-- dump date 20120504_145919 -- class Genbank::CDS -- table cds_note -- id note YP_002507759.1 PFAM: Bacterial dnaA protein helix-turn-helix domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_002507760.1 PFAM: DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; DNA polymerase III beta subunit, C-terminal domain; TIGRFAM: DNA polymerase III, beta subunit YP_002507761.1 PFAM: S4 domain; TIGRFAM: S4 domain protein YaaA YP_002507762.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_002507764.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B subunit, carboxyl terminus; DNA gyrase B; Toprim domain; TIGRFAM: DNA gyrase, B subunit YP_002507765.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase C-terminal domain, beta-propeller; DNA gyrase C-terminal domain, beta-propeller; DNA gyrase C-terminal domain, beta-propeller; DNA gyrase C-terminal domain, beta-propeller; DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit YP_002507768.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_002507769.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_002507770.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_002507771.1 PFAM: 4Fe-4S binding domain YP_002507772.1 PFAM: Glucose inhibited division protein A; FAD dependent oxidoreductase YP_002507775.1 PFAM: ZIP Zinc transporter YP_002507776.1 PFAM: FecCD transport family YP_002507777.1 PFAM: ABC transporter YP_002507779.1 PFAM: Prophage maintenance system killer protein; TIGRFAM: death-on-curing family protein YP_002507780.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: putative addiction module antidote YP_002507782.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_002507785.1 PFAM: Transposase YP_002507786.1 PFAM: Integrase core domain YP_002507787.1 PFAM: CAAX amino terminal protease family YP_002507790.1 PFAM: Acetyltransferase (GNAT) family YP_002507791.1 PFAM: ABC-2 type transporter YP_002507793.1 PFAM: Uncharacterized protein family (UPF0180) YP_002507794.1 PFAM: Bacterial extracellular solute-binding protein YP_002507795.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002507796.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002507797.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002507798.1 PFAM: Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65, C-terminal domain YP_002507799.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; beta-phosphoglucomutase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_002507800.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Sigma-54, DNA binding domain; Bacterial regulatory proteins, lacI family YP_002507801.1 PFAM: TOBE domain; TOBE domain; ABC transporter YP_002507802.1 PFAM: YabP family; TIGRFAM: sporulation protein YabP YP_002507804.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_002507805.1 TIGRFAM: spore cortex biosynthesis protein YabQ YP_002507806.1 PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL YP_002507807.1 PFAM: S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_002507808.1 PFAM: S1 RNA binding domain YP_002507809.1 PFAM: Protein of unknown function (DUF501) YP_002507810.1 PFAM: Ppx/GppA phosphatase family YP_002507811.1 PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E YP_002507812.1 PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthetase, C-terminal domain YP_002507813.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_002507814.1 PFAM: ATPase family associated with various cellular activities (AAA); Peptidase family M41; FtsH Extracellular; TIGRFAM: ATP-dependent metalloprotease FtsH YP_002507815.1 PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily YP_002507816.1 PFAM: Formate--tetrahydrofolate ligase YP_002507818.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit YP_002507819.1 PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain; Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain; FAD dependent oxidoreductase; TIGRFAM: L-aspartate oxidase YP_002507820.1 PFAM: Quinolinate phosphoribosyl transferase, N-terminal domain; Quinolinate phosphoribosyl transferase, C-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_002507821.1 PFAM: PDZ domain (Also known as DHR or GLGF); Trypsin YP_002507822.1 PFAM: Biotin protein ligase C terminal domain; HTH domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_002507823.1 PFAM: Basic membrane protein YP_002507824.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: transcriptional activator, putative, Baf family YP_002507825.1 PFAM: Dihydrouridine synthase (Dus); Dihydroorotate dehydrogenase; TIGRFAM: putative TIM-barrel protein, nifR3 family YP_002507826.1 PFAM: Mur ligase middle domain; Mur ligase family, catalytic domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases YP_002507829.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Polysaccharide biosynthesis protein; Shikimate / quinate 5-dehydrogenase YP_002507830.1 PFAM: Prokaryotic transcription elongation factor, GreA/GreB, N-terminal domain; Prokaryotic transcription elongation factor, GreA/GreB, C-terminal domain; TIGRFAM: transcription elongation factor GreA YP_002507831.1 PFAM: OB-fold nucleic acid binding domain; tRNA synthetases class II (D, K and N); TIGRFAM: lysyl-tRNA synthetase-related protein GenX; lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_002507832.1 PFAM: Uncharacterized protein family UPF0047; TIGRFAM: conserved hypothetical protein TIGR00149 YP_002507833.1 PFAM: ROK family YP_002507834.1 PFAM: Bacterial extracellular solute-binding protein YP_002507835.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002507836.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002507837.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_002507840.1 PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR) YP_002507841.1 PFAM: UvrB/uvrC motif YP_002507842.1 PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain YP_002507843.1 PFAM: UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA); Clp amino terminal domain; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA) YP_002507844.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002507845.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair YP_002507846.1 PFAM: CarD-like/TRCF domain YP_002507847.1 PFAM: PIN domain; TRAM domain YP_002507848.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002507849.1 PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_002507850.1 PFAM: HutP; CBS domain pair YP_002507851.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002507852.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; tRNA synthetases class I (M); TIGRFAM: cysteinyl-tRNA synthetase YP_002507853.1 PFAM: RNase3 domain YP_002507854.1 PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent YP_002507855.1 PFAM: RNA 2'-O ribose methyltransferase substrate binding; SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 3 YP_002507856.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_002507857.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002507858.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_002507859.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_002507860.1 PFAM: Domain of unknown function (DUF1967); Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG YP_002507861.1 PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, RNA binding domain; TIGRFAM: 50S ribosomal protein L11 YP_002507862.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_002507863.1 PFAM: Ribosomal protein L10 YP_002507864.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_002507865.1 PFAM: RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_002507866.1 PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_002507867.1 PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family YP_002507868.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_002507869.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_002507870.1 PFAM: Elongation factor G C-terminus; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_002507871.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002507872.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_002507873.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002507874.1 PFAM: Ribosomal protein L4/L1 family YP_002507875.1 PFAM: Ribosomal protein L23 YP_002507876.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002507877.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_002507878.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002507879.1 PFAM: Ribosomal protein S3, C-terminal domain; KH domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, eukaryotic/archaeal type; ribosomal protein S3, bacterial type YP_002507880.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002507881.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_002507882.1 PFAM: Ribosomal protein S17 YP_002507883.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_002507884.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_002507885.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_002507886.1 PFAM: Ribosomal protein S14p/S29e YP_002507887.1 PFAM: Ribosomal protein S8 YP_002507888.1 PFAM: Ribosomal protein L6; Ribosomal protein L6 YP_002507889.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_002507890.1 PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_002507891.1 PFAM: Ribosomal protein L15; Ribosomal protein L15 amino terminal region; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_002507892.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_002507893.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases YP_002507894.1 PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_002507896.1 PFAM: Translation initiation factor 1A / IF-1; S1 RNA binding domain; TIGRFAM: translation initiation factor IF-1 YP_002507897.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type YP_002507898.1 PFAM: Ribosomal protein S13/S18 YP_002507899.1 PFAM: Ribosomal protein S11 YP_002507900.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_002507901.1 PFAM: RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; RNA polymerase Rpb3/Rpb11 dimerisation domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_002507902.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_002507903.1 PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit YP_002507904.1 PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit YP_002507905.1 PFAM: Cobalt transport protein YP_002507906.1 PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_002507907.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002507908.1 PFAM: Ribosomal protein S9/S16 YP_002507909.1 PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase YP_002507910.1 PFAM: AMMECR1; TIGRFAM: conserved hypothetical protein TIGR00296 YP_002507911.1 PFAM: Radical SAM superfamily YP_002507913.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_002507914.1 PFAM: Glutamine amidotransferases class-II; SIS domain; SIS domain; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_002507915.1 PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1 YP_002507916.1 TIGRFAM: trehalose synthase-fused probable maltokinase YP_002507917.1 PFAM: Glycosyl transferases group 1; TIGRFAM: glycogen synthase, Corynebacterium family YP_002507918.1 PFAM: Accessory gene regulator B YP_002507920.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002507921.1 PFAM: LytTr DNA-binding domain; Response regulator receiver domain YP_002507923.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: holo-[acyl-carrier-protein] synthase; phosphopantethiene--protein transferase domain YP_002507924.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related YP_002507925.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_002507926.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_002507927.1 PFAM: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase YP_002507928.1 PFAM: DbpA RNA binding domain; TIGRFAM: DNA helicase, putative YP_002507931.1 PFAM: PemK-like protein YP_002507932.1 PFAM: L-asparaginase II YP_002507933.1 PFAM: Amidohydrolase family; Amidohydrolase family YP_002507934.1 PFAM: Putative Fe-S cluster; PAS fold; PAS fold; Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 4Fe-4S binding domain; TIGRFAM: PAS domain S-box YP_002507935.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_002507936.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_002507937.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; 4Fe-4S binding domain; 4Fe-4S binding domain YP_002507938.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only YP_002507939.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_002507940.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_002507941.1 PFAM: Cupin domain; Helix-turn-helix YP_002507942.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_002507944.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_002507945.1 PFAM: DNA alkylation repair enzyme YP_002507946.1 PFAM: Integral membrane protein DUF125; Rubrerythrin YP_002507947.1 PFAM: ACT domain; Prephenate dehydratase YP_002507948.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_002507949.1 PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase YP_002507950.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_002507951.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; TIGRFAM: pyrroline-5-carboxylate reductase YP_002507952.1 PFAM: Uncharacterized P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein YP_002507953.1 PFAM: Glycoprotease family YP_002507954.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_002507955.1 PFAM: Glycoprotease family; TIGRFAM: metalloendopeptidase, putative, glycoprotease family YP_002507956.1 PFAM: Radical SAM superfamily YP_002507957.1 PFAM: Chaperonin 10 Kd subunit YP_002507958.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_002507959.1 PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_002507960.1 PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD YP_002507961.1 PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; conserved hypothetical protein TIGR00341 YP_002507962.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; 4Fe-4S binding domain; Iron only hydrogenase large subunit, C-terminal domain; TIGRFAM: PAS domain S-box YP_002507963.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_002507965.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 4Fe-4S binding domain YP_002507966.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002507967.1 PFAM: Iron-containing alcohol dehydrogenase; Aldehyde dehydrogenase family YP_002507968.1 catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite YP_002507969.1 PFAM: 4Fe-4S binding domain; TIGRFAM: adenosine phosphosulphate reductase, beta subunit YP_002507971.1 PFAM: Thi4 family; HI0933-like protein; FAD binding domain; Pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; Lycopene cyclase protein YP_002507972.1 PFAM: HhH-GPD superfamily base excision DNA repair protein YP_002507974.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_002507975.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase YP_002507976.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_002507977.1 PFAM: Imidazoleglycerol-phosphate dehydratase YP_002507978.1 PFAM: CobB/CobQ-like glutamine amidotransferase domain; Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_002507979.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_002507980.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_002507981.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase YP_002507984.1 PFAM: Domain of unknown function DUF123 YP_002507985.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA YP_002507986.1 PFAM: BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase C4 zinc finger domain; NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; TIGRFAM: DNA ligase, NAD-dependent YP_002507988.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit YP_002507989.1 PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit YP_002507990.1 PFAM: PET112 family, C terminal region; GatB domain; PET112 family, N terminal region; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit YP_002507994.1 PFAM: ABC transporter YP_002507995.1 PFAM: Bacterial regulatory protein, arsR family YP_002507996.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; Rhodanese-like domain; SirA-like protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_002507997.1 PFAM: Alpha amylase, catalytic domain YP_002507998.1 PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit YP_002507999.1 PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit YP_002508000.1 PFAM: Cobalt transport protein YP_002508001.1 PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_002508002.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002508003.1 PFAM: Ribosomal protein S9/S16 YP_002508004.1 PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase YP_002508005.1 PFAM: AMMECR1; TIGRFAM: conserved hypothetical protein TIGR00296 YP_002508006.1 PFAM: Radical SAM superfamily YP_002508008.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_002508009.1 PFAM: Outer membrane efflux protein YP_002508010.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_002508011.1 PFAM: ABC transporter YP_002508012.1 PFAM: Predicted permease YP_002508013.1 PFAM: Predicted permease YP_002508015.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_002508016.1 PFAM: Domain of unknown function DUF; Domain of unknown function DUF YP_002508020.1 PFAM: Uncharacterized protein family (UPF0157) YP_002508021.1 PFAM: Aldo/keto reductase family; TIGRFAM: voltage-dependent potassium channel beta subunit, animal YP_002508022.1 PFAM: LysM domain YP_002508023.1 PFAM: Glycosyl hydrolases family 16; Fibronectin type III domain; Carbohydrate binding module (family 6) YP_002508025.1 PFAM: Iron dependent repressor, N-terminal DNA binding domain; Iron dependent repressor, metal binding and dimerisation domain YP_002508026.1 PFAM: Nucleoside recognition; Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition YP_002508027.1 PFAM: Ferrous iron transport protein B; GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain YP_002508028.1 PFAM: FeoA domain YP_002508029.1 PFAM: CAAX amino terminal protease family YP_002508030.1 PFAM: OsmC-like protein YP_002508031.1 PFAM: HTH domain; Sugar-specific transcriptional regulator TrmB; Bacterial regulatory protein, arsR family YP_002508032.1 PFAM: Protein of unknown function (DUF1648) YP_002508033.1 PFAM: CAAX amino terminal protease family YP_002508035.1 PFAM: ABC transporter YP_002508038.1 PFAM: Semialdehyde dehydrogenase, NAD binding domain; Dihydrodipicolinate reductase, N-terminus; Semialdehyde dehydrogenase, dimerisation domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_002508039.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_002508040.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_002508041.1 PFAM: Beta-eliminating lyase; Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases YP_002508043.1 PFAM: 4Fe-4S binding domain; Iron only hydrogenase large subunit, C-terminal domain YP_002508044.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_002508045.1 PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; MGS-like domain; RimK-like ATP-grasp domain; ATP-grasp domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; ATP-grasp domain; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase; carbamoyl-phosphate synthase, large subunit YP_002508046.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_002508047.1 PFAM: Acetyltransferase (GNAT) family YP_002508048.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_002508050.1 PFAM: Membrane transport protein YP_002508051.1 PFAM: Sigma-54 interaction domain; TIGRFAM: PAS domain S-box YP_002508052.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_002508053.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit YP_002508054.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only YP_002508055.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002508056.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_002508058.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain YP_002508060.1 TIGRFAM: putative regulatory protein, FmdB family YP_002508061.1 PFAM: Protein of unknown function (DUF523) YP_002508062.1 PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme YP_002508063.1 TIGRFAM: germination protein YpeB YP_002508064.1 PFAM: Domain of unknown function (DUF362); 4Fe-4S binding domain; 4Fe-4S binding domain YP_002508065.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family YP_002508066.1 PFAM: Protein of unknown function (DUF964) YP_002508067.1 PFAM: NifU-like domain YP_002508070.1 PFAM: PHP domain; OB-fold nucleic acid binding domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_002508071.1 PFAM: Lyase; TIGRFAM: aspartate ammonia-lyase YP_002508072.1 PFAM: Putative small multi-drug export protein YP_002508073.1 tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination YP_002508075.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_002508076.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_002508077.1 PFAM: ATP-NAD kinase; Phosphofructokinase; TIGRFAM: 6-phosphofructokinase YP_002508078.1 PFAM: PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; Pyruvate kinase, barrel domain; TIGRFAM: pyruvate kinase YP_002508079.1 PFAM: DeoR-like helix-turn-helix domain; HTH domain; Iron dependent repressor, N-terminal DNA binding domain; Bacterial regulatory proteins, deoR family YP_002508080.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_002508081.1 PFAM: Dak1 domain YP_002508082.1 PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit YP_002508083.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B YP_002508084.1 PFAM: Transaldolase; TIGRFAM: transaldolase, putative, TalC family YP_002508085.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_002508086.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508087.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508088.1 PFAM: ABC transporter; TOBE domain YP_002508089.1 PFAM: TOBE domain; ABC transporter; TOBE domain YP_002508090.1 PFAM: Bacterial extracellular solute-binding protein YP_002508091.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain YP_002508092.1 PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106 YP_002508093.1 PFAM: S-layer homology domain; S-layer homology domain; S-layer homology domain YP_002508094.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease YP_002508096.1 PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic YP_002508097.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA polymerase LigD, polymerase domain; DNA ligase D YP_002508098.1 PFAM: ATP dependent DNA ligase domain; TIGRFAM: DNA polymerase LigD, ligase domain YP_002508100.1 PFAM: Protein of unknown function DUF114 YP_002508106.1 PFAM: Clp protease YP_002508118.1 PFAM: Phage integrase family YP_002508119.1 PFAM: Bacterial transcription activator, effector binding domain YP_002508123.1 PFAM: Glycosyl hydrolases family 31 YP_002508124.1 PFAM: Sodium Bile acid symporter family YP_002508125.1 PFAM: ABC-2 type transporter YP_002508126.1 PFAM: ABC-2 type transporter; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_002508127.1 PFAM: ABC transporter YP_002508128.1 PFAM: Bacterial regulatory proteins, tetR family YP_002508129.1 PFAM: Bacterial regulatory proteins, tetR family YP_002508131.1 PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF YP_002508132.1 PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA YP_002508133.1 PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB YP_002508134.1 PFAM: Cytochrome C assembly protein YP_002508135.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_002508136.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002508137.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_002508138.1 PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation peptidase superfamily; hydrogenase maturation protease YP_002508139.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA) YP_002508140.1 PFAM: Nickel-dependent hydrogenase YP_002508141.1 PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA YP_002508142.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB YP_002508143.1 PFAM: yrdC domain; Acylphosphatase; HypF finger; HypF finger; TIGRFAM: [NiFe] hydrogenase maturation protein HypF YP_002508144.1 PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF YP_002508145.1 PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD YP_002508146.1 PFAM: AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE YP_002508147.1 PFAM: Rubrerythrin YP_002508148.1 PFAM: GIY-YIG catalytic domain YP_002508149.1 PFAM: Aldo/keto reductase family YP_002508150.1 PFAM: Manganese containing catalase; Rubrerythrin YP_002508151.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002508154.1 PFAM: FMN-binding domain YP_002508155.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_002508156.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: exonuclease SbcD YP_002508157.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: exonuclease SbcC YP_002508158.1 PFAM: MarR family; Iron dependent repressor, N-terminal DNA binding domain YP_002508159.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_002508160.1 PFAM: UTRA domain; HTH domain; Bacterial regulatory proteins, gntR family YP_002508161.1 PFAM: Chromate transporter YP_002508162.1 PFAM: Chromate transporter YP_002508164.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal YP_002508165.1 PFAM: Radical SAM superfamily YP_002508167.1 PFAM: UvrD/REP helicase; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase YP_002508168.1 PFAM: Carboxypeptidase Taq (M32) metallopeptidase YP_002508169.1 PFAM: Fibronectin type III domain; Glycosyl hydrolase family 81; Fibronectin type III domain YP_002508171.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_002508172.1 PFAM: O-Glycosyl hydrolase family 30 YP_002508173.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002508174.1 PFAM: Glycosyl hydrolases family 16 YP_002508175.1 PFAM: Autotransporter beta-domain YP_002508177.1 PFAM: Carbohydrate binding domain; Glycosyl hydrolases family 16; Carbohydrate binding domain YP_002508178.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002508180.1 PFAM: Bacterial extracellular solute-binding protein YP_002508181.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508182.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508184.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain YP_002508185.1 PFAM: Radical SAM superfamily YP_002508186.1 PFAM: Radical SAM superfamily YP_002508187.1 PFAM: ABC transporter YP_002508190.1 PFAM: Uncharacterized protein, DegV family COG1307; TIGRFAM: degV family protein YP_002508191.1 PFAM: Bacterial regulatory proteins, tetR family YP_002508194.1 PFAM: Radical SAM superfamily YP_002508196.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam) YP_002508197.1 PFAM: N-6 DNA Methylase; TIGRFAM: type I restriction system adenine methylase (hsdM) YP_002508198.1 PFAM: Type I restriction modification DNA specificity domain; Type I restriction modification DNA specificity domain YP_002508199.1 PFAM: Type III restriction enzyme, res subunit; Type I restriction enzyme R protein N terminus (HSDR_N); TIGRFAM: type I site-specific deoxyribonuclease, HsdR family YP_002508200.1 PFAM: Protein of unknown function DUF45 YP_002508201.1 PFAM: Integrase core domain YP_002508202.1 PFAM: Transposase YP_002508203.1 PFAM: OB-fold nucleic acid binding domain; Staphylococcal nuclease homologue YP_002508204.1 PFAM: Bacterial regulatory proteins, gntR family YP_002508205.1 PFAM: ABC transporter YP_002508209.1 PFAM: HIT domain YP_002508210.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002508211.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_002508212.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508213.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508214.1 PFAM: Bacterial extracellular solute-binding protein YP_002508215.1 PFAM: ADP-ribosylglycohydrolase YP_002508216.1 PFAM: ADP-ribosylglycohydrolase YP_002508217.1 PFAM: ADP-ribosylglycohydrolase YP_002508218.1 PFAM: ADP-ribosylglycohydrolase YP_002508219.1 PFAM: Acetyltransferase (GNAT) family; Cytidylyltransferase; Citrate lyase ligase C-terminal domain; TIGRFAM: cytidyltransferase-related domain; [citrate (pro-3S)-lyase] ligase YP_002508220.1 PFAM: Citrate lyase, gamma subunit; TIGRFAM: citrate lyase acyl carrier protein YP_002508221.1 PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: citrate lyase, beta subunit YP_002508222.1 PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit YP_002508223.1 PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; ATP:dephospho-CoA triphosphoribosyl transferase YP_002508224.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_002508225.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002508226.1 PFAM: ABC transporter YP_002508228.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_002508229.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain YP_002508230.1 PFAM: alpha/beta hydrolase fold YP_002508232.1 PFAM: OsmC-like protein YP_002508233.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain; Cache domain YP_002508234.1 PFAM: Sugar (and other) transporter; Major Facilitator Superfamily YP_002508235.1 PFAM: Glycosyl hydrolase family 1 YP_002508236.1 PFAM: MatE; MviN-like protein; MatE; TIGRFAM: putative efflux protein, MATE family YP_002508237.1 PFAM: LysM domain; Peptidase family M23; LysM domain YP_002508238.1 PFAM: Heavy-metal-associated domain; E1-E2 ATPase; haloacid dehalogenase-like hydrolase; Heavy-metal-associated domain; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; copper-(or silver)-translocating P-type ATPase YP_002508239.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I YP_002508240.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_002508241.1 PFAM: Domain of unknown function DUF; TIGRFAM: putative sporulation protein YtaF YP_002508242.1 PFAM: Dephospho-CoA kinase; MGS-like domain; TIGRFAM: methylglyoxal synthase; dephospho-CoA kinase YP_002508243.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002508244.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508245.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508246.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_002508247.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_002508250.1 PFAM: Permease family YP_002508251.1 PFAM: Protein of unknown function (DUF1722); Protein of unknown function (DUF523) YP_002508252.1 PFAM: DNA photolyase; FAD binding domain of DNA photolyase; TIGRFAM: photolyase PhrII YP_002508254.1 PFAM: Radical SAM superfamily YP_002508255.1 PFAM: Bacterial regulatory proteins, tetR family YP_002508256.1 PFAM: Outer membrane efflux protein; Outer membrane efflux protein YP_002508257.1 PFAM: HlyD family secretion protein; Biotin-requiring enzyme; TIGRFAM: RND family efflux transporter, MFP subunit YP_002508258.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_002508259.1 PFAM: FeoA domain YP_002508260.1 PFAM: GTPase of unknown function; Ferrous iron transport protein B C terminus; Nucleoside recognition; Nucleoside recognition; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain; ferrous iron transporter FeoB YP_002508261.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase YP_002508262.1 PFAM: Rubrerythrin YP_002508263.1 PFAM: haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA YP_002508264.1 PFAM: DNA methylase YP_002508265.1 PFAM: Amino acid permease YP_002508267.1 PFAM: SCP-like extracellular protein; Bacterial SH3 domain; TIGRFAM: uncharacterized protein, YkwD family YP_002508268.1 PFAM: Protein of unknown function (DUF1284) YP_002508269.1 PFAM: BioY family YP_002508270.1 PFAM: Subtilase family YP_002508272.1 PFAM: MatE; MatE; TIGRFAM: putative efflux protein, MATE family YP_002508273.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_002508275.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_002508278.1 PFAM: Uncharacterized protein, DegV family COG1307; TIGRFAM: degV family protein YP_002508279.1 PFAM: Mechanosensitive ion channel YP_002508281.1 PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain; Pyruvate ferredoxin/flavodoxin oxidoreductase YP_002508282.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family YP_002508283.1 PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain YP_002508284.1 PFAM: FAD binding domain; FAD binding domain; FAD dependent oxidoreductase; Flavin containing amine oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; HI0933-like protein YP_002508286.1 PFAM: Acetyltransferase (GNAT) family YP_002508287.1 PFAM: Protein of unknown function (DUF421) YP_002508290.1 PFAM: Bacterial regulatory proteins, tetR family YP_002508291.1 PFAM: Coat F domain YP_002508293.1 PFAM: 'Cold-shock' DNA-binding domain YP_002508294.1 PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily YP_002508295.1 PFAM: Protein of unknown function (DUF421) YP_002508296.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_002508297.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_002508298.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_002508299.1 PFAM: Major Facilitator Superfamily; Sugar (and other) transporter YP_002508300.1 PFAM: DbpA RNA binding domain; Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_002508301.1 PFAM: 'Cold-shock' DNA-binding domain YP_002508302.1 PFAM: MerR family regulatory protein; Trm112p-like protein YP_002508303.1 PFAM: Major Facilitator Superfamily YP_002508304.1 PFAM: PAP2 superfamily YP_002508305.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_002508307.1 PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC YP_002508308.1 PFAM: Protein of unknown function (DUF445); Protein of unknown function (DUF445) YP_002508310.1 PFAM: TGS domain; Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase YP_002508311.1 PFAM: Translation initiation factor IF-3, N-terminal domain; Translation initiation factor IF-3, C-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_002508312.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_002508313.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_002508314.1 PFAM: RNA 2'-O ribose methyltransferase substrate binding; SpoU rRNA Methylase family YP_002508315.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_002508316.1 PFAM: Putative tRNA binding domain; Ferredoxin-fold anticodon binding domain; tRNA synthetase B5 domain; B3/4 domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_002508318.1 PFAM: Colicin V production protein YP_002508319.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family YP_002508320.1 PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein YP_002508321.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_002508322.1 PFAM: tRNA synthetases class I (W and Y); S4 domain; TIGRFAM: tyrosyl-tRNA synthetase YP_002508323.1 TIGRFAM: sporulation protein YunB YP_002508324.1 PFAM: PRC-barrel domain; PRC-barrel domain YP_002508326.1 PFAM: Domain of unknown function DUF20 YP_002508327.1 PFAM: tRNA synthetases class II (A); DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; TIGRFAM: alanyl-tRNA synthetase YP_002508328.1 PFAM: Bacterial protein of unknown function (DUF965) YP_002508330.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_002508332.1 PFAM: Uncharacterized protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250 YP_002508334.1 PFAM: Aminodeoxychorismate lyase; TIGRFAM: conserved hypothetical protein TIGR00247 YP_002508335.1 PFAM: O-methyltransferase; Methyltransferase domain YP_002508336.1 PFAM: Peptidase family U32 YP_002508338.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-K factor; RNA polymerase sigma factor, sigma-70 family YP_002508339.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; HAD-superfamily hydrolase, subfamily IIIA YP_002508340.1 PFAM: Cell Wall Hydrolase; Putative peptidoglycan binding domain; TIGRFAM: spore cortex-lytic enzyme YP_002508341.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_002508342.1 PFAM: Ferric uptake regulator family YP_002508343.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain YP_002508344.1 PFAM: Ferrous iron transport protein B C terminus; Nucleoside recognition; Nucleoside recognition; Ferrous iron transport protein B YP_002508345.1 PFAM: FeoA domain YP_002508346.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_002508347.1 PFAM: Integral membrane protein DUF6; Integral membrane protein DUF6 YP_002508348.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_002508349.1 PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E; type IV-A pilus assembly ATPase PilB YP_002508350.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_002508351.1 PFAM: Bacterial type II secretion system protein F domain; Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F YP_002508352.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_002508353.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family YP_002508355.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_002508356.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_002508357.1 TIGRFAM: type IV pilus assembly protein PilM; cell division protein FtsA YP_002508358.1 PFAM: Fimbrial assembly protein (PilN) YP_002508361.1 PFAM: Bacterial type II/III secretion system short domain; Bacterial type II/III secretion system short domain; LysM domain; LysM domain; Bacterial type II and III secretion system protein; Secretin and TonB N terminus short domain; TIGRFAM: general secretion pathway protein D YP_002508362.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002508363.1 PFAM: Shikimate kinase YP_002508364.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_002508365.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_002508366.1 PFAM: Creatinase/Prolidase N-terminal domain; metallopeptidase family M24 YP_002508367.1 PFAM: Elongation factor P (EF-P) KOW-like domain; Elongation factor P, C-terminal; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_002508368.1 PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein YP_002508369.1 TIGRFAM: stage III sporulation protein AA YP_002508370.1 TIGRFAM: stage III sporulation protein AB YP_002508371.1 PFAM: Stage III sporulation protein AC (SpoIIIAC); TIGRFAM: stage III sporulation protein AC YP_002508372.1 TIGRFAM: stage III sporulation protein AD YP_002508373.1 TIGRFAM: stage III sporulation protein AE YP_002508374.1 TIGRFAM: stage III sporulation protein AF YP_002508375.1 TIGRFAM: stage III sporulation protein AG YP_002508377.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002508378.1 PFAM: ATP-grasp domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; RimK-like ATP-grasp domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase YP_002508379.1 PFAM: Protein of unknown function (DUF322) YP_002508382.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_002508383.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit YP_002508384.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 51 Kd subunit YP_002508385.1 PFAM: Iron hydrogenase small subunit; 4Fe-4S binding domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron only hydrogenase large subunit, C-terminal domain; TIGRFAM: hydrogenases, Fe-only YP_002508386.1 PFAM: CBS domain pair YP_002508387.1 PFAM: FxsA cytoplasmic membrane protein YP_002508388.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_002508389.1 PFAM: Calcineurin-like phosphoesterase YP_002508392.1 PFAM: Subtilase family; LysM domain; LysM domain; LysM domain YP_002508393.1 PFAM: LysM domain; Cell Wall Hydrolase; LysM domain; LysM domain; LysM domain; LysM domain; LysM domain YP_002508395.1 PFAM: Putative peptidoglycan binding domain YP_002508396.1 PFAM: Polysaccharide deacetylase; LysM domain; LysM domain; LysM domain YP_002508398.1 PFAM: Oxidoreductase NAD-binding domain YP_002508399.1 PFAM: Thi4 family; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; HI0933-like protein; TIGRFAM: glutamate synthase (NADPH), homotetrameric YP_002508400.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_002508401.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_002508402.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_002508403.1 PFAM: Polyprenyl synthetase YP_002508405.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_002508406.1 PFAM: FtsJ-like methyltransferase; S4 domain; TIGRFAM: hemolysin A (tly) YP_002508407.1 PFAM: ATP-NAD kinase YP_002508408.1 PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor YP_002508409.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_002508410.1 PFAM: SpoIVB peptidase S55; PDZ domain (Also known as DHR or GLGF); TIGRFAM: stage IV sporulation protein B YP_002508411.1 PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A YP_002508412.1 PFAM: Thiamin pyrophosphokinase, catalytic domain YP_002508414.1 PFAM: Glycosyl transferase family 2 YP_002508416.1 PFAM: Sugar-specific transcriptional regulator TrmB YP_002508417.1 catalyzes the degradation of arginine to citruline and ammonia YP_002508418.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_002508419.1 PFAM: Amino acid permease; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); arginine/ornithine antiporter YP_002508420.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP YP_002508421.1 PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_002508424.1 PFAM: Sigma-54 interaction domain; TIGRFAM: PAS domain S-box YP_002508425.1 PFAM: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YP_002508426.1 PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate butyryltransferase YP_002508427.1 PFAM: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YP_002508428.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_002508429.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain YP_002508430.1 PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain; Transketolase, C-terminal domain YP_002508431.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_002508432.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase YP_002508433.1 PFAM: Peptidase dimerisation domain; M42 glutamyl aminopeptidase; Peptidase family M20/M25/M40; TIGRFAM: peptidase T-like protein YP_002508435.1 PFAM: NUDIX domain; TIGRFAM: TrgB C-terminal-related protein YP_002508436.1 TIGRFAM: conserved hypothetical protein TIGR00375 YP_002508438.1 PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M YP_002508441.1 PFAM: Thermophilic metalloprotease (M29) YP_002508442.1 PFAM: Glycosyl transferases group 1; Starch synthase catalytic domain; TIGRFAM: glycogen/starch synthases, ADP-glucose type YP_002508443.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit YP_002508444.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase YP_002508445.1 PFAM: Alpha amylase, catalytic domain; Isoamylase N-terminal domain; Alpha amylase, C-terminal all-beta domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase YP_002508446.1 PFAM: Glycosyl transferases group 1; Starch synthase catalytic domain; TIGRFAM: glycogen/starch synthases, ADP-glucose type; competence protein ComEA helix-hairpin-helix repeat region; comEA protein YP_002508447.1 PFAM: Phosphopentomutase N-terminal; Metalloenzyme superfamily; TIGRFAM: phosphopentomutase YP_002508448.1 PFAM: Phosphorylase family 2; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family YP_002508449.1 PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase YP_002508450.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_002508452.1 PFAM: STAS domain; TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor YP_002508453.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: anti-sigma F factor YP_002508454.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; Sigma-70, region 4; Sigma-70 region 3; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily YP_002508456.1 PFAM: Protein of unknown function (DUF1458) YP_002508457.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC YP_002508458.1 PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD YP_002508459.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE YP_002508460.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_002508463.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_002508465.1 PFAM: Uncharacterized protein family (UPF0236) YP_002508466.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_002508467.1 PFAM: Poly A polymerase head domain; DHHA1 domain; DHH family; CBS domain pair YP_002508468.1 PFAM: Peptidase family M50 YP_002508469.1 PFAM: ScpA/B protein YP_002508470.1 PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_002508472.1 TIGRFAM: sporulation protein YtfJ YP_002508473.1 PFAM: Membrane protein of unknown function (DUF340) YP_002508474.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_002508475.1 PFAM: S4 domain; RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase family YP_002508476.1 PFAM: Stage V sporulation protein S (SpoVS) YP_002508477.1 PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, primarily archaeal type; GTP-binding conserved hypothetical protein; chromosome segregation protein SMC, common bacterial type YP_002508478.1 PFAM: Peptidase S7, Flavivirus NS3 serine protease YP_002508479.1 PFAM: SRP54-type protein, helical bundle domain; SRP54-type protein, GTPase domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_002508480.1 PFAM: HTH DNA binding domain; Sigma-70, region 4; Sigma-70, region 4; Putative helix-turn-helix protein, YlxM / p13 like YP_002508481.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; signal recognition particle-docking protein FtsY YP_002508482.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_002508484.1 PFAM: RimM N-terminal domain; PRC-barrel domain; TIGRFAM: 16S rRNA processing protein RimM YP_002508485.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_002508487.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_002508488.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein YP_002508489.1 PFAM: Ribonuclease HII YP_002508490.1 PFAM: Protein of unknown function (DUF988) YP_002508492.1 PFAM: Uncharacterized protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252 YP_002508493.1 PFAM: ATPase family associated with various cellular activities (AAA); Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein YP_002508494.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box YP_002508495.1 PFAM: ZIP Zinc transporter YP_002508497.1 PFAM: Carbon-nitrogen hydrolase YP_002508498.1 PFAM: Carbon-nitrogen hydrolase YP_002508500.1 PFAM: B12 binding domain; Helix-turn-helix YP_002508502.1 PFAM: 4Fe-4S binding domain; Aldo/keto reductase family YP_002508504.1 PFAM: SMF family; TIGRFAM: DNA protecting protein DprA YP_002508506.1 PFAM: Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; Toprim domain; Topoisomerase DNA binding C4 zinc finger; Topoisomerase DNA binding C4 zinc finger; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase; DNA topoisomerase I, bacterial; DNA topoisomerase I, archaeal YP_002508507.1 PFAM: FAD dependent oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Glucose inhibited division protein A; TIGRFAM: gid protein YP_002508508.1 heat shock protein involved in degradation of misfolded proteins YP_002508509.1 PFAM: ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); TIGRFAM: heat shock protein HslVU, ATPase subunit HslU YP_002508510.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_002508511.1 PFAM: Response regulator receiver domain YP_002508512.1 PFAM: Signal transducing histidine kinase, homodimeric domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CheW-like domain; P2 response regulator binding domain; Hpt domain YP_002508513.1 PFAM: CheW-like domain YP_002508514.1 PFAM: CheW-like domain YP_002508515.1 PFAM: CheC-like family; CheC-like family YP_002508516.1 PFAM: CheD YP_002508517.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_002508518.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_002508519.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_002508520.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_002508522.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_002508523.1 PFAM: Cytidylyltransferase family YP_002508524.1 PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI YP_002508525.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002508526.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: membrane-associated zinc metalloprotease, putative YP_002508527.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_002508528.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_002508529.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: prolyl-tRNA synthetase, family II YP_002508530.1 PFAM: Glycosyl transferase family 2 YP_002508531.1 PFAM: ACT domain; MgtC family YP_002508532.1 PFAM: OB-fold nucleic acid binding domain; Exonuclease; Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA polymerase III, alpha chain, Gram-positive type; exonuclease, DNA polymerase III, epsilon subunit family YP_002508533.1 PFAM: Uncharacterized BCR, YhbC family COG0779 YP_002508534.1 PFAM: S1 RNA binding domain; NusA N-terminal domain; TIGRFAM: transcription termination factor NusA YP_002508535.1 PFAM: Protein of unknown function (DUF448) YP_002508536.1 PFAM: Elongation factor Tu domain 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu domain 2; GTPase of unknown function; Elongation factor Tu GTP binding domain; Translation initiation factor IF-2, N-terminal region; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein domain YP_002508537.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_002508538.1 PFAM: DHHA1 domain; DHH family YP_002508539.1 PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_002508540.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: cytidyltransferase-related domain; riboflavin kinase/FMN adenylyltransferase YP_002508541.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_002508542.1 PFAM: KH domain; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 1; S1 RNA binding domain; 3' exoribonuclease family, domain 2; 3' exoribonuclease family, domain 2; 3' exoribonuclease family, domain 1 YP_002508543.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1) YP_002508544.1 TIGRFAM: DnaQ family exonuclease/DinG family helicase, putative YP_002508545.1 PFAM: Cell Wall Hydrolase; LysM domain; LysM domain YP_002508546.1 PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_002508547.1 PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB YP_002508548.1 PFAM: Polysaccharide deacetylase; TIGRFAM: probable sporulation protein, polysaccharide deacetylase family YP_002508549.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_002508550.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family YP_002508552.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; Aluminium resistance protein YP_002508553.1 PFAM: GHMP kinases N terminal domain; GHMP kinases C terminal; TIGRFAM: homoserine kinase YP_002508554.1 PFAM: Homoserine dehydrogenase; ACT domain; Homoserine dehydrogenase, NAD binding domain YP_002508555.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_002508556.1 PFAM: Amino acid kinase family; ACT domain; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_002508557.1 in Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis YP_002508558.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isopropylmalate/isohomocitrate dehydrogenases; isocitrate dehydrogenase, NAD-dependent, mitochondrial type; isocitrate dehydrogenase, NADP-dependent, prokaryotic type YP_002508559.1 PFAM: Copper/zinc superoxide dismutase (SODC) YP_002508560.1 PFAM: Macro domain YP_002508561.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_002508562.1 PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase YP_002508563.1 PFAM: HI0933-like protein; Pyridine nucleotide-disulphide oxidoreductase; Glucose inhibited division protein A; FAD binding domain; FAD dependent oxidoreductase YP_002508564.1 PFAM: Protein of unknown function (DUF1667) YP_002508565.1 PFAM: Glycerol-3-phosphate responsive antiterminator YP_002508566.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002508568.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_002508569.1 PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F YP_002508570.1 PFAM: alpha/beta hydrolase fold YP_002508571.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: dipeptidase, putative YP_002508572.1 TIGRFAM: bacteriocin-type signal sequence YP_002508573.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_002508574.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain YP_002508575.1 PFAM: Dipeptidyl peptidase IV (DPP IV) N-terminal region; WD40-like Beta Propeller Repeat YP_002508576.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671 YP_002508577.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family YP_002508578.1 PFAM: Integral membrane protein DUF92; TIGRFAM: conserved hypothetical protein TIGR00297 YP_002508579.1 PFAM: Nucleoside recognition YP_002508580.1 PFAM: Nucleoside recognition YP_002508581.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_002508582.1 PFAM: NUDIX domain YP_002508583.1 PFAM: VanZ like family YP_002508591.1 PFAM: YolD-like protein YP_002508592.1 PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, plant type YP_002508594.1 PFAM: Acylphosphatase YP_002508595.1 PFAM: Uncharacterized protein family (UPF0236) YP_002508596.1 PFAM: Bacterial regulatory proteins, tetR family YP_002508597.1 PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family YP_002508600.1 PFAM: 4Fe-4S binding domain YP_002508601.1 PFAM: Cupin domain YP_002508603.1 PFAM: Male sterility protein; NAD dependent epimerase/dehydratase family; 3-beta hydroxysteroid dehydrogenase/isomerase family YP_002508604.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; RibD C-terminal domain; TIGRFAM: riboflavin biosynthesis protein RibD; riboflavin-specific deaminase C-terminal domain YP_002508605.1 PFAM: Lumazine binding domain; Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_002508606.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_002508607.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_002508608.1 PFAM: ABC transporter YP_002508609.1 PFAM: Uncharacterized protein family (UPF0236) YP_002508610.1 PFAM: Uncharacterized protein family (UPF0236) YP_002508611.1 PFAM: Putative RNA methylase family UPF0020 YP_002508612.1 PFAM: Amylo-alpha-1,6-glucosidase; TIGRFAM: glycogen debranching enzyme, archaeal type, putative YP_002508613.1 PFAM: Triose-phosphate Transporter family; Integral membrane protein DUF6; Integral membrane protein DUF6 YP_002508614.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases YP_002508615.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_002508616.1 catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance YP_002508617.1 involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme YP_002508618.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_002508619.1 PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class YP_002508620.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_002508621.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_002508623.1 PFAM: Clp protease YP_002508625.1 PFAM: Na+/Pi-cotransporter; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter YP_002508626.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenol kinase, putative YP_002508627.1 PFAM: FtsK/SpoIIIE family YP_002508628.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_002508629.1 PFAM: ABC transporter; ABC transporter YP_002508630.1 PFAM: Branched-chain amino acid transport system / permease component YP_002508631.1 PFAM: Branched-chain amino acid transport system / permease component YP_002508633.1 PFAM: Helix-turn-helix YP_002508634.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_002508636.1 PFAM: Type III restriction enzyme, res subunit; Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_002508637.1 PFAM: Uncharacterized protein family (UPF0236) YP_002508638.1 PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator) YP_002508639.1 PFAM: Beta-eliminating lyase; Aminotransferase class-V YP_002508640.1 PFAM: NifU-like N terminal domain YP_002508641.1 PFAM: tRNA methyl transferase; ExsB; Arginosuccinate synthase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_002508642.1 PFAM: Domain of unknown function DUF81 YP_002508643.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_002508644.1 PFAM: Mechanosensitive ion channel YP_002508646.1 PFAM: RNase H YP_002508647.1 PFAM: Ferric uptake regulator family YP_002508648.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_002508649.1 PFAM: RimK-like ATP-grasp domain; D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; ATP-grasp domain; TIGRFAM: D-alanine--D-alanine ligase YP_002508650.1 PFAM: impB/mucB/samB family YP_002508651.1 PFAM: MraZ protein; MraZ protein; TIGRFAM: mraZ protein YP_002508652.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_002508653.1 PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL YP_002508654.1 PFAM: PASTA domain; Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D YP_002508655.1 PFAM: Mur ligase middle domain; Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases YP_002508656.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_002508657.1 PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_002508658.1 PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_002508659.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; stage V sporulation protein E YP_002508660.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_002508661.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase YP_002508662.1 PFAM: POTRA domain, FtsQ-type YP_002508663.1 PFAM: Cell division protein FtsA; Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_002508664.1 PFAM: Tubulin/FtsZ family, GTPase domain; Tubulin/FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_002508665.1 PFAM: Sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA YP_002508666.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation YP_002508667.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin YP_002508668.1 TIGRFAM: stage II sporulation protein R YP_002508669.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family YP_002508670.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator, NrdR family YP_002508671.1 PFAM: Uncharacterized ACR, YfiH family COG1496; TIGRFAM: conserved hypothetical protein TIGR00726 YP_002508672.1 TIGRFAM: putative membrane fusion protein YP_002508673.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: conserved hypothetical protein TIGR00044 YP_002508674.1 PFAM: Protein of unknown function (DUF552) YP_002508675.1 PFAM: YGGT family YP_002508676.1 PFAM: S4 domain YP_002508677.1 PFAM: DivIVA protein YP_002508678.1 PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (C) catalytic domain; Anticodon-binding domain; Zinc finger found in FPG and IleRS; tRNA synthetases class I (M); TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase; isoleucyl-tRNA synthetase YP_002508679.1 PFAM: MatE; MatE; TIGRFAM: putative efflux protein, MATE family YP_002508681.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; sporulation protein, yteA family YP_002508682.1 catalyzes the formation of 2-oxobutanoate from L-threonine YP_002508683.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_002508684.1 PFAM: S4 domain; RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_002508685.1 PFAM: Uncharacterized protein family (UPF0236) YP_002508686.1 PFAM: Phosphoribosyl transferase domain YP_002508687.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_002508688.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_002508689.1 PFAM: Amidohydrolase family; Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type YP_002508690.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_002508691.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain YP_002508692.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_002508693.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein YP_002508694.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; orotate phosphoribosyltransferase, Thermus family YP_002508695.1 PFAM: Bacterial regulatory proteins, lacI family YP_002508696.1 PFAM: Major Facilitator Superfamily YP_002508697.1 PFAM: Alpha amylase, catalytic domain YP_002508699.1 PFAM: Glycosyl hydrolases family 31; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase YP_002508700.1 PFAM: Bacterial extracellular solute-binding protein YP_002508701.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508702.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508704.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002508705.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family YP_002508706.1 PFAM: ABC transporter; ABC transporter YP_002508707.1 PFAM: Branched-chain amino acid transport system / permease component YP_002508708.1 catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose YP_002508709.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_002508710.1 PFAM: RbsD / FucU transport protein family YP_002508711.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase YP_002508712.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_002508713.1 PFAM: RDD family YP_002508714.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T YP_002508715.1 PFAM: Metallo-beta-lactamase superfamily YP_002508716.1 PFAM: Membrane dipeptidase (Peptidase family M19) YP_002508717.1 PFAM: Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin family N-terminal region YP_002508718.1 PFAM: Transglycosylase; Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase; penicillin-binding protein 1C YP_002508720.1 PFAM: UV-endonuclease UvdE; TIGRFAM: UV damage endonuclease UvdE YP_002508721.1 PFAM: Alpha amylase, catalytic domain YP_002508722.1 PFAM: pfkB family carbohydrate kinase YP_002508723.1 PFAM: Calcineurin-like phosphoesterase YP_002508724.1 PFAM: Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; Elongation factor G C-terminus; Elongation factor Tu domain 2; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_002508725.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase PanE/ApbA; NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain YP_002508726.1 PFAM: B12 binding domain YP_002508727.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_002508728.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase YP_002508729.1 PFAM: Fibronectin-binding protein A N-terminus (FbpA); Domain of unknown function (DUF814) YP_002508730.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; Cation transporter/ATPase, N-terminus; Cation transporting ATPase, C-terminus; TIGRFAM: potassium and/or sodium efflux P-type ATPase, fungal-type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; plasma-membrane calcium-translocating P-type ATPase YP_002508731.1 PFAM: Domain of unknown function (DUF370) YP_002508732.1 PFAM: Guanylate kinase YP_002508733.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_002508734.1 PFAM: Flavoprotein; DNA / pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_002508735.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_002508736.1 PFAM: Uncharacterized protein family (UPF0236) YP_002508737.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase YP_002508738.1 PFAM: Uncharacterized protein family (UPF0104); TIGRFAM: conserved hypothetical protein YP_002508739.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N' YP_002508740.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_002508741.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_002508742.1 PFAM: Putative neutral zinc metallopeptidase YP_002508744.1 PFAM: NusB family; NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family putative RNA methylase; ribosomal RNA small subunit methyltransferase RsmB YP_002508745.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family YP_002508746.1 PFAM: Stage II sporulation protein E (SpoIIE); Protein phosphatase 2C YP_002508747.1 PFAM: PASTA domain; PASTA domain; Protein tyrosine kinase; Protein kinase domain; PASTA domain YP_002508748.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: GTP-binding conserved hypothetical protein; ribosome small subunit-dependent GTPase A YP_002508749.1 PFAM: Ribulose-phosphate 3 epimerase family; Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: ribulose-phosphate 3-epimerase YP_002508750.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; RibD C-terminal domain; TIGRFAM: riboflavin biosynthesis protein RibD; riboflavin-specific deaminase C-terminal domain YP_002508751.1 PFAM: Lumazine binding domain; Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_002508752.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_002508753.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_002508754.1 TIGRFAM: probable proton-coupled thiamine transporter YuaJ YP_002508755.1 PFAM: Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase YP_002508756.1 Catalyzes the reversible hydration of fumaric acid to yield I-malic acid YP_002508757.1 PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region YP_002508758.1 PFAM: Malic enzyme, N-terminal domain; Malic enzyme, NAD binding domain YP_002508759.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_002508760.1 PFAM: Protein of unknown function (DUF322) YP_002508761.1 PFAM: DAK2 domain YP_002508762.1 PFAM: Uncharacterized protein, DegV family COG1307; TIGRFAM: degV family protein YP_002508763.1 PFAM: DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent DNA helicase RecG YP_002508764.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: putative methyltransferase YP_002508765.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_002508766.1 PFAM: Nucleoside recognition; Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ YP_002508767.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_002508768.1 PFAM: Patatin-like phospholipase YP_002508769.1 PFAM: PDZ domain (Also known as DHR or GLGF) YP_002508770.1 PFAM: Protein of unknown function (DUF795) YP_002508771.1 PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase YP_002508772.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_002508773.1 PFAM: Uncharacterized ACR, COG1399 YP_002508774.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_002508775.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria YP_002508776.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX YP_002508777.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_002508778.1 PFAM: 2-nitropropane dioxygenase YP_002508779.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_002508780.1 PFAM: KR domain; short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_002508781.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_002508782.1 PFAM: Beta-ketoacyl synthase, C-terminal domain; Beta-ketoacyl synthase, N-terminal domain YP_002508783.1 PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial YP_002508785.1 PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1 YP_002508786.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; phospho-2-dehydro-3-deoxyheptonate aldolase YP_002508787.1 PFAM: Prephenate dehydrogenase YP_002508788.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_002508789.1 PFAM: Integral membrane protein DUF6; Integral membrane protein DUF6 YP_002508790.1 PFAM: Cytidylate kinase; Shikimate kinase; TIGRFAM: cytidylate kinase YP_002508791.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_002508792.1 PFAM: 5TMR of 5TMR-LYT; Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain YP_002508793.1 PFAM: LytTr DNA-binding domain; Response regulator receiver domain YP_002508794.1 PFAM: Carbon starvation protein CstA YP_002508795.1 PFAM: Hemerythrin HHE cation binding domain; Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain YP_002508796.1 PFAM: S1 RNA binding domain; S1 RNA binding domain; LytB protein; S1 RNA binding domain; S1 RNA binding domain; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); ribosomal protein S1 YP_002508797.1 PFAM: Protein of unknown function (DUF1614) YP_002508798.1 PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P YP_002508803.1 PFAM: GTPase of unknown function; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding conserved hypothetical protein YP_002508804.1 PFAM: Domain of unknown function DUF; TIGRFAM: conserved hypothetical integral membrane protein TIGR00023 YP_002508805.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase PanE/ApbA; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YP_002508806.1 TIGRFAM: stage IV sporulation protein A YP_002508807.1 PFAM: Bacterial DNA-binding protein YP_002508808.1 PFAM: TrkA-C domain; TrkA-N domain; TrkA-N domain YP_002508811.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_002508812.1 PFAM: Response regulator receiver domain YP_002508813.1 PFAM: Hsp33 protein YP_002508815.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002508817.1 PFAM: Amidohydrolase family; Amidohydrolase family YP_002508818.1 PFAM: RadC, DNA repair protein YP_002508821.1 PFAM: Uncharacterized protein family (UPF0182); TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase YP_002508822.1 PFAM: Peptidase M16 inactive domain YP_002508823.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_002508824.1 PFAM: Nucleoside H+ symporter; Major Facilitator Superfamily YP_002508825.1 PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative YP_002508826.1 PFAM: Phosphoribulokinase / Uridine kinase family YP_002508828.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_002508829.1 PFAM: Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat YP_002508830.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; D-amino acid aminotransferase YP_002508831.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_002508832.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_002508833.1 PFAM: ACT domain; TIGRFAM: acetolactate synthase, small subunit YP_002508834.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_002508835.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_002508836.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase, large subunit YP_002508837.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase, small subunit YP_002508838.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_002508839.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein YP_002508840.1 PFAM: Aminotransferase class I and II YP_002508841.1 PFAM: Domain of unknown function (DUF296) YP_002508842.1 PFAM: PhoH-like protein YP_002508843.1 PFAM: MerR family regulatory protein YP_002508844.1 PFAM: Stage II sporulation protein; Tetratricopeptide repeat; TIGRFAM: SpoIID/LytB domain YP_002508847.1 PFAM: Peptidase family M23; LysM domain; LysM domain YP_002508849.1 PFAM: Metallo-beta-lactamase superfamily YP_002508850.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_002508851.1 PFAM: LysM domain; LysM domain; Peptidase family M23; Putative peptidoglycan binding domain YP_002508852.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein YP_002508853.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates YP_002508854.1 PFAM: Radical SAM superfamily YP_002508855.1 PFAM: Protein of unknown function DUF114 YP_002508856.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_002508861.1 PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family; ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); oligopeptide transporters, OPT superfamily YP_002508862.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain YP_002508863.1 PFAM: PAP2 superfamily YP_002508864.1 PFAM: Glycosyl transferases group 1 YP_002508865.1 PFAM: Glutaredoxin YP_002508866.1 PFAM: Nitroreductase family YP_002508867.1 PFAM: Protein of unknown function (DUF861) YP_002508868.1 PFAM: Major Facilitator Superfamily YP_002508869.1 PFAM: Bacterial regulatory protein, arsR family YP_002508871.1 PFAM: Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat YP_002508873.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_002508874.1 PFAM: Protein of unknown function (DUF456) YP_002508876.1 PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein YP_002508878.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002508879.1 PFAM: LysM domain; LysM domain; LysM domain YP_002508880.1 PFAM: Protein of unknown function, DUF255; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase YP_002508881.1 PFAM: Uncharacterized protein, DegV family COG1307; TIGRFAM: degV family protein YP_002508882.1 PFAM: Lecithin:cholesterol acyltransferase; PGAP1-like protein YP_002508892.1 PFAM: Resolvase, N terminal domain YP_002508893.1 PFAM: LysM domain YP_002508894.1 PFAM: Peptidase S24-like; LexA DNA binding domain; TIGRFAM: SOS regulatory protein LexA YP_002508895.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_002508896.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002508897.1 PFAM: ABC transporter YP_002508899.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family YP_002508900.1 PFAM: Aminotransferase class-V YP_002508901.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002508902.1 PFAM: Tetratricopeptide repeat YP_002508903.1 catalyzes the formation of LL-diaminopimelate from tetrahydrodipicolinate; involved in lysine and peptidoglycan synthesis YP_002508904.1 PFAM: Diaminopimelate epimerase; Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_002508905.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_002508907.1 TIGRFAM: GTP-binding conserved hypothetical protein YP_002508908.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: stage V sporulation protein K YP_002508909.1 PFAM: TrkA-N domain; TrkA-C domain YP_002508910.1 PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA) YP_002508911.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_002508912.1 PFAM: MutS domain V; MutS domain I; MutS domain II; MutS domain III; MutS family domain IV; TIGRFAM: DNA mismatch repair protein MutS YP_002508913.1 PFAM: TRAM domain; Uncharacterized protein family UPF0004; Radical SAM superfamily; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB YP_002508914.1 PFAM: TrkA-C domain; TrkA-N domain YP_002508915.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_002508916.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_002508917.1 PFAM: Voltage gated chloride channel YP_002508919.1 PFAM: DNA gyrase B; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B subunit, carboxyl terminus; Toprim domain; TIGRFAM: DNA gyrase, B subunit YP_002508920.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; DNA gyrase C-terminal domain, beta-propeller; DNA gyrase C-terminal domain, beta-propeller; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_002508921.1 PFAM: Cell Wall Hydrolase YP_002508922.1 PFAM: S-layer homology domain YP_002508924.1 TIGRFAM: TonB family C-terminal domain YP_002508925.1 PFAM: Biopolymer transport protein ExbD/TolR YP_002508926.1 PFAM: MotA/TolQ/ExbB proton channel family YP_002508928.1 PFAM: PHP domain YP_002508929.1 PFAM: Nucleoside recognition YP_002508930.1 PFAM: Nucleoside recognition YP_002508931.1 PFAM: Stage V sporulation protein S (SpoVS) YP_002508932.1 PFAM: HD domain; KH domain; TIGRFAM: uncharacterized domain HDIG YP_002508933.1 PFAM: RecX family YP_002508934.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_002508935.1 PFAM: 2',5' RNA ligase family; 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_002508936.1 PFAM: Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat YP_002508937.1 PFAM: Competence-damaged protein; Probable molybdopterin binding domain; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; competence/damage-inducible protein CinA N-terminal domain YP_002508938.1 PFAM: ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); Peptidase family M41; TIGRFAM: ATP-dependent metalloprotease FtsH YP_002508940.1 PFAM: Phosphatidylglycerophosphatase A YP_002508941.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002508942.1 PFAM: Uncharacterized protein family UPF0004; Radical SAM superfamily; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG, TIGR01125 YP_002508944.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family YP_002508945.1 PFAM: Putative rRNA methylase; TIGRFAM: methyltransferase, FkbM family YP_002508946.1 PFAM: Uncharacterized protein family (UPF0236) YP_002508947.1 PFAM: Uncharacterized protein family UPF0029; TIGRFAM: conserved hypothetical protein TIGR00257 YP_002508948.1 PFAM: Magnesium chelatase, subunit ChlI; ATPase family associated with various cellular activities (AAA) YP_002508949.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_002508950.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_002508951.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_002508952.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_002508953.1 PFAM: Domain related to MnhB subunit of Na+/H+ antiporter YP_002508955.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit YP_002508956.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) YP_002508957.1 PFAM: Na+/H+ ion antiporter subunit YP_002508959.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_002508960.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_002508961.1 PFAM: Tetratricopeptide repeat; PPIC-type PPIASE domain YP_002508962.1 PFAM: Metallo-beta-lactamase superfamily YP_002508963.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_002508964.1 PFAM: TGS domain; HD domain; ACT domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_002508965.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_002508966.1 PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_002508968.1 PFAM: ABC1 family YP_002508970.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family YP_002508971.1 PFAM: SecD/SecF GG Motif; Protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_002508972.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_002508973.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_002508974.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylases, various specificities YP_002508975.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_002508976.1 PFAM: ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); Holliday junction DNA helicase ruvB N-terminus; Holliday junction DNA helicase ruvB C-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_002508977.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_002508978.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_002508980.1 PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033 YP_002508983.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_002508984.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486 YP_002508985.1 PFAM: Sigma-70, region 4; Sigma-70 factor, region 1.2; Sigma-70 region 2; Sigma-70 region 3; Sigma-70 factor, region 1.1; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal domain; RNA polymerase sigma factor, sigma-70 family YP_002508986.1 PFAM: CHC2 zinc finger; Toprim domain; DNA primase catalytic core, N-terminal domain; TIGRFAM: DNA primase, catalytic core YP_002508987.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; deoxyguanosinetriphosphate triphosphohydrolase, putative YP_002508988.1 PFAM: Domain of unknown function (DUF299) YP_002508989.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase; glycyl-tRNA synthetase, tetrameric type, beta subunit YP_002508990.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_002508993.1 PFAM: Recombination protein O; TIGRFAM: DNA repair protein RecO YP_002508994.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_002508995.1 PFAM: Divalent cation transporter; MgtE intracellular domain; CBS domain pair; TIGRFAM: Mg2+ transporter (mgtE) YP_002508996.1 PFAM: KH domain; GTPase of unknown function; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding conserved hypothetical protein; GTP-binding protein Era; small GTP-binding protein domain YP_002508997.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_002508999.1 PFAM: Bacterial protein of unknown function (DUF881) YP_002509000.1 PFAM: Protein of unknown function (DUF502) YP_002509001.1 PFAM: Transporter associated domain; Domain of unknown function DUF21; CBS domain pair YP_002509002.1 PFAM: Prokaryotic diacylglycerol kinase; PAP2 superfamily YP_002509003.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043 YP_002509004.1 PFAM: 7TM receptor with intracellular HD hydrolase; 7TM-HD extracellular; HD domain; TIGRFAM: uncharacterized domain HDIG YP_002509005.1 PFAM: PhoH-like protein; KH domain YP_002509006.1 PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD YP_002509007.1 PFAM: Protein of unknown function (DUF1429); TIGRFAM: sporulation protein YqfC YP_002509008.1 PFAM: Protein of unknown function (DUF421) YP_002509011.1 PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein YP_002509015.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_002509016.1 PFAM: HTH domain; DeoR-like helix-turn-helix domain; CBS domain pair YP_002509017.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002509018.1 PFAM: HD domain; HD domain; TIGRFAM: uncharacterized domain HDIG YP_002509019.1 PFAM: GatB domain YP_002509020.1 PFAM: HIT domain YP_002509021.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YP_002509022.1 PFAM: RNA methyltransferase; TIGRFAM: conserved hypothetical protein TIGR00046 YP_002509023.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; TIGRFAM: ribosomal protein L11 methyltransferase YP_002509024.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_002509025.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_002509026.1 PFAM: GrpE YP_002509027.1 PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_002509028.1 PFAM: HemN C-terminal region; Radical SAM superfamily; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_002509029.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002509030.1 PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P YP_002509031.1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination YP_002509033.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_002509034.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_002509035.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_002509036.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_002509037.1 PFAM: Metallo-beta-lactamase superfamily; Competence protein; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 YP_002509038.1 PFAM: Helix-hairpin-helix motif; TIGRFAM: comEA protein; competence protein ComEA helix-hairpin-helix repeat region YP_002509039.1 PFAM: Integral membrane protein DUF6; Integral membrane protein DUF6 YP_002509041.1 PFAM: Redoxin; AhpC/TSA family YP_002509042.1 PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase YP_002509046.1 PFAM: ABC transporter YP_002509049.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_002509050.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_002509051.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509052.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509054.1 N terminal fragment YP_002509055.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_002509056.1 PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; Glycosyl hydrolases family 2, sugar binding domain YP_002509057.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509058.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509059.1 PFAM: Bacterial extracellular solute-binding protein YP_002509060.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002509061.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_002509062.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933-like protein; Glucose inhibited division protein A; FAD binding domain YP_002509063.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509064.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509065.1 PFAM: Bacterial extracellular solute-binding protein YP_002509066.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002509067.1 PFAM: Nitroreductase family YP_002509068.1 PFAM: CAAX amino terminal protease family YP_002509069.1 PFAM: Uncharacterized ACR, COG2135 YP_002509070.1 PFAM: impB/mucB/samB family YP_002509073.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_002509074.1 PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002509076.1 PFAM: LysE type translocator YP_002509077.1 PFAM: Uncharacterized BCR, COG1937 YP_002509078.1 PFAM: Positive regulator of sigma(E), RseC/MucC YP_002509079.1 PFAM: Heavy-metal-associated domain YP_002509080.1 PFAM: Ferrous iron transport protein B C terminus; Ferrous iron transport protein B; GTPase of unknown function; Nucleoside recognition; Nucleoside recognition; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain; ferrous iron transporter FeoB YP_002509081.1 PFAM: FeoA domain YP_002509082.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; tRNA synthetases class I (M); TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_002509083.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein YP_002509084.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_002509085.1 PFAM: HD domain; TIGRFAM: conserved hypothetical protein TIGR00488; uncharacterized domain HDIG YP_002509086.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_002509089.1 PFAM: Major Facilitator Superfamily YP_002509090.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_002509091.1 PFAM: Acetyltransferase (GNAT) family YP_002509093.1 PFAM: Putative cyclase YP_002509096.1 PFAM: GTPase of unknown function; Protein of unknown function, DUF258; TIGRFAM: GTP-binding conserved hypothetical protein; ribosome small subunit-dependent GTPase A YP_002509097.1 PFAM: Acetyltransferase (GNAT) family YP_002509098.1 PFAM: Bacterial regulatory proteins, tetR family YP_002509100.1 PFAM: Choline/ethanolamine kinase; Phosphotransferase enzyme family YP_002509101.1 PFAM: Methyltransferase domain; Tellurite resistance protein TehB YP_002509102.1 PFAM: Protein of unknown function (DUF1121) YP_002509103.1 PFAM: B12 binding domain; Radical SAM superfamily YP_002509104.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002509106.1 PFAM: haloacid dehalogenase-like hydrolase YP_002509118.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_002509119.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family YP_002509120.1 PFAM: Transposase YP_002509121.1 PFAM: Integrase core domain YP_002509125.1 PFAM: CAAX amino terminal protease family YP_002509127.1 PFAM: Methyltransferase domain YP_002509128.1 PFAM: HEPN domain YP_002509129.1 PFAM: Nucleotidyltransferase domain YP_002509130.1 PFAM: Chloramphenicol acetyltransferase YP_002509133.1 PFAM: Isoamylase N-terminal domain; Alpha amylase, catalytic domain; TIGRFAM: pullulanase, type I YP_002509134.1 PFAM: LysM domain; LysM domain YP_002509136.1 TIGRFAM: DNA binding domain, excisionase family YP_002509137.1 PFAM: Carbonic anhydrase YP_002509138.1 PFAM: Amidohydrolase YP_002509141.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_002509142.1 PFAM: Carbon-nitrogen hydrolase YP_002509143.1 PFAM: Shikimate kinase YP_002509144.1 PFAM: Xylose isomerase-like TIM barrel YP_002509146.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002509147.1 PFAM: alpha/beta hydrolase fold YP_002509148.1 PFAM: Metallo-beta-lactamase superfamily; Intermediate filament tail domain YP_002509151.1 PFAM: ABC transporter; ABC transporter YP_002509152.1 PFAM: Uncharacterized protein, DegV family COG1307; TIGRFAM: degV family protein YP_002509153.1 PFAM: CRS1 / YhbY domain; TIGRFAM: conserved hypothetical protein TIGR00253 YP_002509154.1 PFAM: GTP1/OBG; Domain of unknown function (DUF1967); GTPase of unknown function; TIGRFAM: GTP-binding protein Obg/CgtA; GTP-binding conserved hypothetical protein; small GTP-binding protein domain YP_002509155.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_002509156.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_002509157.1 PFAM: S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_002509159.1 PFAM: Radical SAM superfamily YP_002509160.1 PFAM: Peptidase family M50 YP_002509161.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA YP_002509162.1 PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE YP_002509163.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD YP_002509164.1 PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC YP_002509165.1 PFAM: Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain YP_002509167.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_002509168.1 functions in MreBCD complex in some organisms YP_002509169.1 PFAM: RadC, DNA repair protein; TIGRFAM: DNA repair protein radc YP_002509170.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_002509171.1 PFAM: Heptaprenyl diphosphate synthase component I YP_002509172.1 PFAM: ApbE family YP_002509173.1 PFAM: Protein of unknown function (DUF1312) YP_002509174.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain; Putative Fe-S cluster; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit YP_002509175.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit YP_002509176.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit YP_002509177.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit YP_002509178.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit YP_002509179.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit YP_002509180.1 PFAM: Sporulation related domain YP_002509181.1 PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_002509182.1 PFAM: Divergent PAP2 family YP_002509183.1 PFAM: Poly A polymerase head domain YP_002509184.1 TIGRFAM: type IV pilus assembly protein PilM; cell division protein FtsA YP_002509185.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_002509186.1 PFAM: Alpha mannosidase, middle domain; Glycosyl hydrolase family 57; Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain YP_002509187.1 PFAM: Uncharacterized ACR (DUF711) YP_002509188.1 ACT domain-containing protein YP_002509189.1 PFAM: PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_002509190.1 PFAM: Ribosomal RNA adenine dimethylase; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_002509192.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_002509193.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_002509194.1 PFAM: Integral membrane protein DUF6; Integral membrane protein DUF6 YP_002509195.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002509196.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain YP_002509197.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509198.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509199.1 PFAM: Bacterial extracellular solute-binding protein YP_002509200.1 PFAM: Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, C-terminal domain YP_002509201.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_002509202.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_002509203.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; tRNA synthetases class I (M); TIGRFAM: valyl-tRNA synthetase YP_002509204.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002509205.1 PFAM: CS domain; Hsp20/alpha crystallin family YP_002509206.1 PFAM: Tetratricopeptide repeat YP_002509207.1 PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain YP_002509208.1 PFAM: SPFH domain / Band 7 family YP_002509209.1 PFAM: NfeD-like YP_002509210.1 PFAM: Uncharacterized protein, DegV family COG1307; TIGRFAM: degV family protein YP_002509211.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); arsenate reductase, glutathione/glutaredoxin type YP_002509213.1 PFAM: Bacterial regulatory protein, arsR family YP_002509214.1 PFAM: Bacterial regulatory proteins, tetR family YP_002509218.1 PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain YP_002509219.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509220.1 PFAM: ABC transporter YP_002509221.1 PFAM: NLPA lipoprotein YP_002509222.1 PFAM: Aminotransferase class-III YP_002509223.1 PFAM: Peptidase family U32; Peptidase family U32 YP_002509224.1 PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases YP_002509225.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase, putative YP_002509226.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases YP_002509227.1 PFAM: Polyprenyl synthetase YP_002509228.1 PFAM: ApbE family YP_002509230.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; DoxX; Pyridine nucleotide-disulphide oxidoreductase YP_002509231.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_002509233.1 PFAM: ubiE/COQ5 methyltransferase family; Methyltransferase domain; Methyltransferase domain YP_002509234.1 PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain; GTP-binding conserved hypothetical protein YP_002509235.1 PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease La YP_002509236.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; ATPase family associated with various cellular activities (AAA); Magnesium chelatase, subunit ChlI; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease LonB YP_002509237.1 PFAM: Magnesium chelatase, subunit ChlI; ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_002509238.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_002509239.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor YP_002509240.1 PFAM: Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat; Ankyrin repeat YP_002509242.1 PFAM: Peptidase family S41 YP_002509243.1 PFAM: Glycosyl transferase family 2 YP_002509245.1 PFAM: Glycosyl hydrolase family 57; Alpha mannosidase, middle domain; Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain YP_002509246.1 PFAM: NifU-like domain YP_002509247.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509248.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509249.1 PFAM: Bacterial extracellular solute-binding protein YP_002509250.1 PFAM: Bacterial regulatory proteins, gntR family; HTH domain; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002509251.1 PFAM: Major Facilitator Superfamily YP_002509252.1 PFAM: Thioredoxin; Glutaredoxin YP_002509254.1 TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif YP_002509255.1 TIGRFAM: putative CRISPR-associated protein, APE2256 family YP_002509256.1 PFAM: RAMP superfamily; S1 RNA binding domain; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family YP_002509257.1 TIGRFAM: CRISPR-associated protein, Cmr5 family YP_002509258.1 PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family YP_002509259.1 TIGRFAM: CRISPR-associated protein, Cmr3 family YP_002509260.1 TIGRFAM: CRISPR-associated protein, Crm2 family YP_002509261.1 PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family YP_002509263.1 PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4 YP_002509264.1 PFAM: Uncharacterized ACR, COG1343; TIGRFAM: CRISPR-associated protein Cas2 YP_002509265.1 PFAM: Protein of unknown function DUF48; TIGRFAM: CRISPR-associated protein Cas1 YP_002509266.1 PFAM: Helicase conserved C-terminal domain; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein YP_002509267.1 TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein Cas5, Hmari subtype YP_002509268.1 PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csh2 family YP_002509269.1 TIGRFAM: CRISPR-associated protein, TM1802 family; CRISPR-associated protein, Csh1 family; putative glutamate--cysteine ligase/putative amino acid ligase YP_002509270.1 PFAM: HTH domain YP_002509271.1 PFAM: Protein of unknown function (DUF964) YP_002509272.1 PFAM: Glycosyl hydrolase family 1 YP_002509273.1 PFAM: DnaJ domain YP_002509275.1 PFAM: ABC transporter YP_002509276.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain YP_002509277.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family YP_002509278.1 PFAM: Vitamin B12 dependent methionine synthase, activation domain YP_002509279.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_002509280.1 PFAM: B12 binding domain; B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family; methylmalonyl-CoA mutase C-terminal domain YP_002509281.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; Bacterial regulatory helix-turn-helix proteins, AraC family YP_002509282.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family YP_002509283.1 PFAM: 3' exoribonuclease family, domain 2; 3' exoribonuclease family, domain 1; TIGRFAM: ribonuclease PH YP_002509287.1 PFAM: Methylaspartate ammonia-lyase N-terminus; Methylaspartate ammonia-lyase C-terminus; TIGRFAM: methylaspartate ammonia-lyase YP_002509288.1 PFAM: Methylaspartate mutase E chain (MutE); TIGRFAM: methylaspartate mutase, E subunit YP_002509289.1 TIGRFAM: conserved hypothetical protein YP_002509290.1 converts methylaspartate to L-glutamate YP_002509291.1 PFAM: Bacterial regulatory proteins, gntR family YP_002509295.1 PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_002509296.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_002509297.1 PFAM: Protein of unknown function (DUF327) YP_002509298.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509299.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509300.1 PFAM: Bacterial extracellular solute-binding protein YP_002509301.1 PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; Glycosyl hydrolases family 2, sugar binding domain; Glycosyl hydrolases family 2, TIM barrel domain YP_002509302.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002509303.1 PFAM: Protein of unknown function (DUF503) YP_002509304.1 PFAM: Rubrerythrin YP_002509306.1 PFAM: ABC transporter YP_002509307.1 PFAM: Uncharacterized protein family (UPF0014); TIGRFAM: conserved hypothetical protein TIGR00245 YP_002509308.1 PFAM: Protein of unknown function (DUF815) YP_002509312.1 PFAM: alpha/beta hydrolase fold YP_002509316.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_002509317.1 PFAM: RNB domain; Ribonuclease B OB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases YP_002509318.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_002509319.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_002509320.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_002509321.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_002509323.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_002509324.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002509325.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_002509326.1 PFAM: Phosphoglycerate kinase YP_002509327.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_002509328.1 PFAM: Putative sugar-binding domain YP_002509329.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_002509330.1 PFAM: Uncharacterized BCR, COG1481; TIGRFAM: conserved hypothetical protein YP_002509331.1 PFAM: Uncharacterized protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related YP_002509332.1 PFAM: P-loop ATPase protein family YP_002509333.1 PFAM: Diacylglycerol kinase catalytic domain (presumed); TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU) YP_002509334.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family YP_002509336.1 PFAM: Squalene/phytoene synthase; TIGRFAM: farnesyl-diphosphate farnesyltransferase YP_002509337.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_002509338.1 PFAM: Receptor family ligand binding region YP_002509339.1 PFAM: Nitroreductase family YP_002509341.1 PFAM: Linocin_M18 bacteriocin protein YP_002509342.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Nucleotidyl transferase YP_002509343.1 PFAM: Glycosyl transferases group 1 YP_002509344.1 PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57 YP_002509346.1 PFAM: Carbohydrate binding domain (family 25) YP_002509348.1 PFAM: HPr Serine kinase C-terminus; HPr Serine kinase N terminus; TIGRFAM: Hpr(Ser) kinase/phosphatase YP_002509349.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; ROK family; TIGRFAM: ROK family protein (putative glucokinase) YP_002509351.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_002509352.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_002509353.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_002509354.1 PFAM: Radical SAM superfamily YP_002509356.1 PFAM: Sucrose-6F-phosphate phosphohydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_002509357.1 PFAM: Serine hydroxymethyltransferase; Orn/Lys/Arg decarboxylase, major domain YP_002509358.1 PFAM: lactate/malate dehydrogenase, NAD binding domain; lactate/malate dehydrogenase, alpha/beta C-terminal domain; TIGRFAM: L-lactate dehydrogenase YP_002509359.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain YP_002509360.1 PFAM: Alpha amylase, N-terminal ig-like domain; Alpha amylase, catalytic domain YP_002509361.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509362.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509363.1 PFAM: Bacterial extracellular solute-binding protein YP_002509364.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002509365.1 PFAM: GIY-YIG catalytic domain; UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; TIGRFAM: excinuclease ABC, C subunit YP_002509366.1 PFAM: ABC transporter; ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_002509367.1 PFAM: UvrB/uvrC motif; Type III restriction enzyme, res subunit; Helicase conserved C-terminal domain; TIGRFAM: excinuclease ABC, B subunit YP_002509368.1 PFAM: tRNA methyltransferase complex GCD14 subunit; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) YP_002509369.1 PFAM: NlpC/P60 family YP_002509370.1 PFAM: Putative cyclase YP_002509371.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_002509372.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_002509373.1 PFAM: GXGXG motif YP_002509374.1 PFAM: IMP dehydrogenase / GMP reductase domain; 4Fe-4S binding domain; FMN-dependent dehydrogenase; Conserved region in glutamate synthase YP_002509375.1 PFAM: Glutamine amidotransferases class-II YP_002509376.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_002509377.1 PFAM: Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit YP_002509378.1 PFAM: ACT domain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit YP_002509379.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_002509382.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized BCR, YitT family COG1284 YP_002509383.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_002509384.1 PFAM: Polysaccharide pyruvyl transferase YP_002509387.1 PFAM: Peptidyl-tRNA hydrolase domain; PCRF domain; TIGRFAM: peptide chain release factor 2 YP_002509388.1 PFAM: Helicase conserved C-terminal domain; SEC-C motif; SecA Wing and Scaffold domain; SecA preprotein cross-linking domain; SecA DEAD-like domain; TIGRFAM: preprotein translocase, SecA subunit YP_002509389.1 PFAM: Conserved region in glutamate synthase YP_002509390.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_002509391.1 PFAM: 'Cold-shock' DNA-binding domain YP_002509392.1 TIGRFAM: comF family protein YP_002509393.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_002509394.1 PFAM: Cytidylyltransferase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain YP_002509395.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I YP_002509397.1 PFAM: Sporulation related domain; Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain YP_002509399.1 PFAM: Flagellar P-ring protein YP_002509400.1 PFAM: Flagellar L-ring protein YP_002509402.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein FlgB YP_002509403.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078) YP_002509404.1 PFAM: Aminodeoxychorismate lyase YP_002509407.1 PFAM: Protein of unknown function (DUF342) YP_002509408.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; Sigma-70, region 4; Sigma-70 region 3; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor, FliA/WhiG family YP_002509410.1 PFAM: PilZ domain YP_002509411.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_002509412.1 PFAM: SRP54-type protein, GTPase domain YP_002509413.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA YP_002509414.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: type III secretion protein, YscU/HrpY family; flagellar biosynthetic protein FlhB YP_002509415.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR YP_002509416.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ YP_002509417.1 PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP YP_002509419.1 PFAM: Surface presentation of antigens (SPOA) protein; CheC-like family; CheC-like family; TIGRFAM: flagellar motor switch protein FliN YP_002509420.1 PFAM: Flagellar motor switch protein FliM; Surface presentation of antigens (SPOA) protein; TIGRFAM: flagellar motor switch protein FliM YP_002509421.1 PFAM: Flagellar basal body-associated protein FliL YP_002509422.1 PFAM: OmpA family YP_002509423.1 PFAM: MotA/TolQ/ExbB proton channel family YP_002509424.1 PFAM: Flagellar protein (FlbD) YP_002509425.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; Flagellar basal body protein FlaE; TIGRFAM: flagellar hook protein FlgE, epsilon proteobacterial YP_002509426.1 TIGRFAM: flagellar operon protein YP_002509427.1 PFAM: Flagellar hook capping protein YP_002509428.1 PFAM: Flagellar hook-length control protein YP_002509430.1 TIGRFAM: flagellar export protein FliJ YP_002509431.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: flagellar protein export ATPase FliI; type III secretion apparatus H+-transporting two-sector ATPase; ATPase FliI/YscN family YP_002509432.1 PFAM: Flagellar assembly protein FliH YP_002509433.1 PFAM: Flagellar M-ring protein C-terminal; Secretory protein of YscJ/FliF family; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) YP_002509434.1 forms a junction between the M-ring and FlgB during flagella biosynthesis YP_002509435.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC YP_002509436.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_002509437.1 PFAM: Response regulator receiver domain YP_002509438.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_002509439.1 PFAM: SAF domain; NeuB family YP_002509441.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Aminotransferase class I and II YP_002509442.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase family; short chain dehydrogenase; NAD dependent epimerase/dehydratase family; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain YP_002509443.1 PFAM: Cytidylyltransferase YP_002509444.1 PFAM: NeuB family YP_002509447.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS YP_002509448.1 PFAM: Protein of unknown function DUF115 YP_002509450.1 PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif YP_002509451.1 PFAM: FlaG protein YP_002509452.1 PFAM: Bacterial flagellin C-terminus; Bacterial flagellin N-terminus YP_002509453.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA) YP_002509454.1 PFAM: FliW protein YP_002509457.1 PFAM: Bacterial flagellin N-terminus; TIGRFAM: flagellar hook-associated protein 3 YP_002509458.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK YP_002509462.1 PFAM: Uncharacterized protein family (UPF0104); TIGRFAM: conserved hypothetical protein YP_002509463.1 PFAM: Glycosyl transferases group 1 YP_002509464.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase III, putative YP_002509466.1 PFAM: Aminotransferase class-III YP_002509468.1 PFAM: Radical SAM superfamily YP_002509469.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_002509470.1 PFAM: Protein of unknown function (DUF1657) YP_002509471.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_002509472.1 PFAM: Domain of unknown function DUF; TIGRFAM: conserved hypothetical integral membrane protein TIGR00023 YP_002509473.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_002509474.1 PFAM: FMN-dependent dehydrogenase; Conserved region in glutamate synthase YP_002509479.1 PFAM: RmlD substrate binding domain; 3-beta hydroxysteroid dehydrogenase/isomerase family; Polysaccharide biosynthesis protein; NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-4-dehydrorhamnose reductase YP_002509481.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_002509482.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_002509485.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YP_002509490.1 PFAM: S-layer homology domain YP_002509493.1 PFAM: Predicted permease YjgP/YjgQ family YP_002509494.1 PFAM: ABC transporter YP_002509495.1 PFAM: Protein of unknown function (DUF1239) YP_002509496.1 PFAM: Protein of unknown function (DUF1239) YP_002509497.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase YP_002509498.1 PFAM: Protein of unknown function (DUF1009) YP_002509499.1 PFAM: Bacterial transferase hexapeptide (three repeats); Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_002509500.1 PFAM: MaoC like domain; FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_002509501.1 PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_002509502.1 PFAM: ABC transporter YP_002509504.1 PFAM: Protein of unknown function (DUF1239); OstA-like protein YP_002509505.1 PFAM: Predicted permease YjgP/YjgQ family YP_002509506.1 PFAM: Subtilase family YP_002509508.1 PFAM: Bacterial transferase hexapeptide (three repeats); Bacterial transferase hexapeptide (three repeats); UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_002509509.1 PFAM: Outer membrane protein (OmpH-like) YP_002509511.1 PFAM: Outer membrane protein (OmpH-like) YP_002509512.1 PFAM: Surface antigen variable number repeat; Surface antigen variable number repeat; Surface antigen variable number repeat; Surface antigen YP_002509514.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002509515.1 PFAM: Family of unknown function (DUF490); YabP family YP_002509517.1 PFAM: Cell division protein FtsA; MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_002509518.1 PFAM: helix-turn-helix, Psq domain; TIGRFAM: sporulation transcriptional regulator SpoIIID YP_002509519.1 PFAM: Peptidase family M23 YP_002509520.1 PFAM: Stage II sporulation protein; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain YP_002509521.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002509522.1 PFAM: Protein of unknown function (DUF1694) YP_002509523.1 PFAM: ATP synthase, Delta/Epsilon chain, long alpha-helix domain; ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_002509524.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit YP_002509525.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_002509526.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, beta-barrel domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_002509527.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_002509528.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_002509530.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_002509531.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_002509534.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_002509535.1 PFAM: Glycosyl transferase family 4 YP_002509536.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_002509537.1 PFAM: Ribose/Galactose Isomerase; Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_002509538.1 PFAM: Domain of unknown function DUF; Domain of unknown function DUF YP_002509539.1 PFAM: SUA5 domain; yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_002509540.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); Methyltransferase small domain; Methyltransferase domain; Methyltransferase domain; TIGRFAM: HemK family putative methylases YP_002509541.1 PFAM: Peptidyl-tRNA hydrolase domain; PCRF domain; TIGRFAM: peptide chain release factor 1 YP_002509542.1 PFAM: Protein of unknown function (DUF1385) YP_002509543.1 PFAM: Thymidine kinase YP_002509544.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_002509545.1 PFAM: Rho termination factor, N-terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho YP_002509546.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist; class II aldolase, tagatose bisphosphate family YP_002509549.1 PFAM: haloacid dehalogenase-like hydrolase YP_002509550.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002509552.1 PFAM: Domain of unknown function (DUF1934) YP_002509554.1 PFAM: Uncharacterized protein family (UPF0051) YP_002509555.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC YP_002509556.1 PFAM: Thioredoxin; Redoxin; TIGRFAM: thioredoxin YP_002509557.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like domain protein YP_002509558.1 catalyzes the removal of amino acids from the N termini of peptides YP_002509560.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_002509562.1 PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain YP_002509563.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_002509564.1 PFAM: Redoxin; AhpC/TSA family; Thioredoxin YP_002509565.1 PFAM: Glycosyl transferases group 1; TIGRFAM: sucrose-phosphate synthase, putative, glycosyltransferase domain YP_002509566.1 PFAM: pfkB family carbohydrate kinase YP_002509567.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family; Bacterial regulatory proteins, lacI family YP_002509568.1 converts 1,4-alpha-D-glucans to maltodextrin YP_002509570.1 PFAM: Isoamylase N-terminal domain YP_002509571.1 PFAM: Sigma-70, region 4; Protein of unknown function DUF134 YP_002509572.1 PFAM: S-layer homology domain YP_002509573.1 catalyzes the reduction of hydroxylamine to ammonia and water YP_002509577.1 PFAM: ABC 3 transport family YP_002509578.1 PFAM: ABC transporter YP_002509579.1 PFAM: Periplasmic solute binding protein family YP_002509580.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_002509581.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain YP_002509582.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain YP_002509583.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_002509584.1 PFAM: Metallo-beta-lactamase superfamily YP_002509585.1 PFAM: Sodium:neurotransmitter symporter family YP_002509586.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_002509587.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509588.1 PFAM: ABC transporter; CBS domain pair; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit YP_002509591.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_002509592.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: translation initiation factor, putative, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized proteins YP_002509593.1 PFAM: MatE; MatE; TIGRFAM: putative efflux protein, MATE family YP_002509594.1 TIGRFAM: pentatricopeptide repeat domain (PPR motif) YP_002509599.1 PFAM: Putative peptidoglycan binding domain YP_002509605.1 PFAM: RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; RHS Repeat; Putative peptidoglycan binding domain; RHS Repeat; TIGRFAM: YD repeat (two copies) YP_002509606.1 PFAM: Bacterial type II and III secretion system protein; Secretin and TonB N terminus short domain; Bacterial type II/III secretion system short domain YP_002509608.1 PFAM: Fimbrial assembly protein (PilN) YP_002509609.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_002509610.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_002509611.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_002509612.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain YP_002509613.1 PFAM: Bacterial type II secretion system protein F domain; Bacterial type II secretion system protein F domain YP_002509614.1 PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E YP_002509617.1 converts 1,4-alpha-D-glucans to maltodextrin YP_002509618.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_002509619.1 PFAM: ABC transporter YP_002509620.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_002509621.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_002509622.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_002509623.1 PFAM: FMN-binding domain YP_002509624.1 PFAM: GtrA-like protein YP_002509625.1 PFAM: PAP2 superfamily YP_002509626.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_002509629.1 PFAM: O-Antigen Polymerase YP_002509630.1 PFAM: Glycosyl transferase family 2 YP_002509631.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase III, putative YP_002509632.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II YP_002509633.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_002509634.1 PFAM: CBS domain pair; SIS domain; TIGRFAM: KpsF/GutQ family protein YP_002509635.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase YP_002509636.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_002509637.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_002509638.1 PFAM: Domain of unknown function (DUF374) YP_002509639.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_002509640.1 PFAM: HutP YP_002509641.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_002509642.1 PFAM: Periplasmic binding protein YP_002509644.1 PFAM: Protein of unknown function DUF58 YP_002509645.1 PFAM: ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA) YP_002509646.1 PFAM: NAD synthase; ExsB; tRNA methyl transferase; TIGRFAM: NAD+ synthetase YP_002509647.1 PFAM: Protein kinase domain YP_002509648.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain YP_002509649.1 catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate YP_002509651.1 PFAM: Rubrerythrin; Rubredoxin YP_002509652.1 PFAM: Glycosyl hydrolases family 31; TIGRFAM: phage head-tail adaptor, putative, SPP1 family YP_002509653.1 PFAM: AsnC family; M protein trans-acting positive regulator (MGA) HTH domain YP_002509656.1 PFAM: Na+/H+ antiporter family YP_002509657.1 PFAM: Alanine racemase, N-terminal domain YP_002509658.1 catalyzes the formation of biotin from dethiobiotin and sulfur YP_002509659.1 PFAM: Acetyltransferase (GNAT) family YP_002509660.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_002509661.1 PFAM: Bacterial regulatory proteins, lacI family YP_002509663.1 PFAM: NAD dependent epimerase/dehydratase family; short chain dehydrogenase YP_002509664.1 catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin YP_002509665.1 PFAM: PHP domain YP_002509666.1 PFAM: Hsp20/alpha crystallin family YP_002509667.1 PFAM: Bacterial protein of unknown function (DUF894); Major Facilitator Superfamily YP_002509668.1 PFAM: Subtilase family YP_002509670.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002509671.1 PFAM: ABC transporter YP_002509672.1 PFAM: ABC transporter transmembrane region YP_002509673.1 PFAM: GTPase of unknown function; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein Era; GTP-binding conserved hypothetical protein; small GTP-binding protein domain YP_002509674.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain YP_002509676.1 PFAM: PhoU family; PhoU family; TIGRFAM: phosphate transport system regulatory protein PhoU YP_002509677.1 TIGRFAM: alpha-glucan phosphorylases YP_002509680.1 PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D YP_002509681.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex YP_002509682.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex YP_002509683.1 PFAM: ATP synthase (E/31 kDa) subunit YP_002509684.1 PFAM: ATP synthase (F/14-kDa) subunit YP_002509685.1 PFAM: ATP synthase subunit C YP_002509686.1 PFAM: V-type ATPase 116kDa subunit family YP_002509687.1 PFAM: ATP synthase (C/AC39) subunit YP_002509689.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain YP_002509690.1 PFAM: Branched-chain amino acid transport system / permease component YP_002509691.1 PFAM: ABC transporter; ABC transporter YP_002509692.1 TIGRFAM: D-xylose ABC transporter, substrate-binding protein YP_002509693.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase YP_002509694.1 PFAM: Xylose isomerase-like TIM barrel YP_002509695.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase YP_002509696.1 PFAM: HTH domain; Bacterial regulatory protein, arsR family; Sugar-specific transcriptional regulator TrmB; ROK family; MarR family YP_002509697.1 PFAM: Isoamylase N-terminal domain; Alpha amylase, catalytic domain; Bacterial pullanase-associated domain; TIGRFAM: pullulanase, type I; pullulanase, extracellular, Gram-positive YP_002509698.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase YP_002509699.1 PFAM: Beta-eliminating lyase; DegT/DnrJ/EryC1/StrS aminotransferase family; Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; O-succinylhomoserine sulfhydrylase YP_002509700.1 PFAM: Methylenetetrahydrofolate reductase YP_002509701.1 PFAM: Pterin binding enzyme; B12 binding domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; 5-methyltetrahydrofolate--homocysteine methyltransferase YP_002509704.1 PFAM: Surface antigen; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase YP_002509708.1 PFAM: Predicted permease YP_002509709.1 PFAM: ABC transporter YP_002509711.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002509712.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002509715.1 PFAM: ABC transporter YP_002509716.1 PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_002509717.1 PFAM: Glycosyltransferase 36 associated family; Putative carbohydrate binding domain; Glycosyltransferase family 36 YP_002509718.1 PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family YP_002509719.1 PFAM: Bacterial extracellular solute-binding protein YP_002509720.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509721.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509722.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002509723.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_002509727.1 PFAM: Cache domain; Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; HAMP domain YP_002509728.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family YP_002509729.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509730.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509731.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain YP_002509732.1 PFAM: Bacterial extracellular solute-binding protein YP_002509733.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; Bacterial regulatory helix-turn-helix proteins, AraC family YP_002509735.1 TIGRFAM: flhB C-terminus-related protein YP_002509736.1 PFAM: Aminotransferase class-V; Aminotransferase class I and II; Beta-eliminating lyase YP_002509738.1 PFAM: pfkB family carbohydrate kinase YP_002509739.1 PFAM: ABC transporter YP_002509740.1 PFAM: Branched-chain amino acid transport system / permease component YP_002509741.1 PFAM: ABC transporter substrate binding protein YP_002509743.1 PFAM: Aminotransferase class-V YP_002509745.1 PFAM: PHP domain YP_002509746.1 PFAM: Uncharacterized protein family (UPF0153) YP_002509749.1 PFAM: Bacterial regulatory proteins, tetR family YP_002509750.1 TIGRFAM: small redox-active disulfide protein 2 YP_002509751.1 PFAM: Predicted permease YP_002509752.1 PFAM: MarR family; Bacterial regulatory protein, arsR family YP_002509753.1 PFAM: Major Facilitator Superfamily YP_002509754.1 PFAM: 4Fe-4S binding domain YP_002509755.1 PFAM: Sodium/calcium exchanger protein; Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein YP_002509756.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_002509757.1 PFAM: HTH domain; HTH domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PRD domain; PRD domain; DeoR-like helix-turn-helix domain YP_002509758.1 PFAM: Putative sugar-specific permease, SgaT/UlaA YP_002509759.1 PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family YP_002509760.1 PFAM: Plasmid maintenance system killer protein YP_002509761.1 PFAM: Type I restriction modification DNA specificity domain; Type I restriction modification DNA specificity domain YP_002509762.1 PFAM: N-6 DNA Methylase YP_002509763.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); EcoEI R protein C-terminal; Type III restriction enzyme, res subunit; TIGRFAM: putative glutamate--cysteine ligase/putative amino acid ligase YP_002509764.1 PFAM: Uncharacterized ACR, COG1576; TIGRFAM: conserved hypothetical protein TIGR00246 YP_002509765.1 PFAM: Trypsin YP_002509766.1 PFAM: Metallo-beta-lactamase superfamily YP_002509767.1 PFAM: CheB methylesterase; Response regulator receiver domain YP_002509768.1 PFAM: CheR methyltransferase, SAM binding domain YP_002509769.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002509770.1 PFAM: tRNA synthetases class I (I, L, M and V); Putative tRNA binding domain; tRNA synthetases class I (M); tRNA synthetases class I (I, L, M and V); TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase C-terminal region/beta chain YP_002509771.1 PFAM: Iron-containing alcohol dehydrogenase YP_002509772.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: conserved hypothetical protein TIGR00096 YP_002509773.1 PFAM: Methyltransferase small domain; Putative RNA methylase family UPF0020 YP_002509774.1 PFAM: Protein of unknown function (DUF972) YP_002509775.1 PFAM: PSP1 C-terminal conserved region YP_002509776.1 TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunits gamma and tau YP_002509777.1 PFAM: Protein of unknown function (DUF970) YP_002509778.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_002509781.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Glucose inhibited division protein A; FAD dependent oxidoreductase; FAD binding domain; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_002509782.1 PFAM: Domain of unknown function DUF11; Cna protein B-type domain; TIGRFAM: conserved repeat domain YP_002509785.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509786.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509787.1 PFAM: Bacterial extracellular solute-binding protein YP_002509788.1 PFAM: IMP dehydrogenase / GMP reductase domain; CBS domain pair; 2-nitropropane dioxygenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_002509789.1 PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; Glycosyl hydrolases family 2, sugar binding domain; Glycosyl hydrolases family 2, TIM barrel domain YP_002509790.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509791.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509792.1 PFAM: Bacterial extracellular solute-binding protein YP_002509793.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002509794.1 PFAM: Bacterial regulatory proteins, luxR family YP_002509796.1 PFAM: Acetyltransferase (GNAT) family YP_002509797.1 PFAM: alpha/beta hydrolase fold YP_002509798.1 PFAM: Glycosyl hydrolases family 43; Glycosyl hydrolases family 32 N terminal YP_002509799.1 PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; Glycosyl hydrolases family 2, sugar binding domain; Glycosyl hydrolases family 2, TIM barrel domain YP_002509800.1 PFAM: Beta-galactosidase; Glycosyl hydrolase family 1 YP_002509801.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509802.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509803.1 PFAM: Bacterial extracellular solute-binding protein YP_002509804.1 PFAM: Bacterial regulatory protein, arsR family YP_002509805.1 PFAM: Creatinase/Prolidase N-terminal domain; metallopeptidase family M24 YP_002509806.1 PFAM: GHMP kinases N terminal domain; GHMP kinases C terminal; TIGRFAM: galactokinase YP_002509807.1 PFAM: Galactose-1-phosphate uridyl transferase, N-terminal domain; Galactose-1-phosphate uridyl transferase, C-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1 YP_002509808.1 PFAM: Male sterility protein; NmrA-like family; Polysaccharide biosynthesis protein; RmlD substrate binding domain; 3-beta hydroxysteroid dehydrogenase/isomerase family; short chain dehydrogenase; NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_002509809.1 PFAM: Bacterial regulatory proteins, crp family; ROK family; MarR family YP_002509810.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain YP_002509811.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_002509812.1 PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain YP_002509813.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family YP_002509814.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family YP_002509816.1 PFAM: Protein of unknown function, DUF606 YP_002509817.1 PFAM: RecR protein; Toprim domain; TIGRFAM: recombination protein RecR YP_002509818.1 PFAM: Uncharacterized BCR, YbaB family COG0718; TIGRFAM: conserved hypothetical protein TIGR00103 YP_002509819.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunits gamma and tau YP_002509820.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_002509822.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S binding domain; 4Fe-4S binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric YP_002509823.1 PFAM: Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain YP_002509824.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_002509825.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509826.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509827.1 PFAM: Bacterial extracellular solute-binding protein YP_002509828.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002509829.1 PFAM: YheO-like PAS domain YP_002509830.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan YP_002509831.1 PFAM: Sodium:neurotransmitter symporter family YP_002509832.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_002509833.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase YP_002509834.1 PFAM: PP-loop family YP_002509835.1 PFAM: Helix-turn-helix; Peptidase S24-like YP_002509836.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_002509837.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_002509839.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain; Cache domain YP_002509840.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Pyridine nucleotide-disulphide oxidoreductase YP_002509841.1 PFAM: Protein of unknown function DUF89 YP_002509842.1 PFAM: Uncharacterized ArCR, COG2043 YP_002509843.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Glucose inhibited division protein A; Biotin-requiring enzyme; FAD binding domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_002509844.1 PFAM: Domain of unknown function (DUF1893) YP_002509845.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase) YP_002509846.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase YP_002509847.1 PFAM: D-Lysine 5,6-aminomutase alpha subunit; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain YP_002509849.1 TIGRFAM: conserved hypothetical protein YP_002509850.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_002509852.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Dihydrodipicolinate reductase, N-terminus YP_002509853.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: alanine dehydrogenase YP_002509854.1 PFAM: PPIC-type PPIASE domain YP_002509855.1 PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain YP_002509856.1 PFAM: Penicillin-binding protein 5, C-terminal domain; Beta-lactamase; D-alanyl-D-alanine carboxypeptidase YP_002509857.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_002509858.1 PFAM: MatE; Polysaccharide biosynthesis protein; MviN-like protein; TIGRFAM: stage V sporulation protein B YP_002509859.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: stage V sporulation protein T; looped-hinge helix DNA binding domain, AbrB family YP_002509860.1 PFAM: Type III restriction enzyme, res subunit; TRCF domain; Helicase conserved C-terminal domain; DEAD/DEAH box helicase; CarD-like/TRCF domain; TIGRFAM: transcription-repair coupling factor (mfd) YP_002509861.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_002509862.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_002509863.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_002509864.1 PFAM: Uncharacterized protein family UPF0007; Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase YP_002509866.1 PFAM: SpoVG YP_002509867.1 PFAM: AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain YP_002509869.1 PFAM: Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I YP_002509870.1 PFAM: MerR family regulatory protein YP_002509872.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_002509874.1 PFAM: Bacterial purine repressor, N-terminal; Phosphoribosyl transferase domain; TIGRFAM: xanthine phosphoribosyltransferase; pur operon repressor, Bacillus subtilis type YP_002509876.1 PFAM: GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_002509877.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_002509878.1 PFAM: ErfK/YbiS/YcfS/YnhG; LysM domain YP_002509879.1 PFAM: Sodium/calcium exchanger protein; Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger (cax); calcium/proton exchanger YP_002509880.1 PFAM: LysM domain YP_002509881.1 PFAM: LysM domain YP_002509885.1 PFAM: SCP-like extracellular protein YP_002509887.1 PFAM: PspC domain YP_002509888.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases YP_002509889.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_002509890.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509891.1 PFAM: ABC transporter; CBS domain pair; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit YP_002509892.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002509893.1 PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I YP_002509894.1 PFAM: PhoU family; PhoU family; TIGRFAM: phosphate transport system regulatory protein PhoU YP_002509895.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_002509896.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_002509897.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter, permease protein PstC YP_002509898.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein YP_002509899.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain; Cache domain YP_002509901.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_002509902.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter, permease protein PstC YP_002509903.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein YP_002509904.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box YP_002509905.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_002509906.1 PFAM: PhoU family; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter YP_002509907.1 PFAM: Glycosyl transferases group 1 YP_002509908.1 PFAM: Glycosyl hydrolases family 18 YP_002509910.1 PFAM: Protein of unknown function (DUF1021) YP_002509911.1 PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG YP_002509912.1 PFAM: Protein of unknown function (DUF458) YP_002509913.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_002509917.1 PFAM: Major Facilitator Superfamily YP_002509918.1 PFAM: Protein of unknown function (DUF441) YP_002509919.1 PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase YP_002509920.1 PFAM: (2R)-phospho-3-sulfolactate synthase (ComA) YP_002509921.1 PFAM: Transaldolase; TIGRFAM: transaldolase, putative, TalC family YP_002509922.1 PFAM: Glycosyl hydrolases family 18 YP_002509923.1 PFAM: Sigma-70, region 4; Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002509924.1 PFAM: Histidine kinase; Sensor protein DegS; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002509925.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_002509926.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_002509927.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain YP_002509928.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_002509929.1 PFAM: Glutamine amidotransferase class-I; Peptidase C26 YP_002509931.1 PFAM: ErfK/YbiS/YcfS/YnhG; Putative peptidoglycan binding domain YP_002509933.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_002509934.1 PFAM: Major Facilitator Superfamily YP_002509935.1 PFAM: Protein of unknown function (DUF1121) YP_002509936.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; Cation transporter/ATPase, N-terminus; Cation transporting ATPase, C-terminus; TIGRFAM: sarco/endoplasmic reticulum calcium-translocating P-type ATPase; potassium and/or sodium efflux P-type ATPase, fungal-type; plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002509937.1 PFAM: CAAX amino terminal protease family YP_002509939.1 PFAM: Heme NO binding; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_002509942.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_002509943.1 PFAM: LysM domain; LysM domain; LysM domain; LysM domain; LysM domain YP_002509944.1 PFAM: Polysaccharide biosynthesis protein; MviN-like protein; TIGRFAM: stage V sporulation protein B YP_002509945.1 PFAM: Aminotransferase class-V YP_002509946.1 Required for the synthesis of the thiazole moiety YP_002509947.1 PFAM: Protein of unknown function (DUF421) YP_002509949.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002509950.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_002509951.1 PFAM: AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_002509952.1 PFAM: Glutamine amidotransferases class-II; Phosphoribosyl transferase domain; TIGRFAM: amidophosphoribosyltransferase YP_002509953.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II YP_002509954.1 PFAM: CobB/CobQ-like glutamine amidotransferase domain; DJ-1/PfpI family; TIGRFAM: phosphoribosylformylglycinamidine synthase I YP_002509955.1 PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein YP_002509956.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002509957.1 PFAM: Lyase; TIGRFAM: adenylosuccinate lyase YP_002509958.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_002509959.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_002509960.1 PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; putative glutamate--cysteine ligase/putative amino acid ligase YP_002509961.1 PFAM: Polysaccharide biosynthesis/export protein YP_002509962.1 PFAM: Chain length determinant protein; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily YP_002509964.1 PFAM: LysM domain; LysM domain YP_002509965.1 PFAM: Protein of unknown function (DUF1232) YP_002509967.1 PFAM: Radical SAM superfamily; TIGRFAM: spore photoproduct lyase YP_002509968.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_002509969.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002509970.1 PFAM: ABC transporter YP_002509971.1 PFAM: Membrane transport protein YP_002509972.1 PFAM: Citrate transporter; Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_002509974.1 PFAM: PHP domain YP_002509975.1 PFAM: DUF218 domain YP_002509976.1 PFAM: Uncharacterized protein family UPF0047 YP_002509977.1 PFAM: Bacterial regulatory protein, arsR family YP_002509979.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain; Cache domain YP_002509980.1 PFAM: Patatin-like phospholipase YP_002509981.1 PFAM: Glutamine amidotransferases class-II; Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_002509982.1 PFAM: Uncharacterized protein family UPF0027 YP_002509984.1 PFAM: Glycosyl hydrolases family 32 N terminal YP_002509985.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_002509986.1 PFAM: Major Facilitator Superfamily YP_002509988.1 PFAM: Histone deacetylase domain YP_002509989.1 PFAM: Rubredoxin YP_002509990.1 PFAM: Flavodoxin; Metallo-beta-lactamase superfamily YP_002509993.1 PFAM: Alpha amylase, catalytic domain YP_002509994.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002509995.1 PFAM: SPFH domain / Band 7 family YP_002509996.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain; Cache domain YP_002509997.1 PFAM: CheB methylesterase; Response regulator receiver domain YP_002509998.1 PFAM: CheD YP_002509999.1 PFAM: Methyltransferase domain; CheR methyltransferase, all-alpha domain; CheR methyltransferase, SAM binding domain YP_002510000.1 PFAM: CheW-like domain YP_002510001.1 PFAM: Hpt domain; Signal transducing histidine kinase, homodimeric domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002510002.1 PFAM: Response regulator receiver domain YP_002510003.1 PFAM: STAS domain YP_002510005.1 PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK) YP_002510006.1 PFAM: ATP-sulfurylase; TIGRFAM: ATP sulphurylase YP_002510007.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain YP_002510008.1 PFAM: pfkB family carbohydrate kinase YP_002510009.1 PFAM: Branched-chain amino acid transport system / permease component YP_002510010.1 PFAM: ABC transporter; ABC transporter YP_002510011.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family YP_002510012.1 PFAM: Phosphomethylpyrimidine kinase; pfkB family carbohydrate kinase; TIGRFAM: tagatose-6-phosphate kinase YP_002510013.1 catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate YP_002510014.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolases YP_002510015.1 PFAM: MarR family; ROK family; TIGRFAM: ROK family protein (putative glucokinase) YP_002510017.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YP_002510018.1 PFAM: Male sterility protein; Polysaccharide biosynthesis protein; NAD dependent epimerase/dehydratase family; RmlD substrate binding domain; 3-beta hydroxysteroid dehydrogenase/isomerase family YP_002510019.1 PFAM: Glycosyl transferase family 2 YP_002510020.1 PFAM: Glycosyl transferases group 1 YP_002510022.1 PFAM: Glycosyl transferases group 1 YP_002510023.1 PFAM: Glycosyl transferases group 1 YP_002510024.1 PFAM: Sulfotransferase domain YP_002510025.1 PFAM: MviN-like protein; Polysaccharide biosynthesis protein; MatE YP_002510026.1 PFAM: Mannose-6-phosphate isomerase; Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002510028.1 PFAM: Uncharacterized protein family (UPF0236) YP_002510029.1 PFAM: Chain length determinant protein YP_002510030.1 PFAM: Chain length determinant protein YP_002510031.1 PFAM: Bacterial sugar transferase YP_002510032.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase YP_002510033.1 PFAM: Amidohydrolase family; Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_002510034.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_002510035.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_002510036.1 PFAM: Carbon-nitrogen hydrolase YP_002510037.1 PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain YP_002510038.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002510039.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002510041.1 PFAM: Bacterial extracellular solute-binding protein YP_002510042.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002510043.1 PFAM: HD domain YP_002510045.1 PFAM: Manganese containing catalase YP_002510046.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase A YP_002510047.1 TIGRFAM: serine O-acetyltransferase YP_002510048.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_002510049.1 PFAM: ATP-grasp domain; ATP-grasp domain; Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; ATP-grasp domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_002510050.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_002510051.1 PFAM: Lyase; TIGRFAM: adenylosuccinate lyase YP_002510052.1 TIGRFAM: DnaD and phage-associated domain YP_002510054.1 PFAM: DnaB-like helicase C terminal domain; DnaB-like helicase N terminal domain; TIGRFAM: replicative DNA helicase YP_002510056.1 PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; glycyl-radical enzyme activating protein family YP_002510057.1 PFAM: Pyruvate formate lyase; Glycine radical; TIGRFAM: formate acetyltransferase 1 YP_002510060.1 PFAM: Alpha amylase, catalytic domain YP_002510063.1 PFAM: Predicted permease YP_002510064.1 PFAM: Predicted permease YP_002510065.1 PFAM: ABC transporter YP_002510066.1 PFAM: Predicted permease YP_002510067.1 PFAM: Predicted permease YP_002510068.1 PFAM: Bacterial regulatory proteins, tetR family YP_002510069.1 PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; Bacterial regulatory helix-turn-helix proteins, AraC family YP_002510070.1 PFAM: Family 4 glycosyl hydrolase YP_002510071.1 PFAM: ATPase family associated with various cellular activities (AAA); Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease, Lon family YP_002510072.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_002510074.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_002510075.1 PFAM: OB-fold nucleic acid binding domain; Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_002510076.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_002510077.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding conserved hypothetical protein YP_002510078.1 PFAM: Bacterial protein of unknown function (DUF951) YP_002510079.1 PFAM: Mechanosensitive ion channel YP_002510080.1 PFAM: Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat YP_002510081.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_002510082.1 PFAM: Glycine cleavage system P-protein YP_002510083.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_002510084.1 PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: glycine cleavage system T protein YP_002510086.1 PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC YP_002510087.1 PFAM: Protein of unknown function, DUF583 YP_002510088.1 PFAM: Peptidase family M23 YP_002510090.1 PFAM: Protein of unknown function (DUF554) YP_002510091.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_002510092.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_002510093.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_002510094.1 PFAM: Glucose inhibited division protein; TIGRFAM: glucose-inhibited division protein B YP_002510095.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002510096.1 PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain; GTP-binding conserved hypothetical protein; tRNA modification GTPase TrmE YP_002510097.1 PFAM: R3H domain YP_002510098.1 PFAM: 60Kd inner membrane protein YP_002510099.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein TIGR00278 YP_002510100.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial