739 758329 R COG:G;COG0279; putative phosphoheptose isomerase complement(757739..758329) Haemophilus parasuis SH0165 7278262 YP_002475340.1 CDS HAPS_0748 NC_011852.1 758331 758675 R distantly related to archaeal holliday junction resolvase; COG:L;COG0792; hypothetical protein complement(758331..758675) Haemophilus parasuis SH0165 7278263 YP_002475341.1 CDS lppC NC_011852.1 758677 760413 R COG:R;COG3107; lipoprotein C/GS60 antigen complement(758677..760413) Haemophilus parasuis SH0165 7278264 YP_002475342.1 CDS HAPS_0750 NC_011852.1 760504 761364 D COG:R;COG0313; putative methyltransferase 760504..761364 Haemophilus parasuis SH0165 7278265 YP_002475343.1 CDS dps NC_011852.1 761541 762026 D COG:P;COG0783; ferritin and DNA-binding stress protein 761541..762026 Haemophilus parasuis SH0165 7278266 YP_002475344.1 CDS HAPS_0752 NC_011852.1 762222 763061 R COG:S;COG1801; hypothetical protein complement(762222..763061) Haemophilus parasuis SH0165 7278267 YP_002475345.1 CDS aidA NC_011852.1 763157 765733 R putative pertactin family virulence factor, outer membrane autotransporter/Type V secretory pathway, adhesin AidA complement(763157..765733) Haemophilus parasuis SH0165 7278268 YP_002475346.1 CDS purB NC_011852.1 765959 767326 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 765959..767326 Haemophilus parasuis SH0165 7278269 YP_002475347.1 CDS ldhA NC_011852.1 767477 768424 D Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; glycerate dehydrogenase 767477..768424 Haemophilus parasuis SH0165 7278270 YP_002475348.1 CDS sodC NC_011852.1 768449 768991 D COG:P;COG2032; superoxide dismutase 768449..768991 Haemophilus parasuis SH0165 7278271 YP_002475349.1 CDS lolC NC_011852.1 769077 770258 D COG:M;COG4591; lipoprotein releasing system transmembrane protein/ABC-type transport system, involved in lipoprotein release, permease 769077..770258 Haemophilus parasuis SH0165 7278272 YP_002475350.1 CDS HAPS_0758 NC_011852.1 770251 770907 D COG:S;COG2364; hypothetical protein 770251..770907 Haemophilus parasuis SH0165 7278273 YP_002475351.1 CDS HAPS_0760 NC_011852.1 771662 772174 R putative phage associated protein complement(771662..772174) Haemophilus parasuis SH0165 7278275 YP_002475352.1 CDS engD NC_011852.1 773951 775042 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(773951..775042) Haemophilus parasuis SH0165 7278277 YP_002475353.1 CDS pth NC_011852.1 775101 775685 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(775101..775685) Haemophilus parasuis SH0165 7278278 YP_002475354.1 CDS fimB NC_011852.1 776119 776514 D COG:NU;COG3121; fimbrial assembly chaperone 776119..776514 Haemophilus parasuis SH0165 7278279 YP_002475355.1 CDS HAPS_0766 NC_011852.1 776801 776968 D hypothetical protein 776801..776968 Haemophilus parasuis SH0165 7278281 YP_002475356.1 CDS ilvD NC_011852.1 777648 779483 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(777648..779483) Haemophilus parasuis SH0165 7278283 YP_002475357.1 CDS HAPS_0769 NC_011852.1 779505 779690 D hypothetical protein 779505..779690 Haemophilus parasuis SH0165 7278284 YP_002475358.1 CDS HAPS_0772 NC_011852.1 781598 781756 R hypothetical protein complement(781598..781756) Haemophilus parasuis SH0165 7278287 YP_002475359.1 CDS HAPS_0773 NC_011852.1 781991 782299 R COG:S;COG3514; hypothetical protein complement(781991..782299) Haemophilus parasuis SH0165 7278288 YP_002475360.1 CDS HAPS_0774 NC_011852.1 782274 782552 R COG:S;COG2929; hypothetical protein complement(782274..782552) Haemophilus parasuis SH0165 7278289 YP_002475361.1 CDS HAPS_0775 NC_011852.1 783275 785464 R COG:L;COG5519; putative prophage primase complement(783275..785464) Haemophilus parasuis SH0165 7278290 YP_002475362.1 CDS HAPS_0777 NC_011852.1 785837 786250 R phage small subunit terminase complement(785837..786250) Haemophilus parasuis SH0165 7278292 YP_002475363.1 CDS HAPS_0778 NC_011852.1 786238 786711 R hypothetical protein complement(786238..786711) Haemophilus parasuis SH0165 7278293 YP_002475364.1 CDS HAPS_0779 NC_011852.1 786987 787193 R hypothetical protein complement(786987..787193) Haemophilus parasuis SH0165 7278294 YP_002475365.1 CDS HAPS_0780 NC_011852.1 787184 787531 R hypothetical protein complement(787184..787531) Haemophilus parasuis SH0165 7278295 YP_002475366.1 CDS HAPS_0781 NC_011852.1 787556 787750 R COG:K;COG3311; phage transcriptional regulator complement(787556..787750) Haemophilus parasuis SH0165 7278296 YP_002475367.1 CDS HAPS_0782 NC_011852.1 787955 788764 R hypothetical protein complement(787955..788764) Haemophilus parasuis SH0165 7278297 YP_002475368.1 CDS intA NC_011852.1 788793 790040 R COG:L;COG0582; phage integrase complement(788793..790040) Haemophilus parasuis SH0165 7278298 YP_002475369.1 CDS ubiA NC_011852.1 790480 791352 R catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase complement(790480..791352) Haemophilus parasuis SH0165 7278300 YP_002475370.1 CDS glpR NC_011852.1 791355 792119 R COG:KG;COG1349; glycerol-3-phosphate regulon repressor complement(791355..792119) Haemophilus parasuis SH0165 7278301 YP_002475371.1 CDS kdsA NC_011852.1 792196 793050 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(792196..793050) Haemophilus parasuis SH0165 7278302 YP_002475372.1 CDS HAPS_0788 NC_011852.1 793258 793971 R COG:S;COG2912; hypothetical protein complement(793258..793971) Haemophilus parasuis SH0165 7278303 YP_002475373.1 CDS hemK NC_011852.1 794112 794981 R COG:J;COG2890; HemK-like protein/protein-glutamine N-methyl transferase complement(794112..794981) Haemophilus parasuis SH0165 7278304 YP_002475374.1 CDS HAPS_0790 NC_011852.1 794990 795733 R hypothetical protein complement(794990..795733) Haemophilus parasuis SH0165 7278305 YP_002475375.1 CDS bsp6IM NC_011852.1 795730 796617 R COG:L;COG0270; cytosine specific DNA methyltransferase (BSP6IM) complement(795730..796617) Haemophilus parasuis SH0165 7278306 YP_002475376.1 CDS prfA NC_011852.1 796702 797784 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(796702..797784) Haemophilus parasuis SH0165 7278307 YP_002475377.1 CDS hupA NC_011852.1 797899 798171 R COG:L;COG0776; DNA-binding protein HU/transcriptional regulator complement(797899..798171) Haemophilus parasuis SH0165 7278308 YP_002475378.1 CDS HAPS_0794 NC_011852.1 798303 798899 R COG:S;COG3068; hypothetical protein complement(798303..798899) Haemophilus parasuis SH0165 7278309 YP_002475379.1 CDS hemE NC_011852.1 798909 799835 R COG:H;COG0407; uroporphyrinogen-III decarboxylase complement(798909..799835) Haemophilus parasuis SH0165 7278310 YP_002475380.1 CDS yeaD NC_011852.1 800033 800836 R COG:G;COG0676; aldose 1-epimerase-like protein complement(800033..800836) Haemophilus parasuis SH0165 7278311 YP_002475381.1 CDS argH NC_011852.1 800890 802266 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(800890..802266) Haemophilus parasuis SH0165 7278312 YP_002475382.1 CDS potA NC_011852.1 802675 803787 D functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; putrescine/spermidine ABC transporter ATPase 802675..803787 Haemophilus parasuis SH0165 7278313 YP_002475383.1 CDS potB NC_011852.1 803774 804634 D can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; spermidine/putrescine ABC transporter membrane protein 803774..804634 Haemophilus parasuis SH0165 7278314 YP_002475384.1 CDS potC NC_011852.1 804634 805401 D can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; spermidine/putrescine ABC transporter membrane protein 804634..805401 Haemophilus parasuis SH0165 7278315 YP_002475385.1 CDS hisS NC_011852.1 805697 806956 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 805697..806956 Haemophilus parasuis SH0165 7278316 YP_002475386.1 CDS HAPS_0802 NC_011852.1 806966 807586 D COG:S;COG2976; hypothetical protein 806966..807586 Haemophilus parasuis SH0165 7278317 YP_002475387.1 CDS proC NC_011852.1 807987 808805 D COG:E;COG0345; pyrroline-5-carboxylate reductase 807987..808805 Haemophilus parasuis SH0165 7278318 YP_002475388.1 CDS hcaT NC_011852.1 808802 809950 D putative transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; putative 3-phenylpropionic acid transporter 808802..809950 Haemophilus parasuis SH0165 7278319 YP_002475389.1 CDS HAPS_0806 NC_011852.1 810702 811541 R COG:R;COG2961; protein involved in catabolism of external DNA complement(810702..811541) Haemophilus parasuis SH0165 7278321 YP_002475390.1 CDS ampD NC_011852.1 811599 812165 D COG:V;COG3023; N-acetyl-anhydromuranmyl-L-alanine amidase 811599..812165 Haemophilus parasuis SH0165 7278322 YP_002475391.1 CDS HAPS_0808 NC_011852.1 812158 813066 R COG:S;COG2431; putative membrane protein, surface protein complement(812158..813066) Haemophilus parasuis SH0165 7278323 YP_002475392.1 CDS dinP NC_011852.1 813210 814280 D involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 813210..814280 Haemophilus parasuis SH0165 7278324 YP_002475393.1 CDS htpX NC_011852.1 814386 815237 D putative metalloprotease; heat shock protein HtpX 814386..815237 Haemophilus parasuis SH0165 7278325 YP_002475394.1 CDS uvrC NC_011852.1 815248 817095 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(815248..817095) Haemophilus parasuis SH0165 7278326 YP_002475395.1 CDS pgsA NC_011852.1 817119 817667 R COG:I;COG0558; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(817119..817667) Haemophilus parasuis SH0165 7278327 YP_002475396.1 CDS modB NC_011852.1 817817 818524 D part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 817817..818524 Haemophilus parasuis SH0165 7278328 YP_002475397.1 CDS modC NC_011852.1 818524 819585 D Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 818524..819585 Haemophilus parasuis SH0165 7278329 YP_002475398.1 CDS sodA NC_011852.1 819803 820423 D COG:P;COG0605; manganese superoxide dismutase 819803..820423 Haemophilus parasuis SH0165 7278330 YP_002475399.1 CDS HAPS_0817 NC_011852.1 822127 822273 R hypothetical protein complement(822127..822273) Haemophilus parasuis SH0165 7278332 YP_002475400.1 CDS HAPS_0818 NC_011852.1 822324 822521 R hypothetical protein complement(822324..822521) Haemophilus parasuis SH0165 7278333 YP_002475401.1 CDS HAPS_0819 NC_011852.1 822674 823024 R hypothetical protein complement(822674..823024) Haemophilus parasuis SH0165 7278334 YP_002475402.1 CDS HAPS_0820 NC_011852.1 823040 823813 R COG:S;COG3680; hypothetical protein complement(823040..823813) Haemophilus parasuis SH0165 7278335 YP_002475403.1 CDS HAPS_0821 NC_011852.1 823823 824251 R hypothetical protein complement(823823..824251) Haemophilus parasuis SH0165 7278336 YP_002475404.1 CDS HAPS_0822 NC_011852.1 824376 824765 D COG:K;COG1396; transcriptional regulator/helix-turn-helix domain-containing protein 824376..824765 Haemophilus parasuis SH0165 7278337 YP_002475405.1 CDS intA NC_011852.1 824800 826017 R COG:L;COG0582; CP4-57 prophage, integrase complement(824800..826017) Haemophilus parasuis SH0165 7278338 YP_002475406.1 CDS HAPS_0824 NC_011852.1 826466 826585 D hypothetical protein 826466..826585 Haemophilus parasuis SH0165 7278341 YP_002475407.1 CDS pyrE NC_011852.1 827364 828008 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 827364..828008 Haemophilus parasuis SH0165 7278340 YP_002475408.1 CDS rho NC_011852.1 828462 829661 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(828462..829661) Haemophilus parasuis SH0165 7278342 YP_002475409.1 CDS HAPS_0828 NC_011852.1 829796 829906 D hypothetical protein 829796..829906 Haemophilus parasuis SH0165 7278343 YP_002475410.1 CDS hslR NC_011852.1 829899 830267 D COG:J;COG1188; heat shock-like protein 15 829899..830267 Haemophilus parasuis SH0165 7278344 YP_002475411.1 CDS hslO NC_011852.1 830377 831246 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 830377..831246 Haemophilus parasuis SH0165 7278345 YP_002475412.1 CDS dnaQ NC_011852.1 831317 832087 D COG:L;COG0847; DNA polymerase III subunit epsilon 831317..832087 Haemophilus parasuis SH0165 7278346 YP_002475413.1 CDS gnd NC_011852.1 832372 833826 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(832372..833826) Haemophilus parasuis SH0165 7278348 YP_002475414.1 CDS HAPS_0834 NC_011852.1 834164 834682 R COG:L;COG1943; hypothetical protein complement(834164..834682) Haemophilus parasuis SH0165 7278349 YP_002475415.1 CDS HAPS_0835 NC_011852.1 834734 835093 R COG:S;COG3759; integral membrane protein complement(834734..835093) Haemophilus parasuis SH0165 7278350 YP_002475416.1 CDS HAPS_0836 NC_011852.1 835102 836121 R COG:S;COG4804; hypothetical protein complement(835102..836121) Haemophilus parasuis SH0165 7278351 YP_002475417.1 CDS devB NC_011852.1 836160 836858 R COG:G;COG0363; 6-phosphogluconolactonase complement(836160..836858) Haemophilus parasuis SH0165 7278352 YP_002475418.1 CDS zwf NC_011852.1 836974 838458 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(836974..838458) Haemophilus parasuis SH0165 7278353 YP_002475419.1 CDS cysQ NC_011852.1 838523 839335 R COG:P;COG1218; 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase complement(838523..839335) Haemophilus parasuis SH0165 7278354 YP_002475420.1 CDS prfB NC_011852.1 839917 840663 D COG:J;COG1186; peptide chain release factor 2 839917..840663 Haemophilus parasuis SH0165 7278355 YP_002475421.1 CDS HAPS_0841 NC_011852.1 840753 841586 R COG:QR;COG0500; hypothetical protein complement(840753..841586) Haemophilus parasuis SH0165 7278356 YP_002475422.1 CDS HAPS_0842 NC_011852.1 841838 842935 R COG:L;COG5433; ISAma3, family ISAs1 complement(841838..842935) Haemophilus parasuis SH0165 7278357 YP_002475423.1 CDS comEA NC_011852.1 843620 843961 R COG:L;COG1555; DNA uptake protein complement(843620..843961) Haemophilus parasuis SH0165 7278359 YP_002475424.1 CDS oapA NC_011852.1 844219 845484 D COG:M;COG3061; opacity associated protein A 844219..845484 Haemophilus parasuis SH0165 7278360 YP_002475425.1 CDS oapB NC_011852.1 845544 845942 D opacity associated protein B 845544..845942 Haemophilus parasuis SH0165 7278361 YP_002475426.1 CDS rfaF NC_011852.1 845951 847003 D COG:M;COG0859; ADP-heptose--LPS heptosyltransferase 845951..847003 Haemophilus parasuis SH0165 7278362 YP_002475427.1 CDS acpD NC_011852.1 847099 847686 D COG:I;COG1182; azoreductase/NAD(P)H dehydrogenase (quinone) 847099..847686 Haemophilus parasuis SH0165 7278363 YP_002475428.1 CDS manB NC_011852.1 847857 849515 D COG:G;COG1109; phosphomannomutase 847857..849515 Haemophilus parasuis SH0165 7278364 YP_002475429.1 CDS ftsJ NC_011852.1 849646 850653 D COG:J;COG0566; rRNA methyltransferase 849646..850653 Haemophilus parasuis SH0165 7278365 YP_002475430.1 CDS ispB NC_011852.1 850856 851839 D COG:H;COG0142; octaprenyl-diphosphate synthase 850856..851839 Haemophilus parasuis SH0165 7278366 YP_002475431.1 CDS HAPS_0852 NC_011852.1 852048 852788 D COG:S;COG1636; hypothetical protein 852048..852788 Haemophilus parasuis SH0165 7278367 YP_002475432.1 CDS fabD NC_011852.1 852883 853818 D COG:I;COG0331; malonyl CoA-acyl carrier protein transacylase 852883..853818 Haemophilus parasuis SH0165 7278368 YP_002475433.1 CDS fabG NC_011852.1 853961 854686 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 853961..854686 Haemophilus parasuis SH0165 7278369 YP_002475434.1 CDS HAPS_0855 NC_011852.1 854687 854800 R hypothetical protein complement(854687..854800) Haemophilus parasuis SH0165 7278370 YP_002475435.1 CDS brnQ NC_011852.1 854802 856088 D COG:E;COG1114; branched-chain amino acid permease 854802..856088 Haemophilus parasuis SH0165 7277006 YP_002475436.1 CDS mutM NC_011852.1 856145 856969 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 856145..856969 Haemophilus parasuis SH0165 7277008 YP_002475437.1 CDS HAPS_0859 NC_011852.1 857594 857962 R COG:S;COG5566; bacteriophage transcriptional regulator complement(857594..857962) Haemophilus parasuis SH0165 7277010 YP_002475438.1 CDS HAPS_0860 NC_011852.1 857964 858362 R COG:S;COG4382; Mu-like phage E16 protein complement(857964..858362) Haemophilus parasuis SH0165 7277011 YP_002475439.1 CDS HAPS_0862 NC_011852.1 858525 858683 R hypothetical protein complement(858525..858683) Haemophilus parasuis SH0165 7277013 YP_002475440.1 CDS HAPS_0863 NC_011852.1 858683 858895 R hypothetical protein complement(858683..858895) Haemophilus parasuis SH0165 7277014 YP_002475441.1 CDS gam NC_011852.1 858892 859416 R COG:R;COG4396; host-nuclease inhibitor protein complement(858892..859416) Haemophilus parasuis SH0165 7277015 YP_002475442.1 CDS HAPS_0865 NC_011852.1 859409 859627 R hypothetical protein complement(859409..859627) Haemophilus parasuis SH0165 7277016 YP_002475443.1 CDS exeA NC_011852.1 859620 860774 R COG:U;COG3267; ExeA protein, phage-like protein complement(859620..860774) Haemophilus parasuis SH0165 7277017 YP_002475444.1 CDS HAPS_0867 NC_011852.1 860817 862427 R putative phage associated protein complement(860817..862427) Haemophilus parasuis SH0165 7277018 YP_002475445.1 CDS HAPS_0868 NC_011852.1 862630 863520 R putative phage associated protein complement(862630..863520) Haemophilus parasuis SH0165 7277019 YP_002475446.1 CDS HAPS_0869 NC_011852.1 863549 863851 R putative phage-like DNA-binding protein complement(863549..863851) Haemophilus parasuis SH0165 7277020 YP_002475447.1 CDS HAPS_0870 NC_011852.1 863848 863991 R hypothetical protein complement(863848..863991) Haemophilus parasuis SH0165 7277021 YP_002475448.1 CDS HAPS_0871 NC_011852.1 864047 864295 D hypothetical protein 864047..864295 Haemophilus parasuis SH0165 7277022 YP_002475449.1 CDS HAPS_0872 NC_011852.1 864488 864721 R putative phage associated protein complement(864488..864721) Haemophilus parasuis SH0165 7277023 YP_002475450.1 CDS HAPS_0873 NC_011852.1 864785 865084 D hypothetical protein 864785..865084 Haemophilus parasuis SH0165 7277024 YP_002475451.1 CDS HAPS_0874 NC_011852.1 865409 865639 D hypothetical protein 865409..865639 Haemophilus parasuis SH0165 7277025 YP_002475452.1 CDS HAPS_0875 NC_011852.1 865687 866658 D phage protein 865687..866658 Haemophilus parasuis SH0165 7277026 YP_002475453.1 CDS HAPS_0876 NC_011852.1 866658 867836 D putative phage-like membrane protein 866658..867836 Haemophilus parasuis SH0165 7277027 YP_002475454.1 CDS HAPS_0877 NC_011852.1 867930 868451 D COG:R;COG3926; hypothetical bacteriophage protein 867930..868451 Haemophilus parasuis SH0165 7277028 YP_002475455.1 CDS HAPS_0878 NC_011852.1 868552 868785 D hypothetical protein 868552..868785 Haemophilus parasuis SH0165 7277029 YP_002475456.1 CDS HAPS_0879 NC_011852.1 868782 869135 D hypothetical protein 868782..869135 Haemophilus parasuis SH0165 7277030 YP_002475457.1 CDS HAPS_0880 NC_011852.1 869160 869489 D Mu-like phage gp25 869160..869489 Haemophilus parasuis SH0165 7277031 YP_002475458.1 CDS HAPS_0881 NC_011852.1 869493 869783 D hypothetical bacteriophage protein 869493..869783 Haemophilus parasuis SH0165 7277032 YP_002475459.1 CDS HAPS_0882 NC_011852.1 869817 870389 D Mu-like phage gp27 869817..870389 Haemophilus parasuis SH0165 7277033 YP_002475460.1 CDS HAPS_0883 NC_011852.1 870451 871686 D COG:R;COG4373; prophage MuMc02, terminase, ATPase subunit /putative DNA packaging protein Gp17 870451..871686 Haemophilus parasuis SH0165 7277034 YP_002475461.1 CDS HAPS_0884 NC_011852.1 871690 873108 D putative phage-like protein 871690..873108 Haemophilus parasuis SH0165 7277035 YP_002475462.1 CDS HAPS_0885 NC_011852.1 873105 874373 D Mu GP30-like protein/phage putative head morphogenesis protein, SPP1 gp7 873105..874373 Haemophilus parasuis SH0165 7277036 YP_002475463.1 CDS HAPS_0886 NC_011852.1 874500 874955 D bacteriophage Mu G-like protein/virion morphogenesis protein 874500..874955 Haemophilus parasuis SH0165 7277037 YP_002475464.1 CDS HAPS_0887 NC_011852.1 875176 876282 D hypothetical bacteriophage protein 875176..876282 Haemophilus parasuis SH0165 7277038 YP_002475465.1 CDS HAPS_0888 NC_011852.1 876318 877259 D hypothetical bacteriophage protein 876318..877259 Haemophilus parasuis SH0165 7277039 YP_002475466.1 CDS HAPS_0889 NC_011852.1 877326 877769 D Erp22-like protein 877326..877769 Haemophilus parasuis SH0165 7277040 YP_002475467.1 CDS HAPS_0890 NC_011852.1 877772 878209 D hypothetical bacteriophage protein 877772..878209 Haemophilus parasuis SH0165 7277041 YP_002475468.1 CDS HAPS_0891 NC_011852.1 878209 878709 D hypothetical bacteriophage protein 878209..878709 Haemophilus parasuis SH0165 7277042 YP_002475469.1 CDS HAPS_0892 NC_011852.1 878719 880113 D COG:R;COG3497; bacteriophage tail sheath protein 878719..880113 Haemophilus parasuis SH0165 7277043 YP_002475470.1 CDS HAPS_0893 NC_011852.1 880113 880631 D COG:R;COG3498; tail core-like protein 880113..880631 Haemophilus parasuis SH0165 7277044 YP_002475471.1 CDS HAPS_0894 NC_011852.1 881196 881540 D putative phage anti-repressor protein 881196..881540 Haemophilus parasuis SH0165 7277045 YP_002475472.1 CDS HAPS_0895 NC_011852.1 881545 881805 D hypothetical protein 881545..881805 Haemophilus parasuis SH0165 7277046 YP_002475473.1 CDS HAPS_0896 NC_011852.1 881885 882172 D hypothetical protein 881885..882172 Haemophilus parasuis SH0165 7277047 YP_002475474.1 CDS HAPS_0897 NC_011852.1 882147 882302 D hypothetical protein 882147..882302 Haemophilus parasuis SH0165 7277048 YP_002475475.1 CDS HAPS_0898 NC_011852.1 882287 882571 R hypothetical protein complement(882287..882571) Haemophilus parasuis SH0165 7277049 YP_002475476.1 CDS HAPS_0899 NC_011852.1 882615 885293 D putative bacteriophage tail protein/phage tail tape measure protein, TP901 family 882615..885293 Haemophilus parasuis SH0165 7277050 YP_002475477.1 CDS HAPS_0900 NC_011852.1 885293 886234 D putative bacteriophage V tail protein 885293..886234 Haemophilus parasuis SH0165 7277051 YP_002475478.1 CDS HAPS_0901 NC_011852.1 886227 886445 D phage tail fiber-like protein 886227..886445 Haemophilus parasuis SH0165 7277052 YP_002475479.1 CDS HAPS_0902 NC_011852.1 886449 887501 D COG:R;COG3500; putative bacteriophage regulatory protein 886449..887501 Haemophilus parasuis SH0165 7277053 YP_002475480.1 CDS HAPS_0903 NC_011852.1 887516 888100 D COG:R;COG4540; putative bacteriophage baseplate protein 887516..888100 Haemophilus parasuis SH0165 7277054 YP_002475481.1 CDS HAPS_0904 NC_011852.1 888158 888526 D COG:R;COG3628; phage baseplate-like protein 888158..888526 Haemophilus parasuis SH0165 7277055 YP_002475482.1 CDS HAPS_0905 NC_011852.1 888513 889628 D COG:R;COG3948; phage baseplate-like protein 888513..889628 Haemophilus parasuis SH0165 7277056 YP_002475483.1 CDS HAPS_0906 NC_011852.1 889621 890187 D putative bacteriophage tail fiber protein 889621..890187 Haemophilus parasuis SH0165 7277057 YP_002475484.1 CDS HAPS_0907 NC_011852.1 890211 892127 D putative phage-like tail fiber protein 890211..892127 Haemophilus parasuis SH0165 7277058 YP_002475485.1 CDS HAPS_0908 NC_011852.1 892137 892703 D putative tail fiber assembly protein 892137..892703 Haemophilus parasuis SH0165 7277059 YP_002475486.1 CDS HAPS_0909 NC_011852.1 892696 893175 D enoyl-CoA hydratase/carnithine racemase-like protein 892696..893175 Haemophilus parasuis SH0165 7277060 YP_002475487.1 CDS HAPS_0910 NC_011852.1 893489 896413 D phage-like protein, tail component 893489..896413 Haemophilus parasuis SH0165 7277061 YP_002475488.1 CDS HAPS_0911 NC_011852.1 896442 897233 D antimicrobial peptide ABC transporter ATPase 896442..897233 Haemophilus parasuis SH0165 7277062 YP_002475489.1 CDS znuA NC_011852.1 897573 898529 R involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic protein complement(897573..898529) Haemophilus parasuis SH0165 7277064 YP_002475490.1 CDS pssA NC_011852.1 898667 900034 R catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase complement(898667..900034) Haemophilus parasuis SH0165 7277065 YP_002475491.1 CDS HAPS_0915 NC_011852.1 900227 900442 D hypothetical protein 900227..900442 Haemophilus parasuis SH0165 7277066 YP_002475492.1 CDS ileS NC_011852.1 900540 903356 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(900540..903356) Haemophilus parasuis SH0165 7277067 YP_002475493.1 CDS HAPS_0917 NC_011852.1 903416 904078 R antitoxin/toxin system zeta toxin, signal recognition particle GTPase complement(903416..904078) Haemophilus parasuis SH0165 7277068 YP_002475494.1 CDS HAPS_0918 NC_011852.1 904082 904363 R hypothetical protein complement(904082..904363) Haemophilus parasuis SH0165 7277069 YP_002475495.1 CDS ribF NC_011852.1 904365 905342 R COG:H;COG0196; riboflavin biosynthesis protein complement(904365..905342) Haemophilus parasuis SH0165 7277070 YP_002475496.1 CDS purM NC_011852.1 905501 906535 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 905501..906535 Haemophilus parasuis SH0165 7277071 YP_002475497.1 CDS HAPS_0921 NC_011852.1 906890 908578 R hypothetical protein complement(906890..908578) Haemophilus parasuis SH0165 7277072 YP_002475498.1 CDS HAPS_0922 NC_011852.1 908643 908810 R hypothetical protein complement(908643..908810) Haemophilus parasuis SH0165 7277073 YP_002475499.1 CDS HAPS_0923 NC_011852.1 908983 909573 R hypothetical protein complement(908983..909573) Haemophilus parasuis SH0165 7277074 YP_002475500.1 CDS HAPS_0924 NC_011852.1 909702 910673 D COG:L;COG3547; ISNme5, family110 909702..910673 Haemophilus parasuis SH0165 7277075 YP_002475501.1 CDS HAPS_0925 NC_011852.1 910664 910786 R hypothetical protein complement(910664..910786) Haemophilus parasuis SH0165 7277221 YP_002475502.1 CDS HAPS_0926 NC_011852.1 910945 911724 R COG:R;COG4105; DNA uptake lipoprotein, TPR repeat-containing protein complement(910945..911724) Haemophilus parasuis SH0165 7277799 YP_002475503.1 CDS rluD NC_011852.1 911861 912838 D responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase D 911861..912838 Haemophilus parasuis SH0165 7277800 YP_002475504.1 CDS bolA NC_011852.1 913158 913469 R COG:T;COG0271; stress-induced morphogen complement(913158..913469) Haemophilus parasuis SH0165 7277802 YP_002475505.1 CDS pflA NC_011852.1 913553 914140 D COG:M;COG3056; pyruvate formate lyase-activating enzyme 1 lipoprotein 913553..914140 Haemophilus parasuis SH0165 7277803 YP_002475506.1 CDS HAPS_0931 NC_011852.1 914377 915111 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 914377..915111 Haemophilus parasuis SH0165 7277804 YP_002475507.1 CDS HAPS_0932 NC_011852.1 915112 915669 D COG:K;COG1678; hypothetical protein 915112..915669 Haemophilus parasuis SH0165 7277805 YP_002475508.1 CDS rusA NC_011852.1 915669 916085 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 915669..916085 Haemophilus parasuis SH0165 7277806 YP_002475509.1 CDS dgt NC_011852.1 916104 917414 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(916104..917414) Haemophilus parasuis SH0165 7277807 YP_002475510.1 CDS rumA NC_011852.1 917496 918806 D in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 917496..918806 Haemophilus parasuis SH0165 7277808 YP_002475511.1 CDS dppA NC_011852.1 919085 920680 D COG:E;COG0747; periplasmic dipeptide transport protein DppA 919085..920680 Haemophilus parasuis SH0165 7277809 YP_002475512.1 CDS dppB NC_011852.1 920774 921778 D COG:EP;COG0601; dipeptide transport system permease DppB 920774..921778 Haemophilus parasuis SH0165 7277810 YP_002475513.1 CDS dppC NC_011852.1 921807 922700 D COG:EP;COG1173; dipeptide transport system permease DppC 921807..922700 Haemophilus parasuis SH0165 7277811 YP_002475514.1 CDS dppD NC_011852.1 922711 923694 D DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit 922711..923694 Haemophilus parasuis SH0165 7277812 YP_002475515.1 CDS dppF NC_011852.1 923709 924689 D Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 923709..924689 Haemophilus parasuis SH0165 7277813 YP_002475516.1 CDS ruvC NC_011852.1 924741 925319 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(924741..925319) Haemophilus parasuis SH0165 7277814 YP_002475517.1 CDS uvrA NC_011852.1 925393 925881 R excinuclease ABC subunit A complement(925393..925881) Haemophilus parasuis SH0165 7277815 YP_002475518.1 CDS aspS NC_011852.1 925999 926739 R COG:S;COG0217; hypothetical protein complement(925999..926739) Haemophilus parasuis SH0165 7277816 YP_002475519.1 CDS ntpA NC_011852.1 926878 927327 R COG:LR;COG0494; dATP pyrophosphohydrolase complement(926878..927327) Haemophilus parasuis SH0165 7277817 YP_002475520.1 CDS HAPS_0945 NC_011852.1 927733 928371 D hypothetical protein 927733..928371 Haemophilus parasuis SH0165 7277818 YP_002475521.1 CDS folP NC_011852.1 928597 929376 D COG:H;COG0294; dihydropteroate synthase 928597..929376 Haemophilus parasuis SH0165 7277819 YP_002475522.1 CDS arsC NC_011852.1 929391 929738 D COG:P;COG1393; arsenate reductase 929391..929738 Haemophilus parasuis SH0165 7277820 YP_002475523.1 CDS coaE NC_011852.1 929824 930444 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 929824..930444 Haemophilus parasuis SH0165 7277821 YP_002475524.1 CDS yacG NC_011852.1 930448 930642 D COG:S;COG3024; putative zinc-binding protein 930448..930642 Haemophilus parasuis SH0165 7277822 YP_002475525.1 CDS holA NC_011852.1 930639 931661 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(930639..931661) Haemophilus parasuis SH0165 7277823 YP_002475526.1 CDS rlpB NC_011852.1 931666 932160 R COG:M;COG2980; rare lipoprotein B complement(931666..932160) Haemophilus parasuis SH0165 7277824 YP_002475527.1 CDS leuS NC_011852.1 932243 934831 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(932243..934831) Haemophilus parasuis SH0165 7277825 YP_002475528.1 CDS HAPS_0953 NC_011852.1 935071 935346 D COG:K;COG1396; transcriptional regulator 935071..935346 Haemophilus parasuis SH0165 7277826 YP_002475529.1 CDS thrS NC_011852.1 935536 937467 D catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 935536..937467 Haemophilus parasuis SH0165 7277827 YP_002475530.1 CDS HAPS_0955 NC_011852.1 937712 937867 D hypothetical protein 937712..937867 Haemophilus parasuis SH0165 7277828 YP_002475531.1 CDS HAPS_0957 NC_011852.1 941857 943248 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(941857..943248) Haemophilus parasuis SH0165 7277830 YP_002475532.1 CDS crr NC_011852.1 943439 943942 R functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter complement(943439..943942) Haemophilus parasuis SH0165 7277831 YP_002475533.1 CDS ptsI NC_011852.1 944016 945737 R Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase complement(944016..945737) Haemophilus parasuis SH0165 7277832 YP_002475534.1 CDS ptsH NC_011852.1 945833 946090 R COG:G;COG1925; phosphotransferase system, phosphocarrier protein HPr complement(945833..946090) Haemophilus parasuis SH0165 7277833 YP_002475535.1 CDS asd NC_011852.1 946395 947510 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 946395..947510 Haemophilus parasuis SH0165 7277834 YP_002475536.1 CDS HAPS_0962 NC_011852.1 947540 947680 R hypothetical protein complement(947540..947680) Haemophilus parasuis SH0165 7277835 YP_002475537.1 CDS HAPS_0963 NC_011852.1 947885 949492 D hypothetical protein 947885..949492 Haemophilus parasuis SH0165 7277836 YP_002475538.1 CDS lpxB NC_011852.1 950343 951506 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 950343..951506 Haemophilus parasuis SH0165 7277838 YP_002475539.1 CDS secF NC_011852.1 951539 952510 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(951539..952510) Haemophilus parasuis SH0165 7277839 YP_002475540.1 CDS secD NC_011852.1 952521 954332 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(952521..954332) Haemophilus parasuis SH0165 7277840 YP_002475541.1 CDS yajC NC_011852.1 954394 954687 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(954394..954687) Haemophilus parasuis SH0165 7277841 YP_002475542.1 CDS HAPS_0969 NC_011852.1 954893 955453 D COG:R;COG3054; putative transcriptional regulator 954893..955453 Haemophilus parasuis SH0165 7277842 YP_002475543.1 CDS argG NC_011852.1 955541 956872 R catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase complement(955541..956872) Haemophilus parasuis SH0165 7277843 YP_002475544.1 CDS gpmA NC_011852.1 957062 957745 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(957062..957745) Haemophilus parasuis SH0165 7277844 YP_002475545.1 CDS kdsB NC_011852.1 957905 958672 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(957905..958672) Haemophilus parasuis SH0165 7277845 YP_002475546.1 CDS HAPS_0973 NC_011852.1 958681 959247 R COG:S;COG3101; hypothetical protein complement(958681..959247) Haemophilus parasuis SH0165 7277846 YP_002475547.1 CDS HAPS_0974 NC_011852.1 959256 959819 R COG:C;COG0778; nitroreductase complement(959256..959819) Haemophilus parasuis SH0165 7277847 YP_002475548.1 CDS tktA NC_011852.1 960216 962222 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 960216..962222 Haemophilus parasuis SH0165 7277848 YP_002475549.1 CDS waaQ NC_011852.1 962296 963336 D COG:M;COG0859; ADP-heptose--lipooligosaccharide heptosyltransferase III/heptosyltransferase-like protein 962296..963336 Haemophilus parasuis SH0165 7277849 YP_002475550.1 CDS HAPS_0977 NC_011852.1 963441 963869 D COG:S;COG3787; hypothetical protein 963441..963869 Haemophilus parasuis SH0165 7277850 YP_002475551.1 CDS rfbB NC_011852.1 963987 964991 D COG:M;COG1088; dTDP-glucose 4,6-dehydratase 963987..964991 Haemophilus parasuis SH0165 7277851 YP_002475552.1 CDS HAPS_0979 NC_011852.1 965135 966013 R COG:R;COG1090; hypothetical protein complement(965135..966013) Haemophilus parasuis SH0165 7277852 YP_002475553.1 CDS argR NC_011852.1 966013 966474 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(966013..966474) Haemophilus parasuis SH0165 7277853 YP_002475554.1 CDS mdh NC_011852.1 966676 967620 D oxidizes malate to oxaloacetate; malate dehydrogenase 966676..967620 Haemophilus parasuis SH0165 7277854 YP_002475555.1 CDS HAPS_0982 NC_011852.1 967709 968557 D COG:O;COG3118; thioredoxin-like protein 967709..968557 Haemophilus parasuis SH0165 7277855 YP_002475556.1 CDS trxB NC_011852.1 968596 969546 D COG:O;COG0492; thioredoxin reductase 968596..969546 Haemophilus parasuis SH0165 7277856 YP_002475557.1 CDS igtF NC_011852.1 969758 970516 R COG:M;COG0463; UDP-glucose-- lipooligosaccharideglucosyltransferase involved in cell wall biogenesis complement(969758..970516) Haemophilus parasuis SH0165 7277857 YP_002475558.1 CDS rrmJ NC_011852.1 970636 970950 D COG:J;COG1534; 23S rRNA methyltransferase J 970636..970950 Haemophilus parasuis SH0165 7277858 YP_002475559.1 CDS HAPS_0991 NC_011852.1 979103 979294 D hypothetical protein 979103..979294 Haemophilus parasuis SH0165 7277864 YP_002475560.1 CDS cyaA NC_011852.1 979637 982108 D catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 979637..982108 Haemophilus parasuis SH0165 7277866 YP_002475561.1 CDS kefB NC_011852.1 982123 984057 D COG:P;COG0475; glutathione-regulated potassium-efflux system protein 982123..984057 Haemophilus parasuis SH0165 7277867 YP_002475562.1 CDS ruvB NC_011852.1 984212 985138 D COG:L;COG2255; holliday junction DNA helicase B 984212..985138 Haemophilus parasuis SH0165 7277868 YP_002475563.1 CDS oppA NC_011852.1 985321 986958 D COG:E;COG4166; oligopeptide permease ABC transporter membrane protein 985321..986958 Haemophilus parasuis SH0165 7277869 YP_002475564.1 CDS oppB NC_011852.1 987053 987976 D COG:EP;COG0601; oligopeptide ABC transporter periplasmic protein 987053..987976 Haemophilus parasuis SH0165 7277870 YP_002475565.1 CDS oppC NC_011852.1 987987 988907 D COG:EP;COG1173; oligopeptide ABC transporter permease 987987..988907 Haemophilus parasuis SH0165 7277871 YP_002475566.1 CDS oppD NC_011852.1 988919 990514 D COG:R;COG4172; ABC transporter ATP-binding protein 988919..990514 Haemophilus parasuis SH0165 7277872 YP_002475567.1 CDS oppF NC_011852.1 990582 992582 R Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase complement(990582..992582) Haemophilus parasuis SH0165 7277873 YP_002475568.1 CDS malT NC_011852.1 992834 995551 D COG:K;COG2909; ATP-dependent transcriptional regulator 992834..995551 Haemophilus parasuis SH0165 7277874 YP_002475569.1 CDS HAPS_1002 NC_011852.1 995757 996068 D highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein 995757..996068 Haemophilus parasuis SH0165 7277875 YP_002475570.1 CDS hemY NC_011852.1 996178 997428 R COG:H;COG3071; porphoryin biosynthesis protein HemY complement(996178..997428) Haemophilus parasuis SH0165 7277876 YP_002475571.1 CDS hemX NC_011852.1 997439 998800 R COG:H;COG2959; putative uroporphyrin-III C-methyltransferase complement(997439..998800) Haemophilus parasuis SH0165 7277877 YP_002475572.1 CDS hemD NC_011852.1 998818 999576 R COG:H;COG1587; uroporphyrinogen-III synthase complement(998818..999576) Haemophilus parasuis SH0165 7277878 YP_002475573.1 CDS hemC NC_011852.1 999578 1000507 R COG:H;COG0181; porphobilinogen deaminase complement(999578..1000507) Haemophilus parasuis SH0165 7277879 YP_002475574.1 CDS alsT NC_011852.1 1000974 1002362 D COG:E;COG1115; Na+/alanine symporter 1000974..1002362 Haemophilus parasuis SH0165 7277880 YP_002475575.1 CDS ptsB NC_011852.1 1002436 1003857 R COG:G;COG1263; PTS system sucrose-specific transporter subunit IIBC complement(1002436..1003857) Haemophilus parasuis SH0165 7277222 YP_002475576.1 CDS ptrA NC_011852.1 1004173 1007115 D COG:O;COG1025; protease III 1004173..1007115 Haemophilus parasuis SH0165 7277077 YP_002475577.1 CDS HAPS_1010 NC_011852.1 1007261 1007890 R HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein complement(1007261..1007890) Haemophilus parasuis SH0165 7277078 YP_002475578.1 CDS lon NC_011852.1 1008035 1010437 D COG:O;COG0466; ATP-dependent protease LA 1008035..1010437 Haemophilus parasuis SH0165 7277079 YP_002475579.1 CDS rumB NC_011852.1 1010635 1011804 R RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase complement(1010635..1011804) Haemophilus parasuis SH0165 7277080 YP_002475580.1 CDS nagZ NC_011852.1 1011797 1012819 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(1011797..1012819) Haemophilus parasuis SH0165 7277081 YP_002475581.1 CDS HAPS_1014 NC_011852.1 1012841 1014640 R COG:KL;COG1199; putative ATP-dependent helicase complement(1012841..1014640) Haemophilus parasuis SH0165 7277082 YP_002475582.1 CDS upp NC_011852.1 1014865 1015491 R COG:F;COG0035; uracil phosphoribosyltransferase complement(1014865..1015491) Haemophilus parasuis SH0165 7277083 YP_002475583.1 CDS ilvY NC_011852.1 1015553 1016362 R participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY complement(1015553..1016362) Haemophilus parasuis SH0165 7277084 YP_002475584.1 CDS lbgB NC_011852.1 1016447 1017481 R COG:M;COG0859; lipooligosaccharide D-glycero-D-manno-heptosyltransferase complement(1016447..1017481) Haemophilus parasuis SH0165 7277085 YP_002475585.1 CDS HAPS_1018 NC_011852.1 1017478 1017645 R hypothetical protein complement(1017478..1017645) Haemophilus parasuis SH0165 7277086 YP_002475586.1 CDS HAPS_1019 NC_011852.1 1017621 1018556 R ADP-heptose--LPS heptosyltransferase complement(1017621..1018556) Haemophilus parasuis SH0165 7277087 YP_002475587.1 CDS lbgA NC_011852.1 1018583 1019257 R COG:M;COG3306; lipooligosaccharide galactosyltransferase I complement(1018583..1019257) Haemophilus parasuis SH0165 7277088 YP_002475588.1 CDS HAPS_1021 NC_011852.1 1019260 1020405 R group 1 glycosyl transferase complement(1019260..1020405) Haemophilus parasuis SH0165 7277089 YP_002475589.1 CDS HAPS_1022 NC_011852.1 1020395 1021567 R COG:M;COG0438; group 1 glycosyl transferase complement(1020395..1021567) Haemophilus parasuis SH0165 7277090 YP_002475590.1 CDS lpsA NC_011852.1 1021571 1022362 R COG:M;COG3306; lipooligosaccharide biosynthesis protein lpsA complement(1021571..1022362) Haemophilus parasuis SH0165 7277091 YP_002475591.1 CDS HAPS_1024 NC_011852.1 1022586 1022963 R hypothetical protein complement(1022586..1022963) Haemophilus parasuis SH0165 7277092 YP_002475592.1 CDS HAPS_1025 NC_011852.1 1022960 1023106 R hypothetical protein complement(1022960..1023106) Haemophilus parasuis SH0165 7277093 YP_002475593.1 CDS rpmE NC_011852.1 1023216 1023428 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(1023216..1023428) Haemophilus parasuis SH0165 7277094 YP_002475594.1 CDS HAPS_1027 NC_011852.1 1023687 1024784 D COG:L;COG5433; ISAma3, family ISAs1 1023687..1024784 Haemophilus parasuis SH0165 7277095 YP_002475595.1 CDS genX NC_011852.1 1024982 1025887 D lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 1024982..1025887 Haemophilus parasuis SH0165 7277096 YP_002475596.1 CDS tatD NC_011852.1 1025997 1026779 D COG:L;COG0084; putative Mg-dependent DNAse 1025997..1026779 Haemophilus parasuis SH0165 7277097 YP_002475597.1 CDS HAPS_1030 NC_011852.1 1026919 1027344 D hypothetical protein 1026919..1027344 Haemophilus parasuis SH0165 7277098 YP_002475598.1 CDS lpxH NC_011852.1 1027450 1028178 D COG:S;COG2908; UDP-2,3-diacylglucosamine hydrolase 1027450..1028178 Haemophilus parasuis SH0165 7277099 YP_002475599.1 CDS vimF NC_011852.1 1028179 1028979 D COG:M;COG0463; cell wall biosynthesis glycosyltransferase 1028179..1028979 Haemophilus parasuis SH0165 7277100 YP_002475600.1 CDS spoT NC_011852.1 1028987 1030945 R COG:TK;COG0317; guanosine polyphosphate pyrophosphohydrolase/synthetase complement(1028987..1030945) Haemophilus parasuis SH0165 7277101 YP_002475601.1 CDS HAPS_1034 NC_011852.1 1031134 1031247 D hypothetical protein 1031134..1031247 Haemophilus parasuis SH0165 7277102 YP_002475602.1 CDS rpoZ NC_011852.1 1031210 1031491 R promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(1031210..1031491) Haemophilus parasuis SH0165 7277103 YP_002475603.1 CDS talB NC_011852.1 1031853 1032803 R COG:G;COG0176; transaldolase B complement(1031853..1032803) Haemophilus parasuis SH0165 7277104 YP_002475604.1 CDS ampG NC_011852.1 1032918 1034189 R COG:GEPR;COG0477; permease complement(1032918..1034189) Haemophilus parasuis SH0165 7277105 YP_002475605.1 CDS galE NC_011852.1 1034192 1035208 R COG:M;COG1087; UDP-glucose-4-epimerase complement(1034192..1035208) Haemophilus parasuis SH0165 7277106 YP_002475606.1 CDS rluB NC_011852.1 1035273 1035935 R COG:J;COG1187; pseudouridylate synthase complement(1035273..1035935) Haemophilus parasuis SH0165 7277107 YP_002475607.1 CDS HAPS_1040 NC_011852.1 1036098 1036427 D COG:S;COG0718; hypothetical protein 1036098..1036427 Haemophilus parasuis SH0165 7277108 YP_002475608.1 CDS recR NC_011852.1 1036494 1037099 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1036494..1037099 Haemophilus parasuis SH0165 7277109 YP_002475609.1 CDS pyrG NC_011852.1 1037210 1038844 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1037210..1038844 Haemophilus parasuis SH0165 7277110 YP_002475610.1 CDS serA NC_011852.1 1038956 1040188 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(1038956..1040188) Haemophilus parasuis SH0165 7277111 YP_002475611.1 CDS rpiA NC_011852.1 1040251 1040910 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(1040251..1040910) Haemophilus parasuis SH0165 7277112 YP_002475612.1 CDS glmM NC_011852.1 1041009 1042343 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(1041009..1042343) Haemophilus parasuis SH0165 7277113 YP_002475613.1 CDS ilvA NC_011852.1 1042350 1043876 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(1042350..1043876) Haemophilus parasuis SH0165 7277114 YP_002475614.1 CDS slyD NC_011852.1 1043895 1044461 R COG:O;COG1047; FkbP-type peptidyl-prolyl cis-trans isomerase complement(1043895..1044461) Haemophilus parasuis SH0165 7277115 YP_002475615.1 CDS HAPS_1048 NC_011852.1 1044579 1044719 R hypothetical protein complement(1044579..1044719) Haemophilus parasuis SH0165 7277116 YP_002475616.1 CDS HAPS_1049 NC_011852.1 1044728 1045432 R COG:S;COG3471; periplasmic/secreted protein complement(1044728..1045432) Haemophilus parasuis SH0165 7277117 YP_002475617.1 CDS HAPS_1050 NC_011852.1 1045484 1046221 R COG:S;COG1720; potassium-tellurite ethidium and proflavin transporter complement(1045484..1046221) Haemophilus parasuis SH0165 7277118 YP_002475618.1 CDS menA NC_011852.1 1046341 1047231 D catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1046341..1047231 Haemophilus parasuis SH0165 7277119 YP_002475619.1 CDS HAPS_1052 NC_011852.1 1047266 1047427 R COG:S;COG2835; hypothetical protein complement(1047266..1047427) Haemophilus parasuis SH0165 7277120 YP_002475620.1 CDS lpxK NC_011852.1 1047408 1048430 R transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(1047408..1048430) Haemophilus parasuis SH0165 7277121 YP_002475621.1 CDS hugX NC_011852.1 1049117 1049512 D COG:P;COG3721; heme utilization protein HuvX 1049117..1049512 Haemophilus parasuis SH0165 7277122 YP_002475622.1 CDS hugZ NC_011852.1 1049526 1050065 D COG:P;COG0748; heme utilization protein 1049526..1050065 Haemophilus parasuis SH0165 7277124 YP_002475623.1 CDS glpK NC_011852.1 1050129 1051637 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(1050129..1051637) Haemophilus parasuis SH0165 7277125 YP_002475624.1 CDS glpF NC_011852.1 1051711 1052424 R COG:G;COG0580; glycerol uptake facilitator protein complement(1051711..1052424) Haemophilus parasuis SH0165 7277126 YP_002475625.1 CDS wecG NC_011852.1 1052617 1053339 R COG:M;COG1922; putative UDP-N-acetyl-D-mannosaminuronic acid transferase complement(1052617..1053339) Haemophilus parasuis SH0165 7277127 YP_002475626.1 CDS HAPS_1060 NC_011852.1 1053332 1054591 R enterobacterial common antigen polymerase; putative common antigen polymerase complement(1053332..1054591) Haemophilus parasuis SH0165 7277128 YP_002475627.1 CDS wecF NC_011852.1 1054632 1055801 R catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase complement(1054632..1055801) Haemophilus parasuis SH0165 7277129 YP_002475628.1 CDS pbpB NC_011852.1 1055944 1058328 D COG:M;COG0744; penicillin-binding protein 1B (PBP1b) 1055944..1058328 Haemophilus parasuis SH0165 7277130 YP_002475629.1 CDS artM NC_011852.1 1058407 1059090 R with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM complement(1058407..1059090) Haemophilus parasuis SH0165 7277131 YP_002475630.1 CDS artQ NC_011852.1 1059090 1059719 R with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ complement(1059090..1059719) Haemophilus parasuis SH0165 7277132 YP_002475631.1 CDS artI NC_011852.1 1059767 1060492 R COG:ET;COG0834; amino acid ABC transporter/signal transduction systems, periplasmic component complement(1059767..1060492) Haemophilus parasuis SH0165 7277133 YP_002475632.1 CDS artP NC_011852.1 1060524 1061258 R With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit complement(1060524..1061258) Haemophilus parasuis SH0165 7277134 YP_002475633.1 CDS uvrD NC_011852.1 1061432 1063615 D unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 1061432..1063615 Haemophilus parasuis SH0165 7277135 YP_002475634.1 CDS rplI NC_011852.1 1063662 1064111 R COG:J;COG0359; 50S ribosomal protein L9 complement(1063662..1064111) Haemophilus parasuis SH0165 7277136 YP_002475635.1 CDS rpsR NC_011852.1 1064130 1064357 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(1064130..1064357) Haemophilus parasuis SH0165 7277137 YP_002475636.1 CDS priB NC_011852.1 1064369 1064695 R binds single-stranded DNA at the primosome assembly site; primosomal replication protein N complement(1064369..1064695) Haemophilus parasuis SH0165 7277138 YP_002475637.1 CDS rpsF NC_011852.1 1064682 1065062 R COG:J;COG0360; 30S ribosomal protein S6 complement(1064682..1065062) Haemophilus parasuis SH0165 7277139 YP_002475638.1 CDS HAPS_1072 NC_011852.1 1065460 1066779 D COG:GEPR;COG0477; metabolite transport protein 1065460..1066779 Haemophilus parasuis SH0165 7277140 YP_002475639.1 CDS licA NC_011852.1 1066804 1067586 R putative choline kinase involved in LPS biosynthesis complement(1066804..1067586) Haemophilus parasuis SH0165 7277141 YP_002475640.1 CDS HAPS_1074 NC_011852.1 1067586 1067954 R COG:R;COG5633; lipoprotein complement(1067586..1067954) Haemophilus parasuis SH0165 7277142 YP_002475641.1 CDS HAPS_1075 NC_011852.1 1067956 1068315 R COG:FGR;COG0537; HIT-like protein/diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases complement(1067956..1068315) Haemophilus parasuis SH0165 7277143 YP_002475642.1 CDS HAPS_1076 NC_011852.1 1068342 1068467 D hypothetical protein 1068342..1068467 Haemophilus parasuis SH0165 7277144 YP_002475643.1 CDS HAPS_1077 NC_011852.1 1068726 1069823 D COG:L;COG5433; ISAma3, family ISAs1 1068726..1069823 Haemophilus parasuis SH0165 7277145 YP_002475644.1 CDS orfG NC_011852.1 1070513 1071097 R may be involved in the utilization of double-stranded DNA as a carbon source; cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein complement(1070513..1071097) Haemophilus parasuis SH0165 7277146 YP_002475645.1 CDS nqrA NC_011852.1 1071492 1072838 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 1071492..1072838 Haemophilus parasuis SH0165 7277147 YP_002475646.1 CDS nqrB NC_011852.1 1072843 1074081 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 1072843..1074081 Haemophilus parasuis SH0165 7277148 YP_002475647.1 CDS nqrC NC_011852.1 1074074 1074850 D COG:C;COG2869; Na(+)-translocating NADH-quinone reductase subunit C 1074074..1074850 Haemophilus parasuis SH0165 7277149 YP_002475648.1 CDS nqrD NC_011852.1 1074850 1075473 D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 1074850..1075473 Haemophilus parasuis SH0165 7277150 YP_002475649.1 CDS nqrE NC_011852.1 1075475 1076071 D COG:C;COG2209; Na(+)-translocating NADH-quinone reductase subunit E 1075475..1076071 Haemophilus parasuis SH0165 7277151 YP_002475650.1 CDS nqrF NC_011852.1 1076084 1077316 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 1076084..1077316 Haemophilus parasuis SH0165 7277152 YP_002475651.1 CDS HAPS_1085 NC_011852.1 1077397 1077825 D nucleotidyltransferase, inorganic polyphosphate/ATP-NAD kinase 1077397..1077825 Haemophilus parasuis SH0165 7277153 YP_002475652.1 CDS dnaN NC_011852.1 1077822 1078121 D COG:R;COG1708; DNA polymerase subunit beta 1077822..1078121 Haemophilus parasuis SH0165 7277154 YP_002475653.1 CDS thiP NC_011852.1 1078118 1079695 R permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein complement(1078118..1079695) Haemophilus parasuis SH0165 7277155 YP_002475654.1 CDS nrfA NC_011852.1 1080020 1081459 D catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 1080020..1081459 Haemophilus parasuis SH0165 7277156 YP_002475655.1 CDS nrfB NC_011852.1 1081480 1082103 D part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia; cytochrome c nitrite reductase pentaheme subunit 1081480..1082103 Haemophilus parasuis SH0165 7277157 YP_002475656.1 CDS nrfC NC_011852.1 1082100 1082777 D COG:C;COG0437; nitrate reductase 1082100..1082777 Haemophilus parasuis SH0165 7277076 YP_002475657.1 CDS nrfD NC_011852.1 1082777 1083730 D COG:P;COG3301; nitrate reductase, transmembrane protein 1082777..1083730 Haemophilus parasuis SH0165 7278815 YP_002475658.1 CDS HAPS_1092 NC_011852.1 1083840 1084628 D COG:M;COG3774; glycosyltransferase 1083840..1084628 Haemophilus parasuis SH0165 7278816 YP_002475659.1 CDS aphA NC_011852.1 1085685 1086350 D COG:R;COG3726; AphA-like protein/membrane protein affecting hemolysin expression 1085685..1086350 Haemophilus parasuis SH0165 7278818 YP_002475660.1 CDS infA NC_011852.1 1086446 1086664 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1086446..1086664 Haemophilus parasuis SH0165 7278819 YP_002475661.1 CDS engC NC_011852.1 1086850 1087782 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1086850..1087782 Haemophilus parasuis SH0165 7278820 YP_002475662.1 CDS yfeA NC_011852.1 1087974 1088852 D COG:P;COG0803; chelated iron ABC transporter periplasmic-binding protein 1087974..1088852 Haemophilus parasuis SH0165 7278821 YP_002475663.1 CDS yfeB NC_011852.1 1088915 1089676 D COG:P;COG1121; chelated iron ABC transporter ATP-binding protein 1088915..1089676 Haemophilus parasuis SH0165 7278822 YP_002475664.1 CDS yfeC NC_011852.1 1089680 1090552 D COG:P;COG1108; chelated iron ABC transporter permease 1089680..1090552 Haemophilus parasuis SH0165 7278823 YP_002475665.1 CDS yfeD NC_011852.1 1090552 1091391 D COG:P;COG1108; chelated iron ABC transporter permease 1090552..1091391 Haemophilus parasuis SH0165 7278824 YP_002475666.1 CDS HAPS_1101 NC_011852.1 1091462 1091875 R COG:S;COG4316; hypothetical protein complement(1091462..1091875) Haemophilus parasuis SH0165 7278825 YP_002475667.1 CDS HAPS_1104 NC_011852.1 1093171 1093512 D COG:K;COG1396; XRE family transcriptional regulator 1093171..1093512 Haemophilus parasuis SH0165 7278828 YP_002475668.1 CDS scrB NC_011852.1 1093682 1095118 R COG:G;COG1621; sucrose-6-phosphate hydrolase complement(1093682..1095118) Haemophilus parasuis SH0165 7278829 YP_002475669.1 CDS phnA NC_011852.1 1096546 1096866 D COG:P;COG2824; alkylphosphonate uptake protein 1096546..1096866 Haemophilus parasuis SH0165 7278831 YP_002475670.1 CDS purN NC_011852.1 1096942 1097562 D COG:F;COG0299; phosphoribosylglycinamide formyltransferase 1096942..1097562 Haemophilus parasuis SH0165 7278832 YP_002475671.1 CDS aspA NC_011852.1 1097770 1099197 D catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 1097770..1099197 Haemophilus parasuis SH0165 7278833 YP_002475672.1 CDS HAPS_1110 NC_011852.1 1099204 1099407 R hypothetical protein complement(1099204..1099407) Haemophilus parasuis SH0165 7278834 YP_002475673.1 CDS htpG NC_011852.1 1099432 1101318 D molecular chaperone; heat shock protein 90 1099432..1101318 Haemophilus parasuis SH0165 7278835 YP_002475674.1 CDS dacB NC_011852.1 1101543 1102391 R COG:M;COG2027; D-alanyl-D-alanine carboxypeptidase complement(1101543..1102391) Haemophilus parasuis SH0165 7278836 YP_002475675.1 CDS greA NC_011852.1 1102511 1102987 D COG:K;COG0782; transcription elongation factor GreA 1102511..1102987 Haemophilus parasuis SH0165 7278837 YP_002475676.1 CDS oppF NC_011852.1 1104258 1105064 R COG:E;COG4608; oligopeptide ABC transporter ATP-binding subunit complement(1104258..1105064) Haemophilus parasuis SH0165 7278839 YP_002475677.1 CDS oppCD NC_011852.1 1105068 1107023 R oligopeptide ABC transporter ATP-binding/permease complement(1105068..1107023) Haemophilus parasuis SH0165 7278840 YP_002475678.1 CDS oppB NC_011852.1 1107023 1107940 R COG:EP;COG0601; oligopeptide ABC transporter permease complement(1107023..1107940) Haemophilus parasuis SH0165 7278841 YP_002475679.1 CDS oppA NC_011852.1 1108151 1109734 R COG:E;COG0747; oligopeptide ABC transporter periplasmic binding protein complement(1108151..1109734) Haemophilus parasuis SH0165 7278842 YP_002475680.1 CDS rnhA NC_011852.1 1109966 1110427 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H complement(1109966..1110427) Haemophilus parasuis SH0165 7278843 YP_002475681.1 CDS purU NC_011852.1 1110433 1111269 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(1110433..1111269) Haemophilus parasuis SH0165 7278844 YP_002475682.1 CDS hns NC_011852.1 1111365 1111769 R COG:R;COG2916; DNA-binding protein H-NS complement(1111365..1111769) Haemophilus parasuis SH0165 7278845 YP_002475683.1 CDS HAPS_1122 NC_011852.1 1112281 1113807 D COG:C;COG1757; Na(+)/H(+) antiporter 1112281..1113807 Haemophilus parasuis SH0165 7278846 YP_002475684.1 CDS nfrE NC_011852.1 1113925 1115826 D COG:O;COG1138; cytochrome c-type biogenesis protein 1113925..1115826 Haemophilus parasuis SH0165 7278847 YP_002475685.1 CDS dsbE NC_011852.1 1115823 1116359 D COG:OC;COG0526; thiol:disulfide interchange protein DsbE 1115823..1116359 Haemophilus parasuis SH0165 7278848 YP_002475686.1 CDS ccmH NC_011852.1 1116356 1116748 D COG:O;COG3088; cytochrome c-type biogenesis protein ccmH 1116356..1116748 Haemophilus parasuis SH0165 7278849 YP_002475687.1 CDS nrfG NC_011852.1 1116741 1117487 D COG:O;COG4235; formate-dependent nitrite reductase complex NrfG subunit, cytochrome c biogenesis factor 1116741..1117487 Haemophilus parasuis SH0165 7278850 YP_002475688.1 CDS fbpC NC_011852.1 1117554 1118576 R COG:E;COG3842; iron(III) ABC transporter ATP-binding protein complement(1117554..1118576) Haemophilus parasuis SH0165 7278851 YP_002475689.1 CDS fbpB NC_011852.1 1118578 1120230 R COG:P;COG1178; iron-uptake permease inner membrane protein complement(1118578..1120230) Haemophilus parasuis SH0165 7278852 YP_002475690.1 CDS fbpA NC_011852.1 1120408 1121433 R COG:P;COG1840; periplasmic iron-binding protein complement(1120408..1121433) Haemophilus parasuis SH0165 7278853 YP_002475691.1 CDS ccp NC_011852.1 1122061 1123458 D COG:P;COG1858; cytochrome c peroxidase 1122061..1123458 Haemophilus parasuis SH0165 7278854 YP_002475692.1 CDS rpsO NC_011852.1 1123639 1123908 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(1123639..1123908) Haemophilus parasuis SH0165 7278855 YP_002475693.1 CDS nhaP NC_011852.1 1124040 1125359 R COG:P;COG0025; NhaP-type Na+/H+ and K+/H+ antiporter complement(1124040..1125359) Haemophilus parasuis SH0165 7278856 YP_002475694.1 CDS ppiD NC_011852.1 1125551 1127425 D COG:O;COG0760; peptidyl-prolyl cis-trans isomerase D 1125551..1127425 Haemophilus parasuis SH0165 7278857 YP_002475695.1 CDS ribD NC_011852.1 1127876 1128967 D COG:H;COG1985; riboflavin biosynthesis protein RibD 1127876..1128967 Haemophilus parasuis SH0165 7278858 YP_002475696.1 CDS ribE NC_011852.1 1128969 1129613 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1128969..1129613 Haemophilus parasuis SH0165 7278859 YP_002475697.1 CDS ribA NC_011852.1 1129745 1130944 D COG:H;COG0108; riboflavin biosynthesis protein ribA 1129745..1130944 Haemophilus parasuis SH0165 7278860 YP_002475698.1 CDS ribH NC_011852.1 1131140 1131601 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1131140..1131601 Haemophilus parasuis SH0165 7278861 YP_002475699.1 CDS HAPS_1138 NC_011852.1 1131713 1132504 R COG:R;COG1101; ABC transporter ATP-binding protein complement(1131713..1132504) Haemophilus parasuis SH0165 7278862 YP_002475700.1 CDS HAPS_1139 NC_011852.1 1132504 1133439 R COG:R;COG4120; ABC transporter inner membrane subunit complement(1132504..1133439) Haemophilus parasuis SH0165 7278863 YP_002475701.1 CDS HAPS_1140 NC_011852.1 1133491 1133610 R hypothetical protein complement(1133491..1133610) Haemophilus parasuis SH0165 7278864 YP_002475702.1 CDS ldhL NC_011852.1 1133632 1133850 D L-lactate dehydrogenase 1133632..1133850 Haemophilus parasuis SH0165 7278865 YP_002475703.1 CDS HAPS_1142 NC_011852.1 1133964 1134104 R hypothetical protein complement(1133964..1134104) Haemophilus parasuis SH0165 7278866 YP_002475704.1 CDS HAPS_1143 NC_011852.1 1134129 1135571 R YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase complement(1134129..1135571) Haemophilus parasuis SH0165 7278867 YP_002475705.1 CDS folD NC_011852.1 1135678 1136532 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(1135678..1136532) Haemophilus parasuis SH0165 7278868 YP_002475706.1 CDS int NC_011852.1 1136938 1137993 R COG:L;COG0582; phage integrase complement(1136938..1137993) Haemophilus parasuis SH0165 7278871 YP_002475707.1 CDS HAPS_1148 NC_011852.1 1138292 1139095 R putative prophage antirepressor complement(1138292..1139095) Haemophilus parasuis SH0165 7278872 YP_002475708.1 CDS HAPS_1149 NC_011852.1 1139481 1140578 R COG:L;COG5433; ISAma3, family ISAs1 complement(1139481..1140578) Haemophilus parasuis SH0165 7278873 YP_002475709.1 CDS HAPS_1150 NC_011852.1 1140667 1141122 R COG:S;COG5346; putative inner membrane protein complement(1140667..1141122) Haemophilus parasuis SH0165 7278874 YP_002475710.1 CDS HAPS_1151 NC_011852.1 1141106 1141303 R hypothetical protein complement(1141106..1141303) Haemophilus parasuis SH0165 7278875 YP_002475711.1 CDS HAPS_1152 NC_011852.1 1141572 1141952 R COG:S;COG3692; putative phage associated protein complement(1141572..1141952) Haemophilus parasuis SH0165 7278876 YP_002475712.1 CDS HAPS_1153 NC_011852.1 1142318 1142530 D hypothetical protein 1142318..1142530 Haemophilus parasuis SH0165 7278877 YP_002475713.1 CDS HAPS_1154 NC_011852.1 1142549 1142812 R hypothetical protein complement(1142549..1142812) Haemophilus parasuis SH0165 7278878 YP_002475714.1 CDS HAPS_1155 NC_011852.1 1142836 1143375 R phage-like protein complement(1142836..1143375) Haemophilus parasuis SH0165 7278879 YP_002475715.1 CDS HAPS_1156 NC_011852.1 1143719 1143907 D hypothetical protein 1143719..1143907 Haemophilus parasuis SH0165 7278880 YP_002475716.1 CDS exo NC_011852.1 1143949 1144563 R putative bacteriophage exonuclease complement(1143949..1144563) Haemophilus parasuis SH0165 7278881 YP_002475717.1 CDS bet NC_011852.1 1144560 1145426 R phage recombination protein Bet complement(1144560..1145426) Haemophilus parasuis SH0165 7278882 YP_002475718.1 CDS HAPS_1159 NC_011852.1 1145436 1145894 R phage-like endonuclease protein complement(1145436..1145894) Haemophilus parasuis SH0165 7278883 YP_002475719.1 CDS HAPS_1160 NC_011852.1 1145903 1146061 R hypothetical protein complement(1145903..1146061) Haemophilus parasuis SH0165 7278884 YP_002475720.1 CDS HAPS_1163 NC_011852.1 1146784 1148214 D putative outer membrane protein 1146784..1148214 Haemophilus parasuis SH0165 7278887 YP_002475721.1 CDS HAPS_1164 NC_011852.1 1148211 1148822 R COG:H;COG0212; 5-formyltetrahydrofolate cyclo-ligase complement(1148211..1148822) Haemophilus parasuis SH0165 7278888 YP_002475722.1 CDS zapA NC_011852.1 1149047 1149376 R COG:S;COG3027; cell division protein ZapA complement(1149047..1149376) Haemophilus parasuis SH0165 7278889 YP_002475723.1 CDS HAPS_1166 NC_011852.1 1149451 1149996 D COG:S;COG3079; yecA family protein 1149451..1149996 Haemophilus parasuis SH0165 7278890 YP_002475724.1 CDS nrdD NC_011852.1 1150021 1151802 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(1150021..1151802) Haemophilus parasuis SH0165 7278891 YP_002475725.1 CDS nrdG NC_011852.1 1151799 1152269 R anaerobic ribonucleoside-triphosphate reductase activating protein complement(1151799..1152269) Haemophilus parasuis SH0165 7278892 YP_002475726.1 CDS trpG NC_011852.1 1152444 1153007 R catalyzes the formation of anthranilate from chorismate and glutamine; functions in tryptophan biosynthesis; putative anthranilate synthase component II complement(1152444..1153007) Haemophilus parasuis SH0165 7278893 YP_002475727.1 CDS rmuC NC_011852.1 1153007 1154623 R COG:S;COG1322; DNA recombination protein RmuC-like protein complement(1153007..1154623) Haemophilus parasuis SH0165 7278894 YP_002475728.1 CDS hemB NC_011852.1 1154803 1155825 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1154803..1155825 Haemophilus parasuis SH0165 7278895 YP_002475729.1 CDS HAPS_1172 NC_011852.1 1156034 1156615 D COG:T;COG0664; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase 1156034..1156615 Haemophilus parasuis SH0165 7278897 YP_002475730.1 CDS aslB NC_011852.1 1156622 1157833 D COG:R;COG0641; arylsulfatase regulator 1156622..1157833 Haemophilus parasuis SH0165 7278898 YP_002475731.1 CDS hepA NC_011852.1 1158100 1160919 R transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA complement(1158100..1160919) Haemophilus parasuis SH0165 7278899 YP_002475732.1 CDS pgi NC_011852.1 1161083 1162726 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(1161083..1162726) Haemophilus parasuis SH0165 7278900 YP_002475733.1 CDS HAPS_1176 NC_011852.1 1162745 1163005 R COG:S;COG2960; hypothetical protein complement(1162745..1163005) Haemophilus parasuis SH0165 7278901 YP_002475734.1 CDS aroE NC_011852.1 1163690 1164508 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(1163690..1164508) Haemophilus parasuis SH0165 7278906 YP_002475735.1 CDS sua5 NC_011852.1 1164512 1165066 R COG:J;COG0009; SUA5 protein translation factor complement(1164512..1165066) Haemophilus parasuis SH0165 7278907 YP_002475736.1 CDS HAPS_1183 NC_011852.1 1165066 1165596 R COG:L;COG0551; DNA topoisomerase I-like protein complement(1165066..1165596) Haemophilus parasuis SH0165 7278908 YP_002475737.1 CDS HAPS_1184 NC_011852.1 1165604 1165909 R COG:S;COG3097; hypothetical protein complement(1165604..1165909) Haemophilus parasuis SH0165 7278909 YP_002475738.1 CDS recX NC_011852.1 1165902 1166357 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(1165902..1166357) Haemophilus parasuis SH0165 7278910 YP_002475739.1 CDS recA NC_011852.1 1166410 1167528 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(1166410..1167528) Haemophilus parasuis SH0165 7278911 YP_002475740.1 CDS HAPS_1187 NC_011852.1 1167661 1168266 R COG:EH;COG0115; hypothetical protein complement(1167661..1168266) Haemophilus parasuis SH0165 7278912 YP_002475741.1 CDS pabB NC_011852.1 1168244 1169215 R catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; para-aminobenzoate synthase component I complement(1168244..1169215) Haemophilus parasuis SH0165 7278913 YP_002475742.1 CDS HAPS_1190 NC_011852.1 1169438 1169551 D hypothetical protein 1169438..1169551 Haemophilus parasuis SH0165 7278915 YP_002475743.1 CDS tehB NC_011852.1 1169666 1170529 D with TehA confers resistance to tellurite; tellurite resistance protein TehB 1169666..1170529 Haemophilus parasuis SH0165 7278916 YP_002475744.1 CDS dusA NC_011852.1 1170805 1171776 D COG:J;COG0042; tRNA-dihydrouridine synthase A 1170805..1171776 Haemophilus parasuis SH0165 7278917 YP_002475745.1 CDS rpoD NC_011852.1 1172905 1174770 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(1172905..1174770) Haemophilus parasuis SH0165 7278919 YP_002475746.1 CDS dnaG NC_011852.1 1174869 1176617 R synthesizes RNA primers at the replication forks; DNA primase complement(1174869..1176617) Haemophilus parasuis SH0165 7278920 YP_002475747.1 CDS rpsU NC_011852.1 1176761 1176976 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(1176761..1176976) Haemophilus parasuis SH0165 7278921 YP_002475748.1 CDS HAPS_1197 NC_011852.1 1177535 1177750 R hypothetical protein complement(1177535..1177750) Haemophilus parasuis SH0165 7278922 YP_002475749.1 CDS rne NC_011852.1 1177843 1180752 R COG:J;COG1530; ribonuclease E complement(1177843..1180752) Haemophilus parasuis SH0165 7278923 YP_002475750.1 CDS mpl NC_011852.1 1181084 1182472 R COG:M;COG0773; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(1181084..1182472) Haemophilus parasuis SH0165 7278924 YP_002475751.1 CDS fbp NC_011852.1 1182594 1183595 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1182594..1183595 Haemophilus parasuis SH0165 7278925 YP_002475752.1 CDS HAPS_1201 NC_011852.1 1183621 1183746 D hypothetical protein 1183621..1183746 Haemophilus parasuis SH0165 7278926 YP_002475753.1 CDS hbpA NC_011852.1 1183743 1185338 D COG:E;COG0747; heme-binding protein A 1183743..1185338 Haemophilus parasuis SH0165 7278927 YP_002475754.1 CDS scrR NC_011852.1 1185469 1186491 D COG:K;COG1609; sucrose operon repressor 1185469..1186491 Haemophilus parasuis SH0165 7278928 YP_002475755.1 CDS tyrR NC_011852.1 1186644 1188242 D COG:KE;COG3283; transcriptional regulatory protein TyrR 1186644..1188242 Haemophilus parasuis SH0165 7278929 YP_002475756.1 CDS sapA NC_011852.1 1188239 1189879 D COG:E;COG4166; peptide transport periplasmic protein SapA 1188239..1189879 Haemophilus parasuis SH0165 7278930 YP_002475757.1 CDS sapB NC_011852.1 1189881 1190843 D COG:V;COG4168; peptide transport system permease SapB 1189881..1190843 Haemophilus parasuis SH0165 7278931 YP_002475758.1 CDS psd NC_011852.1 1191031 1191924 D catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 1191031..1191924 Haemophilus parasuis SH0165 7278932 YP_002475759.1 CDS dsbE NC_011852.1 1191971 1192510 D COG:OC;COG0526; thiol-disulfide interchange protein 1191971..1192510 Haemophilus parasuis SH0165 7278933 YP_002475760.1 CDS ccmH_1 NC_011852.1 1192510 1192974 D COG:O;COG3088; cytochrome C-type biogenesis protein 1192510..1192974 Haemophilus parasuis SH0165 7278934 YP_002475761.1 CDS ccmH_2 NC_011852.1 1192974 1193876 D COG:O;COG4235; cytochrome C-type biogenesis protein, TPR repeat-containing protein 1192974..1193876 Haemophilus parasuis SH0165 7278935 YP_002475762.1 CDS miaA NC_011852.1 1193909 1194853 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1193909..1194853 Haemophilus parasuis SH0165 7278936 YP_002475763.1 CDS hfq NC_011852.1 1194908 1195189 D COG:R;COG1923; RNA-binding protein Hfq 1194908..1195189 Haemophilus parasuis SH0165 7278937 YP_002475764.1 CDS hflX NC_011852.1 1195344 1196570 D COG:R;COG2262; GTP-binding protein hflX 1195344..1196570 Haemophilus parasuis SH0165 7278938 YP_002475765.1 CDS gph NC_011852.1 1196627 1197301 D catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 1196627..1197301 Haemophilus parasuis SH0165 7278939 YP_002475766.1 CDS nanK NC_011852.1 1197756 1198643 R catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; N-acetylmannosamine kinase complement(1197756..1198643) Haemophilus parasuis SH0165 7278940 YP_002475767.1 CDS nanE NC_011852.1 1198645 1199340 R Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase complement(1198645..1199340) Haemophilus parasuis SH0165 7278941 YP_002475768.1 CDS idgA NC_011852.1 1199530 1200438 R COG:Q;COG2313; indigoidine synthase A-like protein complement(1199530..1200438) Haemophilus parasuis SH0165 7278942 YP_002475769.1 CDS HAPS_1218 NC_011852.1 1200431 1201534 R COG:G;COG0524; carbohydrate kinase-like protein complement(1200431..1201534) Haemophilus parasuis SH0165 7278943 YP_002475770.1 CDS HAPS_1220 NC_011852.1 1202441 1203700 D COG:F;COG1972; transport system nucleoside permease 1202441..1203700 Haemophilus parasuis SH0165 7278945 YP_002475771.1 CDS deoC NC_011852.1 1203791 1204570 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1203791..1204570 Haemophilus parasuis SH0165 7278946 YP_002475772.1 CDS deoD NC_011852.1 1204599 1205318 D catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 1204599..1205318 Haemophilus parasuis SH0165 7278947 YP_002475773.1 CDS HAPS_1223 NC_011852.1 1206157 1206759 R COG:S;COG3102; hypothetical protein complement(1206157..1206759) Haemophilus parasuis SH0165 7278948 YP_002475774.1 CDS argS NC_011852.1 1206877 1208523 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1206877..1208523 Haemophilus parasuis SH0165 7278949 YP_002475775.1 CDS tuf NC_011852.1 1209746 1210933 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(1209746..1210933) Haemophilus parasuis SH0165 7278952 YP_002475776.1 CDS HAPS_1233 NC_011852.1 1211686 1211805 R hypothetical protein complement(1211686..1211805) Haemophilus parasuis SH0165 7278957 YP_002475777.1 CDS coaA NC_011852.1 1211798 1212739 D catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 1211798..1212739 Haemophilus parasuis SH0165 7278959 YP_002475778.1 CDS pssA NC_011852.1 1212742 1213449 D COG:R;COG4123; phosphatidylserine synthase 1212742..1213449 Haemophilus parasuis SH0165 7278958 YP_002475779.1 CDS lipA NC_011852.1 1213543 1214505 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(1213543..1214505) Haemophilus parasuis SH0165 7278960 YP_002475780.1 CDS lipB NC_011852.1 1214518 1215114 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(1214518..1215114) Haemophilus parasuis SH0165 7278961 YP_002475781.1 CDS HAPS_1237 NC_011852.1 1215178 1215477 R COG:S;COG2921; hypothetical protein complement(1215178..1215477) Haemophilus parasuis SH0165 7278962 YP_002475782.1 CDS dacA NC_011852.1 1215591 1216772 R COG:M;COG1686; D-alanyl-D-alanine carboxypeptidase complement(1215591..1216772) Haemophilus parasuis SH0165 7278963 YP_002475783.1 CDS rlpA NC_011852.1 1216787 1217779 R COG:M;COG0797; rare lipoprotein A complement(1216787..1217779) Haemophilus parasuis SH0165 7278964 YP_002475784.1 CDS rodA NC_011852.1 1217807 1218757 R COG:D;COG0772; rod-shape-determining protein RodA complement(1217807..1218757) Haemophilus parasuis SH0165 7278965 YP_002475785.1 CDS ftsI NC_011852.1 1218933 1220867 R COG:M;COG0768; cell division protein FtsI complement(1218933..1220867) Haemophilus parasuis SH0165 7278966 YP_002475786.1 CDS HAPS_1242 NC_011852.1 1220874 1221308 R COG:S;COG1576; SPOUT methyltransferase superfamily protein complement(1220874..1221308) Haemophilus parasuis SH0165 7278967 YP_002475787.1 CDS HAPS_1243 NC_011852.1 1221342 1221656 R COG:S;COG0799; plant Iojap-like protein complement(1221342..1221656) Haemophilus parasuis SH0165 7278968 YP_002475788.1 CDS sfsA NC_011852.1 1222256 1222966 D Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 1222256..1222966 Haemophilus parasuis SH0165 7278971 YP_002475789.1 CDS hslV NC_011852.1 1223448 1223969 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1223448..1223969 Haemophilus parasuis SH0165 7278973 YP_002475790.1 CDS hslU NC_011852.1 1224059 1225381 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1224059..1225381 Haemophilus parasuis SH0165 7278974 YP_002475791.1 CDS menD NC_011852.1 1225513 1227222 D SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 1225513..1227222 Haemophilus parasuis SH0165 7277881 YP_002475792.1 CDS yfbB NC_011852.1 1227261 1227989 D catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB 1227261..1227989 Haemophilus parasuis SH0165 7278044 YP_002475793.1 CDS accD NC_011852.1 1227998 1228228 D acetyl-CoA carboxylase subunit beta 1227998..1228228 Haemophilus parasuis SH0165 7278045 YP_002475794.1 CDS phoH NC_011852.1 1228528 1229595 R COG:T;COG1702; phosphate starvation-inducible protein PhoH complement(1228528..1229595) Haemophilus parasuis SH0165 7278046 YP_002475795.1 CDS tbpA NC_011852.1 1229834 1230814 D COG:H;COG4143; thiamine-binding periplasmic protein 1229834..1230814 Haemophilus parasuis SH0165 7278047 YP_002475796.1 CDS priA NC_011852.1 1230854 1233067 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(1230854..1233067) Haemophilus parasuis SH0165 7278048 YP_002475797.1 CDS HAPS_1256 NC_011852.1 1233067 1233933 R COG:R;COG2962; DMT superfamily drug/metabolite transporter complement(1233067..1233933) Haemophilus parasuis SH0165 7278049 YP_002475798.1 CDS HAPS_1257 NC_011852.1 1233933 1234814 R COG:R;COG2962; DMT superfamily drug/metabolite transporter complement(1233933..1234814) Haemophilus parasuis SH0165 7278050 YP_002475799.1 CDS alaT NC_011852.1 1235008 1236225 R broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT complement(1235008..1236225) Haemophilus parasuis SH0165 7278051 YP_002475800.1 CDS menF NC_011852.1 1236372 1237646 D COG:HQ;COG1169; menaquinone-specific isochorismate synthase 1236372..1237646 Haemophilus parasuis SH0165 7278052 YP_002475801.1 CDS pgpB NC_011852.1 1237938 1238660 D COG:I;COG0671; phosphatidylglycerophosphatase B 1237938..1238660 Haemophilus parasuis SH0165 7278053 YP_002475802.1 CDS nagK NC_011852.1 1238663 1239577 D catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; N-acetyl-D-glucosamine kinase 1238663..1239577 Haemophilus parasuis SH0165 7278054 YP_002475803.1 CDS gloB NC_011852.1 1239744 1240451 D COG:R;COG0491; putative hydroxyacylglutathione hydrolase 1239744..1240451 Haemophilus parasuis SH0165 7278055 YP_002475804.1 CDS uppS NC_011852.1 1240608 1241276 D COG:I;COG0020; undecaprenyl pyrophosphate synthetase 1240608..1241276 Haemophilus parasuis SH0165 7278056 YP_002475805.1 CDS cdsA NC_011852.1 1241294 1242163 D COG:I;COG0575; CDP-diglyceride pyrophosphorylase 1241294..1242163 Haemophilus parasuis SH0165 7278057 YP_002475806.1 CDS yaeL NC_011852.1 1242173 1243492 D COG:M;COG0750; putative zinc metalloprotease 1242173..1243492 Haemophilus parasuis SH0165 7278058 YP_002475807.1 CDS ompD15 NC_011852.1 1243543 1245960 D COG:M;COG4775; protective surface antigen D15 1243543..1245960 Haemophilus parasuis SH0165 7278059 YP_002475808.1 CDS omp26 NC_011852.1 1246035 1246838 D COG:M;COG2825; outer membrane protein 26 1246035..1246838 Haemophilus parasuis SH0165 7278060 YP_002475809.1 CDS lpxD NC_011852.1 1246838 1247863 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1246838..1247863 Haemophilus parasuis SH0165 7278061 YP_002475810.1 CDS fabZ NC_011852.1 1247882 1248349 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1247882..1248349 Haemophilus parasuis SH0165 7278062 YP_002475811.1 CDS lpxA NC_011852.1 1248377 1249171 D COG:M;COG1043; UDP-N-acetylglucosamine acyltransferase 1248377..1249171 Haemophilus parasuis SH0165 7278063 YP_002475812.1 CDS thrA NC_011852.1 1249562 1252006 D multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 1249562..1252006 Haemophilus parasuis SH0165 7278064 YP_002475813.1 CDS thrB NC_011852.1 1252103 1253050 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1252103..1253050 Haemophilus parasuis SH0165 7278065 YP_002475814.1 CDS tyrA NC_011852.1 1253142 1254263 R catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase complement(1253142..1254263) Haemophilus parasuis SH0165 7278066 YP_002475815.1 CDS aroF NC_011852.1 1254265 1255326 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1254265..1255326) Haemophilus parasuis SH0165 7278067 YP_002475816.1 CDS opsX NC_011852.1 1255477 1256499 R COG:M;COG0859; ADP-heptose:LPS heptosyltransferase complement(1255477..1256499) Haemophilus parasuis SH0165 7278068 YP_002475817.1 CDS HAPS_1276 NC_011852.1 1256508 1256846 R COG:P;COG2920; dissimilatory sulfite reductase subunit gamma complement(1256508..1256846) Haemophilus parasuis SH0165 7278069 YP_002475818.1 CDS HAPS_1278 NC_011852.1 1257967 1259415 R COG:E;COG1115; Na+/alanine symporter complement(1257967..1259415) Haemophilus parasuis SH0165 7278071 YP_002475819.1 CDS rcnA NC_011852.1 1259618 1260595 R COG:R;COG2215; nickel/cobalt ABC transporter permease complement(1259618..1260595) Haemophilus parasuis SH0165 7278072 YP_002475820.1 CDS rcnB NC_011852.1 1260586 1261227 R COG:R;COG3683; nickel/cobalt ABC transporter periplasmic component complement(1260586..1261227) Haemophilus parasuis SH0165 7278073 YP_002475821.1 CDS prlC NC_011852.1 1261904 1263937 R COG:E;COG0339; Zn-dependent oligopeptidase complement(1261904..1263937) Haemophilus parasuis SH0165 7278074 YP_002475822.1 CDS pheA NC_011852.1 1264119 1265285 D COG:E;COG0077; bifunctional prephenate dehydratase/chorismate mutase 1264119..1265285 Haemophilus parasuis SH0165 7278075 YP_002475823.1 CDS ung NC_011852.1 1265316 1265978 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(1265316..1265978) Haemophilus parasuis SH0165 7278076 YP_002475824.1 CDS grcA NC_011852.1 1266174 1266557 D stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 1266174..1266557 Haemophilus parasuis SH0165 7278077 YP_002475825.1 CDS accC NC_011852.1 1266644 1267987 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(1266644..1267987) Haemophilus parasuis SH0165 7278078 YP_002475826.1 CDS accB NC_011852.1 1268063 1268533 R COG:I;COG0511; biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) complement(1268063..1268533) Haemophilus parasuis SH0165 7278079 YP_002475827.1 CDS HAPS_1287 NC_011852.1 1268599 1268754 D hypothetical protein 1268599..1268754 Haemophilus parasuis SH0165 7278080 YP_002475828.1 CDS aroQ NC_011852.1 1268730 1269173 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(1268730..1269173) Haemophilus parasuis SH0165 7278081 YP_002475829.1 CDS bioB NC_011852.1 1269333 1270340 R COG:H;COG0502; biotin synthase complement(1269333..1270340) Haemophilus parasuis SH0165 7278082 YP_002475830.1 CDS dapD NC_011852.1 1270396 1271220 R COG:E;COG2171; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(1270396..1271220) Haemophilus parasuis SH0165 7278083 YP_002475831.1 CDS HAPS_1291 NC_011852.1 1271198 1271320 R hypothetical protein complement(1271198..1271320) Haemophilus parasuis SH0165 7278084 YP_002475832.1 CDS HAPS_1292 NC_011852.1 1271463 1271930 D COG:R;COG1399; hypothetical protein 1271463..1271930 Haemophilus parasuis SH0165 7278085 YP_002475833.1 CDS rpmF NC_011852.1 1271951 1272112 D COG:J;COG0333; 50S ribosomal protein L32 1271951..1272112 Haemophilus parasuis SH0165 7278086 YP_002475834.1 CDS plsX NC_011852.1 1272169 1273164 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1272169..1273164 Haemophilus parasuis SH0165 7278087 YP_002475835.1 CDS dat NC_011852.1 1273450 1274466 D COG:E;COG0160; diaminobutyrate--2-oxoglutarate aminotransferase 1273450..1274466 Haemophilus parasuis SH0165 7278088 YP_002475836.1 CDS ddc NC_011852.1 1274438 1275895 D COG:E;COG0076; L-2,4-diaminobutyrate decarboxylase 1274438..1275895 Haemophilus parasuis SH0165 7278089 YP_002475837.1 CDS ppnK NC_011852.1 1276156 1277037 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1276156..1277037 Haemophilus parasuis SH0165 7278090 YP_002475838.1 CDS rph NC_011852.1 1277146 1277880 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(1277146..1277880) Haemophilus parasuis SH0165 7278091 YP_002475839.1 CDS HAPS_1299 NC_011852.1 1277971 1278834 D COG:S;COG1561; hypothetical protein 1277971..1278834 Haemophilus parasuis SH0165 7278092 YP_002475840.1 CDS murB NC_011852.1 1278838 1279866 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1278838..1279866 Haemophilus parasuis SH0165 7278093 YP_002475841.1 CDS birA NC_011852.1 1279873 1280634 D COG:H;COG0340; bifunctional biotin operon repressor/biotin synthetase BirA 1279873..1280634 Haemophilus parasuis SH0165 7278094 YP_002475842.1 CDS HAPS_1302 NC_011852.1 1280836 1281198 D COG:S;COG2832; hypothetical protein 1280836..1281198 Haemophilus parasuis SH0165 7278095 YP_002475843.1 CDS mogA NC_011852.1 1281250 1281843 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 1281250..1281843 Haemophilus parasuis SH0165 7278096 YP_002475844.1 CDS glnB NC_011852.1 1281852 1282190 D COG:E;COG0347; nitrogen regulatory protein P-II 1281852..1282190 Haemophilus parasuis SH0165 7278097 YP_002475845.1 CDS lspA NC_011852.1 1282199 1282687 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1282199..1282687 Haemophilus parasuis SH0165 7278098 YP_002475846.1 CDS ispH NC_011852.1 1282688 1283632 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1282688..1283632 Haemophilus parasuis SH0165 7278099 YP_002475847.1 CDS HAPS_1307 NC_011852.1 1283632 1283871 D COG:S;COG2938; hypothetical protein 1283632..1283871 Haemophilus parasuis SH0165 7278100 YP_002475848.1 CDS mutY NC_011852.1 1284198 1285172 D COG:L;COG1194; A/G-specific DNA-adenine glycosylase 1284198..1285172 Haemophilus parasuis SH0165 7278101 YP_002475849.1 CDS yggX NC_011852.1 1285162 1285437 D COG:CO;COG2924; hypothetical protein 1285162..1285437 Haemophilus parasuis SH0165 7278102 YP_002475850.1 CDS mltC NC_011852.1 1285448 1286542 D Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 1285448..1286542 Haemophilus parasuis SH0165 7278103 YP_002475851.1 CDS HAPS_1311 NC_011852.1 1286499 1286642 R hypothetical protein complement(1286499..1286642) Haemophilus parasuis SH0165 7278104 YP_002475852.1 CDS glpC NC_011852.1 1287241 1288518 R anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C complement(1287241..1288518) Haemophilus parasuis SH0165 7278107 YP_002475853.1 CDS glpB NC_011852.1 1288520 1289803 R sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B complement(1288520..1289803) Haemophilus parasuis SH0165 7278108 YP_002475854.1 CDS glpA NC_011852.1 1289793 1291295 R anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A complement(1289793..1291295) Haemophilus parasuis SH0165 7278109 YP_002475855.1 CDS rluC NC_011852.1 1292521 1293480 R catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; 23S rRNA pseudouridylate synthase C complement(1292521..1293480) Haemophilus parasuis SH0165 7278112 YP_002475856.1 CDS mscS NC_011852.1 1293570 1294481 D COG:M;COG0668; small-conductance mechanosensitive channel 1293570..1294481 Haemophilus parasuis SH0165 7278113 YP_002475857.1 CDS htpX NC_011852.1 1294598 1295353 R COG:O;COG0501; Zn-dependent protease with chaperone function complement(1294598..1295353) Haemophilus parasuis SH0165 7278114 YP_002475858.1 CDS ppa NC_011852.1 1295420 1295947 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(1295420..1295947) Haemophilus parasuis SH0165 7278115 YP_002475859.1 CDS HAPS_1323 NC_011852.1 1296082 1298934 R COG:KL;COG0553; superfamily II DNA/RNA helicase, SNF2 family, ATP-dependent complement(1296082..1298934) Haemophilus parasuis SH0165 7278116 YP_002475860.1 CDS fic NC_011852.1 1298952 1300019 R COG:S;COG3177; filamentation induced by cAMP protein fic complement(1298952..1300019) Haemophilus parasuis SH0165 7278117 YP_002475861.1 CDS HAPS_1325 NC_011852.1 1300179 1303583 R type III restriction protein, res subunit complement(1300179..1303583) Haemophilus parasuis SH0165 7278118 YP_002475862.1 CDS ilvC NC_011852.1 1307007 1308488 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1307007..1308488 Haemophilus parasuis SH0165 7278120 YP_002475863.1 CDS HAPS_1328 NC_011852.1 1308983 1309990 R hypothetical protein complement(1308983..1309990) Haemophilus parasuis SH0165 7278121 YP_002475864.1 CDS HAPS_1329 NC_011852.1 1310631 1310756 D hypothetical protein 1310631..1310756 Haemophilus parasuis SH0165 7278122 YP_002475865.1 CDS HAPS_1330 NC_011852.1 1310762 1310971 D hypothetical protein 1310762..1310971 Haemophilus parasuis SH0165 7278123 YP_002475866.1 CDS HAPS_1331 NC_011852.1 1311124 1311498 D hypothetical protein 1311124..1311498 Haemophilus parasuis SH0165 7278124 YP_002475867.1 CDS putP NC_011852.1 1318342 1319682 D COG:ER;COG0591; sodium/proline symporter, proline permease 1318342..1319682 Haemophilus parasuis SH0165 7277477 YP_002475868.1 CDS putA NC_011852.1 1319798 1323409 D proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1319798..1323409 Haemophilus parasuis SH0165 7277478 YP_002475869.1 CDS nrdB NC_011852.1 1323727 1324704 D ribonucleotide-diphosphate reductase subunit beta 1323727..1324704 Haemophilus parasuis SH0165 7277479 YP_002475870.1 CDS nrdA NC_011852.1 1324691 1326400 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1324691..1326400 Haemophilus parasuis SH0165 7277480 YP_002475871.1 CDS HAPS_1343 NC_011852.1 1326455 1326574 D hypothetical protein 1326455..1326574 Haemophilus parasuis SH0165 7277481 YP_002475872.1 CDS potD NC_011852.1 1326588 1327637 D COG:E;COG0687; spermidine/putrescine-binding periplasmic protein (SPBP) 1326588..1327637 Haemophilus parasuis SH0165 7277482 YP_002475873.1 CDS yaaH NC_011852.1 1327652 1328218 D COG:S;COG1584; permease 1327652..1328218 Haemophilus parasuis SH0165 7277483 YP_002475874.1 CDS ruvA NC_011852.1 1328505 1329020 D COG:L;COG0632; holliday junction DNA helicase motor protein 1328505..1329020 Haemophilus parasuis SH0165 7277484 YP_002475875.1 CDS sprT NC_011852.1 1329142 1329612 R COG:S;COG3091; hypothetical protein complement(1329142..1329612) Haemophilus parasuis SH0165 7277485 YP_002475876.1 CDS HAPS_1348 NC_011852.1 1329636 1330382 R COG:J;COG3719; ribonuclease complement(1329636..1330382) Haemophilus parasuis SH0165 7277486 YP_002475877.1 CDS cysK NC_011852.1 1330565 1331515 D COG:E;COG0031; cysteine synthase 1330565..1331515 Haemophilus parasuis SH0165 7277487 YP_002475878.1 CDS mviN NC_011852.1 1331579 1333123 R COG:R;COG0728; MviN virulence factor complement(1331579..1333123) Haemophilus parasuis SH0165 7277488 YP_002475879.1 CDS rpsT NC_011852.1 1333391 1333654 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1333391..1333654 Haemophilus parasuis SH0165 7277489 YP_002475880.1 CDS HAPS_1352 NC_011852.1 1333665 1333781 D hypothetical protein 1333665..1333781 Haemophilus parasuis SH0165 7277490 YP_002475881.1 CDS mutL NC_011852.1 1333972 1335741 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 1333972..1335741 Haemophilus parasuis SH0165 7277491 YP_002475882.1 CDS metE NC_011852.1 1335955 1338225 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1335955..1338225 Haemophilus parasuis SH0165 7277492 YP_002475883.1 CDS recN NC_011852.1 1338468 1340147 D COG:L;COG0497; DNA repair protein RecN 1338468..1340147 Haemophilus parasuis SH0165 7277493 YP_002475884.1 CDS lppA NC_011852.1 1340213 1341151 R outer membrane lipoprotein A complement(1340213..1341151) Haemophilus parasuis SH0165 7277494 YP_002475885.1 CDS HAPS_1357 NC_011852.1 1341232 1341621 R COG:L;COG3676; ISMha3, family IS1595 complement(1341232..1341621) Haemophilus parasuis SH0165 7277495 YP_002475886.1 CDS mutH NC_011852.1 1341954 1342535 D MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 1341954..1342535 Haemophilus parasuis SH0165 7277496 YP_002475887.1 CDS HAPS_1359 NC_011852.1 1342492 1342611 R hypothetical protein complement(1342492..1342611) Haemophilus parasuis SH0165 7277497 YP_002475888.1 CDS terC NC_011852.1 1342622 1343350 D COG:P;COG0861; tellurium resistance membrane protein TerC 1342622..1343350 Haemophilus parasuis SH0165 7277498 YP_002475889.1 CDS thiQ NC_011852.1 1343705 1344298 D COG:H;COG3840; thiamin ABC transporter ATP-binding protein 1343705..1344298 Haemophilus parasuis SH0165 7277499 YP_002475890.1 CDS fstN NC_011852.1 1344449 1345081 D COG:D;COG3087; cell division protein FtsN, sporulation domain-containing protein 1344449..1345081 Haemophilus parasuis SH0165 7277500 YP_002475891.1 CDS HAPS_1363 NC_011852.1 1345097 1345417 D COG:S;COG4390; hypothetical protein 1345097..1345417 Haemophilus parasuis SH0165 7277501 YP_002475892.1 CDS tonB NC_011852.1 1345494 1346267 R TobB energy transducing protein complement(1345494..1346267) Haemophilus parasuis SH0165 7277502 YP_002475893.1 CDS exbD NC_011852.1 1346267 1346653 R COG:U;COG0848; TonB system transport protein ExbD type-2/biopolymer transport protein complement(1346267..1346653) Haemophilus parasuis SH0165 7277503 YP_002475894.1 CDS exbB NC_011852.1 1346696 1347148 R COG:U;COG0811; biopolymer transport protein ExbB complement(1346696..1347148) Haemophilus parasuis SH0165 7277504 YP_002475895.1 CDS pspE NC_011852.1 1347316 1347642 D COG:P;COG0607; rhodanese-related sulfur transferase 1347316..1347642 Haemophilus parasuis SH0165 7277505 YP_002475896.1 CDS sohB NC_011852.1 1347704 1348759 D SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 1347704..1348759 Haemophilus parasuis SH0165 7277506 YP_002475897.1 CDS dusB NC_011852.1 1348978 1349955 D COG:J;COG0042; tRNA-dihydrouridine synthase B 1348978..1349955 Haemophilus parasuis SH0165 7277507 YP_002475898.1 CDS fis NC_011852.1 1349972 1350268 D Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 1349972..1350268 Haemophilus parasuis SH0165 7277508 YP_002475899.1 CDS ubiE NC_011852.1 1350580 1351353 D COG:H;COG2226; ubiquinone/menaquinone biosynthesis methyltransferase 1350580..1351353 Haemophilus parasuis SH0165 7277509 YP_002475900.1 CDS yigP NC_011852.1 1351356 1351982 D similar to unknown protein YigP of Escherichia coli, SCP-2 sterol transfer family containing domain involved in binding sterols; COG:S;COG3165; YigP-like protein 1351356..1351982 Haemophilus parasuis SH0165 7277510 YP_002475901.1 CDS ubiB NC_011852.1 1352044 1353693 D COG:R;COG0661; ubiquinone biosynthesis protein ubiB 1352044..1353693 Haemophilus parasuis SH0165 7277511 YP_002475902.1 CDS mesJ NC_011852.1 1354254 1355522 R COG:D;COG0037; cell-cycle protein MesJ complement(1354254..1355522) Haemophilus parasuis SH0165 7277512 YP_002475903.1 CDS dtd NC_011852.1 1355531 1355965 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(1355531..1355965) Haemophilus parasuis SH0165 7277513 YP_002475904.1 CDS rbn NC_011852.1 1355962 1356810 R RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN complement(1355962..1356810) Haemophilus parasuis SH0165 7277514 YP_002475905.1 CDS HAPS_1377 NC_011852.1 1356856 1356987 D hypothetical protein 1356856..1356987 Haemophilus parasuis SH0165 7277515 YP_002475906.1 CDS espP NC_011852.1 1357029 1359344 R putative extracellular serine protease (autotransporter) complement(1357029..1359344) Haemophilus parasuis SH0165 7277516 YP_002475907.1 CDS purD NC_011852.1 1359565 1360860 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(1359565..1360860) Haemophilus parasuis SH0165 7277517 YP_002475908.1 CDS proA NC_011852.1 1361050 1362300 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1361050..1362300 Haemophilus parasuis SH0165 7277518 YP_002475909.1 CDS espP NC_011852.1 1362485 1364827 D putative extracellular serine protease (autotransporter) 1362485..1364827 Haemophilus parasuis SH0165 7277519 YP_002475910.1 CDS HAPS_1382 NC_011852.1 1365035 1366705 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 1365035..1366705 Haemophilus parasuis SH0165 7277520 YP_002475911.1 CDS gor NC_011852.1 1366802 1368172 D catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 1366802..1368172 Haemophilus parasuis SH0165 7277521 YP_002475912.1 CDS HAPS_1384 NC_011852.1 1368195 1368842 D hypothetical protein 1368195..1368842 Haemophilus parasuis SH0165 7277522 YP_002475913.1 CDS nrdG NC_011852.1 1368873 1369487 R COG:O;COG0602; anaerobic ribonucleotide reductase activating protein NrdG complement(1368873..1369487) Haemophilus parasuis SH0165 7277523 YP_002475914.1 CDS pts NC_011852.1 1369487 1369909 R COG:H;COG0720; 6-pyruvoyl tetrahydrobiopterin synthase complement(1369487..1369909) Haemophilus parasuis SH0165 7277524 YP_002475915.1 CDS queC NC_011852.1 1369902 1370561 R COG:R;COG0603; queuosine biosynthesis protein QueC complement(1369902..1370561) Haemophilus parasuis SH0165 7277525 YP_002475916.1 CDS pirA NC_011852.1 1370843 1371715 D COG:R;COG1741; Pirin-like protein 1370843..1371715 Haemophilus parasuis SH0165 7277526 YP_002475917.1 CDS pepB NC_011852.1 1372066 1373364 D catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 1372066..1373364 Haemophilus parasuis SH0165 7277527 YP_002475918.1 CDS HAPS_1390 NC_011852.1 1373419 1373862 D COG:K;COG1959; transcriptional regulator 1373419..1373862 Haemophilus parasuis SH0165 7277528 YP_002475919.1 CDS tatC NC_011852.1 1373919 1374497 R COG:U;COG0805; twin-arginine translocase subunit, sec-independent protein export TatC complement(1373919..1374497) Haemophilus parasuis SH0165 7277529 YP_002475920.1 CDS tatB NC_011852.1 1374671 1375219 R mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase complement(1374671..1375219) Haemophilus parasuis SH0165 7277530 YP_002475921.1 CDS tatA NC_011852.1 1375223 1375447 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(1375223..1375447) Haemophilus parasuis SH0165 7277531 YP_002475922.1 CDS yidC NC_011852.1 1375790 1377430 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 1375790..1377430 Haemophilus parasuis SH0165 7277532 YP_002475923.1 CDS smtA NC_011852.1 1377440 1378228 D COG:QR;COG0500; SAM-dependent methyltransferase, SmtA 1377440..1378228 Haemophilus parasuis SH0165 7277533 YP_002475924.1 CDS omp18/16 NC_011852.1 1378272 1378784 D outer membrane protein 18/16 1378272..1378784 Haemophilus parasuis SH0165 7277534 YP_002475925.1 CDS xerD NC_011852.1 1385263 1386156 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1385263..1386156 Haemophilus parasuis SH0165 7277543 YP_002475926.1 CDS HAPS_1406 NC_011852.1 1386158 1386451 D hypothetical protein 1386158..1386451 Haemophilus parasuis SH0165 7277544 YP_002475927.1 CDS adpP NC_011852.1 1386530 1387168 R COG:LR;COG0494; ADP-ribose pyrophosphatase complement(1386530..1387168) Haemophilus parasuis SH0165 7277545 YP_002475928.1 CDS psiE NC_011852.1 1387178 1387597 R COG:S;COG3223; phosphate-starvation-inducible protein PsiE complement(1387178..1387597) Haemophilus parasuis SH0165 7277546 YP_002475929.1 CDS yieE NC_011852.1 1387605 1388336 R COG:H;COG2091; phosphopantetheinyl transferase complement(1387605..1388336) Haemophilus parasuis SH0165 7277547 YP_002475930.1 CDS rplL NC_011852.1 1388428 1388796 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(1388428..1388796) Haemophilus parasuis SH0165 7277548 YP_002475931.1 CDS rplJ NC_011852.1 1388854 1389345 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(1388854..1389345) Haemophilus parasuis SH0165 7277549 YP_002475932.1 CDS coaD NC_011852.1 1389746 1390213 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(1389746..1390213) Haemophilus parasuis SH0165 7277550 YP_002475933.1 CDS kdtA NC_011852.1 1390215 1391498 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(1390215..1391498) Haemophilus parasuis SH0165 7277551 YP_002475934.1 CDS dnaE NC_011852.1 1391508 1394984 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(1391508..1394984) Haemophilus parasuis SH0165 7277553 YP_002475935.1 CDS HAPS_1415 NC_011852.1 1395006 1395518 R hypothetical protein complement(1395006..1395518) Haemophilus parasuis SH0165 7277160 YP_002475936.1 CDS HAPS_1416 NC_011852.1 1395519 1396454 R putative amino-acid ABC transporter ATP-binding protein complement(1395519..1396454) Haemophilus parasuis SH0165 7277161 YP_002475937.1 CDS yigQ NC_011852.1 1396565 1397632 R COG:R;COG0795; permease complement(1396565..1397632) Haemophilus parasuis SH0165 7277162 YP_002475938.1 CDS yjgP NC_011852.1 1397629 1398729 R COG:R;COG0795; permease complement(1397629..1398729) Haemophilus parasuis SH0165 7277163 YP_002475939.1 CDS pepA NC_011852.1 1399076 1400572 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1399076..1400572 Haemophilus parasuis SH0165 7277164 YP_002475940.1 CDS prtC NC_011852.1 1400773 1402152 D COG:O;COG0826; collagenase prtC/related protease involved in cellular process and singaling 1400773..1402152 Haemophilus parasuis SH0165 7277165 YP_002475941.1 CDS pepO NC_011852.1 1402291 1404318 D COG:O;COG3590; neutral endopeptidase 1402291..1404318 Haemophilus parasuis SH0165 7277166 YP_002475942.1 CDS menB NC_011852.1 1404422 1405279 D catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 1404422..1405279 Haemophilus parasuis SH0165 7277167 YP_002475943.1 CDS azoR NC_011852.1 1407004 1407591 R COG:I;COG1182; FMN-dependent NADH-azoreductase complement(1407004..1407591) Haemophilus parasuis SH0165 7277170 YP_002475944.1 CDS HAPS_1427 NC_011852.1 1408269 1408436 R hypothetical protein complement(1408269..1408436) Haemophilus parasuis SH0165 7277172 YP_002475945.1 CDS rplQ NC_011852.1 1408656 1409042 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(1408656..1409042) Haemophilus parasuis SH0165 7277173 YP_002475946.1 CDS rpoA NC_011852.1 1409078 1410067 R COG:K;COG0202; DNA-directed RNA polymerase subunit alpha complement(1409078..1410067) Haemophilus parasuis SH0165 7277174 YP_002475947.1 CDS rpsD NC_011852.1 1410099 1410719 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(1410099..1410719) Haemophilus parasuis SH0165 7277175 YP_002475948.1 CDS rpsK NC_011852.1 1410748 1411137 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(1410748..1411137) Haemophilus parasuis SH0165 7277176 YP_002475949.1 CDS rpsM NC_011852.1 1411154 1411510 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(1411154..1411510) Haemophilus parasuis SH0165 7277177 YP_002475950.1 CDS rpmJ NC_011852.1 1411649 1411762 R COG:J;COG0257; 50S ribosomal protein L36 complement(1411649..1411762) Haemophilus parasuis SH0165 7277178 YP_002475951.1 CDS secY NC_011852.1 1411787 1413109 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(1411787..1413109) Haemophilus parasuis SH0165 7277179 YP_002475952.1 CDS rplO NC_011852.1 1413113 1413547 R late assembly protein; 50S ribosomal protein L15 complement(1413113..1413547) Haemophilus parasuis SH0165 7277180 YP_002475953.1 CDS rpmD NC_011852.1 1413552 1413731 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(1413552..1413731) Haemophilus parasuis SH0165 7277181 YP_002475954.1 CDS rpsE NC_011852.1 1413738 1414238 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(1413738..1414238) Haemophilus parasuis SH0165 7277182 YP_002475955.1 CDS rplR NC_011852.1 1414253 1414606 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(1414253..1414606) Haemophilus parasuis SH0165 7277183 YP_002475956.1 CDS rplF NC_011852.1 1414621 1415154 R COG:J;COG0097; 50S ribosomal protein L6 complement(1414621..1415154) Haemophilus parasuis SH0165 7277184 YP_002475957.1 CDS rpsH NC_011852.1 1415171 1415563 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(1415171..1415563) Haemophilus parasuis SH0165 7277185 YP_002475958.1 CDS rpsN NC_011852.1 1415600 1415905 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(1415600..1415905) Haemophilus parasuis SH0165 7277186 YP_002475959.1 CDS rplE NC_011852.1 1415917 1416456 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(1415917..1416456) Haemophilus parasuis SH0165 7277187 YP_002475960.1 CDS rplX NC_011852.1 1416474 1416785 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(1416474..1416785) Haemophilus parasuis SH0165 7277188 YP_002475961.1 CDS rplN NC_011852.1 1416798 1417112 R COG:J;COG0093; 50S ribosomal protein L14 complement(1416798..1417112) Haemophilus parasuis SH0165 7277189 YP_002475962.1 CDS HAPS_1448 NC_011852.1 1422558 1424804 R hypothetical protein complement(1422558..1424804) Haemophilus parasuis SH0165 7277193 YP_002475963.1 CDS HAPS_1449 NC_011852.1 1424977 1425579 R hypothetical protein complement(1424977..1425579) Haemophilus parasuis SH0165 7277194 YP_002475964.1 CDS vanY NC_011852.1 1425715 1426401 D COG:M;COG1876; peptidase M15B 1425715..1426401 Haemophilus parasuis SH0165 7277195 YP_002475965.1 CDS yejF NC_011852.1 1426427 1427836 R COG:R;COG1123; ABC transporter ATP-binding protein complement(1426427..1427836) Haemophilus parasuis SH0165 7277196 YP_002475966.1 CDS nikC NC_011852.1 1427907 1428689 R COG:EP;COG1173; Nickel transport system permease protein nikC complement(1427907..1428689) Haemophilus parasuis SH0165 7277197 YP_002475967.1 CDS nikB NC_011852.1 1428686 1429465 R COG:EP;COG0601; Nickel transport system permease protein nikB complement(1428686..1429465) Haemophilus parasuis SH0165 7277198 YP_002475968.1 CDS nikA NC_011852.1 1429737 1431320 R COG:E;COG0747; Nickel-binding periplasmic protein nikA complement(1429737..1431320) Haemophilus parasuis SH0165 7277199 YP_002475969.1 CDS modE NC_011852.1 1431439 1432206 R COG:R;COG2005; molybdenum transport protein complement(1431439..1432206) Haemophilus parasuis SH0165 7277200 YP_002475970.1 CDS modA NC_011852.1 1432450 1433235 D COG:P;COG0725; molybdate-binding periplasmic protein, ABC transporter 1432450..1433235 Haemophilus parasuis SH0165 7277201 YP_002475971.1 CDS HAPS_1457 NC_011852.1 1433397 1433921 R hypothetical protein complement(1433397..1433921) Haemophilus parasuis SH0165 7277202 YP_002475972.1 CDS thyA NC_011852.1 1434011 1434862 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 1434011..1434862 Haemophilus parasuis SH0165 7277203 YP_002475973.1 CDS HAPS_1462 NC_011852.1 1435412 1435996 R hypothetical protein complement(1435412..1435996) Haemophilus parasuis SH0165 7277207 YP_002475974.1 CDS purC NC_011852.1 1436173 1437030 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1436173..1437030 Haemophilus parasuis SH0165 7277208 YP_002475975.1 CDS HAPS_1464 NC_011852.1 1437258 1437932 D COG:S;COG1738; hypothetical protein 1437258..1437932 Haemophilus parasuis SH0165 7277209 YP_002475976.1 CDS pepD NC_011852.1 1437976 1439430 R COG:E;COG2195; aminoacyl-histidine dipeptidase complement(1437976..1439430) Haemophilus parasuis SH0165 7277210 YP_002475977.1 CDS gpt NC_011852.1 1439611 1440090 D catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1439611..1440090 Haemophilus parasuis SH0165 7277211 YP_002475978.1 CDS HAPS_1467 NC_011852.1 1440186 1441157 R COG:L;COG3547; ISNme5, family IS110 complement(1440186..1441157) Haemophilus parasuis SH0165 7277212 YP_002475979.1 CDS HAPS_1468 NC_011852.1 1441414 1442124 D COG:S;COG4947; putative esterase 1441414..1442124 Haemophilus parasuis SH0165 7277213 YP_002475980.1 CDS lysA NC_011852.1 1442162 1443421 D COG:E;COG0019; diaminopimelate decarboxylase 1442162..1443421 Haemophilus parasuis SH0165 7277214 YP_002475981.1 CDS mtr NC_011852.1 1443440 1444654 D COG:E;COG0814; tryptophan-specific transport protein 1443440..1444654 Haemophilus parasuis SH0165 7277215 YP_002475982.1 CDS mutS NC_011852.1 1444736 1447297 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1444736..1447297 Haemophilus parasuis SH0165 7277216 YP_002475983.1 CDS HAPS_1472 NC_011852.1 1447576 1448316 D putative metal-activated pyridoxal enzyme 1447576..1448316 Haemophilus parasuis SH0165 7277217 YP_002475984.1 CDS htrA NC_011852.1 1448494 1449873 R COG:O;COG0265; periplasmic serine protease do/hhoA-like complement(1448494..1449873) Haemophilus parasuis SH0165 7277218 YP_002475985.1 CDS cstA NC_011852.1 1450176 1451774 D COG:T;COG1966; carbon starvation protein A, membrane protein 1450176..1451774 Haemophilus parasuis SH0165 7277219 YP_002475986.1 CDS prmA NC_011852.1 1451979 1452863 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase complement(1451979..1452863) Haemophilus parasuis SH0165 7277158 YP_002475987.1 CDS secB NC_011852.1 1454074 1454580 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(1454074..1454580) Haemophilus parasuis SH0165 7277220 YP_002475988.1 CDS HAPS_1478 NC_011852.1 1454609 1455061 R COG:P;COG0607; putative rhodanese-related sulfurtransferase complement(1454609..1455061) Haemophilus parasuis SH0165 7277882 YP_002475989.1 CDS tig NC_011852.1 1455164 1456459 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(1455164..1456459) Haemophilus parasuis SH0165 7277883 YP_002475990.1 CDS HAPS_1480 NC_011852.1 1457073 1457243 R hypothetical protein complement(1457073..1457243) Haemophilus parasuis SH0165 7277884 YP_002475991.1 CDS pncB NC_011852.1 1458748 1459932 D nicotinate phosphoribosyltransferase 1458748..1459932 Haemophilus parasuis SH0165 7277887 YP_002475992.1 CDS map NC_011852.1 1460012 1460818 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1460012..1460818) Haemophilus parasuis SH0165 7277888 YP_002475993.1 CDS glmS NC_011852.1 1460920 1462752 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(1460920..1462752) Haemophilus parasuis SH0165 7277889 YP_002475994.1 CDS HAPS_1486 NC_011852.1 1462786 1463472 R COG:KG;COG1349; sugar metabolism within DeoR family transcriptional regulator complement(1462786..1463472) Haemophilus parasuis SH0165 7277890 YP_002475995.1 CDS HAPS_1487 NC_011852.1 1463680 1464003 R COG:E;COG1687; branched-chain amino acid transport complement(1463680..1464003) Haemophilus parasuis SH0165 7277891 YP_002475996.1 CDS HAPS_1489 NC_011852.1 1466074 1466259 R hypothetical protein complement(1466074..1466259) Haemophilus parasuis SH0165 7277893 YP_002475997.1 CDS ygiW NC_011852.1 1466642 1467043 R COG:S;COG3111; putative outer membrane protein complement(1466642..1467043) Haemophilus parasuis SH0165 7277895 YP_002475998.1 CDS recG NC_011852.1 1467327 1469408 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(1467327..1469408) Haemophilus parasuis SH0165 7277896 YP_002475999.1 CDS xseA NC_011852.1 1469521 1470726 R COG:S;COG2850; exodeoxyribonuclease VII large subunit complement(1469521..1470726) Haemophilus parasuis SH0165 7277897 YP_002476000.1 CDS birA NC_011852.1 1470802 1471590 R COG:S;COG4285; biotin apo-protein ligase complement(1470802..1471590) Haemophilus parasuis SH0165 7277898 YP_002476001.1 CDS bioY NC_011852.1 1471674 1472240 D COG:R;COG1268; biotin biosynthesis protein BioY 1471674..1472240 Haemophilus parasuis SH0165 7277899 YP_002476002.1 CDS HAPS_1496 NC_011852.1 1472371 1473180 R COG:R;COG0561; Cof-like, HAD superfamily hydrolase complement(1472371..1473180) Haemophilus parasuis SH0165 7277900 YP_002476003.1 CDS comF NC_011852.1 1473304 1473981 D COG:R;COG1040; competence protein F 1473304..1473981 Haemophilus parasuis SH0165 7277901 YP_002476004.1 CDS tatD NC_011852.1 1473967 1474767 R COG:L;COG0084; Mg-dependent deoxyribonuclease complement(1473967..1474767) Haemophilus parasuis SH0165 7277902 YP_002476005.1 CDS vacB NC_011852.1 1474780 1477086 R COG:K;COG0557; ribonuclease R complement(1474780..1477086) Haemophilus parasuis SH0165 7277903 YP_002476006.1 CDS dcuB NC_011852.1 1477503 1478720 D functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 1477503..1478720 Haemophilus parasuis SH0165 7277904 YP_002476007.1 CDS dnaA NC_011852.1 1478942 1480276 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1478942..1480276 Haemophilus parasuis SH0165 7277905 YP_002476008.1 CDS dnaN NC_011852.1 1480286 1481389 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1480286..1481389 Haemophilus parasuis SH0165 7277906 YP_002476009.1 CDS HAPS_1503 NC_011852.1 1481421 1481954 D COG:S;COG0762; integral membrane protein 1481421..1481954 Haemophilus parasuis SH0165 7277907 YP_002476010.1 CDS HAPS_1504 NC_011852.1 1481954 1482247 D COG:S;COG1872; hypothetical protein 1481954..1482247 Haemophilus parasuis SH0165 7277908 YP_002476011.1 CDS HAPS_1505 NC_011852.1 1482343 1483122 D COG:R;COG4137; putative ABC-transport permease 1482343..1483122 Haemophilus parasuis SH0165 7277909 YP_002476012.1 CDS corB NC_011852.1 1483304 1484476 D COG:P;COG4536; putative Mg2+ and Co2+ transporter CorB 1483304..1484476 Haemophilus parasuis SH0165 7277910 YP_002476013.1 CDS ffh NC_011852.1 1484885 1486267 R COG:U;COG0541; signal recognition particle GTPase complement(1484885..1486267) Haemophilus parasuis SH0165 7277912 YP_002476014.1 CDS mioC NC_011852.1 1486633 1487076 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 1486633..1487076 Haemophilus parasuis SH0165 7277913 YP_002476015.1 CDS HAPS_1510 NC_011852.1 1487367 1487480 D hypothetical protein 1487367..1487480 Haemophilus parasuis SH0165 7277914 YP_002476016.1 CDS cysE NC_011852.1 1494419 1495225 R catalyzes the O-acetylation of serine; serine acetyltransferase complement(1494419..1495225) Haemophilus parasuis SH0165 7277916 YP_002476017.1 CDS gpsA NC_011852.1 1495228 1496238 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(1495228..1496238) Haemophilus parasuis SH0165 7277917 YP_002476018.1 CDS arcA NC_011852.1 1496577 1497293 R COG:TK;COG0745; two-component response regulator complement(1496577..1497293) Haemophilus parasuis SH0165 7277918 YP_002476019.1 CDS cdd NC_011852.1 1497471 1498364 R Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase complement(1497471..1498364) Haemophilus parasuis SH0165 7277919 YP_002476020.1 CDS folB NC_011852.1 1498463 1498810 R COG:H;COG1539; dihydroneopterin aldolase complement(1498463..1498810) Haemophilus parasuis SH0165 7277920 YP_002476021.1 CDS plsY NC_011852.1 1498887 1499498 D COG:S;COG0344; glycerol-3-phosphate acyltransferase PlsY 1498887..1499498 Haemophilus parasuis SH0165 7277921 YP_002476022.1 CDS gidB NC_011852.1 1499582 1500193 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(1499582..1500193) Haemophilus parasuis SH0165 7277922 YP_002476023.1 CDS ppnK NC_011852.1 1500229 1500666 R inorganic polyphosphate/ATP-NAD kinase complement(1500229..1500666) Haemophilus parasuis SH0165 7277923 YP_002476024.1 CDS gidA NC_011852.1 1500967 1502778 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(1500967..1502778) Haemophilus parasuis SH0165 7277924 YP_002476025.1 CDS HAPS_1521 NC_011852.1 1503105 1503242 D hypothetical protein 1503105..1503242 Haemophilus parasuis SH0165 7277925 YP_002476026.1 CDS fucR NC_011852.1 1503379 1504125 D COG:KG;COG1349; L-fucose operon activator 1503379..1504125 Haemophilus parasuis SH0165 7277926 YP_002476027.1 CDS HAPS_1523 NC_011852.1 1504224 1504883 R COG:S;COG4380; putative lipoprotein complement(1504224..1504883) Haemophilus parasuis SH0165 7277927 YP_002476028.1 CDS HAPS_1524 NC_011852.1 1504893 1505240 R COG:S;COG4259; putative lipoprotein, periplasmic protein complement(1504893..1505240) Haemophilus parasuis SH0165 7277928 YP_002476029.1 CDS csgG NC_011852.1 1505250 1505924 R COG:M;COG1462; putative lipoprotein, curli production assembly/transport component CsgG complement(1505250..1505924) Haemophilus parasuis SH0165 7277929 YP_002476030.1 CDS fucI NC_011852.1 1506241 1508007 D catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose; L-fucose isomerase 1506241..1508007 Haemophilus parasuis SH0165 7277930 YP_002476031.1 CDS fucK NC_011852.1 1508148 1509584 D COG:G;COG1070; L-fuculokinase 1508148..1509584 Haemophilus parasuis SH0165 7277931 YP_002476032.1 CDS fucU NC_011852.1 1509804 1510244 D COG:G;COG4154; fucose operon FucU protein 1509804..1510244 Haemophilus parasuis SH0165 7277932 YP_002476033.1 CDS fucA NC_011852.1 1510254 1510907 D catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose phosphate aldolase 1510254..1510907 Haemophilus parasuis SH0165 7277933 YP_002476034.1 CDS rpiR NC_011852.1 1510956 1511786 R COG:K;COG1737; RpiR family transcriptional regulator complement(1510956..1511786) Haemophilus parasuis SH0165 7277934 YP_002476035.1 CDS iolC NC_011852.1 1511908 1513824 R COG:G;COG0524; myoinositol catabolism protein, sugar kinase complement(1511908..1513824) Haemophilus parasuis SH0165 7277935 YP_002476036.1 CDS iolD NC_011852.1 1514082 1516016 D COG:E;COG3962; myoinositol catabolism protein, acetolactate synthase 1514082..1516016 Haemophilus parasuis SH0165 7277936 YP_002476037.1 CDS iolE NC_011852.1 1516100 1516996 D COG:G;COG1082; myoinositol catabolism protein with xylose isomerase domain (2-keto-myo-inositol dehydratase) 1516100..1516996 Haemophilus parasuis SH0165 7277937 YP_002476038.1 CDS iolG NC_011852.1 1516998 1518008 D COG:R;COG0673; myoinositol 2-dehydrogenase with oxidoreductase domain 1516998..1518008 Haemophilus parasuis SH0165 7277938 YP_002476039.1 CDS celB NC_011852.1 1518163 1519509 R COG:G;COG1455; PTS system cellobiose-specific transporter subunit IIC complement(1518163..1519509) Haemophilus parasuis SH0165 7277939 YP_002476040.1 CDS alfA NC_011852.1 1519511 1520848 R COG:G;COG3669; alpha-L-fucosidase complement(1519511..1520848) Haemophilus parasuis SH0165 7277940 YP_002476041.1 CDS HAPS_1537 NC_011852.1 1520925 1522058 R COG:R;COG0673; dehydrogenase complement(1520925..1522058) Haemophilus parasuis SH0165 7277941 YP_002476042.1 CDS rbsC NC_011852.1 1522153 1522815 R COG:G;COG1172; fused D-ribose ABC transporter permease/membrane component complement(1522153..1522815) Haemophilus parasuis SH0165 7277942 YP_002476043.1 CDS rbsA NC_011852.1 1523151 1524665 R COG:G;COG1129; fused D-ribose ABC transporter ATP-binding protein complement(1523151..1524665) Haemophilus parasuis SH0165 7277943 YP_002476044.1 CDS rbsD NC_011852.1 1524777 1525709 R COG:G;COG1879; fused D-ribose ABC transporter substrate-binding protein complement(1524777..1525709) Haemophilus parasuis SH0165 7277944 YP_002476045.1 CDS HAPS_1541 NC_011852.1 1526026 1527537 R COG:C;COG1012; methylmalonate semialdehyde dehydrogenase complement(1526026..1527537) Haemophilus parasuis SH0165 7277945 YP_002476046.1 CDS iolB NC_011852.1 1527757 1528572 D COG:G;COG3718; myo-inositol catabolism IolB domain-containing protein 1527757..1528572 Haemophilus parasuis SH0165 7277946 YP_002476047.1 CDS HAPS_1545 NC_011852.1 1529203 1529466 R COG:P;COG2168; protein involved in oxidation of intracellular sulfur complement(1529203..1529466) Haemophilus parasuis SH0165 7277949 YP_002476048.1 CDS dsrF NC_011852.1 1529476 1529847 R COG:P;COG2923; putative sulfur oxidation protein DsrF complement(1529476..1529847) Haemophilus parasuis SH0165 7277950 YP_002476049.1 CDS tusD NC_011852.1 1529849 1530202 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD complement(1529849..1530202) Haemophilus parasuis SH0165 7277951 YP_002476050.1 CDS yheO NC_011852.1 1530202 1530858 R COG:S;COG2964; YheO domain-containing protein complement(1530202..1530858) Haemophilus parasuis SH0165 7277952 YP_002476051.1 CDS fkpA NC_011852.1 1530926 1531645 R COG:O;COG0545; FKBP-type peptidyl-prolyl cis-trans isomerase, macrophage infectivity protein complement(1530926..1531645) Haemophilus parasuis SH0165 7277953 YP_002476052.1 CDS slyX NC_011852.1 1531738 1531962 D COG:S;COG2900; slyX-like protein 1531738..1531962 Haemophilus parasuis SH0165 7277954 YP_002476053.1 CDS HAPS_1551 NC_011852.1 1531999 1532664 D COG:OC;COG0526; thiol disulfide oxidoreductase 1531999..1532664 Haemophilus parasuis SH0165 7277955 YP_002476054.1 CDS mtn NC_011852.1 1532661 1533353 D COG:F;COG0775; MTA/SAH nucleosidase 1532661..1533353 Haemophilus parasuis SH0165 7277956 YP_002476055.1 CDS rimO NC_011852.1 1533518 1534849 D catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 1533518..1534849 Haemophilus parasuis SH0165 7277957 YP_002476056.1 CDS glyQ NC_011852.1 1535272 1536177 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1535272..1536177 Haemophilus parasuis SH0165 7277958 YP_002476057.1 CDS HAPS_1555 NC_011852.1 1536231 1536497 D COG:O;COG4545; glutaredoxin-like protein 1536231..1536497 Haemophilus parasuis SH0165 7277959 YP_002476058.1 CDS HAPS_1556 NC_011852.1 1536579 1537211 D hypothetical protein 1536579..1537211 Haemophilus parasuis SH0165 7277960 YP_002476059.1 CDS HAPS_1557 NC_011852.1 1537371 1537742 D COG:S;COG2852; hypothetical protein 1537371..1537742 Haemophilus parasuis SH0165 7277961 YP_002476060.1 CDS HAPS_1558 NC_011852.1 1537987 1538460 D putative phage associated protein 1537987..1538460 Haemophilus parasuis SH0165 7277962 YP_002476061.1 CDS glyS NC_011852.1 1538492 1540561 D glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1538492..1540561 Haemophilus parasuis SH0165 7277007 YP_002476062.1 CDS bioA NC_011852.1 1540614 1541900 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1540614..1541900 Haemophilus parasuis SH0165 7278371 YP_002476063.1 CDS bioF NC_011852.1 1541893 1543035 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1541893..1543035 Haemophilus parasuis SH0165 7278372 YP_002476064.1 CDS bioD NC_011852.1 1543048 1543713 D COG:S;COG2830; dithiobiotin synthetase 1543048..1543713 Haemophilus parasuis SH0165 7278373 YP_002476065.1 CDS bioC NC_011852.1 1543704 1544477 D COG:QR;COG0500; biotin synthesis protein 1543704..1544477 Haemophilus parasuis SH0165 7278374 YP_002476066.1 CDS bioD NC_011852.1 1544467 1545111 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1544467..1545111 Haemophilus parasuis SH0165 7278375 YP_002476067.1 CDS HAPS_1565 NC_011852.1 1545134 1545424 D hypothetical protein 1545134..1545424 Haemophilus parasuis SH0165 7278376 YP_002476068.1 CDS xerC NC_011852.1 1545548 1546333 D COG:L;COG4973; putative site-specific tyrosine recombinase XerC 1545548..1546333 Haemophilus parasuis SH0165 7278377 YP_002476069.1 CDS rpoH NC_011852.1 1546391 1547338 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 1546391..1547338 Haemophilus parasuis SH0165 7278378 YP_002476070.1 CDS cjrC NC_011852.1 1547610 1549853 R COG:P;COG1629; putative outer membrane colicin Js receptor complement(1547610..1549853) Haemophilus parasuis SH0165 7278379 YP_002476071.1 CDS cjrA NC_011852.1 1549869 1550669 R COG:S;COG3016; putative iron-regulated lipoprotein complement(1549869..1550669) Haemophilus parasuis SH0165 7278380 YP_002476072.1 CDS hmuV NC_011852.1 1550777 1551565 R with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit complement(1550777..1551565) Haemophilus parasuis SH0165 7278381 YP_002476073.1 CDS hmuU NC_011852.1 1551565 1552551 R COG:P;COG0609; hemin transport system permease HmuU complement(1551565..1552551) Haemophilus parasuis SH0165 7278382 YP_002476074.1 CDS hmuT NC_011852.1 1552551 1553387 R COG:P;COG4558; hemin transport system periplasmic protein HmuT complement(1552551..1553387) Haemophilus parasuis SH0165 7278383 YP_002476075.1 CDS smf NC_011852.1 1553440 1554567 R COG:LU;COG0758; Smf protein, Rossmann fold nucleotide-binding protein involved in DNA uptake complement(1553440..1554567) Haemophilus parasuis SH0165 7278384 YP_002476076.1 CDS def NC_011852.1 1554902 1555414 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1554902..1555414 Haemophilus parasuis SH0165 7278385 YP_002476077.1 CDS rfaD NC_011852.1 1555426 1556352 D catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-manno-heptose-6-epimerase 1555426..1556352 Haemophilus parasuis SH0165 7278386 YP_002476078.1 CDS HAPS_1576 NC_011852.1 1556444 1556587 D hypothetical protein 1556444..1556587 Haemophilus parasuis SH0165 7278387 YP_002476079.1 CDS HAPS_1578 NC_011852.1 1557656 1557814 R hypothetical protein complement(1557656..1557814) Haemophilus parasuis SH0165 7278389 YP_002476080.1 CDS HAPS_1579 NC_011852.1 1558035 1558427 R COG:K;COG1396; XRE family transcriptional regulator complement(1558035..1558427) Haemophilus parasuis SH0165 7278390 YP_002476081.1 CDS HAPS_1580 NC_011852.1 1558455 1558724 R COG:JD;COG2026; bacteriophage protein/plasmid stabilization system protein complement(1558455..1558724) Haemophilus parasuis SH0165 7278391 YP_002476082.1 CDS HAPS_1581 NC_011852.1 1559388 1561574 R COG:L;COG5519; putative prophage primase complement(1559388..1561574) Haemophilus parasuis SH0165 7278392 YP_002476083.1 CDS HAPS_1583 NC_011852.1 1561947 1562360 R phage small subunit terminase complement(1561947..1562360) Haemophilus parasuis SH0165 7278394 YP_002476084.1 CDS HAPS_1584 NC_011852.1 1562348 1562698 R hypothetical protein complement(1562348..1562698) Haemophilus parasuis SH0165 7278395 YP_002476085.1 CDS HAPS_1585 NC_011852.1 1562809 1562925 R hypothetical protein complement(1562809..1562925) Haemophilus parasuis SH0165 7278396 YP_002476086.1 CDS HAPS_1586 NC_011852.1 1563080 1563406 R hypothetical protein complement(1563080..1563406) Haemophilus parasuis SH0165 7278397 YP_002476087.1 CDS HAPS_1587 NC_011852.1 1563990 1565240 R COG:L;COG0582; phage integrase family site specific recombinase complement(1563990..1565240) Haemophilus parasuis SH0165 7278398 YP_002476088.1 CDS selA NC_011852.1 1565700 1567085 D catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 1565700..1567085 Haemophilus parasuis SH0165 7278400 YP_002476089.1 CDS selB NC_011852.1 1567082 1568932 D COG:J;COG3276; selenocysteine-specific elongation factor 1567082..1568932 Haemophilus parasuis SH0165 7278401 YP_002476090.1 CDS HAPS_1591 NC_011852.1 1569378 1569638 R COG:K;COG1396; XRE family transcriptional regulator complement(1569378..1569638) Haemophilus parasuis SH0165 7278402 YP_002476091.1 CDS rpoB NC_011852.1 1570461 1574489 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1570461..1574489 Haemophilus parasuis SH0165 7278403 YP_002476092.1 CDS HAPS_1593 NC_011852.1 1574575 1574691 D hypothetical protein 1574575..1574691 Haemophilus parasuis SH0165 7278404 YP_002476093.1 CDS rpoC NC_011852.1 1574675 1578958 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1574675..1578958 Haemophilus parasuis SH0165 7278405 YP_002476094.1 CDS recF NC_011852.1 1579244 1580329 R Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F complement(1579244..1580329) Haemophilus parasuis SH0165 7278406 YP_002476095.1 CDS HAPS_1596 NC_011852.1 1580372 1580719 R COG:S;COG3171; hypothetical protein complement(1580372..1580719) Haemophilus parasuis SH0165 7278407 YP_002476096.1 CDS trmB NC_011852.1 1580744 1581493 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1580744..1581493) Haemophilus parasuis SH0165 7278408 YP_002476097.1 CDS fabH NC_011852.1 1581509 1582426 R COG:I;COG0332; 3-oxoacyl-ACP synthase complement(1581509..1582426) Haemophilus parasuis SH0165 7278409 YP_002476098.1 CDS HAPS_1599 NC_011852.1 1582550 1583521 R COG:L;COG3547; ISNme5, family IS110 complement(1582550..1583521) Haemophilus parasuis SH0165 7278410 YP_002476099.1 CDS HAPS_1600 NC_011852.1 1584072 1585043 D COG:L;COG3547; ISNme5, family IS110 1584072..1585043 Haemophilus parasuis SH0165 7278411 YP_002476100.1 CDS pyrAB NC_011852.1 1585159 1586337 R carbamoylphosphate synthase large subunit complement(1585159..1586337) Haemophilus parasuis SH0165 7278412 YP_002476101.1 CDS fumC NC_011852.1 1586519 1587913 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(1586519..1587913) Haemophilus parasuis SH0165 7278413 YP_002476102.1 CDS tfoX NC_011852.1 1588060 1588698 R DNA transformation protein, regulator of competence-specific genes complement(1588060..1588698) Haemophilus parasuis SH0165 7278414 YP_002476103.1 CDS HAPS_1604 NC_011852.1 1588846 1588980 R hypothetical protein complement(1588846..1588980) Haemophilus parasuis SH0165 7278415 YP_002476104.1 CDS rpsJ NC_011852.1 1589157 1589468 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1589157..1589468 Haemophilus parasuis SH0165 7278416 YP_002476105.1 CDS rplC NC_011852.1 1589485 1590111 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1589485..1590111 Haemophilus parasuis SH0165 7278417 YP_002476106.1 CDS rplD NC_011852.1 1590127 1590729 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1590127..1590729 Haemophilus parasuis SH0165 7278418 YP_002476107.1 CDS rplW NC_011852.1 1590726 1591031 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1590726..1591031 Haemophilus parasuis SH0165 7278419 YP_002476108.1 CDS rplB NC_011852.1 1591052 1591873 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1591052..1591873 Haemophilus parasuis SH0165 7278420 YP_002476109.1 CDS rpsS NC_011852.1 1591902 1592177 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1591902..1592177 Haemophilus parasuis SH0165 7278421 YP_002476110.1 CDS rplV NC_011852.1 1592188 1592520 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1592188..1592520 Haemophilus parasuis SH0165 7278422 YP_002476111.1 CDS rpsC NC_011852.1 1592538 1593242 D COG:J;COG0092; 30S ribosomal protein S3 1592538..1593242 Haemophilus parasuis SH0165 7278423 YP_002476112.1 CDS rplP NC_011852.1 1593255 1593665 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1593255..1593665 Haemophilus parasuis SH0165 7278424 YP_002476113.1 CDS rpmC NC_011852.1 1593665 1593856 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1593665..1593856 Haemophilus parasuis SH0165 7278425 YP_002476114.1 CDS rpsQ NC_011852.1 1593856 1594110 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1593856..1594110 Haemophilus parasuis SH0165 7278426 YP_002476115.1 CDS nanH NC_011852.1 1594826 1596832 D COG:G;COG4409; neuraminidase/exo-alpha-sialidase nanH 1594826..1596832 Haemophilus parasuis SH0165 7278427 YP_002476116.1 CDS HAPS_1618 NC_011852.1 1597394 1599190 R COG:P;COG0471; di- and tricarboxylate transporter/DASS family divalent anion:sodium (Na+) symporter complement(1597394..1599190) Haemophilus parasuis SH0165 7278429 YP_002476117.1 CDS atpI NC_011852.1 1599680 1600066 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 1599680..1600066 Haemophilus parasuis SH0165 7278430 YP_002476118.1 CDS atpB NC_011852.1 1600095 1600886 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 1600095..1600886 Haemophilus parasuis SH0165 7278431 YP_002476119.1 CDS atpE NC_011852.1 1601027 1601281 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 1601027..1601281 Haemophilus parasuis SH0165 7278432 YP_002476120.1 CDS atpF NC_011852.1 1601343 1601813 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 1601343..1601813 Haemophilus parasuis SH0165 7278433 YP_002476121.1 CDS atpH NC_011852.1 1601827 1602360 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 1601827..1602360 Haemophilus parasuis SH0165 7278434 YP_002476122.1 CDS atpA NC_011852.1 1602373 1603914 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 1602373..1603914 Haemophilus parasuis SH0165 7278435 YP_002476123.1 CDS atpG NC_011852.1 1603937 1604803 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 1603937..1604803 Haemophilus parasuis SH0165 7278436 YP_002476124.1 CDS atpD NC_011852.1 1604824 1606197 D COG:C;COG0055; F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase, F(1) subunit beta 1604824..1606197 Haemophilus parasuis SH0165 7278437 YP_002476125.1 CDS atpC NC_011852.1 1606224 1606640 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 1606224..1606640 Haemophilus parasuis SH0165 7278438 YP_002476126.1 CDS rbsR NC_011852.1 1606715 1607704 D COG:K;COG1609; ribose operon repressor 1606715..1607704 Haemophilus parasuis SH0165 7278439 YP_002476127.1 CDS rbsD NC_011852.1 1607819 1608238 D cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 1607819..1608238 Haemophilus parasuis SH0165 7278440 YP_002476128.1 CDS rbsA NC_011852.1 1608248 1609747 D with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein 1608248..1609747 Haemophilus parasuis SH0165 7278441 YP_002476129.1 CDS rbsC NC_011852.1 1609759 1610718 D functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 1609759..1610718 Haemophilus parasuis SH0165 7278442 YP_002476130.1 CDS rbsB NC_011852.1 1610759 1611631 D periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 1610759..1611631 Haemophilus parasuis SH0165 7278443 YP_002476131.1 CDS rbsK NC_011852.1 1611704 1612627 D catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 1611704..1612627 Haemophilus parasuis SH0165 7278444 YP_002476132.1 CDS glnA NC_011852.1 1613112 1614374 D COG:E;COG0174; glutamine synthetase 1613112..1614374 Haemophilus parasuis SH0165 7278445 YP_002476133.1 CDS HAPS_1636 NC_011852.1 1615430 1615624 D hypothetical protein 1615430..1615624 Haemophilus parasuis SH0165 7278447 YP_002476134.1 CDS dltE NC_011852.1 1615601 1616251 R COG:R;COG0300; short-chain dehydrogenase/reductase SDR complement(1615601..1616251) Haemophilus parasuis SH0165 7278448 YP_002476135.1 CDS HAPS_1638 NC_011852.1 1616337 1617197 D AraC family transcriptional regulator 1616337..1617197 Haemophilus parasuis SH0165 7278449 YP_002476136.1 CDS pykF NC_011852.1 1617521 1617964 R COG:S;COG4922; pyruvate kinase complement(1617521..1617964) Haemophilus parasuis SH0165 7278451 YP_002476137.1 CDS HAPS_1641 NC_011852.1 1618099 1618989 D COG:K;COG0583; LysR family transcriptional regulator 1618099..1618989 Haemophilus parasuis SH0165 7277554 YP_002476138.1 CDS recB NC_011852.1 1620027 1623614 D COG:L;COG1074; exodeoxyribonuclease V subunit beta 1620027..1623614 Haemophilus parasuis SH0165 7277557 YP_002476139.1 CDS aspS NC_011852.1 1624601 1626373 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1624601..1626373) Haemophilus parasuis SH0165 7277559 YP_002476140.1 CDS grpE NC_011852.1 1626553 1627152 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1626553..1627152 Haemophilus parasuis SH0165 7277560 YP_002476141.1 CDS HAPS_1648 NC_011852.1 1627249 1627551 D hypothetical protein 1627249..1627551 Haemophilus parasuis SH0165 7277561 YP_002476142.1 CDS HAPS_1649 NC_011852.1 1627615 1628067 D COG:S;COG2707; hypothetical protein 1627615..1628067 Haemophilus parasuis SH0165 7277562 YP_002476143.1 CDS hrpA NC_011852.1 1628082 1632020 D involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA 1628082..1632020 Haemophilus parasuis SH0165 7277563 YP_002476144.1 CDS tyrS NC_011852.1 1632228 1633418 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1632228..1633418 Haemophilus parasuis SH0165 7277564 YP_002476145.1 CDS alr NC_011852.1 1633508 1634644 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(1633508..1634644) Haemophilus parasuis SH0165 7277565 YP_002476146.1 CDS hflC NC_011852.1 1634768 1635682 D COG:O;COG0330; SPFH domain-containing protein 1634768..1635682 Haemophilus parasuis SH0165 7277566 YP_002476147.1 CDS HAPS_1654 NC_011852.1 1635692 1636132 D COG:OU;COG1585; regulator of membrane protease activity 1635692..1636132 Haemophilus parasuis SH0165 7277567 YP_002476148.1 CDS uraA NC_011852.1 1636207 1637433 R COG:F;COG2233; uracil permease complement(1636207..1637433) Haemophilus parasuis SH0165 7277568 YP_002476149.1 CDS HAPS_1656 NC_011852.1 1637628 1638923 R COG:R;COG2252; xanthine/uracil/vitamin C permease complement(1637628..1638923) Haemophilus parasuis SH0165 7277569 YP_002476150.1 CDS HAPS_1659 NC_011852.1 1639662 1640411 R COG:R;COG4221; NADP-dependent dehydrogenase complement(1639662..1640411) Haemophilus parasuis SH0165 7277572 YP_002476151.1 CDS HAPS_1660 NC_011852.1 1640467 1641129 R COG:P;COG0288; carbonic anhydrase complement(1640467..1641129) Haemophilus parasuis SH0165 7277573 YP_002476152.1 CDS HAPS_1661 NC_011852.1 1641487 1642458 D COG:L;COG3547; ISNme5, family IS110 1641487..1642458 Haemophilus parasuis SH0165 7277574 YP_002476153.1 CDS lolD NC_011852.1 1642648 1643334 D COG:V;COG1136; lipoprotein-releasing system ATP-binding protein lolD 1642648..1643334 Haemophilus parasuis SH0165 7277575 YP_002476154.1 CDS lolE NC_011852.1 1643334 1644584 D part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE 1643334..1644584 Haemophilus parasuis SH0165 7277576 YP_002476155.1 CDS codA NC_011852.1 1644618 1645604 R COG:FR;COG0402; hypothetical protein complement(1644618..1645604) Haemophilus parasuis SH0165 7277577 YP_002476156.1 CDS HAPS_1665 NC_011852.1 1645846 1646619 R COG:H;COG1179; molybdopterin/thiamine biosynthesis dinucleotide-utilizing protein complement(1645846..1646619) Haemophilus parasuis SH0165 7277578 YP_002476157.1 CDS ndh NC_011852.1 1646665 1647948 R COG:C;COG1252; NADH dehydrogenase complement(1646665..1647948) Haemophilus parasuis SH0165 7277579 YP_002476158.1 CDS ubiE NC_011852.1 1648287 1648937 R COG:QR;COG0500; ubiquinone/menaquinone biosynthesis methyltransferase complement(1648287..1648937) Haemophilus parasuis SH0165 7277580 YP_002476159.1 CDS lpxM NC_011852.1 1649057 1650007 R Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase complement(1649057..1650007) Haemophilus parasuis SH0165 7277581 YP_002476160.1 CDS rnfE NC_011852.1 1650017 1650706 R in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE complement(1650017..1650706) Haemophilus parasuis SH0165 7277582 YP_002476161.1 CDS HAPS_1670 NC_011852.1 1650896 1651438 R COG:L;COG1943; hypothetical protein complement(1650896..1651438) Haemophilus parasuis SH0165 7277583 YP_002476162.1 CDS rnfG NC_011852.1 1651472 1652110 R part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG complement(1651472..1652110) Haemophilus parasuis SH0165 7277584 YP_002476163.1 CDS rnfD NC_011852.1 1652107 1653174 R RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD complement(1652107..1653174) Haemophilus parasuis SH0165 7277585 YP_002476164.1 CDS yadS NC_011852.1 1653205 1653837 R COG:S;COG2860; membrane protein, yadS protein complement(1653205..1653837) Haemophilus parasuis SH0165 7277586 YP_002476165.1 CDS rnfC NC_011852.1 1653916 1655916 R part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC complement(1653916..1655916) Haemophilus parasuis SH0165 7277587 YP_002476166.1 CDS rnfB NC_011852.1 1655906 1656514 R part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB complement(1655906..1656514) Haemophilus parasuis SH0165 7277588 YP_002476167.1 CDS rnfA NC_011852.1 1656514 1657095 R COG:C;COG4657; Na(+)-translocating NADH-quinone reductase subunit E complement(1656514..1657095) Haemophilus parasuis SH0165 7277589 YP_002476168.1 CDS HAPS_1677 NC_011852.1 1657131 1657283 D hypothetical protein 1657131..1657283 Haemophilus parasuis SH0165 7277590 YP_002476169.1 CDS pdxY NC_011852.1 1657751 1658578 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 1657751..1658578 Haemophilus parasuis SH0165 7277592 YP_002476170.1 CDS HAPS_1681 NC_011852.1 1659414 1660400 R COG:L;COG3547; ISCro4, family IS3 complement(1659414..1660400) Haemophilus parasuis SH0165 7277594 YP_002476171.1 CDS HAPS_1682 NC_011852.1 1660663 1660986 D COG:L;COG2963; IS222, family IS3 1660663..1660986 Haemophilus parasuis SH0165 7277595 YP_002476172.1 CDS proS NC_011852.1 1666316 1668031 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(1666316..1668031) Haemophilus parasuis SH0165 7277599 YP_002476173.1 CDS acpP NC_011852.1 1668384 1668614 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1668384..1668614 Haemophilus parasuis SH0165 7277600 YP_002476174.1 CDS rbsK NC_011852.1 1668761 1669684 D phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; aminoimidazole riboside kinase 1668761..1669684 Haemophilus parasuis SH0165 7277601 YP_002476175.1 CDS cutC NC_011852.1 1669846 1670577 R COG:P;COG3142; copper homeostasis protein complement(1669846..1670577) Haemophilus parasuis SH0165 7277602 YP_002476176.1 CDS galM NC_011852.1 1670578 1671567 R COG:G;COG2017; aldose 1-epimerase complement(1670578..1671567) Haemophilus parasuis SH0165 7277603 YP_002476177.1 CDS galK NC_011852.1 1671638 1672792 R catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase complement(1671638..1672792) Haemophilus parasuis SH0165 7277604 YP_002476178.1 CDS holC NC_011852.1 1673636 1674073 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(1673636..1674073) Haemophilus parasuis SH0165 7277607 YP_002476179.1 CDS HAPS_1695 NC_011852.1 1674179 1675966 R COG:I;COG1022; long chain fatty acid CoA ligase complement(1674179..1675966) Haemophilus parasuis SH0165 7277608 YP_002476180.1 CDS torD NC_011852.1 1680275 1680835 R COG:R;COG3381; putative anaerobic dehydrogenase TorD complement(1680275..1680835) Haemophilus parasuis SH0165 7277615 YP_002476181.1 CDS nfo NC_011852.1 1680895 1681740 D Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1680895..1681740 Haemophilus parasuis SH0165 7277616 YP_002476182.1 CDS rplK NC_011852.1 1682681 1683109 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1682681..1683109 Haemophilus parasuis SH0165 7277618 YP_002476183.1 CDS rplA NC_011852.1 1683114 1683803 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1683114..1683803 Haemophilus parasuis SH0165 7277619 YP_002476184.1 CDS HAPS_1708 NC_011852.1 1684900 1685316 D COG:S;COG2259; DoxX family protein membrane protein 1684900..1685316 Haemophilus parasuis SH0165 7277621 YP_002476185.1 CDS HAPS_1712 NC_011852.1 1686960 1687373 D hypothetical protein 1686960..1687373 Haemophilus parasuis SH0165 7277625 YP_002476186.1 CDS hsdM NC_011852.1 1687811 1689424 R COG:V;COG0286; type I restriction-modification system, M subunit complement(1687811..1689424) Haemophilus parasuis SH0165 7277626 YP_002476187.1 CDS HAPS_1717 NC_011852.1 1692019 1692786 R Lj965 prophage protein complement(1692019..1692786) Haemophilus parasuis SH0165 7277630 YP_002476188.1 CDS HAPS_1718 NC_011852.1 1692783 1693220 R putative Lj965 prophage protein complement(1692783..1693220) Haemophilus parasuis SH0165 7277631 YP_002476189.1 CDS hsdR NC_011852.1 1693241 1696201 R COG:V;COG0610; HsdR family type I site-specific deoxyribonuclease complement(1693241..1696201) Haemophilus parasuis SH0165 7277632 YP_002476190.1 CDS HAPS_1720 NC_011852.1 1696548 1696853 D hypothetical protein 1696548..1696853 Haemophilus parasuis SH0165 7277633 YP_002476191.1 CDS HAPS_1721 NC_011852.1 1697407 1697772 R COG:K;COG1733; HxlR family transcriptional regulator complement(1697407..1697772) Haemophilus parasuis SH0165 7277634 YP_002476192.1 CDS HAPS_1722 NC_011852.1 1697917 1698168 D hypothetical protein 1697917..1698168 Haemophilus parasuis SH0165 7277635 YP_002476193.1 CDS rbsB NC_011852.1 1699846 1700793 R COG:G;COG1879; D-ribose ABC transporter substrate-binding component RbsB complement(1699846..1700793) Haemophilus parasuis SH0165 7277638 YP_002476194.1 CDS rbsC NC_011852.1 1700814 1701812 R COG:G;COG1172; D-ribose ABC transporter permease protein RbsC complement(1700814..1701812) Haemophilus parasuis SH0165 7277639 YP_002476195.1 CDS rbsA NC_011852.1 1701824 1703359 R COG:G;COG1129; D-ribose ABC transporter ATP binding protein RbsA complement(1701824..1703359) Haemophilus parasuis SH0165 7277640 YP_002476196.1 CDS manA NC_011852.1 1703590 1704801 R COG:G;COG1482; mannose-6-phosphate isomerase complement(1703590..1704801) Haemophilus parasuis SH0165 7277641 YP_002476197.1 CDS HAPS_1729 NC_011852.1 1704798 1705256 R COG:S;COG4811; hypothetical protein complement(1704798..1705256) Haemophilus parasuis SH0165 7277642 YP_002476198.1 CDS manZ NC_011852.1 1705330 1706166 R hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID complement(1705330..1706166) Haemophilus parasuis SH0165 7277643 YP_002476199.1 CDS manY NC_011852.1 1706179 1706979 R COG:G;COG3715; PTS system mannose/fructose/sorbose family transporter subunit IIC complement(1706179..1706979) Haemophilus parasuis SH0165 7277644 YP_002476200.1 CDS manX NC_011852.1 1706990 1707970 R COG:G;COG3444; PTS system mannose-specific EIIAB component complement(1706990..1707970) Haemophilus parasuis SH0165 7277645 YP_002476201.1 CDS hemH NC_011852.1 1708294 1709259 R COG:H;COG0276; protoheme ferro-lyase complement(1708294..1709259) Haemophilus parasuis SH0165 7277646 YP_002476202.1 CDS recC NC_011852.1 1709476 1712733 R COG:L;COG1330; exodeoxyribonuclease V subunit gamma complement(1709476..1712733) Haemophilus parasuis SH0165 7277647 YP_002476203.1 CDS ubiF NC_011852.1 1712835 1714007 R COG:HC;COG0654; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(1712835..1714007) Haemophilus parasuis SH0165 7277648 YP_002476204.1 CDS HAPS_1736 NC_011852.1 1714010 1714132 R hypothetical protein complement(1714010..1714132) Haemophilus parasuis SH0165 7277649 YP_002476205.1 CDS hicA NC_011852.1 1714220 1714525 D COG:S;COG3657; addiction module killer protein 1714220..1714525 Haemophilus parasuis SH0165 7277650 YP_002476206.1 CDS HAPS_1738 NC_011852.1 1714532 1714837 D COG:K;COG3636; putative transcriptional regulator 1714532..1714837 Haemophilus parasuis SH0165 7277651 YP_002476207.1 CDS hicB NC_011852.1 1715044 1715403 D COG:S;COG4226; HicB-like protein 1715044..1715403 Haemophilus parasuis SH0165 7277652 YP_002476208.1 CDS comM NC_011852.1 1715495 1717027 D COG:O;COG0606; competence protein M 1715495..1717027 Haemophilus parasuis SH0165 7277653 YP_002476209.1 CDS holB NC_011852.1 1717024 1718013 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(1717024..1718013) Haemophilus parasuis SH0165 7277654 YP_002476210.1 CDS tdk NC_011852.1 1718384 1719010 R COG:F;COG0125; thymidylate kinase complement(1718384..1719010) Haemophilus parasuis SH0165 7277655 YP_002476211.1 CDS fbp NC_011852.1 1719010 1720044 R COG:R;COG1559; periplasmic solute-binding protein complement(1719010..1720044) Haemophilus parasuis SH0165 7277656 YP_002476212.1 CDS tpiA NC_011852.1 1720591 1721382 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(1720591..1721382) Haemophilus parasuis SH0165 7277660 YP_002476213.1 CDS surE NC_011852.1 1721810 1722574 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1721810..1722574 Haemophilus parasuis SH0165 7277662 YP_002476214.1 CDS apoB NC_011852.1 1722575 1723159 D COG:S;COG1238; membrane lipoprotein B 1722575..1723159 Haemophilus parasuis SH0165 7277663 YP_002476215.1 CDS HAPS_1751 NC_011852.1 1723169 1723678 D lipoprotein 1723169..1723678 Haemophilus parasuis SH0165 7277664 YP_002476216.1 CDS lppB NC_011852.1 1723806 1724981 D COG:M;COG0739; outer membrane antigenic lipoprotein B 1723806..1724981 Haemophilus parasuis SH0165 7277665 YP_002476217.1 CDS rraA NC_011852.1 1728952 1729452 R regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA complement(1728952..1729452) Haemophilus parasuis SH0165 7277667 YP_002476218.1 CDS pqiA NC_011852.1 1729516 1730766 R COG:S;COG2995; paraquat-inducible protein A, PqiA complement(1729516..1730766) Haemophilus parasuis SH0165 7277668 YP_002476219.1 CDS rnhB NC_011852.1 1730763 1731350 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(1730763..1731350) Haemophilus parasuis SH0165 7277669 YP_002476220.1 CDS HAPS_1757 NC_011852.1 1731354 1732244 R COG:R;COG0354; putative GCV family glycine cleavage complex aminomethyltransferase complement(1731354..1732244) Haemophilus parasuis SH0165 7277670 YP_002476221.1 CDS HAPS_1759 NC_011852.1 1732586 1732978 R COG:K;COG1846; MarR family transcriptional regulator complement(1732586..1732978) Haemophilus parasuis SH0165 7277672 YP_002476222.1 CDS bcgIA NC_011852.1 1733606 1735519 D restriction enzyme subunit alpha/N-6 DNA methylase 1733606..1735519 Haemophilus parasuis SH0165 7277674 YP_002476223.1 CDS bcgIB NC_011852.1 1735512 1736648 D restriction enzyme subunit beta/N-6 DNA methylase 1735512..1736648 Haemophilus parasuis SH0165 7277675 YP_002476224.1 CDS hemL NC_011852.1 1737241 1738245 D COG:R;COG3943; glutamate-1-semialdehyde 2,1-aminomutase 1737241..1738245 Haemophilus parasuis SH0165 7277677 YP_002476225.1 CDS hemL NC_011852.1 1738672 1739955 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(1738672..1739955) Haemophilus parasuis SH0165 7277678 YP_002476226.1 CDS wecA NC_011852.1 1740101 1741165 D COG:M;COG0472; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 1740101..1741165 Haemophilus parasuis SH0165 7277679 YP_002476227.1 CDS HAPS_1767 NC_011852.1 1741178 1741429 D hypothetical protein 1741178..1741429 Haemophilus parasuis SH0165 7277680 YP_002476228.1 CDS wecB NC_011852.1 1741484 1742584 D COG:M;COG0381; UDP-N-acetylglucosamine 2-epimerase 1741484..1742584 Haemophilus parasuis SH0165 7277681 YP_002476229.1 CDS wecC NC_011852.1 1742571 1743815 D COG:M;COG0677; UDP-N-acetyl-D-mannosamine dehydrogenase 1742571..1743815 Haemophilus parasuis SH0165 7277682 YP_002476230.1 CDS dipZ NC_011852.1 1743906 1745627 D two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 1743906..1745627 Haemophilus parasuis SH0165 7277683 YP_002476231.1 CDS HAPS_1771 NC_011852.1 1745603 1746445 D related to short-chain alcohol dehydrogenases; COG:IQR;COG1028; dehydrogenases with different specificities 1745603..1746445 Haemophilus parasuis SH0165 7277684 YP_002476232.1 CDS HAPS_1772 NC_011852.1 1746784 1747707 D COG:L;COG2826; ISApl1, family IS30 1746784..1747707 Haemophilus parasuis SH0165 7277685 YP_002476233.1 CDS trmE NC_011852.1 1747804 1749162 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(1747804..1749162) Haemophilus parasuis SH0165 7277686 YP_002476234.1 CDS HAPS_1774 NC_011852.1 1749394 1749579 D hypothetical protein 1749394..1749579 Haemophilus parasuis SH0165 7277687 YP_002476235.1 CDS HAPS_1776 NC_011852.1 1750920 1751396 R integral membrane protein complement(1750920..1751396) Haemophilus parasuis SH0165 7277689 YP_002476236.1 CDS aroQ NC_011852.1 1751492 1751896 R COG:E;COG0757; 3-dehydroquinate dehydratase complement(1751492..1751896) Haemophilus parasuis SH0165 7277690 YP_002476237.1 CDS ulaD NC_011852.1 1752230 1752910 R catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase complement(1752230..1752910) Haemophilus parasuis SH0165 7277691 YP_002476238.1 CDS ulaC NC_011852.1 1753142 1753612 R COG:GT;COG1762; ascorbate-specific phosphotransferase protein IIA component, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) complement(1753142..1753612) Haemophilus parasuis SH0165 7277692 YP_002476239.1 CDS ulaA NC_011852.1 1753664 1755460 R COG:S;COG3037; PTS system ascorbate-specific transporter subunits IICB complement(1753664..1755460) Haemophilus parasuis SH0165 7277693 YP_002476240.1 CDS sgbU NC_011852.1 1755789 1756649 D L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; putative L-xylulose 5-phosphate 3-epimerase 1755789..1756649 Haemophilus parasuis SH0165 7277694 YP_002476241.1 CDS sgbE NC_011852.1 1756643 1757335 D COG:G;COG0235; L-ribulose-5-phosphate 4-epimerase 1756643..1757335 Haemophilus parasuis SH0165 7277695 YP_002476242.1 CDS HAPS_1784 NC_011852.1 1758286 1758987 R hypothetical protein complement(1758286..1758987) Haemophilus parasuis SH0165 7277697 YP_002476243.1 CDS HAPS_1785 NC_011852.1 1759030 1759590 R COG:R;COG1611; decarboxylase complement(1759030..1759590) Haemophilus parasuis SH0165 7277698 YP_002476244.1 CDS mazG NC_011852.1 1759654 1759974 D COG:R;COG1694; nucleotide pyrophosphohydrolase 1759654..1759974 Haemophilus parasuis SH0165 7277699 YP_002476245.1 CDS gntP NC_011852.1 1760032 1761381 R COG:GE;COG2610; gluconate permease complement(1760032..1761381) Haemophilus parasuis SH0165 7277700 YP_002476246.1 CDS gntK NC_011852.1 1761579 1762094 D COG:G;COG3265; gluconate kinase 1761579..1762094 Haemophilus parasuis SH0165 7277701 YP_002476247.1 CDS gntR NC_011852.1 1762091 1763029 R COG:K;COG1609; HTH-type transcriptional regulator complement(1762091..1763029) Haemophilus parasuis SH0165 7277702 YP_002476248.1 CDS napC NC_011852.1 1763227 1763817 R COG:C;COG3005; nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit complement(1763227..1763817) Haemophilus parasuis SH0165 7277703 YP_002476249.1 CDS napB NC_011852.1 1763817 1764245 R COG:C;COG3043; diheme cytochrome c550/periplasmic nitrate reductase, small subunit, cytochrome C550, in complex with NapA complement(1763817..1764245) Haemophilus parasuis SH0165 7277704 YP_002476250.1 CDS napH NC_011852.1 1764242 1765111 R part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component complement(1764242..1765111) Haemophilus parasuis SH0165 7277705 YP_002476251.1 CDS napG NC_011852.1 1765111 1765800 R part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component complement(1765111..1765800) Haemophilus parasuis SH0165 7277706 YP_002476252.1 CDS napA NC_011852.1 1765962 1768445 R periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit complement(1765962..1768445) Haemophilus parasuis SH0165 7277707 YP_002476253.1 CDS napD NC_011852.1 1768478 1768762 R COG:P;COG3062; periplasmic nitrate reductase subunit NapD complement(1768478..1768762) Haemophilus parasuis SH0165 7277708 YP_002476254.1 CDS napF NC_011852.1 1768764 1769234 R COG:C;COG1145; ferredoxin-type protein NapF complement(1768764..1769234) Haemophilus parasuis SH0165 7277709 YP_002476255.1 CDS HAPS_1797 NC_011852.1 1769330 1769470 D hypothetical protein 1769330..1769470 Haemophilus parasuis SH0165 7277710 YP_002476256.1 CDS rpmJ NC_011852.1 1769488 1769613 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 complement(1769488..1769613) Haemophilus parasuis SH0165 7277711 YP_002476257.1 CDS rpmE2 NC_011852.1 1769632 1769898 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(1769632..1769898) Haemophilus parasuis SH0165 7277712 YP_002476258.1 CDS rpe NC_011852.1 1770112 1770786 D COG:G;COG0036; ribulose-phosphate 3-epimerase 1770112..1770786 Haemophilus parasuis SH0165 7277713 YP_002476259.1 CDS HAPS_1801 NC_011852.1 1770861 1772309 R COG:P;COG3119; arylsulfatase A complement(1770861..1772309) Haemophilus parasuis SH0165 7277714 YP_002476260.1 CDS yidK NC_011852.1 1772403 1774094 R uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; putative symporter YidK complement(1772403..1774094) Haemophilus parasuis SH0165 7277715 YP_002476261.1 CDS HAPS_1803 NC_011852.1 1774347 1775153 D COG:R;COG0730; permease 1774347..1775153 Haemophilus parasuis SH0165 7277716 YP_002476262.1 CDS oxyR NC_011852.1 1775277 1776167 D Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR 1775277..1776167 Haemophilus parasuis SH0165 7277717 YP_002476263.1 CDS fabR NC_011852.1 1776167 1776784 D negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 1776167..1776784 Haemophilus parasuis SH0165 7276678 YP_002476264.1 CDS HAPS_1806 NC_011852.1 1776786 1777301 D COG:OC;COG0526; thioredoxin-like protein 1776786..1777301 Haemophilus parasuis SH0165 7278652 YP_002476265.1 CDS dsbA NC_011852.1 1777343 1777912 R COG:OC;COG0526; Thiol:disulfide interchange protein dsbA complement(1777343..1777912) Haemophilus parasuis SH0165 7278653 YP_002476266.1 CDS HAPS_1808 NC_011852.1 1778020 1778289 R COG:S;COG3084; hypothetical protein complement(1778020..1778289) Haemophilus parasuis SH0165 7278654 YP_002476267.1 CDS mobAB NC_011852.1 1778374 1779486 D in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; MobB is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB 1778374..1779486 Haemophilus parasuis SH0165 7278655 YP_002476268.1 CDS iclR NC_011852.1 1780155 1780943 R COG:K;COG1414; transcriptional regulator IclR complement(1780155..1780943) Haemophilus parasuis SH0165 7278656 YP_002476269.1 CDS HAPS_1811 NC_011852.1 1781168 1781536 D malate/L-lactate dehydrogenase 1781168..1781536 Haemophilus parasuis SH0165 7278657 YP_002476270.1 CDS sgbK NC_011852.1 1782135 1783586 D COG:G;COG1070; L-xylulose kinase 1782135..1783586 Haemophilus parasuis SH0165 7278659 YP_002476271.1 CDS nusG NC_011852.1 1784248 1784781 R COG:K;COG0250; transcription antitermination protein NusG complement(1784248..1784781) Haemophilus parasuis SH0165 7278662 YP_002476272.1 CDS secE NC_011852.1 1784828 1785238 R forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(1784828..1785238) Haemophilus parasuis SH0165 7278663 YP_002476273.1 CDS tldD NC_011852.1 1785493 1786938 R COG:R;COG0312; protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD complement(1785493..1786938) Haemophilus parasuis SH0165 7278664 YP_002476274.1 CDS HAPS_1819 NC_011852.1 1786932 1787057 R hypothetical protein complement(1786932..1787057) Haemophilus parasuis SH0165 7278665 YP_002476275.1 CDS HAPS_1820 NC_011852.1 1787069 1787896 D COG:R;COG2819; alpha/beta superfamily hydrolase 1787069..1787896 Haemophilus parasuis SH0165 7278666 YP_002476276.1 CDS HAPS_1821 NC_011852.1 1788043 1788282 D COG:K;COG1396; XRE family transcriptional regulator 1788043..1788282 Haemophilus parasuis SH0165 7278667 YP_002476277.1 CDS hipA NC_011852.1 1788276 1789592 D COG:R;COG3550; HipA-like protein, regulator with hipB 1788276..1789592 Haemophilus parasuis SH0165 7278668 YP_002476278.1 CDS dsbA NC_011852.1 1790985 1791599 D COG:O;COG3531; DSBA oxidoreductase 1790985..1791599 Haemophilus parasuis SH0165 7278670 YP_002476279.1 CDS HAPS_1825 NC_011852.1 1791660 1792532 R COG:K;COG0583; LysR family transcriptional regulator complement(1791660..1792532) Haemophilus parasuis SH0165 7278671 YP_002476280.1 CDS HAPS_1826 NC_011852.1 1792535 1795450 R COG:V;COG3587; Type III restriction-modification system EcoPI enzyme subunit res complement(1792535..1795450) Haemophilus parasuis SH0165 7278672 YP_002476281.1 CDS HAPS_1827 NC_011852.1 1795454 1797376 R COG:L;COG2189; Type III restriction-modification system EcoPI enzyme mod (M.EcoPI) (EcoPI methyltransferase) complement(1795454..1797376) Haemophilus parasuis SH0165 7278673 YP_002476282.1 CDS HAPS_1828 NC_011852.1 1797564 1798757 R COG:R;COG1373; putative ATPase (AAA+ superfamily) complement(1797564..1798757) Haemophilus parasuis SH0165 7278674 YP_002476283.1 CDS HAPS_1829 NC_011852.1 1799185 1799397 D hypothetical protein 1799185..1799397 Haemophilus parasuis SH0165 7278675 YP_002476284.1 CDS HAPS_1830 NC_011852.1 1799484 1799882 R COG:K;COG0789; MerR family transcriptional regulator complement(1799484..1799882) Haemophilus parasuis SH0165 7278676 YP_002476285.1 CDS HAPS_1831 NC_011852.1 1799952 1800566 D COG:P;COG1230; Co/Zn/Cd efflux system component, CDF family cation diffusion facilitator 1799952..1800566 Haemophilus parasuis SH0165 7278677 YP_002476286.1 CDS HAPS_1832 NC_011852.1 1800657 1801043 R COG:K;COG0789; MerR family transcriptional regulator complement(1800657..1801043) Haemophilus parasuis SH0165 7278678 YP_002476287.1 CDS HAPS_1833 NC_011852.1 1801191 1801319 R hypothetical protein complement(1801191..1801319) Haemophilus parasuis SH0165 7278679 YP_002476288.1 CDS HAPS_1834 NC_011852.1 1801437 1802183 D COG:S;COG3544; hypothetical protein 1801437..1802183 Haemophilus parasuis SH0165 7278680 YP_002476289.1 CDS HAPS_1835 NC_011852.1 1802365 1803312 D COG:R;COG2070; 2-nitropropane dioxygenase 1802365..1803312 Haemophilus parasuis SH0165 7278681 YP_002476290.1 CDS msrA NC_011852.1 1803784 1804605 D putative methionine sulfoxide reductase A 1803784..1804605 Haemophilus parasuis SH0165 7278682 YP_002476291.1 CDS HAPS_1837 NC_011852.1 1804753 1805775 D COG:S;COG4804; putative cytoplasmic protein 1804753..1805775 Haemophilus parasuis SH0165 7278683 YP_002476292.1 CDS thiE NC_011852.1 1806067 1806729 R COG:H;COG0352; thiamine-phosphate pyrophosphorylase complement(1806067..1806729) Haemophilus parasuis SH0165 7278685 YP_002476293.1 CDS thiD NC_011852.1 1806746 1807546 R catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase complement(1806746..1807546) Haemophilus parasuis SH0165 7278686 YP_002476294.1 CDS thiM NC_011852.1 1807557 1808366 R COG:H;COG2145; hydroxyethylthiazole kinase complement(1807557..1808366) Haemophilus parasuis SH0165 7278687 YP_002476295.1 CDS tldD NC_011852.1 1810052 1811497 R COG:R;COG0312; protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD complement(1810052..1811497) Haemophilus parasuis SH0165 7278689 YP_002476296.1 CDS HAPS_1844 NC_011852.1 1811491 1811616 R hypothetical protein complement(1811491..1811616) Haemophilus parasuis SH0165 7278690 YP_002476297.1 CDS HAPS_1845 NC_011852.1 1811628 1812455 D COG:R;COG2819; putative hydrolase of the alpha/beta superfamily 1811628..1812455 Haemophilus parasuis SH0165 7278691 YP_002476298.1 CDS hipB NC_011852.1 1812602 1812841 D COG:K;COG1396; transcriptional regulator 1812602..1812841 Haemophilus parasuis SH0165 7278692 YP_002476299.1 CDS hipA NC_011852.1 1812835 1814151 D COG:R;COG3550; HipA protein, co-regulate with HipB 1812835..1814151 Haemophilus parasuis SH0165 7278693 YP_002476300.1 CDS HAPS_1850 NC_011852.1 1816029 1816388 D hypothetical protein 1816029..1816388 Haemophilus parasuis SH0165 7278696 YP_002476301.1 CDS pykF NC_011852.1 1817480 1817923 D COG:S;COG4922; pyruvate kinase 1817480..1817923 Haemophilus parasuis SH0165 7278699 YP_002476302.1 CDS HAPS_1855 NC_011852.1 1818358 1818945 R COG:L;COG0742; N6-adenine-specific methylase complement(1818358..1818945) Haemophilus parasuis SH0165 7278701 YP_002476303.1 CDS ftsY NC_011852.1 1819044 1820411 D COG:U;COG0552; cell division protein, signal recognition particle GTPase 1819044..1820411 Haemophilus parasuis SH0165 7278702 YP_002476304.1 CDS fstE NC_011852.1 1820501 1821064 D COG:D;COG2884; cell division ATP-binding protein 1820501..1821064 Haemophilus parasuis SH0165 7278703 YP_002476305.1 CDS HAPS_1861 NC_011852.1 1824454 1824573 R hypothetical protein complement(1824454..1824573) Haemophilus parasuis SH0165 7278707 YP_002476306.1 CDS gst NC_011852.1 1824766 1825380 D COG:O;COG0625; glutathione S-transferase 1824766..1825380 Haemophilus parasuis SH0165 7278708 YP_002476307.1 CDS HAPS_1863 NC_011852.1 1825415 1825957 R COG:R;COG3545; esterase of the alpha/beta hydrolase fold esterase complement(1825415..1825957) Haemophilus parasuis SH0165 7278709 YP_002476308.1 CDS glpR NC_011852.1 1826042 1826800 R COG:KG;COG1349; glycerol-3-phosphate regulon repressor complement(1826042..1826800) Haemophilus parasuis SH0165 7278710 YP_002476309.1 CDS HAPS_1865 NC_011852.1 1826979 1827887 D COG:I;COG2084; 3-hydroxyisobutyrate dehydrogenase 1826979..1827887 Haemophilus parasuis SH0165 7278711 YP_002476310.1 CDS HAPS_1866 NC_011852.1 1827889 1829130 D COG:S;COG3395; Hrp-dependent type III effector protein 1827889..1829130 Haemophilus parasuis SH0165 7278712 YP_002476311.1 CDS fucA NC_011852.1 1829127 1829759 D COG:G;COG0235; putative aldolase 1829127..1829759 Haemophilus parasuis SH0165 7278713 YP_002476312.1 CDS tsa NC_011852.1 1829762 1830544 D COG:G;COG3622; hydroxypyruvate isomerase 1829762..1830544 Haemophilus parasuis SH0165 7278714 YP_002476313.1 CDS wbpK NC_011852.1 1830569 1831516 D COG:MG;COG0451; NAD-dependent epimerase/dehydratase 1830569..1831516 Haemophilus parasuis SH0165 7278715 YP_002476314.1 CDS gntP NC_011852.1 1831528 1832994 D COG:GE;COG2610; gluconate permease 1831528..1832994 Haemophilus parasuis SH0165 7278716 YP_002476315.1 CDS HAPS_1871 NC_011852.1 1833054 1834400 D COG:R;COG4099; phospholipase/carboxylesterase 1833054..1834400 Haemophilus parasuis SH0165 7278717 YP_002476316.1 CDS HAPS_1873 NC_011852.1 1835416 1835538 R hypothetical protein complement(1835416..1835538) Haemophilus parasuis SH0165 7278719 YP_002476317.1 CDS dld NC_011852.1 1836753 1838447 R component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase complement(1836753..1838447) Haemophilus parasuis SH0165 7278721 YP_002476318.1 CDS murI NC_011852.1 1844458 1845261 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(1844458..1845261) Haemophilus parasuis SH0165 7278727 YP_002476319.1 CDS ubiC NC_011852.1 1845295 1845798 R COG:H;COG3161; 4-hydroxybenzoate synthetase complement(1845295..1845798) Haemophilus parasuis SH0165 7278728 YP_002476320.1 CDS neuA NC_011852.1 1845799 1846398 R COG:E;COG2755; N-acylneuraminate cytidylyltransferase/lysophospholipase L1-like protein complement(1845799..1846398) Haemophilus parasuis SH0165 7278729 YP_002476321.1 CDS trpS NC_011852.1 1846437 1847465 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(1846437..1847465) Haemophilus parasuis SH0165 7278730 YP_002476322.1 CDS ubiD NC_011852.1 1847559 1849028 R COG:H;COG0043; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1847559..1849028) Haemophilus parasuis SH0165 7278731 YP_002476323.1 CDS dnaJ NC_011852.1 1849188 1850324 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(1849188..1850324) Haemophilus parasuis SH0165 7278732 YP_002476324.1 CDS vapD NC_011852.1 1850377 1850802 R COG:S;COG3309; virulence-associated protein D complement(1850377..1850802) Haemophilus parasuis SH0165 7278733 YP_002476325.1 CDS HAPS_1888 NC_011852.1 1850826 1850996 R hypothetical protein complement(1850826..1850996) Haemophilus parasuis SH0165 7278734 YP_002476326.1 CDS dnaK NC_011852.1 1851021 1852922 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1851021..1852922) Haemophilus parasuis SH0165 7278735 YP_002476327.1 CDS chaA NC_011852.1 1853152 1854231 R COG:P;COG0387; calcium/proton antiporter complement(1853152..1854231) Haemophilus parasuis SH0165 7278736 YP_002476328.1 CDS carA NC_011852.1 1855821 1856945 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1855821..1856945 Haemophilus parasuis SH0165 7278738 YP_002476329.1 CDS carB NC_011852.1 1857092 1860292 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1857092..1860292 Haemophilus parasuis SH0165 7278739 YP_002476330.1 CDS nhaA NC_011852.1 1860356 1861549 R exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter complement(1860356..1861549) Haemophilus parasuis SH0165 7278740 YP_002476331.1 CDS rpmH NC_011852.1 1861837 1861971 D in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 1861837..1861971 Haemophilus parasuis SH0165 7278741 YP_002476332.1 CDS rnpA NC_011852.1 1861971 1862381 D protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 1861971..1862381 Haemophilus parasuis SH0165 7278742 YP_002476333.1 CDS HAPS_1897 NC_011852.1 1862399 1862626 D COG:S;COG0759; hypothetical protein 1862399..1862626 Haemophilus parasuis SH0165 7278743 YP_002476334.1 CDS sirA NC_011852.1 1862655 1863263 R COG:S;COG1739; cell developmental protein SirA complement(1862655..1863263) Haemophilus parasuis SH0165 7278744 YP_002476335.1 CDS HAPS_1899 NC_011852.1 1863489 1864448 D COG:R;COG2358; TRAP transporter solute receptor TAXI family protein 1863489..1864448 Haemophilus parasuis SH0165 7278745 YP_002476336.1 CDS dctM NC_011852.1 1864590 1867268 D COG:R;COG4666; TRAP dicarboxylate transporter subunit DctM 1864590..1867268 Haemophilus parasuis SH0165 7278746 YP_002476337.1 CDS uspA NC_011852.1 1867235 1867660 D COG:T;COG0589; universal stress protein A 1867235..1867660 Haemophilus parasuis SH0165 7278747 YP_002476338.1 CDS HAPS_1902 NC_011852.1 1867873 1868178 D COG:R;COG1669; DNA polymerase beta-like protein 1867873..1868178 Haemophilus parasuis SH0165 7278748 YP_002476339.1 CDS HAPS_1903 NC_011852.1 1868425 1869390 D COG:S;COG4804; hypothetical protein 1868425..1869390 Haemophilus parasuis SH0165 7278749 YP_002476340.1 CDS HAPS_1904 NC_011852.1 1869496 1869888 R COG:K;COG1396; transcriptional regulator complement(1869496..1869888) Haemophilus parasuis SH0165 7278750 YP_002476341.1 CDS gph NC_011852.1 1870008 1870634 D phosphoglycolate phosphatase 1870008..1870634 Haemophilus parasuis SH0165 7278751 YP_002476342.1 CDS comFC NC_011852.1 1870609 1871367 D putative amidophosphoribosyltransferase 1870609..1871367 Haemophilus parasuis SH0165 7278752 YP_002476343.1 CDS smf NC_011852.1 1871378 1872373 D DNA uptake Rossmann fold nucleotide-binding protein 1871378..1872373 Haemophilus parasuis SH0165 7278753 YP_002476344.1 CDS pilT NC_011852.1 1872464 1872883 R COG:R;COG1487; plasmid stability-like protein/nucleic acid-binding protein, contains PIN domain complement(1872464..1872883) Haemophilus parasuis SH0165 7278754 YP_002476345.1 CDS HAPS_1909 NC_011852.1 1872892 1873158 R prevent-host-death family protein/antitoxin of toxin-antitoxin stability system complement(1872892..1873158) Haemophilus parasuis SH0165 7278755 YP_002476346.1 CDS fmt NC_011852.1 1873340 1874290 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 1873340..1874290 Haemophilus parasuis SH0165 7278756 YP_002476347.1 CDS rsmB NC_011852.1 1874290 1875588 D COG:J;COG0144; ribosomal RNA small subunit methyltransferase B 1874290..1875588 Haemophilus parasuis SH0165 7278757 YP_002476348.1 CDS trkA NC_011852.1 1875604 1876980 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 1875604..1876980 Haemophilus parasuis SH0165 7278758 YP_002476349.1 CDS ald NC_011852.1 1877879 1878988 D COG:E;COG0686; alanine dehydrogenase 1877879..1878988 Haemophilus parasuis SH0165 7278759 YP_002476350.1 CDS HAPS_1914 NC_011852.1 1879146 1880507 D COG:R;COG0733; SNF family Na+-dependent transporter 1879146..1880507 Haemophilus parasuis SH0165 7278760 YP_002476351.1 CDS HAPS_1915 NC_011852.1 1880563 1880676 D hypothetical protein 1880563..1880676 Haemophilus parasuis SH0165 7278761 YP_002476352.1 CDS HAPS_1916 NC_011852.1 1880783 1881919 R ISRssp2, family IS1595 complement(1880783..1881919) Haemophilus parasuis SH0165 7278762 YP_002476353.1 CDS hgaI NC_011852.1 1882112 1883563 R type II restriction enzyme HgaI complement(1882112..1883563) Haemophilus parasuis SH0165 7278763 YP_002476354.1 CDS HAPS_1918 NC_011852.1 1883553 1884629 R COG:L;COG0270; moodification methylase HgaIA complement(1883553..1884629) Haemophilus parasuis SH0165 7278764 YP_002476355.1 CDS HAPS_1919 NC_011852.1 1884619 1885692 R COG:L;COG0270; moodification methylase HgaIA complement(1884619..1885692) Haemophilus parasuis SH0165 7278765 YP_002476356.1 CDS HAPS_1920 NC_011852.1 1885939 1886241 R transcriptional regulator complement(1885939..1886241) Haemophilus parasuis SH0165 7278766 YP_002476357.1 CDS HAPS_1921 NC_011852.1 1886720 1887397 D ISSst2, family IS1595 1886720..1887397 Haemophilus parasuis SH0165 7278767 YP_002476358.1 CDS HAPS_1922 NC_011852.1 1887397 1887840 D DNA repair ATPase 1887397..1887840 Haemophilus parasuis SH0165 7278768 YP_002476359.1 CDS HAPS_1923 NC_011852.1 1887824 1888369 R hypothetical protein complement(1887824..1888369) Haemophilus parasuis SH0165 7278769 YP_002476360.1 CDS trkG NC_011852.1 1888539 1890005 R COG:P;COG0168; trk-type K+ transport system, membrane component complement(1888539..1890005) Haemophilus parasuis SH0165 7278770 YP_002476361.1 CDS cof NC_011852.1 1890500 1891345 R COG:R;COG0561; putative haloacid dehalogenase-like hydrolase complement(1890500..1891345) Haemophilus parasuis SH0165 7278772 YP_002476362.1 CDS leuA NC_011852.1 1891980 1893419 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1891980..1893419 Haemophilus parasuis SH0165 7278773 YP_002476363.1 CDS pepT NC_011852.1 1893503 1894753 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 1893503..1894753 Haemophilus parasuis SH0165 7278774 YP_002476364.1 CDS rplT NC_011852.1 1897732 1898085 R COG:J;COG0292; 50S ribosomal protein L20 complement(1897732..1898085) Haemophilus parasuis SH0165 7278777 YP_002476365.1 CDS rpmI NC_011852.1 1898176 1898373 R COG:J;COG0291; 50S ribosomal protein L35 complement(1898176..1898373) Haemophilus parasuis SH0165 7278779 YP_002476366.1 CDS infC NC_011852.1 1898473 1898952 R COG:J;COG0290; translation initiation factor IF-3 complement(1898473..1898952) Haemophilus parasuis SH0165 7278780 YP_002476367.1 CDS gcp NC_011852.1 1899230 1900264 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1899230..1900264 Haemophilus parasuis SH0165 7278781 YP_002476368.1 CDS aroE NC_011852.1 1900553 1901368 R catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(1900553..1901368) Haemophilus parasuis SH0165 7278782 YP_002476369.1 CDS rplS NC_011852.1 1901502 1901861 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(1901502..1901861) Haemophilus parasuis SH0165 7278783 YP_002476370.1 CDS HAPS_1938 NC_011852.1 1901886 1903064 R multidrug-efflux transporter complement(1901886..1903064) Haemophilus parasuis SH0165 7278784 YP_002476371.1 CDS mccB NC_011852.1 1903057 1904097 R UBA/THIF-type NAD/FAD binding protein, bacteriocin biosynthesis protein complement(1903057..1904097) Haemophilus parasuis SH0165 7278785 YP_002476372.1 CDS rplS NC_011852.1 1904407 1904757 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(1904407..1904757) Haemophilus parasuis SH0165 7278786 YP_002476373.1 CDS trmD NC_011852.1 1904771 1905538 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(1904771..1905538) Haemophilus parasuis SH0165 7278787 YP_002476374.1 CDS rimM NC_011852.1 1905587 1906114 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(1905587..1906114) Haemophilus parasuis SH0165 7278788 YP_002476375.1 CDS rpsP NC_011852.1 1906142 1906390 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(1906142..1906390) Haemophilus parasuis SH0165 7278789 YP_002476376.1 CDS HAPS_1944 NC_011852.1 1906400 1906579 R hypothetical protein complement(1906400..1906579) Haemophilus parasuis SH0165 7278790 YP_002476377.1 CDS nhaC NC_011852.1 1906734 1908125 R COG:C;COG1757; Na+/H+ antiporter complement(1906734..1908125) Haemophilus parasuis SH0165 7278791 YP_002476378.1 CDS HAPS_1946 NC_011852.1 1908365 1908739 R hypothetical protein complement(1908365..1908739) Haemophilus parasuis SH0165 7278792 YP_002476379.1 CDS HAPS_1947 NC_011852.1 1908693 1908836 R hypothetical protein complement(1908693..1908836) Haemophilus parasuis SH0165 7278793 YP_002476380.1 CDS HAPS_1948 NC_011852.1 1908928 1909131 D hypothetical protein 1908928..1909131 Haemophilus parasuis SH0165 7278794 YP_002476381.1 CDS hsdS NC_011852.1 1910131 1911129 D type I site-specific deoxyribonuclease S subunit, restriction modification system 1910131..1911129 Haemophilus parasuis SH0165 7278796 YP_002476382.1 CDS tir NC_011852.1 1911148 1913706 D Toll-interleukin receptor 1911148..1913706 Haemophilus parasuis SH0165 7278797 YP_002476383.1 CDS HAPS_1953 NC_011852.1 1916967 1917680 D COG:R;COG1451; putative metal-dependent hydrolase 1916967..1917680 Haemophilus parasuis SH0165 7278799 YP_002476384.1 CDS ecoRIM NC_011852.1 1917971 1918942 D similar to modification methylase EcoRI (adenine-specificmethyltransferase EcoRI) (M.EcoRI); adenine-specific methyltransferase 1917971..1918942 Haemophilus parasuis SH0165 7278800 YP_002476385.1 CDS hnh NC_011852.1 1918974 1920086 D HNH endonuclease 1918974..1920086 Haemophilus parasuis SH0165 7278801 YP_002476386.1 CDS bcgIB NC_011852.1 1920208 1921278 R type IIS restriction enzyme protein complement(1920208..1921278) Haemophilus parasuis SH0165 7278802 YP_002476387.1 CDS asnA NC_011852.1 1922959 1923951 R catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA complement(1922959..1923951) Haemophilus parasuis SH0165 7278805 YP_002476388.1 CDS asnC NC_011852.1 1924128 1924619 D transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 1924128..1924619 Haemophilus parasuis SH0165 7278806 YP_002476389.1 CDS udp NC_011852.1 1924731 1925498 D catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 1924731..1925498 Haemophilus parasuis SH0165 7278807 YP_002476390.1 CDS HAPS_1962 NC_011852.1 1925672 1926001 D COG:S;COG3085; hypothetical protein 1925672..1926001 Haemophilus parasuis SH0165 7278808 YP_002476391.1 CDS trmA2 NC_011852.1 1926054 1927163 D catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 1926054..1927163 Haemophilus parasuis SH0165 7278809 YP_002476392.1 CDS rpsL NC_011852.1 1927778 1928152 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1927778..1928152 Haemophilus parasuis SH0165 7278812 YP_002476393.1 CDS rpsG NC_011852.1 1928282 1928752 D COG:J;COG0049; 30S ribosomal protein S7 1928282..1928752 Haemophilus parasuis SH0165 7278813 YP_002476394.1 CDS fusA NC_011852.1 1928850 1930952 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1928850..1930952 Haemophilus parasuis SH0165 7278814 YP_002476395.1 CDS tuf NC_011852.1 1931020 1932207 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1931020..1932207 Haemophilus parasuis SH0165 7278896 YP_002476396.1 CDS rlmB NC_011852.1 1933438 1934172 R Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase complement(1933438..1934172) Haemophilus parasuis SH0165 7277349 YP_002476397.1 CDS prfC NC_011852.1 1934310 1935899 R stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 complement(1934310..1935899) Haemophilus parasuis SH0165 7277350 YP_002476398.1 CDS apaH NC_011852.1 1936027 1936716 R COG:T;COG0639; diadenosine tetraphosphatase complement(1936027..1936716) Haemophilus parasuis SH0165 7277351 YP_002476399.1 CDS nadR NC_011852.1 1936713 1937984 R catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase complement(1936713..1937984) Haemophilus parasuis SH0165 7277352 YP_002476400.1 CDS fdx NC_011852.1 1938239 1938424 D COG:C;COG1145; 4Fe-4S ferredoxin 1938239..1938424 Haemophilus parasuis SH0165 7277353 YP_002476401.1 CDS hemG NC_011852.1 1938419 1938946 R COG:CH;COG4635; protoporphyrinogen oxidase complement(1938419..1938946) Haemophilus parasuis SH0165 7277354 YP_002476402.1 CDS aphA NC_011852.1 1939123 1939842 D Class B; non-specific; catalyzes the dephosphorylation of organic phosphomonoesters; also has phosphotransferase activity; acid phosphatase/phosphotransferase 1939123..1939842 Haemophilus parasuis SH0165 7277355 YP_002476403.1 CDS purL NC_011852.1 1940117 1944013 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 1940117..1944013 Haemophilus parasuis SH0165 7277356 YP_002476404.1 CDS HAPS_1979 NC_011852.1 1944076 1944465 D hypothetical protein 1944076..1944465 Haemophilus parasuis SH0165 7277357 YP_002476405.1 CDS HAPS_1980 NC_011852.1 1944922 1945569 D hypothetical protein 1944922..1945569 Haemophilus parasuis SH0165 7277358 YP_002476406.1 CDS lapB NC_011852.1 1945679 1946566 R COG:S;COG2990; arginine ABC transporter membrane protein complement(1945679..1946566) Haemophilus parasuis SH0165 7277359 YP_002476407.1 CDS valS NC_011852.1 1946636 1949335 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(1946636..1949335) Haemophilus parasuis SH0165 7277360 YP_002476408.1 CDS hindIIIM NC_011852.1 1949436 1950431 R COG:L;COG0863; Modification methylase HindIII complement(1949436..1950431) Haemophilus parasuis SH0165 7277361 YP_002476409.1 CDS HAPS_1985 NC_011852.1 1951659 1951829 R hypothetical protein complement(1951659..1951829) Haemophilus parasuis SH0165 7277363 YP_002476410.1 CDS fic NC_011852.1 1951816 1952574 R COG:S;COG3177; filamentation induced by cAMP protein fic complement(1951816..1952574) Haemophilus parasuis SH0165 7277364 YP_002476411.1 CDS HAPS_1990 NC_011852.1 1954212 1954343 R hypothetical protein complement(1954212..1954343) Haemophilus parasuis SH0165 7277368 YP_002476412.1 CDS trpA NC_011852.1 1954871 1955695 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(1954871..1955695) Haemophilus parasuis SH0165 7277370 YP_002476413.1 CDS trpB NC_011852.1 1955692 1956888 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1955692..1956888) Haemophilus parasuis SH0165 7277371 YP_002476414.1 CDS trpC NC_011852.1 1956908 1958377 R monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1956908..1958377) Haemophilus parasuis SH0165 7277372 YP_002476415.1 CDS trpD NC_011852.1 1958390 1959391 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(1958390..1959391) Haemophilus parasuis SH0165 7277373 YP_002476416.1 CDS trpG NC_011852.1 1959393 1959992 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(1959393..1959992) Haemophilus parasuis SH0165 7277374 YP_002476417.1 CDS trpE NC_011852.1 1960005 1961546 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(1960005..1961546) Haemophilus parasuis SH0165 7277375 YP_002476418.1 CDS HAPS_1998 NC_011852.1 1961857 1963374 R COG:M;COG1368; sulfatase/phosphoglycerol transferase complement(1961857..1963374) Haemophilus parasuis SH0165 7277376 YP_002476419.1 CDS rluB NC_011852.1 1964096 1965115 R COG:J;COG1187; ribosomal large subunit pseudouridine synthase B complement(1964096..1965115) Haemophilus parasuis SH0165 7277379 YP_002476420.1 CDS sua5 NC_011852.1 1965283 1965903 R COG:J;COG0009; putative translation factor complement(1965283..1965903) Haemophilus parasuis SH0165 7277380 YP_002476421.1 CDS sufE NC_011852.1 1967115 1967504 R COG:R;COG2166; SufE protein probably involved in Fe-S center assembly complement(1967115..1967504) Haemophilus parasuis SH0165 7277383 YP_002476422.1 CDS clpP NC_011852.1 1967605 1968186 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1967605..1968186 Haemophilus parasuis SH0165 7277384 YP_002476423.1 CDS clpX NC_011852.1 1968193 1969443 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1968193..1969443 Haemophilus parasuis SH0165 7277385 YP_002476424.1 CDS dapE NC_011852.1 1969517 1970650 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(1969517..1970650) Haemophilus parasuis SH0165 7277386 YP_002476425.1 CDS pilD NC_011852.1 1970734 1971402 R Tfp pilus assembly pathway, fimbrial leader peptidase PilD complement(1970734..1971402) Haemophilus parasuis SH0165 7277387 YP_002476426.1 CDS pilC NC_011852.1 1971399 1972595 R COG:NU;COG1459; Tfp pilus assembly pathway, component PilC complement(1971399..1972595) Haemophilus parasuis SH0165 7276677 YP_002476427.1 CDS pilB NC_011852.1 1972588 1973973 R COG:NU;COG2804; Tfp pilus assembly pathway, ATPase PilB complement(1972588..1973973) Haemophilus parasuis SH0165 7278126 YP_002476428.1 CDS HAPS_2012 NC_011852.1 1974326 1974691 R COG:S;COG2852; DNA methyltransferase complement(1974326..1974691) Haemophilus parasuis SH0165 7278127 YP_002476429.1 CDS pilA NC_011852.1 1974964 1975416 R COG:NU;COG4969; Tfp pilus assembly protein, major pilin PilA complement(1974964..1975416) Haemophilus parasuis SH0165 7278128 YP_002476430.1 CDS radA NC_011852.1 1975604 1976980 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1975604..1976980 Haemophilus parasuis SH0165 7278129 YP_002476431.1 CDS gmk NC_011852.1 1977033 1977659 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1977033..1977659) Haemophilus parasuis SH0165 7278130 YP_002476432.1 CDS HAPS_2016 NC_011852.1 1977728 1978699 R COG:L;COG3547; ISNme5, family IS110 complement(1977728..1978699) Haemophilus parasuis SH0165 7278131 YP_002476433.1 CDS HAPS_2017 NC_011852.1 1978828 1978953 D hypothetical protein 1978828..1978953 Haemophilus parasuis SH0165 7278132 YP_002476434.1 CDS rep NC_011852.1 1978950 1980971 D COG:L;COG0210; ATP-dependent DNA helicase 1978950..1980971 Haemophilus parasuis SH0165 7278133 YP_002476435.1 CDS HAPS_2019 NC_011852.1 1980983 1981819 R hypothetical protein complement(1980983..1981819) Haemophilus parasuis SH0165 7278134 YP_002476436.1 CDS yibK NC_011852.1 1992116 1992595 R COG:J;COG0219; putative tRNA/rRNA methyltransferase complement(1992116..1992595) Haemophilus parasuis SH0165 7278143 YP_002476437.1 CDS rlmL NC_011852.1 1992599 1994776 R catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase complement(1992599..1994776) Haemophilus parasuis SH0165 7278144 YP_002476438.1 CDS rsmC NC_011852.1 1994926 1995867 R 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase complement(1994926..1995867) Haemophilus parasuis SH0165 7278145 YP_002476439.1 CDS holD NC_011852.1 1995950 1996363 D with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi 1995950..1996363 Haemophilus parasuis SH0165 7278146 YP_002476440.1 CDS HAPS_2032 NC_011852.1 1996365 1996805 D COG:M;COG0739; metallopeptidase peptidase 1996365..1996805 Haemophilus parasuis SH0165 7278147 YP_002476441.1 CDS rimI NC_011852.1 1997047 1997484 D alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 1997047..1997484 Haemophilus parasuis SH0165 7278148 YP_002476442.1 CDS hipA NC_011852.1 1997596 1998939 D COG:R;COG3550; HipA domain-containing protein 1997596..1998939 Haemophilus parasuis SH0165 7278149 YP_002476443.1 CDS HAPS_2035 NC_011852.1 1998939 1999283 D COG:K;COG1396; XRE family transcriptional regulator 1998939..1999283 Haemophilus parasuis SH0165 7278150 YP_002476444.1 CDS srmB NC_011852.1 1999312 2000637 D facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 1999312..2000637 Haemophilus parasuis SH0165 7278151 YP_002476445.1 CDS lolB NC_011852.1 2000758 2001390 D Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 2000758..2001390 Haemophilus parasuis SH0165 7278152 YP_002476446.1 CDS ipk NC_011852.1 2001392 2002237 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2001392..2002237 Haemophilus parasuis SH0165 7278153 YP_002476447.1 CDS prsA NC_011852.1 2002265 2003215 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2002265..2003215 Haemophilus parasuis SH0165 7278154 YP_002476448.1 CDS pyrD NC_011852.1 2003458 2004465 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2003458..2004465 Haemophilus parasuis SH0165 7278155 YP_002476449.1 CDS HAPS_2041 NC_011852.1 2004746 2004892 R hypothetical protein complement(2004746..2004892) Haemophilus parasuis SH0165 7278156 YP_002476450.1 CDS HAPS_2042 NC_011852.1 2004994 2005185 R hypothetical protein complement(2004994..2005185) Haemophilus parasuis SH0165 7278157 YP_002476451.1 CDS crp NC_011852.1 2005440 2006114 R complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein complement(2005440..2006114) Haemophilus parasuis SH0165 7278158 YP_002476452.1 CDS HAPS_2044 NC_011852.1 2006181 2006405 R COG:S;COG3089; hypothetical protein complement(2006181..2006405) Haemophilus parasuis SH0165 7278159 YP_002476453.1 CDS slmA NC_011852.1 2006413 2007018 R FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein complement(2006413..2007018) Haemophilus parasuis SH0165 7278160 YP_002476454.1 CDS dut NC_011852.1 2007027 2007482 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(2007027..2007482) Haemophilus parasuis SH0165 7278161 YP_002476455.1 CDS HAPS_2047 NC_011852.1 2007508 2007834 R hypothetical protein complement(2007508..2007834) Haemophilus parasuis SH0165 7278162 YP_002476456.1 CDS dfp NC_011852.1 2007844 2008935 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(2007844..2008935) Haemophilus parasuis SH0165 7278163 YP_002476457.1 CDS radC NC_011852.1 2009339 2009932 D COG:L;COG2003; DNA repair protein RadC 2009339..2009932 Haemophilus parasuis SH0165 7278164 YP_002476458.1 CDS rpmB NC_011852.1 2010058 2010294 D required for 70S ribosome assembly; 50S ribosomal protein L28 2010058..2010294 Haemophilus parasuis SH0165 7278165 YP_002476459.1 CDS rpmG NC_011852.1 2010306 2010476 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2010306..2010476 Haemophilus parasuis SH0165 7278166 YP_002476460.1 CDS HAPS_2053 NC_011852.1 2011670 2012035 D COG:S;COG3111; OB-fold nucleic acid binding domain-containing protein 2011670..2012035 Haemophilus parasuis SH0165 7278168 YP_002476461.1 CDS cheY NC_011852.1 2012096 2012767 D COG:TK;COG0745; two component transcriptional regulator/response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 2012096..2012767 Haemophilus parasuis SH0165 7278169 YP_002476462.1 CDS qseC NC_011852.1 2012754 2014154 D COG:T;COG0642; sensor protein QseC/integral membrane sensor signal transduction histidine kinase 2012754..2014154 Haemophilus parasuis SH0165 7278170 YP_002476463.1 CDS HAPS_2056 NC_011852.1 2014217 2014333 D hypothetical protein 2014217..2014333 Haemophilus parasuis SH0165 7278171 YP_002476464.1 CDS groES NC_011852.1 2014546 2014833 D COG:O;COG0234; co-chaperonin GroES (HSP10) 2014546..2014833 Haemophilus parasuis SH0165 7278172 YP_002476465.1 CDS groEL NC_011852.1 2014944 2016587 D COG:O;COG0459; chaperonin GroEL (HSP60 family) 2014944..2016587 Haemophilus parasuis SH0165 7278173 YP_002476466.1 CDS HAPS_2059 NC_011852.1 2016754 2017806 D catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 2016754..2017806 Haemophilus parasuis SH0165 7278174 YP_002476467.1 CDS HAPS_2060 NC_011852.1 2017882 2018391 D COG:L;COG2963; ISHin1, family IS3 2017882..2018391 Haemophilus parasuis SH0165 7278175 YP_002476468.1 CDS HAPS_2061 NC_011852.1 2018388 2019209 D COG:L;COG2801; ISHin1, family IS3 2018388..2019209 Haemophilus parasuis SH0165 7278176 YP_002476469.1 CDS HAPS_2064 NC_011852.1 2023347 2023505 R hypothetical protein complement(2023347..2023505) Haemophilus parasuis SH0165 7278179 YP_002476470.1 CDS erpA NC_011852.1 2023826 2024167 R COG:S;COG0316; iron-sulfur cluster insertion protein ErpA complement(2023826..2024167) Haemophilus parasuis SH0165 7278180 YP_002476471.1 CDS obgE NC_011852.1 2024278 2025453 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(2024278..2025453) Haemophilus parasuis SH0165 7278181 YP_002476472.1 CDS HAPS_2067 NC_011852.1 2025478 2026410 R COG:GER;COG0697; drug/metabolite transporter (DMT) superfamily permease complement(2025478..2026410) Haemophilus parasuis SH0165 7278182 YP_002476473.1 CDS HAPS_2068 NC_011852.1 2026412 2027278 R COG:GER;COG0697; drug/metabolite transporter (DMT) superfamily permease complement(2026412..2027278) Haemophilus parasuis SH0165 7278183 YP_002476474.1 CDS rpmA NC_011852.1 2027419 2027676 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(2027419..2027676) Haemophilus parasuis SH0165 7278184 YP_002476475.1 CDS rplU NC_011852.1 2027697 2028008 R COG:J;COG0261; 50S ribosomal protein L21 complement(2027697..2028008) Haemophilus parasuis SH0165 7278185 YP_002476476.1 CDS nagA NC_011852.1 2028206 2029357 R COG:G;COG1820; N-acetylglucosamine-6-phosphate deacetylase complement(2028206..2029357) Haemophilus parasuis SH0165 7278186 YP_002476477.1 CDS nagB NC_011852.1 2029367 2030161 R catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase complement(2029367..2030161) Haemophilus parasuis SH0165 7278187 YP_002476478.1 CDS dapF NC_011852.1 2030561 2031385 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(2030561..2031385) Haemophilus parasuis SH0165 7278188 YP_002476479.1 CDS dcuB NC_011852.1 2031538 2032860 D functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 2031538..2032860 Haemophilus parasuis SH0165 7278189 YP_002476480.1 CDS panF NC_011852.1 2033122 2034552 R mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter complement(2033122..2034552) Haemophilus parasuis SH0165 7278190 YP_002476481.1 CDS HAPS_2076 NC_011852.1 2034542 2034781 R COG:S;COG3924; hypothetical protein complement(2034542..2034781) Haemophilus parasuis SH0165 7278191 YP_002476482.1 CDS metJ NC_011852.1 2034838 2035155 R when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ complement(2034838..2035155) Haemophilus parasuis SH0165 7278192 YP_002476483.1 CDS corA NC_011852.1 2035490 2036455 D responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 2035490..2036455 Haemophilus parasuis SH0165 7278193 YP_002476484.1 CDS mfd NC_011852.1 2036567 2040220 R COG:LK;COG1197; transcription-repair coupling factor complement(2036567..2040220) Haemophilus parasuis SH0165 7278194 YP_002476485.1 CDS mdtH NC_011852.1 2040284 2041348 D putative multidrug resistance protein mdtH 2040284..2041348 Haemophilus parasuis SH0165 7278195 YP_002476486.1 CDS thrC NC_011852.1 2041403 2042677 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2041403..2042677) Haemophilus parasuis SH0165 7278196 YP_002476487.1 CDS fklB NC_011852.1 2044443 2045072 D COG:O;COG0545; FKBP-type peptidyl-prolyl cis-trans isomerase 2044443..2045072 Haemophilus parasuis SH0165 7278198 YP_002476488.1 CDS tpx NC_011852.1 2045121 2045621 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(2045121..2045621) Haemophilus parasuis SH0165 7278199 YP_002476489.1 CDS HAPS_2086 NC_011852.1 2045618 2045794 R hypothetical protein complement(2045618..2045794) Haemophilus parasuis SH0165 7278200 YP_002476490.1 CDS plsC NC_011852.1 2045775 2046497 D COG:I;COG0204; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2045775..2046497 Haemophilus parasuis SH0165 7278202 YP_002476491.1 CDS sufI NC_011852.1 2046499 2047908 D COG:Q;COG2132; protein SufI /multicopper oxidase type 3 2046499..2047908 Haemophilus parasuis SH0165 7278201 YP_002476492.1 CDS accA NC_011852.1 2048029 2048982 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 2048029..2048982 Haemophilus parasuis SH0165 7278203 YP_002476493.1 CDS HAPS_2089 NC_011852.1 2049419 2049604 R COG:S;COG5566; bacteriophage transcriptional regulator complement(2049419..2049604) Haemophilus parasuis SH0165 7278204 YP_002476494.1 CDS ptsEII NC_011852.1 2050164 2051657 D COG:G;COG1263; PTS system transporter subunit IIBC 2050164..2051657 Haemophilus parasuis SH0165 7278207 YP_002476495.1 CDS HAPS_2093 NC_011852.1 2051956 2052942 R COG:L;COG3547; ISIMb1, family IS110 complement(2051956..2052942) Haemophilus parasuis SH0165 7277388 YP_002476496.1 CDS HAPS_2096 NC_011852.1 2055362 2056144 D COG:ET;COG0834; amino acid ABC transporter substrate-binding protein 2055362..2056144 Haemophilus parasuis SH0165 7278537 YP_002476497.1 CDS yckJ NC_011852.1 2056212 2056850 D COG:E;COG0765; amino acid ABC transporter permease 2056212..2056850 Haemophilus parasuis SH0165 7278538 YP_002476498.1 CDS yckI NC_011852.1 2056853 2057602 D COG:E;COG1126; amino acid ABC transporter ATPase 2056853..2057602 Haemophilus parasuis SH0165 7278539 YP_002476499.1 CDS HAPS_2100 NC_011852.1 2058101 2060143 D COG:S;COG1479; hypothetical protein 2058101..2060143 Haemophilus parasuis SH0165 7278541 YP_002476500.1 CDS gltD NC_011852.1 2060271 2061698 R COG:ER;COG0493; glutamate synthase (NADPH) subunit beta complement(2060271..2061698) Haemophilus parasuis SH0165 7278542 YP_002476501.1 CDS gltB NC_011852.1 2061915 2065901 R COG:E;COG0069; glutamate synthase (ferredoxin) subunit alpha complement(2061915..2065901) Haemophilus parasuis SH0165 7278543 YP_002476502.1 CDS HAPS_2103 NC_011852.1 2065914 2066369 D hypothetical protein 2065914..2066369 Haemophilus parasuis SH0165 7278544 YP_002476503.1 CDS HAPS_2104 NC_011852.1 2066507 2067493 R COG:L;COG3547; ISIMb1, family IS110 complement(2066507..2067493) Haemophilus parasuis SH0165 7278545 YP_002476504.1 CDS HAPS_2110 NC_011852.1 2074076 2074387 R COG:J;COG0251; putative translation initiation inhibitor, yjgF family complement(2074076..2074387) Haemophilus parasuis SH0165 7278551 YP_002476505.1 CDS ilvE NC_011852.1 2074456 2075475 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(2074456..2075475) Haemophilus parasuis SH0165 7278552 YP_002476506.1 CDS gcvA NC_011852.1 2075914 2076810 D Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 2075914..2076810 Haemophilus parasuis SH0165 7278553 YP_002476507.1 CDS HAPS_2113 NC_011852.1 2076832 2077506 D manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; nucleotidase 2076832..2077506 Haemophilus parasuis SH0165 7278554 YP_002476508.1 CDS cysB NC_011852.1 2077572 2078507 D LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 2077572..2078507 Haemophilus parasuis SH0165 7278555 YP_002476509.1 CDS HAPS_2115 NC_011852.1 2078611 2078952 D putative outer membrane protein 2078611..2078952 Haemophilus parasuis SH0165 7278556 YP_002476510.1 CDS icc NC_011852.1 2079490 2080179 D COG:R;COG1409; cyclic 3',5'-adenosine monophosphate phosphodiesterase 2079490..2080179 Haemophilus parasuis SH0165 7278557 YP_002476511.1 CDS ldhA NC_011852.1 2080274 2081263 R COG:CHR;COG1052; D-lactate dehydrogenase complement(2080274..2081263) Haemophilus parasuis SH0165 7278558 YP_002476512.1 CDS HAPS_2118 NC_011852.1 2081273 2082340 R hypothetical protein complement(2081273..2082340) Haemophilus parasuis SH0165 7278559 YP_002476513.1 CDS dcm NC_011852.1 2082337 2083299 R COG:L;COG0270; DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase complement(2082337..2083299) Haemophilus parasuis SH0165 7278560 YP_002476514.1 CDS ispG NC_011852.1 2083307 2084416 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2083307..2084416) Haemophilus parasuis SH0165 7278561 YP_002476515.1 CDS HAPS_2121 NC_011852.1 2084418 2085500 R COG:S;COG1426; hypothetical protein complement(2084418..2085500) Haemophilus parasuis SH0165 7278562 YP_002476516.1 CDS sppA NC_011852.1 2085636 2087501 R COG:OU;COG0616; protease IV, signal peptide peptidase complement(2085636..2087501) Haemophilus parasuis SH0165 7278563 YP_002476517.1 CDS msbA NC_011852.1 2087720 2089501 D COG:V;COG1132; lipid transporter ATP-binding/permease 2087720..2089501 Haemophilus parasuis SH0165 7278564 YP_002476518.1 CDS pnuC NC_011852.1 2089641 2090324 D COG:H;COG3201; nicotinamide mononucleotide ABC transporter membrane protein/ATP-binding protein 2089641..2090324 Haemophilus parasuis SH0165 7278565 YP_002476519.1 CDS yfgE NC_011852.1 2090387 2091127 D controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor 2090387..2091127 Haemophilus parasuis SH0165 7278566 YP_002476520.1 CDS ccmA NC_011852.1 2091128 2091754 D ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 2091128..2091754 Haemophilus parasuis SH0165 7278567 YP_002476521.1 CDS ccmB NC_011852.1 2091764 2092426 D COG:O;COG2386; cytochrome c-type biogenesis protein/heme exporter protein B 2091764..2092426 Haemophilus parasuis SH0165 7278568 YP_002476522.1 CDS ccmC NC_011852.1 2092473 2093213 D COG:O;COG0755; cytochrome c-type biogenesis protein/heme exporter protein C 2092473..2093213 Haemophilus parasuis SH0165 7278569 YP_002476523.1 CDS ccmD NC_011852.1 2093222 2093416 D COG:U;COG3114; cytochrome c-type biogenesis protein/heme exporter protein D 2093222..2093416 Haemophilus parasuis SH0165 7278570 YP_002476524.1 CDS HAPS_2130 NC_011852.1 2093581 2094969 D COG:P;COG0471; di- and tricarboxylate transporter 2093581..2094969 Haemophilus parasuis SH0165 7278571 YP_002476525.1 CDS pgk NC_011852.1 2095370 2096383 D COG:G;COG0126; phosphoglycerate kinase 2095370..2096383 Haemophilus parasuis SH0165 7278572 YP_002476526.1 CDS HAPS_2133 NC_011852.1 2096428 2096547 R hypothetical protein complement(2096428..2096547) Haemophilus parasuis SH0165 7278573 YP_002476527.1 CDS fba NC_011852.1 2096528 2097607 D catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 2096528..2097607 Haemophilus parasuis SH0165 7278575 YP_002476528.1 CDS sapF NC_011852.1 2097780 2098580 D COG:V;COG4167; peptide transport system ATP-binding protein SapF 2097780..2098580 Haemophilus parasuis SH0165 7278574 YP_002476529.1 CDS HAPS_2135 NC_011852.1 2098593 2099231 D COG:C;COG0778; putative NAD(P)H nitroreductase 2098593..2099231 Haemophilus parasuis SH0165 7278576 YP_002476530.1 CDS HAPS_2136 NC_011852.1 2099320 2099853 D COG:S;COG2862; hypothetical protein 2099320..2099853 Haemophilus parasuis SH0165 7278577 YP_002476531.1 CDS ordL NC_011852.1 2099938 2101236 R COG:E;COG0665; oxidoreductase OrdL complement(2099938..2101236) Haemophilus parasuis SH0165 7278578 YP_002476532.1 CDS greB NC_011852.1 2101770 2102249 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(2101770..2102249) Haemophilus parasuis SH0165 7278582 YP_002476533.1 CDS kpsF NC_011852.1 2102249 2103184 R COG:M;COG0794; arabinose-5-phosphate isomerase complement(2102249..2103184) Haemophilus parasuis SH0165 7278583 YP_002476534.1 CDS pilF NC_011852.1 2103246 2103827 R COG:NU;COG3063; fimbrial biogenesis and twitching motility protein PilF-like protein complement(2103246..2103827) Haemophilus parasuis SH0165 7278584 YP_002476535.1 CDS HAPS_2144 NC_011852.1 2103875 2104846 R COG:L;COG3547; ISNme5, family IS110 complement(2103875..2104846) Haemophilus parasuis SH0165 7278585 YP_002476536.1 CDS HAPS_2145 NC_011852.1 2105089 2106249 R 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N complement(2105089..2106249) Haemophilus parasuis SH0165 7278586 YP_002476537.1 CDS rsaL NC_011852.1 2106450 2106758 R COG:K;COG2944; DNA-binding protein, virulence gene repressor RsaL complement(2106450..2106758) Haemophilus parasuis SH0165 7278587 YP_002476538.1 CDS HAPS_2147 NC_011852.1 2106864 2107100 R COG:JD;COG2026; hypothetical protein complement(2106864..2107100) Haemophilus parasuis SH0165 7278588 YP_002476539.1 CDS gltX NC_011852.1 2107934 2109373 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2107934..2109373 Haemophilus parasuis SH0165 7278593 YP_002476540.1 CDS copA NC_011852.1 2109858 2111987 R COG:P;COG2217; copper-transporting P-type ATPase complement(2109858..2111987) Haemophilus parasuis SH0165 7278595 YP_002476541.1 CDS cybC NC_011852.1 2112007 2112381 R COG:C;COG3783; soluble cytochrome b562 complement(2112007..2112381) Haemophilus parasuis SH0165 7278597 YP_002476542.1 CDS fabB NC_011852.1 2112441 2113676 R FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(2112441..2113676) Haemophilus parasuis SH0165 7278598 YP_002476543.1 CDS HAPS_2157 NC_011852.1 2113834 2116980 R COG:V;COG3587; type III restriction enzyme, res subunit complement(2113834..2116980) Haemophilus parasuis SH0165 7278599 YP_002476544.1 CDS mod NC_011852.1 2116993 2118900 R COG:L;COG2189; type III restriction-modification system methyltransferase (adenine-specific)/adenine specific DNA methylase Mod complement(2116993..2118900) Haemophilus parasuis SH0165 7278600 YP_002476545.1 CDS HAPS_2159 NC_011852.1 2118937 2119242 R hypothetical protein complement(2118937..2119242) Haemophilus parasuis SH0165 7278601 YP_002476546.1 CDS purA NC_011852.1 2119686 2120984 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(2119686..2120984) Haemophilus parasuis SH0165 7278602 YP_002476547.1 CDS hflC NC_011852.1 2121267 2122154 R COG:O;COG0330; protein HflC/membrane protease subunit, stomatin/prohibitin-like protein complement(2121267..2122154) Haemophilus parasuis SH0165 7278603 YP_002476548.1 CDS hflK NC_011852.1 2122157 2123371 R COG:O;COG0330; protein HflK/membrane protease subunit, stomatin/prohibitin-like protein complement(2122157..2123371) Haemophilus parasuis SH0165 7278604 YP_002476549.1 CDS wecD NC_011852.1 2123617 2124288 D COG:KR;COG0454; TDP-fucosamine acetyltransferase 2123617..2124288 Haemophilus parasuis SH0165 7278605 YP_002476550.1 CDS wecE NC_011852.1 2124288 2125424 D catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 2124288..2125424 Haemophilus parasuis SH0165 7278606 YP_002476551.1 CDS HAPS_2167 NC_011852.1 2126276 2127049 R putative iron compound ABC transporter permease complement(2126276..2127049) Haemophilus parasuis SH0165 7278609 YP_002476552.1 CDS tolC NC_011852.1 2127236 2128624 D COG:MU;COG1538; RND efflux system outer membrane lipoprotein/RND superfamily resistance-nodulation-cell division antiporter 2127236..2128624 Haemophilus parasuis SH0165 7278610 YP_002476553.1 CDS rnt NC_011852.1 2128684 2129334 R Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T complement(2128684..2129334) Haemophilus parasuis SH0165 7278611 YP_002476554.1 CDS glo1 NC_011852.1 2129334 2129738 R COG:E;COG0346; lactoylglutathione lyase complement(2129334..2129738) Haemophilus parasuis SH0165 7278612 YP_002476555.1 CDS HAPS_2171 NC_011852.1 2129819 2130643 D DMT superfamily drug/metabolite transporter 2129819..2130643 Haemophilus parasuis SH0165 7278613 YP_002476556.1 CDS HAPS_2172 NC_011852.1 2130692 2133361 D hypothetical protein 2130692..2133361 Haemophilus parasuis SH0165 7278614 YP_002476557.1 CDS HAPS_2174 NC_011852.1 2134368 2134682 D COG:K;COG2944; XRE family transcriptional regulator 2134368..2134682 Haemophilus parasuis SH0165 7278208 YP_002476558.1 CDS HAPS_2175 NC_011852.1 2134880 2135062 D hypothetical protein 2134880..2135062 Haemophilus parasuis SH0165 7277718 YP_002476559.1 CDS sfcA NC_011852.1 2135142 2137409 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(2135142..2137409) Haemophilus parasuis SH0165 7277719 YP_002476560.1 CDS ydhD NC_011852.1 2137699 2138025 R COG:O;COG0278; monothiol glutaredoxin-like protein complement(2137699..2138025) Haemophilus parasuis SH0165 7277720 YP_002476561.1 CDS recD NC_011852.1 2138151 2140043 R COG:L;COG0507; ATP-dependent exonuclease V subunit alpha complement(2138151..2140043) Haemophilus parasuis SH0165 7277721 YP_002476562.1 CDS hxuC NC_011852.1 2140202 2142328 R COG:P;COG1629; heme/hemopexin utilization protein C/outer membrane receptor protein complement(2140202..2142328) Haemophilus parasuis SH0165 7277722 YP_002476563.1 CDS hxuB NC_011852.1 2142475 2144169 D COG:U;COG2831; heme/hemopexin-binding protein B, hemolysin activation/secretion protein 2142475..2144169 Haemophilus parasuis SH0165 7277723 YP_002476564.1 CDS hxuA NC_011852.1 2144185 2147106 D COG:U;COG3210; heme/hemopexin-binding protein A (Heme:hemopexin utilization protein A) 2144185..2147106 Haemophilus parasuis SH0165 7277724 YP_002476565.1 CDS pykA NC_011852.1 2147192 2148631 R COG:G;COG0469; pyruvate kinase complement(2147192..2148631) Haemophilus parasuis SH0165 7277725 YP_002476566.1 CDS sixA NC_011852.1 2148759 2149250 D COG:T;COG2062; phosphohistidine phosphatase 2148759..2149250 Haemophilus parasuis SH0165 7277726 YP_002476567.1 CDS uhpT NC_011852.1 2149398 2150762 D cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; sugar phosphate antiporter 2149398..2150762 Haemophilus parasuis SH0165 7277727 YP_002476568.1 CDS uhpB NC_011852.1 2151416 2152723 D COG:T;COG3851; sensory histidine kinase UhpB/signal transduction histidine kinase, glucose-6-phosphate specific 2151416..2152723 Haemophilus parasuis SH0165 7277729 YP_002476569.1 CDS pfkA NC_011852.1 2153323 2154288 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(2153323..2154288) Haemophilus parasuis SH0165 7277731 YP_002476570.1 CDS nifS NC_011852.1 2154410 2155606 R COG:E;COG0520; cysteine desulfurase complement(2154410..2155606) Haemophilus parasuis SH0165 7277732 YP_002476571.1 CDS HAPS_2190 NC_011852.1 2155603 2156292 R COG:L;COG1525; putative micrococcal nuclease (thermonuclease)-like protein complement(2155603..2156292) Haemophilus parasuis SH0165 7277733 YP_002476572.1 CDS metR NC_011852.1 2156481 2157407 D COG:K;COG0583; LysR family transcriptional regulator 2156481..2157407 Haemophilus parasuis SH0165 7277734 YP_002476573.1 CDS pepQ NC_011852.1 2157478 2158800 R catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase complement(2157478..2158800) Haemophilus parasuis SH0165 7277735 YP_002476574.1 CDS sirA NC_011852.1 2158836 2159084 D TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 2158836..2159084 Haemophilus parasuis SH0165 7277736 YP_002476575.1 CDS HAPS_2194 NC_011852.1 2159070 2160602 R methyltransferase type 11 complement(2159070..2160602) Haemophilus parasuis SH0165 7277737 YP_002476576.1 CDS HAPS_2195 NC_011852.1 2160683 2161105 R COG:S;COG3076; hypothetical protein complement(2160683..2161105) Haemophilus parasuis SH0165 7277738 YP_002476577.1 CDS engB NC_011852.1 2161110 2161739 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(2161110..2161739) Haemophilus parasuis SH0165 7277739 YP_002476578.1 CDS HAPS_2197 NC_011852.1 2161895 2162311 R COG:S;COG3152; hypothetical protein complement(2161895..2162311) Haemophilus parasuis SH0165 7277740 YP_002476579.1 CDS pepN NC_011852.1 2162311 2164920 R COG:E;COG0308; aminopeptidase N complement(2162311..2164920) Haemophilus parasuis SH0165 7277741 YP_002476580.1 CDS dapE NC_011852.1 2164988 2165671 R COG:R;COG0325; succinyl-diaminopimelate desuccinylase complement(2164988..2165671) Haemophilus parasuis SH0165 7277742 YP_002476581.1 CDS kdsC NC_011852.1 2165739 2166278 D COG:R;COG1778; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 2165739..2166278 Haemophilus parasuis SH0165 7277743 YP_002476582.1 CDS orn NC_011852.1 2166363 2166869 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 2166363..2166869 Haemophilus parasuis SH0165 7277744 YP_002476583.1 CDS HAPS_2202 NC_011852.1 2166875 2167363 D COG:R;COG0802; putative ATPase 2166875..2167363 Haemophilus parasuis SH0165 7277745 YP_002476584.1 CDS amiB NC_011852.1 2167373 2168485 D COG:M;COG0860; N-acetylmuramoyl-L-alanine amidase 2167373..2168485 Haemophilus parasuis SH0165 7277746 YP_002476585.1 CDS HAPS_2204 NC_011852.1 2168606 2169265 D sugar phosphate permease, required for N-linked glycosylation 2168606..2169265 Haemophilus parasuis SH0165 7277747 YP_002476586.1 CDS HAPS_2205 NC_011852.1 2169289 2169894 R COG:S;COG1434; hypothetical protein complement(2169289..2169894) Haemophilus parasuis SH0165 7277748 YP_002476587.1 CDS neuA NC_011852.1 2170291 2170845 D COG:M;COG1083; acylneuraminate cytidylyltransferase/CMP-N-acetylneuraminic acid synthetase 2170291..2170845 Haemophilus parasuis SH0165 7277749 YP_002476588.1 CDS lsgE NC_011852.1 2171540 2172424 D COG:M;COG0463; putative lipooligosaccharide galactosyltransferase involved in cell wall biogenesis 2171540..2172424 Haemophilus parasuis SH0165 7277751 YP_002476589.1 CDS lsgF NC_011852.1 2172424 2173224 D COG:M;COG0463; putative UDP-galactose--lipooligosaccharide galactosyltransferase 2172424..2173224 Haemophilus parasuis SH0165 7277752 YP_002476590.1 CDS ccmF NC_011852.1 2173353 2175293 R COG:O;COG1138; cytochrome c-type biogenesis protein CcmF complement(2173353..2175293) Haemophilus parasuis SH0165 7277753 YP_002476591.1 CDS ccmE NC_011852.1 2175290 2175823 R CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE complement(2175290..2175823) Haemophilus parasuis SH0165 7277754 YP_002476592.1 CDS pntB NC_011852.1 2176350 2177723 R catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase complement(2176350..2177723) Haemophilus parasuis SH0165 7277755 YP_002476593.1 CDS pntA NC_011852.1 2177735 2179267 R forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha complement(2177735..2179267) Haemophilus parasuis SH0165 7277756 YP_002476594.1 CDS HAPS_2214 NC_011852.1 2179319 2179438 D hypothetical protein 2179319..2179438 Haemophilus parasuis SH0165 7277757 YP_002476595.1 CDS mreB NC_011852.1 2179546 2180598 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2179546..2180598 Haemophilus parasuis SH0165 7277758 YP_002476596.1 CDS mreC NC_011852.1 2180792 2181739 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 2180792..2181739 Haemophilus parasuis SH0165 7277759 YP_002476597.1 CDS mreD NC_011852.1 2181739 2182227 D COG:M;COG2891; rod shape-determining protein MreD/Cell shape-determining protein 2181739..2182227 Haemophilus parasuis SH0165 7277760 YP_002476598.1 CDS rarA NC_011852.1 2182227 2183570 D COG:L;COG2256; recombination factor protein RarA 2182227..2183570 Haemophilus parasuis SH0165 7277761 YP_002476599.1 CDS HAPS_2219 NC_011852.1 2183573 2185033 R putative outer membrane protein complement(2183573..2185033) Haemophilus parasuis SH0165 7277762 YP_002476600.1 CDS tonB NC_011852.1 2185170 2185973 D periplasmic protein, links inner and outer membranes 2185170..2185973 Haemophilus parasuis SH0165 7277763 YP_002476601.1 CDS exbB NC_011852.1 2185991 2186659 D COG:U;COG0811; biopolymer transport ExbB protein 2185991..2186659 Haemophilus parasuis SH0165 7277764 YP_002476602.1 CDS exbD NC_011852.1 2186734 2187069 D COG:U;COG0848; biopolymer transport ExbD protein 2186734..2187069 Haemophilus parasuis SH0165 7277765 YP_002476603.1 CDS tbpB NC_011852.1 2187280 2188740 D transferrin-binding protein 2 2187280..2188740 Haemophilus parasuis SH0165 7277766 YP_002476604.1 CDS tbpA NC_011852.1 2188754 2191456 D COG:P;COG1629; transferrin-binding protein 1 2188754..2191456 Haemophilus parasuis SH0165 7277767 YP_002476605.1 CDS HAPS_2225 NC_011852.1 2191877 2192203 R COG:J;COG1544; sigma 54 modulation protein complement(2191877..2192203) Haemophilus parasuis SH0165 7277768 YP_002476606.1 CDS HAPS_2226 NC_011852.1 2192377 2192688 D hypothetical protein 2192377..2192688 Haemophilus parasuis SH0165 7277769 YP_002476607.1 CDS lpxL NC_011852.1 2192688 2193623 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2192688..2193623 Haemophilus parasuis SH0165 7277770 YP_002476608.1 CDS orfM NC_011852.1 2193799 2194338 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 2193799..2194338 Haemophilus parasuis SH0165 7277771 YP_002476609.1 CDS HAPS_2229 NC_011852.1 2194346 2194531 D COG:S;COG0393; hypothetical protein 2194346..2194531 Haemophilus parasuis SH0165 7277772 YP_002476610.1 CDS HAPS_2230 NC_011852.1 2194531 2194986 D COG:S;COG2983; hypothetical protein 2194531..2194986 Haemophilus parasuis SH0165 7277773 YP_002476611.1 CDS uvrB NC_011852.1 2195031 2197046 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(2195031..2197046) Haemophilus parasuis SH0165 7277774 YP_002476612.1 CDS glnD NC_011852.1 2197225 2199801 D COG:O;COG2844; PII uridylyl-transferase 2197225..2199801 Haemophilus parasuis SH0165 7277775 YP_002476613.1 CDS sapC NC_011852.1 2200002 2200775 D COG:V;COG4171; peptide transport system permease 2200002..2200775 Haemophilus parasuis SH0165 7277776 YP_002476614.1 CDS sapD NC_011852.1 2200788 2201819 D COG:V;COG4170; peptide transport system ATP-binding protein 2200788..2201819 Haemophilus parasuis SH0165 7277777 YP_002476615.1 CDS eno NC_011852.1 2202047 2203357 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2202047..2203357 Haemophilus parasuis SH0165 7277778 YP_002476616.1 CDS HAPS_2236 NC_011852.1 2203727 2204218 D COG:S;COG1666; nucleotide-binding protein 2203727..2204218 Haemophilus parasuis SH0165 7277779 YP_002476617.1 CDS parE NC_011852.1 2204336 2206237 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2204336..2206237 Haemophilus parasuis SH0165 7277780 YP_002476618.1 CDS hktE NC_011852.1 2206368 2207816 D COG:P;COG0753; catalase 2206368..2207816 Haemophilus parasuis SH0165 7277781 YP_002476619.1 CDS HAPS_2239 NC_011852.1 2207911 2208996 D COG:R;COG1408; phosphohydrolase 2207911..2208996 Haemophilus parasuis SH0165 7277782 YP_002476620.1 CDS HAPS_2240 NC_011852.1 2209069 2209515 R COG:S;COG3120; hypothetical protein complement(2209069..2209515) Haemophilus parasuis SH0165 7277783 YP_002476621.1 CDS lonH NC_011852.1 2209592 2211226 D COG:O;COG1067; putative S16 family lon protease, ATP-dependent protease 2209592..2211226 Haemophilus parasuis SH0165 7277784 YP_002476622.1 CDS fabA NC_011852.1 2211347 2211877 D catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 2211347..2211877 Haemophilus parasuis SH0165 7277785 YP_002476623.1 CDS pulG NC_011852.1 2211966 2212475 D Type II secretory pathway, pseudopilin PulG 2211966..2212475 Haemophilus parasuis SH0165 7277786 YP_002476624.1 CDS HAPS_2244 NC_011852.1 2212441 2213136 D hypothetical protein 2212441..2213136 Haemophilus parasuis SH0165 7277787 YP_002476625.1 CDS HAPS_2245 NC_011852.1 2213133 2213792 D hypothetical protein 2213133..2213792 Haemophilus parasuis SH0165 7277788 YP_002476626.1 CDS HAPS_2246 NC_011852.1 2213785 2214081 D hypothetical protein 2213785..2214081 Haemophilus parasuis SH0165 7277789 YP_002476627.1 CDS norM NC_011852.1 2216465 2217856 R COG:V;COG0534; Drug:Na+ antiporter (norfloxacin, ethidium, kanamycin, ciprofloxin, streptomycin efflux pump) complement(2216465..2217856) Haemophilus parasuis SH0165 7277791 YP_002476628.1 CDS rluA NC_011852.1 2217869 2218579 R COG:J;COG0564; pseudouridylate synthase, 23S RNA-specific complement(2217869..2218579) Haemophilus parasuis SH0165 7277792 YP_002476629.1 CDS phnD NC_011852.1 2218699 2219574 D COG:P;COG3221; phosphate/phosphonate ABC transport system periplasmic phosphonate-binding protein 2218699..2219574 Haemophilus parasuis SH0165 7277793 YP_002476630.1 CDS phnC NC_011852.1 2219840 2220592 D COG:P;COG3638; phosphate/phosphonate ABC transporter ATPase 2219840..2220592 Haemophilus parasuis SH0165 7277794 YP_002476631.1 CDS phnE NC_011852.1 2220582 2221367 D COG:P;COG3639; phosphate/phosphonate ABC transport system permease protein 2220582..2221367 Haemophilus parasuis SH0165 7277795 YP_002476632.1 CDS phnE NC_011852.1 2221364 2222212 D COG:P;COG3639; phosphate/phosphonate ABC transport system inner membrane subunit 2221364..2222212 Haemophilus parasuis SH0165 7277796 YP_002476633.1 CDS HAPS_2254 NC_011852.1 2222274 2222966 D COG:S;COG2979; hypothetical protein 2222274..2222966 Haemophilus parasuis SH0165 7277797 YP_002476634.1 CDS nudH NC_011852.1 2223516 2224118 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 2223516..2224118 Haemophilus parasuis SH0165 7277798 YP_002476635.1 CDS HAPS_2256 NC_011852.1 2224115 2224912 D COG:R;COG0730; permease 2224115..2224912 Haemophilus parasuis SH0165 7277552 YP_002476636.1 CDS lgt NC_011852.1 2224922 2225725 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2224922..2225725 Haemophilus parasuis SH0165 7277223 YP_002476637.1 CDS ybfE NC_011852.1 2225922 2226215 D LexA regulated protein 2225922..2226215 Haemophilus parasuis SH0165 7277224 YP_002476638.1 CDS fldA NC_011852.1 2226225 2226749 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 2226225..2226749 Haemophilus parasuis SH0165 7277225 YP_002476639.1 CDS fur NC_011852.1 2226769 2227215 D COG:P;COG0735; ferric uptake regulation protein 2226769..2227215 Haemophilus parasuis SH0165 7277226 YP_002476640.1 CDS pqiB NC_011852.1 2227312 2229978 D COG:R;COG3008; paraquat-inducible protein B 2227312..2229978 Haemophilus parasuis SH0165 7277227 YP_002476641.1 CDS HAPS_2262 NC_011852.1 2230025 2230186 D hypothetical protein 2230025..2230186 Haemophilus parasuis SH0165 7277228 YP_002476642.1 CDS HAPS_2264 NC_011852.1 2230669 2231322 D COG:L;COG3676; IS1016C2 transposase, family IS1595 2230669..2231322 Haemophilus parasuis SH0165 7277230 YP_002476643.1 CDS proQ NC_011852.1 2231543 2232079 D affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector 2231543..2232079 Haemophilus parasuis SH0165 7277231 YP_002476644.1 CDS prc NC_011852.1 2232099 2234105 D Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2232099..2234105 Haemophilus parasuis SH0165 7277232 YP_002476645.1 CDS HAPS_2267 NC_011852.1 2234191 2235741 D COG:S;COG2989; hypothetical protein 2234191..2235741 Haemophilus parasuis SH0165 7277233 YP_002476646.1 CDS HAPS_2268 NC_011852.1 2235886 2236443 D COG:S;COG3108; hypothetical protein 2235886..2236443 Haemophilus parasuis SH0165 7277234 YP_002476647.1 CDS HAPS_2269 NC_011852.1 2236457 2237086 D COG:R;COG0491; glyoxalase II family protein 2236457..2237086 Haemophilus parasuis SH0165 7277235 YP_002476648.1 CDS vacJ NC_011852.1 2237091 2237837 D COG:M;COG2853; VacJ lipoprotein 2237091..2237837 Haemophilus parasuis SH0165 7277236 YP_002476649.1 CDS impA NC_011852.1 2237946 2238380 D COG:KT;COG1974; SOS-response transcriptional repressor 2237946..2238380 Haemophilus parasuis SH0165 7277237 YP_002476650.1 CDS metB NC_011852.1 2238939 2240045 R catalyzes the formation of cysteine from cystathionine; in B. subtilis also has O-acetylhomoserine thiolyase activity; cystathionine gamma-synthase complement(2238939..2240045) Haemophilus parasuis SH0165 7277239 YP_002476651.1 CDS dapB NC_011852.1 2240093 2240905 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(2240093..2240905) Haemophilus parasuis SH0165 7277240 YP_002476652.1 CDS metF NC_011852.1 2241040 2241921 R COG:E;COG0685; 5,10-methylenetetrahydrofolate reductase complement(2241040..2241921) Haemophilus parasuis SH0165 7277241 YP_002476653.1 CDS icd NC_011852.1 2242233 2243480 D COG:C;COG0538; isocitrate dehydrogenase (NADP(+)) 2242233..2243480 Haemophilus parasuis SH0165 7277242 YP_002476654.1 CDS acnB NC_011852.1 2243632 2246235 D catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2243632..2246235 Haemophilus parasuis SH0165 7277243 YP_002476655.1 CDS gltA NC_011852.1 2246271 2247551 D COG:C;COG0372; type II citrate synthase 2246271..2247551 Haemophilus parasuis SH0165 7277244 YP_002476656.1 CDS adk NC_011852.1 2247630 2248217 R COG:F;COG0563; adenylate kinase complement(2247630..2248217) Haemophilus parasuis SH0165 7277245 YP_002476657.1 CDS HAPS_2280 NC_011852.1 2248384 2249742 R COG:R;COG0733; putative Na+-dependent transporters of the SNF family complement(2248384..2249742) Haemophilus parasuis SH0165 7277246 YP_002476658.1 CDS dam NC_011852.1 2249771 2250589 R COG:L;COG0338; DNA adenine methylase Dam complement(2249771..2250589) Haemophilus parasuis SH0165 7277247 YP_002476659.1 CDS aroB NC_011852.1 2250599 2251576 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(2250599..2251576) Haemophilus parasuis SH0165 7277248 YP_002476660.1 CDS aroK NC_011852.1 2251702 2252223 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(2251702..2252223) Haemophilus parasuis SH0165 7277249 YP_002476661.1 CDS mrcA NC_011852.1 2252453 2255008 R COG:M;COG5009; membrane carboxypeptidase/penicillin-binding protein 1A complement(2252453..2255008) Haemophilus parasuis SH0165 7277250 YP_002476662.1 CDS comA NC_011852.1 2255162 2255839 D competence protein A 2255162..2255839 Haemophilus parasuis SH0165 7277251 YP_002476663.1 CDS HAPS_2286 NC_011852.1 2255815 2256336 D hypothetical protein 2255815..2256336 Haemophilus parasuis SH0165 7277252 YP_002476664.1 CDS HAPS_2287 NC_011852.1 2256333 2256863 D chromosome segregation ATPase 2256333..2256863 Haemophilus parasuis SH0165 7277253 YP_002476665.1 CDS HAPS_2288 NC_011852.1 2256863 2257249 D hypothetical protein 2256863..2257249 Haemophilus parasuis SH0165 7277254 YP_002476666.1 CDS comE NC_011852.1 2257259 2258521 D COG:U;COG4796; competence protein E/type II secretory pathway, component HofQ 2257259..2258521 Haemophilus parasuis SH0165 7277255 YP_002476667.1 CDS nusB NC_011852.1 2258600 2259013 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 2258600..2259013 Haemophilus parasuis SH0165 7277256 YP_002476668.1 CDS thiL NC_011852.1 2259022 2259990 D COG:H;COG0611; thiamin-monophosphate kinase 2259022..2259990 Haemophilus parasuis SH0165 7277257 YP_002476669.1 CDS pgpA NC_011852.1 2260107 2260463 D COG:I;COG1267; phosphatidylglycerophosphatase A 2260107..2260463 Haemophilus parasuis SH0165 7277258 YP_002476670.1 CDS rhtB NC_011852.1 2260465 2261094 D COG:E;COG1280; threonine efflux protein, RhtB family homoserine/threonine resistance transporter 2260465..2261094 Haemophilus parasuis SH0165 7277259 YP_002476671.1 CDS trxA NC_011852.1 2261391 2261705 D COG:OC;COG0526; thioredoxin 2261391..2261705 Haemophilus parasuis SH0165 7277260 YP_002476672.1 CDS HAPS_2296 NC_011852.1 2263089 2263508 R COG:Q;COG2050; hypothetical protein complement(2263089..2263508) Haemophilus parasuis SH0165 7277262 YP_002476673.1 CDS HAPS_2297 NC_011852.1 2263841 2266933 R COG:C;COG0277; FAD/FMN-containing dehydrogenase complement(2263841..2266933) Haemophilus parasuis SH0165 7277263 YP_002476674.1 CDS ompP5 NC_011852.1 2267336 2268451 D COG:M;COG2885; outer membrane protein P5 , heat-modifiable outer membrane protein 2267336..2268451 Haemophilus parasuis SH0165 7277264 YP_002476675.1 CDS msrB NC_011852.1 2268533 2268928 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(2268533..2268928) Haemophilus parasuis SH0165 7277265 HAPS_0199 tRNA HAPS_0199 NC_011852.1 216783 216859 D tRNA-Met 216783..216859 Haemophilus parasuis SH0165 7278041 HAPS_0426 tRNA HAPS_0426 NC_011852.1 460901 460986 R tRNA-Leu complement(460901..460986) Haemophilus parasuis SH0165 7276985 HAPS_0503 tRNA HAPS_0503 NC_011852.1 548057 548130 R tRNA-Cys complement(548057..548130) Haemophilus parasuis SH0165 7278508 HAPS_0504 tRNA HAPS_0504 NC_011852.1 548145 548220 R tRNA-Gly complement(548145..548220) Haemophilus parasuis SH0165 7278509 HAPS_0635 tRNA HAPS_0635 NC_011852.1 646345 646421 D tRNA-Arg 646345..646421 Haemophilus parasuis SH0165 7276786 HAPS_0642 tRNA HAPS_0642 NC_011852.1 650962 651038 R tRNA-Val complement(650962..651038) Haemophilus parasuis SH0165 7276793 HAPS_0784 tRNA HAPS_0784 NC_011852.1 790295 790380 R tRNA-Leu complement(790295..790380) Haemophilus parasuis SH0165 7278299 HAPS_0832 tRNA HAPS_0832 NC_011852.1 832189 832265 D tRNA-Asp 832189..832265 Haemophilus parasuis SH0165 7278347 HAPS_0912 tRNA HAPS_0912 NC_011852.1 897394 897464 D tRNA-Ser 897394..897464 Haemophilus parasuis SH0165 7277063 HAPS_0928 tRNA HAPS_0928 NC_011852.1 912958 913047 R tRNA-Ser complement(912958..913047) Haemophilus parasuis SH0165 7277801 HAPS_0988 tRNA HAPS_0988 NC_011852.1 974606 974681 D tRNA-Glu 974606..974681 Haemophilus parasuis SH0165 7277861 HAPS_1145 tRNA HAPS_1145 NC_011852.1 1136714 1136790 D tRNA-Pro 1136714..1136790 Haemophilus parasuis SH0165 7278869 HAPS_1146 tRNA HAPS_1146 NC_011852.1 1136830 1136906 D tRNA-Arg 1136830..1136906 Haemophilus parasuis SH0165 7278870 HAPS_1177 tRNA HAPS_1177 NC_011852.1 1163123 1163197 R tRNA-Gln complement(1163123..1163197) Haemophilus parasuis SH0165 7278902 HAPS_1178 tRNA HAPS_1178 NC_011852.1 1163244 1163318 R tRNA-Gln complement(1163244..1163318) Haemophilus parasuis SH0165 7278903 HAPS_1179 tRNA HAPS_1179 NC_011852.1 1163343 1163427 R tRNA-Leu complement(1163343..1163427) Haemophilus parasuis SH0165 7278904 HAPS_1180 tRNA HAPS_1180 NC_011852.1 1163431 1163507 R tRNA-Met complement(1163431..1163507) Haemophilus parasuis SH0165 7278905 HAPS_1228 tRNA HAPS_1228 NC_011852.1 1211170 1211245 R tRNA-Thr complement(1211170..1211245) Haemophilus parasuis SH0165 7278953 HAPS_1229 tRNA HAPS_1229 NC_011852.1 1211249 1211323 R tRNA-Gly complement(1211249..1211323) Haemophilus parasuis SH0165 7278954 HAPS_1230 tRNA HAPS_1230 NC_011852.1 1211366 1211450 R tRNA-Tyr complement(1211366..1211450) Haemophilus parasuis SH0165 7278955 HAPS_1231 tRNA HAPS_1231 NC_011852.1 1211481 1211556 R tRNA-Thr complement(1211481..1211556) Haemophilus parasuis SH0165 7278956 HAPS_1244 tRNA HAPS_1244 NC_011852.1 1221993 1222068 D tRNA-Gly 1221993..1222068 Haemophilus parasuis SH0165 7278969 HAPS_1245 tRNA HAPS_1245 NC_011852.1 1222076 1222162 D tRNA-Leu 1222076..1222162 Haemophilus parasuis SH0165 7278970 HAPS_1312 tRNA HAPS_1312 NC_011852.1 1286666 1286741 D tRNA-Phe 1286666..1286741 Haemophilus parasuis SH0165 7278105 HAPS_1313 tRNA HAPS_1313 NC_011852.1 1286760 1286835 D tRNA-Asn 1286760..1286835 Haemophilus parasuis SH0165 7278106 HAPS_1332 tRNA HAPS_1332 NC_011852.1 1311947 1312023 D tRNA-Arg 1311947..1312023 Haemophilus parasuis SH0165 7278125 HAPS_1333 tRNA HAPS_1333 NC_011852.1 1312051 1312126 D tRNA-His 1312051..1312126 Haemophilus parasuis SH0165 7277471 HAPS_1334 tRNA HAPS_1334 NC_011852.1 1312153 1312229 D tRNA-Pro 1312153..1312229 Haemophilus parasuis SH0165 7277472 HAPS_1336 tRNA HAPS_1336 NC_011852.1 1314094 1314169 D tRNA-Glu 1314094..1314169 Haemophilus parasuis SH0165 7277474 HAPS_1398 tRNA HAPS_1398 NC_011852.1 1380897 1380973 D tRNA-Ile 1380897..1380973 Haemophilus parasuis SH0165 7277536 HAPS_1399 tRNA HAPS_1399 NC_011852.1 1381043 1381118 D tRNA-Ala 1381043..1381118 Haemophilus parasuis SH0165 7277537 HAPS_1403 tRNA HAPS_1403 NC_011852.1 1384945 1385021 D tRNA-Asp 1384945..1385021 Haemophilus parasuis SH0165 7277541 HAPS_1404 tRNA HAPS_1404 NC_011852.1 1385075 1385150 D tRNA-Trp 1385075..1385150 Haemophilus parasuis SH0165 7277542 HAPS_1459 tRNA HAPS_1459 NC_011852.1 1435057 1435132 D tRNA-Gly 1435057..1435132 Haemophilus parasuis SH0165 7277204 HAPS_1460 tRNA HAPS_1460 NC_011852.1 1435145 1435231 D tRNA-Leu 1435145..1435231 Haemophilus parasuis SH0165 7277205 HAPS_1461 tRNA HAPS_1461 NC_011852.1 1435250 1435325 D tRNA-Gly 1435250..1435325 Haemophilus parasuis SH0165 7277206 HAPS_1507 tRNA HAPS_1507 NC_011852.1 1484773 1484848 D tRNA-Thr 1484773..1484848 Haemophilus parasuis SH0165 7277911 HAPS_1588 tRNA HAPS_1588 NC_011852.1 1565545 1565635 R tRNA-Sec complement(1565545..1565635) Haemophilus parasuis SH0165 7278399 HAPS_1744 tRNA HAPS_1744 NC_011852.1 1720152 1720227 R tRNA-Lys complement(1720152..1720227) Haemophilus parasuis SH0165 7277657 HAPS_1745 tRNA HAPS_1745 NC_011852.1 1720250 1720325 R tRNA-Lys complement(1720250..1720325) Haemophilus parasuis SH0165 7277658 HAPS_1746 tRNA HAPS_1746 NC_011852.1 1720349 1720424 R tRNA-Lys complement(1720349..1720424) Haemophilus parasuis SH0165 7277659 HAPS_1879 tRNA HAPS_1879 NC_011852.1 1842362 1842437 R tRNA-Glu complement(1842362..1842437) Haemophilus parasuis SH0165 7278725 HAPS_1964 tRNA HAPS_1964 NC_011852.1 1927239 1927328 D tRNA-Ser 1927239..1927328 Haemophilus parasuis SH0165 7278810 HAPS_1965 tRNA HAPS_1965 NC_011852.1 1927405 1927494 D tRNA-Ser 1927405..1927494 Haemophilus parasuis SH0165 7278811 HAPS_2023 tRNA HAPS_2023 NC_011852.1 1987606 1987682 D tRNA-Ile 1987606..1987682 Haemophilus parasuis SH0165 7278138 HAPS_2024 tRNA HAPS_2024 NC_011852.1 1987752 1987827 D tRNA-Ala 1987752..1987827 Haemophilus parasuis SH0165 7278139 HAPS_2095 tRNA HAPS_2095 NC_011852.1 2054773 2054849 R tRNA-Met complement(2054773..2054849) Haemophilus parasuis SH0165 7278536 HAPS_2106 tRNA HAPS_2106 NC_011852.1 2069774 2069849 D tRNA-Glu 2069774..2069849 Haemophilus parasuis SH0165 7278547 HAPS_2138 tRNA HAPS_2138 NC_011852.1 2101285 2101361 R tRNA-Arg complement(2101285..2101361) Haemophilus parasuis SH0165 7278579 HAPS_2139 tRNA HAPS_2139 NC_011852.1 2101430 2101506 R tRNA-Arg complement(2101430..2101506) Haemophilus parasuis SH0165 7278580 HAPS_2140 tRNA HAPS_2140 NC_011852.1 2101520 2101614 R tRNA-Ser complement(2101520..2101614) Haemophilus parasuis SH0165 7278581 HAPS_2148 tRNA HAPS_2148 NC_011852.1 2107305 2107380 R tRNA-Val complement(2107305..2107380) Haemophilus parasuis SH0165 7278589 HAPS_2149 tRNA HAPS_2149 NC_011852.1 2107423 2107498 R tRNA-Val complement(2107423..2107498) Haemophilus parasuis SH0165 7278590 HAPS_2150 tRNA HAPS_2150 NC_011852.1 2107556 2107631 R tRNA-Val complement(2107556..2107631) Haemophilus parasuis SH0165 7278591 HAPS_2151 tRNA HAPS_2151 NC_011852.1 2107678 2107753 R tRNA-Val complement(2107678..2107753) Haemophilus parasuis SH0165 7278592 HAPS_2153 tRNA HAPS_2153 NC_011852.1 2109456 2109531 D tRNA-Ala 2109456..2109531 Haemophilus parasuis SH0165 7278594 HAPS_0987 rRNA HAPS_0987 NC_011852.1 973143 974517 D 16S ribosomal RNA 973143..974517 Haemophilus parasuis SH0165 7277860 HAPS_0989 rRNA HAPS_0989 NC_011852.1 975071 977959 D 23S ribosomal RNA 975071..977959 Haemophilus parasuis SH0165 7277862 HAPS_0992 rRNA HAPS_0992 NC_011852.1 979367 979482 D 5S ribosomal RNA 979367..979482 Haemophilus parasuis SH0165 7277865 HAPS_1335 rRNA HAPS_1335 NC_011852.1 1312631 1314005 D 16S ribosomal RNA 1312631..1314005 Haemophilus parasuis SH0165 7277473 HAPS_1337 rRNA HAPS_1337 NC_011852.1 1314559 1317447 D 23S ribosomal RNA 1314559..1317447 Haemophilus parasuis SH0165 7277475 HAPS_1338 rRNA HAPS_1338 NC_011852.1 1317742 1317858 D 5S ribosomal RNA 1317742..1317858 Haemophilus parasuis SH0165 7277476 HAPS_1397 rRNA HAPS_1397 NC_011852.1 1379499 1380873 D 16S ribosomal RNA 1379499..1380873 Haemophilus parasuis SH0165 7277535 HAPS_1400 rRNA HAPS_1400 NC_011852.1 1381578 1384466 D 23S ribosomal RNA 1381578..1384466 Haemophilus parasuis SH0165 7277538 HAPS_1401 rRNA HAPS_1401 NC_011852.1 1384641 1384757 D 5S ribosomal RNA 1384641..1384757 Haemophilus parasuis SH0165 7277539 HAPS_1402 rRNA HAPS_1402 NC_011852.1 1384776 1384924 D 5S ribosomal RNA 1384776..1384924 Haemophilus parasuis SH0165 7277540 HAPS_1876 rRNA HAPS_1876 NC_011852.1 1838668 1838816 R 5S ribosomal RNA complement(1838668..1838816) Haemophilus parasuis SH0165 7278722 HAPS_1877 rRNA HAPS_1877 NC_011852.1 1838835 1838951 R 5S ribosomal RNA complement(1838835..1838951) Haemophilus parasuis SH0165 7278723 HAPS_1878 rRNA HAPS_1878 NC_011852.1 1839086 1841972 R 23S ribosomal RNA complement(1839086..1841972) Haemophilus parasuis SH0165 7278724 HAPS_1880 rRNA HAPS_1880 NC_011852.1 1842526 1843900 R 16S ribosomal RNA complement(1842526..1843900) Haemophilus parasuis SH0165 7278726 HAPS_2022 rRNA HAPS_2022 NC_011852.1 1986208 1987582 D 16S ribosomal RNA 1986208..1987582 Haemophilus parasuis SH0165 7278137 HAPS_2025 rRNA HAPS_2025 NC_011852.1 1988287 1991175 D 23S ribosomal RNA 1988287..1991175 Haemophilus parasuis SH0165 7278140 HAPS_2026 rRNA HAPS_2026 NC_011852.1 1991350 1991466 D 5S ribosomal RNA 1991350..1991466 Haemophilus parasuis SH0165 7278141 HAPS_2105 rRNA HAPS_2105 NC_011852.1 2068311 2069685 D 16S ribosomal RNA 2068311..2069685 Haemophilus parasuis SH0165 7278546 HAPS_2107 rRNA HAPS_2107 NC_011852.1 2070239 2073127 D 23S ribosomal RNA 2070239..2073127 Haemophilus parasuis SH0165 7278548 HAPS_2108 rRNA HAPS_2108 NC_011852.1 2073302 2073418 D 5S ribosomal RNA 2073302..2073418 Haemophilus parasuis SH0165 7278549