-- dump date 20120504_145634 -- class Genbank::CDS -- table cds_note -- id note YP_003993855.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: hor:Hore_00010 chromosomal replication initiator protein DnaA; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_003993856.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: hor:Hore_00020 DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain YP_003993857.1 KEGG: glo:Glov_0173 S4 domain protein YaaA; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003993858.1 KEGG: hor:Hore_00040 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_003993859.1 KEGG: hor:Hore_00050 hypothetical protein YP_003993860.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: hor:Hore_00060 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein YP_003993861.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: hor:Hore_00070 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003993862.1 KEGG: rpc:RPC_1181 hypothetical protein YP_003993863.1 KEGG: pmo:Pmob_0284 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like YP_003993864.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: hut:Huta_0683 FAD dependent oxidoreductase YP_003993865.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: hut:Huta_0682 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003993866.1 PFAM: protein of unknown function DUF1667; KEGG: hut:Huta_0681 protein of unknown function DUF1667 YP_003993867.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: srm:SRM_01934 intracellular protease I YP_003993868.1 TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: tte:TTE1997 dihydroxyacetone kinase; PFAM: Dak kinase YP_003993869.1 KEGG: sti:Sthe_3122 dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase YP_003993870.1 KEGG: hmo:HM1_0838 dihydroxyacetone kinase, phosphotransfer subunit, TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component YP_003993871.1 KEGG: trq:TRQ2_0642 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003993872.1 KEGG: tmt:Tmath_2160 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_003993873.1 KEGG: amt:Amet_0827 PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_003993874.1 KEGG: amt:Amet_0828 PTS system, fructose subfamily, IIC subunit; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system EIIC YP_003993875.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: hor:Hore_21140 peptidil-prolyl cis-trans isomerase YP_003993876.1 PFAM: Protein of unknown function DUF2088; KEGG: amt:Amet_0538 hypothetical protein YP_003993877.1 TIGRFAM: seryl-tRNA synthetase; KEGG: hor:Hore_21060 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_003993878.1 KEGG: clj:CLJU_c11630 2-keto-3-deoxy-6-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_003993879.1 PFAM: PfkB domain protein; KEGG: tjr:TherJR_2254 PfkB domain protein YP_003993880.1 PFAM: PfkB domain protein; KEGG: tpd:Teth39_1972 ribokinase-like domain-containing protein YP_003993881.1 TIGRFAM: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; KEGG: amt:Amet_4520 ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; PFAM: ATP-cone domain protein YP_003993882.1 KEGG: cbt:CLH_1874 two component system histidine kinase YP_003993883.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: cbe:Cbei_4594 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_003993884.1 KEGG: ddi:DDB_G0276005 hypothetical protein YP_003993885.1 PFAM: integrase family protein; KEGG: drm:Dred_0493 phage integrase family protein YP_003993886.1 KEGG: fra:Francci3_1200 excisionase/Xis, DNA-binding YP_003993887.1 KEGG: tva:TVAG_030630 viral A-type inclusion protein YP_003993888.1 KEGG: hor:Hore_22180 ParB-like partition protein; TIGRFAM: parB-like partition protein; SMART: ParB domain protein nuclease YP_003993889.1 PFAM: regulatory protein MarR; KEGG: taf:THA_749 transcriptional regulator YP_003993890.1 PFAM: integrase family protein; KEGG: cbo:CBOP005 site-specific recombinase YP_003993891.1 KEGG: sru:SRU_0598 multidrug ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_003993892.1 KEGG: cbe:Cbei_4338 cytidyltransferase-like protein; TIGRFAM: phosphoenolpyruvate phosphomutase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003993893.1 KEGG: cbe:Cbei_4337 thiamine pyrophosphate binding domain-containing protein; TIGRFAM: phosphonopyruvate decarboxylase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein YP_003993894.1 KEGG: pdi:BDI_1465 hemolysin erythrocyte lysis protein 2 YP_003993895.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bfr:BF2576 alcohol dehydrogenase YP_003993896.1 KEGG: tye:THEYE_A0837 ISCc3, transposase OrfA; manually curated; PFAM: transposase IS3/IS911 family protein YP_003993897.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: fjo:Fjoh_2238 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase YP_003993898.1 PFAM: glycosyl transferase group 1; KEGG: bmq:BMQ_1122 glycosyl transferase, group 1 YP_003993899.1 KEGG: nmg:Nmag_0923 hypothetical protein YP_003993900.1 PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase YP_003993901.1 PFAM: Integrase catalytic region; KEGG: aoe:Clos_0736 integrase catalytic region YP_003993902.1 PFAM: Integrase catalytic region; KEGG: tit:Thit_2281 integrase catalytic region YP_003993903.1 PFAM: transposase IS3/IS911 family protein; KEGG: hor:Hore_13730 transposase IS3/IS911 family protein YP_003993904.1 PFAM: Integrase catalytic region; KEGG: hor:Hore_00290 integrase catalytic region YP_003993905.1 KEGG: cpf:CPF_0915 polysaccharide polymerase protein YP_003993906.1 KEGG: bha:BH3663 lipopolysaccharide biosynthesis; manually curated; PFAM: glycosyl transferase group 1 YP_003993907.1 KEGG: mvo:Mvol_1635 metalloendopeptidase, glycoprotease family YP_003993908.1 PFAM: glycosyl transferase group 1; KEGG: rmr:Rmar_0824 glycosyl transferase group 1 YP_003993909.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: gym:GYMC10_2033 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003993910.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: dal:Dalk_1699 NAD-dependent epimerase/dehydratase YP_003993911.1 PFAM: glycosyl transferase group 1; KEGG: bwe:BcerKBAB4_5067 glycosyl transferase group 1 YP_003993912.1 PFAM: sugar transferase; KEGG: nis:NIS_1249 undecaprenyl-phosphate galactose phosphotransferase YP_003993913.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: hor:Hore_16970 DegT/DnrJ/EryC1/StrS aminotransferase YP_003993914.1 PFAM: integrase family protein; KEGG: sru:SRU_p0011 phage integrase family site specific recombinase YP_003993915.1 KEGG: pfh:PFHG_05239 conserved hypothetical protein YP_003993916.1 KEGG: dae:Dtox_3664 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003993917.1 KEGG: sdl:Sdel_1978 DNA primase YP_003993918.1 PFAM: DNA primase catalytic core domain; KEGG: hoh:Hoch_0630 DNA primase catalytic core domain protein YP_003993919.1 KEGG: brm:Bmur_2137 DNA primase YP_003993920.1 KEGG: edi:EDI_331040 hypothetical protein YP_003993921.1 PFAM: protein of unknown function DUF1232; KEGG: gfo:GFO_3402 hypothetical protein YP_003993922.1 KEGG: cgr:CAGL0H07821g hypothetical protein YP_003993923.1 KEGG: lpp:lpp0993 type IV pilus (Tfp) assembly protein PilQ YP_003993924.1 KEGG: cth:Cthe_2464 hypothetical protein YP_003993925.1 KEGG: aca:ACP_1222 hypothetical protein YP_003993926.1 KEGG: cjd:JJD26997_0851 prophage LambdaCh01, recombination protein Bet; TIGRFAM: phage recombination protein Bet; PFAM: DNA single-strand annealing protein RecT-like YP_003993927.1 KEGG: ppp:PHYPADRAFT_89684 hypothetical protein YP_003993928.1 PFAM: DNA repair protein RadC; KEGG: bcz:pE33L466_0244 DNA repair protein YP_003993929.1 KEGG: pyo:PY03769 chloroquine resistance marker protein YP_003993930.1 KEGG: nth:Nther_1988 hypothetical protein YP_003993931.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_003993932.1 PFAM: Radical SAM domain protein; SEC-C motif domain protein; KEGG: mac:MA2647 arylsulfatase regulator YP_003993933.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dsy:DSY1993 hypothetical protein YP_003993934.1 KEGG: amt:Amet_1753 transposase YP_003993935.1 PFAM: sulfatase; KEGG: eum:ECUMN_4210 sulfatase/phosphatase YP_003993936.1 KEGG: ctc:CTC00514 symporter YidK; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003993937.1 PFAM: ROK family protein; KEGG: hor:Hore_20690 ROK family protein YP_003993938.1 PFAM: aldo/keto reductase; KEGG: gym:GYMC10_1614 aldo/keto reductase YP_003993939.1 PFAM: Acetamidase/Formamidase; KEGG: tte:TTE0307 acetamidase/formamidase YP_003993940.1 KEGG: tet:TTHERM_00836670 hypothetical protein YP_003993941.1 PFAM: protein of unknown function DUF328; KEGG: fnu:FN1762 hypothetical protein YP_003993942.1 KEGG: nth:Nther_0638 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_003993943.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_003993944.1 KEGG: nth:Nther_2186 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_003993945.1 PFAM: transposase IS4 family protein; KEGG: swo:Swol_0138 hypothetical protein YP_003993946.1 PFAM: protein of unknown function DUF1312; KEGG: amt:Amet_0355 hypothetical protein YP_003993947.1 KEGG: dhd:Dhaf_0799 phosphoribosylaminoimidazolesuccinocarboxamide synthase; PFAM: SAICAR synthetase YP_003993948.1 KEGG: dha:DEHA2G05082g DEHA2G05082p YP_003993949.1 KEGG: hor:Hore_15290 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003993952.1 KEGG: pfh:PFHG_04030 hypothetical protein YP_003993953.1 KEGG: hvo:HVO_1832 multi antimicrobial extrusion family drug/sodium antiporter; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003993954.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: afn:Acfer_0428 CMP/dCMP deaminase zinc-binding protein YP_003993955.1 PFAM: Uncharacterised protein family UPF0066; KEGG: fpl:Ferp_1301 protein of unknown function UPF0066 YP_003993956.1 manually curated; KEGG: dat:HRM2_35820 hypothetical protein YP_003993957.1 PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; KEGG: mrb:Mrub_0877 ATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp YP_003993958.1 PFAM: esterase; KEGG: sga:GALLO_1493 hypothetical protein YP_003993959.1 PFAM: esterase; KEGG: gym:GYMC10_5269 esterase YP_003993960.1 PFAM: ROK family protein; regulatory protein MarR; KEGG: hor:Hore_20690 ROK family protein YP_003993961.1 KEGG: hor:Hore_20680 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003993962.1 KEGG: hor:Hore_20660 galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein YP_003993963.1 KEGG: tte:TTE1929 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_003993964.1 SMART: regulatory protein ArsR; KEGG: hor:Hore_20640 regulatory protein ArsR YP_003993965.1 PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_0404 sugar transporter sugar binding protein YP_003993966.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_0405 ABC-type sugar transport systems, permease components YP_003993967.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0400 sugar ABC transporter permease YP_003993968.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: gtn:GTNG_0407 hydrolase YP_003993969.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; metal dependent phophohydrolase; PFAM: GGDEF domain containing protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: swo:Swol_2483 PAS/PAC sensor protein; SMART: GGDEF domain containing protein; PAS domain containing protein; metal-dependent phosphohydrolase HD region YP_003993970.1 KEGG: sat:SYN_03100 hypothetical protein YP_003993971.1 KEGG: mev:Metev_0975 beta-Ig-H3/fasciclin; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin YP_003993972.1 PFAM: Transaldolase; KEGG: cby:CLM_3877 transaldolase YP_003993973.1 PFAM: aminotransferase class IV; KEGG: cno:NT01CX_0378 4-amino-4-deoxychorismate lyase YP_003993974.1 KEGG: amt:Amet_2158 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_003993975.1 manually curated; TIGRFAM: glutamine amidotransferase of anthranilate synthase; KEGG: cno:NT01CX_0380 anthranilate synthase component II; PFAM: glutamine amidotransferase class-I YP_003993976.1 PFAM: Citrate transporter; KEGG: oih:OB2630 hypothetical protein YP_003993977.1 PFAM: 2-phosphosulfolactate phosphatase; KEGG: ttu:TERTU_0169 2-phosphosulfolactate phosphatase YP_003993978.1 KEGG: tit:Thit_2027 PTS modulated transcriptional regulator, MtlR family; PFAM: PRD domain protein; M trans-acting positive regulator; phosphotransferase system lactose/cellobiose-specific IIB subunit; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_003993979.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: tmt:Tmath_0211 PTS IIA-like nitrogen-regulatory protein PtsN YP_003993980.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: str:Sterm_0033 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_003993981.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: tte:TTE0183 hypothetical protein YP_003993982.1 PFAM: nitrogen regulatory protein P-II; KEGG: tmt:Tmath_1323 nitrogen regulatory protein P-II YP_003993983.1 KEGG: cbh:CLC_3303 sigma-54 dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PRD domain protein; PTS system fructose subfamily IIA component; SMART: AAA ATPase YP_003993984.1 KEGG: tpd:Teth39_0679 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003993985.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: tit:Thit_0294 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_003993986.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: tex:Teth514_0262 PTS system lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003993987.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: tte:TTE0336 phosphotransferase system cellobiose-specific component IIA YP_003993988.1 PFAM: glycoside hydrolase family 4; KEGG: tte:TTE0337 alpha-galactosidase/6-phospho-beta-glucosidase YP_003993989.1 PFAM: glycoside hydrolase family 1; KEGG: tit:Thit_0299 glycoside hydrolase family 1 YP_003993990.1 KEGG: cac:CA_C3035 HAD family phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003993991.1 PFAM: OmpA/MotB domain protein; KEGG: nwi:Nwi_1814 OmpA/MotB YP_003993992.1 PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: bbe:BBR47_00420 probable transcriptional antiterminator YP_003993993.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; KEGG: tmt:Tmath_0524 PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_003993994.1 KEGG: gtn:GTNG_0878 PTS system, glucose-specific IIABC component; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain YP_003993995.1 KEGG: hor:Hore_22920 glucosamine-6-phosphate isomerase; TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase YP_003993996.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: hor:Hore_22930 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003993997.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase YP_003993998.1 PFAM: Integrase catalytic region; KEGG: tte:TTE2218 transposase YP_003993999.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: vex:VEA_003224 mannose-6-phosphate isomerase YP_003994000.1 PFAM: Auxin Efflux Carrier; KEGG: tpd:Teth39_0593 auxin efflux carrier YP_003994001.1 KEGG: tpd:Teth39_0679 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003994002.1 KEGG: chy:CHY_0189 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003994003.1 KEGG: tmt:Tmath_2132 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003994004.1 KEGG: hor:Hore_09550 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994005.1 PFAM: inner-membrane translocator; KEGG: ctc:CTC00906 ribose transport system permease protein RbsC YP_003994006.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tpd:Teth39_2038 monosaccharide-transporting ATPase YP_003994007.1 KEGG: tpd:Teth39_0790 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component YP_003994008.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: bha:BH0777 acetoin dehydrogenase (TPP-dependent) beta chain YP_003994009.1 KEGG: bpu:BPUM_1173 branched-chain alpha-keto acid dehydrogenase subunit E2; manually curated; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003994010.1 PFAM: inner-membrane translocator; KEGG: pin:Ping_2789 ABC ribose transporter permease component YP_003994011.1 PFAM: inner-membrane translocator; KEGG: pin:Ping_2788 ABC-type transporter for ribose/xylose/arabinose/galactoside systems, permease protein YP_003994012.1 KEGG: pin:Ping_2790 bifunctional carbohydrate binding and transport protein YP_003994013.1 KEGG: pin:Ping_2787 ABC transporter for sugar (aldose) ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994014.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kol:Kole_0987 oxidoreductase domain protein YP_003994015.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: dfe:Dfer_3708 xylose isomerase domain protein TIM barrel YP_003994016.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dth:DICTH_0305 sorbitol-6-phosphate dehydrogenase YP_003994017.1 PFAM: peptidase M24; creatinase; KEGG: bra:BRADO6608 aminopeptidase; proline or methionine dipeptidase YP_003994018.1 KEGG: cdl:CDR20291_2231 succinate-semialdehyde dehydrogenase [NAD(P)+] YP_003994019.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: dal:Dalk_3783 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003994020.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; KEGG: hut:Huta_0439 succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003994021.1 KEGG: chy:CHY_0713 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003994022.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: bbe:BBR47_13780 probable NAD-dependent malic enzyme YP_003994023.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: bsu:BSU29220 NADP-dependent malic enzyme (conversion of malate into pyruvate) YP_003994024.1 KEGG: ngr:NAEGRDRAFT_71465 hypothetical protein YP_003994025.1 PFAM: Protein of unknown function DUF2088; KEGG: aco:Amico_1304 protein of unknown function DUF2088 YP_003994026.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: tte:TTE0981 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_003994027.1 KEGG: pmo:Pmob_0980 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003994028.1 PFAM: UspA domain-containing protein; KEGG: mmh:Mmah_0420 UspA domain protein YP_003994029.1 KEGG: bts:Btus_0584 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase YP_003994030.1 KEGG: hor:Hore_15270 hypothetical protein YP_003994031.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: nth:Nther_2443 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_003994032.1 KEGG: tte:TTE1820 phosphotransferase system, HPr-related proteins; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003994033.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: nth:Nther_2187 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_003994034.1 PFAM: Late competence development protein ComFB; KEGG: hor:Hore_19130 hypothetical protein YP_003994035.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: nth:Nther_2443 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_003994036.1 KEGG: hor:Hore_22670 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003994037.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; KEGG: glo:Glov_1550 multi-sensor hybrid histidine kinase; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003994038.1 PFAM: Methyltransferase type 11; KEGG: bse:Bsel_0277 methyltransferase type 11 YP_003994039.1 PFAM: cobalamin B12-binding domain protein; KEGG: drt:Dret_1529 cobalamin B12-binding domain protein YP_003994040.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: drt:Dret_1528 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003994041.1 KEGG: sat:SYN_02589 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_003994042.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: abu:Abu_2317 GGDEF/PAS domain-containing protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_003994043.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: nth:Nther_2450 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_003994044.1 KEGG: mfs:MFS40622_1582 hypothetical protein YP_003994045.1 KEGG: rxy:Rxyl_1031 L-glutamine synthetase; PFAM: glutamine synthetase catalytic region YP_003994046.1 PFAM: glutamine amidotransferase class-II; KEGG: pub:SAR11_1306 glutamine amidotransferase-like protein YP_003994047.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: msi:Msm_0369 glutamate synthase, subunit 3 YP_003994048.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mka:MK0550 glutamate synthase subunit 2 YP_003994049.1 KEGG: ckl:CKL_2061 hypothetical protein YP_003994050.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ckr:CKR_1805 hypothetical protein YP_003994051.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ckr:CKR_1803 hypothetical protein YP_003994052.1 PFAM: FAD dependent oxidoreductase; KEGG: kol:Kole_1011 FAD dependent oxidoreductase YP_003994053.1 PFAM: Endoribonuclease L-PSP; KEGG: lba:Lebu_1744 endoribonuclease L-PSP YP_003994054.1 KEGG: cja:CJA_0343 rhs repeat family YP_003994055.1 KEGG: cno:NT01CX_0321 helicase, PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003994056.1 PFAM: histidine triad (HIT) protein; KEGG: cbi:CLJ_B2118 HIT family protein YP_003994057.1 KEGG: bfo:BRAFLDRAFT_92229 hypothetical protein YP_003994058.1 KEGG: cbt:CLH_1932 hypothetical protein YP_003994059.1 PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911 YP_003994060.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: aoe:Clos_0736 integrase catalytic region YP_003994061.1 SMART: AAA ATPase; KEGG: mru:mru_0323 dnd system-associated protein 2 YP_003994062.1 KEGG: tpe:Tpen_1001 HhH-GPD family protein; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein YP_003994063.1 KEGG: cbk:CLL_A0606 DNA mismatch repair enzyme MutH; PFAM: DNA mismatch repair protein MutH, conserved region YP_003994064.1 TIGRFAM: DNA-cytosine methyltransferase; KEGG: cbk:CLL_A0608 DNA-cytosine methyltransferase family protein; PFAM: C-5 cytosine-specific DNA methylase YP_003994065.1 KEGG: cai:Caci_5190 protein of unknown function DUF541 YP_003994066.1 KEGG: nde:NIDE3990 hypothetical protein YP_003994067.1 KEGG: cbf:CLI_3295 hypothetical protein YP_003994068.1 KEGG: dau:Daud_1668 hypothetical protein YP_003994069.1 KEGG: ehi:EHI_093890 hypothetical protein YP_003994070.1 KEGG: bha:BH3966 transposase (23); PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_003994071.1 PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911 YP_003994072.1 KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region YP_003994073.1 KEGG: maq:Maqu_1265 hypothetical protein YP_003994074.1 KEGG: sep:SE1476 hypothetical protein YP_003994075.1 PFAM: SEC-C motif domain protein; KEGG: mrd:Mrad2831_3156 SecC motif-containing protein YP_003994076.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: kol:Kole_0452 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; GAF domain protein; metal-dependent phosphohydrolase HD region YP_003994077.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cno:NT01CX_0287 glycerol dehydrogenase YP_003994079.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: ton:TON_1608 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_003994080.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: sme:SMc02334 pentose kinase transmembrane protein YP_003994081.1 PFAM: alpha/beta hydrolase fold; KEGG: ckr:CKR_0469 hypothetical protein YP_003994082.1 PFAM: protein of unknown function DUF81; KEGG: ere:EUBREC_0507 hypothetical protein YP_003994083.1 KEGG: dae:Dtox_0544 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003994084.1 KEGG: dae:Dtox_0545 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003994085.1 KEGG: nth:Nther_0989 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003994086.1 PFAM: Integrase catalytic region; KEGG: cth:Cthe_3182 integrase catalytic subunit YP_003994087.1 KEGG: mms:mma_2823 hypothetical protein YP_003994088.1 KEGG: dal:Dalk_4228 conserved repeat domain protein; TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Two component regulator three Y domain-containing protein YP_003994089.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: slt:Slit_2775 short-chain dehydrogenase/reductase SDR YP_003994090.1 SMART: GGDEF domain containing protein; manually curated; TIGRFAM: diguanylate cyclase; KEGG: amt:Amet_3753 diguanylate cyclase and metal dependent phosphohydrolase; PFAM: GGDEF domain containing protein YP_003994091.1 KEGG: cbi:CLJ_0076 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003994092.1 KEGG: tte:TTE1101 CheY-like domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003994093.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; PAS fold-4 domain protein; KEGG: dth:DICTH_1580 response regulator; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein YP_003994094.1 KEGG: tva:TVAG_011120 hypothetical protein YP_003994095.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: str:Sterm_3135 phosphotransferase KptA/Tpt1 YP_003994096.1 PFAM: Phosphoglycerate mutase; KEGG: cth:Cthe_0707 phosphoglycerate mutase YP_003994097.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: cac:CA_C1479 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003994098.1 KEGG: pol:Bpro_1645 hypothetical protein YP_003994099.1 TIGRFAM: chorismate synthase; KEGG: cpy:Cphy_3093 chorismate synthase; PFAM: chorismate synthase YP_003994100.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: det:DET0125 alcohol dehydrogenase, zinc-containing YP_003994101.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: dae:Dtox_1582 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_003994102.1 KEGG: dat:HRM2_16010 hypothetical protein YP_003994103.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: dat:HRM2_37860 DraG2 YP_003994104.1 KEGG: hor:Hore_04130 hypothetical protein YP_003994105.1 PFAM: UvrD/REP helicase; KEGG: hor:Hore_04140 UvrD/REP helicase YP_003994106.1 PFAM: periplasmic solute binding protein; KEGG: gym:GYMC10_3445 periplasmic solute binding protein YP_003994107.1 KEGG: amt:Amet_1173 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994108.1 PFAM: ABC-3 protein; KEGG: amt:Amet_1174 ABC-3 protein YP_003994110.1 KEGG: fgr:FG07812.1 hypothetical protein YP_003994111.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: pjd:Pjdr2_0616 metal dependent phosphohydrolase YP_003994112.1 PFAM: TrkA-C domain protein; KEGG: dau:Daud_0860 TrkA domain-containing protein YP_003994113.1 PFAM: sodium/hydrogen exchanger; KEGG: dau:Daud_0861 sodium/hydrogen exchanger YP_003994114.1 KEGG: dhd:Dhaf_0984 molybdopterin converting factor, subunit 2 YP_003994115.1 KEGG: amt:Amet_3741 hypothetical protein YP_003994116.1 PFAM: protein of unknown function DUF77; KEGG: hor:Hore_03360 conserved hypothetical protein TIGR00106 YP_003994117.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: cdf:CD1506 drug/sodium antiporters YP_003994118.1 PFAM: regulatory protein TetR; KEGG: ckr:CKR_2227 hypothetical protein YP_003994119.1 KEGG: llo:LLO_1829 hypothetical protein YP_003994120.1 PFAM: regulatory protein TetR; KEGG: hor:Hore_23280 transcriptional regulator, TetR family YP_003994121.1 KEGG: hor:Hore_23250 ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994122.1 PFAM: protein of unknown function DUF214; KEGG: hor:Hore_23240 ABC-type transport system, involved in lipoprotein release, permease component YP_003994123.1 PFAM: protein of unknown function DUF214; KEGG: hor:Hore_23230 ABC-type transport system, involved in lipoprotein release, permease component YP_003994124.1 KEGG: hor:Hore_23220 sigma E regulatory protein, MucB/RseB YP_003994125.1 KEGG: hor:Hore_23210 hypothetical protein YP_003994126.1 KEGG: pho:PH1048 hypothetical protein YP_003994127.1 KEGG: clj:CLJU_c27920 hypothetical protein YP_003994128.1 PFAM: nitroreductase; KEGG: clj:CLJU_c27930 NAD(P)H-flavin oxidoreductase YP_003994129.1 PFAM: purine catabolism PurC domain protein; helix-turn-helix Fis-type; KEGG: dsy:DSY4159 hypothetical protein YP_003994130.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: tsi:TSIB_0561 hydantoin racemase YP_003994131.1 PFAM: protein of unknown function DUF1177; KEGG: cdl:CDR20291_0709 hypothetical protein YP_003994132.1 PFAM: extracellular solute-binding protein family 5; KEGG: hvo:HVO_B0082 ABC-type transport system periplasmic substrate-binding protein (probable substrate dipeptides/oligopeptides) YP_003994133.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hvo:HVO_B0081 ABC-type transport system permease protein (probable substrate dipeptides/oligopeptides) YP_003994134.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hvo:HVO_B0080 ABC-type transport system permease protein (probable substrate dipeptides/oligopeptides) YP_003994135.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_1565 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_003994136.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_1566 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_003994137.1 KEGG: drm:Dred_1548 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; manually curated; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003994138.1 PFAM: NUDIX hydrolase; KEGG: hor:Hore_13970 NUDIX hydrolase YP_003994139.1 PFAM: phosphofructokinase; KEGG: csc:Csac_2366 6-phosphofructokinase YP_003994140.1 PFAM: fructose-bisphosphate aldolase class-I; KEGG: oih:OB3245 fructose-1,6-bisphosphate aldolase YP_003994141.1 KEGG: hor:Hore_02610 hypothetical protein YP_003994142.1 KEGG: nph:NP1660A hypothetical protein YP_003994143.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hje:HacjB3_00015 short-chain dehydrogenase/reductase SDR YP_003994144.1 PFAM: fructose-bisphosphate aldolase class-I; KEGG: oih:OB3245 fructose-1,6-bisphosphate aldolase YP_003994145.1 manually curated; KEGG: gbm:Gbem_0515 hypothetical protein YP_003994146.1 KEGG: bpf:BpOF4_09750 transcriptional regulator; PFAM: GAF domain protein; SMART: GAF domain protein YP_003994147.1 KEGG: amt:Amet_2942 membrane protein YP_003994148.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: lsg:lse_0451 amidase, hydantoinase/carbamoylase family protein; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003994149.1 TIGRFAM: amidohydrolase; KEGG: cdf:CD1086 peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003994150.1 TIGRFAM: amidohydrolase; KEGG: cdf:CD1086 peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003994151.1 PFAM: methylpurine-DNA glycosylase (MPG); KEGG: nth:Nther_0710 DNA-3-methyladenine glycosylase YP_003994152.1 PFAM: Aldose 1-epimerase; KEGG: cac:CA_C3032 galactose mutarotase-like protein YP_003994153.1 PFAM: Iron sulphur-containing domain, CDGSH-type; KEGG: dhd:Dhaf_0591 zinc finger CDGSH-type domain protein YP_003994154.1 KEGG: dpo:Dpse_GA10113 GA10113 gene product from transcript GA10113-RA YP_003994155.1 PFAM: Pirin domain protein; KEGG: chu:CHU_3010 pirin-related protein YP_003994156.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: nth:Nther_2450 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; metal-dependent phosphohydrolase HD region YP_003994157.1 PFAM: CoA-binding domain protein; KEGG: cth:Cthe_2077 CoA-binding protein YP_003994158.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: drt:Dret_2332 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003994159.1 PFAM: peptidase M48 Ste24p; KEGG: dsy:DSY2106 hypothetical protein YP_003994160.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: syn:slr0338 hypothetical protein YP_003994161.1 KEGG: mru:mru_1959 aminotransferase DegT/DnrJ/EryC1/StrS family; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_003994162.1 KEGG: mba:Mbar_A2356 hypothetical protein YP_003994163.1 KEGG: mem:Memar_2035 nitroreductase; TIGRFAM: SagB-type dehydrogenase domain; PFAM: nitroreductase YP_003994164.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: hor:Hore_20800 tRNA-adenosine deaminase YP_003994165.1 SMART: AAA ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; KEGG: hor:Hore_20790 DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein YP_003994166.1 PFAM: Uncharacterised protein family UPF0133; KEGG: hor:Hore_20780 conserved hypothetical protein TIGR00103 YP_003994167.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: hor:Hore_20770 recombination protein RecR; SMART: Toprim sub domain-containing protein YP_003994168.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: hor:Hore_20480 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_003994169.1 KEGG: hor:Hore_20410 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003994170.1 TIGRFAM: thymidylate kinase; KEGG: hor:Hore_20380 dTMP kinase; PFAM: thymidylate kinase YP_003994171.1 PFAM: protein of unknown function DUF970; KEGG: hor:Hore_20370 hypothetical protein YP_003994172.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: hor:Hore_20360 DNA polymerase III, delta prime subunit YP_003994173.1 PFAM: PSP1 domain protein; KEGG: hor:Hore_20350 PSP1 domain protein YP_003994174.1 PFAM: protein of unknown function DUF972; KEGG: hor:Hore_20340 hypothetical protein YP_003994175.1 PFAM: methyltransferase small; KEGG: tmt:Tmath_0149 methyltransferase small YP_003994176.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: hor:Hore_20320 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_003994177.1 KEGG: hor:Hore_20300 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein YP_003994178.1 PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; KEGG: hor:Hore_20290 redox-sensing transcriptional repressor REX YP_003994179.1 KEGG: hor:Hore_20260 beta-lactamase domain protein YP_003994180.1 PFAM: protein of unknown function DUF163; KEGG: hor:Hore_20240 conserved hypothetical protein TIGR00246 YP_003994181.1 KEGG: mmp:MMP1513 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003994182.1 TIGRFAM: alanine racemase; KEGG: hor:Hore_01680 alanine racemase; PFAM: alanine racemase domain protein YP_003994183.1 PFAM: Methyltransferase type 12; KEGG: sdl:Sdel_0109 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-ben zoquinolmethylase YP_003994184.1 KEGG: nwa:Nwat_2602 hypothetical protein YP_003994185.1 PFAM: OsmC family protein; KEGG: hor:Hore_04790 OsmC family protein YP_003994186.1 PFAM: 3H domain-containing protein; KEGG: tex:Teth514_0475 3H domain-containing protein YP_003994187.1 KEGG: oih:OB2241 hypothetical protein YP_003994188.1 PFAM: Na+/solute symporter; KEGG: oih:OB2242 pantothenate permease YP_003994189.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: hor:Hore_00620 quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_003994190.1 TIGRFAM: L-aspartate oxidase; KEGG: hor:Hore_00630 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003994191.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: hmo:HM1_0664 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003994192.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: hor:Hore_00620 quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_003994193.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: kol:Kole_0452 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_003994194.1 KEGG: hor:Hore_01900 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein YP_003994195.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: dhd:Dhaf_3394 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA YP_003994196.1 KEGG: tte:TTE1014 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase YP_003994197.1 KEGG: hor:Hore_10370 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003994198.1 KEGG: mta:Moth_0515 histidinol phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003994199.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: tmt:Tmath_1028 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003994200.1 TIGRFAM: chorismate synthase; KEGG: geo:Geob_3063 chorismate synthase; PFAM: chorismate synthase YP_003994201.1 KEGG: hor:Hore_21140 peptidil-prolyl cis-trans isomerase YP_003994202.1 KEGG: tjr:TherJR_1220 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_003994203.1 KEGG: bse:Bsel_2174 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003994204.1 PFAM: peptidase M18 aminopeptidase I; KEGG: hor:Hore_18140 aminopeptidase 1 YP_003994205.1 KEGG: hor:Hore_18130 glutaredoxin-like domain protein; TIGRFAM: glutaredoxin-like domain protein; PFAM: glutaredoxin YP_003994206.1 KEGG: hor:Hore_18120 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_003994207.1 KEGG: hor:Hore_18090 hypothetical protein YP_003994208.1 PFAM: Domain of unknown function DUF1934; KEGG: hor:Hore_18080 hypothetical protein YP_003994209.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: sat:SYN_00994 arginyl-tRNA synthetase YP_003994210.1 TIGRFAM: CTP synthase; KEGG: hor:Hore_18060 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003994211.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: tte:TTE0544 3-hydroxybutyryl-CoA dehydratase YP_003994212.1 KEGG: hor:Hore_18030 hypothetical protein YP_003994213.1 TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: hor:Hore_18020 fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II YP_003994214.1 PFAM: sodium/calcium exchanger membrane region; KEGG: amt:Amet_0140 sodium/calcium exchanger membrane region YP_003994215.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: hor:Hore_18010 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_003994216.1 KEGG: hor:Hore_18000 ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_003994217.1 KEGG: hor:Hore_17990 thymidine kinase; PFAM: thymidine kinase YP_003994218.1 KEGG: hor:Hore_17970 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_003994219.1 TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; KEGG: hor:Hore_17960 modification methylase, HemK family; PFAM: methyltransferase small YP_003994220.1 KEGG: hor:Hore_17950 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein YP_003994221.1 KEGG: hor:Hore_17930 ribose-5-phosphate isomerase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003994222.1 KEGG: hor:Hore_17920 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003994223.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: hor:Hore_17910 glycosyl transferase family 4 YP_003994224.1 KEGG: hor:Hore_17890 hypothetical protein YP_003994225.1 KEGG: hor:Hore_17870 ATP synthase F0, A subunit; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_003994226.1 KEGG: hor:Hore_17860 ATP synthase F0, C subunit; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_003994227.1 KEGG: hor:Hore_17880 hypothetical protein YP_003994228.1 KEGG: hor:Hore_17860 ATP synthase F0, C subunit; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_003994229.1 KEGG: hor:Hore_17840 ATP synthase F0, B subunit; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_003994230.1 KEGG: hor:Hore_17830 ATP synthase F1, delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_003994231.1 KEGG: hor:Hore_17820 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003994232.1 KEGG: hor:Hore_17810 ATP synthase F1, gamma subunit; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_003994233.1 TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: hor:Hore_17800 ATP synthase F1, beta subunit; SMART: AAA ATPase YP_003994234.1 KEGG: hor:Hore_17790 ATP synthase F1, epsilon subunit; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like YP_003994235.1 PFAM: protein of unknown function DUF1694; KEGG: hor:Hore_17780 hypothetical protein YP_003994236.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: hor:Hore_17770 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003994237.1 PFAM: PfkB domain protein; KEGG: tnp:Tnap_0099 1-phosphofructokinase YP_003994238.1 manually curated; PFAM: CBS domain containing protein; KEGG: tle:Tlet_1060 signal transduction protein; SMART: CBS domain containing protein YP_003994239.1 PFAM: sodium/hydrogen exchanger; KEGG: nth:Nther_0276 sodium/hydrogen exchanger YP_003994240.1 KEGG: hor:Hore_17730 rod shape-determining protein Mbl; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_003994241.1 KEGG: hor:Hore_17720 hypothetical protein YP_003994242.1 PFAM: protein of unknown function DUF490; KEGG: hor:Hore_17710 hypothetical protein YP_003994243.1 PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: hor:Hore_17680 surface antigen (D15) YP_003994244.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: hor:Hore_17670 outer membrane chaperone Skp (OmpH) YP_003994245.1 KEGG: dre:100007727 GTPase, IMAP family member 4-like YP_003994246.1 KEGG: ngr:NAEGRDRAFT_47230 hypothetical protein YP_003994247.1 KEGG: hor:Hore_17640 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_003994248.1 KEGG: hor:Hore_17570 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_003994249.1 KEGG: hor:Hore_17560 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase;3-hydroxyacyl-(acyl-carrier-protein) dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003994250.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: hor:Hore_17550 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_003994251.1 PFAM: protein of unknown function DUF1009; KEGG: hor:Hore_17540 hypothetical protein YP_003994252.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: hor:Hore_17530 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_003994253.1 PFAM: protein of unknown function DUF1239; KEGG: hor:Hore_17520 protein of unknown function (DUF1239) YP_003994254.1 PFAM: OstA family protein; KEGG: hor:Hore_17510 hypothetical protein YP_003994255.1 KEGG: hor:Hore_17500 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994256.1 PFAM: permease YjgP/YjgQ family protein; KEGG: hor:Hore_17490 permease YjgP/YjgQ family protein YP_003994257.1 KEGG: hor:Hore_17480 hypothetical protein YP_003994258.1 SMART: Resolvase RNase H domain protein fold; KEGG: hor:Hore_17470 resolvase RNase H domain protein fold protein YP_003994259.1 PFAM: S-layer domain-containing protein; KEGG: hor:Hore_17460 S-layer domain protein YP_003994260.1 KEGG: afn:Acfer_1325 OmpA/MotB domain protein YP_003994261.1 PFAM: Integrase catalytic region; KEGG: tjr:TherJR_2621 integrase catalytic region YP_003994262.1 PFAM: S-layer domain-containing protein; KEGG: hor:Hore_17460 S-layer domain protein YP_003994263.1 KEGG: mmp:MMP0739 Asp/Glu racemase:aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003994264.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aoe:Clos_2737 glyoxalase/bleomycin resistance protein/dioxygenase YP_003994265.1 PFAM: cation transporter; KEGG: bvu:BVU_3781 trk system K+ uptake protein TrkH YP_003994266.1 PFAM: S-layer domain-containing protein; KEGG: hor:Hore_17460 S-layer domain protein YP_003994267.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: pth:PTH_0546 hypothetical protein; SMART: GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_003994268.1 KEGG: mvn:Mevan_0278 cell surface protein YP_003994269.1 KEGG: vsa:VSAL_p320_02 hypothetical protein YP_003994270.1 KEGG: str:Sterm_1092 hypothetical protein YP_003994271.1 PFAM: S-layer domain-containing protein; KEGG: hor:Hore_17460 S-layer domain protein YP_003994272.1 KEGG: cbi:CLJ_0035 transposase, family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003994273.1 KEGG: hor:Hore_17450 hypothetical protein YP_003994274.1 KEGG: hor:Hore_17430 organic solvent tolerance protein OstA YP_003994275.1 KEGG: hor:Hore_17420 hypothetical protein YP_003994276.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: hor:Hore_17410 alpha-phosphoglucomutase YP_003994277.1 PFAM: Patatin; KEGG: afl:Aflv_1848 predicted esterase of the alpha-beta hydrolase superfamily YP_003994278.1 KEGG: hor:Hore_17370 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_003994279.1 KEGG: hor:Hore_17240 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003994280.1 PFAM: Sporulation domain-containing protein; KEGG: hor:Hore_16520 SpoIID/LytB domain protein YP_003994281.1 KEGG: hor:Hore_16510 hypothetical protein YP_003994282.1 PFAM: PfkB domain protein; KEGG: hor:Hore_16505 Rfae domain I YP_003994283.1 KEGG: hor:Hore_16500 RfaeE domain II; TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003994284.1 KEGG: hor:Hore_16490 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003994285.1 PFAM: phosphoribosyltransferase; KEGG: hor:Hore_16480 amidophosphoribosyltransferase YP_003994286.1 KEGG: hor:Hore_16460 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_003994287.1 KEGG: amr:AM1_3302 hypothetical protein YP_003994289.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: btb:BMB171_C2085 thermitase YP_003994290.1 PFAM: permease YjgP/YjgQ family protein; KEGG: hor:Hore_17610 permease YjgP/YjgQ family protein YP_003994291.1 PFAM: OstA family protein; KEGG: hor:Hore_17600 OstA family protein YP_003994292.1 KEGG: hor:Hore_09770 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003994293.1 KEGG: mba:Mbar_A0448 hypothetical protein YP_003994294.1 KEGG: pkn:PKH_081320 hypothetical protein YP_003994295.1 KEGG: drm:Dred_3226 Na+/H+ antiporter NhaC; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like YP_003994296.1 KEGG: swd:Swoo_0898 coenzyme PQQ synthesis protein B YP_003994297.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_1154 sensory box protein; SMART: GGDEF domain containing protein YP_003994298.1 KEGG: hor:Hore_16440 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_003994299.1 KEGG: hor:Hore_16430 peptide chain release factor 2; TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein YP_003994300.1 KEGG: hor:Hore_16410 hypothetical protein YP_003994301.1 TIGRFAM: polysaccharide pyruvyl transferase CsaB; KEGG: hor:Hore_16400 polysaccharide pyruvyl transferase YP_003994302.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: hor:Hore_16390 glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_003994303.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: hor:Hore_16380 hypothetical protein YP_003994304.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: hor:Hore_16350 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003994305.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: hor:Hore_16340 L-serine ammonia-lyase, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein YP_003994306.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; KEGG: hor:Hore_16330 L-serine ammonia-lyase, alpha subunit; PFAM: serine dehydratase alpha chain YP_003994307.1 KEGG: nwa:Nwat_1895 hypothetical protein YP_003994308.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: hor:Hore_16230 excinuclease ABC, B subunit; SMART: DEAD-like helicase ; helicase domain protein YP_003994309.1 KEGG: hor:Hore_16220 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_003994310.1 PFAM: extracellular solute-binding protein family 5; KEGG: nth:Nther_2201 extracellular solute-binding protein family 5 YP_003994311.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nth:Nther_2197 binding-protein-dependent transport systems inner membrane component YP_003994312.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nth:Nther_2198 binding-protein-dependent transport systems inner membrane component YP_003994313.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: hvo:HVO_B0024 ABC-type transport system ATP-binding protein (probable substrate dipeptides/oligopeptides); SMART: AAA ATPase YP_003994314.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: hor:Hore_08130 glycerol-3-phosphate responsive antiterminator YP_003994315.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cpr:CPR_0420 glycerophosphoryl diester phosphodiesterase YP_003994316.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: amt:Amet_0558 TRAP dicarboxylate transporter-DctP subunit YP_003994317.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: amt:Amet_0559 tripartite ATP-independent periplasmic transporter DctQ YP_003994318.1 KEGG: amt:Amet_0560 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_003994319.1 PFAM: MgtC/SapB transporter; KEGG: llc:LACR_1728 Mg2+ transporter YP_003994320.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cbt:CLH_1677 glycerophosphoryl diester phosphodiesterase family protein YP_003994321.1 KEGG: gwc:GWCH70_3248 protein of unknown function DUF1568 YP_003994322.1 KEGG: str:Sterm_2791 phosphotransferase system component YP_003994323.1 KEGG: cho:Chro.40489 adapter-related protein complex 1 beta 1 subunit (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta large chain) YP_003994324.1 KEGG: dhd:Dhaf_0495 response regulator receiver and SARP domain protein YP_003994325.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; helix-hairpin-helix motif; KEGG: hor:Hore_16210 excinuclease ABC, C subunit; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_003994326.1 KEGG: sfu:Sfum_3218 glutaredoxin; TIGRFAM: glutaredoxin 3; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin YP_003994327.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gym:GYMC10_2308 oxidoreductase domain protein YP_003994328.1 KEGG: tte:TTE1929 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_003994329.1 KEGG: dau:Daud_0059 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003994330.1 TIGRFAM: PAS sensor protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold domain protein; KEGG: dth:DICTH_1580 response regulator; SMART: metal-dependent phosphohydrolase HD region; PAS domain containing protein YP_003994331.1 SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region; manually curated; TIGRFAM: diguanylate cyclase; metal dependent phophohydrolase; KEGG: nth:Nther_2110 diguanylate cyclase and metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GGDEF domain containing protein YP_003994332.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: cpc:Cpar_1325 multi-sensor hybrid histidine kinase; SMART: PAC repeat-containing protein; PAS domain containing protein YP_003994333.1 KEGG: mev:Metev_2351 periplasmic copper-binding protein YP_003994334.1 TIGRFAM: glycerate kinase; KEGG: hor:Hore_22950 glycerate kinase; PFAM: glycerate kinase YP_003994335.1 KEGG: hmo:HM1_1037 glutamate synthase [nadph] large chain; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein YP_003994336.1 KEGG: syn:sll1027 NADH-glutamate synthase small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003994337.1 KEGG: hor:Hore_18770 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003994338.1 KEGG: hor:Hore_18760 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003994339.1 KEGG: kol:Kole_0125 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994340.1 KEGG: kol:Kole_0126 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003994341.1 KEGG: spe:Spro_2461 alkylglycerone-phosphate synthase; PFAM: FAD linked oxidase domain protein YP_003994342.1 PFAM: major facilitator superfamily MFS_1; KEGG: vei:Veis_2908 major facilitator transporter YP_003994343.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: taf:THA_731 electron transfer flavoprotein subunit beta YP_003994344.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: taf:THA_732 electron transfer flavoprotein subunit alpha YP_003994345.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoi:ECO111_3498 deoxygluconate dehydrogenase YP_003994346.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: cko:CKO_04132 hypothetical protein YP_003994347.1 PFAM: BCCT transporter; KEGG: afl:Aflv_1187 choline-glycine betaine transporter YP_003994348.1 KEGG: mev:Metev_1129 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_003994349.1 PFAM: sugar isomerase (SIS); KEGG: llm:llmg_1462 HTH-type transcriptional regulator YP_003994350.1 PFAM: Patatin; KEGG: cno:NT01CX_0225 patatin-like phospholipase YP_003994351.1 manually curated; PFAM: alpha amylase catalytic region; KEGG: hor:Hore_02410 alpha amylase; SMART: alpha amylase catalytic sub domain YP_003994352.1 KEGG: bbe:BBR47_58750 two-component hybrid sensor and regulator; PFAM: histidine kinase internal region; response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein YP_003994353.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: hor:Hore_05220 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003994354.1 KEGG: bbe:BBR47_58760 probable two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_003994355.1 PFAM: response regulator receiver; KEGG: fnu:FN0219 autolysin response regulator YP_003994356.1 KEGG: gem:GM21_0436 OmpA/MotB domain protein YP_003994357.1 TIGRFAM: conserved repeat domain protein; KEGG: hch:HCH_03195 RTX toxins and related Ca2+-binding protein YP_003994358.1 manually curated; TIGRFAM: conserved repeat domain protein; KEGG: gur:Gura_3080 hypothetical protein; PFAM: Cna B domain protein YP_003994359.1 KEGG: lbf:LBF_3185 hypothetical protein YP_003994360.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: nth:Nther_0783 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; metal-dependent phosphohydrolase HD region YP_003994362.1 KEGG: pmo:Pmob_0207 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_003994363.1 PFAM: Integrase catalytic region; KEGG: aoe:Clos_0736 integrase catalytic region YP_003994364.1 PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase YP_003994365.1 KEGG: mba:Mbar_A0416 hypothetical protein; PFAM: flagellin domain protein; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_003994366.1 PFAM: flagellin domain protein; KEGG: tex:Teth514_0456 flagellin domain-containing protein YP_003994367.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: cac:CA_C3514 reverse transcriptase/maturase family protein YP_003994368.1 KEGG: tko:TK0471 transcription regulator YP_003994369.1 KEGG: hut:Huta_2080 GLUG domain protein YP_003994370.1 PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase YP_003994371.1 PFAM: Integrase catalytic region; KEGG: aoe:Clos_0736 integrase catalytic region YP_003994372.1 KEGG: cno:NT01CX_1523 capsular polysaccharide biosynthesis protein Cap1B; TIGRFAM: capsular exopolysaccharide family YP_003994373.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: hor:Hore_22220 lipopolysaccharide biosynthesis protein YP_003994374.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: kol:Kole_0012 polysaccharide export protein YP_003994375.1 PFAM: PHP domain protein; KEGG: cno:NT01CX_1524 CpsB protein YP_003994376.1 PFAM: OmpA/MotB domain protein; KEGG: hch:HCH_04311 outer membrane protein and related peptidoglycan-associated (LipO)protein YP_003994377.1 PFAM: SEC-C motif domain protein; KEGG: oih:OB1032 hypothetical protein YP_003994378.1 KEGG: dae:Dtox_0527 hypothetical protein YP_003994379.1 KEGG: chy:CHY_1254 sigma-54 dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein YP_003994380.1 PFAM: type III effector Hrp-dependent outers; KEGG: chy:CHY_1258 hypothetical protein YP_003994381.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: amt:Amet_0228 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_003994382.1 PFAM: dihydrodipicolinate synthetase; KEGG: ddr:Deide_3p01100 dihydrodipicolinate synthase YP_003994383.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bld:BLi03701 hypothetical protein YP_003994384.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: asu:Asuc_1579 TRAP dicarboxylate transporter, DctP subunit YP_003994385.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aco:Amico_0089 tripartite ATP-independent periplasmic transporter DctQ component YP_003994386.1 KEGG: csa:Csal_0269 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_003994387.1 PFAM: major facilitator superfamily MFS_1; KEGG: nth:Nther_2806 major facilitator superfamily MFS_1 YP_003994388.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpu:BPUM_2971 3-oxoacyl-[acyl-carrier-protein] reductase YP_003994389.1 KEGG: mno:Mnod_8131 BNR repeat-containing glycosyl hydrolase YP_003994391.1 PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911 YP_003994392.1 KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region YP_003994393.1 PFAM: glycosyl transferase group 1; KEGG: bwe:BcerKBAB4_5067 glycosyl transferase group 1 YP_003994394.1 PFAM: sugar transferase; KEGG: nis:NIS_1249 undecaprenyl-phosphate galactose phosphotransferase YP_003994395.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: hor:Hore_16970 DegT/DnrJ/EryC1/StrS aminotransferase YP_003994396.1 PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase YP_003994397.1 PFAM: Integrase catalytic region; KEGG: aoe:Clos_0736 integrase catalytic region YP_003994398.1 PFAM: glycosyl transferase group 1; KEGG: vex:VEA_001768 glycosyl transferase group 1 YP_003994399.1 PFAM: Integrase catalytic region; KEGG: cpr:CPR_0383 IS1470, transposase YP_003994400.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: syp:SYNPCC7002_A1819 NAD-dependent epimerase/dehydratase family protein YP_003994401.1 KEGG: hor:Hore_22860 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II YP_003994402.1 KEGG: pth:PTH_2567 phosphohydrolases YP_003994403.1 KEGG: plu:plu0153 hypothetical protein; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003994404.1 KEGG: ptm:GSPATT00017706001 hypothetical protein YP_003994405.1 KEGG: ate:Athe_1661 hypothetical protein YP_003994406.1 KEGG: ate:Athe_1661 hypothetical protein YP_003994407.1 PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911 YP_003994408.1 KEGG: ate:Athe_1660 Appr-1-p processing domain protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_003994409.1 KEGG: tit:Thit_2096 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003994410.1 PFAM: protein of unknown function DUF955; KEGG: ate:Athe_2671 protein of unknown function DUF955 YP_003994411.1 PFAM: HIRAN; KEGG: gct:GC56T3_1130 HIRAN domain protein YP_003994412.1 PFAM: helix-turn-helix domain protein; KEGG: ate:Athe_2672 transcriptional regulator, XRE family YP_003994413.1 KEGG: ape:APE_1558b hypothetical protein YP_003994414.1 KEGG: bts:Btus_3190 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein YP_003994415.1 PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911 YP_003994416.1 KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region YP_003994417.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: ckr:CKR_2815 hypothetical protein YP_003994418.1 KEGG: dae:Dtox_0527 hypothetical protein YP_003994419.1 KEGG: rxy:Rxyl_0512 hypothetical protein YP_003994420.1 PFAM: Integrase catalytic region; KEGG: drm:Dred_0300 transposase YP_003994421.1 KEGG: drm:Dred_0299 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_003994422.1 PFAM: transposase IS200-family protein; KEGG: ana:alr7009 transposase YP_003994423.1 PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911 YP_003994424.1 KEGG: hmg:100210524 similar to coiled-coil and C2 domain containing 2A YP_003994425.1 PFAM: Integrase catalytic region; KEGG: aoe:Clos_0736 integrase catalytic region YP_003994426.1 PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase YP_003994427.1 KEGG: chy:CHY_0658 DNA-binding response regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_003994428.1 PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; KEGG: hor:Hore_10410 signal transduction histidine kinase, LytS YP_003994429.1 PFAM: TIM-barrel signal transduction protein; KEGG: ctc:CTC01797 sigma-54 interacting protein YP_003994430.1 KEGG: cbi:CLJ_0035 transposase, family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003994431.1 KEGG: ctc:CTC01797 sigma-54 interacting protein; PFAM: sigma-54 factor interaction domain-containing protein; TIM-barrel signal transduction protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003994432.1 PFAM: Uncharacterised conserved protein UCP033271; KEGG: nth:Nther_0882 hypothetical protein YP_003994433.1 PFAM: TIM-barrel signal transduction protein; KEGG: ctc:CTC01793 transcriptional regulator YP_003994434.1 KEGG: hor:Hore_22320 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter YP_003994435.1 KEGG: hor:Hore_17360 hypothetical protein YP_003994436.1 KEGG: srm:SRM_01195 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994437.1 PFAM: glycosyl transferase group 1; KEGG: mae:Maeo_0394 glycosyl transferase group 1 YP_003994438.1 KEGG: trq:TRQ2_0297 glycosyl transferase group 1 YP_003994439.1 KEGG: cbe:Cbei_4756 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_003994440.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: tye:THEYE_A0472 NAD-dependent epimerase/dehydratase family protein YP_003994441.1 KEGG: cbf:CLI_2749 exopolysaccharide biosynthesis protein YP_003994442.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: trq:TRQ2_0304 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003994443.1 PFAM: glycosyl transferase family 2; KEGG: lba:Lebu_2149 glycosyltransferase YP_003994444.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dae:Dtox_4129 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_003994445.1 KEGG: cts:Ctha_2070 hypothetical protein YP_003994446.1 PFAM: glycosyl transferase family 2; KEGG: str:Sterm_2405 glycosyl transferase family 2 YP_003994447.1 PFAM: glycosyl transferase family 2; KEGG: lpj:JDM1_1022 glycosyltransferase WelF YP_003994448.1 KEGG: tna:CTN_0033 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_003994449.1 PFAM: O-antigen polymerase; KEGG: dth:DICTH_0553 heptosyltransferase family YP_003994450.1 KEGG: ppr:PBPRA0352 intercellular adhesion protein A; PFAM: sugar transferase; glycosyl transferase family 2 YP_003994451.1 KEGG: hor:Hore_21910 hypothetical protein YP_003994452.1 PFAM: protein of unknown function DUF190; KEGG: msv:Mesil_2999 protein of unknown function DUF190 YP_003994453.1 PFAM: sodium/hydrogen exchanger; KEGG: amt:Amet_4404 sodium/hydrogen exchanger YP_003994454.1 PFAM: Methyltransferase type 11; KEGG: dae:Dtox_2552 methyltransferase type 11 YP_003994455.1 KEGG: dae:Dtox_2551 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003994456.1 KEGG: tex:Teth514_0120 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; PRD domain protein; PTS system fructose subfamily IIA component; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SMART: AAA ATPase YP_003994457.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cbe:Cbei_0541 PTS IIA-like nitrogen-regulatory protein PtsN YP_003994458.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: str:Sterm_0033 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_003994459.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: tte:TTE0183 hypothetical protein YP_003994461.1 PFAM: class II aldolase/adducin family protein; KEGG: tpd:Teth39_0876 L-fuculose phosphate aldolase YP_003994462.1 KEGG: mfl:Mfl298 ATP/GTP binding protein YP_003994463.1 KEGG: hor:Hore_22860 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II YP_003994464.1 KEGG: cdl:CDR20291_0024 transcriptional regulator; manually curated; PFAM: sugar-binding domain-containing protein YP_003994465.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: jan:Jann_2406 periplasmic binding protein/LacI transcriptional regulator YP_003994466.1 KEGG: tte:TTE0763 ABC-type sugar (aldose) transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994467.1 PFAM: inner-membrane translocator; KEGG: jan:Jann_2404 inner-membrane translocator YP_003994468.1 KEGG: pmo:Pmob_1207 tryptophan synthase, alpha subunit; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: thiazole biosynthesis family protein YP_003994469.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: hor:Hore_19510 xylulokinase YP_003994470.1 KEGG: cce:Ccel_0694 hypothetical protein YP_003994471.1 TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; KEGG: amt:Amet_3246 magnesium transporter; SMART: CBS domain containing protein YP_003994472.1 KEGG: cel:B0365.1 hypothetical protein YP_003994473.1 KEGG: htu:Htur_3984 aldo/keto reductase; PFAM: aldo/keto reductase YP_003994474.1 KEGG: ppa:PAS_chr2-1_0331 Mitotic spindle midzone localized microtubule-associated protein (MAP) family member YP_003994475.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mab:MAB_4865 pyridine nucleotide-disulphide oxidoreductase YP_003994476.1 KEGG: str:Sterm_3716 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003994477.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cbt:CLH_1935 1,3-propanediol dehydrogenase YP_003994478.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: ppp:PHYPADRAFT_104124 hypothetical protein YP_003994479.1 KEGG: hor:Hore_03270 ribose-5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase YP_003994480.1 KEGG: hor:Hore_03280 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_003994481.1 KEGG: hor:Hore_14410 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region YP_003994482.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: kpu:KP1_1112 transcriptional antiterminator of glycerol uptake operon YP_003994483.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpu:KP1_1110 3-oxoacyl-(acyl-carrier protein) reductase YP_003994484.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: trq:TRQ2_0653 carbohydrate kinase FGGY YP_003994485.1 TIGRFAM: ketose-bisphosphate aldolase; KEGG: cno:NT01CX_0290 tagatose bisphosphate family class II aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003994486.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ate:Athe_0699 alcohol dehydrogenase zinc-binding domain protein YP_003994487.1 KEGG: hor:Hore_03230 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003994488.1 KEGG: cbt:CLH_2709 glycerol-1-phosphate dehydrogenase; PFAM: 3-dehydroquinate synthase YP_003994489.1 KEGG: fnu:FN1255 NagD protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003994490.1 KEGG: asu:Asuc_1586 glycerone kinase; PFAM: Dak kinase YP_003994491.1 PFAM: sulfatase; KEGG: eat:EAT1b_1580 sulfatase YP_003994492.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: psb:Psyr_3242 glycerophosphodiester phosphodiesterase YP_003994493.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: tmt:Tmath_0350 iron-containing alcohol dehydrogenase YP_003994494.1 PFAM: cation antiporter; KEGG: hor:Hore_12120 cation antiporter YP_003994495.1 PFAM: multiple resistance and pH regulation protein F; KEGG: hor:Hore_12110 multiple resistance and pH regulation protein F YP_003994496.1 KEGG: hor:Hore_12100 monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit YP_003994497.1 KEGG: hor:Hore_12090 multicomponent Na+:H+ antiporter subunit B YP_003994498.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: hor:Hore_12080 Na+/H+ antiporter MnhB subunit-related protein YP_003994499.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: hor:Hore_12070 NADH dehydrogenase I subunit K YP_003994500.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: hor:Hore_12060 NADH dehydrogenase I subunit L YP_003994501.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: hor:Hore_12050 NADH dehydrogenase I subunit M YP_003994502.1 KEGG: str:Sterm_0017 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003994503.1 PFAM: aminotransferase class I and II; KEGG: vcj:VCD_002390 aminotransferase AlaT YP_003994504.1 KEGG: hor:Hore_04500 nuclease (SNase domain protein); PFAM: nuclease (SNase domain-containing protein); nucleic acid binding OB-fold tRNA/helicase-type; SMART: nuclease (SNase domain-containing protein) YP_003994505.1 KEGG: amt:Amet_4705 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_003994506.1 PFAM: Domain of unknown function DUF1850; KEGG: brm:Bmur_0798 domain of unknown function DUF1850 YP_003994507.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: amt:Amet_4703 TRAP transporter solute receptor TAXI family protein YP_003994508.1 KEGG: mbn:Mboo_2150 sulphate transporter YP_003994509.1 KEGG: pfh:PFHG_00509 conserved hypothetical protein YP_003994510.1 KEGG: hor:Hore_19330 hypothetical protein YP_003994511.1 PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: hor:Hore_19320 thiamine biosynthesis protein ThiH YP_003994512.1 KEGG: hor:Hore_19160 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003994513.1 KEGG: dsy:DSY1993 hypothetical protein; manually curated; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS YP_003994514.1 PFAM: TrkA-C domain protein; Citrate transporter; KEGG: hje:HacjB3_06400 arsenite transport protein YP_003994515.1 PFAM: Protein of unknown function DUF2089; KEGG: cpf:CPF_0332 hypothetical protein YP_003994516.1 KEGG: hor:Hore_06880 hypothetical protein YP_003994517.1 KEGG: hor:Hore_10030 proton-coupled thiamine transporter YuaJ; TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ YP_003994518.1 KEGG: amt:Amet_1250 ThiW protein; TIGRFAM: thiW protein; PFAM: ThiW family protein YP_003994519.1 KEGG: ttr:Tter_0647 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_003994520.1 KEGG: nmg:Nmag_1811 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003994521.1 KEGG: tjr:TherJR_0726 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase YP_003994522.1 PFAM: Methyltransferase type 11; KEGG: cma:Cmaq_0864 methyltransferase type 11 YP_003994523.1 PFAM: TENA/THI-4 domain-containing protein; KEGG: tsi:TSIB_0466 transcriptional activator YP_003994524.1 KEGG: aoe:Clos_1108 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003994525.1 KEGG: swo:Swol_1757 hypothetical protein YP_003994526.1 KEGG: cby:CLM_3608 sigma-54 dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003994527.1 KEGG: dau:Daud_0279 aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase YP_003994528.1 TIGRFAM: pyruvate formate-lyase; KEGG: clj:CLJU_c11830 pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_003994529.1 PFAM: protein of unknown function DUF336; KEGG: dsa:Desal_2090 protein of unknown function DUF336 YP_003994530.1 TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: dsy:DSY0417 pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM domain protein YP_003994531.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: cpo:COPRO5265_0137 tungsten-containing aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase YP_003994532.1 KEGG: pmo:Pmob_0384 MoaD family protein; TIGRFAM: MoaD family protein; PFAM: thiamineS protein YP_003994533.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: pmo:Pmob_0383 UBA/ThiF-type NAD/FAD binding protein YP_003994534.1 KEGG: ctc:CTC00445 metal dependent hydrolase YP_003994535.1 PFAM: protein of unknown function DUF1028; KEGG: gct:GC56T3_1921 protein of unknown function DUF1028 YP_003994536.1 PFAM: PfkB domain protein; KEGG: afl:Aflv_2784 fructokinase (ribokinase family) YP_003994537.1 TIGRFAM: argininosuccinate synthase; KEGG: hor:Hore_02900 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003994538.1 KEGG: hor:Hore_02920 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_003994539.1 PFAM: peptidase M48 Ste24p; KEGG: aae:aq_972 hypothetical protein YP_003994540.1 PFAM: Cl- channel voltage-gated family protein; KEGG: sto:ST2411 hypothetical protein YP_003994541.1 PFAM: TrkA-N domain protein; KEGG: shc:Shell_1236 TrkA-N domain protein YP_003994542.1 KEGG: amt:Amet_1837 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003994543.1 KEGG: amt:Amet_1715 methyl-accepting chemotaxis sensory transducer YP_003994544.1 KEGG: mvu:Metvu_1435 hypothetical protein YP_003994545.1 PFAM: transposase IS200-family protein; KEGG: bdu:BDU_1120 transposase-like protein YP_003994546.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_003994547.1 PFAM: PfkB domain protein; KEGG: bmq:BMQ_2407 sugar kinase YP_003994548.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: cac:CA_C2918 mannose-6 phospate isomelase; PFAM: mannose-6-phosphate isomerase type I YP_003994549.1 KEGG: tpd:Teth39_1975 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003994550.1 PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: tex:Teth514_0249 hypothetical protein YP_003994551.1 KEGG: tex:Teth514_0250 hypothetical protein YP_003994552.1 KEGG: tte:TTE0319 2-hydroxyglutaryl-CoA dehydratase activator; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_003994553.1 KEGG: cbc:CbuK_0965 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_003994554.1 KEGG: nth:Nther_2059 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003994555.1 KEGG: chy:CHY_0159 hypothetical protein YP_003994556.1 PFAM: regulatory protein TetR; KEGG: hor:Hore_08440 transcriptional regulator, TetR family YP_003994557.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: hor:Hore_08490 cupin 2 conserved barrel domain protein YP_003994558.1 KEGG: dtu:Dtur_0837 outer membrane efflux protein YP_003994559.1 PFAM: outer membrane efflux protein; KEGG: npu:Npun_F6385 outer membrane efflux protein YP_003994560.1 KEGG: nth:Nther_1943 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003994561.1 PFAM: acriflavin resistance protein; KEGG: adg:Adeg_1907 acriflavin resistance protein YP_003994562.1 KEGG: gct:GC56T3_3325 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_003994563.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: hor:Hore_02820 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_003994564.1 TIGRFAM: acetylglutamate kinase; KEGG: hor:Hore_02840 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003994565.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: hor:Hore_02850 acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_003994566.1 PFAM: SEC-C motif domain protein; KEGG: saf:SULAZ_1547 tetratricopeptide repeat domain protein YP_003994567.1 manually curated; KEGG: hor:Hore_08330 predicted membrane protein YP_003994568.1 KEGG: hor:Hore_22520 hypothetical protein YP_003994569.1 KEGG: hor:Hore_22510 hypothetical protein YP_003994570.1 KEGG: pmo:Pmob_0976 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003994571.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sit:TM1040_2507 MscS mechanosensitive ion channel YP_003994572.1 KEGG: hor:Hore_11290 DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein YP_003994573.1 KEGG: hor:Hore_21480 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003994574.1 KEGG: hor:Hore_18210 sucrose-phosphate synthase; PFAM: glycosyl transferase group 1 YP_003994575.1 PFAM: PfkB domain protein; KEGG: hor:Hore_18220 fructokinase YP_003994576.1 TIGRFAM: pullulanase, type I; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: hor:Hore_13880 pullulanase, type I; SMART: alpha amylase catalytic sub domain YP_003994577.1 KEGG: mar:MAE_49330 hypothetical protein YP_003994578.1 KEGG: nth:Nther_2767 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter YP_003994579.1 TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: drm:Dred_1456 glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase YP_003994580.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; KEGG: hor:Hore_06930 1,4-alpha-glucan branching enzyme; SMART: alpha amylase catalytic sub domain YP_003994581.1 SMART: Helix-hairpin-helix DNA-binding class 1; TIGRFAM: glycogen/starch synthase, ADP-glucose type; competence protein ComEA helix-hairpin-helix repeat protein; KEGG: hor:Hore_06940 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; helix-hairpin-helix motif YP_003994582.1 PFAM: L-fucose isomerase-like-like; L-fucose isomerase _2 domain protein; KEGG: tmt:Tmath_0513 L-fucose isomerase-like protein YP_003994583.1 KEGG: mif:Metin_1116 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994584.1 PFAM: SufBD protein; KEGG: abi:Aboo_0898 SufBD protein YP_003994585.1 KEGG: drm:Dred_0437 hypothetical protein YP_003994586.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2358 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_003994587.1 KEGG: drm:Dred_0439 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994588.1 KEGG: cyh:Cyan8802_1005 protein of unknown function DUF470 YP_003994589.1 KEGG: hor:Hore_21030 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003994590.1 KEGG: fre:Franean1_2247 hypothetical protein YP_003994591.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: hor:Hore_15970 Linocin_M18 bacteriocin protein YP_003994592.1 KEGG: hor:Hore_11060 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003994593.1 KEGG: kcr:Kcr_0601 glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein-like YP_003994594.1 KEGG: kcr:Kcr_0602 glycine dehydrogenase subunit 2 YP_003994595.1 PFAM: ATP-NAD/AcoX kinase; KEGG: aco:Amico_1755 ATP-NAD/AcoX kinase YP_003994596.1 KEGG: hor:Hore_05010 radical SAM domain protein YP_003994597.1 KEGG: nth:Nther_0924 hypothetical protein YP_003994598.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: hmo:HM1_1094 udp-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003994599.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: hor:Hore_05280 pyruvate ferredoxin oxidoreductase, alpha subunit YP_003994600.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; KEGG: hor:Hore_05290 pyruvate ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein YP_003994601.1 PFAM: Rubrerythrin; KEGG: dps:DP1864 hypothetical protein YP_003994602.1 KEGG: hor:Hore_18290 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane YP_003994603.1 KEGG: bbe:BBR47_21070 probable serine protease precursor; manually curated; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin YP_003994604.1 KEGG: hor:Hore_19310 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003994605.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: cyb:CYB_1467 phosphonate ABC transporter, ATP-binding protein; SMART: AAA ATPase YP_003994606.1 KEGG: rde:RD1_1055 phosphonate ABC transporter, permease component; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003994607.1 KEGG: cyb:CYB_1469 phosphonate ABC transporter, permease protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003994608.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: cyb:CYB_0011 phosphonate ABC transporter, phosphonate-binding protein YP_003994609.1 PFAM: fumarate lyase; Fumarase C-like; KEGG: mta:Moth_1273 aspartate ammonia-lyase YP_003994610.1 KEGG: cbi:CLJ_0035 transposase, family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003994611.1 KEGG: sat:SYN_01287 hydroxyacylglutathione hydrolase YP_003994612.1 KEGG: ath:AT5G53550 YSL3 (YELLOW STRIPE LIKE 3); oligopeptide transporter YP_003994613.1 KEGG: aco:Amico_0106 electron transport complex, RnfABCDGE type, D subunit; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein YP_003994614.1 KEGG: tjr:TherJR_2343 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003994615.1 PFAM: Domain of unknown function DUF1858; KEGG: aoe:Clos_0147 hypothetical protein YP_003994616.1 PFAM: cobalamin synthesis protein P47K; KEGG: str:Sterm_1977 cobalamin synthesis protein P47K YP_003994617.1 KEGG: lba:Lebu_0271 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994618.1 KEGG: bse:Bsel_2602 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein; Dak phosphatase YP_003994619.1 PFAM: protein of unknown function DUF1295; KEGG: bse:Bsel_2603 protein of unknown function DUF1295 YP_003994620.1 PFAM: glycosyl transferase group 1; KEGG: kol:Kole_1035 glycosyl transferase group 1 YP_003994621.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: pmo:Pmob_0443 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding YP_003994622.1 PFAM: cyclase family protein; KEGG: afl:Aflv_0977 predicted metal-dependent hydrolase YP_003994623.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: hor:Hore_16270 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003994624.1 KEGG: hor:Hore_21950 protein of unknown function (DUF1121) YP_003994625.1 PFAM: glutamine cyclotransferase; KEGG: nhl:Nhal_2482 glutamine cyclotransferase YP_003994626.1 KEGG: gtn:GTNG_0560 tryptophan transport protein YP_003994627.1 KEGG: mac:MA0180 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003994628.1 KEGG: tde:TDE2704 hypothetical protein YP_003994629.1 KEGG: tde:TDE2703 hypothetical protein YP_003994630.1 KEGG: tde:TDE2702 hypothetical protein YP_003994631.1 KEGG: hor:Hore_16150 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003994632.1 KEGG: hor:Hore_16130 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_003994633.1 KEGG: hor:Hore_16120 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003994634.1 KEGG: hor:Hore_16060 hypothetical protein YP_003994635.1 PFAM: ROK family protein; KEGG: hor:Hore_16050 glucokinase YP_003994636.1 KEGG: hor:Hore_16040 HPr kinase; TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain-containing protein YP_003994637.1 PFAM: Protein of unknown function DUF2223; KEGG: hor:Hore_16030 membrane-anchored protein predicted to be involved in regulation of amylopullulanase YP_003994638.1 PFAM: Squalene/phytoene synthase; KEGG: hor:Hore_15920 squalene synthase YP_003994639.1 KEGG: hor:Hore_15880 uncharacterized P-loop ATPase protein UPF0042 YP_003994640.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: hor:Hore_15870 conserved hypothetical protein, CofD-related TIGR01826 YP_003994641.1 PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like; KEGG: hor:Hore_15860 conserved hypothetical protein TIGR00647 YP_003994642.1 PFAM: sugar-binding domain-containing protein; KEGG: hor:Hore_15840 transcriptional regulator, DeoR family YP_003994643.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gct:GC56T3_3077 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003994644.1 KEGG: hor:Hore_15820 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_003994645.1 TIGRFAM: triosephosphate isomerase; KEGG: hor:Hore_15810 triose-phosphate isomerase; PFAM: triosephosphate isomerase YP_003994646.1 TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: hor:Hore_15800 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein YP_003994647.1 TIGRFAM: enolase; KEGG: hor:Hore_15790 enolase; PFAM: Enolase-like YP_003994648.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; KEGG: sat:SYN_00099 two-component response regulator; SMART: metal-dependent phosphohydrolase HD region YP_003994649.1 PFAM: regulatory protein TetR; KEGG: hor:Hore_05020 transcriptional regulator, TetR family YP_003994650.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_003994651.1 KEGG: smb:smi_1719 transcriptional regulator, TetR family YP_003994652.1 PFAM: outer membrane efflux protein; KEGG: hor:Hore_05030 outer membrane efflux protein YP_003994653.1 KEGG: hor:Hore_05040 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003994654.1 PFAM: acriflavin resistance protein; KEGG: hor:Hore_05050 acriflavin resistance protein YP_003994655.1 KEGG: hor:Hore_15770 preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_003994656.1 TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: hor:Hore_15760 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase YP_003994657.1 PFAM: thioesterase superfamily protein; KEGG: hor:Hore_15750 thioesterase superfamily protein YP_003994658.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: hor:Hore_15740 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003994659.1 TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; KEGG: hor:Hore_15730 ribonuclease R; SMART: Cold shock protein YP_003994660.1 KEGG: hor:Hore_15720 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_003994661.1 TIGRFAM: PAS sensor protein; KEGG: mev:Metev_1156 PAS/PAC sensor signal transduction histidine kinase YP_003994662.1 SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region; manually curated; KEGG: swo:Swol_2483 PAS/PAC sensor protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain YP_003994663.1 PFAM: MscS Mechanosensitive ion channel; KEGG: slt:Slit_1240 MscS mechanosensitive ion channel YP_003994664.1 PFAM: protein of unknown function DUF503; KEGG: hor:Hore_15590 hypothetical protein YP_003994665.1 PFAM: Chromate transporter; KEGG: aoe:Clos_2675 chromate transporter YP_003994666.1 PFAM: Chromate transporter; KEGG: pmo:Pmob_1094 chromate transporter YP_003994667.1 KEGG: hor:Hore_05180 hypothetical protein YP_003994668.1 PFAM: ABC-2 type transporter; KEGG: mac:MA4320 hypothetical protein YP_003994669.1 KEGG: pyo:PY04167 mature-parasite-infected erythrocyte surface antigen YP_003994670.1 KEGG: mba:Mbar_A0600 gliding motility protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994671.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: hor:Hore_07420 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein YP_003994672.1 PFAM: cell wall hydrolase/autolysin; KEGG: hor:Hore_15510 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin YP_003994673.1 PFAM: Lipoprotein LpqB, GerMN domain; KEGG: hor:Hore_15500 hypothetical protein YP_003994674.1 TIGRFAM: glutamate racemase; KEGG: ppd:Ppro_1411 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003994675.1 TIGRFAM: ribonuclease PH; KEGG: hor:Hore_15390 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003994676.1 KEGG: hor:Hore_15380 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_003994677.1 PFAM: YibE/F family protein; KEGG: nth:Nther_2866 YibE/F family protein YP_003994678.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: cth:Cthe_0408 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein YP_003994679.1 PFAM: regulatory protein TetR; KEGG: mpd:MCP_2915 TetR family transcriptional regulator YP_003994680.1 KEGG: hor:Hore_14950 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type YP_003994681.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: hor:Hore_14940 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003994682.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: hor:Hore_14930 ATP-dependent Clp protease, ATP-binding subunit ClpX; SMART: AAA ATPase YP_003994683.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: hor:Hore_14910 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein YP_003994684.1 KEGG: hor:Hore_14900 GTP-binding protein HSR1-related; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003994685.1 PFAM: Methyltransferase type 11; KEGG: hor:Hore_14890 methyltransferase type 11 YP_003994686.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; DoxX family protein; KEGG: hor:Hore_14860 NADH dehydrogenase, FAD-containing subunit YP_003994687.1 PFAM: ApbE family lipoprotein; KEGG: hor:Hore_14840 ApbE family lipoprotein YP_003994688.1 PFAM: Polyprenyl synthetase; KEGG: hor:Hore_14830 heptaprenyl diphosphate synthase component II YP_003994689.1 KEGG: kol:Kole_1121 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_003994690.1 KEGG: slp:Slip_1624 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003994691.1 KEGG: tit:Thit_0243 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003994692.1 KEGG: tex:Teth514_0224 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver YP_003994693.1 KEGG: tra:Trad_0665 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_003994694.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: rsp:RSP_0485 TRAP dicarboxylate family transporter DctQ subunit YP_003994695.1 KEGG: tnp:Tnap_0219 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_003994696.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: pjd:Pjdr2_2744 NAD-dependent epimerase/dehydratase YP_003994697.1 PFAM: amino acid-binding ACT domain protein; KEGG: hor:Hore_14440 hypothetical protein YP_003994698.1 PFAM: protein of unknown function DUF711; KEGG: hor:Hore_14430 hypothetical protein YP_003994699.1 PFAM: alpha/beta hydrolase fold; KEGG: ckr:CKR_0469 hypothetical protein YP_003994700.1 KEGG: amt:Amet_3789 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003994701.1 KEGG: gct:GC56T3_1650 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003994702.1 PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_4916 extracellular solute-binding protein YP_003994703.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_9784 sugar ABC transporter YP_003994704.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmo:Pmob_0029 binding-protein-dependent transport systems inner membrane component YP_003994705.1 TIGRFAM: mannonate dehydratase; KEGG: tit:Thit_0184 mannonate dehydratase; PFAM: Mannonate dehydratase YP_003994706.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mta:Moth_0429 mannitol dehydrogenase YP_003994707.1 KEGG: ote:Oter_1386 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_003994708.1 KEGG: hor:Hore_17320 hypothetical protein YP_003994709.1 KEGG: str:Sterm_0920 hypothetical protein YP_003994710.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: amt:Amet_0555 altronate oxidoreductase YP_003994711.1 KEGG: oih:OB0366 hypothetical protein YP_003994712.1 KEGG: pmo:Pmob_0854 glucuronate isomerase; PFAM: Glucuronate isomerase YP_003994713.1 KEGG: bha:BH0490 altronate hydrolase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_003994714.1 PFAM: Auxin Efflux Carrier; KEGG: str:Sterm_1536 auxin efflux carrier YP_003994715.1 PFAM: glycosyl transferase family 2; KEGG: ttj:TTHA0743 glycosyltransferase related protein YP_003994716.1 KEGG: tal:Thal_1492 hypothetical protein YP_003994717.1 KEGG: mes:Meso_2577 hypothetical protein YP_003994718.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: swo:Swol_1699 acetoin operon expression regulatory protein; SMART: AAA ATPase; PAS domain containing protein YP_003994719.1 KEGG: cby:CLM_1871 TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_003994720.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: tex:Teth514_2032 transketolase, central region YP_003994721.1 PFAM: ATP-NAD/AcoX kinase; KEGG: tpd:Teth39_0792 ATP-NAD/AcoX kinase YP_003994722.1 PFAM: Methyltransferase type 11; KEGG: adg:Adeg_1610 methyltransferase type 11 YP_003994723.1 PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; KEGG: zpr:ZPR_3923 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_003994724.1 KEGG: ppd:Ppro_1041 hypothetical protein YP_003994725.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: cbl:CLK_1657 zinc-binding dehydrogenase family oxidoreductase YP_003994726.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: avn:Avin_41710 short-chain dehydrogenase/reductase SDR YP_003994727.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cby:CLM_2446 acetyltransferase, GNAT family YP_003994728.1 PFAM: inositol monophosphatase; KEGG: gsu:GSU0942 inositol-1-monophosphatase YP_003994729.1 KEGG: dps:DP2348 hypothetical protein YP_003994730.1 PFAM: Methyltransferase type 11; KEGG: nth:Nther_2707 methyltransferase type 11 YP_003994731.1 PFAM: major facilitator superfamily MFS_1; KEGG: aoe:Clos_2077 major facilitator transporter YP_003994732.1 PFAM: metallophosphoesterase; KEGG: amt:Amet_3610 5'-nucleotidase domain-containing protein YP_003994733.1 PFAM: 5'-Nucleotidase domain-containing protein; KEGG: cdf:CD2537 membrane-associated 5'-nucleotidase/phosphoesterase YP_003994734.1 KEGG: cbi:CLJ_B3468 sigma-54 dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003994735.1 PFAM: histidine biosynthesis protein; flavoprotein; KEGG: mmb:Mmol_0896 flavoprotein YP_003994736.1 PFAM: dihydropteroate synthase DHPS; KEGG: nhl:Nhal_0006 dihydropteroate synthase DhpS YP_003994737.1 PFAM: protein of unknown function DUF447; KEGG: meh:M301_0952 protein of unknown function DUF447 YP_003994738.1 KEGG: mei:Msip34_1505 beta-ribofuranosylaminobenzene 5'-phosphate synthase family; TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein YP_003994739.1 PFAM: Protein of unknown function DUF2193; KEGG: rci:RRC513 hypothetical protein YP_003994740.1 KEGG: gbe:GbCGDNIH1_0050 methylenetetrahydrofolate dehydrogenase (NADP+); PFAM: Methylene-tetrahydromethanopterin dehydrogenase YP_003994741.1 PFAM: protein of unknown function DUF201; KEGG: meh:M301_1555 protein of unknown function DUF201 YP_003994742.1 PFAM: molydopterin dinucleotide-binding region; KEGG: mka:MK1526 formylmethanofuran dehydrogenase subunit D YP_003994743.1 TIGRFAM: formylmethanofuran dehydrogenase subunit B; KEGG: mka:MK0259 formylmethanofuran dehydrogenase subunit B; PFAM: molybdopterin oxidoreductase YP_003994744.1 KEGG: mfs:MFS40622_0802 formylmethanofuran dehydrogenase subunit A; TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3 YP_003994745.1 TIGRFAM: formylmethanofuran/tetrahydromethanopterin N-formyltransferase; KEGG: mmb:Mmol_0859 formylmethanofuran--tetrahydromethanopterin formyltransferase; PFAM: formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr) YP_003994746.1 TIGRFAM: formylmethanofuran dehydrogenase subunit C; KEGG: mth:MTH918 molybdenum formylmethanofuran dehydrogenase, subunit C; PFAM: glutamate synthase alpha subunit domain protein YP_003994747.1 TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; KEGG: mka:MK0625 N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase; PFAM: Methenyltetrahydromethanopterin cyclohydrolase YP_003994748.1 KEGG: meh:M301_1553 alpha-L-glutamate ligase, RimK family; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp YP_003994749.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: psl:Psta_4265 triphosphoribosyl-dephospho-CoA protein YP_003994750.1 PFAM: protein of unknown function DUF198; KEGG: cwo:Cwoe_5367 protein of unknown function DUF198 YP_003994751.1 PFAM: protein of unknown function DUF556; KEGG: mtp:Mthe_0348 hypothetical protein YP_003994752.1 TIGRFAM: H4MPT-linked C1 transfer pathway protein; KEGG: mfs:MFS40622_1321 H4MPT-linked C1 transfer pathway protein YP_003994753.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: mpd:MCP_0670 amino acid kinase YP_003994754.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: ttr:Tter_2285 ADP-ribosylation/crystallin J1 YP_003994755.1 TIGRFAM: dihydropteroate synthase; KEGG: tye:THEYE_A0627 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003994756.1 KEGG: lsg:lse_0211 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_003994757.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: cth:Cthe_2583 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_003994758.1 PFAM: protein of unknown function DUF201; KEGG: mif:Metin_1143 protein of unknown function DUF201 YP_003994759.1 PFAM: sodium:dicarboxylate symporter; KEGG: nth:Nther_2680 sodium:dicarboxylate symporter YP_003994760.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: tpd:Teth39_0501 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003994761.1 TIGRFAM: homoserine O-succinyltransferase; KEGG: cth:Cthe_1845 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase YP_003994763.1 KEGG: cno:NT01CX_2329 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1 YP_003994764.1 KEGG: dev:DhcVS_199 membrane protein, Hly III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_003994765.1 KEGG: tte:TTE1764 DNA-directed RNA polymerase specialized sigma subunits, sigma54 homologs; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor; sigma-54 factor core-binding region YP_003994766.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saf:SULAZ_1080 dipeptide transport system permease protein DppC YP_003994767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kol:Kole_1510 binding-protein-dependent transport systems inner membrane component YP_003994768.1 KEGG: hor:Hore_15260 helix-turn-helix type 11 domain protein YP_003994769.1 PFAM: macrophage migration inhibitory factor family protein; KEGG: pmo:Pmob_1555 macrophage migration inhibitory factor family protein YP_003994770.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: sti:Sthe_1355 phosphomannomutase YP_003994771.1 KEGG: cac:CA_C0748 nitroreductase family protein YP_003994772.1 PFAM: aldo/keto reductase; KEGG: hor:Hore_07500 aldo/keto reductase YP_003994773.1 KEGG: cac:CA_C0679 lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region YP_003994774.1 PFAM: extracellular solute-binding protein family 1; KEGG: tle:Tlet_0109 extracellular solute-binding protein YP_003994775.1 PFAM: protein of unknown function DUF187; KEGG: kol:Kole_1178 protein of unknown function DUF187 YP_003994776.1 PFAM: YKOF domain-containing protein; KEGG: mta:Moth_2201 hypothetical protein YP_003994777.1 KEGG: mma:MM_1318 hypothetical protein; PFAM: CBS domain containing protein; peptidase M50; SMART: CBS domain containing protein YP_003994778.1 PFAM: Transcription regulator,histidine kinase sensor-like; histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: tjr:TherJR_0614 histidine kinase YP_003994779.1 KEGG: tjr:TherJR_0615 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver YP_003994780.1 PFAM: microcompartments protein; KEGG: tex:Teth514_1955 microcompartments protein YP_003994781.1 PFAM: microcompartments protein; KEGG: tex:Teth514_1954 microcompartments protein YP_003994782.1 KEGG: tjr:TherJR_0618 glycerol dehydratase; PFAM: dehydratase large subunit YP_003994783.1 PFAM: dehydratase medium subunit; KEGG: dal:Dalk_4998 dehydratase medium subunit YP_003994784.1 PFAM: dehydratase small subunit; KEGG: str:Sterm_1033 dehydratase small subunit YP_003994785.1 PFAM: Diol/glycerol dehydratase reactivating factor large subunit; KEGG: tjr:TherJR_0621 diol/glycerol dehydratase reactivating factor large subunit YP_003994786.1 KEGG: lrf:LAR_1631 propanediol dehydratase reactivation protein PduH YP_003994787.1 PFAM: microcompartments protein; KEGG: tex:Teth514_1948 microcompartments protein YP_003994788.1 PFAM: microcompartments protein; KEGG: tjr:TherJR_0624 microcompartments protein YP_003994789.1 TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: tjr:TherJR_0626 ethanolamine utilization protein EutJ family protein YP_003994790.1 PFAM: flavoprotein; KEGG: tex:Teth514_1945 hypothetical protein YP_003994791.1 PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: tex:Teth514_1944 ethanolamine utilization protein EutN/carboxysome structural protein CcmL YP_003994792.1 TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: kol:Kole_0446 ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_003994793.1 PFAM: protein of unknown function DUF336; KEGG: tjr:TherJR_0629 ATP/cobalamin adenosyltransferase YP_003994794.1 PFAM: Aldehyde Dehydrogenase; KEGG: tjr:TherJR_0630 aldehyde dehydrogenase YP_003994795.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; KEGG: ckr:CKR_0767 hypothetical protein YP_003994796.1 PFAM: microcompartments protein; KEGG: ckr:CKR_0770 hypothetical protein YP_003994797.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: csc:Csac_0407 alcohol dehydrogenase YP_003994798.1 KEGG: aoe:Clos_1447 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_003994799.1 PFAM: microcompartments protein; KEGG: ctc:CTC02181 ethanolamine utilization protein EutS YP_003994800.1 TIGRFAM: ethanolamine utilization protein, EutP; KEGG: cpf:CPF_0887 ethanolamine utilization protein, EutP YP_003994801.1 KEGG: pmo:Pmob_0641 methylthioribose kinase YP_003994802.1 PFAM: Propanediol utilization protein; KEGG: ctc:CTC02170 ethanolamine utilization protein YP_003994803.1 PFAM: Protein of unknown function DUF2177, membrane; KEGG: drt:Dret_1193 hypothetical protein YP_003994804.1 KEGG: dvi:Dvir_GJ22873 GJ22873 gene product from transcript GJ22873-RA YP_003994805.1 KEGG: hor:Hore_13300 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein YP_003994806.1 KEGG: mat:MARTH_orf708 oligopeptide ABC transporter permease protein YP_003994807.1 PFAM: protein of unknown function DUF389; KEGG: mtp:Mthe_1240 hypothetical protein YP_003994808.1 KEGG: zpr:ZPR_2531 polyferredoxin-like protein YP_003994809.1 KEGG: bse:Bsel_2790 uncharacterized conserved protein UCP020408 YP_003994810.1 PFAM: Radical SAM domain protein; KEGG: gtn:GTNG_3219 arylsulfatase regulator Fe-S oxidoreductase YP_003994811.1 KEGG: hmg:100199384 similar to heat shock 70kD protein binding protein YP_003994812.1 PFAM: polysaccharide deacetylase; KEGG: nth:Nther_2064 polysaccharide deacetylase YP_003994813.1 PFAM: protein of unknown function DUF89; KEGG: hor:Hore_21010 hypothetical protein YP_003994814.1 PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: hor:Hore_15360 methionine synthase YP_003994815.1 KEGG: hor:Hore_15370 helix-turn-helix-domain containing protein AraC type; PFAM: helix-turn-helix- domain containing protein AraC type; Transcription regulator,histidine kinase sensor-like; SMART: Helix-turn-helix, AraC domain YP_003994816.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: cdf:CD3065 xylulose kinase YP_003994817.1 KEGG: dhd:Dhaf_2640 uroporphyrinogen-III decarboxylase-like protein YP_003994818.1 KEGG: dhd:Dhaf_3800 hypothetical protein YP_003994819.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: hor:Hore_15330 methylamine-specific methylcobalamin coenzyme M methyltransferase YP_003994820.1 PFAM: cobalamin synthesis protein P47K; KEGG: hor:Hore_15320 cobalamin synthesis protein P47K YP_003994821.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: aoe:Clos_0736 integrase catalytic region YP_003994822.1 PFAM: regulatory protein TetR; KEGG: gur:Gura_1655 TetR family transcriptional regulator YP_003994823.1 PFAM: protein of unknown function UPF0118; KEGG: bse:Bsel_1511 protein of unknown function UPF0118 YP_003994824.1 KEGG: pkn:PKH_021370 NMD3 homologue YP_003994825.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_003994826.1 PFAM: Integrase catalytic region; KEGG: drm:Dred_0300 transposase YP_003994827.1 KEGG: drm:Dred_0299 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_003994828.1 KEGG: nde:NIDE3990 hypothetical protein YP_003994829.1 KEGG: cba:CLB_2468 hypothetical protein YP_003994830.1 KEGG: mae:Maeo_0562 S-layer protein YP_003994831.1 KEGG: bmq:BMQ_pBM50014 hypothetical protein YP_003994832.1 KEGG: sru:SRU_0755 hypothetical protein YP_003994833.1 PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911 YP_003994834.1 KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region YP_003994835.1 KEGG: tcx:Tcr_0336 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2081 YP_003994836.1 KEGG: tet:TTHERM_00735380 hypothetical protein YP_003994837.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: saf:SULAZ_1308 modification methylase, type III R/M system YP_003994838.1 PFAM: type III restriction protein res subunit; KEGG: dtu:Dtur_1297 type III restriction protein res subunit YP_003994839.1 PFAM: UvrD/REP helicase; KEGG: afl:Aflv_1173 superfamily I helicase domain and RecB family exonuclease domain YP_003994840.1 KEGG: pyo:PY01185 235 kDa rhoptry protein YP_003994841.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_003994842.1 KEGG: bvi:Bcep1808_2093 hypothetical protein YP_003994843.1 KEGG: sse:Ssed_2458 hypothetical protein YP_003994844.1 KEGG: syg:sync_1511 hypothetical protein YP_003994845.1 KEGG: nth:Nther_0250 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003994846.1 KEGG: nth:Nther_0251 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003994847.1 KEGG: nth:Nther_0252 response regulator receiver protein; PFAM: response regulator receiver; Tetratricopeptide TPR_1 repeat-containing protein; SMART: response regulator receiver; Tetratricopeptide repeat YP_003994848.1 PFAM: TrkA-N domain protein; KEGG: tle:Tlet_0894 TrkA domain-containing protein YP_003994849.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: hor:Hore_11630 TrkA-C domain protein YP_003994850.1 PFAM: cation transporter; KEGG: nth:Nther_0255 cation transporter YP_003994851.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mhu:Mhun_0801 protein of unknown function DUF395, YeeE/YedE YP_003994852.1 KEGG: gsu:GSU2311 YeeE/YedE family protein YP_003994853.1 PFAM: TrkA-C domain protein; Citrate transporter; KEGG: bse:Bsel_2844 TrkA-C domain protein YP_003994854.1 KEGG: tjr:TherJR_1205 single-stranded-DNA-specific exonuclease RecJ YP_003994855.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; response regulator receiver; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: kol:Kole_0452 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_003994856.1 KEGG: rba:RB10344 hypothetical protein YP_003994857.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: nth:Nther_0783 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_003994858.1 KEGG: hje:HacjB3_04500 circadian clock protein, KaiC; SMART: AAA ATPase YP_003994859.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: swo:Swol_2483 PAS/PAC sensor protein; SMART: GGDEF domain containing protein; PAS domain containing protein; metal-dependent phosphohydrolase HD region YP_003994860.1 KEGG: sti:Sthe_1838 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein YP_003994861.1 PFAM: glycoside hydrolase family 39; helix-turn-helix- domain containing protein AraC type; KEGG: aoe:Clos_0056 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain YP_003994862.1 PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase YP_003994863.1 PFAM: Integrase catalytic region; KEGG: aoe:Clos_0736 integrase catalytic region YP_003994864.1 KEGG: bhy:BHWA1_02243 beta-D-glucuronidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich YP_003994865.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: sha:SH2654 hypothetical protein YP_003994866.1 KEGG: gsu:GSU2636 alpha-amylase family protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003994867.1 KEGG: hap:HAPS_0149 methionyl-tRNA synthetase YP_003994868.1 KEGG: scb:SCAB_43401 integral membrane protein YP_003994870.1 KEGG: cdu:CD36_42930 hypothetical protein YP_003994871.1 KEGG: adg:Adeg_1273 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003994872.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: nth:Nther_0552 FxsA cytoplasmic membrane protein YP_003994873.1 KEGG: clj:CLJU_c15790 hypothetical protein YP_003994874.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: pjd:Pjdr2_2682 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase YP_003994875.1 PFAM: glutaredoxin; KEGG: hor:Hore_11170 glutaredoxin YP_003994876.1 KEGG: hor:Hore_04840 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003994877.1 KEGG: pmo:Pmob_0433 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003994878.1 KEGG: hor:Hore_22370 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003994879.1 PFAM: Methyltransferase type 11; KEGG: aoe:Clos_0075 methyltransferase type 11 YP_003994880.1 KEGG: pmo:Pmob_0385 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003994881.1 KEGG: hau:Haur_1394 hypothetical protein YP_003994882.1 KEGG: hor:Hore_14590 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_003994883.1 PFAM: sodium/sulphate symporter; KEGG: lpj:JDM1_2359 transport protein YP_003994884.1 KEGG: pmo:Pmob_0375 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_003994885.1 KEGG: pmo:Pmob_0374 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_003994886.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; KEGG: pmo:Pmob_0373 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_003994887.1 KEGG: pmo:Pmob_0372 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC YP_003994888.1 KEGG: dau:Daud_1891 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_003994889.1 PFAM: MOSC domain containing protein; KEGG: tpd:Teth39_0863 MOSC domain-containing protein YP_003994890.1 KEGG: pmo:Pmob_0376 hypothetical protein YP_003994891.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: hor:Hore_10260 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_003994892.1 KEGG: hor:Hore_10280 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_003994893.1 KEGG: hor:Hore_10310 beta-ketoacyl synthase; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_003994894.1 KEGG: csc:Csac_2197 hypothetical protein YP_003994895.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: hor:Hore_14560 kojibiose phosphorylase YP_003994896.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hor:Hore_14500 membrane protein YP_003994897.1 KEGG: hor:Hore_14410 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region YP_003994898.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: hor:Hore_14380 acid phosphatase/vanadium-dependent haloperoxidase related YP_003994899.1 TIGRFAM: FolC bifunctional protein; KEGG: hor:Hore_14370 folylpolyglutamate synthase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_003994900.1 PFAM: Sporulation domain-containing protein; KEGG: hor:Hore_14360 sporulation domain protein YP_003994901.1 KEGG: hor:Hore_14350 electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain YP_003994902.1 KEGG: hor:Hore_14340 electron transport complex, RnfABCDGE type, D subunit; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein YP_003994903.1 KEGG: hor:Hore_14330 electron transport complex, RnfABCDGE type, G subunit; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein YP_003994904.1 KEGG: hor:Hore_14320 electron transport complex, RnfABCDGE type, E subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit YP_003994905.1 KEGG: hor:Hore_14310 electron transport complex, RnfABCDGE type, A subunit; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit YP_003994906.1 KEGG: hor:Hore_14300 electron transport complex, RnfABCDGE type, B subunit; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein YP_003994907.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: cac:CA_C3514 reverse transcriptase/maturase family protein YP_003994908.1 PFAM: protein of unknown function DUF1312; KEGG: hor:Hore_14290 hypothetical protein YP_003994909.1 PFAM: Heptaprenyl diphosphate synthase component I; KEGG: hor:Hore_14270 heptaprenyl diphosphate synthase component I YP_003994910.1 KEGG: hor:Hore_14260 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_003994911.1 KEGG: hor:Hore_14250 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_003994912.1 KEGG: hor:Hore_14240 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_003994913.1 KEGG: hor:Hore_14230 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_003994914.1 TIGRFAM: rod shape-determining protein MreD; KEGG: hor:Hore_14220 hypothetical protein YP_003994915.1 TIGRFAM: penicillin-binding protein 2; KEGG: hor:Hore_14210 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003994916.1 KEGG: hor:Hore_14200 septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC YP_003994917.1 TIGRFAM: septum site-determining protein MinD; KEGG: hor:Hore_14190 septum site-determining protein MinD YP_003994918.1 manually curated; TIGRFAM: cell division topological specificity factor MinE; KEGG: hor:Hore_14180 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE YP_003994919.1 KEGG: hor:Hore_14170 cell cycle protein; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_003994920.1 KEGG: hor:Hore_14150 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003994921.1 PFAM: Protein of unknown function DUF2344; KEGG: hor:Hore_14140 hypothetical protein YP_003994922.1 manually curated; TIGRFAM: ribonuclease, Rne/Rng family; KEGG: hor:Hore_14130 ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; deoxyribonuclease/rho motif-related TRAM YP_003994923.1 KEGG: hor:Hore_14120 ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_003994924.1 KEGG: hor:Hore_14110 ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_003994925.1 KEGG: hor:Hore_14100 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein YP_003994926.1 PFAM: protein of unknown function UPF0044; KEGG: hor:Hore_14090 conserved hypothetical protein TIGR00253 YP_003994927.1 KEGG: hor:Hore_14080 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003994928.1 KEGG: hor:Hore_14070 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003994929.1 PFAM: nitrogen regulatory protein P-II; KEGG: pmx:PERMA_2025 nitrogen regulatory protein P-II YP_003994930.1 KEGG: pmo:Pmob_1796 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003994931.1 TIGRFAM: NAD+ synthetase; KEGG: hor:Hore_19030 NH(3)-dependent NAD(+) synthetase YP_003994932.1 TIGRFAM: glutamine synthetase, type I; KEGG: hor:Hore_21290 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003994933.1 KEGG: hor:Hore_10830 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_003994934.1 PFAM: sulfatase; KEGG: tjr:TherJR_2850 sulfatase YP_003994935.1 KEGG: ngr:NAEGRDRAFT_47787 hypothetical protein YP_003994936.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: hor:Hore_08530 diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_003994937.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: hor:Hore_10000 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein YP_003994938.1 KEGG: hor:Hore_10010 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_003994939.1 KEGG: hor:Hore_10020 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003994940.1 KEGG: tnp:Tnap_1382 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like YP_003994941.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tmt:Tmath_1780 FAD dependent oxidoreductase YP_003994942.1 TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase; KEGG: dsa:Desal_0965 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Methionine sulfoxide reductase A YP_003994943.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: amt:Amet_3313 Na+/H+ antiporter NhaC YP_003994944.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase; KEGG: cbe:Cbei_0228 phosphomannomutase YP_003994945.1 PFAM: aldo/keto reductase; KEGG: emi:Emin_1283 aldo/keto reductase YP_003994946.1 PFAM: Sporulation protein YtfJ; KEGG: cce:Ccel_0378 hypothetical protein YP_003994947.1 KEGG: amt:Amet_2929 hypothetical protein YP_003994948.1 TIGRFAM: threonine synthase; KEGG: tjr:TherJR_0934 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003994949.1 KEGG: kko:Kkor_0171 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_003994950.1 PFAM: protein of unknown function DUF82; KEGG: cyh:Cyan8802_3080 protein of unknown function DUF82 YP_003994951.1 PFAM: Integrase catalytic region; KEGG: cpr:CPR_0383 IS1470, transposase YP_003994952.1 PFAM: Citrate transporter; KEGG: maq:Maqu_1802 anion transporter YP_003994953.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_3065 GCN5-related N-acetyltransferase YP_003994954.1 KEGG: cno:NT01CX_1512 fructose-1,6-bisphosphatase; PFAM: fructose-16-bisphosphatase YP_003994955.1 KEGG: amt:Amet_4270 transcriptional antiterminator, BglG; PFAM: PRD domain protein; M trans-acting positive regulator YP_003994956.1 KEGG: amt:Amet_4269 PTS system, mannitol-specific IIC subunit; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system lactose/cellobiose-specific IIB subunit; phosphotransferase system EIIC YP_003994957.1 KEGG: amt:Amet_4268 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_003994958.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: amt:Amet_4267 alcohol dehydrogenase YP_003994959.1 KEGG: amt:Amet_0569 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003994960.1 KEGG: mtp:Mthe_1602 Cna B domain-containing protein YP_003994961.1 KEGG: vex:VEA_000062 hypothetical protein YP_003994962.1 KEGG: cpu:cpfrc_01202 hypothetical protein YP_003994963.1 KEGG: rmr:Rmar_2547 Appr-1-p processing domain protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_003994964.1 KEGG: fps:FP0324 outer membrane protein precursor YP_003994965.1 PFAM: cyclase family protein; KEGG: hor:Hore_13480 cyclase family protein YP_003994966.1 PFAM: protein of unknown function DUF1385; KEGG: fno:Fnod_0441 hypothetical protein YP_003994967.1 KEGG: tye:THEYE_A0195 hypothetical protein YP_003994968.1 KEGG: drm:Dred_3056 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003994969.1 KEGG: nth:Nther_1852 D-aminoacylase domain protein; PFAM: D-aminoacylase domain protein; amidohydrolase YP_003994970.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: nth:Nther_2668 C4-dicarboxylate anaerobic carrier YP_003994971.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: bbe:BBR47_13780 probable NAD-dependent malic enzyme YP_003994972.1 KEGG: cbt:CLH_1413 hypothetical protein YP_003994973.1 PFAM: RelA/SpoT domain protein; KEGG: cce:Ccel_1831 RelA/SpoT domain protein YP_003994974.1 KEGG: hha:Hhal_0348 TonB-like protein YP_003994975.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: hor:Hore_08020 homoserine dehydrogenase YP_003994976.1 KEGG: mac:MA2763 hypothetical protein YP_003994977.1 KEGG: hor:Hore_02610 hypothetical protein YP_003994978.1 PFAM: SNARE associated Golgi protein; KEGG: amt:Amet_1273 SNARE associated Golgi protein YP_003994979.1 PFAM: acyltransferase 3; KEGG: pca:Pcar_0523 acyltransferase family protein YP_003994980.1 KEGG: slo:Shew_3805 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003994981.1 KEGG: hor:Hore_11330 glutamate--cysteine ligase/ amino acid ligase YP_003994982.1 KEGG: cdl:CDR20291_1317 iron-sulfur protein YP_003994983.1 PFAM: purine or other phosphorylase family 1; KEGG: tmt:Tmath_1426 purine or other phosphorylase family 1 YP_003994984.1 PFAM: Citrate synthase; KEGG: cno:NT01CX_0234 citrate synthase YP_003994985.1 KEGG: sat:SYN_00512 hypothetical protein YP_003994986.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rmu:RMDY18_03750 dehydrogenase YP_003994987.1 KEGG: smf:Smon_1289 bleomycin hydrolase; PFAM: peptidase C1B bleomycin hydrolase YP_003994988.1 KEGG: cbi:CLJ_B0704 CsaA protein; TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain-containing protein YP_003994989.1 KEGG: lpc:LPC_2650 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_003994990.1 KEGG: nth:Nther_0749 hypothetical protein YP_003994991.1 KEGG: cba:CLB_3368 pyruvate carboxylase; TIGRFAM: pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxyltransferase; Conserved carboxylase region; biotin/lipoyl attachment domain-containing protein YP_003994992.1 KEGG: mfs:MFS40622_0758 protein of unknown function UPF0132 YP_003994993.1 KEGG: cpr:CPR_0894 hypothetical protein YP_003994994.1 PFAM: metallophosphoesterase; KEGG: hor:Hore_06370 metallophosphoesterase YP_003994995.1 KEGG: hor:Hore_06380 hypothetical protein YP_003994996.1 KEGG: hor:Hore_13250 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_003994997.1 KEGG: cpo:COPRO5265_0839 ribose/xylose/arabinose/galactoside ABC-type transport system, permease component YP_003994998.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: cpr:CPR_1519 phosphoribosylpyrophosphate synthetase; PFAM: phosphoribosyltransferase YP_003994999.1 KEGG: hor:Hore_15640 predicted ATPase (AAA+ superfamily); PFAM: protein of unknown function DUF815; SMART: AAA ATPase YP_003995000.1 KEGG: hor:Hore_05480 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003995001.1 KEGG: pmo:Pmob_1813 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region YP_003995002.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dhd:Dhaf_4876 diaminopimelate decarboxylase YP_003995003.1 KEGG: pmo:Pmob_1224 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003995004.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: tna:CTN_0973 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003995005.1 KEGG: pmo:Pmob_1222 tetrahydrodipicolinate succinyltransferase domain-containing protein; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; PFAM: Tetrahydrodipicolinate succinyltransferase domain-containing protein; transferase hexapeptide repeat containing protein YP_003995006.1 PFAM: aminotransferase class-III; KEGG: pmo:Pmob_1220 aminotransferase class-III YP_003995007.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: hor:Hore_11080 phage integrase family protein YP_003995008.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: dak:DaAHT2_0063 ATP-dependent chaperone ClpB; SMART: AAA ATPase YP_003995009.1 KEGG: cnb:CNBG0440 hypothetical protein YP_003995010.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spo:SPAC1952.08c pyridoxamine 5'-phosphate oxidase (predicted) YP_003995011.1 KEGG: hor:Hore_00210 death-on-curing family protein; TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic YP_003995012.1 KEGG: hor:Hore_00220 transcriptional regulator/antitoxin, MazE; TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain-containing protein YP_003995013.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: afl:Aflv_2662 transcription regulator containing filamentation induced by cAMP family (Fic) domain and ArsR subfamily HTH domain YP_003995014.1 PFAM: Methyltransferase type 11; KEGG: cyt:cce_3443 hypothetical protein YP_003995015.1 PFAM: Methyltransferase type 12; KEGG: cdl:CDR20291_3071 hypothetical protein YP_003995016.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cts:Ctha_2428 NmrA family protein YP_003995017.1 PFAM: Abortive infection protein; KEGG: nth:Nther_1501 abortive infection protein YP_003995018.1 KEGG: cbi:CLJ_0035 transposase, family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003995019.1 KEGG: btb:BMB171_C1972 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_003995020.1 KEGG: bpf:BpOF4_09095 flavoprotein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase YP_003995021.1 KEGG: hor:Hore_11310 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003995022.1 manually curated; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: hor:Hore_04070 transcriptional regulator, GntR family; SMART: regulatory protein GntR HTH YP_003995023.1 PFAM: Chromate transporter; KEGG: hor:Hore_04080 chromate transporter YP_003995024.1 PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase YP_003995025.1 PFAM: Integrase catalytic region; KEGG: aoe:Clos_0736 integrase catalytic region YP_003995026.1 PFAM: Chromate transporter; KEGG: hor:Hore_04090 chromate transporter YP_003995027.1 KEGG: hor:Hore_11280 flavoredoxin YP_003995028.1 PFAM: Resolvase domain; KEGG: hor:Hore_11450 resolvase domain protein YP_003995029.1 KEGG: hor:Hore_11460 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003995030.1 KEGG: hor:Hore_11470 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region YP_003995031.1 KEGG: hor:Hore_11480 uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily YP_003995032.1 KEGG: hor:Hore_11550 tetratricopeptide TPR_2 repeat protein YP_003995033.1 KEGG: hor:Hore_11580 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003995034.1 PFAM: Thioredoxin domain-containing protein; KEGG: hor:Hore_15070 thioredoxin domain protein YP_003995035.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: hor:Hore_11650 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003995036.1 KEGG: hor:Hore_11660 DNA mismatch repair protein MutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_003995037.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: hor:Hore_11670 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_003995038.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: hor:Hore_11680 RNA modification enzyme, MiaB family; SMART: Elongator protein 3/MiaB/NifB YP_003995039.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: hor:Hore_11690 TrkA-N domain protein YP_003995040.1 TIGRFAM: potassium uptake protein, TrkH family; KEGG: hor:Hore_11710 potassium uptake protein, TrkH family; PFAM: cation transporter YP_003995041.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tpd:Teth39_0497 rubredoxin-type Fe(Cys)4 protein YP_003995042.1 KEGG: dde:Dde_0310 CBS; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; CBS domain containing protein YP_003995043.1 PFAM: Integrase catalytic region; KEGG: tit:Thit_2281 integrase catalytic region YP_003995044.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: hor:Hore_11740 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein YP_003995045.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: hor:Hore_11750 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003995046.1 PFAM: cell wall hydrolase SleB; KEGG: hor:Hore_11760 cell wall hydrolase SleB YP_003995047.1 PFAM: S-layer domain-containing protein; KEGG: hor:Hore_11770 S-layer domain protein YP_003995048.1 KEGG: hor:Hore_11780 hypothetical protein YP_003995049.1 TIGRFAM: TonB family protein; KEGG: hor:Hore_11790 TonB family protein YP_003995050.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hor:Hore_11800 biopolymer transport protein ExbD/TolR YP_003995051.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: hor:Hore_11810 MotA/TolQ/ExbB proton channel YP_003995052.1 KEGG: hor:Hore_13290 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003995053.1 KEGG: hor:Hore_13280 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_003995054.1 PFAM: Stage V sporulation protein S; KEGG: hor:Hore_11860 stage V sporulation protein S YP_003995055.1 PFAM: metallophosphoesterase; KEGG: pmx:PERMA_0122 hypothetical protein YP_003995056.1 TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; KEGG: hor:Hore_11870 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_003995057.1 PFAM: regulatory protein RecX; KEGG: hor:Hore_11880 regulatory protein RecX YP_003995058.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: hor:Hore_11890 RecA protein; SMART: AAA ATPase YP_003995059.1 KEGG: hor:Hore_11900 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX YP_003995060.1 KEGG: hor:Hore_11910 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; Tetratricopeptide TPR_3 repeat-containing protein; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein YP_003995061.1 KEGG: bwe:BcerKBAB4_3551 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein YP_003995062.1 PFAM: phosphatidylglycerophosphatase A; KEGG: hor:Hore_11950 phosphatidylglycerophosphatase YP_003995063.1 KEGG: hor:Hore_11960 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003995064.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: hor:Hore_11970 MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB YP_003995065.1 KEGG: hor:Hore_11980 hypothetical protein YP_003995066.1 KEGG: mpd:MCP_2479 DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein YP_003995067.1 KEGG: mpd:MCP_2478 DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein YP_003995068.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cyc:PCC7424_4940 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003995069.1 KEGG: ctc:CTC01998 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_003995070.1 KEGG: sus:Acid_1937 hypothetical protein YP_003995071.1 PFAM: rRNA methylase; KEGG: hor:Hore_12000 rRNA methylase YP_003995072.1 KEGG: hor:Hore_08830 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_003995073.1 KEGG: hor:Hore_08820 helix-turn-helix YP_003995074.1 PFAM: inner-membrane translocator; KEGG: nth:Nther_0423 inner-membrane translocator YP_003995075.1 PFAM: inner-membrane translocator; KEGG: nth:Nther_0422 inner-membrane translocator YP_003995076.1 KEGG: nth:Nther_0421 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995077.1 PFAM: basic membrane lipoprotein; KEGG: nth:Nther_0420 basic membrane lipoprotein YP_003995078.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: hor:Hore_08760 cell divisionFtsK/SpoIIIE YP_003995079.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: hor:Hore_08700 beta-lactamase domain protein YP_003995080.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: hor:Hore_08670 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_003995081.1 KEGG: hor:Hore_08620 predicted permease, DMT superfamily; manually curated; PFAM: protein of unknown function DUF6 transmembrane YP_003995082.1 KEGG: hor:Hore_08600 RNA methylase; PFAM: RNA methylase; THUMP domain-containing protein YP_003995083.1 KEGG: wch:wcw_0538 pyrazinamidase/nicotinamidase; PFAM: isochorismatase hydrolase YP_003995084.1 PFAM: acylphosphatase; KEGG: hor:Hore_08420 cylphosphatase YP_003995085.1 KEGG: sfu:Sfum_3218 glutaredoxin; TIGRFAM: glutaredoxin 3; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin YP_003995086.1 KEGG: hor:Hore_15270 hypothetical protein YP_003995087.1 PFAM: HI0933 family protein; KEGG: cno:NT01CX_2094 NAD(FAD)-utilizing dehydrogenase YP_003995088.1 PFAM: aminotransferase class I and II; KEGG: cth:Cthe_2800 aminotransferase, class I and II YP_003995089.1 KEGG: cpi:Cpin_3420 cyclic peptide transporter YP_003995090.1 KEGG: hor:Hore_08190 Xaa-His dipeptidase; TIGRFAM: dipeptidase; PFAM: peptidase M20 YP_003995091.1 KEGG: pmo:Pmob_0119 carboxylesterase YP_003995092.1 KEGG: hor:Hore_08170 oligoendopeptidase F; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F YP_003995093.1 KEGG: hor:Hore_08160 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_003995094.1 KEGG: hor:Hore_08140 asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_003995095.1 PFAM: Desulfoferrodoxin Dfx domain protein; KEGG: mac:MA4664 hypothetical protein YP_003995096.1 KEGG: hor:Hore_08040 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003995097.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: pmo:Pmob_1153 homoserine dehydrogenase YP_003995098.1 KEGG: hor:Hore_08010 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase domain protein; GHMP kinase YP_003995099.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: hor:Hore_18480 translation initiation factor, aIF-2BI family; PFAM: initiation factor 2B related YP_003995100.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: hor:Hore_07970 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_003995101.1 KEGG: hor:Hore_07930 cell wall hydrolase SleB; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003995102.1 KEGG: hor:Hore_07920 helicase C2; PFAM: DNA repair protein RadC; SMART: helicase c2; DEAD-like helicase YP_003995103.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: hor:Hore_07910 apurinic endonuclease Apn1; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_003995104.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: hor:Hore_07900 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_003995105.1 KEGG: hor:Hore_07890 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_003995106.1 KEGG: hor:Hore_07880 FMN adenylyltransferase;riboflavin kinase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase YP_003995107.1 KEGG: hor:Hore_07870 tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_003995108.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: hor:Hore_07860 phosphoesterase RecJ domain protein YP_003995109.1 KEGG: hor:Hore_07850 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_003995110.1 KEGG: hor:Hore_07840 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein YP_003995111.1 PFAM: protein of unknown function DUF448; KEGG: hor:Hore_07830 predicted nucleic-acid-binding protein implicated in transcription termination YP_003995112.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; KEGG: hor:Hore_07820 NusA antitermination factor; SMART: KH domain protein YP_003995113.1 PFAM: protein of unknown function DUF150; KEGG: hor:Hore_07810 hypothetical protein YP_003995114.1 SMART: Exonuclease; phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; KEGG: hor:Hore_07800 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_003995115.1 KEGG: hor:Hore_07770 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_003995116.1 KEGG: hor:Hore_07760 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_003995117.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: hor:Hore_07740 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein YP_003995118.1 KEGG: hor:Hore_07720 sporulation integral membrane protein YtvI; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118 YP_003995119.1 PFAM: phosphatidate cytidylyltransferase; KEGG: hor:Hore_07710 phosphatidate cytidylyltransferase YP_003995120.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: hor:Hore_07700 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003995121.1 KEGG: tad:TRIADDRAFT_53983 hypothetical protein YP_003995122.1 KEGG: hor:Hore_07680 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_003995123.1 KEGG: hor:Hore_07670 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003995124.1 KEGG: hor:Hore_07660 translation elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_003995125.1 KEGG: hor:Hore_07650 ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_003995126.1 KEGG: hor:Hore_07580 transcriptional repressor CodY; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: GTP-sensing transcriptional pleiotropic repressor CodY; Helix-turn-helix CodY domain protein YP_003995127.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: hor:Hore_07570 heat shock protein HslVU, ATPase subunit HslU; SMART: AAA ATPase YP_003995128.1 PFAM: 20S proteasome A and B subunits; KEGG: hor:Hore_07560 ATP-dependent protease peptidase subunit YP_003995129.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: hor:Hore_07540 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein YP_003995130.1 PFAM: protein of unknown function DUF494; KEGG: hor:Hore_07530 hypothetical protein YP_003995131.1 KEGG: hor:Hore_07520 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_003995132.1 PFAM: cation transporter; KEGG: amt:Amet_4415 TrkH family potassium uptake protein YP_003995133.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: scl:sce7466 TrkA family potassium uptake protein YP_003995134.1 PFAM: protein of unknown function DUF541; KEGG: gau:GAU_0029 hypothetical protein YP_003995135.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dap:Dacet_0828 biopolymer transport protein ExbD/TolR YP_003995136.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein YP_003995137.1 KEGG: mmu:100039272 predicted gene 2129; TIGRFAM: TonB family protein; PFAM: TonB domain YP_003995138.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pwa:Pecwa_0558 TonB-dependent receptor YP_003995139.1 PFAM: Uncharacterised protein family UPF0102; KEGG: pmx:PERMA_0362 hypothetical protein YP_003995140.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: tmt:Tmath_1299 Mg chelatase, subunit ChlI; SMART: AAA ATPase YP_003995141.1 PFAM: protein of unknown function DUF988; KEGG: hor:Hore_07380 predicted membrane protein YP_003995142.1 KEGG: hor:Hore_07370 ribonuclease H; PFAM: ribonuclease HII/HIII YP_003995143.1 KEGG: hor:Hore_07360 GTP-binding protein HSR1-related; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related YP_003995144.1 KEGG: hor:Hore_07350 ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_003995145.1 PFAM: Protein of unknown function DUF2168; KEGG: hor:Hore_07340 hypothetical protein YP_003995146.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: hor:Hore_07330 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003995147.1 KEGG: hor:Hore_07320 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_003995148.1 KEGG: hor:Hore_07310 nucleic acid binding protein, containing KH domain YP_003995149.1 KEGG: hor:Hore_07300 ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_003995150.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: hor:Hore_07290 signal recognition particle protein; SMART: AAA ATPase YP_003995151.1 PFAM: helix-turn-helix protein YlxM/p13 family protein; KEGG: hor:Hore_07280 helix-turn-helix protein YlxM/p13 family protein YP_003995152.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: hor:Hore_07270 signal recognition particle-docking protein FtsY; SMART: AAA ATPase YP_003995153.1 KEGG: hor:Hore_07250 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain-containing protein YP_003995154.1 PFAM: Stage V sporulation protein S; KEGG: hor:Hore_07240 stage V sporulation protein S YP_003995155.1 KEGG: hor:Hore_07230 ribosomal large subunit pseudouridine synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003995156.1 KEGG: hor:Hore_07180 transcriptional regulator; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_003995157.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: hor:Hore_07170 chromosome segregation and condensation protein ScpA YP_003995158.1 PFAM: peptidase M50; KEGG: hor:Hore_07160 peptidase M50 YP_003995159.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: hor:Hore_07150 CBS domain containing protein YP_003995160.1 PFAM: Quinolinate phosphoribosyl transferase; KEGG: hor:Hore_06990 nicotinic acid phosphoribosyltransferase YP_003995161.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: hor:Hore_06970 thymidine phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain YP_003995162.1 KEGG: hor:Hore_06960 purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1 YP_003995163.1 PFAM: peptidase M29 aminopeptidase II; KEGG: hor:Hore_06890 aminopeptidase protein YP_003995164.1 KEGG: hor:Hore_06840 conserved hypothetical protein TIGR00375 YP_003995165.1 PFAM: NUDIX hydrolase; KEGG: tpd:Teth39_1115 NUDIX hydrolase YP_003995166.1 KEGG: hor:Hore_06590 response regulator receiver protein; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver YP_003995167.1 KEGG: hor:Hore_06570 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_003995168.1 PFAM: ATP-NAD/AcoX kinase; KEGG: hor:Hore_06550 ATP-NAD/AcoX kinase YP_003995169.1 TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: hor:Hore_06540 hemolysin A; SMART: RNA-binding S4 domain protein YP_003995170.1 KEGG: hor:Hore_06530 deoxyxylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein YP_003995171.1 KEGG: hor:Hore_06520 hypothetical protein YP_003995172.1 PFAM: Polyprenyl synthetase; KEGG: hor:Hore_06510 farnesyl-diphosphate synthase YP_003995173.1 KEGG: hor:Hore_06500 exodeoxyribonuclease VII, small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_003995174.1 KEGG: hor:Hore_06490 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_003995175.1 KEGG: hor:Hore_06470 glutamate synthase (NADPH) small subunit; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003995176.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: hor:Hore_06460 sulfide dehydrogenase (flavoprotein) subunit SudB YP_003995177.1 PFAM: aminotransferase class I and II; KEGG: tmt:Tmath_1214 aminotransferase class I and II YP_003995178.1 KEGG: hor:Hore_06300 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_003995179.1 PFAM: Protein of unknown function DUF2273; KEGG: bbe:BBR47_23340 hypothetical protein YP_003995180.1 PFAM: protein of unknown function DUF322; KEGG: hor:Hore_06280 hypothetical protein YP_003995181.1 PFAM: protein of unknown function DUF322; KEGG: tmt:Tmath_1140 protein of unknown function DUF322 YP_003995182.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: drt:Dret_1495 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003995183.1 KEGG: hor:Hore_06150 translation elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein YP_003995184.1 PFAM: peptidase M24; creatinase; KEGG: hor:Hore_06140 peptidase M24 YP_003995185.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: hor:Hore_06130 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_003995186.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: chy:CHY_0629 shikimate kinase/3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; shikimate kinase YP_003995187.1 PFAM: O-antigen polymerase; KEGG: dae:Dtox_3371 O-antigen polymerase YP_003995188.1 PFAM: type II and III secretion system protein; KEGG: hor:Hore_06090 type II and III secretion system protein YP_003995189.1 KEGG: pkn:PKH_130670 hypothetical protein YP_003995190.1 KEGG: tet:TTHERM_01014640 Response regulator receiver domain containing protein YP_003995191.1 KEGG: pvx:PVX_090325 reticulocyte binding protein 2 precursor (PvRBP-2) YP_003995192.1 KEGG: rbo:A1I_04625 glycosyltransferase YP_003995193.1 KEGG: sbi:SORBI_08g018460 hypothetical protein YP_003995194.1 KEGG: cbt:CLH_0375 pilin YP_003995195.1 KEGG: kra:Krad_3023 hypothetical protein YP_003995196.1 KEGG: hmo:HM1_0265 pilin assembly protein YP_003995197.1 KEGG: hor:Hore_06000 Tfp pilus assembly protein, major pilin PilA YP_003995198.1 PFAM: Type II secretion system F domain; KEGG: cpf:CPF_2569 type II secretion system protein F YP_003995199.1 KEGG: hor:Hore_05970 Tfp pilus assembly protein PilB; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_003995200.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; KEGG: hor:Hore_10900 alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: LeuA allosteric (dimerisation) domain-containing protein; pyruvate carboxyltransferase YP_003995201.1 KEGG: hor:Hore_10890 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003995202.1 KEGG: pmo:Pmob_1587 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_003995203.1 KEGG: hor:Hore_10870 3-isopropylmalate dehydratase, large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein YP_003995204.1 KEGG: hor:Hore_10860 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_003995205.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: pmo:Pmob_1590 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase YP_003995206.1 KEGG: hor:Hore_10840 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_003995207.1 KEGG: hor:Hore_10830 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_003995208.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: hor:Hore_10820 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003995209.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: hor:Hore_10810 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003995210.1 KEGG: amt:Amet_1753 transposase YP_003995211.1 KEGG: rbi:RB2501_13144 hypothetical protein YP_003995212.1 KEGG: cbe:Cbei_4943 response regulator receiver protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003995213.1 PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: hor:Hore_06090 type II and III secretion system protein YP_003995214.1 KEGG: ilo:IL0514 electron transfer flavoprotein subunit beta YP_003995215.1 KEGG: hor:Hore_06070 hypothetical protein YP_003995216.1 PFAM: Fimbrial assembly family protein; KEGG: hor:Hore_06060 Tfp pilus assembly protein PilN YP_003995217.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: hor:Hore_06050 Tfp pilus assembly protein, ATPase PilM YP_003995218.1 KEGG: tva:TVAG_471980 SRP YP_003995219.1 KEGG: dae:Dtox_3245 hypothetical protein YP_003995220.1 KEGG: cno:NT01CX_1599 hypothetical protein YP_003995221.1 KEGG: cpe:CPE2279 hypothetical protein YP_003995222.1 KEGG: dae:Dtox_3245 hypothetical protein YP_003995223.1 KEGG: cbk:CLL_A3296 prokaryotic N-methylation motif domain protein YP_003995224.1 KEGG: hor:Hore_06010 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_003995225.1 KEGG: dat:HRM2_11400 GspG1 YP_003995226.1 KEGG: hor:Hore_06000 Tfp pilus assembly protein, major pilin PilA YP_003995227.1 PFAM: Type II secretion system F domain; KEGG: hor:Hore_05990 Tfp pilus biogenesis protein PilC YP_003995228.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: hor:Hore_05980 Tfp pilus assembly protein, pilus retraction ATPase PilT; SMART: AAA ATPase YP_003995229.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: hor:Hore_05970 Tfp pilus assembly protein PilB YP_003995230.1 KEGG: hor:Hore_05960 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_003995231.1 KEGG: hor:Hore_05940 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003995232.1 PFAM: ferric-uptake regulator; KEGG: hor:Hore_05900 ferric uptake regulator, Fur family YP_003995233.1 KEGG: hor:Hore_05890 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein YP_003995234.1 PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein; KEGG: hor:Hore_05880 cell wall hydrolase SleB YP_003995235.1 KEGG: hor:Hore_05850 hypothetical protein YP_003995236.1 PFAM: peptidase U32; KEGG: hor:Hore_05840 peptidase U32 YP_003995237.1 PFAM: O-methyltransferase family 3; KEGG: hor:Hore_05830 O-methyltransferase family 3 YP_003995238.1 PFAM: aminodeoxychorismate lyase; KEGG: hor:Hore_05820 aminodeoxychorismate lyase YP_003995239.1 KEGG: hor:Hore_05810 hypothetical protein YP_003995240.1 KEGG: hor:Hore_05800 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_003995241.1 PFAM: protein of unknown function DUF965; KEGG: hor:Hore_05760 hypothetical protein YP_003995242.1 KEGG: hor:Hore_05750 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_003995243.1 TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; KEGG: hor:Hore_05700 tyrosyl-tRNA synthetase; SMART: RNA-binding S4 domain protein YP_003995244.1 KEGG: hor:Hore_05690 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003995245.1 TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; KEGG: hor:Hore_05680 MutS2 family protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2 YP_003995246.1 KEGG: hor:Hore_05670 DNA polymerase X family protein; PFAM: PHP domain protein; DNA polymerase beta domain protein region; SMART: DNA polymerase X; Helix-hairpin-helix DNA-binding class 1; phosphoesterase PHP domain protein YP_003995247.1 PFAM: Colicin V production protein; KEGG: hor:Hore_05660 colicin V production protein YP_003995248.1 KEGG: hor:Hore_05650 hypothetical protein YP_003995249.1 KEGG: hor:Hore_05640 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_003995250.1 KEGG: hor:Hore_05630 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003995251.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: hor:Hore_05620 tRNA/rRNA methyltransferase (SpoU) YP_003995252.1 KEGG: hor:Hore_05610 ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_003995253.1 KEGG: hor:Hore_05600 ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35 YP_003995254.1 KEGG: tmt:Tmath_1527 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_003995255.1 PFAM: nitroreductase; KEGG: aoe:Clos_0644 nitroreductase YP_003995256.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: nth:Nther_2244 Asp/Glu/hydantoin racemase YP_003995257.1 KEGG: hor:Hore_05580 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein YP_003995258.1 PFAM: cell envelope-related transcriptional attenuator; KEGG: hor:Hore_05530 cell envelope-related transcriptional attenuator YP_003995259.1 KEGG: chy:CHY_2436 lipoprotein protein YP_003995260.1 PFAM: MgtC/SapB transporter; KEGG: cyb:CYB_2116 MgtC family protein YP_003995261.1 KEGG: cac:CA_C3279 ChW repeat-containing protein YP_003995262.1 PFAM: YibE/F family protein; KEGG: aco:Amico_1697 YibE/F family protein YP_003995263.1 KEGG: aco:Amico_1698 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase YP_003995264.1 PFAM: Integrase catalytic region; KEGG: cth:Cthe_3182 integrase catalytic subunit YP_003995265.1 PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911 YP_003995266.1 KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region YP_003995267.1 KEGG: cac:CA_C3279 ChW repeat-containing protein YP_003995268.1 PFAM: YibE/F family protein; KEGG: aco:Amico_1697 YibE/F family protein YP_003995269.1 KEGG: dap:Dacet_0898 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase YP_003995270.1 KEGG: pmh:P9215_15151 hypothetical protein YP_003995271.1 KEGG: hor:Hore_15180 hypothetical protein YP_003995272.1 TIGRFAM: CRISPR-associated protein Cas4; KEGG: hor:Hore_15190 CRISPR-associated protein Cas4 YP_003995273.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: hor:Hore_15200 CRISPR-associated protein Cas2 YP_003995274.1 KEGG: hor:Hore_15210 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48 YP_003995275.1 TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; PFAM: helicase domain protein; KEGG: cth:Cthe_3204 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase ; helicase domain protein YP_003995276.1 TIGRFAM: CRISPR-associated protein Cas5, Hmari subtype; CRISPR-associated protein Cas5; KEGG: cth:Cthe_3203 CRISPR-associated Cas5 family Hmari subtype protein YP_003995277.1 KEGG: cth:Cthe_3202 CRISPR-associated Csh2 family protein; TIGRFAM: CRISPR-associated protein, Csh2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801 YP_003995278.1 KEGG: cth:Cthe_3201 CRISPR-associated Csh1 family protein; TIGRFAM: CRISPR-associated protein, TM1802 family; CRISPR-associated protein, Csh1 family; PFAM: CRISPR-associated protein TM1802 YP_003995279.1 KEGG: hor:Hore_15260 helix-turn-helix type 11 domain protein YP_003995280.1 KEGG: tgr:Tgr7_0290 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_003995281.1 TIGRFAM: 1-phosphofructokinase; KEGG: gbm:Gbem_3234 1-phosphofructokinase; PFAM: PfkB domain protein YP_003995282.1 KEGG: amt:Amet_3238 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003995283.1 KEGG: oih:OB1900 manganese transport transcriptional regulator; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_003995284.1 PFAM: ABC-3 protein; KEGG: tra:Trad_0769 ABC-3 protein YP_003995285.1 KEGG: aeh:Mlg_1042 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995286.1 PFAM: periplasmic solute binding protein; KEGG: tra:Trad_0767 periplasmic solute binding protein YP_003995287.1 KEGG: tai:Taci_1248 hypothetical protein YP_003995288.1 KEGG: tko:TK0959 hypothetical protein YP_003995289.1 PFAM: HI0933 family protein; KEGG: mpl:Mpal_0927 HI0933 family protein YP_003995290.1 KEGG: clj:CLJU_c37820 flavoredoxin YP_003995291.1 KEGG: cpy:Cphy_1255 peptidylprolyl isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_003995292.1 PFAM: MscS Mechanosensitive ion channel; KEGG: zpr:ZPR_2462 membrane protein YP_003995293.1 PFAM: FAD linked oxidase domain protein; KEGG: clj:CLJU_c05910 FAD/FMN-containing dehydrogenase YP_003995294.1 PFAM: Integrase catalytic region; KEGG: tte:TTE2218 transposase YP_003995295.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: clj:CLJU_c20340 electron transfer flavoprotein subunit alpha YP_003995296.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: clj:CLJU_c20330 electron transfer flavoprotein subunit beta YP_003995297.1 KEGG: amt:Amet_0539 hypothetical protein YP_003995298.1 KEGG: hor:Hore_11020 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003995299.1 KEGG: hor:Hore_11010 RNA methyltransferase, TrmH family, group 2; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_003995300.1 KEGG: hor:Hore_11000 beta-lactamase domain protein YP_003995301.1 KEGG: hor:Hore_10970 predicted membrane protein YP_003995302.1 KEGG: hor:Hore_10950 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D YP_003995303.1 KEGG: hor:Hore_10930 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc YP_003995304.1 PFAM: protein of unknown function DUF296; KEGG: tit:Thit_0241 protein of unknown function DUF296 YP_003995305.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: hor:Hore_10790 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_003995306.1 KEGG: hor:Hore_10780 hypothetical protein YP_003995307.1 SMART: AAA ATPase; KEGG: hor:Hore_10770 uridine kinase YP_003995308.1 PFAM: domain of unknown function DUF1730; KEGG: hor:Hore_10760 iron-sulfur cluster binding protein YP_003995309.1 PFAM: major facilitator superfamily MFS_1; KEGG: hor:Hore_10750 major facilitator superfamily MFS_1 YP_003995310.1 PFAM: peptidase M16 domain protein; KEGG: hor:Hore_10730 peptidase M16 domain protein YP_003995311.1 PFAM: peptidase M16 domain protein; KEGG: hor:Hore_10720 peptidase M16 domain protein YP_003995312.1 PFAM: protein of unknown function UPF0182; KEGG: hor:Hore_10710 glutamate--cysteine ligase/ amino acid ligase YP_003995313.1 PFAM: amidohydrolase; KEGG: hor:Hore_10670 guanine deaminase YP_003995314.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: hor:Hore_10650 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003995315.1 KEGG: hor:Hore_10640 hypothetical protein YP_003995316.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mmh:Mmah_0410 deoxyribodipyrimidine photo-lyase type II YP_003995317.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ctc:CTC00481 mechanosensitive ion-channel YP_003995318.1 KEGG: hor:Hore_10570 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003995319.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: hor:Hore_10550 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_003995320.1 PFAM: protein of unknown function DUF205; KEGG: hor:Hore_10540 acyl-phosphate glycerol-3-phosphate acyltransferase YP_003995321.1 KEGG: hor:Hore_10530 small GTP-binding protein; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003995322.1 PFAM: protein of unknown function DUF512; KEGG: tjr:TherJR_1583 protein of unknown function DUF512 YP_003995323.1 KEGG: hor:Hore_10450 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; RNA binding S1 domain protein YP_003995324.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: hor:Hore_10400 1-acylglycerol-3-phosphate O-acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003995325.1 KEGG: hor:Hore_10390 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase YP_003995326.1 KEGG: hor:Hore_10340 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class YP_003995327.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: hor:Hore_10320 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_003995328.1 KEGG: hor:Hore_10300 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_003995329.1 KEGG: hor:Hore_10290 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003995330.1 KEGG: hor:Hore_10270 enoyl-(acyl-carrier-protein) reductase II; TIGRFAM: enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase NPD YP_003995331.1 KEGG: hor:Hore_10250 phosphate acyl-(acyl carrier protein) acyltransferase; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_003995332.1 KEGG: hor:Hore_10230 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_003995333.1 PFAM: protein of unknown function DUF177; KEGG: hor:Hore_10220 predicted metal-binding, possibly nucleic acid-binding protein YP_003995334.1 KEGG: hor:Hore_10210 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_003995335.1 KEGG: hor:Hore_10200 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_003995336.1 PFAM: protein of unknown function DUF795; KEGG: hor:Hore_10190 predicted nucleotidyltransferase YP_003995337.1 KEGG: hor:Hore_10180 PDZ/DHR/GLGF domain protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003995338.1 PFAM: Patatin; KEGG: hor:Hore_10170 patatin YP_003995339.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: hor:Hore_19140 Na+/H+ antiporter NhaC YP_003995340.1 PFAM: PP-loop domain protein; KEGG: hor:Hore_20940 PP-loop domain protein YP_003995341.1 PFAM: protein of unknown function DUF307; KEGG: cbt:CLH_1830 hypothetical protein YP_003995342.1 PFAM: UbiA prenyltransferase; KEGG: cth:Cthe_3041 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_003995343.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: hor:Hore_10140 pantetheine-phosphate adenylyltransferase; PFAM: cytidylyltransferase YP_003995344.1 KEGG: hor:Hore_10130 methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein CHP00095 YP_003995345.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: hor:Hore_10120 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein YP_003995346.1 KEGG: hor:Hore_10110 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003995347.1 KEGG: hor:Hore_10100 Dak phosphatase; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase YP_003995348.1 PFAM: protein of unknown function DUF322; KEGG: hor:Hore_10090 hypothetical protein YP_003995349.1 KEGG: hor:Hore_10080 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_003995350.1 KEGG: hor:Hore_10040 thiamine pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein YP_003995351.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: hor:Hore_09980 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003995352.1 KEGG: hor:Hore_09970 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_003995353.1 KEGG: hor:Hore_09960 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein YP_003995354.1 PFAM: Stage II sporulation protein E; KEGG: hor:Hore_09950 phosphoric monoester hydrolase; SMART: protein phosphatase 2C domain protein YP_003995355.1 KEGG: hor:Hore_09940 radical SAM enzyme, Cfr family; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_003995356.1 KEGG: hor:Hore_09930 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_003995357.1 PFAM: peptidase membrane zinc metallopeptidase; KEGG: hor:Hore_09910 peptidase membrane zinc metallopeptidase YP_003995358.1 KEGG: hor:Hore_09900 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_003995359.1 KEGG: hor:Hore_09890 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003995360.1 TIGRFAM: primosomal protein N'; KEGG: hor:Hore_09880 primosomal protein N' YP_003995361.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: tmt:Tmath_0555 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003995362.1 KEGG: hor:Hore_09840 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_003995363.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: hor:Hore_09830 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003995364.1 KEGG: hor:Hore_09820 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_003995365.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: hor:Hore_09810 guanylate kinase; PFAM: guanylate kinase YP_003995366.1 PFAM: protein of unknown function DUF370; KEGG: hor:Hore_09800 hypothetical protein YP_003995367.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: hor:Hore_09780 fibronectin-binding A domain protein YP_003995368.1 KEGG: hor:Hore_09770 apolipoprotein N-acyltransferase YP_003995369.1 KEGG: hor:Hore_09730 translation elongation factor G; TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor G domain-containing protein YP_003995370.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: nth:Nther_0694 beta-lactamase domain protein YP_003995371.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: hor:Hore_09330 ribosomal large subunit pseudouridine synthase D; SMART: RNA-binding S4 domain protein YP_003995372.1 KEGG: csc:Csac_1927 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_003995373.1 KEGG: hor:Hore_09270 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_003995374.1 KEGG: hor:Hore_09260 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein YP_003995375.1 KEGG: hor:Hore_09250 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003995376.1 PFAM: protein of unknown function YGGT; KEGG: hor:Hore_09240 YGGT family YP_003995377.1 PFAM: alanine racemase domain protein; KEGG: hor:Hore_09220 conserved hypothetical protein TIGR00044 YP_003995378.1 KEGG: hor:Hore_09210 membrane fusion protein YP_003995379.1 KEGG: hor:Hore_09130 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_003995380.1 KEGG: hor:Hore_09120 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_003995381.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: hor:Hore_09110 polypeptide-transport-associated domain protein FtsQ-type YP_003995382.1 KEGG: hor:Hore_09100 UDP-N-acetylmuramate--alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_003995383.1 KEGG: hor:Hore_09090 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_003995384.1 KEGG: hor:Hore_09080 stage V sporulation protein E; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_003995385.1 KEGG: hor:Hore_09070 UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003995386.1 KEGG: hor:Hore_09060 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_003995387.1 KEGG: hor:Hore_09050 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003995388.1 KEGG: hor:Hore_09040 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003995389.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: hor:Hore_09030 stage V sporulation protein D; SMART: PASTA domain containing protein YP_003995390.1 PFAM: Septum formation initiator; KEGG: hor:Hore_09020 septum formation initiator YP_003995391.1 KEGG: hor:Hore_09010 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_003995392.1 KEGG: hor:Hore_09000 MraZ protein; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_003995393.1 KEGG: hor:Hore_08990 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_003995394.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: hor:Hore_08980 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_003995395.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: hor:Hore_08970 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003995396.1 PFAM: ferric-uptake regulator; KEGG: hor:Hore_08960 ferric uptake regulator, Fur family YP_003995397.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; KEGG: hor:Hore_08950 ribonuclease H; PFAM: ribonuclease H; Carboxymuconolactone decarboxylase YP_003995398.1 KEGG: tmt:Tmath_2067 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_003995399.1 KEGG: hor:Hore_14450 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003995400.1 KEGG: tte:TTE1820 phosphotransferase system, HPr-related proteins; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003995401.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: hor:Hore_08130 glycerol-3-phosphate responsive antiterminator YP_003995402.1 PFAM: protein of unknown function DUF1667; KEGG: hut:Huta_0681 protein of unknown function DUF1667 YP_003995403.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: hut:Huta_0682 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003995404.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: hut:Huta_0683 FAD dependent oxidoreductase YP_003995405.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2452 binding-protein-dependent transport systems inner membrane component YP_003995406.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tra:Trad_1128 binding-protein-dependent transport systems inner membrane component YP_003995407.1 PFAM: extracellular solute-binding protein family 5; KEGG: tra:Trad_1129 extracellular solute-binding protein family 5 YP_003995408.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: hor:Hore_08900 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_003995409.1 PFAM: aminotransferase class V; KEGG: hor:Hore_08880 aminotransferase class V YP_003995410.1 KEGG: hor:Hore_08870 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003995411.1 PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; KEGG: hor:Hore_12020 conserved hypothetical protein TIGR00257 YP_003995412.1 KEGG: hor:Hore_12030 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_003995413.1 KEGG: hor:Hore_12040 5,10-methenyltetrahydrofolate synthetase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_003995414.1 KEGG: hor:Hore_12140 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_003995415.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: hor:Hore_12150 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_003995416.1 KEGG: hor:Hore_12160 peptidyl-prolyl cis-trans isomerase; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_003995417.1 KEGG: hor:Hore_12170 beta-lactamase domain protein YP_003995418.1 KEGG: hor:Hore_12180 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_003995419.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: hor:Hore_12190 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein YP_003995420.1 KEGG: hor:Hore_12200 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003995421.1 KEGG: hor:Hore_12210 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_003995422.1 PFAM: ABC-1 domain-containing protein; KEGG: hor:Hore_12230 2-octaprenylphenol hydroxylase YP_003995423.1 KEGG: hor:Hore_12250 protein-export membrane protein SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003995424.1 KEGG: hor:Hore_12260 protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003995425.1 KEGG: hor:Hore_12270 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_003995426.1 KEGG: hor:Hore_12280 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_003995427.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: hor:Hore_12290 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_003995428.1 KEGG: hor:Hore_12300 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_003995429.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: hor:Hore_12310 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_003995430.1 KEGG: hor:Hore_12320 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein YP_003995431.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: hor:Hore_12330 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003995432.1 PFAM: protein of unknown function DUF28; KEGG: hor:Hore_12350 hypothetical protein YP_003995433.1 KEGG: hor:Hore_12360 hypothetical protein YP_003995434.1 KEGG: hor:Hore_12370 hypothetical protein YP_003995435.1 PFAM: protein of unknown function DUF34; KEGG: hor:Hore_12390 conserved hypothetical protein TIGR00486 YP_003995436.1 KEGG: hor:Hore_12400 RNA polymerase, sigma 70 subunit, RpoD family; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein YP_003995437.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; KEGG: hor:Hore_12410 DNA primase; SMART: Toprim sub domain-containing protein YP_003995438.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: hor:Hore_12420 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003995439.1 PFAM: protein of unknown function DUF299; KEGG: hor:Hore_12430 hypothetical protein YP_003995440.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: hor:Hore_12440 glycyl-tRNA synthetase, beta subunit YP_003995441.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: hor:Hore_12450 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit YP_003995442.1 KEGG: hor:Hore_12480 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_003995443.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: hor:Hore_12490 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_003995444.1 KEGG: hor:Hore_12500 magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein YP_003995445.1 manually curated; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; KEGG: hor:Hore_12510 GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_003995446.1 TIGRFAM: cytidine deaminase; KEGG: cbf:CLI_2999 cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding YP_003995447.1 KEGG: hor:Hore_12530 hypothetical protein YP_003995448.1 KEGG: hor:Hore_12560 membrane CBS domain protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein YP_003995449.1 PFAM: diacylglycerol kinase; phosphoesterase PA-phosphatase related; KEGG: hor:Hore_12570 diacylglycerol kinase YP_003995450.1 PFAM: protein of unknown function UPF0054; KEGG: hor:Hore_12580 conserved hypothetical protein TIGR00043 YP_003995451.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; KEGG: hor:Hore_12590 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003995452.1 PFAM: PhoH family protein; KEGG: hor:Hore_12600 PhoH family protein YP_003995453.1 KEGG: edi:EDI_156370 ATP-dependent RNA helicase YP_003995454.1 KEGG: oih:OB1959 hypothetical protein YP_003995455.1 PFAM: protein of unknown function DUF107; peptidase S14 ClpP; KEGG: dth:DICTH_0603 YqeZ YP_003995456.1 KEGG: hor:Hore_12740 GatB/YqeY domain protein YP_003995457.1 PFAM: histidine triad (HIT) protein; KEGG: hor:Hore_12750 histidine triad (HIT) protein YP_003995458.1 TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; protein of unknown function UPF0004; KEGG: hor:Hore_12760 MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB YP_003995459.1 PFAM: protein of unknown function DUF558; KEGG: hor:Hore_12770 conserved hypothetical protein TIGR00046 YP_003995460.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: hor:Hore_12790 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_003995461.1 KEGG: hor:Hore_12800 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_003995462.1 PFAM: GrpE protein; KEGG: hor:Hore_12810 GrpE protein YP_003995463.1 KEGG: hor:Hore_12820 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like YP_003995464.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; KEGG: hor:Hore_12830 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_003995465.1 KEGG: hor:Hore_12840 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_003995466.1 KEGG: hor:Hore_12880 ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_003995467.1 KEGG: hor:Hore_12890 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta YP_003995468.1 KEGG: hor:Hore_12920 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_003995469.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; KEGG: hor:Hore_12930 competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003995470.1 TIGRFAM: uridine kinase; KEGG: hor:Hore_12970 uridine kinase YP_003995471.1 KEGG: cbt:CLH_3384 hypothetical protein YP_003995472.1 PFAM: Patatin; KEGG: tpd:Teth39_0705 patatin YP_003995473.1 KEGG: dth:DICTH_1896 hypoxanthine phosphoribosyl transferase with additional GAF motif YP_003995474.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: dth:DICTH_1898 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003995475.1 KEGG: hor:Hore_04850 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; copper ion binding protein; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003995476.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hor:Hore_02910 acetyltransferase YP_003995477.1 KEGG: hor:Hore_06660 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003995478.1 KEGG: nth:Nther_0991 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003995479.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: hor:Hore_13330 positive regulator of sigma E, RseC/MucC YP_003995480.1 KEGG: hor:Hore_13370 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_003995481.1 KEGG: hor:Hore_13380 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_003995482.1 KEGG: hor:Hore_13390 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator YP_003995483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: lba:Lebu_2003 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003995484.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: hor:Hore_13410 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_003995485.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: pmo:Pmob_0648 ferripyochelin binding protein (fbp) YP_003995486.1 PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: ctc:CTC01806 5-methyltetrahydrofolate--homocysteine methyltransferase YP_003995487.1 PFAM: Vitamin B12 dependent methionine synthase activation region; KEGG: cbe:Cbei_1401 vitamin B12 dependent methionine synthase, activation region YP_003995488.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: cbi:CLJ_B1732 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_003995489.1 PFAM: Heavy metal transport/detoxification protein; KEGG: amt:Amet_3271 heavy metal transport/detoxification protein YP_003995490.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: pmo:Pmob_1109 hypothetical protein YP_003995491.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: pmo:Pmob_1110 hypothetical protein YP_003995492.1 KEGG: bse:Bsel_2883 hypothetical protein YP_003995493.1 KEGG: gka:GK1525 cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003995494.1 KEGG: hor:Hore_08870 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003995495.1 KEGG: sli:Slin_1813 hypothetical protein YP_003995496.1 KEGG: tit:Thit_1153 DNA mismatch repair protein MutL YP_003995497.1 PFAM: protein of unknown function UPF0027; KEGG: hor:Hore_22420 hypothetical protein YP_003995498.1 KEGG: hor:Hore_15890 conserved protein of unknown function BmrU; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region YP_003995499.1 PFAM: major facilitator superfamily MFS_1; KEGG: tpd:Teth39_1801 major facilitator transporter YP_003995500.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: cbf:CLI_1563 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_003995501.1 KEGG: dsa:Desal_1778 sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003995502.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: tcx:Tcr_1069 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_003995503.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: aeh:Mlg_0096 peptidoglycan binding domain-containing protein YP_003995504.1 KEGG: nth:Nther_1956 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003995505.1 KEGG: hor:Hore_18310 hypothetical protein YP_003995506.1 PFAM: nitroreductase; KEGG: tjr:TherJR_1090 nitroreductase YP_003995507.1 PFAM: sodium:neurotransmitter symporter; KEGG: nth:Nther_0698 sodium:neurotransmitter symporter YP_003995508.1 PFAM: (Uracil-5)-methyltransferase; Methyltransferase type 11; KEGG: cbl:CLK_2256 23S rRNA (uracil-5-)-methyltransferase RumA YP_003995509.1 KEGG: ctc:CTC00526 integral membrane protein; manually curated; PFAM: protein of unknown function DUF204 YP_003995510.1 KEGG: tpd:Teth39_1726 hypothetical protein YP_003995511.1 PFAM: protein of unknown function DUF534; KEGG: bbe:BBR47_40410 hypothetical protein YP_003995512.1 PFAM: inner-membrane translocator; KEGG: hor:Hore_19980 inner-membrane translocator YP_003995513.1 KEGG: vpr:Vpar_0767 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995514.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: hor:Hore_20830 kojibiose phosphorylase YP_003995515.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hor:Hore_20850 binding-protein-dependent transport systems inner membrane component YP_003995516.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hor:Hore_20860 binding-protein-dependent transport systems inner membrane component YP_003995517.1 PFAM: extracellular solute-binding protein family 1; KEGG: hor:Hore_20870 extracellular solute-binding protein family 1 YP_003995518.1 KEGG: hor:Hore_20880 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003995519.1 PFAM: extracellular solute-binding protein family 5; KEGG: tai:Taci_0008 extracellular solute-binding protein family 5 YP_003995520.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: hor:Hore_04930 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_003995521.1 PFAM: Lytic transglycosylase catalytic; KEGG: dau:Daud_1407 lytic transglycosylase, catalytic YP_003995522.1 KEGG: hor:Hore_04890 dephospho-CoA kinase; TIGRFAM: methylglyoxal synthase; dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; MGS domain protein YP_003995523.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: hor:Hore_04870 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_003995524.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: hor:Hore_04860 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; DNA-directed DNA polymerase YP_003995525.1 KEGG: clj:CLJU_c15810 two component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003995526.1 KEGG: tte:TTE1016 response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_003995527.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: hor:Hore_00650 2-alkenal reductase; SMART: PDZ/DHR/GLGF domain protein YP_003995528.1 TIGRFAM: phosphoglycerate mutase 1 family; KEGG: cpc:Cpar_1493 phosphoglyceromutase; PFAM: Phosphoglycerate mutase YP_003995529.1 PFAM: protein of unknown function DUF368; KEGG: mif:Metin_0840 protein of unknown function DUF368 YP_003995530.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: hor:Hore_09430 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003995531.1 KEGG: hor:Hore_09420 dihydroorotate oxidase B, catalytic subunit; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase YP_003995532.1 PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: hor:Hore_09410 dihydroorotate oxidase B, electron transfer subunit YP_003995533.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: hor:Hore_09390 orotidine-5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003995534.1 KEGG: hor:Hore_09380 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_003995535.1 TIGRFAM: aspartate carbamoyltransferase; KEGG: hor:Hore_09370 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003995536.1 KEGG: hor:Hore_09360 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_003995537.1 KEGG: hor:Hore_09350 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003995538.1 KEGG: rru:Rru_A0923 hypothetical protein YP_003995539.1 KEGG: tjr:TherJR_1830 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_003995540.1 KEGG: drm:Dred_1683 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_003995541.1 KEGG: hor:Hore_02980 NADH dehydrogenase I subunit G; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; iron hydrogenase small subunit YP_003995542.1 KEGG: hor:Hore_02970 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_003995543.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: hor:Hore_02960 NADH dehydrogenase I subunit E YP_003995544.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; Fe-S cluster domain protein; KEGG: hor:Hore_02950 PAS/PAC sensor protein; SMART: AAA ATPase; PAS domain containing protein YP_003995545.1 KEGG: kol:Kole_1147 hypothetical protein YP_003995546.1 KEGG: kol:Kole_1148 hypothetical protein YP_003995547.1 KEGG: cth:Cthe_0265 aminotransferase, class V; PFAM: aminotransferase class V YP_003995548.1 KEGG: nth:Nther_2770 hypothetical protein YP_003995549.1 KEGG: pmo:Pmob_1216 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003995550.1 PFAM: Integrase catalytic region; KEGG: tte:TTE2218 transposase YP_003995551.1 KEGG: hor:Hore_05400 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003995552.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: hor:Hore_12050 NADH dehydrogenase I subunit M YP_003995553.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: hor:Hore_18420 substrate-binding region of ABC-type glycine betaine transport system YP_003995554.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hor:Hore_18430 binding-protein-dependent transport systems inner membrane component YP_003995555.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hor:Hore_18430 binding-protein-dependent transport systems inner membrane component YP_003995556.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: hor:Hore_18440 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase; CBS domain containing protein YP_003995557.1 PFAM: phosphatidylglycerophosphatase A; KEGG: bpu:BPUM_1917 phosphatidylglycerophosphatase A YP_003995558.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: cpi:Cpin_0076 ADP-ribosylation/crystallin J1 YP_003995559.1 KEGG: hut:Huta_2288 hypothetical protein YP_003995560.1 PFAM: GCN5-related N-acetyltransferase; KEGG: lsl:LSL_0023 hypothetical protein YP_003995561.1 KEGG: ctc:CTC00071 diaminopropionate ammonia-lyase; TIGRFAM: diaminopropionate ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003995562.1 PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase YP_003995563.1 PFAM: Integrase catalytic region; KEGG: aoe:Clos_0736 integrase catalytic region YP_003995564.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: pth:PTH_0546 hypothetical protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003995565.1 PFAM: Integrase catalytic region; KEGG: cpr:CPR_0383 IS1470, transposase YP_003995566.1 KEGG: mab:MAB_4746 membrane protein, MmpL YP_003995567.1 KEGG: gym:GYMC10_4644 helix-turn-helix domain protein YP_003995568.1 PFAM: Integrase catalytic region; KEGG: cth:Cthe_3182 integrase catalytic subunit YP_003995569.1 KEGG: cyc:PCC7424_2216 hypothetical protein YP_003995570.1 KEGG: aoe:Clos_1183 transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003995571.1 KEGG: ctc:CTC02377 hypothetical protein YP_003995572.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_003995573.1 PFAM: Formiminotransferase-cyclodeaminase; KEGG: cac:CA_C2310 methenyl tetrahydrofolate cyclohydrolase (serine cycle enzyme) YP_003995574.1 KEGG: mta:Moth_1516 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_003995575.1 PFAM: Curli production assembly/transport component CsgG; KEGG: csa:Csal_1066 curli production assembly/transport component CsgG YP_003995576.1 PFAM: Curli production assembly/transport component CsgG; KEGG: csa:Csal_1066 curli production assembly/transport component CsgG YP_003995577.1 KEGG: dal:Dalk_0746 hypothetical protein YP_003995578.1 KEGG: pmu:PM0736 molecular chaperone DnaK YP_003995579.1 PFAM: Curlin associated repeat-containing protein; KEGG: saz:Sama_2947 hypothetical protein YP_003995580.1 KEGG: psa:PST_2861 PPE repeat-containing protein YP_003995581.1 PFAM: transcriptional activator domain; KEGG: tpt:Tpet_1624 SARP family transcriptional regulator YP_003995582.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sth:STH2049 iron-containing alcohol dehydrogenase YP_003995583.1 KEGG: hch:HCH_05055 hypothetical protein YP_003995584.1 PFAM: Conserved hypothetical protein CHP01440; KEGG: tte:TTE0860 hypothetical protein YP_003995585.1 KEGG: gym:GYMC10_4644 helix-turn-helix domain protein YP_003995586.1 TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; KEGG: hor:Hore_11990 radical SAM protein, TIGR01212 family; SMART: Elongator protein 3/MiaB/NifB YP_003995587.1 KEGG: hor:Hore_19230 biotin (acetyl-CoA carboxylase) synthetase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_003995588.1 KEGG: hor:Hore_03220 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region YP_003995589.1 KEGG: hor:Hore_03210 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_003995590.1 KEGG: hor:Hore_03180 hypothetical protein YP_003995591.1 PFAM: tryptophan RNA-binding attenuator protein; KEGG: hor:Hore_03170 transcription attenuation protein MtrB YP_003995592.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: hor:Hore_03140 DNA polymerase III catalytic subunit, DnaE type; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_003995593.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: hor:Hore_03110 nitrogen-fixing NifU domain protein YP_003995594.1 KEGG: hor:Hore_03100 hypothetical protein YP_003995595.1 KEGG: hor:Hore_03090 phosphodiesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase YP_003995596.1 KEGG: hor:Hore_03080 hypothetical protein YP_003995597.1 KEGG: hor:Hore_03040 regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB YP_003995598.1 KEGG: hor:Hore_03030 hypothetical protein YP_003995599.1 KEGG: hor:Hore_03000 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase YP_003995600.1 KEGG: nth:Nther_2612 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003995601.1 KEGG: hor:Hore_02400 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein YP_003995602.1 KEGG: hor:Hore_02390 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003995603.1 PFAM: NUDIX hydrolase; KEGG: pmo:Pmob_0533 NUDIX hydrolase YP_003995604.1 KEGG: hor:Hore_02340 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase YP_003995605.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; KEGG: hor:Hore_02330 glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase YP_003995606.1 KEGG: hor:Hore_02320 glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_003995607.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: hor:Hore_02300 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein YP_003995608.1 KEGG: hor:Hore_02290 ATP-dependent DNA helicase PcrA; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase YP_003995609.1 KEGG: hor:Hore_02280 hypothetical protein; PFAM: protein of unknown function DUF123; SMART: Excinuclease ABC C subunit domain protein YP_003995610.1 KEGG: hor:Hore_11140 small GTP-binding protein; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003995611.1 PFAM: Hsp33 protein; KEGG: gct:GC56T3_0063 HSP33 protein YP_003995612.1 KEGG: cbo:CBO2313 lipoprotein YP_003995613.1 KEGG: cth:Cthe_0208 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_003995614.1 KEGG: dae:Dtox_3949 hypothetical protein YP_003995615.1 PFAM: UvrD/REP helicase; KEGG: dae:Dtox_3948 UvrD/REP helicase YP_003995616.1 KEGG: dae:Dtox_3947 hypothetical protein YP_003995617.1 PFAM: protein of unknown function DUF456; KEGG: hor:Hore_11270 hypothetical protein YP_003995618.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tsi:TSIB_1900 thioredoxin peroxidase YP_003995619.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: hor:Hore_02150 FAD dependent oxidoreductase YP_003995620.1 KEGG: hor:Hore_02030 TrpR like protein, YerC/YecD; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor YP_003995621.1 KEGG: hor:Hore_02020 GMP synthase (glutamine-hydrolyzing); TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_003995622.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: tte:TTE0981 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_003995623.1 PFAM: protein of unknown function DUF299; KEGG: amt:Amet_3020 hypothetical protein YP_003995624.1 KEGG: hor:Hore_02010 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003995625.1 PFAM: Chaperonin Cpn10; KEGG: hor:Hore_02000 chaperonin GroES (HSP10) YP_003995626.1 PFAM: Radical SAM domain protein; KEGG: hor:Hore_01990 radical SAM domain protein YP_003995627.1 KEGG: hor:Hore_01980 metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_003995628.1 PFAM: peptidase M22 glycoprotease; KEGG: hmo:HM1_1718 glycoprotease protein family member YP_003995629.1 PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: hor:Hore_01950 conserved hypothetical nucleotide-binding protein TIGR00150 YP_003995630.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: hor:Hore_01940 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003995631.1 KEGG: hor:Hore_01930 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase YP_003995632.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: hor:Hore_01920 glutamate 5-kinase; SMART: PUA domain containing protein YP_003995633.1 KEGG: sca:Sca_1066 PTS system, glucose-specific IIA component; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain YP_003995634.1 KEGG: dae:Dtox_0172 hydrogenase, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit YP_003995635.1 KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_003995636.1 KEGG: nth:Nther_0098 ferredoxin-like protein YP_003995637.1 KEGG: tte:TTE0891 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003995638.1 KEGG: tjr:TherJR_0740 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_003995639.1 KEGG: dtu:Dtur_0915 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_003995640.1 KEGG: kol:Kole_0025 iron-sulfur binding hydrogenase YP_003995641.1 PFAM: Fe-S cluster domain protein; KEGG: ate:Athe_1292 Fe-S cluster domain protein YP_003995642.1 KEGG: ate:Athe_1291 anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003995643.1 KEGG: csc:Csac_1855 hypothetical protein YP_003995644.1 PFAM: PemK family protein; KEGG: hor:Hore_01740 transcriptional modulator of MazE/toxin, MazF YP_003995645.1 KEGG: hor:Hore_01730 transcriptional regulator, CopG family YP_003995646.1 KEGG: hor:Hore_01720 hypothetical protein YP_003995647.1 KEGG: hor:Hore_01710 DNA helicase; TIGRFAM: DNA helicase; PFAM: type III restriction protein res subunit; DbpA RNA-binding domain protein YP_003995648.1 KEGG: hor:Hore_01700 dCTP deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase YP_003995649.1 KEGG: hor:Hore_01670 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain-containing protein; protein of unknown function UPF0031 YP_003995650.1 KEGG: gbm:Gbem_1260 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_003995651.1 KEGG: hor:Hore_01570 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II YP_003995652.1 KEGG: hor:Hore_01560 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003995653.1 KEGG: drm:Dred_0293 YbbR family protein YP_003995654.1 PFAM: protein of unknown function DUF147; KEGG: mta:Moth_2248 hypothetical protein YP_003995655.1 KEGG: hor:Hore_02510 hypothetical protein YP_003995656.1 PFAM: Radical SAM domain protein; KEGG: fno:Fnod_0983 radical SAM domain-containing protein YP_003995657.1 PFAM: AMMECR1 domain protein; KEGG: hor:Hore_02490 AMMECR1 domain protein YP_003995658.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: hor:Hore_02480 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003995659.1 PFAM: ribosomal protein S9; KEGG: hor:Hore_02470 ribosomal protein S9 YP_003995660.1 KEGG: hor:Hore_02460 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_003995661.1 KEGG: hor:Hore_02450 pseudouridylate synthase I; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003995662.1 PFAM: cobalt transport protein; KEGG: hor:Hore_02440 cobalt transport protein YP_003995663.1 KEGG: hor:Hore_02430 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995664.1 KEGG: hor:Hore_02420 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995665.1 KEGG: hor:Hore_01460 ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_003995666.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: hor:Hore_01450 DNA-directed RNA polymerase, alpha subunit; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003995667.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: hor:Hore_01440 ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_003995668.1 KEGG: hor:Hore_01430 ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_003995669.1 KEGG: hor:Hore_01420 ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_003995670.1 manually curated; TIGRFAM: ribosomal protein L36; KEGG: hor:Hore_01410 ribosomal protein L36; PFAM: ribosomal protein L36 YP_003995671.1 KEGG: hor:Hore_01400 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_003995672.1 KEGG: hor:Hore_01380 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003995673.1 KEGG: hor:Hore_01370 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein YP_003995674.1 KEGG: hor:Hore_01360 preprotein translocase, SecY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_003995675.1 TIGRFAM: ribosomal protein L15; KEGG: hor:Hore_01350 ribosomal protein L15 YP_003995676.1 KEGG: hor:Hore_01340 ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein YP_003995677.1 KEGG: hor:Hore_01330 ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_003995678.1 KEGG: hor:Hore_01320 ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_003995679.1 PFAM: ribosomal protein S8; KEGG: hor:Hore_01310 ribosomal protein S8 YP_003995680.1 PFAM: ribosomal protein S14; KEGG: hor:Hore_01300 ribosomal protein S14 YP_003995681.1 KEGG: hor:Hore_01290 ribosomal protein L5 YP_003995682.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: hor:Hore_01280 ribosomal protein L24; SMART: KOW domain protein YP_003995683.1 KEGG: hor:Hore_01270 ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_003995684.1 KEGG: hor:Hore_01260 ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_003995685.1 KEGG: hor:Hore_01250 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_003995686.1 KEGG: hor:Hore_01240 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_003995687.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: hor:Hore_01230 ribosomal protein S3; SMART: KH domain protein YP_003995688.1 KEGG: hor:Hore_01220 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_003995689.1 KEGG: hor:Hore_01210 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_003995690.1 KEGG: hor:Hore_01200 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_003995691.1 PFAM: Ribosomal protein L25/L23; KEGG: hor:Hore_01190 ribosomal protein L25/L23 YP_003995692.1 PFAM: ribosomal protein L4/L1e; KEGG: hor:Hore_01180 ribosomal protein L4/L1e YP_003995693.1 KEGG: hor:Hore_01170 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_003995694.1 KEGG: hor:Hore_01160 ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_003995695.1 KEGG: hor:Hore_01150 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_003995696.1 KEGG: hor:Hore_01140 translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_003995697.1 KEGG: hor:Hore_01130 ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_003995698.1 KEGG: hor:Hore_01120 ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_003995699.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: hor:Hore_01110 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_003995700.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: hor:Hore_01100 DNA-directed RNA polymerase, beta' subunit; SMART: RNA polymerase I subunit A domain protein YP_003995701.1 KEGG: hor:Hore_01090 DNA-directed RNA polymerase, beta subunit; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7 YP_003995702.1 KEGG: hor:Hore_01080 ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_003995703.1 PFAM: ribosomal protein L10; KEGG: hor:Hore_01070 ribosomal protein L10 YP_003995704.1 KEGG: hor:Hore_01060 ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_003995705.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: hor:Hore_01050 ribosomal protein L11; SMART: ribosomal protein L11 YP_003995706.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: hor:Hore_01040 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein YP_003995707.1 KEGG: hor:Hore_01030 preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_003995708.1 manually curated; TIGRFAM: ribosomal protein L33; KEGG: hor:Hore_01020 ribosomal protein L33; PFAM: ribosomal protein L33 YP_003995709.1 KEGG: hor:Hore_01150 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_003995710.1 KEGG: hor:Hore_01000 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003995711.1 KEGG: hor:Hore_00990 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_003995712.1 TIGRFAM: thymidylate synthase, flavin-dependent; KEGG: hor:Hore_00980 thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX YP_003995713.1 KEGG: hor:Hore_00960 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_003995714.1 KEGG: hor:Hore_00950 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003995715.1 KEGG: hor:Hore_00940 CBS domain containing protein; PFAM: CBS domain containing protein; HutP family protein; SMART: CBS domain containing protein YP_003995716.1 KEGG: tit:Thit_2001 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003995717.1 KEGG: hor:Hore_00920 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003995718.1 KEGG: hor:Hore_00910 PilT protein domain protein; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc YP_003995719.1 PFAM: transcription factor CarD; KEGG: hor:Hore_00900 transcriptional regulator, CarD family YP_003995720.1 PFAM: DNA integrity scanning, DisA, linker region; protein of unknown function DUF147; helix-hairpin-helix motif; KEGG: hor:Hore_00890 DNA integrity scanning protein DisA YP_003995721.1 KEGG: hor:Hore_00870 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase YP_003995722.1 PFAM: ATP:guanido phosphotransferase; KEGG: hor:Hore_00860 arginine kinase YP_003995723.1 PFAM: UvrB/UvrC protein; KEGG: hor:Hore_00850 UvrB/UvrC protein YP_003995724.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: hor:Hore_00840 transcriptional repressor, CtsR YP_003995725.1 PFAM: protein of unknown function UPF0047; KEGG: hor:Hore_00760 hypothetical protein YP_003995726.1 KEGG: hor:Hore_00750 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_003995727.1 KEGG: hor:Hore_00740 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_003995728.1 KEGG: hor:Hore_00690 TIM-barrel protein, nifR3 family; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS YP_003995729.1 KEGG: hor:Hore_00680 pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor YP_003995730.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: tjr:TherJR_2072 2-nitropropane dioxygenase NPD YP_003995731.1 PFAM: basic membrane lipoprotein; KEGG: hor:Hore_00670 basic membrane lipoprotein YP_003995732.1 KEGG: hor:Hore_00660 biotin (acetyl-CoA carboxylase) synthetase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase YP_003995733.1 KEGG: hor:Hore_00610 signal transduction histidine kinase, LytS YP_003995734.1 KEGG: hor:Hore_00600 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS YP_003995735.1 PFAM: Conserved hypothetical protein CHP00245; KEGG: hor:Hore_15630 conserved hypothetical protein TIGR00245 YP_003995736.1 KEGG: hor:Hore_15620 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995737.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: hor:Hore_00580 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein YP_003995738.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: hor:Hore_00570 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003995739.1 KEGG: hor:Hore_00560 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein YP_003995740.1 PFAM: Ppx/GppA phosphatase; KEGG: hor:Hore_00540 exopolyphosphatase YP_003995741.1 PFAM: protein of unknown function DUF501; KEGG: hor:Hore_00530 hypothetical protein YP_003995742.1 PFAM: RNA binding S1 domain protein; KEGG: hor:Hore_00520 RNA binding S1 domain protein YP_003995743.1 PFAM: Integrase catalytic region; KEGG: cth:Cthe_3182 integrase catalytic subunit YP_003995744.1 KEGG: hor:Hore_00510 RNA binding S1 domain protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_003995745.1 PFAM: Septum formation initiator; KEGG: hor:Hore_00500 septum formation initiator YP_003995746.1 KEGG: hor:Hore_15270 hypothetical protein YP_003995747.1 KEGG: amt:Amet_1831 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA YP_003995748.1 KEGG: amt:Amet_1830 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA YP_003995749.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: amt:Amet_0985 arsenical resistance operon trans-acting repressor ArsD YP_003995750.1 KEGG: lpl:pWCFS103_10 regulator of arsenical resistance; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003995751.1 PFAM: peptidase C26; KEGG: cac:CA_C1764 glutamine amidotransferase YP_003995752.1 KEGG: hor:Hore_00450 ABC transporter related; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase YP_003995753.1 KEGG: hor:Hore_00440 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003995754.1 KEGG: hor:Hore_00430 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003995755.1 KEGG: hor:Hore_02930 hypothetical protein YP_003995756.1 KEGG: hor:Hore_00190 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995757.1 PFAM: transport system permease protein; KEGG: hor:Hore_00180 transport system permease protein YP_003995758.1 PFAM: Uncharacterised conserved protein UCP033563; KEGG: pca:Pcar_2153 hypothetical protein YP_003995759.1 KEGG: hor:Hore_11540 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein YP_003995760.1 PFAM: aminotransferase class V; KEGG: cbk:CLL_A3439 serine--glyoxylate aminotransferase YP_003995761.1 KEGG: hor:Hore_21160 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_003995762.1 KEGG: hor:Hore_21170 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_003995763.1 KEGG: hor:Hore_21180 polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein YP_003995764.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: hor:Hore_21200 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_003995765.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: hor:Hore_21210 aminoacyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003995766.1 KEGG: hor:Hore_21220 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like YP_003995767.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: hor:Hore_21230 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003995768.1 KEGG: hor:Hore_21240 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein YP_003995769.1 PFAM: SpoVG family protein; KEGG: hor:Hore_21260 SpoVG family protein YP_003995770.1 PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: hor:Hore_21270 AIR synthase related protein domain protein YP_003995771.1 KEGG: hor:Hore_21280 predicted membrane protein YP_003995772.1 TIGRFAM: glutamine synthetase, type I; KEGG: hor:Hore_21290 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003995773.1 KEGG: hor:Hore_21300 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003995774.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: hor:Hore_21360 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003995775.1 PFAM: BioY protein; KEGG: mma:MM_1036 BioY protein YP_003995776.1 KEGG: hor:Hore_21460 hypothetical protein YP_003995777.1 PFAM: PspC domain protein; KEGG: hor:Hore_21470 phage shock protein C, PspC YP_003995778.1 KEGG: amt:Amet_4658 ABC transporter, transmembrane region; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003995779.1 KEGG: hor:Hore_21540 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_003995780.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: hor:Hore_21550 phosphate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_003995781.1 KEGG: hor:Hore_21560 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_003995782.1 KEGG: hor:Hore_21570 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_003995783.1 TIGRFAM: phosphate binding protein; KEGG: hor:Hore_21580 phosphate binding protein YP_003995784.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: hor:Hore_21630 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003995785.1 KEGG: hor:Hore_21640 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_003995786.1 KEGG: hor:Hore_21650 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein YP_003995787.1 PFAM: protein of unknown function DUF1021; KEGG: hor:Hore_21690 hypothetical protein YP_003995788.1 PFAM: protein of unknown function DUF458; KEGG: hor:Hore_21710 hypothetical protein YP_003995789.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: hor:Hore_21720 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_003995790.1 PFAM: oxidoreductase domain protein; KEGG: lin:lin1972 hypothetical protein YP_003995791.1 KEGG: hor:Hore_21920 hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_003995792.1 PFAM: aminotransferase class V; KEGG: hor:Hore_22050 aminotransferase class V YP_003995793.1 KEGG: hor:Hore_22060 thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain-containing protein YP_003995794.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: tjr:TherJR_0822 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003995795.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tjr:TherJR_0821 transcriptional regulator, LysR family YP_003995796.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: hor:Hore_22180 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003995797.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: hor:Hore_22190 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein YP_003995798.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: hor:Hore_03940 excinuclease ABC C subunit domain protein YP_003995799.1 KEGG: hor:Hore_03930 rubrerythrin YP_003995800.1 PFAM: regulatory protein TetR; KEGG: pmx:PERMA_0802 transcriptional regulator YP_003995801.1 PFAM: S-layer domain-containing protein; KEGG: hor:Hore_17460 S-layer domain protein YP_003995802.1 KEGG: pfh:PFHG_02544 hypothetical protein YP_003995803.1 PFAM: protein of unknown function DUF1232; KEGG: hor:Hore_22250 protein of unknown function (DUF1232) YP_003995804.1 PFAM: NLPA lipoprotein; KEGG: hor:Hore_22280 NlpA lipoprotein YP_003995805.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hor:Hore_22290 binding-protein-dependent transport systems inner membrane component YP_003995806.1 KEGG: hor:Hore_22300 ABC transporter related; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_003995807.1 KEGG: nth:Nther_0754 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003995808.1 PFAM: permease; KEGG: drm:Dred_0548 permease YP_003995809.1 PFAM: permease; KEGG: hor:Hore_20090 permease YP_003995810.1 TIGRFAM: redox-active disulfide protein 2; KEGG: gem:GM21_1877 redox-active disulfide protein 2 YP_003995811.1 KEGG: mvn:Mevan_1194 GTP-binding protein HSR1-related; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein YP_003995812.1 PFAM: FeoA family protein; KEGG: mvn:Mevan_1191 FeoA family protein YP_003995813.1 KEGG: nth:Nther_2780 hypothetical protein YP_003995814.1 KEGG: nth:Nther_2781 hypothetical protein YP_003995815.1 KEGG: mvn:Mevan_1192 hypothetical protein YP_003995816.1 PFAM: Aconitase B; aconitate hydratase domain-containing protein; KEGG: saf:SULAZ_1512 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_003995817.1 KEGG: cac:CA_C0972 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003995818.1 KEGG: hor:Hore_22340 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_003995819.1 PFAM: protein of unknown function DUF218; KEGG: hor:Hore_22350 hypothetical protein YP_003995820.1 PFAM: protein of unknown function DUF156; KEGG: hor:Hore_13320 hypothetical protein YP_003995821.1 PFAM: aminoglycoside phosphotransferase; KEGG: cbf:CLI_2676 hypothetical protein YP_003995822.1 PFAM: Protein of unknown function DUF2064; KEGG: cbl:CLK_1999 hypothetical protein YP_003995823.1 PFAM: glycosyl transferase family 2; KEGG: cyp:PCC8801_3745 glycosyl transferase family 2 YP_003995824.1 PFAM: extracellular solute-binding protein family 5; KEGG: azl:AZL_a00980 ABC transporter periplasmic substrate-binding protein YP_003995825.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO2833 dipeptide ABC transporter, permease protein YP_003995826.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2626 binding-protein-dependent transport systems inner membrane component YP_003995827.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: cbh:CLC_2494 IunH family nucleoside hydrolase YP_003995828.1 KEGG: bse:Bsel_2866 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003995829.1 KEGG: hor:Hore_22470 hypothetical protein YP_003995830.1 PFAM: protein of unknown function DUF188; KEGG: nth:Nther_1836 protein of unknown function DUF188 YP_003995831.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: fnu:FN0213 N-acylneuraminate-9-phosphatase YP_003995832.1 KEGG: cbe:Cbei_1852 NifU family SUF system FeS assembly protein; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein YP_003995833.1 KEGG: ckr:CKR_0747 hypothetical protein; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_003995834.1 KEGG: ckr:CKR_0746 hypothetical protein; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_003995835.1 KEGG: ckr:CKR_0745 hypothetical protein; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_003995836.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: lba:Lebu_0492 FeS assembly ATPase SufC; SMART: AAA ATPase YP_003995837.1 PFAM: protein of unknown function UPF0118; KEGG: cce:Ccel_2541 protein of unknown function UPF0118 YP_003995838.1 TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; KEGG: tpd:Teth39_0907 sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit YP_003995839.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: kol:Kole_1366 biotin/lipoyl attachment domain-containing protein YP_003995840.1 PFAM: sodium pump decarboxylase gamma subunit; KEGG: pab:PAB1770 hypothetical protein YP_003995841.1 PFAM: carboxyl transferase; KEGG: nth:Nther_1489 carboxyl transferase YP_003995842.1 KEGG: chy:CHY_0800 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_003995843.1 KEGG: nth:Nther_2888 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_003995844.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sti:Sthe_3207 binding-protein-dependent transport systems inner membrane component YP_003995845.1 PFAM: extracellular solute-binding protein family 1; KEGG: rxy:Rxyl_1175 extracellular solute-binding protein YP_003995846.1 KEGG: hor:Hore_05250 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003995847.1 PFAM: protein of unknown function DUF129; KEGG: ctc:CTC01949 hypothetical protein YP_003995848.1 KEGG: bcq:BCQ_PI061 hypothetical protein YP_003995849.1 PFAM: microcompartments protein; KEGG: lsg:lse_1057 ethanolamine utilization protein YP_003995850.1 PFAM: microcompartments protein; KEGG: fnu:FN0081 ethanolamine utilization protein EutL YP_003995851.1 KEGG: ctc:CTC02175 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain YP_003995852.1 KEGG: dhd:Dhaf_4861 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit YP_003995853.1 KEGG: amt:Amet_0255 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit YP_003995854.1 PFAM: Ethanolamine utilisation EutA; KEGG: ctc:CTC02177 reactivating factor for ethanolamine ammonia lyase YP_003995855.1 PFAM: microcompartments protein; KEGG: ckr:CKR_0770 hypothetical protein YP_003995856.1 KEGG: tte:TTE1983 phosphatase/phosphohexomutase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003995857.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: sun:SUN_1119 NahC family Na(+)/H(+) antiporter YP_003995858.1 PFAM: major facilitator superfamily MFS_1; KEGG: oih:OB0724 hypothetical protein YP_003995859.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ppd:Ppro_2951 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_003995860.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: mta:Moth_1762 lipoyl synthase; PFAM: Radical SAM domain protein YP_003995861.1 TIGRFAM: lipoate-protein ligase B; KEGG: csc:Csac_0870 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_003995862.1 PFAM: nitroreductase; KEGG: bcz:pE33L466_0369 nitroreductase family protein YP_003995863.1 KEGG: ate:Athe_2106 protein of unknown function DUF362 YP_003995864.1 PFAM: aminotransferase class I and II; KEGG: bbe:BBR47_45340 transaminase YP_003995865.1 TIGRFAM: adenosylhomocysteinase; KEGG: mta:Moth_0706 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; S-adenosyl-L-homocysteine hydrolase YP_003995866.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: hor:Hore_18200 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003995867.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: pmo:Pmob_1745 xanthine/uracil/vitamin C permease YP_003995868.1 TIGRFAM: adenine deaminase; KEGG: pmo:Pmob_1744 adenine deaminase; PFAM: amidohydrolase YP_003995869.1 KEGG: pmo:Pmob_1743 dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase YP_003995870.1 PFAM: protein of unknown function DUF265; KEGG: pmo:Pmob_1742 AAA ATPase YP_003995871.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pmo:Pmob_1741 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_003995872.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: pmo:Pmob_1740 aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_003995873.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: pmo:Pmob_1739 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_003995874.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: pmo:Pmob_1738 molybdopterin dehydrogenase FAD-binding YP_003995875.1 KEGG: pmo:Pmob_1737 chlorohydrolase/aminohydrolase; TIGRFAM: selenium metabolism protein SsnA; PFAM: amidohydrolase YP_003995876.1 KEGG: pmo:Pmob_1736 amidohydrolase; PFAM: amidohydrolase YP_003995877.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: pmo:Pmob_1735 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_003995878.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: pmo:Pmob_1733 molybdopterin dehydrogenase FAD-binding YP_003995879.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: pmo:Pmob_1732 xanthine dehydrogenase YP_003995880.1 KEGG: tai:Taci_0425 aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003995881.1 KEGG: cbl:CLK_2276 peptidase; TIGRFAM: M20/DapE family protein YgeY; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003995882.1 KEGG: mta:Moth_2004 MerR family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003995883.1 KEGG: pmo:Pmob_1728 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003995884.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aco:Amico_0198 pyridoxal-5'-phosphate-dependent protein beta subunit YP_003995885.1 PFAM: OsmC family protein; KEGG: dtu:Dtur_1272 OsmC family protein YP_003995886.1 PFAM: protein of unknown function DUF134; KEGG: hor:Hore_18270 predicted DNA-binding protein YP_003995887.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: hor:Hore_21000 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003995888.1 KEGG: cpf:CPF_0803 hypothetical protein YP_003995889.1 PFAM: class II aldolase/adducin family protein; KEGG: tpd:Teth39_0876 L-fuculose phosphate aldolase YP_003995890.1 PFAM: Acetamidase/Formamidase; KEGG: bbe:BBR47_52900 hypothetical protein YP_003995891.1 PFAM: major facilitator superfamily MFS_1; KEGG: nth:Nther_0686 major facilitator superfamily MFS_1 YP_003995892.1 KEGG: lba:Lebu_0008 hypothetical protein YP_003995893.1 KEGG: nph:NP1336A hypothetical protein YP_003995894.1 PFAM: O-antigen polymerase; KEGG: hor:Hore_18850 O-antigen polymerase YP_003995895.1 KEGG: tau:Tola_0023 hypothetical protein YP_003995896.1 PFAM: glycosyl transferase group 1; KEGG: dsa:Desal_2046 glycosyl transferase group 1 YP_003995897.1 PFAM: glycosyl transferase family 2; KEGG: hor:Hore_18870 glycosyl transferase family 2 YP_003995898.1 PFAM: glycosyl transferase family 9; KEGG: hor:Hore_18880 lipopolysaccharide heptosyltransferase III YP_003995899.1 PFAM: glycosyl transferase family 9; KEGG: hor:Hore_18890 3-deoxy-D-manno-octulosonic-acid transferase domain protein YP_003995900.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; KEGG: hor:Hore_18890 3-deoxy-D-manno-octulosonic-acid transferase domain protein YP_003995901.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: hor:Hore_18900 lipid A biosynthesis lauroyl acyltransferase YP_003995902.1 SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: hor:Hore_18910 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_003995903.1 KEGG: hor:Hore_18920 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003995904.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: hor:Hore_18930 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_003995905.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: hor:Hore_18940 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_003995906.1 PFAM: protein of unknown function DUF374; KEGG: hor:Hore_18950 hypothetical protein YP_003995907.1 KEGG: hor:Hore_18960 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003995908.1 PFAM: HutP family protein; KEGG: hor:Hore_18970 HutP family protein YP_003995909.1 PFAM: periplasmic binding protein; KEGG: hor:Hore_18990 periplasmic binding protein YP_003995910.1 TIGRFAM: NAD+ synthetase; KEGG: hor:Hore_19030 NH(3)-dependent NAD(+) synthetase YP_003995911.1 KEGG: hor:Hore_19040 serine/threonine protein kinase YP_003995912.1 PFAM: phosphoglucose isomerase (PGI); KEGG: hor:Hore_19060 glucose-6-phosphate isomerase YP_003995913.1 KEGG: hor:Hore_14720 hypothetical protein YP_003995914.1 KEGG: hor:Hore_14710 hypothetical protein YP_003995915.1 PFAM: extracellular solute-binding protein family 5; KEGG: dps:DP1176 oligopeptide ABC transporter, oligopeptide-binding protein YP_003995916.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_1130 oligopeptide/dipeptide ABC transporter, permease protein YP_003995917.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gym:GYMC10_1304 binding-protein-dependent transport systems inner membrane component YP_003995918.1 PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: fpl:Ferp_1979 desulfoferrodoxin ferrous iron-binding region YP_003995919.1 KEGG: cdl:CDR20291_2023 GTP-binding protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_003995920.1 KEGG: hor:Hore_05400 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003995921.1 KEGG: hor:Hore_05400 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003995922.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: pmo:Pmob_1207 tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain YP_003995923.1 KEGG: pmo:Pmob_1208 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003995924.1 KEGG: pmo:Pmob_1209 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_003995925.1 KEGG: pmo:Pmob_1210 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_003995926.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: pmo:Pmob_1211 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_003995927.1 KEGG: pmo:Pmob_1212 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_003995928.1 KEGG: sul:SYO3AOP1_1246 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_003995929.1 PFAM: zinc/iron permease; KEGG: amt:Amet_4265 zinc/iron permease YP_003995930.1 PFAM: zinc/iron permease; KEGG: amt:Amet_4265 zinc/iron permease YP_003995931.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: tjr:TherJR_0633 iron-containing alcohol dehydrogenase YP_003995932.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: bse:Bsel_2056 glycoside hydrolase family 65 central catalytic YP_003995933.1 KEGG: tmt:Tmath_0918 haloacid dehalogenase domain protein hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003995934.1 KEGG: hor:Hore_19110 GAF domain-containing protein YP_003995935.1 PFAM: protein of unknown function DUF340 membrane; KEGG: hor:Hore_07210 predicted membrane protein YP_003995936.1 PFAM: alanine racemase domain protein; KEGG: hor:Hore_19150 alanine racemase domain protein YP_003995937.1 PFAM: heat shock protein Hsp20; KEGG: hor:Hore_19240 heat shock protein HSP20 YP_003995938.1 KEGG: hor:Hore_03380 peptidase S16 lon domain protein YP_003995939.1 PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; KEGG: cbf:CLI_3476 redox-sensing transcriptional repressor REX YP_003995940.1 PFAM: amidohydrolase; KEGG: pmo:Pmob_1730 dihydropyrimidinase YP_003995941.1 KEGG: nth:Nther_0327 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995942.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: geo:Geob_1629 binding-protein-dependent transport systems inner membrane component YP_003995943.1 PFAM: extracellular solute-binding protein family 1; KEGG: hvo:HVO_1888 ABC-type transport system periplasmic substrate-binding protein (probable substrate sulfate/tungstate) YP_003995944.1 KEGG: ate:Athe_0165 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003995945.1 KEGG: hau:Haur_4797 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003995946.1 PFAM: extracellular solute-binding protein family 1; KEGG: hor:Hore_20870 extracellular solute-binding protein family 1 YP_003995947.1 PFAM: Integrase catalytic region; KEGG: cth:Cthe_3182 integrase catalytic subunit YP_003995948.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dae:Dtox_1802 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003995949.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: paa:Paes_0565 TonB-dependent receptor YP_003995950.1 KEGG: nth:Nther_2615 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995951.1 PFAM: transport system permease protein; KEGG: nth:Nther_2616 transport system permease protein YP_003995952.1 PFAM: periplasmic binding protein; KEGG: nth:Nther_2617 periplasmic binding protein YP_003995953.1 KEGG: mmh:Mmah_0121 hypothetical protein YP_003995954.1 KEGG: cac:CA_C1384 cobalamin synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS YP_003995955.1 KEGG: tte:TTE0381 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein YP_003995956.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: pth:PTH_0931 NaMN:DMB phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003995957.1 PFAM: aminotransferase class I and II; KEGG: tjr:TherJR_1312 L-threonine-O-3-phosphate decarboxylase YP_003995958.1 PFAM: GHMP kinase; KEGG: mta:Moth_1103 GHMP kinase YP_003995959.1 KEGG: cbt:CLH_2662 cobalamin biosynthesis protein; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_003995960.1 KEGG: dae:Dtox_3091 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_003995961.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: amt:Amet_0075 cobalamin (vitamin B12) biosynthesis CbiG protein YP_003995962.1 KEGG: tmt:Tmath_0429 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK YP_003995963.1 KEGG: tit:Thit_0358 precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003995964.1 TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: amt:Amet_0074 precorrin-4 C11-methyltransferase; PFAM: anaerobic cobalt chelatase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003995965.1 KEGG: tjr:TherJR_1568 precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003995966.1 TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: dae:Dtox_1292 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit YP_003995967.1 KEGG: cobalt-precorrin-6Y C(5)-methyltransferase; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003995968.1 KEGG: amt:Amet_0070 cobalt-precorrin-6A synthase; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein YP_003995969.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: gme:Gmet_0477 precorrin-8X methylmutase YP_003995970.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: taf:THA_1039 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_003995971.1 KEGG: tjr:TherJR_1307 cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_003995972.1 KEGG: dae:Dtox_3093 cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_003995973.1 PFAM: Phosphoglycerate mutase; KEGG: dth:DICTH_1487 phosphoglycerate mutase/fructose-2,6-bisphosphatase YP_003995974.1 PFAM: formylmethanofuran dehydrogenase subunit E region; Uncharacterised protein family UPF0066; KEGG: afu:AF0433 hypothetical protein YP_003995975.1 KEGG: apo:Arcpr_1063 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995976.1 PFAM: transport system permease protein; KEGG: hut:Huta_1822 transport system permease protein YP_003995977.1 PFAM: periplasmic binding protein; KEGG: trq:TRQ2_0759 periplasmic binding protein YP_003995978.1 PFAM: NikR nickel binding; KEGG: sat:SYN_00477 nickel-responsive regulator YP_003995979.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cce:Ccel_2205 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_003995980.1 KEGG: clj:CLJU_c26710 hypothetical protein YP_003995981.1 KEGG: cdl:CDR20291_0851 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003995982.1 PFAM: peptidase S58 DmpA; KEGG: tte:TTE1796 L-aminopeptidase/D-esterase YP_003995983.1 KEGG: hor:Hore_19340 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_003995984.1 KEGG: hor:Hore_19940 threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003995985.1 PFAM: branched-chain amino acid transport; KEGG: tit:Thit_0286 branched-chain amino acid transport YP_003995986.1 PFAM: AzlC family protein; KEGG: drm:Dred_2568 AzlC family protein YP_003995987.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gym:GYMC10_0414 binding-protein-dependent transport systems inner membrane component YP_003995988.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0397 peptide ABC transporter permease YP_003995989.1 PFAM: extracellular solute-binding protein family 5; KEGG: nth:Nther_2405 extracellular solute-binding protein family 5 YP_003995990.1 PFAM: peptidase C26; KEGG: fma:FMG_0210 glutamine amidotransferase YP_003995991.1 PFAM: protein of unknown function DUF182; KEGG: nth:Nther_2211 protein of unknown function DUF182 YP_003995992.1 KEGG: mta:Moth_2006 sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis YP_003995993.1 KEGG: pmo:Pmob_1749 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003995994.1 PFAM: transport system permease protein; KEGG: pmo:Pmob_1748 transport system permease protein YP_003995995.1 PFAM: periplasmic binding protein; KEGG: pmo:Pmob_1747 periplasmic binding protein YP_003995996.1 PFAM: regulatory protein LysR; KEGG: mta:Moth_0066 ModE family transcriptional regulator YP_003995997.1 KEGG: pmo:Pmob_1746 hypothetical protein YP_003995998.1 KEGG: pmo:Pmob_1139 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003995999.1 KEGG: hor:Hore_05400 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003996000.1 KEGG: tye:THEYE_A0505 anaerobic ribonucleoside-triphosphate reductase YP_003996001.1 KEGG: hor:Hore_11040 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein YP_003996002.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; KEGG: hor:Hore_11050 anaerobic ribonucleoside triphosphate reductase; SMART: Hedgehog/intein hint domain protein YP_003996003.1 PFAM: protein of unknown function DUF445; KEGG: cbe:Cbei_0504 hypothetical protein YP_003996004.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; KEGG: mta:Moth_0689 PAS/PAC sensor protein; SMART: GGDEF domain containing protein YP_003996005.1 KEGG: hor:Hore_04060 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003996006.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_003996007.1 KEGG: tva:TVAG_291510 ankyrin repeat protein YP_003996008.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: hor:Hore_22090 IMP cyclohydrolase;phosphoribosylaminoimidazolecarboxamide formyltransferase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_003996009.1 KEGG: slp:Slip_0604 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_003996010.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: gem:GM21_1817 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003996011.1 KEGG: hor:Hore_22120 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_003996012.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: bts:Btus_0815 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003996013.1 PFAM: fumarate lyase; Adenylosuccinate lyase domain-containing protein; KEGG: hor:Hore_22170 adenylosuccinate lyase YP_003996014.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: tnp:Tnap_0228 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_003996015.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: amt:Amet_0916 phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003996016.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: hor:Hore_23090 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_003996018.1 KEGG: sat:SYN_01932 glucose/sorbosone dehydrogenase YP_003996019.1 PFAM: YibE/F family protein; KEGG: aco:Amico_1697 YibE/F family protein YP_003996020.1 KEGG: aco:Amico_1698 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase YP_003996021.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: cac:CA_C3514 reverse transcriptase/maturase family protein YP_003996022.1 KEGG: aoe:Clos_1079 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_003996023.1 KEGG: nmr:Nmar_0249 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003996024.1 KEGG: tai:Taci_0209 methyl-accepting chemotaxis sensory transducer; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3 YP_003996025.1 KEGG: tex:Teth514_1007 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like YP_003996026.1 KEGG: ckr:CKR_1196 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_003996027.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: llc:LACR_1328 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_003996028.1 KEGG: tte:TTE2135 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_003996029.1 KEGG: tte:TTE2136 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_003996030.1 KEGG: pfu:PF1665 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003996031.1 TIGRFAM: histidinol dehydrogenase; KEGG: cbt:CLH_2630 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003996032.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: bpf:BpOF4_05385 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region YP_003996033.1 TIGRFAM: histidyl-tRNA synthetase 2; KEGG: cth:Cthe_2880 ATP phosphoribosyltransferase regulatory subunit; PFAM: tRNA synthetase class II (G H P and S) YP_003996034.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: histidinol phosphate phosphatase HisJ family; KEGG: amt:Amet_3162 HisJ family histidinol phosphate phosphatase; PFAM: PHP domain protein YP_003996035.1 KEGG: hje:HacjB3_11730 trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase YP_003996036.1 KEGG: dge:Dgeo_0059 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_003996037.1 KEGG: apo:Arcpr_0376 Zn-dependent hydrolase of the beta-lactamase fold-like protein YP_003996038.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_57310 ABC transporter permease protein YP_003996039.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_57320 ABC transporter permease protein YP_003996040.1 PFAM: extracellular solute-binding protein family 1; KEGG: bbe:BBR47_57330 probable glycerol-3-phosphate ABC transporter substrate binding protein YP_003996041.1 KEGG: str:Sterm_2144 nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein YP_003996042.1 PFAM: major facilitator superfamily MFS_1; KEGG: nth:Nther_2806 major facilitator superfamily MFS_1 YP_003996043.1 PFAM: Patatin; KEGG: saf:SULAZ_1087 patatin YP_003996044.1 PFAM: Silent information regulator protein Sir2; KEGG: nam:NAMH_0804 NAD-dependent deacetylase YP_003996045.1 KEGG: bld:BLi01654 hypothetical protein; TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_003996046.1 KEGG: str:Sterm_2334 hypothetical protein YP_003996047.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: pth:PTH_0510 alcohol dehydrogenase YP_003996048.1 KEGG: bpf:BpOF4_09115 magnesium (Mg2+) transporter; TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein YP_003996049.1 KEGG: tte:TTE1820 phosphotransferase system, HPr-related proteins; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003996050.1 KEGG: hor:Hore_05080 lipoate-protein ligase; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoate protein ligase-like YP_003996051.1 KEGG: tte:TTE0189 hypothetical protein YP_003996052.1 PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: cbf:CLI_3597 PTS system, glucitol/sorbitol-specific, IIA component YP_003996053.1 KEGG: bha:BH0772 PTS system, glucitol/sorbitol-specific enzyme II, BC component (EIIBC-GUT); PFAM: Sorbitol phosphotransferase protein II domain-containing protein YP_003996054.1 KEGG: bha:BH0771 PTS system, glucitol/sorbitol-specific enzyme II, C2 component (permease); TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor YP_003996055.1 PFAM: Glucitol operon activator; KEGG: bha:BH0770 hypothetical protein YP_003996056.1 PFAM: sugar-binding domain-containing protein; regulatory protein MarR; KEGG: str:Sterm_3767 transcriptional regulator, DeoR family YP_003996057.1 PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: tte:TTE0188 dihydrolipoamide acyltransferase YP_003996058.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: str:Sterm_3771 transketolase central region YP_003996059.1 KEGG: bha:BH0776 acetoin dehydrogenase (TPP-dependent) alpha chain; PFAM: dehydrogenase E1 component YP_003996060.1 PFAM: SAF domain protein; dihydrodipicolinate reductase; KEGG: str:Sterm_3777 SAF domain protein YP_003996061.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: amt:Amet_0967 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; metal-dependent phosphohydrolase HD region YP_003996062.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain-containing protein; KEGG: nph:NP1854A 5'-nucleotidase 1; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1; UDP-sugar hydrolase 1 YP_003996063.1 KEGG: dsy:DSY1534 hypothetical protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein YP_003996064.1 KEGG: hor:Hore_03250 glycerone kinase; PFAM: Dak kinase YP_003996065.1 KEGG: aoe:Clos_1183 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003996066.1 KEGG: cce:Ccel_1858 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein YP_003996067.1 PFAM: Methyltransferase type 11; KEGG: bse:Bsel_0363 methyltransferase type 11 YP_003996068.1 PFAM: SNARE associated Golgi protein; KEGG: bse:Bsel_3278 SNARE associated Golgi protein-related protein YP_003996069.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bse:Bsel_3280 protein of unknown function DUF224 cysteine-rich region domain protein YP_003996070.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bse:Bsel_3281 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003996071.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: cno:NT01CX_0311 YeeE/YedE family protein YP_003996072.1 PFAM: SirA-like domain-containing protein; KEGG: tmt:Tmath_0136 SirA family protein YP_003996073.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: tex:Teth514_0045 protein of unknown function DUF395, YeeE/YedE YP_003996074.1 KEGG: dhd:Dhaf_4574 transcriptional regulator, CdaR YP_003996075.1 KEGG: srm:SRM_01185 thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003996076.1 PFAM: Integrase catalytic region; KEGG: tjr:TherJR_2621 integrase catalytic region YP_003996077.1 PFAM: Ferritin Dps family protein; KEGG: amt:Amet_3466 ferritin, Dps family protein YP_003996078.1 KEGG: ana:all3985 two-component hybrid sensor and regulator YP_003996079.1 PFAM: Integrase catalytic region; KEGG: cth:Cthe_3182 integrase catalytic subunit YP_003996080.1 KEGG: cyt:cce_2441 hypothetical protein YP_003996081.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: plm:Plim_3624 endonuclease/exonuclease/phosphatase YP_003996082.1 PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911 YP_003996083.1 KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region YP_003996084.1 manually curated; TIGRFAM: transcriptional regulator, AbrB family; KEGG: hor:Hore_05890 transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein YP_003996085.1 PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase YP_003996086.1 PFAM: Integrase catalytic region; KEGG: aoe:Clos_0736 integrase catalytic region YP_003996087.1 KEGG: bha:BH2915 intracellular proteinase inhibitor YP_003996088.1 PFAM: protein of unknown function UPF0047; KEGG: nth:Nther_2728 protein of unknown function UPF0047 YP_003996089.1 PFAM: MgtC/SapB transporter; KEGG: amt:Amet_1243 MgtC/SapB transporter YP_003996090.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dtu:Dtur_0210 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein YP_003996091.1 KEGG: nth:Nther_0618 hypothetical protein YP_003996092.1 KEGG: hor:Hore_20820 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein YP_003996093.1 PFAM: Methyltransferase type 11; KEGG: pat:Patl_4209 ubiquinone/menaquinone biosynthesis methyltransferases YP_003996094.1 KEGG: mpe:MYPE1560 cytoskeletal protein YP_003996095.1 KEGG: pmy:Pmen_0276 hypothetical protein YP_003996096.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bse:Bsel_3032 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003996097.1 KEGG: str:Sterm_2611 hypothetical protein YP_003996098.1 KEGG: hor:Hore_08400 glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2 YP_003996099.1 KEGG: mei:Msip34_2033 hypothetical protein YP_003996100.1 PFAM: membrane protein of unknown function; KEGG: ana:alr2746 hypothetical protein YP_003996101.1 KEGG: hor:Hore_23060 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003996102.1 TIGRFAM: serine O-acetyltransferase; KEGG: hor:Hore_23070 serine O-acetyltransferase YP_003996103.1 KEGG: dhd:Dhaf_0667 sec-C motif domain protein YP_003996104.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: hor:Hore_23090 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_003996105.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: hor:Hore_23100 adenylosuccinate synthase; PFAM: adenylosuccinate synthetase YP_003996106.1 KEGG: hor:Hore_23110 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like YP_003996107.1 KEGG: hor:Hore_23120 primosome, DnaD subunit YP_003996108.1 KEGG: hor:Hore_23130 AAA ATPase; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_003996109.1 PFAM: DnaB domain protein helicase domain protein; KEGG: hor:Hore_23140 DnaB domain protein helicase domain protein YP_003996110.1 KEGG: hor:Hore_23150 hypothetical protein YP_003996111.1 PFAM: PspC domain protein; KEGG: dhd:Dhaf_1233 phage shock protein C, PspC YP_003996112.1 KEGG: par:Psyc_1585 hypothetical protein YP_003996113.1 KEGG: hor:Hore_23210 hypothetical protein YP_003996114.1 KEGG: hor:Hore_23220 sigma E regulatory protein, MucB/RseB YP_003996115.1 PFAM: protein of unknown function DUF214; KEGG: hor:Hore_23230 ABC-type transport system, involved in lipoprotein release, permease component YP_003996116.1 PFAM: protein of unknown function DUF214; KEGG: hor:Hore_23240 ABC-type transport system, involved in lipoprotein release, permease component YP_003996117.1 KEGG: hor:Hore_23250 ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_003996118.1 KEGG: hor:Hore_23280 transcriptional regulator, TetR family YP_003996119.1 PFAM: YolD-like protein; KEGG: hor:Hore_08390 YolD-like protein YP_003996120.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: oih:OB3261 oxidoreductase YP_003996121.1 PFAM: UspA domain-containing protein; KEGG: afw:Anae109_2436 UspA domain-containing protein YP_003996122.1 KEGG: hor:Hore_04570 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003996123.1 PFAM: Auxin Efflux Carrier; KEGG: tpd:Teth39_0593 auxin efflux carrier YP_003996124.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: str:Sterm_4046 short-chain dehydrogenase/reductase SDR YP_003996125.1 TIGRFAM: mannonate dehydratase; KEGG: bld:BLi02116 mannonate dehydratase; PFAM: Mannonate dehydratase YP_003996126.1 KEGG: hor:Hore_23320 ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_003996127.1 PFAM: Protein of unknown function DUF2232, membrane; KEGG: hor:Hore_23330 predicted membrane protein YP_003996128.1 KEGG: ere:EUBREC_3263 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_003996129.1 KEGG: hor:Hore_23350 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003996130.1 KEGG: dau:Daud_2216 ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_003996131.1 KEGG: bld:BLi03881 YwoA; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003996132.1 KEGG: hor:Hore_23370 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_003996133.1 PFAM: protein of unknown function DUF951; KEGG: tmt:Tmath_2267 protein of unknown function DUF951 YP_003996134.1 KEGG: hor:Hore_23400 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein YP_003996135.1 KEGG: hor:Hore_23410 glycine dehydrogenase subunit 2 YP_003996136.1 KEGG: hor:Hore_23420 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein-like YP_003996137.1 KEGG: chy:CHY_0490 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_003996138.1 KEGG: hor:Hore_23440 glycine cleavage system T protein; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_003996139.1 PFAM: protein of unknown function DUF554; KEGG: hor:Hore_23500 uncharacterized membrane protein, possible Na+ channel or pump YP_003996140.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: hor:Hore_23510 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003996141.1 KEGG: tjr:TherJR_3009 cobyrinic acid ac-diamide synthase YP_003996142.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: hor:Hore_23530 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003996143.1 KEGG: hor:Hore_23540 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_003996144.1 KEGG: hor:Hore_23550 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_003996145.1 KEGG: hor:Hore_23560 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_003996146.1 KEGG: hor:Hore_23570 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein YP_003996147.1 KEGG: hor:Hore_23580 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_003996148.1 KEGG: hor:Hore_23590 conserved hypothetical protein TIGR00278; manually curated; PFAM: protein of unknown function DUF37 YP_003996149.1 KEGG: bay:RBAM_038150 ribonuclease P; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein