-- dump date 20120504_150019 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 235279000001 SEQ_END SEQ_END NC_004917.1 1799146 1799146 DR NC_004917.1; contig end 1799146..1799146 Helicobacter hepaticus ATCC 51449 NP_859532.1 CDS HH0001 NC_004917.1 141 2423 D similar to Helicobacter pylori toxin-like outer membrane protein; hypothetical protein 141..2423 Helicobacter hepaticus ATCC 51449 1493156 NP_859533.1 CDS trpC NC_004917.1 2484 3989 D phosphoribosylanthranilate isomerase 2484..3989 Helicobacter hepaticus ATCC 51449 1493157 NP_859534.1 CDS HH0003 NC_004917.1 3986 5032 D similar to Streptomyces coelicolor lipoprotein; hypothetical protein 3986..5032 Helicobacter hepaticus ATCC 51449 1493158 NP_859535.1 CDS HH0004 NC_004917.1 5053 5607 R similar to GGDEF family protein; hypothetical protein complement(5053..5607) Helicobacter hepaticus ATCC 51449 1493159 NP_859536.1 CDS HH0005 NC_004917.1 5633 6196 R similar to Campylobacter jejuni iron-binding protein; GGDEF family protein; hypothetical protein complement(5633..6196) Helicobacter hepaticus ATCC 51449 1493160 NP_859537.1 CDS rnhB NC_004917.1 6282 6905 R ribonuclease HII complement(6282..6905) Helicobacter hepaticus ATCC 51449 1493161 NP_859538.1 CDS hopZ NC_004917.1 7073 7681 R similar to Helicobacter pylori Hop-family proteins; hypothetical protein complement(7073..7681) Helicobacter hepaticus ATCC 51449 1493162 NP_859539.1 CDS obgE NC_004917.1 7845 8888 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(7845..8888) Helicobacter hepaticus ATCC 51449 1493163 NP_859540.1 CDS rpmA NC_004917.1 9016 9273 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(9016..9273) Helicobacter hepaticus ATCC 51449 1493164 NP_859541.1 CDS rplU NC_004917.1 9290 9604 R 50S ribosomal protein L21 complement(9290..9604) Helicobacter hepaticus ATCC 51449 1493165 NP_859542.1 CDS HH0011 NC_004917.1 9758 10585 D similar to Campylobacter jejuni periplasmic protein; related to metalloendopeptidases; hypothetical protein 9758..10585 Helicobacter hepaticus ATCC 51449 1493166 NP_859543.1 CDS HH0012 NC_004917.1 10571 11254 R similar to Campylobacter jejuni transcriptional regulator Cj0466; hypothetical protein complement(10571..11254) Helicobacter hepaticus ATCC 51449 1493167 NP_859544.1 CDS gidA NC_004917.1 11394 13283 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 11394..13283 Helicobacter hepaticus ATCC 51449 1493168 NP_859545.1 CDS HH0014 NC_004917.1 13308 13934 D similar to Helicobacter pylori HP0232 secreted protein involved in flagellar motility; hypothetical protein 13308..13934 Helicobacter hepaticus ATCC 51449 1493169 NP_859546.1 CDS ygiC NC_004917.1 13936 15108 D similar to Helicobacter pylori HP0233; hypothetical protein 13936..15108 Helicobacter hepaticus ATCC 51449 1493170 NP_859547.1 CDS HH0016 NC_004917.1 15102 16670 R predicted secreted protein; hypothetical protein complement(15102..16670) Helicobacter hepaticus ATCC 51449 1493171 NP_859548.1 CDS HH0017 NC_004917.1 16692 18134 R aspartate oxidase complement(16692..18134) Helicobacter hepaticus ATCC 51449 1493172 NP_859549.1 CDS HH0018 NC_004917.1 18344 18802 D similar to Helicobacter pylori HP0820; hypothetical protein 18344..18802 Helicobacter hepaticus ATCC 51449 1493173 NP_859550.1 CDS uvrC NC_004917.1 18792 20657 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 18792..20657 Helicobacter hepaticus ATCC 51449 1493174 NP_859551.1 CDS HH0020 NC_004917.1 20820 22151 D hypothetical protein 20820..22151 Helicobacter hepaticus ATCC 51449 1493175 NP_859552.1 CDS HH0021 NC_004917.1 22148 23623 D two-component sensor histidine kinase 22148..23623 Helicobacter hepaticus ATCC 51449 1493176 NP_859553.1 CDS HH0022 NC_004917.1 23613 24287 D two-component response regulator family protein 23613..24287 Helicobacter hepaticus ATCC 51449 1493177 NP_859554.1 CDS rho NC_004917.1 24450 25742 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 24450..25742 Helicobacter hepaticus ATCC 51449 1493178 NP_859555.1 CDS murI NC_004917.1 25751 26494 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 25751..26494 Helicobacter hepaticus ATCC 51449 1493179 NP_859556.1 CDS HH0025 NC_004917.1 26504 28696 R similar to Helicobacter pylori HP1089; hypothetical protein complement(26504..28696) Helicobacter hepaticus ATCC 51449 1493180 NP_859557.1 CDS tktA NC_004917.1 28808 30766 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(28808..30766) Helicobacter hepaticus ATCC 51449 1493181 NP_859558.1 CDS pheT NC_004917.1 30801 33206 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(30801..33206) Helicobacter hepaticus ATCC 51449 1493182 NP_859559.1 CDS pheS NC_004917.1 33206 34207 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(33206..34207) Helicobacter hepaticus ATCC 51449 1493183 NP_859560.1 CDS HH0029 NC_004917.1 34349 34690 D HIT hydrolase 34349..34690 Helicobacter hepaticus ATCC 51449 1493184 NP_859561.1 CDS tehB NC_004917.1 34762 35346 D similar to methyltransferases involved in tellurite resistance; hypothetical protein 34762..35346 Helicobacter hepaticus ATCC 51449 1493185 NP_859562.1 CDS HH0031 NC_004917.1 35415 36701 D possible cation efflux pump; hypothetical protein 35415..36701 Helicobacter hepaticus ATCC 51449 1493186 NP_859563.1 CDS HH0032 NC_004917.1 37157 37594 R hypothetical protein complement(37157..37594) Helicobacter hepaticus ATCC 51449 1493788 NP_859564.1 CDS feoB NC_004917.1 37606 39801 R ferrous ion uptake system protein complement(37606..39801) Helicobacter hepaticus ATCC 51449 1493789 NP_859565.1 CDS HH0034 NC_004917.1 39885 41126 R predicted secreted protein; hypothetical protein complement(39885..41126) Helicobacter hepaticus ATCC 51449 1493790 NP_859566.1 CDS panC NC_004917.1 41136 41969 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(41136..41969) Helicobacter hepaticus ATCC 51449 1493791 NP_859567.1 CDS pyrF NC_004917.1 42006 42707 R OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(42006..42707) Helicobacter hepaticus ATCC 51449 1493792 NP_859568.1 CDS nusB NC_004917.1 42708 43181 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(42708..43181) Helicobacter hepaticus ATCC 51449 1493793 NP_859569.1 CDS ribH NC_004917.1 43192 43662 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(43192..43662) Helicobacter hepaticus ATCC 51449 1493794 NP_859570.1 CDS kdsA NC_004917.1 43692 44504 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(43692..44504) Helicobacter hepaticus ATCC 51449 1493795 NP_859571.1 CDS icfA NC_004917.1 44515 45162 R carbonic anhydrase complement(44515..45162) Helicobacter hepaticus ATCC 51449 1493796 NP_859572.1 CDS HH0041 NC_004917.1 45310 45990 D predicted membrane-associated; hypothetical protein 45310..45990 Helicobacter hepaticus ATCC 51449 1493797 NP_859573.1 CDS yahD NC_004917.1 46021 46497 R ankyrin repeat-containing protein complement(46021..46497) Helicobacter hepaticus ATCC 51449 1493798 NP_859574.1 CDS katA NC_004917.1 46498 47934 R catalase complement(46498..47934) Helicobacter hepaticus ATCC 51449 1493799 NP_859575.1 CDS ribA NC_004917.1 48104 48688 D catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 48104..48688 Helicobacter hepaticus ATCC 51449 1493800 NP_859576.1 CDS moeA_1 NC_004917.1 48725 49975 D molybdopterin biosynthesis enzyme 48725..49975 Helicobacter hepaticus ATCC 51449 1493801 NP_859577.1 CDS moaD NC_004917.1 50021 50245 D small subunit; molybdopterin converting factor 50021..50245 Helicobacter hepaticus ATCC 51449 1493802 NP_859578.1 CDS moaE NC_004917.1 50233 50706 D large subunit; molybdopterin converting factor 50233..50706 Helicobacter hepaticus ATCC 51449 1493803 NP_859579.1 CDS mobB NC_004917.1 50690 51253 D molybdopterin-guanine dinucleotide biosynthesis protein MobB 50690..51253 Helicobacter hepaticus ATCC 51449 1493804 NP_859580.1 CDS mogA NC_004917.1 51253 51792 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 51253..51792 Helicobacter hepaticus ATCC 51449 1493805 NP_859581.1 CDS HH0050 NC_004917.1 51968 55228 D hypothetical protein 51968..55228 Helicobacter hepaticus ATCC 51449 1493806 NP_859582.1 CDS HH0051 NC_004917.1 55394 56263 R hypothetical protein complement(55394..56263) Helicobacter hepaticus ATCC 51449 1493807 NP_859583.1 CDS moaC NC_004917.1 56477 56956 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 56477..56956 Helicobacter hepaticus ATCC 51449 1493808 NP_859584.1 CDS HH0053 NC_004917.1 56957 58327 D similar to Vibrio cholerae VC0082; predicted secreted protein; hypothetical protein 56957..58327 Helicobacter hepaticus ATCC 51449 1493809 NP_859585.1 CDS HH0054 NC_004917.1 58324 59910 R similar to Yersinia pestis YPO2377; predicted membrane-associated; hypothetical protein complement(58324..59910) Helicobacter hepaticus ATCC 51449 1493810 NP_859586.1 CDS trxA_2 NC_004917.1 59970 60287 R thioredoxin complement(59970..60287) Helicobacter hepaticus ATCC 51449 1493811 NP_859587.1 CDS hyaA NC_004917.1 60643 61803 D Ni/Fe hydrogenase beta subunit 60643..61803 Helicobacter hepaticus ATCC 51449 1493812 NP_859588.1 CDS hyaB NC_004917.1 61814 63544 D Ni/Fe hydrogenase alpha subunit 61814..63544 Helicobacter hepaticus ATCC 51449 1493813 NP_859589.1 CDS hyaC NC_004917.1 63555 64319 D Ni/Fe hydrogenase cytochrome b subunit 63555..64319 Helicobacter hepaticus ATCC 51449 1493814 NP_859590.1 CDS hyaD NC_004917.1 64327 64866 D hydrogenase formation/expression protease HyaD/HupD 64327..64866 Helicobacter hepaticus ATCC 51449 1493815 NP_859591.1 CDS HH0060 NC_004917.1 64863 66656 D hypothetical protein 64863..66656 Helicobacter hepaticus ATCC 51449 1493816 NP_859592.1 CDS HH0061 NC_004917.1 66709 67479 D similar to Campylobacter jejuni periplasmic protein; hypothetical protein 66709..67479 Helicobacter hepaticus ATCC 51449 1493817 NP_859593.1 CDS metB NC_004917.1 67490 68641 D cystathionine gamma-synthase 67490..68641 Helicobacter hepaticus ATCC 51449 1493818 NP_859594.1 CDS cysK_1 NC_004917.1 68643 69584 D cysteine synthase 68643..69584 Helicobacter hepaticus ATCC 51449 1493819 NP_859595.1 CDS HH0064 NC_004917.1 69562 70341 R similar to Bacteroides fragilis glycosyl transferase; hypothetical protein complement(69562..70341) Helicobacter hepaticus ATCC 51449 1493820 NP_859596.1 CDS HH0065 NC_004917.1 70335 70496 R hypothetical protein complement(70335..70496) Helicobacter hepaticus ATCC 51449 1493821 NP_859597.1 CDS HH0066 NC_004917.1 70592 71065 D similar to sugar transferase; may become fused with HH0067 due to slipped strand mispairing; hypothetical protein 70592..71065 Helicobacter hepaticus ATCC 51449 1493822 NP_859598.1 CDS HH0067 NC_004917.1 71217 71825 D similar to sugar transferase; may become fused with HH0066 due to slipped strand misparing; hypothetical protein 71217..71825 Helicobacter hepaticus ATCC 51449 1493823 NP_859599.1 CDS HH0068 NC_004917.1 71863 72771 R similar to Streptococcus gordonii probable glycosyl transferase; hypothetical protein complement(71863..72771) Helicobacter hepaticus ATCC 51449 1493824 NP_859600.1 CDS HH0069 NC_004917.1 72768 73244 R may become fused with HH0070 due to slipped strand mispairing; alpha-1,2-fucosyltransferase fragment complement(72768..73244) Helicobacter hepaticus ATCC 51449 1493825 NP_859601.1 CDS HH0070 NC_004917.1 73214 73666 R may become fused with HH0069 due to slipped strand mispairing; alpha-1,2-fucosyltransferase fragment complement(73214..73666) Helicobacter hepaticus ATCC 51449 1493826 NP_859602.1 CDS HH0071 NC_004917.1 73683 74780 R predicted aminotransferase; hypothetical protein complement(73683..74780) Helicobacter hepaticus ATCC 51449 1493827 NP_859603.1 CDS HH0072 NC_004917.1 74801 75763 R predicted fucosyltransferase; hypothetical protein complement(74801..75763) Helicobacter hepaticus ATCC 51449 1493828 NP_859604.1 CDS HH0073 NC_004917.1 75766 76854 R predicted glycosyltransferase; hypothetical protein complement(75766..76854) Helicobacter hepaticus ATCC 51449 1493829 NP_859605.1 CDS cfa NC_004917.1 76926 77558 R possibly related to methylase involved in ubiquinone/menaquinone biosynthesis; cyclopropane fatty acid synthase and related methyltransferases; hypothetical protein complement(76926..77558) Helicobacter hepaticus ATCC 51449 1493830 NP_859606.1 CDS ygeA NC_004917.1 77551 78276 R aspartate racemase complement(77551..78276) Helicobacter hepaticus ATCC 51449 1493831 NP_859607.1 CDS HH0076 NC_004917.1 78397 79212 R similar to Salmonella typhi methyltransferase; hypothetical protein complement(78397..79212) Helicobacter hepaticus ATCC 51449 1493832 NP_859608.1 CDS HH0077 NC_004917.1 79209 79850 R predicted secreted protein; hypothetical protein complement(79209..79850) Helicobacter hepaticus ATCC 51449 1493833 NP_859609.1 CDS serB NC_004917.1 79823 80422 R phosphoserine phosphatase complement(79823..80422) Helicobacter hepaticus ATCC 51449 1493834 NP_859610.1 CDS HH0079 NC_004917.1 80419 81888 R hypothetical protein complement(80419..81888) Helicobacter hepaticus ATCC 51449 1493835 NP_859611.1 CDS HH0080 NC_004917.1 81950 83107 R hypothetical protein complement(81950..83107) Helicobacter hepaticus ATCC 51449 1493836 NP_859612.1 CDS HH0081 NC_004917.1 83104 84057 R similar to glycosyltransferases; hypothetical protein complement(83104..84057) Helicobacter hepaticus ATCC 51449 1493837 NP_859613.1 CDS HH0082 NC_004917.1 84050 84868 R UDP-N-acetylglucosamine 2-epimerase complement(84050..84868) Helicobacter hepaticus ATCC 51449 1493838 NP_859614.1 CDS HH0083 NC_004917.1 85287 86021 R hypothetical protein complement(85287..86021) Helicobacter hepaticus ATCC 51449 1493839 NP_859615.1 CDS HH0084 NC_004917.1 86018 87661 R similar to Campylobacter jejuni CJ1302; hypothetical protein complement(86018..87661) Helicobacter hepaticus ATCC 51449 1493840 NP_859616.1 CDS HH0085 NC_004917.1 87674 87772 R similar to Campylobacter jejuni CJ1301; may become fused with HH0086 due to slipped strand mispairing; hypothetical protein complement(87674..87772) Helicobacter hepaticus ATCC 51449 1493841 NP_859617.1 CDS HH0086 NC_004917.1 87774 88088 R similar to Campylobacter jejuni CJ1301; may become fused with HH0085 due to slipped strand mispairing; hypothetical protein complement(87774..88088) Helicobacter hepaticus ATCC 51449 1493842 NP_859618.1 CDS HH0087 NC_004917.1 88088 88342 R acyl carrier protein complement(88088..88342) Helicobacter hepaticus ATCC 51449 1493843 NP_859619.1 CDS HH0088 NC_004917.1 88345 88917 R hypothetical protein complement(88345..88917) Helicobacter hepaticus ATCC 51449 1493844 NP_859620.1 CDS HH0089 NC_004917.1 88914 89876 R hypothetical protein complement(88914..89876) Helicobacter hepaticus ATCC 51449 1493845 NP_859621.1 CDS HH0090 NC_004917.1 89982 91340 R similar to Haemophilus influenzae O-succinylbenzoate-CoA ligase; hypothetical protein complement(89982..91340) Helicobacter hepaticus ATCC 51449 1493846 NP_859622.1 CDS HH0091 NC_004917.1 91340 92851 R hypothetical protein complement(91340..92851) Helicobacter hepaticus ATCC 51449 1493847 NP_859623.1 CDS HH0092 NC_004917.1 92844 93578 R similar to Escherichia coli 3-oxoacyl-[acyl-carrier-protein] reductase; 3-oxoacyl-ACP reductase complement(92844..93578) Helicobacter hepaticus ATCC 51449 1493848 NP_859624.1 CDS HH0093 NC_004917.1 93571 93864 R hypothetical protein complement(93571..93864) Helicobacter hepaticus ATCC 51449 1493849 NP_859625.1 CDS HH0094 NC_004917.1 93865 94428 R hypothetical protein complement(93865..94428) Helicobacter hepaticus ATCC 51449 1493850 NP_859626.1 CDS HH0095 NC_004917.1 94428 94991 R similar to Campylobacter jejuni acetyl transferase; hypothetical protein complement(94428..94991) Helicobacter hepaticus ATCC 51449 1493851 NP_859627.1 CDS HH0096 NC_004917.1 95258 95704 D hypothetical protein 95258..95704 Helicobacter hepaticus ATCC 51449 1493852 NP_859628.1 CDS HH0097 NC_004917.1 95714 96115 D hypothetical protein 95714..96115 Helicobacter hepaticus ATCC 51449 1493853 NP_859629.1 CDS HH0098 NC_004917.1 96474 97508 R molybdenum cofactor biosynthesis protein A complement(96474..97508) Helicobacter hepaticus ATCC 51449 1493854 NP_859630.1 CDS HH0099 NC_004917.1 97587 98618 R dTDP-D-glucose 4,6-dehydratase complement(97587..98618) Helicobacter hepaticus ATCC 51449 1493855 NP_859631.1 CDS HH0100 NC_004917.1 98618 99493 R similar to Campylobacter jejuni glucose-1-phosphate thymidyltransferase; hypothetical protein complement(98618..99493) Helicobacter hepaticus ATCC 51449 1493856 NP_859632.1 CDS lepA NC_004917.1 99550 101364 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(99550..101364) Helicobacter hepaticus ATCC 51449 1493857 NP_859633.1 CDS ftsW_2 NC_004917.1 101556 102716 D cell division protein FtsW 101556..102716 Helicobacter hepaticus ATCC 51449 1493858 NP_859634.1 CDS HH0103 NC_004917.1 102730 103248 D predicted membrane-associated; hypothetical protein 102730..103248 Helicobacter hepaticus ATCC 51449 1493859 NP_859635.1 CDS hemD NC_004917.1 103256 103996 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 103256..103996 Helicobacter hepaticus ATCC 51449 1493860 NP_859636.1 CDS HH0105 NC_004917.1 104073 104903 D possible parvulin-like peptidyl-prolyl isomerase; hypothetical protein 104073..104903 Helicobacter hepaticus ATCC 51449 1493861 NP_859637.1 CDS fba NC_004917.1 104932 105855 D catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 104932..105855 Helicobacter hepaticus ATCC 51449 1493862 NP_859638.1 CDS HH0107 NC_004917.1 105950 106111 D hypothetical protein 105950..106111 Helicobacter hepaticus ATCC 51449 1493863 NP_859639.1 CDS efp NC_004917.1 106199 106762 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 106199..106762 Helicobacter hepaticus ATCC 51449 1493864 NP_859640.1 CDS clpA NC_004917.1 106821 109400 R ATP-binding subunit; ATP-dependent Clp protease ClpA complement(106821..109400) Helicobacter hepaticus ATCC 51449 1493865 NP_859641.1 CDS trmE NC_004917.1 109547 110977 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(109547..110977) Helicobacter hepaticus ATCC 51449 1493866 NP_859642.1 CDS HH0111 NC_004917.1 110913 111719 R hypothetical protein complement(110913..111719) Helicobacter hepaticus ATCC 51449 1493867 NP_859643.1 CDS HH0112 NC_004917.1 111722 113497 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(111722..113497) Helicobacter hepaticus ATCC 51449 1493868 NP_859644.1 CDS HH0113 NC_004917.1 113502 113771 R hypothetical protein complement(113502..113771) Helicobacter hepaticus ATCC 51449 1493869 NP_859645.1 CDS HH0114 NC_004917.1 113789 113959 D hypothetical protein 113789..113959 Helicobacter hepaticus ATCC 51449 1493870 NP_859646.1 CDS rnpA NC_004917.1 113886 114326 R protein component; ribonuclease P complement(113886..114326) Helicobacter hepaticus ATCC 51449 1493871 NP_859647.1 CDS rpmH NC_004917.1 114350 114484 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(114350..114484) Helicobacter hepaticus ATCC 51449 1493872 NP_859648.1 CDS HH0117 NC_004917.1 114544 115260 R predicted secreted protein; hypothetical protein complement(114544..115260) Helicobacter hepaticus ATCC 51449 1493873 NP_859649.1 CDS HH0118 NC_004917.1 115267 117186 R predicted membrane-associated; hypothetical protein complement(115267..117186) Helicobacter hepaticus ATCC 51449 1493874 NP_859650.1 CDS HH0119 NC_004917.1 117208 117588 R ExbD-like; biopolymer transport protein complement(117208..117588) Helicobacter hepaticus ATCC 51449 1493875 NP_859651.1 CDS HH0120 NC_004917.1 117585 118037 R ExbB-like; biopolymer transport protein complement(117585..118037) Helicobacter hepaticus ATCC 51449 1493876 NP_859652.1 CDS smpB NC_004917.1 118056 118523 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(118056..118523) Helicobacter hepaticus ATCC 51449 1493877 NP_859653.1 CDS HH0122 NC_004917.1 118525 119205 R catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(118525..119205) Helicobacter hepaticus ATCC 51449 1493878 NP_859654.1 CDS HH0123 NC_004917.1 119335 119574 R affects carbohydrate metabolism, has regulatory role in many processes; carbon storage regulator complement(119335..119574) Helicobacter hepaticus ATCC 51449 1493879 NP_859655.1 CDS truB NC_004917.1 119546 120400 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(119546..120400) Helicobacter hepaticus ATCC 51449 1493880 NP_859656.1 CDS HH0125 NC_004917.1 120463 121524 R predicted secreted protein; hypothetical protein complement(120463..121524) Helicobacter hepaticus ATCC 51449 1493881 NP_859657.1 CDS HH0126 NC_004917.1 121531 122391 R predicted membrane-associated; hypothetical protein complement(121531..122391) Helicobacter hepaticus ATCC 51449 1493882 NP_859658.1 CDS HH0127 NC_004917.1 122388 122885 R HIT family; hypothetical protein complement(122388..122885) Helicobacter hepaticus ATCC 51449 1493883 NP_859659.1 CDS HH0128 NC_004917.1 122898 124379 R similar to Campylobacter jejuni UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase; hypothetical protein complement(122898..124379) Helicobacter hepaticus ATCC 51449 1493884 NP_859660.1 CDS HH0129 NC_004917.1 124390 124680 R possible acylphosphatase; hypothetical protein complement(124390..124680) Helicobacter hepaticus ATCC 51449 1493885 NP_859661.1 CDS HH0130 NC_004917.1 124677 125282 R similar to Helicobacter pylori JHP0676; hypothetical protein complement(124677..125282) Helicobacter hepaticus ATCC 51449 1493886 NP_859662.1 CDS ddl NC_004917.1 125433 126485 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A complement(125433..126485) Helicobacter hepaticus ATCC 51449 1493887 NP_859663.1 CDS uvrA NC_004917.1 126488 129319 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(126488..129319) Helicobacter hepaticus ATCC 51449 1493187 NP_859664.1 CDS HH0133 NC_004917.1 129365 129643 R predicted secreted protein; hypothetical protein complement(129365..129643) Helicobacter hepaticus ATCC 51449 1493188 NP_859665.1 CDS HH0134 NC_004917.1 129507 129629 D hypothetical protein 129507..129629 Helicobacter hepaticus ATCC 51449 1493189 NP_859666.1 CDS serA NC_004917.1 129667 131247 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(129667..131247) Helicobacter hepaticus ATCC 51449 1493190 NP_859667.1 CDS HH0136 NC_004917.1 131269 131733 R similar to Helicobacter pylori HP0398; predicted secreted protein; hypothetical protein complement(131269..131733) Helicobacter hepaticus ATCC 51449 1493191 NP_859668.1 CDS rpsA NC_004917.1 131750 133408 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(131750..133408) Helicobacter hepaticus ATCC 51449 1493192 NP_859669.1 CDS ispH NC_004917.1 133502 134323 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(133502..134323) Helicobacter hepaticus ATCC 51449 1493193 NP_859670.1 CDS aroA NC_004917.1 134313 135629 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(134313..135629) Helicobacter hepaticus ATCC 51449 1493194 NP_859671.1 CDS HH0140 NC_004917.1 135696 136754 R two component system sensor kinase complement(135696..136754) Helicobacter hepaticus ATCC 51449 1493195 NP_859672.1 CDS HH0141 NC_004917.1 136738 137121 R similar to Campylobacter jejuni CJ1463; hypothetical protein complement(136738..137121) Helicobacter hepaticus ATCC 51449 1493196 NP_859673.1 CDS flgI NC_004917.1 137132 138178 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA complement(137132..138178) Helicobacter hepaticus ATCC 51449 1493197 NP_859674.1 CDS HH0143 NC_004917.1 138399 139010 R similar to Helicobacter pylori JHP1024; predicted secreted protein; hypothetical protein complement(138399..139010) Helicobacter hepaticus ATCC 51449 1493198 NP_859675.1 CDS HH0144 NC_004917.1 139010 139441 R hypothetical protein complement(139010..139441) Helicobacter hepaticus ATCC 51449 1493199 NP_859676.1 CDS HH0145 NC_004917.1 139588 139716 D predicted secreted protein; hypothetical protein 139588..139716 Helicobacter hepaticus ATCC 51449 1493200 NP_859677.1 CDS HH0146 NC_004917.1 139780 139878 R similar to Helicobacter pylori HP1515; hypothetical protein complement(139780..139878) Helicobacter hepaticus ATCC 51449 1493201 NP_859678.1 CDS HH0147 NC_004917.1 139870 141612 D predicted secreted protein; hypothetical protein 139870..141612 Helicobacter hepaticus ATCC 51449 1493202 NP_859679.1 CDS HH0148 NC_004917.1 141622 141951 R predicted secreted protein; hypothetical protein complement(141622..141951) Helicobacter hepaticus ATCC 51449 1493203 NP_859680.1 CDS hisG NC_004917.1 141965 142582 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase complement(141965..142582) Helicobacter hepaticus ATCC 51449 1493204 NP_859681.1 CDS HH0150 NC_004917.1 142614 143234 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(142614..143234) Helicobacter hepaticus ATCC 51449 1493205 NP_859682.1 CDS HH0151 NC_004917.1 143234 144259 R similar to Helicobacter pylori JHP0797; predicted secreted protein; hypothetical protein complement(143234..144259) Helicobacter hepaticus ATCC 51449 1493206 NP_859683.1 CDS HH0152 NC_004917.1 144289 144942 R similar to Helicobacter pylori JHP0798; predicted membrane-associated; hypothetical protein complement(144289..144942) Helicobacter hepaticus ATCC 51449 1493207 NP_859684.1 CDS dut NC_004917.1 144953 145429 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(144953..145429) Helicobacter hepaticus ATCC 51449 1493208 NP_859685.1 CDS greA NC_004917.1 145433 145924 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(145433..145924) Helicobacter hepaticus ATCC 51449 1493209 NP_859686.1 CDS putP NC_004917.1 146038 147339 R sodium/proline symporter complement(146038..147339) Helicobacter hepaticus ATCC 51449 1493210 NP_859687.1 CDS HH0156 NC_004917.1 147609 151109 R similar to Campylobacter jejuni dehydrogenase CJ1505; hypothetical protein complement(147609..151109) Helicobacter hepaticus ATCC 51449 1493211 NP_859688.1 CDS HH0157 NC_004917.1 151140 151235 R hypothetical protein complement(151140..151235) Helicobacter hepaticus ATCC 51449 1493212 NP_859689.1 CDS napA NC_004917.1 151422 154235 D periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 151422..154235 Helicobacter hepaticus ATCC 51449 1493213 NP_859690.1 CDS napG NC_004917.1 154245 155087 D part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 154245..155087 Helicobacter hepaticus ATCC 51449 1493214 NP_859691.1 CDS napH NC_004917.1 155087 156016 D part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 155087..156016 Helicobacter hepaticus ATCC 51449 1493215 NP_859692.1 CDS napB NC_004917.1 156013 156576 D small subunit; periplasmic nitrate reductase 156013..156576 Helicobacter hepaticus ATCC 51449 1493216 NP_859693.1 CDS HH0162 NC_004917.1 156588 157637 D similar to Campylobacter jejuni periplasmic protein CJ0784; hypothetical protein 156588..157637 Helicobacter hepaticus ATCC 51449 1493217 NP_859694.1 CDS napD NC_004917.1 157637 157996 D periplasmic nitrate reductase component NapD 157637..157996 Helicobacter hepaticus ATCC 51449 1493218 NP_859695.1 CDS HH0164 NC_004917.1 158071 158463 R similar to Campylobacter jejuni CJ0465c; hypothetical protein complement(158071..158463) Helicobacter hepaticus ATCC 51449 1493219 NP_859696.1 CDS HH0165 NC_004917.1 158583 159020 R similar to Helicobacter pylori HP1502; predicted membrane-associated; hypothetical protein complement(158583..159020) Helicobacter hepaticus ATCC 51449 1493220 NP_859697.1 CDS HH0166 NC_004917.1 159256 159708 D similar to Campylobacter jejuni transcriptional regulator Cj0466; hypothetical protein 159256..159708 Helicobacter hepaticus ATCC 51449 1493221 NP_859698.1 CDS HH0167 NC_004917.1 159703 161079 R possible cation efflux pump; hypothetical protein complement(159703..161079) Helicobacter hepaticus ATCC 51449 1493222 NP_859699.1 CDS kdsB NC_004917.1 161093 161818 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(161093..161818) Helicobacter hepaticus ATCC 51449 1493223 NP_859700.1 CDS HH0169 NC_004917.1 161887 163098 R hypothetical protein complement(161887..163098) Helicobacter hepaticus ATCC 51449 1493224 NP_859701.1 CDS HH0170 NC_004917.1 163233 163412 D predicted secreted protein; hypothetical protein 163233..163412 Helicobacter hepaticus ATCC 51449 1493225 NP_859702.1 CDS HH0171 NC_004917.1 163418 165418 D predicted membrane-associated; hypothetical protein 163418..165418 Helicobacter hepaticus ATCC 51449 1493226 NP_859703.1 CDS gmd NC_004917.1 165492 166628 D GDP-D-mannose dehydratase 165492..166628 Helicobacter hepaticus ATCC 51449 1493227 NP_859704.1 CDS HH0173 NC_004917.1 166657 167700 D similar to Campylobacter jejuni fucose synthetase; hypothetical protein 166657..167700 Helicobacter hepaticus ATCC 51449 1493228 NP_859705.1 CDS HH0174 NC_004917.1 167702 170830 R possible cation efflux pump; hypothetical protein complement(167702..170830) Helicobacter hepaticus ATCC 51449 1493229 NP_859706.1 CDS HH0175 NC_004917.1 170840 172021 R possible cation efflux pump; hypothetical protein complement(170840..172021) Helicobacter hepaticus ATCC 51449 1493230 NP_859707.1 CDS ygaG NC_004917.1 172273 172770 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(172273..172770) Helicobacter hepaticus ATCC 51449 1493231 NP_859708.1 CDS HH0177 NC_004917.1 172826 173260 R similar to Campylobacter jejuni membrane protein CJ0341c; hypothetical protein complement(172826..173260) Helicobacter hepaticus ATCC 51449 1493232 NP_859709.1 CDS HH0178 NC_004917.1 173304 174239 R Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase complement(173304..174239) Helicobacter hepaticus ATCC 51449 1493233 NP_859710.1 CDS argB NC_004917.1 174324 175166 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 174324..175166 Helicobacter hepaticus ATCC 51449 1493234 NP_859711.1 CDS HH0180 NC_004917.1 175163 175642 D similar to Helicobacter pylori JHP0087; hypothetical protein 175163..175642 Helicobacter hepaticus ATCC 51449 1493235 NP_859712.1 CDS HH0181 NC_004917.1 175658 175894 D may become fused with HH0182 due to slipped strand mispairing; hypothetical protein 175658..175894 Helicobacter hepaticus ATCC 51449 1493236 NP_859713.1 CDS HH0182 NC_004917.1 175875 176456 D may become fused with HH0181 due to slipped strand mispairing; hypothetical protein 175875..176456 Helicobacter hepaticus ATCC 51449 1493237 NP_859714.1 CDS flgE NC_004917.1 176944 179181 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(176944..179181) Helicobacter hepaticus ATCC 51449 1493238 NP_859715.1 CDS flgD NC_004917.1 179178 179999 R acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein complement(179178..179999) Helicobacter hepaticus ATCC 51449 1493239 NP_859716.1 CDS HH0185 NC_004917.1 180021 181256 R hypothetical protein complement(180021..181256) Helicobacter hepaticus ATCC 51449 1493240 NP_859717.1 CDS HH0186 NC_004917.1 181393 182301 R hypothetical protein complement(181393..182301) Helicobacter hepaticus ATCC 51449 1493241 NP_859718.1 CDS HH0187 NC_004917.1 182568 183254 R similar to Neisseria meningitidis periplasmic protein; hypothetical protein complement(182568..183254) Helicobacter hepaticus ATCC 51449 1493242 NP_859719.1 CDS HH0188 NC_004917.1 183254 184150 R predicted secreted protein; hypothetical protein complement(183254..184150) Helicobacter hepaticus ATCC 51449 1493243 NP_859720.1 CDS HH0189 NC_004917.1 184273 185013 R predicted secreted protein; hypothetical protein complement(184273..185013) Helicobacter hepaticus ATCC 51449 1493244 NP_859721.1 CDS HH0190 NC_004917.1 185029 185337 R predicted secreted protein; hypothetical protein complement(185029..185337) Helicobacter hepaticus ATCC 51449 1493245 NP_859722.1 CDS HH0191 NC_004917.1 185594 185716 D predicted membrane-associated; hypothetical protein 185594..185716 Helicobacter hepaticus ATCC 51449 1493246 NP_859723.1 CDS HH0192 NC_004917.1 185783 185908 R hypothetical protein complement(185783..185908) Helicobacter hepaticus ATCC 51449 1493247 NP_859724.2 CDS dcd NC_004917.1 186061 186627 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(186061..186627) Helicobacter hepaticus ATCC 51449 1493248 NP_859725.1 CDS accB NC_004917.1 186721 187194 D biotin carboxyl carrier protein 186721..187194 Helicobacter hepaticus ATCC 51449 1493249 NP_859726.1 CDS accC NC_004917.1 187204 188568 D biotin carboxylase; biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA; catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; biotin carboxylase 187204..188568 Helicobacter hepaticus ATCC 51449 1493250 NP_859727.1 CDS HH0196 NC_004917.1 188600 189289 D hypothetical protein 188600..189289 Helicobacter hepaticus ATCC 51449 1493251 NP_859728.1 CDS HH0197 NC_004917.1 189306 190484 D predicted aminotransferase; hypothetical protein 189306..190484 Helicobacter hepaticus ATCC 51449 1493252 NP_859729.1 CDS HH0198 NC_004917.1 190571 192229 D similar to Campylobacter jejuni small Ni/fe-hydrogenase CJ1399c; hypothetical protein 190571..192229 Helicobacter hepaticus ATCC 51449 1493253 NP_859730.1 CDS HH0199 NC_004917.1 192315 193118 D hypothetical protein 192315..193118 Helicobacter hepaticus ATCC 51449 1493254 NP_859731.1 CDS HH0200 NC_004917.1 193150 193827 D hypothetical protein 193150..193827 Helicobacter hepaticus ATCC 51449 1493255 NP_859732.1 CDS HH0201 NC_004917.1 194149 194658 D predicted membrane-associated; hypothetical protein 194149..194658 Helicobacter hepaticus ATCC 51449 1493256 NP_859733.1 CDS HH0202 NC_004917.1 194663 195130 D similar to tellurite resistance permeases; hypothetical protein 194663..195130 Helicobacter hepaticus ATCC 51449 1493257 NP_859734.1 CDS glf NC_004917.1 195137 196237 R UDP-galactopyranose mutase complement(195137..196237) Helicobacter hepaticus ATCC 51449 1493258 NP_859735.1 CDS HH0204 NC_004917.1 196241 197284 R glycosyl transferase complement(196241..197284) Helicobacter hepaticus ATCC 51449 1493259 NP_859736.1 CDS HH0205 NC_004917.1 197365 198495 R glycosyl transferase complement(197365..198495) Helicobacter hepaticus ATCC 51449 1493260 NP_859737.1 CDS HH0206 NC_004917.1 198557 199489 R similar to Klebsiella pneumonia RFBC protein; hypothetical protein complement(198557..199489) Helicobacter hepaticus ATCC 51449 1493261 NP_859738.1 CDS HH0207 NC_004917.1 199492 200310 R similar to Klebsiella pneumonia RFBC protein; hypothetical protein complement(199492..200310) Helicobacter hepaticus ATCC 51449 1493262 NP_859739.1 CDS HH0208 NC_004917.1 200539 201606 R bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(200539..201606) Helicobacter hepaticus ATCC 51449 1493263 NP_859740.1 CDS HH0209 NC_004917.1 201638 201745 R hypothetical protein complement(201638..201745) Helicobacter hepaticus ATCC 51449 1493264 NP_859741.1 CDS dps NC_004917.1 201766 202236 R starvation-inducible DNA-binding protein Dps complement(201766..202236) Helicobacter hepaticus ATCC 51449 1493265 NP_859742.1 CDS HH0211 NC_004917.1 202275 202397 R hypothetical protein complement(202275..202397) Helicobacter hepaticus ATCC 51449 1493266 NP_859743.1 CDS HH0212 NC_004917.1 203064 203540 D hypothetical protein 203064..203540 Helicobacter hepaticus ATCC 51449 1493267 NP_859744.1 CDS HH0213 NC_004917.1 203584 204456 D hypothetical protein 203584..204456 Helicobacter hepaticus ATCC 51449 1493268 NP_859745.1 CDS HH0214 NC_004917.1 204449 205273 R hypothetical protein complement(204449..205273) Helicobacter hepaticus ATCC 51449 1493269 NP_859746.1 CDS HH0215 NC_004917.1 205388 205894 D cytochrome c-type protein; hypothetical protein 205388..205894 Helicobacter hepaticus ATCC 51449 1493270 NP_859747.1 CDS HH0216 NC_004917.1 205917 206240 D similar to Campylobacter jejuni periplasmic cytochrome c CJ1357c; hypothetical protein 205917..206240 Helicobacter hepaticus ATCC 51449 1493271 NP_859748.1 CDS HH0217 NC_004917.1 206284 207768 D similar to cytochrome c-type proteins; hypothetical protein 206284..207768 Helicobacter hepaticus ATCC 51449 1493272 NP_859749.1 CDS HH0218 NC_004917.1 207823 207963 D hypothetical protein 207823..207963 Helicobacter hepaticus ATCC 51449 1493273 NP_859750.1 CDS HH0219 NC_004917.1 208046 208870 D hypothetical protein 208046..208870 Helicobacter hepaticus ATCC 51449 1493274 NP_859751.1 CDS dgkA NC_004917.1 208882 209292 D diacylglycerol kinase 208882..209292 Helicobacter hepaticus ATCC 51449 1493275 NP_859752.1 CDS HH0221 NC_004917.1 209299 210069 R predicted secreted protein; hypothetical protein complement(209299..210069) Helicobacter hepaticus ATCC 51449 1493276 NP_859753.1 CDS HH0222 NC_004917.1 210145 213219 R similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefC; hypothetical protein complement(210145..213219) Helicobacter hepaticus ATCC 51449 1493277 NP_859754.1 CDS HH0223 NC_004917.1 213219 213920 R similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefB; hypothetical protein complement(213219..213920) Helicobacter hepaticus ATCC 51449 1493278 NP_859755.1 CDS HH0224 NC_004917.1 213939 215297 R similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefA; hypothetical protein complement(213939..215297) Helicobacter hepaticus ATCC 51449 1493279 NP_859756.1 CDS fdhD NC_004917.1 215394 216173 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(215394..216173) Helicobacter hepaticus ATCC 51449 1493280 NP_859757.1 CDS fdhC NC_004917.1 216182 217156 R gamma subunit; formate dehydrogenase-N complement(216182..217156) Helicobacter hepaticus ATCC 51449 1493281 NP_859758.1 CDS fdhB NC_004917.1 217167 217796 R Fe-S-cluster-containing formate dehydrogenase component 1 complement(217167..217796) Helicobacter hepaticus ATCC 51449 1493282 NP_859759.1 CDS HH0228 NC_004917.1 217811 220057 R similar to Campylobacter jejuni formate dehydrogenase; iron-sulfur subunit; hypothetical protein complement(217811..220057) Helicobacter hepaticus ATCC 51449 1493283 NP_859760.1 CDS HH0229 NC_004917.1 220079 220633 R similar to Campylobacter jejuni formate dehydrogenase; large subunit; hypothetical protein complement(220079..220633) Helicobacter hepaticus ATCC 51449 1493284 NP_859761.1 CDS HH0230 NC_004917.1 220653 220868 R similar to Campylobacter jejuni possible periplasmic protein CJ1513c; hypothetical protein complement(220653..220868) Helicobacter hepaticus ATCC 51449 1493285 NP_859762.1 CDS HH0231 NC_004917.1 220957 221601 R hypothetical protein complement(220957..221601) Helicobacter hepaticus ATCC 51449 1493286 NP_859763.1 CDS HH0232 NC_004917.1 221601 223130 R similar to Campylobacter jejuni ferredoxin CJ1377c; hypothetical protein complement(221601..223130) Helicobacter hepaticus ATCC 51449 1493287 NP_859764.1 CDS HH0233 NC_004917.1 223218 224198 R predicted membrane-associated; hypothetical protein complement(223218..224198) Helicobacter hepaticus ATCC 51449 1493288 NP_859765.1 CDS HH0234 NC_004917.1 224333 225118 R predicted membrane-associated; hypothetical protein complement(224333..225118) Helicobacter hepaticus ATCC 51449 1493289 NP_859766.1 CDS HH0235 NC_004917.1 225105 226610 R hypothetical protein complement(225105..226610) Helicobacter hepaticus ATCC 51449 1493290 NP_859767.1 CDS HH0236 NC_004917.1 226607 227245 R predicted membrane-associated; hypothetical protein complement(226607..227245) Helicobacter hepaticus ATCC 51449 1493291 NP_859768.1 CDS HH0237 NC_004917.1 227242 228036 R hypothetical protein complement(227242..228036) Helicobacter hepaticus ATCC 51449 1493292 NP_859769.1 CDS HH0238 NC_004917.1 228126 228986 R DNA adenine methylase complement(228126..228986) Helicobacter hepaticus ATCC 51449 1493293 NP_859770.1 CDS HH0239 NC_004917.1 228983 229768 R type II restriction endonuclease complement(228983..229768) Helicobacter hepaticus ATCC 51449 1493294 NP_859771.1 CDS HH0240 NC_004917.1 229864 230250 R hypothetical protein complement(229864..230250) Helicobacter hepaticus ATCC 51449 1493295 NP_859772.1 CDS HH0241 NC_004917.1 230306 231583 R predicted membrane-associated; hypothetical protein complement(230306..231583) Helicobacter hepaticus ATCC 51449 1493296 NP_859773.1 CDS HH0242 NC_004917.1 231618 234416 R hypothetical protein complement(231618..234416) Helicobacter hepaticus ATCC 51449 1493297 NP_859774.1 CDS HH0243 NC_004917.1 234543 235052 R similar to Vibrio cholerae hcp protein VCA0017 and VC1415; hypothetical protein complement(234543..235052) Helicobacter hepaticus ATCC 51449 1493298 NP_859775.1 CDS HH0244 NC_004917.1 235149 236144 R similar to Vibrio cholerae VCA0111; hypothetical protein complement(235149..236144) Helicobacter hepaticus ATCC 51449 1493299 NP_859776.1 CDS HH0245 NC_004917.1 236141 237856 R similar to Vibrio cholerae VCA0110; hypothetical protein complement(236141..237856) Helicobacter hepaticus ATCC 51449 1493300 NP_859777.1 CDS HH0246 NC_004917.1 237926 238315 R similar to Vibrio cholerae VCA0109; hypothetical protein complement(237926..238315) Helicobacter hepaticus ATCC 51449 1493301 NP_859778.1 CDS HH0247 NC_004917.1 238319 239791 R similar to Vibrio cholerae VCA0108; hypothetical protein complement(238319..239791) Helicobacter hepaticus ATCC 51449 1493302 NP_859779.1 CDS HH0248 NC_004917.1 239839 240336 R similar to Vibrio cholerae VCA0107; hypothetical protein complement(239839..240336) Helicobacter hepaticus ATCC 51449 1493303 NP_859780.1 CDS HH0249 NC_004917.1 240524 241060 D similar to Vibrio cholerae VCA0113; hypothetical protein 240524..241060 Helicobacter hepaticus ATCC 51449 1493304 NP_859781.1 CDS HH0250 NC_004917.1 241053 242432 D similar to Vibrio cholerae VCA0114; hypothetical protein 241053..242432 Helicobacter hepaticus ATCC 51449 1493305 NP_859782.1 CDS HH0251 NC_004917.1 242444 243232 D similar to Vibrio cholerae VCA0115; hypothetical protein 242444..243232 Helicobacter hepaticus ATCC 51449 1493306 NP_859783.1 CDS HH0252 NC_004917.1 243237 246791 D similar to Vibrio cholerae IcmF; VirB10-like protein; hypothetical protein 243237..246791 Helicobacter hepaticus ATCC 51449 1493307 NP_859784.1 CDS HH0253 NC_004917.1 246801 247781 D hypothetical protein 246801..247781 Helicobacter hepaticus ATCC 51449 1493308 NP_859785.1 CDS HH0254 NC_004917.1 247872 249140 R hypothetical protein complement(247872..249140) Helicobacter hepaticus ATCC 51449 1493309 NP_859786.1 CDS HH0255 NC_004917.1 249168 253067 R predicted membrane-associated; hypothetical protein complement(249168..253067) Helicobacter hepaticus ATCC 51449 1493310 NP_859787.1 CDS HH0256 NC_004917.1 253173 254729 R hypothetical protein complement(253173..254729) Helicobacter hepaticus ATCC 51449 1493311 NP_859788.1 CDS HH0257 NC_004917.1 254722 256059 R hypothetical protein complement(254722..256059) Helicobacter hepaticus ATCC 51449 1493312 NP_859789.1 CDS HH0258 NC_004917.1 256069 256437 R predicted membrane-associated; hypothetical protein complement(256069..256437) Helicobacter hepaticus ATCC 51449 1493313 NP_859790.1 CDS HH0259 NC_004917.1 256448 257131 R hypothetical protein complement(256448..257131) Helicobacter hepaticus ATCC 51449 1493314 NP_859791.1 CDS HH0260 NC_004917.1 257124 258914 R virB4-like protein; hypothetical protein complement(257124..258914) Helicobacter hepaticus ATCC 51449 1493315 NP_859792.1 CDS HH0261 NC_004917.1 258911 259519 R predicted membrane-associated; hypothetical protein complement(258911..259519) Helicobacter hepaticus ATCC 51449 1493316 NP_859793.1 CDS HH0262 NC_004917.1 260339 260572 R hypothetical protein complement(260339..260572) Helicobacter hepaticus ATCC 51449 1493317 NP_859794.1 CDS HH0263 NC_004917.1 260650 260802 R predicted membrane-associated; hypothetical protein complement(260650..260802) Helicobacter hepaticus ATCC 51449 1493318 NP_859795.1 CDS HH0264 NC_004917.1 260976 261083 R hypothetical protein complement(260976..261083) Helicobacter hepaticus ATCC 51449 1493319 NP_859796.1 CDS HH0265 NC_004917.1 261105 261455 D hypothetical protein 261105..261455 Helicobacter hepaticus ATCC 51449 1493320 NP_859797.1 CDS HH0266 NC_004917.1 261497 262198 D hypothetical protein 261497..262198 Helicobacter hepaticus ATCC 51449 1493321 NP_859798.1 CDS HH0267 NC_004917.1 262248 262463 D predicted membrane-associated; hypothetical protein 262248..262463 Helicobacter hepaticus ATCC 51449 1493322 NP_859799.1 CDS HH0268 NC_004917.1 262472 262783 D similar to Campylobacter jejuni periplasmic protein; hypothetical protein 262472..262783 Helicobacter hepaticus ATCC 51449 1493323 NP_859800.1 CDS HH0269 NC_004917.1 263405 264250 R integrase complement(263405..264250) Helicobacter hepaticus ATCC 51449 1493324 NP_859801.1 CDS HH0270 NC_004917.1 264681 266786 R hypothetical protein complement(264681..266786) Helicobacter hepaticus ATCC 51449 1493325 NP_859802.1 CDS HH0271 NC_004917.1 266913 267017 D hypothetical protein 266913..267017 Helicobacter hepaticus ATCC 51449 1493326 NP_859803.1 CDS HH0272 NC_004917.1 267829 268335 R hypothetical protein complement(267829..268335) Helicobacter hepaticus ATCC 51449 1493327 NP_859804.1 CDS HH0273 NC_004917.1 268350 268697 R hypothetical protein complement(268350..268697) Helicobacter hepaticus ATCC 51449 1493154 NP_859805.1 CDS HH0274 NC_004917.1 268841 269578 R hypothetical protein complement(268841..269578) Helicobacter hepaticus ATCC 51449 1493328 NP_859806.1 CDS HH0275 NC_004917.1 270051 273479 D virD4-like protein; hypothetical protein 270051..273479 Helicobacter hepaticus ATCC 51449 1493329 NP_859807.1 CDS HH0276 NC_004917.1 273583 274074 R hypothetical protein complement(273583..274074) Helicobacter hepaticus ATCC 51449 1493330 NP_859808.1 CDS HH0277 NC_004917.1 274388 274930 D hypothetical protein 274388..274930 Helicobacter hepaticus ATCC 51449 1493331 NP_859809.1 CDS HH0278 NC_004917.1 274985 275353 D hypothetical protein 274985..275353 Helicobacter hepaticus ATCC 51449 1493332 NP_859810.1 CDS HH0279 NC_004917.1 275943 276164 D hypothetical protein 275943..276164 Helicobacter hepaticus ATCC 51449 1493333 NP_859811.1 CDS HH0280 NC_004917.1 276333 277097 D hypothetical protein 276333..277097 Helicobacter hepaticus ATCC 51449 1493334 NP_859812.1 CDS HH0281 NC_004917.1 277272 277757 R hypothetical protein complement(277272..277757) Helicobacter hepaticus ATCC 51449 1493335 NP_859813.1 CDS HH0282 NC_004917.1 277768 278403 R hypothetical protein complement(277768..278403) Helicobacter hepaticus ATCC 51449 1493336 NP_859814.1 CDS HH0283 NC_004917.1 278548 278862 R hypothetical protein complement(278548..278862) Helicobacter hepaticus ATCC 51449 1493337 NP_859815.1 CDS HH0284 NC_004917.1 279091 279288 R predicted secreted protein; hypothetical protein complement(279091..279288) Helicobacter hepaticus ATCC 51449 1493338 NP_859816.1 CDS HH0285 NC_004917.1 279285 279725 R hypothetical protein complement(279285..279725) Helicobacter hepaticus ATCC 51449 1493339 NP_859817.1 CDS HH0286 NC_004917.1 279845 279973 R hypothetical protein complement(279845..279973) Helicobacter hepaticus ATCC 51449 1493340 NP_859818.1 CDS HH0287 NC_004917.1 280153 280551 R predicted membrane-associated; hypothetical protein complement(280153..280551) Helicobacter hepaticus ATCC 51449 1493341 NP_859819.1 CDS HH0288 NC_004917.1 280624 280926 R hypothetical protein complement(280624..280926) Helicobacter hepaticus ATCC 51449 1493342 NP_859820.1 CDS HH0289 NC_004917.1 280975 282777 R hypothetical protein complement(280975..282777) Helicobacter hepaticus ATCC 51449 1493343 NP_859821.1 CDS HH0290 NC_004917.1 282791 283441 R predicted secreted protein; hypothetical protein complement(282791..283441) Helicobacter hepaticus ATCC 51449 1493344 NP_859822.1 CDS HH0291 NC_004917.1 283450 284859 R hypothetical protein complement(283450..284859) Helicobacter hepaticus ATCC 51449 1493345 NP_859823.1 CDS HH0292 NC_004917.1 284856 285515 R hypothetical protein complement(284856..285515) Helicobacter hepaticus ATCC 51449 1493346 NP_859824.1 CDS HH0293 NC_004917.1 285602 286213 R predicted membrane-associated; hypothetical protein complement(285602..286213) Helicobacter hepaticus ATCC 51449 1493347 NP_859825.1 CDS HH0294 NC_004917.1 286290 288848 R predicted membrane-associated; hypothetical protein complement(286290..288848) Helicobacter hepaticus ATCC 51449 1493348 NP_859826.1 CDS HH0295 NC_004917.1 288848 289528 R predicted membrane-associated; hypothetical protein complement(288848..289528) Helicobacter hepaticus ATCC 51449 1493349 NP_859827.1 CDS HH0296 NC_004917.1 289525 290304 R predicted membrane-associated; hypothetical protein complement(289525..290304) Helicobacter hepaticus ATCC 51449 1493350 NP_859828.1 CDS HH0297 NC_004917.1 290304 290471 R hypothetical protein complement(290304..290471) Helicobacter hepaticus ATCC 51449 1493351 NP_859829.1 CDS HH0298 NC_004917.1 290468 291052 R predicted membrane-associated; hypothetical protein complement(290468..291052) Helicobacter hepaticus ATCC 51449 1493352 NP_859830.1 CDS HH0299 NC_004917.1 291049 291627 R hypothetical protein complement(291049..291627) Helicobacter hepaticus ATCC 51449 1493353 NP_859831.1 CDS HH0300 NC_004917.1 291632 292222 R predicted membrane-associated; hypothetical protein complement(291632..292222) Helicobacter hepaticus ATCC 51449 1493354 NP_859832.1 CDS HH0301 NC_004917.1 292581 293294 R predicted secreted protein; hypothetical protein complement(292581..293294) Helicobacter hepaticus ATCC 51449 1493355 NP_859833.1 CDS HH0302 NC_004917.1 293312 294244 R hypothetical protein complement(293312..294244) Helicobacter hepaticus ATCC 51449 1493356 NP_859834.1 CDS trpG NC_004917.1 294424 295005 R para-aminobenzoate synthase glutamine amidotransferase component II complement(294424..295005) Helicobacter hepaticus ATCC 51449 1493357 NP_859835.1 CDS trpE_1 NC_004917.1 295002 296852 R para-aminobenzoate synthase glutamine amidotransferase component I complement(295002..296852) Helicobacter hepaticus ATCC 51449 1493358 NP_859836.1 CDS HH0305 NC_004917.1 296981 299242 D hypothetical protein 296981..299242 Helicobacter hepaticus ATCC 51449 1493359 NP_859837.1 CDS HH0306 NC_004917.1 299258 302749 R acyl transferase; 2-acyl-glycerophospho-ethanolamine acyltransferase complement(299258..302749) Helicobacter hepaticus ATCC 51449 1493360 NP_859838.1 CDS HH0307 NC_004917.1 302805 303746 R similar to Campylobacter jejuni periplasmic protein; hypothetical protein complement(302805..303746) Helicobacter hepaticus ATCC 51449 1493361 NP_859839.1 CDS era NC_004917.1 303836 304756 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(303836..304756) Helicobacter hepaticus ATCC 51449 1493362 NP_859840.1 CDS hslU NC_004917.1 304774 306108 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(304774..306108) Helicobacter hepaticus ATCC 51449 1493363 NP_859841.1 CDS hslV NC_004917.1 306122 306664 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(306122..306664) Helicobacter hepaticus ATCC 51449 1493364 NP_859842.1 CDS rplI NC_004917.1 306679 307122 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(306679..307122) Helicobacter hepaticus ATCC 51449 1493365 NP_859843.1 CDS HH0312 NC_004917.1 307144 307872 D hypothetical protein 307144..307872 Helicobacter hepaticus ATCC 51449 1493366 NP_859844.1 CDS HH0313 NC_004917.1 307880 308833 R predicted secreted protein; hypothetical protein complement(307880..308833) Helicobacter hepaticus ATCC 51449 1493367 NP_859845.1 CDS trpD NC_004917.1 308843 310447 R bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase; TrpD; forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine; also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate; functions in tryptophan biosynthesis; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase complement(308843..310447) Helicobacter hepaticus ATCC 51449 1493368 NP_859846.1 CDS trpE_2 NC_004917.1 310451 311947 R anthranilate synthase component I complement(310451..311947) Helicobacter hepaticus ATCC 51449 1493369 NP_859847.1 CDS lolA NC_004917.1 311978 312517 R participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein complement(311978..312517) Helicobacter hepaticus ATCC 51449 1493370 NP_859848.2 CDS secA NC_004917.1 312635 315190 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 312635..315190 Helicobacter hepaticus ATCC 51449 1493371 NP_859849.1 CDS HH0318 NC_004917.1 315191 316444 D similar to Campylobacter jejuni integral membrane protein CJ0941c; hypothetical protein 315191..316444 Helicobacter hepaticus ATCC 51449 1493372 NP_859850.1 CDS HH0319 NC_004917.1 316541 316792 D possible RNA-binding protein with RRM domain; hypothetical protein 316541..316792 Helicobacter hepaticus ATCC 51449 1493373 NP_859851.1 CDS hypE NC_004917.1 316796 317803 R hydrogenase isoenzyme formation protein complement(316796..317803) Helicobacter hepaticus ATCC 51449 1493374 NP_859852.1 CDS HH0321 NC_004917.1 317822 319504 R possible helicase subunit; hypothetical protein complement(317822..319504) Helicobacter hepaticus ATCC 51449 1493375 NP_859853.1 CDS hypD NC_004917.1 319508 320650 R hydrogenase isoenzyme formation protein complement(319508..320650) Helicobacter hepaticus ATCC 51449 1493376 NP_859854.1 CDS HH0323 NC_004917.1 320643 321362 R similar to Helicobacter pylori lipopolysaccharide biosynthesis protein HP0805; hypothetical protein complement(320643..321362) Helicobacter hepaticus ATCC 51449 1493377 NP_859855.1 CDS hypC NC_004917.1 321410 321670 R hydrogenase isoenzyme formation protein HypC complement(321410..321670) Helicobacter hepaticus ATCC 51449 1493378 NP_859856.1 CDS hypB NC_004917.1 321680 322408 R hydrogenase expression/formation protein HypB complement(321680..322408) Helicobacter hepaticus ATCC 51449 1493379 NP_859857.1 CDS hypF NC_004917.1 322389 324812 R transcriptional regulatory protein HypF complement(322389..324812) Helicobacter hepaticus ATCC 51449 1493380 NP_859858.1 CDS pgk NC_004917.1 324933 326141 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 324933..326141 Helicobacter hepaticus ATCC 51449 1493381 NP_859859.1 CDS HH0328 NC_004917.1 326141 326944 D similar to Campylobacter jejuni CJ1113; hypothetical protein 326141..326944 Helicobacter hepaticus ATCC 51449 1493382 NP_859860.1 CDS HH0329 NC_004917.1 327008 327319 D may become fused with HH0330 due to slipped strand mispairing; hypothetical protein 327008..327319 Helicobacter hepaticus ATCC 51449 1493383 NP_859861.1 CDS HH0330 NC_004917.1 327409 327855 D may become fused with HH0329 due to slipped strand mispairing; hypothetical protein 327409..327855 Helicobacter hepaticus ATCC 51449 1493384 NP_859862.1 CDS panD NC_004917.1 327821 328333 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 327821..328333 Helicobacter hepaticus ATCC 51449 1493385 NP_859863.1 CDS ybaB NC_004917.1 328336 328662 D similar to Campylobacter jejuni CJ1642; hypothetical protein 328336..328662 Helicobacter hepaticus ATCC 51449 1493386 NP_859864.1 CDS HH0333 NC_004917.1 328655 329722 D similar to Helicobacter pylori HP0036; predicted secreted protein; hypothetical protein 328655..329722 Helicobacter hepaticus ATCC 51449 1493387 NP_859865.1 CDS ispA NC_004917.1 329731 330597 D geranyltranstransferase 329731..330597 Helicobacter hepaticus ATCC 51449 1493388 NP_859866.1 CDS surE NC_004917.1 330594 331388 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 330594..331388 Helicobacter hepaticus ATCC 51449 1493389 NP_859867.1 CDS HH0336 NC_004917.1 331367 332068 D similar to Helicobacter pylori JHP0692; MoeB/ThiF family; hypothetical protein 331367..332068 Helicobacter hepaticus ATCC 51449 1493390 NP_859868.1 CDS HH0337 NC_004917.1 332069 332203 D similar to Helicobacter pylori JHP0693; hypothetical protein 332069..332203 Helicobacter hepaticus ATCC 51449 1493391 NP_859869.1 CDS HH0338 NC_004917.1 332213 333103 D similar to Campylobacter jejuni hydrolase CJ0947c; hypothetical protein 332213..333103 Helicobacter hepaticus ATCC 51449 1493392 NP_859870.1 CDS HH0339 NC_004917.1 333211 333648 D similar to Pseudomonas aeruginosa PA4578; predicted secreted protein; hypothetical protein 333211..333648 Helicobacter hepaticus ATCC 51449 1493393 NP_859871.1 CDS HH0340 NC_004917.1 333898 335715 D similar to Pseudomonas aeruginosa PA4579; hypothetical protein 333898..335715 Helicobacter hepaticus ATCC 51449 1493394 NP_859872.1 CDS HH0341 NC_004917.1 335719 336285 R similar to Campylobacter jejuni CJ1254; hypothetical protein complement(335719..336285) Helicobacter hepaticus ATCC 51449 1493395 NP_859873.1 CDS HH0342 NC_004917.1 336269 336652 R predicted membrane-associated; hypothetical protein complement(336269..336652) Helicobacter hepaticus ATCC 51449 1493396 NP_859874.1 CDS HH0343 NC_004917.1 336655 336819 R predicted secreted protein; hypothetical protein complement(336655..336819) Helicobacter hepaticus ATCC 51449 1493397 NP_859875.1 CDS HH0344 NC_004917.1 336719 336928 D predicted membrane-associated; hypothetical protein 336719..336928 Helicobacter hepaticus ATCC 51449 1493398 NP_859876.1 CDS glnP NC_004917.1 336946 337605 D glutamine ABC transporter permease GlnP 336946..337605 Helicobacter hepaticus ATCC 51449 1493399 NP_859877.1 CDS HH0346 NC_004917.1 337653 338261 D similar to amino acid ABC transporter permeases; hypothetical protein 337653..338261 Helicobacter hepaticus ATCC 51449 1493400 NP_859878.1 CDS glnQ_1 NC_004917.1 338258 339010 D similar to amino acid ABC transporter ATP binding components; hypothetical protein 338258..339010 Helicobacter hepaticus ATCC 51449 1493401 NP_859879.1 CDS HH0348 NC_004917.1 339007 339528 R hypothetical protein complement(339007..339528) Helicobacter hepaticus ATCC 51449 1493402 NP_859880.1 CDS HH0349 NC_004917.1 339643 340623 R predicted secreted protein; hypothetical protein complement(339643..340623) Helicobacter hepaticus ATCC 51449 1493403 NP_859881.1 CDS HH0350 NC_004917.1 340626 340967 R similar to Helicobacter pylori HP1414; hypothetical protein complement(340626..340967) Helicobacter hepaticus ATCC 51449 1493404 NP_859882.1 CDS HH0351 NC_004917.1 340997 341653 R similar to Helicobacter pylori HP1337; hypothetical protein complement(340997..341653) Helicobacter hepaticus ATCC 51449 1493405 NP_859883.1 CDS HH0352 NC_004917.1 341634 342065 R Inhibits transcription at high concentrations of nickel; nickel responsive regulator complement(341634..342065) Helicobacter hepaticus ATCC 51449 1493406 NP_859884.1 CDS HH0353 NC_004917.1 342217 342654 D ExbB-like; biopolymer transport protein 342217..342654 Helicobacter hepaticus ATCC 51449 1493407 NP_859885.1 CDS HH0354 NC_004917.1 342657 343037 D ExbD-like; biopolymer transport protein 342657..343037 Helicobacter hepaticus ATCC 51449 1493408 NP_859886.1 CDS HH0355 NC_004917.1 343003 343731 D TonB-like protein 343003..343731 Helicobacter hepaticus ATCC 51449 1493409 NP_859887.1 CDS HH0356 NC_004917.1 343753 344163 R hypothetical protein complement(343753..344163) Helicobacter hepaticus ATCC 51449 1493410 NP_859888.1 CDS HH0357 NC_004917.1 344219 344506 R predicted secreted protein; hypothetical protein complement(344219..344506) Helicobacter hepaticus ATCC 51449 1493411 NP_859889.1 CDS fusA NC_004917.1 344510 346588 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(344510..346588) Helicobacter hepaticus ATCC 51449 1493412 NP_859890.1 CDS rpsG NC_004917.1 346604 347071 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(346604..347071) Helicobacter hepaticus ATCC 51449 1493413 NP_859891.1 CDS rpsL NC_004917.1 347087 347476 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(347087..347476) Helicobacter hepaticus ATCC 51449 1493414 NP_859892.1 CDS rpoB NC_004917.1 347568 356252 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; fusion of rpoB and rpoC; beta and beta' subunits are part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta/beta' complement(347568..356252) Helicobacter hepaticus ATCC 51449 1493415 NP_859893.1 CDS rplL NC_004917.1 356400 356780 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(356400..356780) Helicobacter hepaticus ATCC 51449 1493416 NP_859894.1 CDS rplJ NC_004917.1 356801 357283 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(356801..357283) Helicobacter hepaticus ATCC 51449 1493417 NP_859895.1 CDS rplA NC_004917.1 357374 358078 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(357374..358078) Helicobacter hepaticus ATCC 51449 1493418 NP_859896.1 CDS rplK NC_004917.1 358095 358520 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(358095..358520) Helicobacter hepaticus ATCC 51449 1493419 NP_859897.1 CDS nusG NC_004917.1 358550 359065 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(358550..359065) Helicobacter hepaticus ATCC 51449 1493420 NP_859898.1 CDS secE NC_004917.1 359086 359268 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(359086..359268) Helicobacter hepaticus ATCC 51449 1493421 NP_859899.1 CDS rpmG NC_004917.1 359396 359566 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(359396..359566) Helicobacter hepaticus ATCC 51449 1493422 NP_859900.1 CDS tuf NC_004917.1 359581 360780 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(359581..360780) Helicobacter hepaticus ATCC 51449 1493423 NP_859901.1 CDS HH0370 NC_004917.1 361949 362437 D predicted membrane-associated; hypothetical protein 361949..362437 Helicobacter hepaticus ATCC 51449 1493424 NP_859902.1 CDS HH0371 NC_004917.1 362976 363089 D hypothetical protein 362976..363089 Helicobacter hepaticus ATCC 51449 1493425 NP_859903.1 CDS HH0372 NC_004917.1 363192 364349 D similar to Helicobacter pylori HP0624; predicted aminotransferase; hypothetical protein 363192..364349 Helicobacter hepaticus ATCC 51449 1493426 NP_859904.1 CDS murC NC_004917.1 364346 365665 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 364346..365665 Helicobacter hepaticus ATCC 51449 1493427 NP_859905.1 CDS HH0374 NC_004917.1 365665 366117 D predicted membrane-associated; hypothetical protein 365665..366117 Helicobacter hepaticus ATCC 51449 1493428 NP_859906.1 CDS mutS NC_004917.1 366104 368326 D MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 366104..368326 Helicobacter hepaticus ATCC 51449 1493429 NP_859907.1 CDS HH0376 NC_004917.1 368393 369136 D predicted membrane-associated; hypothetical protein 368393..369136 Helicobacter hepaticus ATCC 51449 1493430 NP_859908.1 CDS HH0377 NC_004917.1 369136 369429 D hypothetical protein 369136..369429 Helicobacter hepaticus ATCC 51449 1493431 NP_859909.1 CDS HH0378 NC_004917.1 369445 369915 R similar to Campylobacter jejuni CJ0904c; rRNA methylase (SpoU class) complement(369445..369915) Helicobacter hepaticus ATCC 51449 1493432 NP_859910.1 CDS dcuA NC_004917.1 370065 371639 D functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 370065..371639 Helicobacter hepaticus ATCC 51449 1493433 NP_859911.1 CDS galE NC_004917.1 371691 372728 D UDP-glucose 4-epimerase 371691..372728 Helicobacter hepaticus ATCC 51449 1493434 NP_859912.1 CDS HH0381 NC_004917.1 372745 373503 D predicted secreted protein; hypothetical protein 372745..373503 Helicobacter hepaticus ATCC 51449 1493435 NP_859913.1 CDS HH0382 NC_004917.1 373514 374521 D hypothetical protein 373514..374521 Helicobacter hepaticus ATCC 51449 1493436 NP_859914.1 CDS HH0383 NC_004917.1 374548 375921 D hypothetical protein 374548..375921 Helicobacter hepaticus ATCC 51449 1493437 NP_859915.1 CDS HH0384 NC_004917.1 376094 376621 D hypothetical protein 376094..376621 Helicobacter hepaticus ATCC 51449 1493438 NP_859916.1 CDS HH0385 NC_004917.1 376621 377163 D predicted membrane-associated; hypothetical protein 376621..377163 Helicobacter hepaticus ATCC 51449 1493439 NP_859917.1 CDS HH0386 NC_004917.1 377153 377800 D hypothetical protein 377153..377800 Helicobacter hepaticus ATCC 51449 1493440 NP_859918.1 CDS HH0387 NC_004917.1 377800 378363 D predicted membrane-associated; hypothetical protein 377800..378363 Helicobacter hepaticus ATCC 51449 1493441 NP_859919.1 CDS HH0388 NC_004917.1 378353 378733 D hypothetical protein 378353..378733 Helicobacter hepaticus ATCC 51449 1493442 NP_859920.1 CDS HH0389 NC_004917.1 378733 379086 D predicted membrane-associated; hypothetical protein 378733..379086 Helicobacter hepaticus ATCC 51449 1493443 NP_859921.1 CDS HH0390 NC_004917.1 379101 379646 D hypothetical protein 379101..379646 Helicobacter hepaticus ATCC 51449 1493444 NP_859922.1 CDS HH0391 NC_004917.1 379627 380208 D predicted membrane-associated; hypothetical protein 379627..380208 Helicobacter hepaticus ATCC 51449 1493445 NP_859923.1 CDS HH0392 NC_004917.1 380201 380680 D hypothetical protein 380201..380680 Helicobacter hepaticus ATCC 51449 1493446 NP_859924.1 CDS HH0393 NC_004917.1 380691 381185 D predicted membrane-associated; hypothetical protein 380691..381185 Helicobacter hepaticus ATCC 51449 1493447 NP_859925.1 CDS HH0394 NC_004917.1 381160 381522 D hypothetical protein 381160..381522 Helicobacter hepaticus ATCC 51449 1493448 NP_859926.1 CDS HH0395 NC_004917.1 381504 382451 R hypothetical protein complement(381504..382451) Helicobacter hepaticus ATCC 51449 1493449 NP_859927.1 CDS acoE NC_004917.1 382630 384531 D acetyl-CoA synthetase 382630..384531 Helicobacter hepaticus ATCC 51449 1493450 NP_859928.1 CDS prpB NC_004917.1 384535 385410 D catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 384535..385410 Helicobacter hepaticus ATCC 51449 1493451 NP_859929.1 CDS prpC NC_004917.1 385421 386569 D involved in propionate metabolism; citrate synthase PrpC 385421..386569 Helicobacter hepaticus ATCC 51449 1493452 NP_859930.1 CDS prpD NC_004917.1 386603 388060 D functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 386603..388060 Helicobacter hepaticus ATCC 51449 1493453 NP_859931.1 CDS HH0400 NC_004917.1 388108 388623 D hypothetical protein 388108..388623 Helicobacter hepaticus ATCC 51449 1493454 NP_859932.1 CDS HH0401 NC_004917.1 388738 389253 R hypothetical protein complement(388738..389253) Helicobacter hepaticus ATCC 51449 1493455 NP_859933.1 CDS HH0402 NC_004917.1 389536 389691 R hypothetical protein complement(389536..389691) Helicobacter hepaticus ATCC 51449 1493456 NP_859934.1 CDS HH0403 NC_004917.1 389688 390569 R predicted membrane-associated; hypothetical protein complement(389688..390569) Helicobacter hepaticus ATCC 51449 1493457 NP_859935.1 CDS HH0404 NC_004917.1 390631 390990 R predicted membrane-associated; hypothetical protein complement(390631..390990) Helicobacter hepaticus ATCC 51449 1493458 NP_859936.1 CDS HH0405 NC_004917.1 391029 391439 R similar to Campylobacter jejuni acid periplasmic protein CJ0424; hypothetical protein complement(391029..391439) Helicobacter hepaticus ATCC 51449 1493459 NP_859937.1 CDS HH0406 NC_004917.1 391621 391866 D predicted membrane-associated; hypothetical protein 391621..391866 Helicobacter hepaticus ATCC 51449 1493460 NP_859938.1 CDS ureA NC_004917.1 391929 392606 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureA(alpha) and 3 ureB (beta) subunits; urease subunit alpha 391929..392606 Helicobacter hepaticus ATCC 51449 1493461 NP_859939.1 CDS ureB NC_004917.1 392628 394337 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureA(alpha) and 3 ureB (beta) subunits; urease subunit beta 392628..394337 Helicobacter hepaticus ATCC 51449 1493462 NP_859940.1 CDS ureI NC_004917.1 394347 394859 D urease accessory protein UreI 394347..394859 Helicobacter hepaticus ATCC 51449 1493463 NP_859941.2 CDS ureE NC_004917.1 394859 395383 D involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 394859..395383 Helicobacter hepaticus ATCC 51449 1493464 NP_859942.1 CDS ureF NC_004917.1 395380 396042 D urease accessory protein UreF 395380..396042 Helicobacter hepaticus ATCC 51449 1493465 NP_859943.1 CDS ureG NC_004917.1 396053 396655 D urease/hydrogenase-associated GTPase UreG 396053..396655 Helicobacter hepaticus ATCC 51449 1493466 NP_859944.1 CDS ureH NC_004917.1 396730 397410 D urease accessory protein UreH 396730..397410 Helicobacter hepaticus ATCC 51449 1493467 NP_859945.1 CDS nikE NC_004917.1 397413 398126 R nickel transport ATP-binding protein NikE complement(397413..398126) Helicobacter hepaticus ATCC 51449 1493468 NP_859946.1 CDS nikD NC_004917.1 398120 399787 R nickel transport permease component NikD complement(398120..399787) Helicobacter hepaticus ATCC 51449 1493469 NP_859947.1 CDS nikB NC_004917.1 399784 400680 R nickel transport system permease NikB complement(399784..400680) Helicobacter hepaticus ATCC 51449 1493470 NP_859948.1 CDS nikA NC_004917.1 400797 402362 R nickel transport system periplasmic component NikA complement(400797..402362) Helicobacter hepaticus ATCC 51449 1493471 NP_859949.1 CDS HH0418 NC_004917.1 402505 404679 D similar to Pseudomonas aeruginosa outer membrane hemin receptor; hypothetical protein 402505..404679 Helicobacter hepaticus ATCC 51449 1493472 NP_859950.1 CDS proB NC_004917.1 404743 405537 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 404743..405537 Helicobacter hepaticus ATCC 51449 1493473 NP_859951.1 CDS fmt NC_004917.1 405498 406448 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 405498..406448 Helicobacter hepaticus ATCC 51449 1493474 NP_859952.1 CDS birA NC_004917.1 406464 407183 D catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 406464..407183 Helicobacter hepaticus ATCC 51449 1493475 NP_859953.1 CDS parA NC_004917.1 407194 407979 D chromosome partitioning ATPase ParA 407194..407979 Helicobacter hepaticus ATCC 51449 1493476 NP_859954.1 CDS parB NC_004917.1 407985 408857 D transcriptional regulator involved in chromosome partitioning ParB 407985..408857 Helicobacter hepaticus ATCC 51449 1493477 NP_859955.1 CDS atpF NC_004917.1 408934 409359 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; ATP synthase F0F1 subunit B' 408934..409359 Helicobacter hepaticus ATCC 51449 1493478 NP_859956.1 CDS atpF' NC_004917.1 409369 409884 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 409369..409884 Helicobacter hepaticus ATCC 51449 1493479 NP_859957.1 CDS atpH NC_004917.1 409884 410408 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 409884..410408 Helicobacter hepaticus ATCC 51449 1493480 NP_859958.1 CDS atpA NC_004917.1 410430 411944 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 410430..411944 Helicobacter hepaticus ATCC 51449 1493481 NP_859959.1 CDS atpG NC_004917.1 411957 412850 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 411957..412850 Helicobacter hepaticus ATCC 51449 1493482 NP_859960.1 CDS atpD NC_004917.1 412869 414269 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 412869..414269 Helicobacter hepaticus ATCC 51449 1493483 NP_859961.1 CDS atpC NC_004917.1 414278 414673 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 414278..414673 Helicobacter hepaticus ATCC 51449 1493484 NP_859962.1 CDS HH0431 NC_004917.1 414683 415246 D ExbB-like; biopolymer transport protein 414683..415246 Helicobacter hepaticus ATCC 51449 1493485 NP_859963.1 CDS HH0432 NC_004917.1 415254 415649 D biopolymer transport protein ExbD-like 415254..415649 Helicobacter hepaticus ATCC 51449 1493486 NP_859964.1 CDS HH0433 NC_004917.1 415651 416343 D similar to Helicobacter pylori HP1127; predicted secreted protein; hypothetical protein 415651..416343 Helicobacter hepaticus ATCC 51449 1493487 NP_859965.1 CDS tolB NC_004917.1 416353 417612 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 416353..417612 Helicobacter hepaticus ATCC 51449 1493488 NP_859966.1 CDS HH0435 NC_004917.1 417669 418130 D MotB-family; hypothetical protein 417669..418130 Helicobacter hepaticus ATCC 51449 1493489 NP_859967.1 CDS HH0436 NC_004917.1 418154 418999 D similar to Helicobacter pylori HP1124; predicted secreted protein; hypothetical protein 418154..418999 Helicobacter hepaticus ATCC 51449 1493490 NP_859968.1 CDS slyD NC_004917.1 418996 419550 D rotamase; FKBP-type peptidylprolyl isomerase 418996..419550 Helicobacter hepaticus ATCC 51449 1493491 NP_859969.1 CDS fliQ NC_004917.1 419734 420000 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 419734..420000 Helicobacter hepaticus ATCC 51449 1493492 NP_859970.1 CDS murB NC_004917.1 420004 420795 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 420004..420795 Helicobacter hepaticus ATCC 51449 1493493 NP_859971.1 CDS secG NC_004917.1 421336 421734 D preprotein translocase subunit SecG 421336..421734 Helicobacter hepaticus ATCC 51449 1493494 NP_859972.1 CDS frr NC_004917.1 421749 422306 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 421749..422306 Helicobacter hepaticus ATCC 51449 1493495 NP_859973.1 CDS thrS NC_004917.1 422309 424123 D catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 422309..424123 Helicobacter hepaticus ATCC 51449 1493496 NP_859974.1 CDS infC NC_004917.1 424120 424644 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 424120..424644 Helicobacter hepaticus ATCC 51449 1493497 NP_859975.2 CDS rpmI NC_004917.1 424667 424861 D 50S ribosomal protein L35 424667..424861 Helicobacter hepaticus ATCC 51449 1493498 NP_859976.1 CDS rplT NC_004917.1 424944 425297 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 424944..425297 Helicobacter hepaticus ATCC 51449 1493499 NP_859977.1 CDS HH0446 NC_004917.1 425458 426615 D similar to Helicobacter pylori HP1044; predicted membrane-associated; hypothetical protein 425458..426615 Helicobacter hepaticus ATCC 51449 1493500 NP_859978.1 CDS HH0447 NC_004917.1 426584 427249 R hypothetical protein complement(426584..427249) Helicobacter hepaticus ATCC 51449 1493501 NP_859979.1 CDS HH0448 NC_004917.1 427246 427419 R predicted membrane-associated; hypothetical protein complement(427246..427419) Helicobacter hepaticus ATCC 51449 1493502 NP_859980.1 CDS hisI NC_004917.1 427434 428129 R phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP pyrophosphohydrolase complement(427434..428129) Helicobacter hepaticus ATCC 51449 1493503 NP_859981.1 CDS HH0450 NC_004917.1 428134 429231 R similar to Helicobacter pylori JHP0233; predicted membrane-associated; hypothetical protein complement(428134..429231) Helicobacter hepaticus ATCC 51449 1493504 NP_859982.1 CDS ilvE NC_004917.1 429233 430165 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(429233..430165) Helicobacter hepaticus ATCC 51449 1493505 NP_859983.1 CDS HH0452 NC_004917.1 430298 431770 R similar to Campylobacter jejuni CJ1249; hypothetical protein complement(430298..431770) Helicobacter hepaticus ATCC 51449 1493506 NP_859984.1 CDS ftsK NC_004917.1 432151 434976 D DNA translocase FtsK 432151..434976 Helicobacter hepaticus ATCC 51449 1493507 NP_859985.1 CDS htrA NC_004917.1 435032 436465 D similar to Campylobacter jejuni HtrA; serine protease 435032..436465 Helicobacter hepaticus ATCC 51449 1493508 NP_859986.1 CDS cheR NC_004917.1 436487 437323 D chemotaxis protein CheR 436487..437323 Helicobacter hepaticus ATCC 51449 1493509 NP_859987.1 CDS cheB NC_004917.1 437327 438040 D chemotaxis protein methylesterase CheB 437327..438040 Helicobacter hepaticus ATCC 51449 1493510 NP_859988.1 CDS HH0457 NC_004917.1 438246 438494 R similar to Helicobacter pylori HP1436; predicted membrane-associated; hypothetical protein complement(438246..438494) Helicobacter hepaticus ATCC 51449 1493511 NP_859989.1 CDS mfd NC_004917.1 438504 441509 R transcription-repair coupling factor complement(438504..441509) Helicobacter hepaticus ATCC 51449 1493512 NP_859990.1 CDS HH0459 NC_004917.1 441536 441955 R similar to Helicobacter pylori HP1542; hypothetical protein complement(441536..441955) Helicobacter hepaticus ATCC 51449 1493513 NP_859991.1 CDS HH0460 NC_004917.1 441913 442812 R similar to Helicobacter pylori HP1543; membrane proteins related to metalloendopeptidase complement(441913..442812) Helicobacter hepaticus ATCC 51449 1493514 NP_859992.1 CDS tagE NC_004917.1 442816 443691 R similar to Vibrio cholerae TagE (VC0843); hypothetical protein complement(442816..443691) Helicobacter hepaticus ATCC 51449 1493515 NP_859993.1 CDS folC NC_004917.1 443692 444900 R folylpolyglutamate synthase complement(443692..444900) Helicobacter hepaticus ATCC 51449 1493516 NP_859994.1 CDS HH0463 NC_004917.1 444897 445931 R hypothetical protein complement(444897..445931) Helicobacter hepaticus ATCC 51449 1493517 NP_859995.1 CDS HH0464 NC_004917.1 445906 446418 R similar to Helicobacter pylori HP1546; hypothetical protein complement(445906..446418) Helicobacter hepaticus ATCC 51449 1493518 NP_859996.1 CDS leuS NC_004917.1 446418 448910 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(446418..448910) Helicobacter hepaticus ATCC 51449 1493519 NP_859997.1 CDS alr NC_004917.1 449135 450376 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 449135..450376 Helicobacter hepaticus ATCC 51449 1493520 NP_859998.1 CDS flhA NC_004917.1 450486 452693 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 450486..452693 Helicobacter hepaticus ATCC 51449 1493521 NP_859999.1 CDS HH0468 NC_004917.1 452702 453829 D similar to Helicobacter pylori HP1042; hypothetical protein 452702..453829 Helicobacter hepaticus ATCC 51449 1493522 NP_860000.1 CDS HH0469 NC_004917.1 453826 454095 D hypothetical protein 453826..454095 Helicobacter hepaticus ATCC 51449 1493523 NP_860001.1 CDS purN NC_004917.1 454156 454731 D GAR transformylase PurN 454156..454731 Helicobacter hepaticus ATCC 51449 1493524 NP_860002.1 CDS kefB_1 NC_004917.1 454728 455912 D similar to Helicobacter pylori ion-channel HP1183; hypothetical protein 454728..455912 Helicobacter hepaticus ATCC 51449 1493525 NP_860003.1 CDS HH0472 NC_004917.1 455912 457309 D similar to Campylobacter jejuni CJ0601c; SNF family sodium-dependent transporter 455912..457309 Helicobacter hepaticus ATCC 51449 1493526 NP_860004.1 CDS HH0473 NC_004917.1 457376 459151 D similar to Helicobacter pylori HP1252; periplasmic binding component of ABC-type transport system 457376..459151 Helicobacter hepaticus ATCC 51449 1493527 NP_860005.1 CDS HH0474 NC_004917.1 459280 461037 D similar to Campylobacter jejuni CJ0377; ATPase 459280..461037 Helicobacter hepaticus ATCC 51449 1493528 NP_860006.1 CDS HH0475 NC_004917.1 461338 461649 D predicted secreted protein; hypothetical protein 461338..461649 Helicobacter hepaticus ATCC 51449 1493529 NP_860007.1 CDS HH0476 NC_004917.1 461646 462074 D predicted secreted protein; hypothetical protein 461646..462074 Helicobacter hepaticus ATCC 51449 1493530 NP_860008.1 CDS HH0477 NC_004917.1 462353 462679 D hypothetical protein 462353..462679 Helicobacter hepaticus ATCC 51449 1493531 NP_860009.1 CDS HH0478 NC_004917.1 462752 463801 D similar to Helicobacter pylori HP1079; ATPase 462752..463801 Helicobacter hepaticus ATCC 51449 1493532 NP_860010.1 CDS HH0479 NC_004917.1 464216 464359 D hypothetical protein 464216..464359 Helicobacter hepaticus ATCC 51449 1493533 NP_860011.1 CDS HH0480 NC_004917.1 464383 464481 D hypothetical protein 464383..464481 Helicobacter hepaticus ATCC 51449 1493534 NP_860012.1 CDS HH0481 NC_004917.1 464452 466539 R similar to methyl-accepting chemotaxis proteins; similar to Campylobacter jejuni CJ1506c; hypothetical protein complement(464452..466539) Helicobacter hepaticus ATCC 51449 1493535 NP_860013.1 CDS HH0482 NC_004917.1 466710 467774 D similar to Helicobacter pylori HP1321; ATPase 466710..467774 Helicobacter hepaticus ATCC 51449 1493536 NP_860014.2 CDS purH NC_004917.1 467785 469320 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(467785..469320) Helicobacter hepaticus ATCC 51449 1493537 NP_860015.1 CDS HH0484 NC_004917.1 469382 470260 D similar to Campylobacter jejuni CJ1132c; hypothetical protein 469382..470260 Helicobacter hepaticus ATCC 51449 1493538 NP_860016.1 CDS hisH NC_004917.1 470499 471152 D glutamine amidotransferase HisH 470499..471152 Helicobacter hepaticus ATCC 51449 1493539 NP_860017.1 CDS trxB_1 NC_004917.1 471235 472170 D thioredoxin reductase 471235..472170 Helicobacter hepaticus ATCC 51449 1493540 NP_860018.1 CDS dapB NC_004917.1 472213 472980 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 472213..472980 Helicobacter hepaticus ATCC 51449 1493541 NP_860019.1 CDS purF NC_004917.1 473048 474472 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 473048..474472 Helicobacter hepaticus ATCC 51449 1493542 NP_860020.1 CDS HH0489 NC_004917.1 474482 475444 D similar to Escherichia coli YhcC; hypothetical protein 474482..475444 Helicobacter hepaticus ATCC 51449 1493543 NP_860021.1 CDS HH0490 NC_004917.1 475476 476339 R similar to Helicobacter pylori periplasmic protein; hypothetical protein complement(475476..476339) Helicobacter hepaticus ATCC 51449 1493544 NP_860022.1 CDS pgi NC_004917.1 476357 477607 R catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase complement(476357..477607) Helicobacter hepaticus ATCC 51449 1493545 NP_860023.1 CDS gap_2 NC_004917.1 477614 478597 R catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase complement(477614..478597) Helicobacter hepaticus ATCC 51449 1493546 NP_860024.1 CDS HH0493 NC_004917.1 478612 478719 R hypothetical protein complement(478612..478719) Helicobacter hepaticus ATCC 51449 1493547 NP_860025.1 CDS HH0494 NC_004917.1 478824 479723 R hypothetical protein complement(478824..479723) Helicobacter hepaticus ATCC 51449 1493548 NP_860026.1 CDS ppk NC_004917.1 479804 481897 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(479804..481897) Helicobacter hepaticus ATCC 51449 1493549 NP_860027.1 CDS HH0496 NC_004917.1 482101 482613 D predicted secreted protein; hypothetical protein 482101..482613 Helicobacter hepaticus ATCC 51449 1493550 NP_860028.1 CDS yigC NC_004917.1 482701 484545 D similar to Campylobacter jejuni CJ0546; hypothetical protein 482701..484545 Helicobacter hepaticus ATCC 51449 1493551 NP_860029.1 CDS rplM NC_004917.1 484628 485056 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 484628..485056 Helicobacter hepaticus ATCC 51449 1493552 NP_860030.1 CDS rpsI NC_004917.1 485065 485454 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 485065..485454 Helicobacter hepaticus ATCC 51449 1493553 NP_860031.1 CDS ycbL NC_004917.1 485552 486085 D similar to Campylobacter jejuni CJ0809c; hydrolase 485552..486085 Helicobacter hepaticus ATCC 51449 1493554 NP_860032.1 CDS motA NC_004917.1 486136 486906 D With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 486136..486906 Helicobacter hepaticus ATCC 51449 1493555 NP_860033.1 CDS motB NC_004917.1 486926 487681 D with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 486926..487681 Helicobacter hepaticus ATCC 51449 1493556 NP_860034.1 CDS HH0503 NC_004917.1 487742 487864 D may become fused with HH0504 due to slipped strand mispairing; hypothetical protein 487742..487864 Helicobacter hepaticus ATCC 51449 1493557 NP_860035.1 CDS HH0504 NC_004917.1 487930 488166 D may become fused with HH0503 due to slipped strand mispairing; hypothetical protein 487930..488166 Helicobacter hepaticus ATCC 51449 1493558 NP_860036.1 CDS HH0505 NC_004917.1 488422 488631 D predicted membrane-associated; hypothetical protein 488422..488631 Helicobacter hepaticus ATCC 51449 1493559 NP_860037.1 CDS ruvB NC_004917.1 488672 489682 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(488672..489682) Helicobacter hepaticus ATCC 51449 1493560 NP_860038.1 CDS panB NC_004917.1 489763 490557 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(489763..490557) Helicobacter hepaticus ATCC 51449 1493561 NP_860039.1 CDS HH0508 NC_004917.1 490584 490904 R similar to Campylobacter jejuni CJ1174; efflux protein complement(490584..490904) Helicobacter hepaticus ATCC 51449 1493562 NP_860040.1 CDS HH0509 NC_004917.1 490905 491261 R efflux protein complement(490905..491261) Helicobacter hepaticus ATCC 51449 1493563 NP_860041.1 CDS lgt NC_004917.1 491258 492136 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(491258..492136) Helicobacter hepaticus ATCC 51449 1493564 NP_860042.1 CDS HH0511 NC_004917.1 492139 492459 R hypothetical protein complement(492139..492459) Helicobacter hepaticus ATCC 51449 1493565 NP_860043.1 CDS HH0512 NC_004917.1 492519 492995 R hypothetical protein complement(492519..492995) Helicobacter hepaticus ATCC 51449 1493566 NP_860044.1 CDS HH0513 NC_004917.1 493011 494609 R similar to methyl-accepting chemotaxis proteins; hypothetical protein complement(493011..494609) Helicobacter hepaticus ATCC 51449 1493567 NP_860045.1 CDS ruvA NC_004917.1 494637 495227 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(494637..495227) Helicobacter hepaticus ATCC 51449 1493568 NP_860046.1 CDS HH0515 NC_004917.1 495283 497139 R hypothetical protein complement(495283..497139) Helicobacter hepaticus ATCC 51449 1493569 NP_860047.1 CDS HH0516 NC_004917.1 497317 498699 D similar to Escherichia coli MviN; predicted membrane-associated; hypothetical protein 497317..498699 Helicobacter hepaticus ATCC 51449 1493570 NP_860048.1 CDS cysS NC_004917.1 498696 500162 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 498696..500162 Helicobacter hepaticus ATCC 51449 1493571 NP_860049.1 CDS ribF NC_004917.1 500164 501024 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(500164..501024) Helicobacter hepaticus ATCC 51449 1493572 NP_860050.1 CDS HH0519 NC_004917.1 500993 501718 R similar to Helicobacter pylori HP1086; hypothetical protein complement(500993..501718) Helicobacter hepaticus ATCC 51449 1493573 NP_860051.1 CDS HH0520 NC_004917.1 501727 502242 R hypothetical protein complement(501727..502242) Helicobacter hepaticus ATCC 51449 1493574 NP_860052.1 CDS pyrB NC_004917.1 502410 503303 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 502410..503303 Helicobacter hepaticus ATCC 51449 1493575 NP_860053.1 CDS HH0522 NC_004917.1 503427 504737 D similar to Helicobacter pylori HP1083; predicted secreted protein; hypothetical protein 503427..504737 Helicobacter hepaticus ATCC 51449 1493576 NP_860054.1 CDS cdsA NC_004917.1 504844 505698 D CDP-diglyceride synthetase CdsA 504844..505698 Helicobacter hepaticus ATCC 51449 1493577 NP_860055.1 CDS dxr NC_004917.1 505702 506811 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 505702..506811 Helicobacter hepaticus ATCC 51449 1493578 NP_860056.1 CDS HH0525 NC_004917.1 506966 507604 D similar to Helicobacter pylori Hop-family proteins; hypothetical protein 506966..507604 Helicobacter hepaticus ATCC 51449 1493579 NP_860057.1 CDS HH0526 NC_004917.1 507605 507700 D hypothetical protein 507605..507700 Helicobacter hepaticus ATCC 51449 1493580 NP_860058.1 CDS thrC NC_004917.1 507717 509261 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 507717..509261 Helicobacter hepaticus ATCC 51449 1493581 NP_860059.1 CDS purE NC_004917.1 509346 509840 D Catalyzes a step in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase catalytic subunit 509346..509840 Helicobacter hepaticus ATCC 51449 1493582 NP_860060.1 CDS HH0529 NC_004917.1 509850 510332 D similar to Campylobacter jejuni Cj0703; hypothetical protein 509850..510332 Helicobacter hepaticus ATCC 51449 1493583 NP_860061.1 CDS HH0530 NC_004917.1 510329 511249 D similar to Campylobacter jejuni CJ0703; hypothetical protein 510329..511249 Helicobacter hepaticus ATCC 51449 1493584 NP_860062.1 CDS glyQ NC_004917.1 511258 512154 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 511258..512154 Helicobacter hepaticus ATCC 51449 1493585 NP_860063.1 CDS HH0532 NC_004917.1 512154 514208 D similar to Campylobacter jejuni periplasmic protein; hypothetical protein 512154..514208 Helicobacter hepaticus ATCC 51449 1493586 NP_860064.1 CDS HH0533 NC_004917.1 514218 514904 D hypothetical protein 514218..514904 Helicobacter hepaticus ATCC 51449 1493587 NP_860065.1 CDS HH0534 NC_004917.1 515008 516852 D predicted ribonuclease; similar to Helicobacter pylori HP1248; hypothetical protein 515008..516852 Helicobacter hepaticus ATCC 51449 1493588 NP_860066.1 CDS HH0535 NC_004917.1 517329 518339 D required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 517329..518339 Helicobacter hepaticus ATCC 51449 1493589 NP_860067.1 CDS rpsF NC_004917.1 518434 518847 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 518434..518847 Helicobacter hepaticus ATCC 51449 1493590 NP_860068.1 CDS ssb NC_004917.1 518865 519377 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 518865..519377 Helicobacter hepaticus ATCC 51449 1493591 NP_860069.2 CDS rpsR NC_004917.1 519396 519650 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 519396..519650 Helicobacter hepaticus ATCC 51449 1493592 NP_860070.1 CDS HH0539 NC_004917.1 519753 521816 D predicted membrane-associated; hypothetical protein 519753..521816 Helicobacter hepaticus ATCC 51449 1493593 NP_860071.1 CDS HH0540 NC_004917.1 521952 522722 D hypothetical protein 521952..522722 Helicobacter hepaticus ATCC 51449 1493594 NP_860072.1 CDS rpsO NC_004917.1 522724 522996 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(522724..522996) Helicobacter hepaticus ATCC 51449 1493595 NP_860073.1 CDS HH0542 NC_004917.1 523088 523234 R hypothetical protein complement(523088..523234) Helicobacter hepaticus ATCC 51449 1493596 NP_860074.1 CDS HH0543 NC_004917.1 523405 523560 R hypothetical protein complement(523405..523560) Helicobacter hepaticus ATCC 51449 1493597 NP_860075.1 CDS HH0544 NC_004917.1 523699 523923 R hypothetical protein complement(523699..523923) Helicobacter hepaticus ATCC 51449 1493598 NP_860076.1 CDS rpoD NC_004917.1 523978 525849 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(523978..525849) Helicobacter hepaticus ATCC 51449 1493599 NP_860077.1 CDS porB NC_004917.1 525972 526919 R Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; ferrodoxin oxidoreductase beta subunit complement(525972..526919) Helicobacter hepaticus ATCC 51449 1493600 NP_860078.1 CDS porA NC_004917.1 526930 528150 R Couples the complete acetyl-CoA oxidation to aromatic ring reduction by the use of the low-potential electron shuttle ferredoxin; pyruvate flavodoxin oxidoreductase subunit alpha complement(526930..528150) Helicobacter hepaticus ATCC 51449 1493601 NP_860079.1 CDS porD NC_004917.1 528162 528572 R pyruvate flavodoxin oxidoreductase subunit delta complement(528162..528572) Helicobacter hepaticus ATCC 51449 1493602 NP_860080.1 CDS porG NC_004917.1 528592 529152 R Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; pyruvate flavodoxin oxidoreductase subunit gamma complement(528592..529152) Helicobacter hepaticus ATCC 51449 1493603 NP_860081.1 CDS HH0550 NC_004917.1 529245 529805 R hypothetical protein complement(529245..529805) Helicobacter hepaticus ATCC 51449 1493604 NP_860082.1 CDS HH0551 NC_004917.1 529802 530215 R hypothetical protein complement(529802..530215) Helicobacter hepaticus ATCC 51449 1493605 NP_860083.1 CDS HH0552 NC_004917.1 530256 530387 R hypothetical protein complement(530256..530387) Helicobacter hepaticus ATCC 51449 1493606 NP_860084.1 CDS HH0553 NC_004917.1 530406 531095 R hypothetical protein complement(530406..531095) Helicobacter hepaticus ATCC 51449 1493607 NP_860085.1 CDS HH0554 NC_004917.1 531320 531901 R predicted secreted protein; hypothetical protein complement(531320..531901) Helicobacter hepaticus ATCC 51449 1493608 NP_860086.1 CDS HH0555 NC_004917.1 532007 533854 R predicted membrane-associated; hypothetical protein complement(532007..533854) Helicobacter hepaticus ATCC 51449 1493609 NP_860087.1 CDS HH0556 NC_004917.1 533866 533958 R hypothetical protein complement(533866..533958) Helicobacter hepaticus ATCC 51449 1493610 NP_860088.1 CDS HH0557 NC_004917.1 534065 535198 D hypothetical protein 534065..535198 Helicobacter hepaticus ATCC 51449 1493611 NP_860089.1 CDS trpS NC_004917.1 535467 536465 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 535467..536465 Helicobacter hepaticus ATCC 51449 1493612 NP_860090.1 CDS HH0559 NC_004917.1 536462 537742 D predicted secreted protein; hypothetical protein 536462..537742 Helicobacter hepaticus ATCC 51449 1493613 NP_860091.1 CDS glnA NC_004917.1 537878 539317 D glutamine synthase 537878..539317 Helicobacter hepaticus ATCC 51449 1493614 NP_860092.1 CDS HH0561 NC_004917.1 539340 539819 R similar to Campylobacter jejuni CJ0829c; hypothetical protein complement(539340..539819) Helicobacter hepaticus ATCC 51449 1493615 NP_860093.1 CDS HH0562 NC_004917.1 540133 540405 D hypothetical protein 540133..540405 Helicobacter hepaticus ATCC 51449 1493616 NP_860094.1 CDS yurV NC_004917.1 540429 541409 R NifU-like protein complement(540429..541409) Helicobacter hepaticus ATCC 51449 1493617 NP_860095.1 CDS nifS NC_004917.1 541609 542775 R catalyzes the removal of sulfur from cysteine to form alanine; cysteine desulfurase complement(541609..542775) Helicobacter hepaticus ATCC 51449 1493618 NP_860096.1 CDS fliI NC_004917.1 542916 544292 R involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase complement(542916..544292) Helicobacter hepaticus ATCC 51449 1493619 NP_860097.1 CDS tig NC_004917.1 544365 545693 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 544365..545693 Helicobacter hepaticus ATCC 51449 1493620 NP_860098.1 CDS clpP NC_004917.1 545690 546280 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 545690..546280 Helicobacter hepaticus ATCC 51449 1493621 NP_860099.1 CDS HH0568 NC_004917.1 546302 547453 D hypothetical protein 546302..547453 Helicobacter hepaticus ATCC 51449 1493622 NP_860100.1 CDS def NC_004917.1 547401 547946 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 547401..547946 Helicobacter hepaticus ATCC 51449 1493623 NP_860101.1 CDS HH0570 NC_004917.1 548037 549476 D competence protein ComM 548037..549476 Helicobacter hepaticus ATCC 51449 1493624 NP_860102.1 CDS HH0571 NC_004917.1 549501 549782 D similar to Campylobacter jejuni CJ0510c; hypothetical protein 549501..549782 Helicobacter hepaticus ATCC 51449 1493625 NP_860103.1 CDS HH0572 NC_004917.1 549792 550559 R similar to Campylobacter jejuni CJ1050c; Sir2 family protein; hypothetical protein complement(549792..550559) Helicobacter hepaticus ATCC 51449 1493626 NP_860104.1 CDS HH0573 NC_004917.1 550610 552220 R predicted membrane-associated; hypothetical protein complement(550610..552220) Helicobacter hepaticus ATCC 51449 1493627 NP_860105.1 CDS HH0574 NC_004917.1 552226 552846 R hypothetical protein complement(552226..552846) Helicobacter hepaticus ATCC 51449 1493628 NP_860106.1 CDS HH0575 NC_004917.1 552958 553560 R predicted secreted protein; hypothetical protein complement(552958..553560) Helicobacter hepaticus ATCC 51449 1493629 NP_860107.1 CDS murA NC_004917.1 553581 554846 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(553581..554846) Helicobacter hepaticus ATCC 51449 1493630 NP_860108.1 CDS HH0577 NC_004917.1 554863 555270 R similar to Helicobacter pylori JHP0592; predicted secreted protein; hypothetical protein complement(554863..555270) Helicobacter hepaticus ATCC 51449 1493631 NP_860109.1 CDS galU NC_004917.1 555263 556015 R UTP- glucose-1-phosphate uridylyltransferase complement(555263..556015) Helicobacter hepaticus ATCC 51449 1493632 NP_860110.1 CDS HH0579 NC_004917.1 555999 556109 D hypothetical protein 555999..556109 Helicobacter hepaticus ATCC 51449 1493633 NP_860111.1 CDS HH0580 NC_004917.1 556106 557734 R similar to Campylobacter jejuni secreted transglycosylase CJ0843c; hypothetical protein complement(556106..557734) Helicobacter hepaticus ATCC 51449 1493634 NP_860112.1 CDS HH0581 NC_004917.1 557756 558055 R similar to Campylobacter jejuni integral membrane protein CJ0844c; hypothetical protein complement(557756..558055) Helicobacter hepaticus ATCC 51449 1493635 NP_860113.1 CDS gltX NC_004917.1 558081 559406 R charges one glutamine molecule and pairs it with tRNA(Gln); glutamylglutaminyl-tRNA synthetase complement(558081..559406) Helicobacter hepaticus ATCC 51449 1493636 NP_860114.1 CDS HH0583 NC_004917.1 559406 559975 R similar to Helicobacter pylori JHP0349; hypothetical protein complement(559406..559975) Helicobacter hepaticus ATCC 51449 1493637 NP_860115.1 CDS HH0584 NC_004917.1 560485 560958 D hypothetical protein 560485..560958 Helicobacter hepaticus ATCC 51449 1493638 NP_860116.1 CDS HH0585 NC_004917.1 560961 562517 R predicted transporter protein; hypothetical protein complement(560961..562517) Helicobacter hepaticus ATCC 51449 1493639 NP_860117.1 CDS HH0586 NC_004917.1 562622 564709 D similar to Helicobacter pylori CadA (JHP0727); cation transport ATPase 562622..564709 Helicobacter hepaticus ATCC 51449 1493640 NP_860118.1 CDS HH0587 NC_004917.1 564791 566167 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(564791..566167) Helicobacter hepaticus ATCC 51449 1493641 NP_860119.1 CDS HH0588 NC_004917.1 566289 566993 R similar to Campylobacter jejuni CJ1208; possible 5-formyltetrahydrofolate cyclo-ligase; hypothetical protein complement(566289..566993) Helicobacter hepaticus ATCC 51449 1493642 NP_860120.1 CDS HH0589 NC_004917.1 566971 567660 D similar to Campylobacter jejuni signal recognition particle protein; hypothetical protein 566971..567660 Helicobacter hepaticus ATCC 51449 1493643 NP_860121.1 CDS ftsY NC_004917.1 567657 568538 D signal recognition particle-docking GTPase FtsY 567657..568538 Helicobacter hepaticus ATCC 51449 1493644 NP_860122.1 CDS HH0591 NC_004917.1 568538 569884 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 568538..569884 Helicobacter hepaticus ATCC 51449 1493645 NP_860123.1 CDS HH0592 NC_004917.1 570138 571514 D similar to Campylobacter jejuni possible sugar transferase; hypothetical protein 570138..571514 Helicobacter hepaticus ATCC 51449 1493646 NP_860124.1 CDS atpE NC_004917.1 571785 572096 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C complement(571785..572096) Helicobacter hepaticus ATCC 51449 1493647 NP_860125.1 CDS pnp NC_004917.1 572204 574333 R polynucleotide phosphorylase complement(572204..574333) Helicobacter hepaticus ATCC 51449 1493648 NP_860126.1 CDS HH0595 NC_004917.1 574333 574998 R similar to Helicobacter pylori HP1214; hypothetical protein complement(574333..574998) Helicobacter hepaticus ATCC 51449 1493649 NP_860127.1 CDS HH0596 NC_004917.1 575012 577144 R Imp/OstA-like; organic solvent tolerance protein complement(575012..577144) Helicobacter hepaticus ATCC 51449 1493650 NP_860128.1 CDS HH0597 NC_004917.1 577222 577695 R similar to Campylobacter jejuni CJ1251; predicted membrane-associated; hypothetical protein complement(577222..577695) Helicobacter hepaticus ATCC 51449 1493651 NP_860129.1 CDS purD NC_004917.1 577692 578972 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(577692..578972) Helicobacter hepaticus ATCC 51449 1493652 NP_860130.1 CDS HH0599 NC_004917.1 579218 579973 R hypothetical protein complement(579218..579973) Helicobacter hepaticus ATCC 51449 1493653 NP_860131.1 CDS HH0600 NC_004917.1 580066 580167 D hypothetical protein 580066..580167 Helicobacter hepaticus ATCC 51449 1493654 NP_860132.1 CDS truA NC_004917.1 580219 580965 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(580219..580965) Helicobacter hepaticus ATCC 51449 1493655 NP_860133.1 CDS HH0602 NC_004917.1 580965 581984 R similar to Helicobacter pylori JHP1018; predicted membrane-associated; hypothetical protein complement(580965..581984) Helicobacter hepaticus ATCC 51449 1493656 NP_860134.1 CDS hopD NC_004917.1 581984 582631 R type IV prepilin peptidase HopD complement(581984..582631) Helicobacter hepaticus ATCC 51449 1493657 NP_860135.1 CDS pcm NC_004917.1 582647 583303 R catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase complement(582647..583303) Helicobacter hepaticus ATCC 51449 1493658 NP_860136.1 CDS HH0605 NC_004917.1 583303 584040 R similar to Aquifex aeolicus AQ_103; hypothetical protein complement(583303..584040) Helicobacter hepaticus ATCC 51449 1493659 NP_860137.1 CDS nrdF NC_004917.1 584030 585079 R B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta complement(584030..585079) Helicobacter hepaticus ATCC 51449 1493660 NP_860138.1 CDS HH0607 NC_004917.1 585188 585334 R hypothetical protein complement(585188..585334) Helicobacter hepaticus ATCC 51449 1493661 NP_860139.1 CDS dxs NC_004917.1 585378 587267 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(585378..587267) Helicobacter hepaticus ATCC 51449 1493662 NP_860140.1 CDS fliH NC_004917.1 587293 588126 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(587293..588126) Helicobacter hepaticus ATCC 51449 1493663 NP_860141.1 CDS fliG NC_004917.1 588113 589144 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(588113..589144) Helicobacter hepaticus ATCC 51449 1493664 NP_860142.1 CDS fliF NC_004917.1 589160 590872 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(589160..590872) Helicobacter hepaticus ATCC 51449 1493665 NP_860143.1 CDS hisC NC_004917.1 590882 591994 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(590882..591994) Helicobacter hepaticus ATCC 51449 1493666 NP_860144.1 CDS glmM_1 NC_004917.1 592187 593635 D phosphohexosemutase 592187..593635 Helicobacter hepaticus ATCC 51449 1493667 NP_860145.1 CDS pyrC_2 NC_004917.1 593645 594676 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 593645..594676 Helicobacter hepaticus ATCC 51449 1493668 NP_860146.1 CDS hemN_2 NC_004917.1 594693 595808 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(594693..595808) Helicobacter hepaticus ATCC 51449 1493669 NP_860147.1 CDS HH0616 NC_004917.1 595846 595956 D hypothetical protein 595846..595956 Helicobacter hepaticus ATCC 51449 1493670 NP_860148.1 CDS HH0617 NC_004917.1 595982 596416 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 595982..596416 Helicobacter hepaticus ATCC 51449 1493671 NP_860149.1 CDS lysC NC_004917.1 596478 597683 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 596478..597683 Helicobacter hepaticus ATCC 51449 1493672 NP_860150.1 CDS HH0619 NC_004917.1 597631 598245 D hypothetical protein 597631..598245 Helicobacter hepaticus ATCC 51449 1493673 NP_860151.1 CDS holB NC_004917.1 598268 598888 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 598268..598888 Helicobacter hepaticus ATCC 51449 1493674 NP_860152.1 CDS folP NC_004917.1 598966 600015 D dihydropteroate synthase 598966..600015 Helicobacter hepaticus ATCC 51449 1493675 NP_860153.1 CDS HH0622 NC_004917.1 600012 600998 D hypothetical protein 600012..600998 Helicobacter hepaticus ATCC 51449 1493676 NP_860154.1 CDS HH0623 NC_004917.1 601070 602374 D similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefF; hypothetical protein 601070..602374 Helicobacter hepaticus ATCC 51449 1493677 NP_860155.1 CDS HH0624 NC_004917.1 602371 603456 D similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefE; hypothetical protein 602371..603456 Helicobacter hepaticus ATCC 51449 1493678 NP_860156.1 CDS HH0625 NC_004917.1 603456 606521 D similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefD; hypothetical protein 603456..606521 Helicobacter hepaticus ATCC 51449 1493679 NP_860157.1 CDS HH0626 NC_004917.1 606522 607490 R similar to Campylobacter jejuni CJ0504c; hypothetical protein complement(606522..607490) Helicobacter hepaticus ATCC 51449 1493680 NP_860158.1 CDS wlaK NC_004917.1 607483 608577 R similar to degT family amidotransferases; hypothetical protein complement(607483..608577) Helicobacter hepaticus ATCC 51449 1493681 NP_860159.1 CDS aroK NC_004917.1 608630 609133 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(608630..609133) Helicobacter hepaticus ATCC 51449 1493682 NP_860160.1 CDS HH0629 NC_004917.1 609136 609753 R similar to Helicobacter pylori JHP0144; predicted secreted protein; hypothetical protein complement(609136..609753) Helicobacter hepaticus ATCC 51449 1493683 NP_860161.1 CDS HH0630 NC_004917.1 609750 610016 R similar to Campylobacter jejuni CJ1671c; predicted membrane-associated; hypothetical protein complement(609750..610016) Helicobacter hepaticus ATCC 51449 1493684 NP_860162.1 CDS eno NC_004917.1 610031 611308 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(610031..611308) Helicobacter hepaticus ATCC 51449 1493685 NP_860163.1 CDS HH0632 NC_004917.1 611335 611553 R hypothetical protein complement(611335..611553) Helicobacter hepaticus ATCC 51449 1493686 NP_860164.1 CDS recA NC_004917.1 611572 612609 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(611572..612609) Helicobacter hepaticus ATCC 51449 1493687 NP_860165.1 CDS HH0634 NC_004917.1 612710 613567 D similar to Campylobacter jejuni CJ1674; hypothetical protein 612710..613567 Helicobacter hepaticus ATCC 51449 1493688 NP_860166.1 CDS HH0635 NC_004917.1 613577 614644 R similar to Helicobacter pylori HP0567; predicted membrane-associated; hypothetical protein complement(613577..614644) Helicobacter hepaticus ATCC 51449 1493689 NP_860167.1 CDS metY NC_004917.1 614897 616189 D O-acetylhomoserine (thiol)-lyase MetY 614897..616189 Helicobacter hepaticus ATCC 51449 1493690 NP_860168.1 CDS metA NC_004917.1 616198 617079 D catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 616198..617079 Helicobacter hepaticus ATCC 51449 1493691 NP_860169.1 CDS HH0638 NC_004917.1 617111 617947 D similar to Campylobacter jejuni CJ0705; hypothetical protein 617111..617947 Helicobacter hepaticus ATCC 51449 1493692 NP_860170.1 CDS HH0639 NC_004917.1 617980 618756 D similar to Helicobacter pylori HP0958; hypothetical protein 617980..618756 Helicobacter hepaticus ATCC 51449 1493693 NP_860171.1 CDS waaA NC_004917.1 618784 620040 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 618784..620040 Helicobacter hepaticus ATCC 51449 1493694 NP_860172.1 CDS HH0641 NC_004917.1 620040 620777 D ribosomal pseudouridine synthase 620040..620777 Helicobacter hepaticus ATCC 51449 1493695 NP_860173.1 CDS HH0642 NC_004917.1 620783 621367 D hypothetical protein 620783..621367 Helicobacter hepaticus ATCC 51449 1493696 NP_860174.1 CDS HH0643 NC_004917.1 621382 622275 R predicted secreted protein; hypothetical protein complement(621382..622275) Helicobacter hepaticus ATCC 51449 1493697 NP_860175.1 CDS kfiD NC_004917.1 622353 623693 R UDP-glucose 6-dehydrogenase complement(622353..623693) Helicobacter hepaticus ATCC 51449 1493698 NP_860176.1 CDS HH0645 NC_004917.1 623729 624268 R hypothetical protein complement(623729..624268) Helicobacter hepaticus ATCC 51449 1493699 NP_860177.1 CDS fdxA NC_004917.1 624464 624742 R ferredoxin complement(624464..624742) Helicobacter hepaticus ATCC 51449 1493700 NP_860178.1 CDS HH0647 NC_004917.1 624954 625892 D nucleotide sugar dehydratase 624954..625892 Helicobacter hepaticus ATCC 51449 1493701 NP_860179.1 CDS HH0648 NC_004917.1 625889 626902 D similar to Dichelobacter nodosus lipopolysaccharide biosynthesis protein LpsA; hypothetical protein 625889..626902 Helicobacter hepaticus ATCC 51449 1493702 NP_860180.1 CDS lldP NC_004917.1 626953 628728 R L-lactate permease complement(626953..628728) Helicobacter hepaticus ATCC 51449 1493703 NP_860181.1 CDS HH0650 NC_004917.1 629022 629753 D similar to Helicobacter pylori JHP0127; predicted secreted protein; hypothetical protein 629022..629753 Helicobacter hepaticus ATCC 51449 1493704 NP_860182.1 CDS HH0651 NC_004917.1 629756 631195 D similar to Helicobacter pylori HP0138; hypothetical protein 629756..631195 Helicobacter hepaticus ATCC 51449 1493705 NP_860183.1 CDS HH0652 NC_004917.1 631188 631844 D similar to Helicobacter pylori JHP0125; hypothetical protein 631188..631844 Helicobacter hepaticus ATCC 51449 1493706 NP_860184.1 CDS modE NC_004917.1 631855 632262 D possible molybdenum transport protein ModE; hypothetical protein 631855..632262 Helicobacter hepaticus ATCC 51449 1493707 NP_860185.1 CDS modA NC_004917.1 632336 633109 D molybdenum-binding periplasmic protein ModA 632336..633109 Helicobacter hepaticus ATCC 51449 1493708 NP_860186.1 CDS HH0655 NC_004917.1 633131 633547 D hypothetical protein 633131..633547 Helicobacter hepaticus ATCC 51449 1493709 NP_860187.1 CDS modB NC_004917.1 633547 634224 D molybdenum ABC transporter permease component ModB 633547..634224 Helicobacter hepaticus ATCC 51449 1493710 NP_860188.1 CDS modC NC_004917.1 634221 635111 D molybdenum ABC transporter ATP-binding component ModC 634221..635111 Helicobacter hepaticus ATCC 51449 1493711 NP_860189.1 CDS HH0658 NC_004917.1 635116 636438 R similar to Campylobacter jejuni CJ0701; predicted protease; hypothetical protein complement(635116..636438) Helicobacter hepaticus ATCC 51449 1493712 NP_860190.1 CDS HH0659 NC_004917.1 636438 637094 R similar to Helicobacter pylori JHP0156; hypothetical protein complement(636438..637094) Helicobacter hepaticus ATCC 51449 1493713 NP_860191.1 CDS prfB NC_004917.1 637221 638321 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(637221..638321) Helicobacter hepaticus ATCC 51449 1493714 NP_860192.1 CDS HH0661 NC_004917.1 638447 640726 R similar to Helicobacter pylori HP0839; predicted outer membrane protein; hypothetical protein complement(638447..640726) Helicobacter hepaticus ATCC 51449 1493715 NP_860193.1 CDS ansB NC_004917.1 640898 642034 R L-asparaginase complement(640898..642034) Helicobacter hepaticus ATCC 51449 1493716 NP_860194.1 CDS dnaK NC_004917.1 642110 643987 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(642110..643987) Helicobacter hepaticus ATCC 51449 1493717 NP_860195.1 CDS grpE NC_004917.1 644009 644566 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(644009..644566) Helicobacter hepaticus ATCC 51449 1493718 NP_860196.1 CDS hrcA NC_004917.1 644588 645382 R Acts as a negative regulator of the grpE-dnaK-dnaJ and groELS class I heat shock operons by preventing heat-shock induction; heat-inducible transcription repressor complement(644588..645382) Helicobacter hepaticus ATCC 51449 1493719 NP_860197.1 CDS HH0666 NC_004917.1 645624 645725 D hypothetical protein 645624..645725 Helicobacter hepaticus ATCC 51449 1493720 NP_860198.1 CDS HH0667 NC_004917.1 645722 646345 D similar to Helicobacter pylori HP0112; hypothetical protein 645722..646345 Helicobacter hepaticus ATCC 51449 1493721 NP_860199.1 CDS HH0668 NC_004917.1 646362 647729 D predicted peptidase; hypothetical protein 646362..647729 Helicobacter hepaticus ATCC 51449 1493722 NP_860200.2 CDS argC NC_004917.1 647729 648763 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 647729..648763 Helicobacter hepaticus ATCC 51449 1493723 NP_860201.1 CDS HH0670 NC_004917.1 648773 649678 D similar to Helicobacter pylori JHP0987; hypothetical protein 648773..649678 Helicobacter hepaticus ATCC 51449 1493724 NP_860202.1 CDS HH0671 NC_004917.1 649679 650629 D similar to Helicobacter pylori HP0393 (CheV3); chemotaxis signal transduction protein CheV 649679..650629 Helicobacter hepaticus ATCC 51449 1493725 NP_860203.1 CDS cheA NC_004917.1 650672 653029 D chemotaxis protein histidine kinase CheA 650672..653029 Helicobacter hepaticus ATCC 51449 1493726 NP_860204.1 CDS cheW NC_004917.1 653031 653522 D chemotaxis signal transduction response regulator CheW 653031..653522 Helicobacter hepaticus ATCC 51449 1493727 NP_860205.1 CDS HH0674 NC_004917.1 653611 654438 R similar to Campylobacter jejuni CJ0282; hypothetical protein complement(653611..654438) Helicobacter hepaticus ATCC 51449 1493728 NP_860206.1 CDS HH0675 NC_004917.1 655154 656587 D probable mannose-1-phosphate guanylyltransferase ManC; hypothetical protein 655154..656587 Helicobacter hepaticus ATCC 51449 1493729 NP_860207.1 CDS HH0676 NC_004917.1 656587 657765 D similar to Helicobacter pylori HP0421; predicted glycosyl transferase; hypothetical protein 656587..657765 Helicobacter hepaticus ATCC 51449 1493730 NP_860208.1 CDS ndk NC_004917.1 657892 658305 D nucleoside diphosphate kinase 657892..658305 Helicobacter hepaticus ATCC 51449 1493731 NP_860209.1 CDS HH0678 NC_004917.1 658306 658659 D similar to Campylobacter jejuni small hydrophobic protein; hypothetical protein 658306..658659 Helicobacter hepaticus ATCC 51449 1493732 NP_860210.1 CDS rpmF NC_004917.1 658674 658823 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 658674..658823 Helicobacter hepaticus ATCC 51449 1493733 NP_860211.1 CDS plsX NC_004917.1 658845 659846 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 658845..659846 Helicobacter hepaticus ATCC 51449 1493734 NP_860212.1 CDS fabH NC_004917.1 659856 660854 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 659856..660854 Helicobacter hepaticus ATCC 51449 1493735 NP_860213.1 CDS HH0682 NC_004917.1 660935 663178 D similar to Helicobacter pylori HP0791; probable cation transport ATPase; hypothetical protein 660935..663178 Helicobacter hepaticus ATCC 51449 1493736 NP_860214.1 CDS HH0683 NC_004917.1 663198 663410 D similar to Helicobacter pylori copper ion binding protein HP1073; hypothetical protein 663198..663410 Helicobacter hepaticus ATCC 51449 1493737 NP_860215.1 CDS msbA NC_004917.1 663394 665109 D multidrug resistance protein MsbA 663394..665109 Helicobacter hepaticus ATCC 51449 1493738 NP_860216.1 CDS frdC NC_004917.1 665272 666042 D part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit 665272..666042 Helicobacter hepaticus ATCC 51449 1493739 NP_860217.1 CDS frdA NC_004917.1 666043 668019 D part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 666043..668019 Helicobacter hepaticus ATCC 51449 1493740 NP_860218.1 CDS frdB NC_004917.1 668019 668762 D part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 668019..668762 Helicobacter hepaticus ATCC 51449 1493741 NP_860219.1 CDS HH0688 NC_004917.1 668814 670376 D similar to Helicobacter pylori HP0190; predicted secreted protein; hypothetical protein 668814..670376 Helicobacter hepaticus ATCC 51449 1493742 NP_860220.1 CDS HH0689 NC_004917.1 670394 670783 R hypothetical protein complement(670394..670783) Helicobacter hepaticus ATCC 51449 1493743 NP_860221.1 CDS HH0690 NC_004917.1 670767 670973 R similar to Campylobacter jejuni CJ1047c; hypothetical protein complement(670767..670973) Helicobacter hepaticus ATCC 51449 1493744 NP_860222.1 CDS glmU NC_004917.1 670973 672337 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(670973..672337) Helicobacter hepaticus ATCC 51449 1493745 NP_860223.1 CDS fliP NC_004917.1 672436 673233 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 672436..673233 Helicobacter hepaticus ATCC 51449 1493746 NP_860224.1 CDS trmA NC_004917.1 673245 674459 D catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 673245..674459 Helicobacter hepaticus ATCC 51449 1493747 NP_860225.1 CDS HH0694 NC_004917.1 674462 675634 R similar to Campylobacter jejuni CJ1241; possible permease; hypothetical protein complement(674462..675634) Helicobacter hepaticus ATCC 51449 1493748 NP_860226.1 CDS HH0695 NC_004917.1 675663 676373 R hypothetical protein complement(675663..676373) Helicobacter hepaticus ATCC 51449 1493749 NP_860227.1 CDS HH0696 NC_004917.1 676571 677365 D similar to Helicobacter pylori JHP0604; hypothetical protein 676571..677365 Helicobacter hepaticus ATCC 51449 1493750 NP_860228.1 CDS HH0697 NC_004917.1 677368 678453 D similar to Helicobacter pylori HP0660; predicted secreted protein; hypothetical protein 677368..678453 Helicobacter hepaticus ATCC 51449 1493751 NP_860229.1 CDS rnhA NC_004917.1 678422 678868 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 678422..678868 Helicobacter hepaticus ATCC 51449 1493752 NP_860230.1 CDS rnc NC_004917.1 678861 679583 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 678861..679583 Helicobacter hepaticus ATCC 51449 1493753 NP_860231.1 CDS aroC NC_004917.1 679580 680656 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 679580..680656 Helicobacter hepaticus ATCC 51449 1493754 NP_860232.1 CDS gatA NC_004917.1 680733 682076 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 680733..682076 Helicobacter hepaticus ATCC 51449 1493755 NP_860233.1 CDS guaB NC_004917.1 682096 683541 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 682096..683541 Helicobacter hepaticus ATCC 51449 1493756 NP_860234.1 CDS HH0703 NC_004917.1 683552 683800 D hypothetical protein 683552..683800 Helicobacter hepaticus ATCC 51449 1493757 NP_860235.1 CDS fliR NC_004917.1 683806 684582 D FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 683806..684582 Helicobacter hepaticus ATCC 51449 1493758 NP_860236.1 CDS HH0705 NC_004917.1 684584 685150 R membrane-associated cation-independent thermostable nuclease; preferentially cleaves ss-DNA; involved in DNA transformation; nuclease NucT complement(684584..685150) Helicobacter hepaticus ATCC 51449 1493759 NP_860237.1 CDS HH0706 NC_004917.1 685229 687043 D similar to Campylobacter jejuni CJ1178c; hypothetical protein 685229..687043 Helicobacter hepaticus ATCC 51449 1493760 NP_860238.1 CDS gmk NC_004917.1 687043 687645 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 687043..687645 Helicobacter hepaticus ATCC 51449 1493761 NP_860239.1 CDS HH0708 NC_004917.1 687718 687966 D similar to Campylobacter jejuni CJ1176c; component of Sec-independent protein secretion pathway TatA 687718..687966 Helicobacter hepaticus ATCC 51449 1493762 NP_860240.1 CDS argS NC_004917.1 687966 689612 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 687966..689612 Helicobacter hepaticus ATCC 51449 1493763 NP_860241.1 CDS HH0710 NC_004917.1 689614 690309 D similar to Helicobacter pylori HP1331; predicted membrane-associated; hypothetical protein 689614..690309 Helicobacter hepaticus ATCC 51449 1493764 NP_860242.1 CDS HH0711 NC_004917.1 690299 690640 D similar to Helicobacter pylori HP1330; predicted membrane-associated; hypothetical protein 690299..690640 Helicobacter hepaticus ATCC 51449 1493765 NP_860243.1 CDS fldA NC_004917.1 690671 691168 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA complement(690671..691168) Helicobacter hepaticus ATCC 51449 1493766 NP_860244.1 CDS yaeC NC_004917.1 691320 692126 R similar to Helicobacter pylori HP1564; predicted outer membrane protein; hypothetical protein complement(691320..692126) Helicobacter hepaticus ATCC 51449 1493767 NP_860245.1 CDS HH0714 NC_004917.1 692177 693010 R similar to Helicobacter pylori outer membrane protein HP1564; hypothetical protein complement(692177..693010) Helicobacter hepaticus ATCC 51449 1493768 NP_860246.1 CDS HH0715 NC_004917.1 693034 693744 R similar to Helicobacter pylori HP1577; predicted ABC transporter permease component; hypothetical protein complement(693034..693744) Helicobacter hepaticus ATCC 51449 1493769 NP_860247.1 CDS metN NC_004917.1 693755 694810 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(693755..694810) Helicobacter hepaticus ATCC 51449 1493770 NP_860248.1 CDS HH0717 NC_004917.1 694903 695679 R similar to Helicobacter pylori HP1459; possible pseudouridine synthase; hypothetical protein complement(694903..695679) Helicobacter hepaticus ATCC 51449 1493771 NP_860249.1 CDS HH0718 NC_004917.1 695680 696813 R similar to Helicobacter pylori JHP0571; predicted secreted protein; hypothetical protein complement(695680..696813) Helicobacter hepaticus ATCC 51449 1493772 NP_860250.1 CDS dapD NC_004917.1 696880 698088 R 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(696880..698088) Helicobacter hepaticus ATCC 51449 1493773 NP_860251.1 CDS HH0720 NC_004917.1 698313 698786 R predicted secreted protein; hypothetical protein complement(698313..698786) Helicobacter hepaticus ATCC 51449 1493774 NP_860252.1 CDS cfrA NC_004917.1 699209 701395 D similar to Campylobacter jejuni/coli siderophore receptor protein CfrA; hypothetical protein 699209..701395 Helicobacter hepaticus ATCC 51449 1493775 NP_860253.1 CDS aspA NC_004917.1 701495 702934 D catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 701495..702934 Helicobacter hepaticus ATCC 51449 1493776 NP_860254.1 CDS dcuB NC_004917.1 703014 704441 D functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 703014..704441 Helicobacter hepaticus ATCC 51449 1493777 NP_860255.1 CDS HH0724 NC_004917.1 704468 704572 D predicted membrane-associated; hypothetical protein 704468..704572 Helicobacter hepaticus ATCC 51449 1493778 NP_860256.1 CDS HH0725 NC_004917.1 704613 706670 D similar to methyl-accepting chemotaxis protein; similar to Campylobacter jejuni CJ1506c; hypothetical protein 704613..706670 Helicobacter hepaticus ATCC 51449 1493779 NP_860257.1 CDS accA NC_004917.1 706756 707682 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(706756..707682) Helicobacter hepaticus ATCC 51449 1493780 NP_860258.1 CDS fabF NC_004917.1 707695 708930 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(707695..708930) Helicobacter hepaticus ATCC 51449 1493781 NP_860259.1 CDS HH0728 NC_004917.1 709006 709236 R acyl carrier protein complement(709006..709236) Helicobacter hepaticus ATCC 51449 1493782 NP_860260.1 CDS HH0729 NC_004917.1 709267 709455 D hypothetical protein 709267..709455 Helicobacter hepaticus ATCC 51449 1493783 NP_860261.1 CDS HH0730 NC_004917.1 709452 710132 R hypothetical protein complement(709452..710132) Helicobacter hepaticus ATCC 51449 1493784 NP_860262.1 CDS HH0731 NC_004917.1 710145 710300 R hypothetical protein complement(710145..710300) Helicobacter hepaticus ATCC 51449 1493785 NP_860263.1 CDS fabG NC_004917.1 710397 711140 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(710397..711140) Helicobacter hepaticus ATCC 51449 1493786 NP_860264.1 CDS HH0733 NC_004917.1 711191 713506 R similar to Helicobacter pylori HP0597; predicted penicillin binding protein; hypothetical protein complement(711191..713506) Helicobacter hepaticus ATCC 51449 1493787 NP_860265.1 CDS HH0734 NC_004917.1 713503 718950 R predicted membrane-associated; hypothetical protein complement(713503..718950) Helicobacter hepaticus ATCC 51449 1492423 NP_860266.1 CDS sfhB NC_004917.1 719034 719945 R similar to Helicobacter pylori HP0347; predicted pseudouridylate synthase; hypothetical protein complement(719034..719945) Helicobacter hepaticus ATCC 51449 1492424 NP_860267.1 CDS HH0736 NC_004917.1 720685 722130 R predicted membrane-associated; hypothetical protein complement(720685..722130) Helicobacter hepaticus ATCC 51449 1492425 NP_860268.1 CDS HH0737 NC_004917.1 722273 722392 D hypothetical protein 722273..722392 Helicobacter hepaticus ATCC 51449 1492426 NP_860269.1 CDS HH0738 NC_004917.1 722420 723247 D amino-acid ABC transporter periplasmic solute-binding protein 722420..723247 Helicobacter hepaticus ATCC 51449 1492427 NP_860270.1 CDS msrA NC_004917.1 723285 723782 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(723285..723782) Helicobacter hepaticus ATCC 51449 1492428 NP_860271.1 CDS selA NC_004917.1 723867 725237 D catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 723867..725237 Helicobacter hepaticus ATCC 51449 1492429 NP_860272.1 CDS selB NC_004917.1 725248 727146 D selenocysteine-specific elongation factor SelB 725248..727146 Helicobacter hepaticus ATCC 51449 1492430 NP_860273.1 CDS HH0742 NC_004917.1 727163 728266 D hypothetical protein 727163..728266 Helicobacter hepaticus ATCC 51449 1492431 NP_860274.1 CDS moeA_2 NC_004917.1 728277 729515 D molybdopterin biosynthesis enzyme 728277..729515 Helicobacter hepaticus ATCC 51449 1492432 NP_860275.1 CDS HH0744 NC_004917.1 729543 729959 D similar to Helicobacter pylori HP0031; hypothetical protein 729543..729959 Helicobacter hepaticus ATCC 51449 1492433 NP_860276.1 CDS HH0745 NC_004917.1 729969 731624 D predicted secreted protein; hypothetical protein 729969..731624 Helicobacter hepaticus ATCC 51449 1492434 NP_860277.1 CDS HH0746 NC_004917.1 731701 732141 D predicted secreted protein; hypothetical protein 731701..732141 Helicobacter hepaticus ATCC 51449 1492435 NP_860278.1 CDS HH0747 NC_004917.1 732226 732339 R hypothetical protein complement(732226..732339) Helicobacter hepaticus ATCC 51449 1492436 NP_860279.1 CDS HH0748 NC_004917.1 732416 733102 R hypothetical protein complement(732416..733102) Helicobacter hepaticus ATCC 51449 1492437 NP_860280.1 CDS HH0749 NC_004917.1 733425 733613 D hypothetical protein 733425..733613 Helicobacter hepaticus ATCC 51449 1492438 NP_860281.1 CDS HH0750 NC_004917.1 733628 735880 D hypothetical protein 733628..735880 Helicobacter hepaticus ATCC 51449 1492439 NP_860282.1 CDS HH0751 NC_004917.1 735939 736070 D hypothetical protein 735939..736070 Helicobacter hepaticus ATCC 51449 1492440 NP_860283.1 CDS HH0752 NC_004917.1 736252 737124 D similar to Campylobacter coli; predicted phage transposition protein MuB; hypothetical protein 736252..737124 Helicobacter hepaticus ATCC 51449 1492441 NP_860284.1 CDS HH0753 NC_004917.1 737135 737317 D hypothetical protein 737135..737317 Helicobacter hepaticus ATCC 51449 1492442 NP_860285.1 CDS HH0754 NC_004917.1 737308 737787 D similar to Campylobacter coli; predicted host-nuclease inhibitor protein Gam; hypothetical protein 737308..737787 Helicobacter hepaticus ATCC 51449 1492443 NP_860286.1 CDS HH0755 NC_004917.1 737818 738204 D hypothetical protein 737818..738204 Helicobacter hepaticus ATCC 51449 1492444 NP_860287.1 CDS HH0756 NC_004917.1 738204 738455 D hypothetical protein 738204..738455 Helicobacter hepaticus ATCC 51449 1492445 NP_860288.1 CDS HH0757 NC_004917.1 738627 738857 D hypothetical protein 738627..738857 Helicobacter hepaticus ATCC 51449 1492446 NP_860289.1 CDS HH0758 NC_004917.1 738850 739353 D hypothetical protein 738850..739353 Helicobacter hepaticus ATCC 51449 1492447 NP_860290.1 CDS HH0759 NC_004917.1 739466 740005 R hypothetical protein complement(739466..740005) Helicobacter hepaticus ATCC 51449 1492448 NP_860291.1 CDS HH0760 NC_004917.1 740016 741512 R hypothetical protein complement(740016..741512) Helicobacter hepaticus ATCC 51449 1492449 NP_860292.1 CDS HH0761 NC_004917.1 741727 742557 R hypothetical protein complement(741727..742557) Helicobacter hepaticus ATCC 51449 1492450 NP_860293.1 CDS HH0762 NC_004917.1 742721 743074 D predicted secreted protein; hypothetical protein 742721..743074 Helicobacter hepaticus ATCC 51449 1492451 NP_860294.1 CDS HH0763 NC_004917.1 743058 743267 D predicted secreted protein; hypothetical protein 743058..743267 Helicobacter hepaticus ATCC 51449 1492452 NP_860295.1 CDS HH0764 NC_004917.1 743264 743452 D predicted membrane-associated; hypothetical protein 743264..743452 Helicobacter hepaticus ATCC 51449 1492453 NP_860296.1 CDS HH0765 NC_004917.1 743449 743763 D predicted membrane-associated; hypothetical protein 743449..743763 Helicobacter hepaticus ATCC 51449 1492454 NP_860297.1 CDS HH0766 NC_004917.1 743760 743864 D predicted secreted protein; hypothetical protein 743760..743864 Helicobacter hepaticus ATCC 51449 1492455 NP_860298.1 CDS HH0767 NC_004917.1 743877 744443 D hypothetical protein 743877..744443 Helicobacter hepaticus ATCC 51449 1492456 NP_860299.1 CDS HH0768 NC_004917.1 744506 745078 D hypothetical protein 744506..745078 Helicobacter hepaticus ATCC 51449 1492457 NP_860300.1 CDS HH0769 NC_004917.1 745179 745484 D hypothetical protein 745179..745484 Helicobacter hepaticus ATCC 51449 1492458 NP_860301.1 CDS HH0770 NC_004917.1 745547 745738 D hypothetical protein 745547..745738 Helicobacter hepaticus ATCC 51449 1492459 NP_860302.1 CDS HH0771 NC_004917.1 745735 747402 D predicted membrane-associated; hypothetical protein 745735..747402 Helicobacter hepaticus ATCC 51449 1492460 NP_860303.1 CDS HH0772 NC_004917.1 747418 748290 D hypothetical protein 747418..748290 Helicobacter hepaticus ATCC 51449 1492461 NP_860304.1 CDS HH0773 NC_004917.1 748506 750071 D similar to Campylobacter jejuni CJ1135; predicted glycosyl transferase; hypothetical protein 748506..750071 Helicobacter hepaticus ATCC 51449 1492462 NP_860305.1 CDS HH0774 NC_004917.1 750112 751998 R similar to Helicobacter pylori JHP1312; predicted membrane-associated; hypothetical protein complement(750112..751998) Helicobacter hepaticus ATCC 51449 1492463 NP_860306.1 CDS HH0775 NC_004917.1 751995 752681 R predicted membrane-associated; hypothetical protein complement(751995..752681) Helicobacter hepaticus ATCC 51449 1492464 NP_860307.1 CDS yhcG NC_004917.1 752678 753421 R ATP binding component; ABC transporter complement(752678..753421) Helicobacter hepaticus ATCC 51449 1492465 NP_860308.1 CDS rpsU NC_004917.1 753513 753725 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(753513..753725) Helicobacter hepaticus ATCC 51449 1492466 NP_860309.1 CDS ftsZ NC_004917.1 753962 755176 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(753962..755176) Helicobacter hepaticus ATCC 51449 1492467 NP_860310.1 CDS ftsA NC_004917.1 755189 756559 R cell division protein FtsA complement(755189..756559) Helicobacter hepaticus ATCC 51449 1492468 NP_860311.1 CDS HH0780 NC_004917.1 756567 758066 R similar to Helicobacter pylori JHP0911; predicted secreted protein; hypothetical protein complement(756567..758066) Helicobacter hepaticus ATCC 51449 1492469 NP_860312.1 CDS HH0781 NC_004917.1 758093 758221 R predicted membrane-associated; hypothetical protein complement(758093..758221) Helicobacter hepaticus ATCC 51449 1492470 NP_860313.1 CDS ftsW_1 NC_004917.1 758294 759436 R cell division membrane protein FtsW/MrdB/SpoVE complement(758294..759436) Helicobacter hepaticus ATCC 51449 1492471 NP_860314.1 CDS HH0783 NC_004917.1 759497 760552 D ribosomal pseudouridine synthase 759497..760552 Helicobacter hepaticus ATCC 51449 1492472 NP_860315.1 CDS HH0784 NC_004917.1 760482 761747 D similar to Helicobacter pylori JHP0683; predicted secreted protein; hypothetical protein 760482..761747 Helicobacter hepaticus ATCC 51449 1492473 NP_860316.1 CDS trmB NC_004917.1 761747 762937 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 761747..762937 Helicobacter hepaticus ATCC 51449 1492474 NP_860317.1 CDS ftsE NC_004917.1 762941 763609 D ATP-binding component; possibly involved in cell division; ABC transporter 762941..763609 Helicobacter hepaticus ATCC 51449 1492475 NP_860318.1 CDS ftsX NC_004917.1 763596 764405 D cell division protein FtsX 763596..764405 Helicobacter hepaticus ATCC 51449 1492476 NP_860319.1 CDS HH0788 NC_004917.1 764353 765624 D similar to Helicobacter pylori HP0750; hypothetical protein 764353..765624 Helicobacter hepaticus ATCC 51449 1492477 NP_860320.1 CDS flaG NC_004917.1 765679 766071 D possibly involved in flagella export; flagellar protein FlaG 765679..766071 Helicobacter hepaticus ATCC 51449 1492478 NP_860321.1 CDS fliD NC_004917.1 766121 768169 D involved in flagellin assembly; flagellar capping protein 766121..768169 Helicobacter hepaticus ATCC 51449 1492479 NP_860322.1 CDS fliS NC_004917.1 768180 768563 D flagellin specific chaperone; flagellar protein FliS 768180..768563 Helicobacter hepaticus ATCC 51449 1492480 NP_860323.1 CDS HH0792 NC_004917.1 768547 768780 D similar to Helicobacter pylori HP0754; hypothetical protein 768547..768780 Helicobacter hepaticus ATCC 51449 1492481 NP_860324.1 CDS HH0793 NC_004917.1 768908 769195 D similar to Campylobacter jejuni CJ0913c; histone-like DNA-binding protein HU (HupB) 768908..769195 Helicobacter hepaticus ATCC 51449 1492482 NP_860325.1 CDS gpsA NC_004917.1 769221 770156 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(769221..770156) Helicobacter hepaticus ATCC 51449 1492483 NP_860326.1 CDS HH0795 NC_004917.1 770200 770880 R predicted secreted protein; hypothetical protein complement(770200..770880) Helicobacter hepaticus ATCC 51449 1492484 NP_860327.1 CDS gatB NC_004917.1 771081 772505 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 771081..772505 Helicobacter hepaticus ATCC 51449 1492485 NP_860328.1 CDS HH0797 NC_004917.1 772873 775932 D possible SNF2 family helicase; hypothetical protein 772873..775932 Helicobacter hepaticus ATCC 51449 1492486 NP_860329.1 CDS HH0798 NC_004917.1 775929 779099 D similar to Helicobacter pylori JHP1409; predicted type II DNA modification enzyme (methyltransferase); hypothetical protein 775929..779099 Helicobacter hepaticus ATCC 51449 1492487 NP_860330.1 CDS HH0799 NC_004917.1 779190 780509 D hypothetical protein 779190..780509 Helicobacter hepaticus ATCC 51449 1492488 NP_860331.1 CDS HH0800 NC_004917.1 780641 781690 D similar to Helicobacter pylori JHP0346; hypothetical protein 780641..781690 Helicobacter hepaticus ATCC 51449 1492489 NP_860332.1 CDS HH0801 NC_004917.1 782105 782248 D hypothetical protein 782105..782248 Helicobacter hepaticus ATCC 51449 1492490 NP_860333.1 CDS HH0802 NC_004917.1 782301 782450 D hypothetical protein 782301..782450 Helicobacter hepaticus ATCC 51449 1492491 NP_860334.1 CDS HH0803 NC_004917.1 782535 782630 R hypothetical protein complement(782535..782630) Helicobacter hepaticus ATCC 51449 1492492 NP_860335.1 CDS HH0804 NC_004917.1 782664 783227 R predicted secreted protein; hypothetical protein complement(782664..783227) Helicobacter hepaticus ATCC 51449 1492493 NP_860336.1 CDS HH0805 NC_004917.1 783232 784812 R similar to Campylobacter jejuni CJ0256; predicted membrane-associated; hypothetical protein complement(783232..784812) Helicobacter hepaticus ATCC 51449 1492494 NP_860337.1 CDS proA NC_004917.1 784814 786052 R gamma-glutamyl phosphate reductase complement(784814..786052) Helicobacter hepaticus ATCC 51449 1492495 NP_860338.1 CDS ispG NC_004917.1 786052 787116 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(786052..787116) Helicobacter hepaticus ATCC 51449 1492496 NP_860339.1 CDS hypA NC_004917.1 787130 787555 D plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein 787130..787555 Helicobacter hepaticus ATCC 51449 1492497 NP_860340.1 CDS HH0809 NC_004917.1 787568 788023 D hypothetical protein 787568..788023 Helicobacter hepaticus ATCC 51449 1492498 NP_860341.1 CDS lpxB NC_004917.1 788039 789205 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; ipid-A-disaccharide synthase 788039..789205 Helicobacter hepaticus ATCC 51449 1492499 NP_860342.1 CDS HH0811 NC_004917.1 789458 790855 D similar to Helicobacter pylori HP0497; sodium-dependent transporter; hypothetical protein 789458..790855 Helicobacter hepaticus ATCC 51449 1492500 NP_860343.1 CDS HH0812 NC_004917.1 790961 791629 R similar to Helicobacter pylori Hop-family proteins; hypothetical protein complement(790961..791629) Helicobacter hepaticus ATCC 51449 1492501 NP_860344.1 CDS HH0813 NC_004917.1 791998 792906 R hypothetical protein complement(791998..792906) Helicobacter hepaticus ATCC 51449 1492502 NP_860345.1 CDS HH0814 NC_004917.1 792918 793781 R hypothetical protein complement(792918..793781) Helicobacter hepaticus ATCC 51449 1492503 NP_860346.1 CDS HH0815 NC_004917.1 793718 794452 R predicted membrane-associated; hypothetical protein complement(793718..794452) Helicobacter hepaticus ATCC 51449 1492504 NP_860347.1 CDS HH0816 NC_004917.1 794553 795320 R similar to Helicobacter pylori JHP1437; predicted secreted protein; hypothetical protein complement(794553..795320) Helicobacter hepaticus ATCC 51449 1492505 NP_860348.1 CDS HH0817 NC_004917.1 795321 796307 R similar to Helicobacter pylori HP0727; predicted transcriptional regulator; hypothetical protein complement(795321..796307) Helicobacter hepaticus ATCC 51449 1492506 NP_860349.1 CDS nspC NC_004917.1 796308 797543 R carboxynorspermidine decarboxylase NspC complement(796308..797543) Helicobacter hepaticus ATCC 51449 1492507 NP_860350.1 CDS HH0819 NC_004917.1 797530 798495 R similar to Helicobacter pylori HP0019 (CheV1); chemotaxis signal transduction protein CheV complement(797530..798495) Helicobacter hepaticus ATCC 51449 1492508 NP_860351.1 CDS pssA NC_004917.1 798553 799275 R phosphatidylserine synthase PssA complement(798553..799275) Helicobacter hepaticus ATCC 51449 1492509 NP_860352.1 CDS HH0821 NC_004917.1 799265 799897 R similar to Helicobacter pylori JHP0354; predicted membrane-associated; hypothetical protein complement(799265..799897) Helicobacter hepaticus ATCC 51449 1492510 NP_860353.1 CDS ftsH_2 NC_004917.1 799907 801742 R cell division protein FtsH; membrane bound zinc metallopeptidase complement(799907..801742) Helicobacter hepaticus ATCC 51449 1492511 NP_860354.1 CDS HH0823 NC_004917.1 801739 801858 R hypothetical protein complement(801739..801858) Helicobacter hepaticus ATCC 51449 1492512 NP_860355.1 CDS prmA NC_004917.1 801831 802784 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(801831..802784) Helicobacter hepaticus ATCC 51449 1492513 NP_860356.1 CDS cheY NC_004917.1 802806 803183 R chemotaxis regulatory protein CheY complement(802806..803183) Helicobacter hepaticus ATCC 51449 1492514 NP_860357.1 CDS hisA NC_004917.1 803271 804002 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(803271..804002) Helicobacter hepaticus ATCC 51449 1492515 NP_860358.1 CDS HH0827 NC_004917.1 804005 804859 R predicted membrane-associated; hypothetical protein complement(804005..804859) Helicobacter hepaticus ATCC 51449 1492516 NP_860359.1 CDS amiA NC_004917.1 804875 806041 R N-acetylmuramoyl-L-alanine amidase complement(804875..806041) Helicobacter hepaticus ATCC 51449 1492517 NP_860360.1 CDS HH0829 NC_004917.1 806050 807135 R similar to Helicobacter pylori HP0773; hypothetical protein complement(806050..807135) Helicobacter hepaticus ATCC 51449 1492518 NP_860361.1 CDS tyrS NC_004917.1 807146 808348 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(807146..808348) Helicobacter hepaticus ATCC 51449 1492519 NP_860362.1 CDS spoT NC_004917.1 808361 810511 R similar to guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; hypothetical protein complement(808361..810511) Helicobacter hepaticus ATCC 51449 1492520 NP_860363.1 CDS rpoZ NC_004917.1 810521 810745 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(810521..810745) Helicobacter hepaticus ATCC 51449 1492521 NP_860364.1 CDS pyrH NC_004917.1 810823 811533 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(810823..811533) Helicobacter hepaticus ATCC 51449 1492522 NP_860365.1 CDS HH0834 NC_004917.1 811673 812179 R predicted secreted protein; hypothetical protein complement(811673..812179) Helicobacter hepaticus ATCC 51449 1492523 NP_860366.1 CDS HH0835 NC_004917.1 812262 812651 R predicted secreted protein; hypothetical protein complement(812262..812651) Helicobacter hepaticus ATCC 51449 1492524 NP_860367.1 CDS HH0836 NC_004917.1 812680 814107 R similar to Campylobacter jejuni CJ1249; hypothetical protein complement(812680..814107) Helicobacter hepaticus ATCC 51449 1492525 NP_860368.1 CDS HH0837 NC_004917.1 814150 814902 R similar to Helicobacter pylori HP1504; hypothetical protein complement(814150..814902) Helicobacter hepaticus ATCC 51449 1492526 NP_860369.1 CDS ribD NC_004917.1 814890 815936 R riboflavin biosynthesis protein RibD complement(814890..815936) Helicobacter hepaticus ATCC 51449 1492527 NP_860370.1 CDS HH0839 NC_004917.1 815920 816393 R similar to Helicobacter pylori JHP0379; hypothetical protein complement(815920..816393) Helicobacter hepaticus ATCC 51449 1492528 NP_860371.1 CDS rbfA NC_004917.1 816404 816754 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(816404..816754) Helicobacter hepaticus ATCC 51449 1492529 NP_860372.1 CDS tgt NC_004917.1 816744 817889 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(816744..817889) Helicobacter hepaticus ATCC 51449 1492530 NP_860373.1 CDS proC NC_004917.1 817903 818757 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(817903..818757) Helicobacter hepaticus ATCC 51449 1492531 NP_860374.2 CDS HH0843 NC_004917.1 818757 819197 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(818757..819197) Helicobacter hepaticus ATCC 51449 1492532 NP_860375.1 CDS comL NC_004917.1 819333 819974 D similar to Helicobacter pylori HP1378; predicted ComL-like lipoprotein; hypothetical protein 819333..819974 Helicobacter hepaticus ATCC 51449 1492533 NP_860376.1 CDS lon NC_004917.1 819983 822391 D ATP-dependent protease LA 819983..822391 Helicobacter hepaticus ATCC 51449 1492534 NP_860377.1 CDS HH0846 NC_004917.1 822435 823631 R hypothetical protein complement(822435..823631) Helicobacter hepaticus ATCC 51449 1492535 NP_860378.1 CDS HH0847 NC_004917.1 823779 825152 R hypothetical protein complement(823779..825152) Helicobacter hepaticus ATCC 51449 1492536 NP_860379.1 CDS HH0848 NC_004917.1 825286 825402 R predicted secreted protein; hypothetical protein complement(825286..825402) Helicobacter hepaticus ATCC 51449 1492537 NP_860380.1 CDS cysK_2 NC_004917.1 825490 826392 D cysteine synthase 825490..826392 Helicobacter hepaticus ATCC 51449 1492538 NP_860381.1 CDS HH0850 NC_004917.1 826490 828208 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(826490..828208) Helicobacter hepaticus ATCC 51449 1492539 NP_860382.1 CDS metF NC_004917.1 828289 829194 R possible 5,10-methylenetetrahydrofolate reductase; hypothetical protein complement(828289..829194) Helicobacter hepaticus ATCC 51449 1492540 NP_860383.1 CDS metE NC_004917.1 829230 831506 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(829230..831506) Helicobacter hepaticus ATCC 51449 1492541 NP_860384.1 CDS pldA NC_004917.1 831724 832581 R phospholipase A complement(831724..832581) Helicobacter hepaticus ATCC 51449 1492542 NP_860385.1 CDS glmS NC_004917.1 832635 834488 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 832635..834488 Helicobacter hepaticus ATCC 51449 1492543 NP_860386.1 CDS HH0855 NC_004917.1 834475 834894 R predicted membrane-associated; hypothetical protein complement(834475..834894) Helicobacter hepaticus ATCC 51449 1492544 NP_860387.1 CDS HH0856 NC_004917.1 834934 835836 R similar to phage lambda cII repressor protease; membrane protease subunits complement(834934..835836) Helicobacter hepaticus ATCC 51449 1492545 NP_860388.1 CDS HH0857 NC_004917.1 836061 837422 D hypothetical protein 836061..837422 Helicobacter hepaticus ATCC 51449 1492546 NP_860389.1 CDS HH0858 NC_004917.1 837433 837561 D hypothetical protein 837433..837561 Helicobacter hepaticus ATCC 51449 1492547 NP_860390.1 CDS alaS NC_004917.1 837573 840251 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(837573..840251) Helicobacter hepaticus ATCC 51449 1492548 NP_860391.1 CDS HH0860 NC_004917.1 840303 840731 R similar to Helicobacter pylori HP1580; predicted membrane-associated; hypothetical protein complement(840303..840731) Helicobacter hepaticus ATCC 51449 1492549 NP_860392.1 CDS pdxA NC_004917.1 840968 841894 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(840968..841894) Helicobacter hepaticus ATCC 51449 1492550 NP_860393.1 CDS pdxJ NC_004917.1 841882 842685 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(841882..842685) Helicobacter hepaticus ATCC 51449 1492551 NP_860394.1 CDS ilvH NC_004917.1 842696 843178 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(842696..843178) Helicobacter hepaticus ATCC 51449 1492552 NP_860395.1 CDS ilvI NC_004917.1 843180 844892 R catalyzes the formation of 2-acetolactate from pyruvate, leucine resistant; also known as acetolactate synthase 3 large subunit; acetolactate synthase 3 catalytic subunit complement(843180..844892) Helicobacter hepaticus ATCC 51449 1492553 NP_860396.1 CDS HH0865 NC_004917.1 845046 846215 D similar to Campylobacter jejuni predicted transport transmembrane protein CJ1040c; hypothetical protein 845046..846215 Helicobacter hepaticus ATCC 51449 1492554 NP_860397.1 CDS HH0866 NC_004917.1 846277 846672 D similar to Campylobacter jejuni CJ202c; predicted secreted protein; hypothetical protein 846277..846672 Helicobacter hepaticus ATCC 51449 1492555 NP_860398.1 CDS HH0867 NC_004917.1 846644 846814 D predicted membrane-associated; hypothetical protein 846644..846814 Helicobacter hepaticus ATCC 51449 1492556 NP_860399.1 CDS HH0868 NC_004917.1 846898 847104 D similar to Campylobacter jejuni integral membrane protein CJ0201c; hypothetical protein 846898..847104 Helicobacter hepaticus ATCC 51449 1492557 NP_860400.1 CDS glcD NC_004917.1 847274 848674 R subunit D; glycolate oxidase complement(847274..848674) Helicobacter hepaticus ATCC 51449 1492558 NP_860401.1 CDS HH0870 NC_004917.1 848677 849423 R similar to Campylobacter jejuni CJ1214c; predicted secreted protein; hypothetical protein complement(848677..849423) Helicobacter hepaticus ATCC 51449 1492559 NP_860402.1 CDS HH0871 NC_004917.1 849434 850096 R similar to Helicobacter pylori HP0507; hypothetical protein complement(849434..850096) Helicobacter hepaticus ATCC 51449 1492560 NP_860403.1 CDS HH0872 NC_004917.1 850086 851285 R similar to Helicobacter pylori HP0506; predicted secreted protein; hypothetical protein complement(850086..851285) Helicobacter hepaticus ATCC 51449 1492561 NP_860404.1 CDS HH0873 NC_004917.1 851450 851638 D predicted membrane-associated; hypothetical protein 851450..851638 Helicobacter hepaticus ATCC 51449 1492562 NP_860405.1 CDS flgM NC_004917.1 851729 851941 D flagellar anti FliA (sigma 28) factor FlgM 851729..851941 Helicobacter hepaticus ATCC 51449 1492563 NP_860406.1 CDS HH0875 NC_004917.1 852006 852431 D similar to Helicobacter pylori JHP1048; hypothetical protein 852006..852431 Helicobacter hepaticus ATCC 51449 1492564 NP_860407.1 CDS flgK NC_004917.1 852440 854260 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 852440..854260 Helicobacter hepaticus ATCC 51449 1492565 NP_860408.1 CDS HH0877 NC_004917.1 854244 854972 D similar to Helicobacter pylori HP0174; predicted membrane-associated; hypothetical protein 854244..854972 Helicobacter hepaticus ATCC 51449 1492566 NP_860409.1 CDS HH0878 NC_004917.1 855054 855431 R hypothetical protein complement(855054..855431) Helicobacter hepaticus ATCC 51449 1492567 NP_860410.1 CDS ftsH_1 NC_004917.1 855412 857100 R cell division protein FtsH; ATP-dependent zinc metalloproteinase complement(855412..857100) Helicobacter hepaticus ATCC 51449 1492568 NP_860411.1 CDS HH0880 NC_004917.1 857087 858358 R similar to Helicobacter pylori HP0285; hypothetical protein complement(857087..858358) Helicobacter hepaticus ATCC 51449 1492569 NP_860412.1 CDS HH0881 NC_004917.1 858370 859992 R similar to Helicobacter pylori HP0284; predicted membrane-associated; hypothetical protein complement(858370..859992) Helicobacter hepaticus ATCC 51449 1492570 NP_860413.1 CDS aroB NC_004917.1 859989 861050 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(859989..861050) Helicobacter hepaticus ATCC 51449 1492571 NP_860414.1 CDS HH0883 NC_004917.1 861059 862492 R similar to Helicobacter pylori HP0282; hypothetical protein complement(861059..862492) Helicobacter hepaticus ATCC 51449 1492572 NP_860415.1 CDS HH0884 NC_004917.1 862557 863240 R similar to Helicobacter pylori HP0778; hypothetical protein complement(862557..863240) Helicobacter hepaticus ATCC 51449 1492573 NP_860416.1 CDS HH0885 NC_004917.1 863249 863506 R similar to Helicobacter pylori HP0495; hypothetical protein complement(863249..863506) Helicobacter hepaticus ATCC 51449 1492574 NP_860417.1 CDS HH0886 NC_004917.1 863510 863926 R similar to Helicobacter pylori HP0496; hypothetical protein complement(863510..863926) Helicobacter hepaticus ATCC 51449 1492575 NP_860418.1 CDS HH0887 NC_004917.1 864254 865507 D similar to Helicobacter pylori sodium- and chloride-dependent transporter; hypothetical protein 864254..865507 Helicobacter hepaticus ATCC 51449 1492576 NP_860419.1 CDS carA NC_004917.1 865512 866648 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(865512..866648) Helicobacter hepaticus ATCC 51449 1492577 NP_860420.1 CDS HH0889 NC_004917.1 866645 867196 R similar to Helicobacter pylori JHP1157; hypothetical protein complement(866645..867196) Helicobacter hepaticus ATCC 51449 1492578 NP_860421.1 CDS pbpA NC_004917.1 867266 869275 R penicillin-binding protein complement(867266..869275) Helicobacter hepaticus ATCC 51449 1492579 NP_860422.1 CDS HH0891 NC_004917.1 869283 870689 R similar to Helicobacter pylori JHP0546; predicted methyl-accepting chemotaxis protein (MCP); hypothetical protein complement(869283..870689) Helicobacter hepaticus ATCC 51449 1492580 NP_860423.1 CDS HH0892 NC_004917.1 870761 870859 R hypothetical protein complement(870761..870859) Helicobacter hepaticus ATCC 51449 1492581 NP_860424.1 CDS fur NC_004917.1 870931 871392 D ferric uptake regulation protein 870931..871392 Helicobacter hepaticus ATCC 51449 1492582 NP_860425.1 CDS HH0894 NC_004917.1 871570 872250 R hypothetical protein complement(871570..872250) Helicobacter hepaticus ATCC 51449 1492583 NP_860426.1 CDS HH0895 NC_004917.1 872253 873557 R similar to Helicobacter pylori conserved hypothetical integral membrane protein; hypothetical protein complement(872253..873557) Helicobacter hepaticus ATCC 51449 1492584 NP_860427.1 CDS cysK NC_004917.1 873567 874793 R catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase complement(873567..874793) Helicobacter hepaticus ATCC 51449 1492585 NP_860428.1 CDS HH0897 NC_004917.1 874793 875782 R similar to Helicobacter pylori HP1234; predicted membrane-associated; hypothetical protein complement(874793..875782) Helicobacter hepaticus ATCC 51449 1492586 NP_860429.1 CDS HH0898 NC_004917.1 875779 875874 R hypothetical protein complement(875779..875874) Helicobacter hepaticus ATCC 51449 1492587 NP_860430.1 CDS flgH NC_004917.1 875956 876690 D part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 875956..876690 Helicobacter hepaticus ATCC 51449 1492588 NP_860431.1 CDS neuA NC_004917.1 876702 877409 D acylneuraminate cytidylyltransferase 876702..877409 Helicobacter hepaticus ATCC 51449 1492589 NP_860432.1 CDS HH0901 NC_004917.1 877412 877660 R similar to Campylobacter jejuni CJ0761; hypothetical protein complement(877412..877660) Helicobacter hepaticus ATCC 51449 1492590 NP_860433.1 CDS HH0902 NC_004917.1 877648 877845 R hypothetical protein complement(877648..877845) Helicobacter hepaticus ATCC 51449 1492591 NP_860434.1 CDS HH0903 NC_004917.1 877863 879089 R predicted secreted protein; hypothetical protein complement(877863..879089) Helicobacter hepaticus ATCC 51449 1492592 NP_860435.1 CDS HH0904 NC_004917.1 879109 879285 R hypothetical protein complement(879109..879285) Helicobacter hepaticus ATCC 51449 1492593 NP_860436.1 CDS HH0905 NC_004917.1 879333 879662 R hypothetical protein complement(879333..879662) Helicobacter hepaticus ATCC 51449 1492594 NP_860437.1 CDS HH0906 NC_004917.1 879791 880048 D hypothetical protein 879791..880048 Helicobacter hepaticus ATCC 51449 1492595 NP_860438.1 CDS HH0907 NC_004917.1 880147 881694 D flagellar modification protein; hypothetical protein 880147..881694 Helicobacter hepaticus ATCC 51449 1492596 NP_860439.1 CDS HH0908 NC_004917.1 881691 882740 D sialic acid synthase 881691..882740 Helicobacter hepaticus ATCC 51449 1492597 NP_860440.1 CDS HH0909 NC_004917.1 882806 883921 D possible aminotransferase; hypothetical protein 882806..883921 Helicobacter hepaticus ATCC 51449 1492598 NP_860441.1 CDS miaA NC_004917.1 883938 884846 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 883938..884846 Helicobacter hepaticus ATCC 51449 1492599 NP_860442.1 CDS HH0911 NC_004917.1 884847 885248 R hypothetical protein complement(884847..885248) Helicobacter hepaticus ATCC 51449 1492600 NP_860443.1 CDS HH0912 NC_004917.1 885259 885951 R similar to Helicobacter pylori HP0920; predicted membrane-associated; hypothetical protein complement(885259..885951) Helicobacter hepaticus ATCC 51449 1492601 NP_860444.1 CDS HH0913 NC_004917.1 886069 887445 R possible ferredoxin-like protein; predicted membrane-associated; hypothetical protein complement(886069..887445) Helicobacter hepaticus ATCC 51449 1492602 NP_860445.1 CDS HH0914 NC_004917.1 887587 889197 D ATP-binding protein; ABC transport system 887587..889197 Helicobacter hepaticus ATCC 51449 1492603 NP_860446.1 CDS HH0915 NC_004917.1 889349 889552 R hypothetical protein complement(889349..889552) Helicobacter hepaticus ATCC 51449 1492604 NP_860447.1 CDS HH0916 NC_004917.1 889539 889829 R predicted secreted protein; hypothetical protein complement(889539..889829) Helicobacter hepaticus ATCC 51449 1492605 NP_860448.1 CDS HH0917 NC_004917.1 889910 890683 R hypothetical protein complement(889910..890683) Helicobacter hepaticus ATCC 51449 1492606 NP_860449.1 CDS HH0918 NC_004917.1 890890 891300 D hypothetical protein 890890..891300 Helicobacter hepaticus ATCC 51449 1492607 NP_860450.1 CDS HH0919 NC_004917.1 891878 892390 R similar to Helicobacter pylori HP0952; CinA/YgaD-like; hypothetical protein complement(891878..892390) Helicobacter hepaticus ATCC 51449 1492608 NP_860451.1 CDS HH0920 NC_004917.1 892487 893566 D similar to Campylobacter jejuni CJ0604; hypothetical protein 892487..893566 Helicobacter hepaticus ATCC 51449 1492609 NP_860452.1 CDS HH0921 NC_004917.1 893662 894405 D carbonic anhydrase 893662..894405 Helicobacter hepaticus ATCC 51449 1492610 NP_860453.1 CDS HH0922 NC_004917.1 894455 894784 D hypothetical protein 894455..894784 Helicobacter hepaticus ATCC 51449 1492611 NP_860454.1 CDS HH0923 NC_004917.1 894824 895498 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 894824..895498 Helicobacter hepaticus ATCC 51449 1492612 NP_860455.1 CDS HH0924 NC_004917.1 895498 895833 D similar to Helicobacter pylori JHP1403; predicted dihydroneopterin aldolase; hypothetical protein 895498..895833 Helicobacter hepaticus ATCC 51449 1492613 NP_860456.1 CDS HH0925 NC_004917.1 895838 896812 R hypothetical protein complement(895838..896812) Helicobacter hepaticus ATCC 51449 1492614 NP_860457.1 CDS gltX NC_004917.1 896888 898282 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(896888..898282) Helicobacter hepaticus ATCC 51449 1492615 NP_860458.1 CDS murG NC_004917.1 898426 899478 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 898426..899478 Helicobacter hepaticus ATCC 51449 1492616 NP_860459.1 CDS lexA NC_004917.1 899641 900399 D exodeoxyribonuclease LexA 899641..900399 Helicobacter hepaticus ATCC 51449 1492617 NP_860460.1 CDS HH0929 NC_004917.1 900423 901052 D possible uracil-DNA glycosylase; hypothetical protein 900423..901052 Helicobacter hepaticus ATCC 51449 1492618 NP_860461.1 CDS HH0930 NC_004917.1 902671 903975 D similar to Helicobacter pylori HP0275; predicted secreted protein; hypothetical protein 902671..903975 Helicobacter hepaticus ATCC 51449 1492619 NP_860462.1 CDS rep NC_004917.1 903972 906002 R ATP-dependent DNA helicase complement(903972..906002) Helicobacter hepaticus ATCC 51449 1492620 NP_860463.1 CDS HH0932 NC_004917.1 906013 906432 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(906013..906432) Helicobacter hepaticus ATCC 51449 1492621 NP_860464.1 CDS valS NC_004917.1 906508 909207 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 906508..909207 Helicobacter hepaticus ATCC 51449 1492622 NP_860465.1 CDS HH0934 NC_004917.1 909813 910949 D similar to Campylobacter jejuni CJ0760; hypothetical protein 909813..910949 Helicobacter hepaticus ATCC 51449 1492623 NP_860466.1 CDS rplS NC_004917.1 910958 911314 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(910958..911314) Helicobacter hepaticus ATCC 51449 1492624 NP_860467.1 CDS trmD NC_004917.1 911311 912036 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(911311..912036) Helicobacter hepaticus ATCC 51449 1492625 NP_860468.1 CDS HH0937 NC_004917.1 912033 912494 R hypothetical protein complement(912033..912494) Helicobacter hepaticus ATCC 51449 1492626 NP_860469.1 CDS HH0938 NC_004917.1 912581 912820 R similar to Campylobacter jejuni CJ0711; hypothetical protein complement(912581..912820) Helicobacter hepaticus ATCC 51449 1492627 NP_860470.1 CDS rpsP NC_004917.1 912836 913069 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(912836..913069) Helicobacter hepaticus ATCC 51449 1492628 NP_860471.1 CDS ffh NC_004917.1 913144 914487 R signal recognition particle protein complement(913144..914487) Helicobacter hepaticus ATCC 51449 1492629 NP_860472.1 CDS HH0941 NC_004917.1 914523 914633 D predicted membrane-associated; hypothetical protein 914523..914633 Helicobacter hepaticus ATCC 51449 1492630 NP_860473.1 CDS HH0942 NC_004917.1 914630 915040 D FurR family; transcriptional regulator 914630..915040 Helicobacter hepaticus ATCC 51449 1492631 NP_860474.1 CDS HH0943 NC_004917.1 915045 917090 R similar to Helicobacter pylori JHP0417; hypothetical protein complement(915045..917090) Helicobacter hepaticus ATCC 51449 1492632 NP_860475.1 CDS HH0944 NC_004917.1 917096 918154 R possible peptidase; hypothetical protein complement(917096..918154) Helicobacter hepaticus ATCC 51449 1492633 NP_860476.1 CDS HH0945 NC_004917.1 918155 918631 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(918155..918631) Helicobacter hepaticus ATCC 51449 1492634 NP_860477.1 CDS HH0946 NC_004917.1 918751 920421 R hypothetical protein complement(918751..920421) Helicobacter hepaticus ATCC 51449 1492635 NP_860478.1 CDS HH0947 NC_004917.1 920427 921578 R similar to Helicobacter pylori JHP0703; predicted membrane-associated; hypothetical protein complement(920427..921578) Helicobacter hepaticus ATCC 51449 1492636 NP_860479.1 CDS HH0948 NC_004917.1 921637 921912 R similar to Helicobacter pylori HP0764; hypothetical protein complement(921637..921912) Helicobacter hepaticus ATCC 51449 1492637 NP_860480.1 CDS HH0949 NC_004917.1 922013 922258 D hypothetical protein 922013..922258 Helicobacter hepaticus ATCC 51449 1492638 NP_860481.1 CDS bisC NC_004917.1 922405 924891 R biotin sulfoxide reductase BisC complement(922405..924891) Helicobacter hepaticus ATCC 51449 1492639 NP_860482.1 CDS HH0951 NC_004917.1 924891 925484 R similar to Campylobacter jejuni CJ0265c; predicted cytochrome c-type protein; hypothetical protein complement(924891..925484) Helicobacter hepaticus ATCC 51449 1492640 NP_860483.1 CDS HH0952 NC_004917.1 925592 926404 R similar to Helicobacter pylori HP0257; predicted secreted protein; hypothetical protein complement(925592..926404) Helicobacter hepaticus ATCC 51449 1492641 NP_860484.1 CDS HH0953 NC_004917.1 926401 926829 R similar to Caulobacter crescentus FliJ; similar to Helicobacter pylori HP0256; hypothetical protein complement(926401..926829) Helicobacter hepaticus ATCC 51449 1492642 NP_860485.1 CDS purA NC_004917.1 926836 928083 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(926836..928083) Helicobacter hepaticus ATCC 51449 1492643 NP_860486.1 CDS hisZ NC_004917.1 928113 928955 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase complement(928113..928955) Helicobacter hepaticus ATCC 51449 1492644 NP_860487.1 CDS mnmA NC_004917.1 929079 930116 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 929079..930116 Helicobacter hepaticus ATCC 51449 1492645 NP_860488.1 CDS HH0957 NC_004917.1 930235 930624 D similar to Helicobacter pylori replication protein A; hypothetical protein 930235..930624 Helicobacter hepaticus ATCC 51449 1492646 NP_860489.1 CDS HH0958 NC_004917.1 930633 930779 R hypothetical protein complement(930633..930779) Helicobacter hepaticus ATCC 51449 1492647 NP_860490.1 CDS HH0959 NC_004917.1 930886 931284 D hypothetical protein 930886..931284 Helicobacter hepaticus ATCC 51449 1492648 NP_860491.1 CDS HH0960 NC_004917.1 931337 931993 D predicted membrane-associated; hypothetical protein 931337..931993 Helicobacter hepaticus ATCC 51449 1492649 NP_860492.1 CDS HH0961 NC_004917.1 932075 932242 D predicted secreted protein; hypothetical protein 932075..932242 Helicobacter hepaticus ATCC 51449 1492650 NP_860493.1 CDS HH0962 NC_004917.1 933061 933525 R predicted membrane-associated; hypothetical protein complement(933061..933525) Helicobacter hepaticus ATCC 51449 1492651 NP_860494.1 CDS HH0963 NC_004917.1 933509 933943 R similar to Campylobacter jejuni integral membrane protein; predicted membrane-associated; hypothetical protein complement(933509..933943) Helicobacter hepaticus ATCC 51449 1492652 NP_860495.1 CDS hemL NC_004917.1 933946 935253 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(933946..935253) Helicobacter hepaticus ATCC 51449 1492653 NP_860496.1 CDS HH0965 NC_004917.1 935277 935369 D predicted secreted protein; hypothetical protein 935277..935369 Helicobacter hepaticus ATCC 51449 1492654 NP_860497.1 CDS HH0966 NC_004917.1 935462 936022 D similar to Campylobacter jejuni periplasmic protein; hypothetical protein 935462..936022 Helicobacter hepaticus ATCC 51449 1492655 NP_860498.1 CDS HH0967 NC_004917.1 936181 937902 D hypothetical protein 936181..937902 Helicobacter hepaticus ATCC 51449 1492656 NP_860499.1 CDS HH0968 NC_004917.1 938005 938538 R hypothetical protein complement(938005..938538) Helicobacter hepaticus ATCC 51449 1492657 NP_860500.1 CDS argD NC_004917.1 938727 939926 D catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 938727..939926 Helicobacter hepaticus ATCC 51449 1492658 NP_860501.1 CDS HH0970 NC_004917.1 939907 941004 D similar to Helicobacter pylori HP0812; hypothetical protein 939907..941004 Helicobacter hepaticus ATCC 51449 1492659 NP_860502.1 CDS HH0971 NC_004917.1 941085 943076 D similar to Campylobacter jejuni methyl-accepting chemotaxis signal transduction protein; hypothetical protein 941085..943076 Helicobacter hepaticus ATCC 51449 1492660 NP_860503.1 CDS HH0972 NC_004917.1 943104 944147 R hypothetical protein complement(943104..944147) Helicobacter hepaticus ATCC 51449 1492661 NP_860504.1 CDS HH0973 NC_004917.1 944229 945089 R similar to Campylobacter jejuni CJ20248; hypothetical protein complement(944229..945089) Helicobacter hepaticus ATCC 51449 1492662 NP_860505.1 CDS HH0974 NC_004917.1 945230 946540 R similar to Helicobacter pylori JHP0611; predicted glycerol-3-phosphate dehydrogenase GlpC; hypothetical protein complement(945230..946540) Helicobacter hepaticus ATCC 51449 1492663 NP_860506.1 CDS hemN_1 NC_004917.1 946550 947938 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(946550..947938) Helicobacter hepaticus ATCC 51449 1492664 NP_860507.1 CDS HH0976 NC_004917.1 947953 948384 R similar to Helicobacter pylori HP0664; hypothetical protein complement(947953..948384) Helicobacter hepaticus ATCC 51449 1492665 NP_860508.1 CDS argF NC_004917.1 948388 949377 R ornithine carbamoyltransferase complement(948388..949377) Helicobacter hepaticus ATCC 51449 1492666 NP_860509.1 CDS HH0978 NC_004917.1 949453 950025 R similar to Helicobacter pylori HP0838; predicted secreted protein; hypothetical protein complement(949453..950025) Helicobacter hepaticus ATCC 51449 1492667 NP_860510.1 CDS HH0979 NC_004917.1 950049 950747 R similar to Campylobacter jejuni lipoprotein; hypothetical protein complement(950049..950747) Helicobacter hepaticus ATCC 51449 1492668 NP_860511.1 CDS HH0980 NC_004917.1 951092 951847 R predicted glycosyl transferase; hypothetical protein complement(951092..951847) Helicobacter hepaticus ATCC 51449 1492669 NP_860512.1 CDS HH0981 NC_004917.1 951837 952838 R glucosyl transferase; hypothetical protein complement(951837..952838) Helicobacter hepaticus ATCC 51449 1492670 NP_860513.1 CDS HH0982 NC_004917.1 958823 959767 R acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; essential for survival; plays a role in cell responses to environmental changes; lipid A biosynthesis lauroyl acyltransferase complement(958823..959767) Helicobacter hepaticus ATCC 51449 1492671 NP_860514.1 CDS HH0983 NC_004917.1 959767 960861 R lipopolysaccharide heptosyltransferase complement(959767..960861) Helicobacter hepaticus ATCC 51449 1492672 NP_860515.1 CDS ppx NC_004917.1 960885 962357 R exopolyphosphatase complement(960885..962357) Helicobacter hepaticus ATCC 51449 1492673 NP_860516.1 CDS fdxB NC_004917.1 962357 962608 R ferredoxin complement(962357..962608) Helicobacter hepaticus ATCC 51449 1492674 NP_860517.1 CDS HH0986 NC_004917.1 962680 963330 R hypothetical protein complement(962680..963330) Helicobacter hepaticus ATCC 51449 1492675 NP_860518.1 CDS HH0987 NC_004917.1 963348 963455 R predicted membrane-associated; hypothetical protein complement(963348..963455) Helicobacter hepaticus ATCC 51449 1492676 NP_860519.1 CDS HH0988 NC_004917.1 963965 964069 R similar to Campylobacter jejuni periplasmic protein; hypothetical protein complement(963965..964069) Helicobacter hepaticus ATCC 51449 1492677 NP_860520.1 CDS HH0989 NC_004917.1 964113 965051 D similar to Campylobacter jejuni CJ504c; hypothetical protein 964113..965051 Helicobacter hepaticus ATCC 51449 1492678 NP_860521.1 CDS HH0990 NC_004917.1 965008 966270 R similar to Helicobacter pylori JHP0602; predicted protease; hypothetical protein complement(965008..966270) Helicobacter hepaticus ATCC 51449 1492679 NP_860522.1 CDS HH0991 NC_004917.1 966321 967421 R similar to Helicobacter pylori JHP0601; hypothetical protein complement(966321..967421) Helicobacter hepaticus ATCC 51449 1492680 NP_860523.1 CDS HH0992 NC_004917.1 967445 969682 R hypothetical protein complement(967445..969682) Helicobacter hepaticus ATCC 51449 1492681 NP_860524.1 CDS tyrA NC_004917.1 969751 970599 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(969751..970599) Helicobacter hepaticus ATCC 51449 1492682 NP_860525.1 CDS HH0994 NC_004917.1 970627 971337 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(970627..971337) Helicobacter hepaticus ATCC 51449 1492683 NP_860526.1 CDS HH0995 NC_004917.1 971338 971766 R similar to Helicobacter pylori HP0375; predicted membrane-associated; hypothetical protein complement(971338..971766) Helicobacter hepaticus ATCC 51449 1492684 NP_860527.1 CDS hemH NC_004917.1 971883 972818 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 971883..972818 Helicobacter hepaticus ATCC 51449 1492685 NP_860528.1 CDS HH0997 NC_004917.1 972844 973464 D similar to Helicobacter pylori HP0377; predicted membrane-associated; hypothetical protein 972844..973464 Helicobacter hepaticus ATCC 51449 1492686 NP_860529.1 CDS HH0998 NC_004917.1 973476 976286 D cytochrome c biogenesis protein 973476..976286 Helicobacter hepaticus ATCC 51449 1492687 NP_860530.1 CDS HH0999 NC_004917.1 976341 978386 D predicted secreted protein; hypothetical protein 976341..978386 Helicobacter hepaticus ATCC 51449 1492688 NP_860531.1 CDS HH1000 NC_004917.1 978924 979496 R similar to Helicobacter pylori HP1162; predicted membrane-associated; hypothetical protein complement(978924..979496) Helicobacter hepaticus ATCC 51449 1492689 NP_860532.1 CDS ybbA NC_004917.1 979529 980221 R ATP-binding component; ABC transporter complement(979529..980221) Helicobacter hepaticus ATCC 51449 1492690 NP_860533.1 CDS HH1002 NC_004917.1 980385 980918 D similar to Helicobacter pylori secreted protein; hypothetical protein 980385..980918 Helicobacter hepaticus ATCC 51449 1492691 NP_860534.1 CDS HH1003 NC_004917.1 980432 980923 R similar to Helicobacter pylori JHP1206; predicted secreted protein; hypothetical protein complement(980432..980923) Helicobacter hepaticus ATCC 51449 1492692 NP_860535.1 CDS HH1004 NC_004917.1 981080 981193 R hypothetical protein complement(981080..981193) Helicobacter hepaticus ATCC 51449 1492693 NP_860536.1 CDS HH1005 NC_004917.1 981360 982226 R similar to two-component response regulator proteins; hypothetical protein complement(981360..982226) Helicobacter hepaticus ATCC 51449 1492694 NP_860537.1 CDS HH1006 NC_004917.1 982465 983694 R cytochrome b subunit; ubiquinol cytochrome c oxidoreductase complement(982465..983694) Helicobacter hepaticus ATCC 51449 1492695 NP_860538.1 CDS HH1007 NC_004917.1 983704 984213 R 2Fe-2S subunit; ubiquinol cytochrome C oxidoreductase complement(983704..984213) Helicobacter hepaticus ATCC 51449 1492696 NP_860539.1 CDS nadE NC_004917.1 984364 985188 D NH(3)-dependent NAD(+) synthetase NadE 984364..985188 Helicobacter hepaticus ATCC 51449 1492697 NP_860540.1 CDS lpxK NC_004917.1 985198 986100 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 985198..986100 Helicobacter hepaticus ATCC 51449 1492698 NP_860541.1 CDS bcp NC_004917.1 986130 986588 D bacterioferritin comigratory protein Bcp 986130..986588 Helicobacter hepaticus ATCC 51449 1492699 NP_860542.1 CDS infB NC_004917.1 986623 989271 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(986623..989271) Helicobacter hepaticus ATCC 51449 1492700 NP_860543.1 CDS HH1012 NC_004917.1 989259 989510 R similar to Helicobacter pylori HP1049; hypothetical protein complement(989259..989510) Helicobacter hepaticus ATCC 51449 1492701 NP_860544.1 CDS thrB NC_004917.1 989530 990429 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(989530..990429) Helicobacter hepaticus ATCC 51449 1492702 NP_860545.1 CDS HH1014 NC_004917.1 990546 991031 R similar to Helicobacter pylori JHP0374; hypothetical protein complement(990546..991031) Helicobacter hepaticus ATCC 51449 1492703 NP_860546.1 CDS lpxC NC_004917.1 991065 991964 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(991065..991964) Helicobacter hepaticus ATCC 51449 1492704 NP_860547.1 CDS minC NC_004917.1 991961 992557 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(991961..992557) Helicobacter hepaticus ATCC 51449 1492705 NP_860548.1 CDS HH1017 NC_004917.1 992571 993956 R similar to Campylobacter jejuni CJ0131; predicted secreted protein; hypothetical protein complement(992571..993956) Helicobacter hepaticus ATCC 51449 1492706 NP_860549.1 CDS flhB NC_004917.1 994014 995141 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB complement(994014..995141) Helicobacter hepaticus ATCC 51449 1492707 NP_860550.1 CDS mobA NC_004917.1 995145 995714 R MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein A complement(995145..995714) Helicobacter hepaticus ATCC 51449 1492708 NP_860551.1 CDS moaA NC_004917.1 995808 996806 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 995808..996806 Helicobacter hepaticus ATCC 51449 1492709 NP_860552.1 CDS HH1021 NC_004917.1 996902 997987 D similar to Campylobacter jejuni CJ1368; hypothetical protein 996902..997987 Helicobacter hepaticus ATCC 51449 1492710 NP_860553.1 CDS HH1022 NC_004917.1 998096 1000483 D P-type; CopA-like; cation-transporting ATPase 998096..1000483 Helicobacter hepaticus ATCC 51449 1492711 NP_860554.1 CDS HH1023 NC_004917.1 1000593 1001708 D similar to Campylobacter jejuni CJ0069; hypothetical protein 1000593..1001708 Helicobacter hepaticus ATCC 51449 1492712 NP_860555.1 CDS HH1024 NC_004917.1 1001785 1001988 R hypothetical protein complement(1001785..1001988) Helicobacter hepaticus ATCC 51449 1492713 NP_860556.1 CDS HH1025 NC_004917.1 1002152 1004662 D similar to Escherichia coli Z1202; predicted helicase; hypothetical protein 1002152..1004662 Helicobacter hepaticus ATCC 51449 1492714 NP_860557.1 CDS HH1026 NC_004917.1 1004715 1005527 R similar to Thermotoga maritima oxidoreductasealdo/keto reductase; hypothetical protein complement(1004715..1005527) Helicobacter hepaticus ATCC 51449 1492715 NP_860558.1 CDS HH1027 NC_004917.1 1005984 1006652 D similar to Escherichia coli YfcA; predicted membrane-associated; hypothetical protein 1005984..1006652 Helicobacter hepaticus ATCC 51449 1492716 NP_860559.1 CDS HH1028 NC_004917.1 1007202 1007378 D predicted secreted protein; hypothetical protein 1007202..1007378 Helicobacter hepaticus ATCC 51449 1492717 NP_860560.1 CDS HH1029 NC_004917.1 1007349 1009586 R hypothetical protein complement(1007349..1009586) Helicobacter hepaticus ATCC 51449 1492718 NP_860561.1 CDS HH1030 NC_004917.1 1009583 1011262 R predicted secreted protein; hypothetical protein complement(1009583..1011262) Helicobacter hepaticus ATCC 51449 1492719 NP_860562.1 CDS HH1031 NC_004917.1 1011450 1011923 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin complement(1011450..1011923) Helicobacter hepaticus ATCC 51449 1492720 NP_860563.1 CDS HH1032 NC_004917.1 1011898 1012296 R hypothetical protein complement(1011898..1012296) Helicobacter hepaticus ATCC 51449 1492721 NP_860564.1 CDS HH1033 NC_004917.1 1012403 1013440 R similar to Escherichia coli Z0347; predicted secreted protein; hypothetical protein complement(1012403..1013440) Helicobacter hepaticus ATCC 51449 1492722 NP_860565.1 CDS HH1034 NC_004917.1 1013457 1014530 R predicted oxidoreductase; hypothetical protein complement(1013457..1014530) Helicobacter hepaticus ATCC 51449 1492723 NP_860566.1 CDS HH1035 NC_004917.1 1014704 1015282 D hypothetical protein 1014704..1015282 Helicobacter hepaticus ATCC 51449 1492724 NP_860567.1 CDS HH1036 NC_004917.1 1015368 1015832 D predicted secreted protein; hypothetical protein 1015368..1015832 Helicobacter hepaticus ATCC 51449 1492725 NP_860568.1 CDS ogt NC_004917.1 1015879 1016391 D methylated DNA-protein cysteine methyltransferase 1015879..1016391 Helicobacter hepaticus ATCC 51449 1492726 NP_860569.1 CDS HH1038 NC_004917.1 1016511 1017746 D modification methylase; type II R/M system 1016511..1017746 Helicobacter hepaticus ATCC 51449 1492727 NP_860570.1 CDS HH1039 NC_004917.1 1017751 1019649 D hypothetical protein 1017751..1019649 Helicobacter hepaticus ATCC 51449 1492728 NP_860571.1 CDS HH1040 NC_004917.1 1019651 1021045 D hypothetical protein 1019651..1021045 Helicobacter hepaticus ATCC 51449 1492729 NP_860572.1 CDS HH1041 NC_004917.1 1021081 1021443 D hypothetical protein 1021081..1021443 Helicobacter hepaticus ATCC 51449 1492730 NP_860573.1 CDS HH1042 NC_004917.1 1021476 1022060 R predicted transcriptional regulator; hypothetical protein complement(1021476..1022060) Helicobacter hepaticus ATCC 51449 1492731 NP_860574.1 CDS HH1043 NC_004917.1 1022057 1022470 R hypothetical protein complement(1022057..1022470) Helicobacter hepaticus ATCC 51449 1492732 NP_860575.1 CDS HH1044 NC_004917.1 1022471 1023229 R hypothetical protein complement(1022471..1023229) Helicobacter hepaticus ATCC 51449 1492733 NP_860576.1 CDS HH1045 NC_004917.1 1023447 1024712 D predicted secreted protein; hypothetical protein 1023447..1024712 Helicobacter hepaticus ATCC 51449 1492734 NP_860577.1 CDS HH1046 NC_004917.1 1024751 1025416 D predicted acetyltransferase; hypothetical protein 1024751..1025416 Helicobacter hepaticus ATCC 51449 1492735 NP_860578.1 CDS HH1047 NC_004917.1 1025545 1025679 D hypothetical protein 1025545..1025679 Helicobacter hepaticus ATCC 51449 1492736 NP_860579.1 CDS rocF NC_004917.1 1025763 1026626 R arginase complement(1025763..1026626) Helicobacter hepaticus ATCC 51449 1492737 NP_860580.1 CDS HH1049 NC_004917.1 1026748 1027860 D predicted secreted protein; hypothetical protein 1026748..1027860 Helicobacter hepaticus ATCC 51449 1492738 NP_860581.1 CDS HH1050 NC_004917.1 1027876 1028889 R similar to Helicobacter pylori ulcer associated adenine specific DNA methyltransferase IceA; hypothetical protein complement(1027876..1028889) Helicobacter hepaticus ATCC 51449 1492739 NP_860582.1 CDS HH1051 NC_004917.1 1028893 1029567 R similar to Neisseria lactamica type II restriction endonuclease; hypothetical protein complement(1028893..1029567) Helicobacter hepaticus ATCC 51449 1492740 NP_860583.1 CDS HH1052 NC_004917.1 1029637 1029759 D hypothetical protein 1029637..1029759 Helicobacter hepaticus ATCC 51449 1492741 NP_860584.1 CDS HH1053 NC_004917.1 1029756 1029863 R hypothetical protein complement(1029756..1029863) Helicobacter hepaticus ATCC 51449 1492742 NP_860585.1 CDS HH1054 NC_004917.1 1029866 1030384 D similar to Listeria monocytogenes LMO2438; hypothetical protein 1029866..1030384 Helicobacter hepaticus ATCC 51449 1492743 NP_860586.1 CDS HH1055 NC_004917.1 1030381 1030503 R hypothetical protein complement(1030381..1030503) Helicobacter hepaticus ATCC 51449 1492744 NP_860587.1 CDS HH1056 NC_004917.1 1030508 1030915 R similar to Campylobacter jejuni CJ1556; hypothetical protein complement(1030508..1030915) Helicobacter hepaticus ATCC 51449 1492745 NP_860588.1 CDS HH1057 NC_004917.1 1031045 1031665 D similar to Campylobacter jejuni CJ1555c; hypothetical protein 1031045..1031665 Helicobacter hepaticus ATCC 51449 1492746 NP_860589.1 CDS HH1058 NC_004917.1 1031695 1031820 D predicted membrane-associated; hypothetical protein 1031695..1031820 Helicobacter hepaticus ATCC 51449 1492747 NP_860590.1 CDS HH1059 NC_004917.1 1031810 1032202 D predicted membrane-associated; hypothetical protein 1031810..1032202 Helicobacter hepaticus ATCC 51449 1492748 NP_860591.1 CDS HH1060 NC_004917.1 1032321 1032878 D similar to Listeria monocytogenes LMO2083; hypothetical protein 1032321..1032878 Helicobacter hepaticus ATCC 51449 1492749 NP_860592.1 CDS HH1061 NC_004917.1 1032985 1034748 D similar to Helicobacter pylori JHP0572; hypothetical protein 1032985..1034748 Helicobacter hepaticus ATCC 51449 1492750 NP_860593.1 CDS HH1062 NC_004917.1 1034767 1035177 D hypothetical protein 1034767..1035177 Helicobacter hepaticus ATCC 51449 1492751 NP_860594.1 CDS HH1063 NC_004917.1 1035272 1036153 D similar to Bacillus subtilis aminoglycoside 6-adenyltransferase AAD(6); hypothetical protein 1035272..1036153 Helicobacter hepaticus ATCC 51449 1492752 NP_860595.1 CDS HH1064 NC_004917.1 1036272 1037438 D predicted membrane-associated; hypothetical protein 1036272..1037438 Helicobacter hepaticus ATCC 51449 1492753 NP_860596.1 CDS HH1065 NC_004917.1 1037674 1038366 D predicted membrane-associated; hypothetical protein 1037674..1038366 Helicobacter hepaticus ATCC 51449 1492754 NP_860597.1 CDS HH1066 NC_004917.1 1038471 1039169 R similar to Helicobacter pylori JHP0907; predicted secreted protein; hypothetical protein complement(1038471..1039169) Helicobacter hepaticus ATCC 51449 1492755 NP_860598.1 CDS glyS NC_004917.1 1039241 1041352 D glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1039241..1041352 Helicobacter hepaticus ATCC 51449 1492756 NP_860599.1 CDS HH1068 NC_004917.1 1041349 1042470 D similar to Helicobacter pylori HP1486; hypothetical protein 1041349..1042470 Helicobacter hepaticus ATCC 51449 1492757 NP_860600.1 CDS HH1069 NC_004917.1 1042614 1042838 D hypothetical protein 1042614..1042838 Helicobacter hepaticus ATCC 51449 1492758 NP_860601.1 CDS HH1070 NC_004917.1 1042847 1043611 R predicted membrane-associated; hypothetical protein complement(1042847..1043611) Helicobacter hepaticus ATCC 51449 1492759 NP_860602.1 CDS tsf NC_004917.1 1043638 1044705 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1043638..1044705) Helicobacter hepaticus ATCC 51449 1492760 NP_860603.1 CDS rpsB NC_004917.1 1044707 1045501 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1044707..1045501) Helicobacter hepaticus ATCC 51449 1492761 NP_860604.1 CDS HH1073 NC_004917.1 1045584 1045679 D hypothetical protein 1045584..1045679 Helicobacter hepaticus ATCC 51449 1492762 NP_860605.1 CDS rpoN NC_004917.1 1045704 1047014 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(1045704..1047014) Helicobacter hepaticus ATCC 51449 1492763 NP_860606.1 CDS yhbG NC_004917.1 1047011 1047733 R ABC-transporter ATP-binding protein complement(1047011..1047733) Helicobacter hepaticus ATCC 51449 1492764 NP_860607.1 CDS HH1076 NC_004917.1 1047730 1048164 R similar to Helicobacter pylori HP0716; hypothetical protein complement(1047730..1048164) Helicobacter hepaticus ATCC 51449 1492765 NP_860608.1 CDS dnaX NC_004917.1 1048157 1049752 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau complement(1048157..1049752) Helicobacter hepaticus ATCC 51449 1492766 NP_860609.1 CDS HH1078 NC_004917.1 1049733 1049843 D hypothetical protein 1049733..1049843 Helicobacter hepaticus ATCC 51449 1492767 NP_860610.1 CDS HH1079 NC_004917.1 1049898 1050530 R similar to Campylobacter jejuni CJ0593c; predicted membrane-associated; hypothetical protein complement(1049898..1050530) Helicobacter hepaticus ATCC 51449 1492768 NP_860611.1 CDS HH1080 NC_004917.1 1050591 1050707 D hypothetical protein 1050591..1050707 Helicobacter hepaticus ATCC 51449 1492769 NP_860612.1 CDS flgG NC_004917.1 1050682 1051470 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1050682..1051470 Helicobacter hepaticus ATCC 51449 1492770 NP_860613.1 CDS HH1082 NC_004917.1 1051483 1052742 R similar to Campylobacter jejuni CJ0609c; hypothetical protein complement(1051483..1052742) Helicobacter hepaticus ATCC 51449 1492771 NP_860614.1 CDS HH1083 NC_004917.1 1052733 1054055 R similar to Campylobacter jejuni periplasmic protein CJ0610c; hypothetical protein complement(1052733..1054055) Helicobacter hepaticus ATCC 51449 1492772 NP_860615.1 CDS HH1084 NC_004917.1 1054098 1055510 R predicted membrane-associated; hypothetical protein complement(1054098..1055510) Helicobacter hepaticus ATCC 51449 1492773 NP_860616.1 CDS HH1085 NC_004917.1 1055672 1056340 R predicted membrane-associated; hypothetical protein complement(1055672..1056340) Helicobacter hepaticus ATCC 51449 1492774 NP_860617.1 CDS HH1086 NC_004917.1 1056454 1057668 R similar to Xylella fastidiosa XF1738; predicted membrane-associated; hypothetical protein complement(1056454..1057668) Helicobacter hepaticus ATCC 51449 1492775 NP_860618.1 CDS HH1087 NC_004917.1 1057760 1058146 R possible transcriptional regulator; hypothetical protein complement(1057760..1058146) Helicobacter hepaticus ATCC 51449 1492776 NP_860619.1 CDS HH1088 NC_004917.1 1058232 1060208 R similar to Campylobacter jejuni methyl-accepting chemotaxis signal transduction protein CJ1564; hypothetical protein complement(1058232..1060208) Helicobacter hepaticus ATCC 51449 1492777 NP_860620.1 CDS HH1089 NC_004917.1 1060339 1060446 D hypothetical protein 1060339..1060446 Helicobacter hepaticus ATCC 51449 1492778 NP_860621.1 CDS flgG_1 NC_004917.1 1060468 1061301 D similar to HP1092 (FlgG1/FlgF); flagellar distal rod protein FlgG 1060468..1061301 Helicobacter hepaticus ATCC 51449 1492779 NP_860622.1 CDS HH1091 NC_004917.1 1061331 1063022 D modification subunit; type I restriction enzyme 1061331..1063022 Helicobacter hepaticus ATCC 51449 1492780 NP_860623.1 CDS HH1092 NC_004917.1 1063023 1063538 D hypothetical protein 1063023..1063538 Helicobacter hepaticus ATCC 51449 1492781 NP_860624.1 CDS HH1093 NC_004917.1 1063535 1064248 D similar to Helicobacter pylori HP1221; hypothetical protein 1063535..1064248 Helicobacter hepaticus ATCC 51449 1492782 NP_860625.1 CDS HH1094 NC_004917.1 1064330 1065544 D malate oxidoreductase 1064330..1065544 Helicobacter hepaticus ATCC 51449 1492783 NP_860626.1 CDS HH1095 NC_004917.1 1065853 1065990 R hypothetical protein complement(1065853..1065990) Helicobacter hepaticus ATCC 51449 1492784 NP_860627.1 CDS HH1096 NC_004917.1 1066084 1066548 R hypothetical protein complement(1066084..1066548) Helicobacter hepaticus ATCC 51449 1492785 NP_860628.1 CDS HH1097 NC_004917.1 1066717 1067298 R predicted secreted protein; hypothetical protein complement(1066717..1067298) Helicobacter hepaticus ATCC 51449 1492786 NP_860629.1 CDS HH1098 NC_004917.1 1067292 1068890 R similar to Helicobacter pylori HP1507; hypothetical protein complement(1067292..1068890) Helicobacter hepaticus ATCC 51449 1492787 NP_860630.1 CDS lpxD NC_004917.1 1069035 1070015 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1069035..1070015 Helicobacter hepaticus ATCC 51449 1492788 NP_860631.1 CDS sdaC NC_004917.1 1070053 1071432 D serine transporter 1070053..1071432 Helicobacter hepaticus ATCC 51449 1492789 NP_860632.1 CDS HH1101 NC_004917.1 1071438 1071545 R predicted membrane-associated; hypothetical protein complement(1071438..1071545) Helicobacter hepaticus ATCC 51449 1492790 NP_860633.1 CDS cydB NC_004917.1 1071562 1072686 R subunit II; cytochrome bd quinol oxidase complement(1071562..1072686) Helicobacter hepaticus ATCC 51449 1493155 NP_860634.1 CDS cydA NC_004917.1 1072686 1074260 R subunit I; cytochrome bd quinol oxidase complement(1072686..1074260) Helicobacter hepaticus ATCC 51449 1492791 NP_860635.1 CDS HH1104 NC_004917.1 1074287 1074538 R similar to Campylobacter jejuni CJ0080; hypothetical protein complement(1074287..1074538) Helicobacter hepaticus ATCC 51449 1492792 NP_860636.1 CDS HH1105 NC_004917.1 1074682 1077012 D similar to Campylobacter jejuni CJ0411; predicted ATP/GTP binding protein; hypothetical protein 1074682..1077012 Helicobacter hepaticus ATCC 51449 1492793 NP_860637.1 CDS HH1106 NC_004917.1 1077025 1078869 D similar to Campylobacter jejuni CJ0412; predicted ATP/GTP binding protein; hypothetical protein 1077025..1078869 Helicobacter hepaticus ATCC 51449 1492794 NP_860638.1 CDS HH1107 NC_004917.1 1078876 1079049 D predicted secreted protein; hypothetical protein 1078876..1079049 Helicobacter hepaticus ATCC 51449 1492795 NP_860639.1 CDS HH1108 NC_004917.1 1079084 1079263 D hypothetical protein 1079084..1079263 Helicobacter hepaticus ATCC 51449 1492796 NP_860640.1 CDS HH1109 NC_004917.1 1079407 1080597 R similar to Campylobacter jejuni efflux protein CJ1687; hypothetical protein complement(1079407..1080597) Helicobacter hepaticus ATCC 51449 1492797 NP_860641.1 CDS dnaA NC_004917.1 1080619 1081989 R binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA complement(1080619..1081989) Helicobacter hepaticus ATCC 51449 1492798 NP_860642.1 CDS ruvC NC_004917.1 1082089 1082646 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1082089..1082646 Helicobacter hepaticus ATCC 51449 1492799 NP_860643.1 CDS HH1112 NC_004917.1 1082643 1084046 D predicted membrane-associated; hypothetical protein 1082643..1084046 Helicobacter hepaticus ATCC 51449 1492800 NP_860644.1 CDS HH1113 NC_004917.1 1084036 1084674 D predicted membrane-associated; hypothetical protein 1084036..1084674 Helicobacter hepaticus ATCC 51449 1492801 NP_860645.1 CDS HH1114 NC_004917.1 1084671 1085057 D predicted secreted protein; hypothetical protein 1084671..1085057 Helicobacter hepaticus ATCC 51449 1492802 NP_860646.1 CDS HH1115 NC_004917.1 1085054 1086655 D similar to Neisseria meningitidis pilin PilQ; hypothetical protein 1085054..1086655 Helicobacter hepaticus ATCC 51449 1492803 NP_860647.1 CDS gspE NC_004917.1 1086655 1088223 D similar to Neisseria meningitidis pilin PilT; hypothetical protein 1086655..1088223 Helicobacter hepaticus ATCC 51449 1492804 NP_860648.1 CDS HH1117 NC_004917.1 1088211 1089455 D similar to Neisseria meningitidis pilin PilG; hypothetical protein 1088211..1089455 Helicobacter hepaticus ATCC 51449 1492805 NP_860649.1 CDS HH1118 NC_004917.1 1089442 1090548 R hypothetical protein complement(1089442..1090548) Helicobacter hepaticus ATCC 51449 1492806 NP_860650.1 CDS HH1119 NC_004917.1 1090590 1090733 D hypothetical protein 1090590..1090733 Helicobacter hepaticus ATCC 51449 1492807 NP_860651.2 CDS thyX NC_004917.1 1090633 1091283 D flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 1090633..1091283 Helicobacter hepaticus ATCC 51449 1492808 NP_860652.1 CDS HH1121 NC_004917.1 1091289 1091885 R hypothetical protein complement(1091289..1091885) Helicobacter hepaticus ATCC 51449 1492809 NP_860653.1 CDS HH1122 NC_004917.1 1091882 1092658 R similar to Helicobacter pylori HP1464; predicted membrane-associated; hypothetical protein complement(1091882..1092658) Helicobacter hepaticus ATCC 51449 1492810 NP_860654.1 CDS HH1123 NC_004917.1 1092643 1093449 R ATP-binding component; ABC transporter complement(1092643..1093449) Helicobacter hepaticus ATCC 51449 1492811 NP_860655.1 CDS HH1124 NC_004917.1 1093446 1094492 R similar to Helicobacter pylori HP1466; predicted ABC transporter; hypothetical protein complement(1093446..1094492) Helicobacter hepaticus ATCC 51449 1492812 NP_860656.1 CDS HH1125 NC_004917.1 1094687 1094791 D predicted membrane-associated; hypothetical protein 1094687..1094791 Helicobacter hepaticus ATCC 51449 1492813 NP_860657.1 CDS dnaN NC_004917.1 1094815 1095876 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1094815..1095876 Helicobacter hepaticus ATCC 51449 1492814 NP_860658.1 CDS gyrB NC_004917.1 1095901 1098219 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 1095901..1098219 Helicobacter hepaticus ATCC 51449 1492815 NP_860659.1 CDS HH1128 NC_004917.1 1098232 1099386 R predicted secreted protein; hypothetical protein complement(1098232..1099386) Helicobacter hepaticus ATCC 51449 1492816 NP_860660.1 CDS HH1129 NC_004917.1 1099396 1100643 R may become fused with HH1130 due to slipped strand mispairing; alginate O- acetylation protein complement(1099396..1100643) Helicobacter hepaticus ATCC 51449 1492817 NP_860661.1 CDS HH1130 NC_004917.1 1100834 1101136 R may become fused with HH1129 due to slipped strand mispairing; alginate O- acetylation protein complement(1100834..1101136) Helicobacter hepaticus ATCC 51449 1492818 NP_860662.1 CDS HH1131 NC_004917.1 1101120 1101302 R predicted membrane-associated; hypothetical protein complement(1101120..1101302) Helicobacter hepaticus ATCC 51449 1492819 NP_860663.1 CDS HH1132 NC_004917.1 1101305 1101466 R hypothetical protein complement(1101305..1101466) Helicobacter hepaticus ATCC 51449 1492820 NP_860664.1 CDS HH1133 NC_004917.1 1101584 1101727 R predicted secreted protein; hypothetical protein complement(1101584..1101727) Helicobacter hepaticus ATCC 51449 1492821 NP_860665.1 CDS leuB NC_004917.1 1101727 1102677 R isopropylmalate dehydrogenase complement(1101727..1102677) Helicobacter hepaticus ATCC 51449 1492822 NP_860666.1 CDS leuD NC_004917.1 1102817 1103314 R small subunit; 3-isopropylmalate dehydratase complement(1102817..1103314) Helicobacter hepaticus ATCC 51449 1492823 NP_860667.1 CDS leuC NC_004917.1 1103370 1104632 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit complement(1103370..1104632) Helicobacter hepaticus ATCC 51449 1492824 NP_860668.1 CDS leuA NC_004917.1 1104648 1106324 R 2-isopropylmalate synthase complement(1104648..1106324) Helicobacter hepaticus ATCC 51449 1492825 NP_860669.1 CDS HH1138 NC_004917.1 1106493 1106693 R hypothetical protein complement(1106493..1106693) Helicobacter hepaticus ATCC 51449 1492826 NP_860670.1 CDS HH1139 NC_004917.1 1106723 1106827 D hypothetical protein 1106723..1106827 Helicobacter hepaticus ATCC 51449 1492827 NP_860671.1 CDS tal NC_004917.1 1106917 1107765 D Important for the balance of metabolites in the pentose-phosphate pathway; transaldolase 1106917..1107765 Helicobacter hepaticus ATCC 51449 1492828 NP_860672.1 CDS HH1141 NC_004917.1 1107776 1108522 R similar to Helicobacter pylori HP0231; possible protein disulfide isomerase; hypothetical protein complement(1107776..1108522) Helicobacter hepaticus ATCC 51449 1492829 NP_860673.1 CDS folK NC_004917.1 1108600 1109127 D 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 1108600..1109127 Helicobacter hepaticus ATCC 51449 1492830 NP_860674.1 CDS flhF NC_004917.1 1109219 1110670 D positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 1109219..1110670 Helicobacter hepaticus ATCC 51449 1492831 NP_860675.1 CDS HH1144 NC_004917.1 1110683 1111555 D similar to Helicobacter pylori HP1034; predicted ATP-binding protein; hypothetical protein 1110683..1111555 Helicobacter hepaticus ATCC 51449 1492832 NP_860676.1 CDS HH1145 NC_004917.1 1111580 1111936 D similar to Helicobacter pylori JHP0391; predicted membrane-associated; hypothetical protein 1111580..1111936 Helicobacter hepaticus ATCC 51449 1492833 NP_860677.2 CDS fliA NC_004917.1 1111948 1112655 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 1111948..1112655 Helicobacter hepaticus ATCC 51449 1492834 NP_860678.1 CDS fliM NC_004917.1 1112648 1113709 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 1112648..1113709 Helicobacter hepaticus ATCC 51449 1492835 NP_860679.1 CDS fliY NC_004917.1 1113706 1114542 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliY 1113706..1114542 Helicobacter hepaticus ATCC 51449 1492836 NP_860680.1 CDS HH1149 NC_004917.1 1114619 1114822 R predicted membrane-associated; hypothetical protein complement(1114619..1114822) Helicobacter hepaticus ATCC 51449 1492837 NP_860681.1 CDS HH1150 NC_004917.1 1114921 1115544 D hypothetical protein 1114921..1115544 Helicobacter hepaticus ATCC 51449 1492838 NP_860682.1 CDS HH1151 NC_004917.1 1115558 1116892 D hypothetical protein 1115558..1116892 Helicobacter hepaticus ATCC 51449 1492839 NP_860683.1 CDS HH1152 NC_004917.1 1116993 1117568 D predicted membrane-associated; hypothetical protein 1116993..1117568 Helicobacter hepaticus ATCC 51449 1492840 NP_860684.1 CDS trxB_2 NC_004917.1 1117565 1118536 R similar to Helicobacter pylori HP1164; predicted thioredoxin reductase; hypothetical protein complement(1117565..1118536) Helicobacter hepaticus ATCC 51449 1492841 NP_860685.1 CDS HH1154 NC_004917.1 1118529 1118753 R similar to Helicobacter pylori HP1163; predicted secreted protein; hypothetical protein complement(1118529..1118753) Helicobacter hepaticus ATCC 51449 1492842 NP_860686.1 CDS HH1155 NC_004917.1 1118909 1120579 D similar to methyl-accepting chemotaxis proteins; hypothetical protein 1118909..1120579 Helicobacter hepaticus ATCC 51449 1492843 NP_860687.1 CDS recG NC_004917.1 1120604 1122490 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(1120604..1122490) Helicobacter hepaticus ATCC 51449 1492844 NP_860688.1 CDS gap_1 NC_004917.1 1122499 1123515 R glyceraldehyde-3-phosphate dehydrogenase complement(1122499..1123515) Helicobacter hepaticus ATCC 51449 1492845 NP_860689.1 CDS HH1158 NC_004917.1 1123611 1124375 D predicted secreted protein; hypothetical protein 1123611..1124375 Helicobacter hepaticus ATCC 51449 1492846 NP_860690.1 CDS HH1159 NC_004917.1 1124383 1126425 R similar to Pseudomonas aeruginosa PA1689; predicted membrane-associated; hypothetical protein complement(1124383..1126425) Helicobacter hepaticus ATCC 51449 1492847 NP_860691.1 CDS trxA_1 NC_004917.1 1126570 1126884 R thioredoxin complement(1126570..1126884) Helicobacter hepaticus ATCC 51449 1492848 NP_860692.1 CDS HH1161 NC_004917.1 1126893 1127930 R similar to Campylobacter jejuni integral membrane protein; hypothetical protein complement(1126893..1127930) Helicobacter hepaticus ATCC 51449 1492849 NP_860693.1 CDS HH1162 NC_004917.1 1128275 1128880 R similar to Helicobacter pylori JHP1206; predicted secreted protein; hypothetical protein complement(1128275..1128880) Helicobacter hepaticus ATCC 51449 1492850 NP_860694.1 CDS HH1163 NC_004917.1 1128891 1129388 R predicted transcriptional regulator; hypothetical protein complement(1128891..1129388) Helicobacter hepaticus ATCC 51449 1492851 NP_860695.1 CDS HH1164 NC_004917.1 1129446 1129655 D hypothetical protein 1129446..1129655 Helicobacter hepaticus ATCC 51449 1492852 NP_860696.1 CDS HH1165 NC_004917.1 1129745 1132216 D similar to Helicobacter pylori HP0022; predicted membrane-associated; hypothetical protein 1129745..1132216 Helicobacter hepaticus ATCC 51449 1492853 NP_860697.1 CDS cad NC_004917.1 1132409 1133500 D NADP-dependent alcohol dehydrogenase 1132409..1133500 Helicobacter hepaticus ATCC 51449 1492854 NP_860698.1 CDS murD NC_004917.1 1133517 1134779 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(1133517..1134779) Helicobacter hepaticus ATCC 51449 1492855 NP_860699.1 CDS mraY NC_004917.1 1134789 1135868 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1134789..1135868) Helicobacter hepaticus ATCC 51449 1492856 NP_860700.1 CDS pgm NC_004917.1 1135976 1137448 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 1135976..1137448 Helicobacter hepaticus ATCC 51449 1492857 NP_860701.1 CDS HH1170 NC_004917.1 1137488 1138063 R similar to Campylobacter jejuni integral membrane protein CJ1356c; hypothetical protein complement(1137488..1138063) Helicobacter hepaticus ATCC 51449 1492858 NP_860702.1 CDS HH1171 NC_004917.1 1138204 1138443 R hypothetical protein complement(1138204..1138443) Helicobacter hepaticus ATCC 51449 1492859 NP_860703.1 CDS HH1172 NC_004917.1 1138476 1139444 R similar to Helicobacter pylori capsule biosynthesis protein KpsF (HP1429); hypothetical protein complement(1138476..1139444) Helicobacter hepaticus ATCC 51449 1492860 NP_860704.1 CDS HH1173 NC_004917.1 1139457 1141604 R similar to Helicobacter pylori HP1430; hypothetical protein complement(1139457..1141604) Helicobacter hepaticus ATCC 51449 1492861 NP_860705.1 CDS ksgA NC_004917.1 1141558 1142409 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(1141558..1142409) Helicobacter hepaticus ATCC 51449 1492862 NP_860706.1 CDS HH1175 NC_004917.1 1142449 1142547 D hypothetical protein 1142449..1142547 Helicobacter hepaticus ATCC 51449 1492863 NP_860707.1 CDS hisF NC_004917.1 1142585 1143340 D cyclase 1142585..1143340 Helicobacter hepaticus ATCC 51449 1492864 NP_860708.1 CDS HH1177 NC_004917.1 1143435 1144049 D similar to Helicobacter pylori HP1530; hypothetical protein 1143435..1144049 Helicobacter hepaticus ATCC 51449 1492865 NP_860709.1 CDS HH1178 NC_004917.1 1144064 1145173 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1144064..1145173 Helicobacter hepaticus ATCC 51449 1492866 NP_860710.1 CDS HH1179 NC_004917.1 1145202 1145297 D predicted membrane-associated; hypothetical protein 1145202..1145297 Helicobacter hepaticus ATCC 51449 1492867 NP_860711.1 CDS HH1180 NC_004917.1 1145332 1146438 D similar to Helicobacter pylori HP0100; hypothetical protein 1145332..1146438 Helicobacter hepaticus ATCC 51449 1492868 NP_860712.1 CDS fabZ NC_004917.1 1146482 1146991 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1146482..1146991 Helicobacter hepaticus ATCC 51449 1492869 NP_860713.1 CDS lpxA NC_004917.1 1147001 1147783 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1147001..1147783 Helicobacter hepaticus ATCC 51449 1492870 NP_860714.1 CDS clpX NC_004917.1 1147776 1149056 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1147776..1149056 Helicobacter hepaticus ATCC 51449 1492871 NP_860715.1 CDS mreB NC_004917.1 1149139 1150173 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1149139..1150173 Helicobacter hepaticus ATCC 51449 1492872 NP_860716.1 CDS mreC NC_004917.1 1150182 1151069 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1150182..1151069 Helicobacter hepaticus ATCC 51449 1492873 NP_860717.1 CDS HH1186 NC_004917.1 1150987 1153290 D hypothetical protein 1150987..1153290 Helicobacter hepaticus ATCC 51449 1492874 NP_860718.1 CDS HH1187 NC_004917.1 1153450 1154892 D predicted secreted protein; hypothetical protein 1153450..1154892 Helicobacter hepaticus ATCC 51449 1492875 NP_860719.1 CDS HH1188 NC_004917.1 1154913 1156160 D hypothetical protein 1154913..1156160 Helicobacter hepaticus ATCC 51449 1492876 NP_860720.1 CDS HH1189 NC_004917.1 1156157 1157095 R similar to Campylobacter jejuni CJ0021c; predicted isomerase; hypothetical protein complement(1156157..1157095) Helicobacter hepaticus ATCC 51449 1492877 NP_860721.1 CDS ileS NC_004917.1 1157210 1160002 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1157210..1160002 Helicobacter hepaticus ATCC 51449 1492878 NP_860722.1 CDS HH1191 NC_004917.1 1160044 1160190 D predicted membrane-associated; hypothetical protein 1160044..1160190 Helicobacter hepaticus ATCC 51449 1492879 NP_860723.1 CDS HH1192 NC_004917.1 1160206 1160730 R predicted secreted protein; hypothetical protein complement(1160206..1160730) Helicobacter hepaticus ATCC 51449 1492880 NP_860724.1 CDS HH1193 NC_004917.1 1160896 1161228 D similar to Campylobacter jejuni coiled-coil protein; hypothetical protein 1160896..1161228 Helicobacter hepaticus ATCC 51449 1492881 NP_860725.1 CDS HH1194 NC_004917.1 1161212 1161523 D similar to Helicobacter pylori HP1391; predicted membrane-associated; hypothetical protein 1161212..1161523 Helicobacter hepaticus ATCC 51449 1492882 NP_860726.1 CDS HH1195 NC_004917.1 1161593 1162441 D predicted secreted protein; hypothetical protein 1161593..1162441 Helicobacter hepaticus ATCC 51449 1492883 NP_860727.1 CDS HH1196 NC_004917.1 1162683 1164887 R isocitrate dehydrogenase complement(1162683..1164887) Helicobacter hepaticus ATCC 51449 1492884 NP_860728.1 CDS HH1197 NC_004917.1 1165034 1165243 R hypothetical protein complement(1165034..1165243) Helicobacter hepaticus ATCC 51449 1492885 NP_860729.1 CDS HH1198 NC_004917.1 1165389 1166435 R similar to Campylobacter jejuni CJ1633; hypothetical protein complement(1165389..1166435) Helicobacter hepaticus ATCC 51449 1492886 NP_860730.2 CDS dnaG NC_004917.1 1166413 1168071 R synthesizes RNA primers at the replication forks; DNA primase complement(1166413..1168071) Helicobacter hepaticus ATCC 51449 1492887 NP_860731.1 CDS groES NC_004917.1 1168356 1168628 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1168356..1168628 Helicobacter hepaticus ATCC 51449 1492888 NP_860732.1 CDS groEL NC_004917.1 1168662 1170299 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 1168662..1170299 Helicobacter hepaticus ATCC 51449 1492889 NP_860733.1 CDS HH1202 NC_004917.1 1170403 1171128 R hypothetical protein complement(1170403..1171128) Helicobacter hepaticus ATCC 51449 1492890 NP_860734.1 CDS ppc NC_004917.1 1171131 1173830 R phosphoenolpyruvate carboxylase complement(1171131..1173830) Helicobacter hepaticus ATCC 51449 1492891 NP_860735.1 CDS ilvC NC_004917.1 1173945 1174970 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1173945..1174970 Helicobacter hepaticus ATCC 51449 1492892 NP_860736.1 CDS ktrB NC_004917.1 1175065 1176465 D predicted Na+ or K+ uptake protein; hypothetical protein 1175065..1176465 Helicobacter hepaticus ATCC 51449 1492893 NP_860737.1 CDS ktrA NC_004917.1 1176490 1177149 D predicted potassium uptake protein; hypothetical protein 1176490..1177149 Helicobacter hepaticus ATCC 51449 1492894 NP_860738.1 CDS bioC NC_004917.1 1177139 1177900 R predicted biotin biosynthesis protein BioC; hypothetical protein complement(1177139..1177900) Helicobacter hepaticus ATCC 51449 1492895 NP_860739.1 CDS HH1208 NC_004917.1 1177879 1178574 R similar to Campylobacter jejuni CJ0305c; predicted membrane-associated; hypothetical protein complement(1177879..1178574) Helicobacter hepaticus ATCC 51449 1492896 NP_860740.1 CDS bioF NC_004917.1 1178571 1179767 R 8-amino-7-oxononanoate synthase complement(1178571..1179767) Helicobacter hepaticus ATCC 51449 1492897 NP_860741.1 CDS bioA NC_004917.1 1179847 1181160 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1179847..1181160 Helicobacter hepaticus ATCC 51449 1492898 NP_860742.1 CDS bioD NC_004917.1 1181162 1181791 R dethiobiotin synthetase complement(1181162..1181791) Helicobacter hepaticus ATCC 51449 1492899 NP_860743.1 CDS HH1212 NC_004917.1 1181829 1182758 R similar to Pseudomonas aeruginosa PA3954; hypothetical protein complement(1181829..1182758) Helicobacter hepaticus ATCC 51449 1492900 NP_860744.1 CDS HH1213 NC_004917.1 1182755 1182898 R hypothetical protein complement(1182755..1182898) Helicobacter hepaticus ATCC 51449 1492901 NP_860745.1 CDS HH1214 NC_004917.1 1182873 1183880 R similar to Bacillus halodurans BH0835; hypothetical protein complement(1182873..1183880) Helicobacter hepaticus ATCC 51449 1492902 NP_860746.1 CDS HH1215 NC_004917.1 1183870 1185315 R similar to Pseudomonas aeruginosa PA2326; hypothetical protein complement(1183870..1185315) Helicobacter hepaticus ATCC 51449 1492903 NP_860747.1 CDS HH1216 NC_004917.1 1185656 1185919 R predicted secreted protein; hypothetical protein complement(1185656..1185919) Helicobacter hepaticus ATCC 51449 1492904 NP_860748.1 CDS HH1217 NC_004917.1 1186029 1186238 D predicted secreted protein; hypothetical protein 1186029..1186238 Helicobacter hepaticus ATCC 51449 1492905 NP_860749.1 CDS cutA NC_004917.1 1186427 1186753 R divalent cation tolerance protein CutA complement(1186427..1186753) Helicobacter hepaticus ATCC 51449 1492906 NP_860750.1 CDS HH1219 NC_004917.1 1186887 1187861 D similar to Helicobacter pylori JHP0437; predicted catalase-like protein; hypothetical protein 1186887..1187861 Helicobacter hepaticus ATCC 51449 1492907 NP_860751.1 CDS HH1220 NC_004917.1 1187865 1188959 R similar to Vibrio cholerae VCA0834; predicted membrane-associated; hypothetical protein complement(1187865..1188959) Helicobacter hepaticus ATCC 51449 1492908 NP_860752.1 CDS argG NC_004917.1 1189082 1190296 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1189082..1190296 Helicobacter hepaticus ATCC 51449 1492909 NP_860753.1 CDS HH1222 NC_004917.1 1190297 1191814 D similar to Helicobacter pylori JHP0197; predicted secreted protein; hypothetical protein 1190297..1191814 Helicobacter hepaticus ATCC 51449 1492910 NP_860754.1 CDS minD NC_004917.1 1191873 1192688 D cell division inhibitor MinD 1191873..1192688 Helicobacter hepaticus ATCC 51449 1492911 NP_860755.1 CDS minE NC_004917.1 1192685 1192921 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 1192685..1192921 Helicobacter hepaticus ATCC 51449 1492912 NP_860756.1 CDS HH1225 NC_004917.1 1192918 1193034 R hypothetical protein complement(1192918..1193034) Helicobacter hepaticus ATCC 51449 1492913 NP_860757.1 CDS HH1226 NC_004917.1 1193051 1193920 D similar to Campylobacter jejuni periplasmic protein CJ0633; hypothetical protein 1193051..1193920 Helicobacter hepaticus ATCC 51449 1492914 NP_860758.1 CDS dprA NC_004917.1 1193930 1194721 D possibly involved in DNA uptake; DNA processing protein DprA 1193930..1194721 Helicobacter hepaticus ATCC 51449 1492915 NP_860759.1 CDS HH1228 NC_004917.1 1194781 1195122 D predicted membrane-associated; hypothetical protein 1194781..1195122 Helicobacter hepaticus ATCC 51449 1492916 NP_860760.1 CDS HH1229 NC_004917.1 1195122 1195538 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1195122..1195538 Helicobacter hepaticus ATCC 51449 1492917 NP_860761.1 CDS HH1230 NC_004917.1 1195703 1196137 D similar to Campylobacter jejuni integral membrane protein; hypothetical protein 1195703..1196137 Helicobacter hepaticus ATCC 51449 1492918 NP_860762.1 CDS HH1231 NC_004917.1 1196390 1197562 D predicted secreted protein; hypothetical protein 1196390..1197562 Helicobacter hepaticus ATCC 51449 1492919 NP_860763.1 CDS HH1232 NC_004917.1 1197567 1198058 R similar to Campylobacter jejuni CJ0121; metalloprotease complement(1197567..1198058) Helicobacter hepaticus ATCC 51449 1492920 NP_860764.1 CDS speA NC_004917.1 1198153 1200006 D catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1198153..1200006 Helicobacter hepaticus ATCC 51449 1492921 NP_860765.1 CDS cysE NC_004917.1 1200006 1200710 D serine acetyltransferase 1200006..1200710 Helicobacter hepaticus ATCC 51449 1492922 NP_860766.1 CDS HH1235 NC_004917.1 1200719 1201744 R similar to Helicobacter pylori HP0948; predicted membrane-associated; hypothetical protein complement(1200719..1201744) Helicobacter hepaticus ATCC 51449 1492923 NP_860767.1 CDS dksA NC_004917.1 1201744 1202100 R DnaK suppressor protein DskA complement(1201744..1202100) Helicobacter hepaticus ATCC 51449 1492924 NP_860768.2 CDS HH1237 NC_004917.1 1202110 1202571 R SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(1202110..1202571) Helicobacter hepaticus ATCC 51449 1492925 NP_860769.1 CDS accD NC_004917.1 1202543 1203421 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(1202543..1203421) Helicobacter hepaticus ATCC 51449 1492926 NP_860770.1 CDS suhB NC_004917.1 1203424 1204170 R similar to Campylobacter jejuni CJ0128c; predicted extragenic suppressor protein SuhB; hypothetical protein complement(1203424..1204170) Helicobacter hepaticus ATCC 51449 1492927 NP_860771.1 CDS HH1240 NC_004917.1 1204239 1204865 D similar to Helicobacter pylori HP0951; recombination protein RecO 1204239..1204865 Helicobacter hepaticus ATCC 51449 1492928 NP_860772.1 CDS gdhA NC_004917.1 1204978 1206330 D converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1204978..1206330 Helicobacter hepaticus ATCC 51449 1492929 NP_860773.1 CDS mutY NC_004917.1 1206415 1207467 R A/G-specific adenine glycosylase complement(1206415..1207467) Helicobacter hepaticus ATCC 51449 1492930 NP_860774.1 CDS ndh NC_004917.1 1207616 1208821 D NADH dehydrogenase Ndh 1207616..1208821 Helicobacter hepaticus ATCC 51449 1492931 NP_860775.1 CDS HH1244 NC_004917.1 1209054 1209737 D adenine-specific DNA methylase 1209054..1209737 Helicobacter hepaticus ATCC 51449 1492932 NP_860776.1 CDS purM NC_004917.1 1209808 1210815 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1209808..1210815 Helicobacter hepaticus ATCC 51449 1492933 NP_860777.1 CDS HH1246 NC_004917.1 1210831 1211622 D predicted secreted protein; hypothetical protein 1210831..1211622 Helicobacter hepaticus ATCC 51449 1492934 NP_860778.1 CDS aroE NC_004917.1 1211625 1212431 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 1211625..1212431 Helicobacter hepaticus ATCC 51449 1492935 NP_860779.1 CDS gatC NC_004917.1 1212487 1212765 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1212487..1212765 Helicobacter hepaticus ATCC 51449 1492936 NP_860780.1 CDS ung NC_004917.1 1212762 1213469 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1212762..1213469 Helicobacter hepaticus ATCC 51449 1492937 NP_860781.1 CDS kefB_2 NC_004917.1 1213476 1215173 R glutathione-regulated potassium-efflux system protein KefB complement(1213476..1215173) Helicobacter hepaticus ATCC 51449 1492938 NP_860782.1 CDS HH1251 NC_004917.1 1215345 1216604 D similar to Campylobacter jejuni CJ0846; predicted membrane-associated; hypothetical protein 1215345..1216604 Helicobacter hepaticus ATCC 51449 1492939 NP_860783.1 CDS HH1252 NC_004917.1 1216753 1217451 D similar to Campylobacter jejuni CJ0343c; predicted membrane-associated; hypothetical protein 1216753..1217451 Helicobacter hepaticus ATCC 51449 1492940 NP_860784.1 CDS HH1253 NC_004917.1 1217538 1217687 R hypothetical protein complement(1217538..1217687) Helicobacter hepaticus ATCC 51449 1492941 NP_860785.1 CDS HH1254 NC_004917.1 1217707 1218495 D similar to Campylobacter jejuni CJ1613c; hypothetical protein 1217707..1218495 Helicobacter hepaticus ATCC 51449 1492942 NP_860786.1 CDS HH1255 NC_004917.1 1218550 1219821 D similar to Helicobacter pylori HP0728; predicted PP-loop superfamily ATPase; hypothetical protein 1218550..1219821 Helicobacter hepaticus ATCC 51449 1492943 NP_860787.1 CDS fixN NC_004917.1 1219927 1221390 D CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 1219927..1221390 Helicobacter hepaticus ATCC 51449 1492944 NP_860788.1 CDS fixO NC_004917.1 1221406 1222146 D CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 1221406..1222146 Helicobacter hepaticus ATCC 51449 1492945 NP_860789.1 CDS fixQ NC_004917.1 1222143 1222373 D cb-type cytochrome C oxidase subunit IV 1222143..1222373 Helicobacter hepaticus ATCC 51449 1492946 NP_860790.1 CDS fixP NC_004917.1 1222370 1223242 D cb-type cytochrome C oxidase subunit III 1222370..1223242 Helicobacter hepaticus ATCC 51449 1492947 NP_860791.1 CDS HH1260 NC_004917.1 1223254 1223454 D similar to Campylobacter jejuni periplasmic protein; hypothetical protein 1223254..1223454 Helicobacter hepaticus ATCC 51449 1492948 NP_860792.1 CDS HH1261 NC_004917.1 1223464 1223571 D predicted membrane-associated; hypothetical protein 1223464..1223571 Helicobacter hepaticus ATCC 51449 1492949 NP_860793.1 CDS HH1262 NC_004917.1 1223575 1224249 D similar to Helicobacter pylori HP0149; predicted secreted protein; hypothetical protein 1223575..1224249 Helicobacter hepaticus ATCC 51449 1492950 NP_860794.1 CDS HH1263 NC_004917.1 1224266 1224898 D predicted secreted protein; hypothetical protein 1224266..1224898 Helicobacter hepaticus ATCC 51449 1492951 NP_860795.1 CDS HH1264 NC_004917.1 1224908 1225207 D predicted secreted protein; hypothetical protein 1224908..1225207 Helicobacter hepaticus ATCC 51449 1492952 NP_860796.1 CDS HH1265 NC_004917.1 1225207 1225971 D hypothetical protein 1225207..1225971 Helicobacter hepaticus ATCC 51449 1492953 NP_860797.1 CDS HH1266 NC_004917.1 1226034 1226378 D hypothetical protein 1226034..1226378 Helicobacter hepaticus ATCC 51449 1492954 NP_860798.1 CDS HH1267 NC_004917.1 1226460 1227650 D similar to Campylobacter jejuni CJ1687; predicted efflux protein; hypothetical protein 1226460..1227650 Helicobacter hepaticus ATCC 51449 1492955 NP_860799.1 CDS dld NC_004917.1 1227662 1230562 R similar to Helicobacter pylori HP1222; predicted D-lactate dehydrogenase Dld; hypothetical protein complement(1227662..1230562) Helicobacter hepaticus ATCC 51449 1492956 NP_860800.1 CDS HH1269 NC_004917.1 1230614 1231030 R similar to Campylobacter jejuni CJ0950c; predicted secreted protein; hypothetical protein complement(1230614..1231030) Helicobacter hepaticus ATCC 51449 1492957 NP_860801.1 CDS dnaE NC_004917.1 1231084 1234740 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(1231084..1234740) Helicobacter hepaticus ATCC 51449 1492958 NP_860802.1 CDS HH1271 NC_004917.1 1234897 1236300 D predicted secreted protein; hypothetical protein 1234897..1236300 Helicobacter hepaticus ATCC 51449 1492959 NP_860803.1 CDS nusA NC_004917.1 1236297 1237424 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(1236297..1237424) Helicobacter hepaticus ATCC 51449 1492960 NP_860804.1 CDS HH1273 NC_004917.1 1237600 1237860 D similar to Campylobacter jejuni CJ0459c; hypothetical protein 1237600..1237860 Helicobacter hepaticus ATCC 51449 1492961 NP_860805.1 CDS HH1274 NC_004917.1 1237945 1239276 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1237945..1239276 Helicobacter hepaticus ATCC 51449 1492962 NP_860806.1 CDS HH1275 NC_004917.1 1239270 1239914 D similar to Helicobacter pylori HP0270; hypothetical protein 1239270..1239914 Helicobacter hepaticus ATCC 51449 1492963 NP_860807.1 CDS HH1276 NC_004917.1 1239977 1241017 D hypothetical protein 1239977..1241017 Helicobacter hepaticus ATCC 51449 1492964 NP_860808.1 CDS HH1277 NC_004917.1 1241021 1241569 D similar to Helicobacter pylori HP0272; predicted secreted protein; hypothetical protein 1241021..1241569 Helicobacter hepaticus ATCC 51449 1492965 NP_860809.1 CDS HH1278 NC_004917.1 1241562 1242143 D predicted membrane-associated; hypothetical protein 1241562..1242143 Helicobacter hepaticus ATCC 51449 1492966 NP_860810.1 CDS mraW NC_004917.1 1242153 1243106 D similar to Helicobacter pylori HP0707; S-adenosyl-methyltransferase MraW 1242153..1243106 Helicobacter hepaticus ATCC 51449 1492967 NP_860811.1 CDS HH1280 NC_004917.1 1243107 1243475 D similar to Campylobacter jejuni CJ0692c; predicted membrane-associated; hypothetical protein 1243107..1243475 Helicobacter hepaticus ATCC 51449 1492968 NP_860812.1 CDS HH1281 NC_004917.1 1243550 1243648 D hypothetical protein 1243550..1243648 Helicobacter hepaticus ATCC 51449 1492969 NP_860813.2 CDS fabD NC_004917.1 1243745 1244680 D ACP S-malonyltransferase 1243745..1244680 Helicobacter hepaticus ATCC 51449 1492970 NP_860814.1 CDS HH1283 NC_004917.1 1244695 1245393 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1244695..1245393 Helicobacter hepaticus ATCC 51449 1492971 NP_860815.1 CDS HH1284 NC_004917.1 1245405 1245923 D similar to Campylobacter jejuni CJ1002c; hypothetical protein 1245405..1245923 Helicobacter hepaticus ATCC 51449 1492972 NP_860816.1 CDS HH1285 NC_004917.1 1245933 1246403 D similar to Neisseria meningitidis pilin PilE; hypothetical protein 1245933..1246403 Helicobacter hepaticus ATCC 51449 1492973 NP_860817.1 CDS HH1286 NC_004917.1 1246804 1247655 R similar to Campylobacter jejuni CJ1467; hypothetical protein complement(1246804..1247655) Helicobacter hepaticus ATCC 51449 1492974 NP_860818.1 CDS HH1287 NC_004917.1 1247726 1249081 D similar to Helicobacter pylori HP1489; predicted secreted protein; hypothetical protein 1247726..1249081 Helicobacter hepaticus ATCC 51449 1492975 NP_860819.1 CDS HH1288 NC_004917.1 1249103 1250077 D similar to Helicobacter pylori HP1488; predicted secreted protein; hypothetical protein 1249103..1250077 Helicobacter hepaticus ATCC 51449 1492976 NP_860820.1 CDS rpmB NC_004917.1 1250147 1250335 D required for 70S ribosome assembly; 50S ribosomal protein L28 1250147..1250335 Helicobacter hepaticus ATCC 51449 1492977 NP_860821.1 CDS HH1290 NC_004917.1 1250353 1251480 D similar to Helicobacter pylori HP0490; predicted potassium channel; hypothetical protein 1250353..1251480 Helicobacter hepaticus ATCC 51449 1492978 NP_860822.1 CDS argJ NC_004917.1 1251473 1252687 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1251473..1252687 Helicobacter hepaticus ATCC 51449 1492979 NP_860823.1 CDS HH1292 NC_004917.1 1252803 1253024 D hypothetical protein 1252803..1253024 Helicobacter hepaticus ATCC 51449 1492980 NP_860824.1 CDS HH1293 NC_004917.1 1253203 1253328 D hypothetical protein 1253203..1253328 Helicobacter hepaticus ATCC 51449 1492981 NP_860825.1 CDS HH1294 NC_004917.1 1253514 1254881 R fibronectin/fibrinogen-binding protein complement(1253514..1254881) Helicobacter hepaticus ATCC 51449 1492982 NP_860826.1 CDS recN NC_004917.1 1254904 1256445 R DNA repair protein RecN complement(1254904..1256445) Helicobacter hepaticus ATCC 51449 1492983 NP_860827.1 CDS HH1296 NC_004917.1 1256460 1257365 R possible kinase; hypothetical protein complement(1256460..1257365) Helicobacter hepaticus ATCC 51449 1492984 NP_860828.1 CDS HH1297 NC_004917.1 1257374 1257982 R predicted secreted protein; hypothetical protein complement(1257374..1257982) Helicobacter hepaticus ATCC 51449 1492985 NP_860829.1 CDS HH1298 NC_004917.1 1258222 1259448 D similar to Campylobacter jejuni integral membrane protein; inner membrane protein 1258222..1259448 Helicobacter hepaticus ATCC 51449 1492986 NP_860830.1 CDS HH1299 NC_004917.1 1259460 1259699 D similar to Campylobacter jejuni CJ1501; hypothetical protein 1259460..1259699 Helicobacter hepaticus ATCC 51449 1492987 NP_860831.1 CDS HH1300 NC_004917.1 1259771 1259893 D hypothetical protein 1259771..1259893 Helicobacter hepaticus ATCC 51449 1492988 NP_860832.1 CDS HH1301 NC_004917.1 1259972 1260490 D hypothetical protein 1259972..1260490 Helicobacter hepaticus ATCC 51449 1492989 NP_860833.1 CDS HH1302 NC_004917.1 1260715 1261971 D hypothetical protein 1260715..1261971 Helicobacter hepaticus ATCC 51449 1492990 NP_860834.1 CDS HH1303 NC_004917.1 1262036 1262218 D hypothetical protein 1262036..1262218 Helicobacter hepaticus ATCC 51449 1492991 NP_860835.1 CDS HH1304 NC_004917.1 1262296 1262907 D similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1262296..1262907 Helicobacter hepaticus ATCC 51449 1492992 NP_860836.1 CDS HH1305 NC_004917.1 1262964 1264160 R predicted secreted protein; hypothetical protein complement(1262964..1264160) Helicobacter hepaticus ATCC 51449 1492993 NP_860837.1 CDS HH1306 NC_004917.1 1264183 1265091 R similar to Helicobacter pylori HP1336; hypothetical protein complement(1264183..1265091) Helicobacter hepaticus ATCC 51449 1492994 NP_860838.1 CDS HH1307 NC_004917.1 1265215 1265691 R similar to Archaeoglobus fulgidus AF2335; hypothetical protein complement(1265215..1265691) Helicobacter hepaticus ATCC 51449 1492995 NP_860839.1 CDS ackA NC_004917.1 1265773 1266978 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(1265773..1266978) Helicobacter hepaticus ATCC 51449 1492996 NP_860840.1 CDS pta NC_004917.1 1266998 1267993 R phosphotransacetylase complement(1266998..1267993) Helicobacter hepaticus ATCC 51449 1492997 NP_860841.1 CDS HH1310 NC_004917.1 1268185 1270191 R methyl-accepting chemotaxis protein complement(1268185..1270191) Helicobacter hepaticus ATCC 51449 1492998 NP_860842.1 CDS HH1311 NC_004917.1 1270285 1271631 R similar to Campylobacter jejuni CJ1454c; hypothetical protein complement(1270285..1271631) Helicobacter hepaticus ATCC 51449 1492999 NP_860843.1 CDS HH1312 NC_004917.1 1271792 1272385 D predicted secreted protein; hypothetical protein 1271792..1272385 Helicobacter hepaticus ATCC 51449 1493000 NP_860844.1 CDS HH1313 NC_004917.1 1272382 1273212 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase complement(1272382..1273212) Helicobacter hepaticus ATCC 51449 1493001 NP_860845.1 CDS HH1314 NC_004917.1 1273345 1273731 D predicted secreted protein; hypothetical protein 1273345..1273731 Helicobacter hepaticus ATCC 51449 1493002 NP_860846.1 CDS tpiA NC_004917.1 1273743 1274450 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(1273743..1274450) Helicobacter hepaticus ATCC 51449 1493003 NP_860847.1 CDS yhjA NC_004917.1 1274627 1275688 D cytochrome c551 peroxidase 1274627..1275688 Helicobacter hepaticus ATCC 51449 1493004 NP_860848.1 CDS polA NC_004917.1 1275810 1278548 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 1275810..1278548 Helicobacter hepaticus ATCC 51449 1493005 NP_860849.1 CDS HH1318 NC_004917.1 1278675 1278980 D hypothetical protein 1278675..1278980 Helicobacter hepaticus ATCC 51449 1493006 NP_860850.1 CDS HH1319 NC_004917.1 1279260 1280435 R similar to Helicobacter pylori HP1487; predicted membrane-associated; hypothetical protein complement(1279260..1280435) Helicobacter hepaticus ATCC 51449 1493007 NP_860851.1 CDS flhB_2 NC_004917.1 1280432 1280710 R similar to Helicobacter pylori HP1575 (FlhB2); flagellar basal body protein FlhB complement(1280432..1280710) Helicobacter hepaticus ATCC 51449 1493008 NP_860852.1 CDS ribC NC_004917.1 1280719 1281357 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(1280719..1281357) Helicobacter hepaticus ATCC 51449 1493009 NP_860853.1 CDS HH1322 NC_004917.1 1281447 1282244 D hypothetical protein 1281447..1282244 Helicobacter hepaticus ATCC 51449 1493010 NP_860854.1 CDS dniR NC_004917.1 1282265 1283389 D similar to Helicobacter pylori HP1572; possibly regulatory protein DniR; hypothetical protein 1282265..1283389 Helicobacter hepaticus ATCC 51449 1493011 NP_860855.1 CDS rlpA NC_004917.1 1283404 1284300 D rare lipoprotein A 1283404..1284300 Helicobacter hepaticus ATCC 51449 1493012 NP_860856.1 CDS hisB NC_004917.1 1284326 1284937 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1284326..1284937 Helicobacter hepaticus ATCC 51449 1493013 NP_860857.1 CDS HH1326 NC_004917.1 1284934 1285428 D similar to Helicobacter pylori HP1570; hypothetical protein 1284934..1285428 Helicobacter hepaticus ATCC 51449 1493014 NP_860858.1 CDS HH1327 NC_004917.1 1285394 1285942 D predicted secreted protein; hypothetical protein 1285394..1285942 Helicobacter hepaticus ATCC 51449 1493015 NP_860859.1 CDS HH1328 NC_004917.1 1285942 1286412 D similar to Helicobacter pylori HP1568; predicted membrane-associated; hypothetical protein 1285942..1286412 Helicobacter hepaticus ATCC 51449 1493016 NP_860860.1 CDS engB NC_004917.1 1286457 1287125 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1286457..1287125 Helicobacter hepaticus ATCC 51449 1493017 NP_860861.1 CDS HH1330 NC_004917.1 1287115 1287585 D catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase 1287115..1287585 Helicobacter hepaticus ATCC 51449 1493018 NP_860862.1 CDS HH1331 NC_004917.1 1287549 1288001 D predicted membrane-associated; hypothetical protein 1287549..1288001 Helicobacter hepaticus ATCC 51449 1493019 NP_860863.1 CDS HH1332 NC_004917.1 1287998 1289785 D penicillin-binding protein 1287998..1289785 Helicobacter hepaticus ATCC 51449 1493020 NP_860864.1 CDS flmA NC_004917.1 1289800 1290798 D flagellar glycosylation protein FlmA 1289800..1290798 Helicobacter hepaticus ATCC 51449 1493021 NP_860865.1 CDS HH1334 NC_004917.1 1290872 1291366 D ferritin 1290872..1291366 Helicobacter hepaticus ATCC 51449 1493022 NP_860866.1 CDS dfp NC_004917.1 1291455 1292696 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1291455..1292696 Helicobacter hepaticus ATCC 51449 1493023 NP_860867.1 CDS HH1336 NC_004917.1 1292693 1293424 D similar to Helicobacter pylori HP0842; hypothetical protein 1292693..1293424 Helicobacter hepaticus ATCC 51449 1493024 NP_860868.1 CDS HH1337 NC_004917.1 1293458 1295563 R similar to Campylobacter jejuni MCP-type signal transduction protein CJ1506c; hypothetical protein complement(1293458..1295563) Helicobacter hepaticus ATCC 51449 1493025 NP_860869.1 CDS HH1338 NC_004917.1 1295666 1296043 R similar to Campylobacter jejuni CJ0977; hypothetical protein complement(1295666..1296043) Helicobacter hepaticus ATCC 51449 1493026 NP_860870.1 CDS HH1339 NC_004917.1 1296081 1296179 D hypothetical protein 1296081..1296179 Helicobacter hepaticus ATCC 51449 1493027 NP_860871.1 CDS HH1340 NC_004917.1 1296137 1297084 R similar to Campylobacter jejuni CJ0976; predicted methyltransferase; hypothetical protein complement(1296137..1297084) Helicobacter hepaticus ATCC 51449 1493028 NP_860872.1 CDS HH1341 NC_004917.1 1297062 1298105 R similar to Helicobacter pylori HP0418; hypothetical protein complement(1297062..1298105) Helicobacter hepaticus ATCC 51449 1493029 NP_860873.1 CDS metG NC_004917.1 1298124 1300055 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1298124..1300055) Helicobacter hepaticus ATCC 51449 1493030 NP_860874.1 CDS HH1343 NC_004917.1 1300075 1300275 R similar to Helicobacter pylori HP1384; hypothetical protein complement(1300075..1300275) Helicobacter hepaticus ATCC 51449 1493031 NP_860875.1 CDS fbp NC_004917.1 1300268 1301107 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(1300268..1301107) Helicobacter hepaticus ATCC 51449 1493032 NP_860876.1 CDS HH1345 NC_004917.1 1301155 1301850 R hypothetical protein complement(1301155..1301850) Helicobacter hepaticus ATCC 51449 1493033 NP_860877.1 CDS rpe NC_004917.1 1301932 1302582 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 1301932..1302582 Helicobacter hepaticus ATCC 51449 1493034 NP_860878.1 CDS dnaQ NC_004917.1 1302588 1303388 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1302588..1303388 Helicobacter hepaticus ATCC 51449 1493035 NP_860879.1 CDS hemK NC_004917.1 1303366 1304205 R DNA methylase HemK complement(1303366..1304205) Helicobacter hepaticus ATCC 51449 1493036 NP_860880.1 CDS HH1349 NC_004917.1 1304195 1305421 R zinc-metallo protease complement(1304195..1305421) Helicobacter hepaticus ATCC 51449 1493037 NP_860881.1 CDS pyrG NC_004917.1 1305554 1307176 D CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1305554..1307176 Helicobacter hepaticus ATCC 51449 1493038 NP_860882.1 CDS recJ NC_004917.1 1307193 1308761 D single-stranded DNA-specific exonuclease 1307193..1308761 Helicobacter hepaticus ATCC 51449 1493039 NP_860883.1 CDS HH1352 NC_004917.1 1308775 1309554 R similar to Campylobacter jejuni CJ1056c; hypothetical protein complement(1308775..1309554) Helicobacter hepaticus ATCC 51449 1493040 NP_860884.1 CDS purB NC_004917.1 1309759 1311090 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1309759..1311090 Helicobacter hepaticus ATCC 51449 1493041 NP_860885.1 CDS HH1354 NC_004917.1 1311068 1311646 R similar to Helicobacter pylori conserved hypothetical mitochondrial protein 4; hypothetical protein complement(1311068..1311646) Helicobacter hepaticus ATCC 51449 1493042 NP_860886.1 CDS pyrE NC_004917.1 1311652 1312266 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(1311652..1312266) Helicobacter hepaticus ATCC 51449 1493043 NP_860887.1 CDS HH1356 NC_004917.1 1312281 1312961 R hypothetical protein complement(1312281..1312961) Helicobacter hepaticus ATCC 51449 1493044 NP_860888.1 CDS HH1357 NC_004917.1 1313105 1313611 D similar to Helicobacter pylori HP1028; predicted secreted protein; hypothetical protein 1313105..1313611 Helicobacter hepaticus ATCC 51449 1493045 NP_860889.1 CDS HH1358 NC_004917.1 1313613 1315727 D DNA helicase II 1313613..1315727 Helicobacter hepaticus ATCC 51449 1493046 NP_860890.1 CDS flgA NC_004917.1 1315724 1316641 D required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1315724..1316641 Helicobacter hepaticus ATCC 51449 1493047 NP_860891.1 CDS ubiD NC_004917.1 1316695 1317288 D catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1316695..1317288 Helicobacter hepaticus ATCC 51449 1493048 NP_860892.1 CDS coaD NC_004917.1 1317288 1317785 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1317288..1317785 Helicobacter hepaticus ATCC 51449 1493049 NP_860893.1 CDS tmk NC_004917.1 1317785 1318372 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1317785..1318372 Helicobacter hepaticus ATCC 51449 1493050 NP_860894.1 CDS HH1363 NC_004917.1 1318376 1318987 D hypothetical protein 1318376..1318987 Helicobacter hepaticus ATCC 51449 1493051 NP_860895.1 CDS flaA_1 NC_004917.1 1319075 1320601 D FlaA; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin A 1319075..1320601 Helicobacter hepaticus ATCC 51449 1493052 NP_860896.1 CDS HH1365 NC_004917.1 1320660 1320986 R predicted secreted protein; hypothetical protein complement(1320660..1320986) Helicobacter hepaticus ATCC 51449 1493053 NP_860897.1 CDS folD NC_004917.1 1321061 1321921 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1321061..1321921 Helicobacter hepaticus ATCC 51449 1493054 NP_860898.1 CDS lepB NC_004917.1 1321918 1322931 D signal peptidase I 1321918..1322931 Helicobacter hepaticus ATCC 51449 1493055 NP_860899.1 CDS rpiB NC_004917.1 1322943 1323386 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 1322943..1323386 Helicobacter hepaticus ATCC 51449 1493056 NP_860900.1 CDS HH1369 NC_004917.1 1323402 1323755 D similar to Campylobacter jejuni membrane protein; hypothetical protein 1323402..1323755 Helicobacter hepaticus ATCC 51449 1493057 NP_860901.1 CDS apt NC_004917.1 1323783 1324319 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1323783..1324319 Helicobacter hepaticus ATCC 51449 1493058 NP_860902.1 CDS HH1371 NC_004917.1 1324319 1325080 D similar to Helicobacter pylori HP0571; predicted membrane-associated; hypothetical protein 1324319..1325080 Helicobacter hepaticus ATCC 51449 1493059 NP_860903.1 CDS pepA NC_004917.1 1325120 1326544 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1325120..1326544 Helicobacter hepaticus ATCC 51449 1493060 NP_860904.1 CDS HH1373 NC_004917.1 1326545 1327645 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1326545..1327645 Helicobacter hepaticus ATCC 51449 1493061 NP_860905.1 CDS HH1374 NC_004917.1 1327841 1328068 R hypothetical protein complement(1327841..1328068) Helicobacter hepaticus ATCC 51449 1493062 NP_860906.1 CDS HH1375 NC_004917.1 1328065 1328511 R hypothetical protein complement(1328065..1328511) Helicobacter hepaticus ATCC 51449 1493063 NP_860907.1 CDS HH1376 NC_004917.1 1328508 1329365 R hypothetical protein complement(1328508..1329365) Helicobacter hepaticus ATCC 51449 1493064 NP_860908.1 CDS rpsJ NC_004917.1 1329706 1330017 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1329706..1330017 Helicobacter hepaticus ATCC 51449 1493065 NP_860909.2 CDS rplC NC_004917.1 1330073 1330651 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1330073..1330651 Helicobacter hepaticus ATCC 51449 1493066 NP_860910.1 CDS rplD NC_004917.1 1330663 1331286 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1330663..1331286 Helicobacter hepaticus ATCC 51449 1493067 NP_860911.1 CDS rplW NC_004917.1 1331287 1331568 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1331287..1331568 Helicobacter hepaticus ATCC 51449 1493068 NP_860912.1 CDS rplB NC_004917.1 1331578 1332405 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1331578..1332405 Helicobacter hepaticus ATCC 51449 1493069 NP_860913.1 CDS rpsS NC_004917.1 1332416 1332697 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1332416..1332697 Helicobacter hepaticus ATCC 51449 1493070 NP_860914.1 CDS rplV NC_004917.1 1332707 1333279 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1332707..1333279 Helicobacter hepaticus ATCC 51449 1493071 NP_860915.1 CDS rpsC NC_004917.1 1333282 1333992 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1333282..1333992 Helicobacter hepaticus ATCC 51449 1493072 NP_860916.1 CDS rplP NC_004917.1 1333996 1334421 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1333996..1334421 Helicobacter hepaticus ATCC 51449 1493073 NP_860917.1 CDS rpmC NC_004917.1 1334408 1334596 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1334408..1334596 Helicobacter hepaticus ATCC 51449 1493074 NP_860918.1 CDS rpsQ NC_004917.1 1334600 1334866 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1334600..1334866 Helicobacter hepaticus ATCC 51449 1493075 NP_860919.1 CDS rplN NC_004917.1 1334863 1335231 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1334863..1335231 Helicobacter hepaticus ATCC 51449 1493076 NP_860920.1 CDS rplX NC_004917.1 1335231 1335467 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1335231..1335467 Helicobacter hepaticus ATCC 51449 1493077 NP_860921.1 CDS rplE NC_004917.1 1335467 1336012 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1335467..1336012 Helicobacter hepaticus ATCC 51449 1493078 YP_003856774.1 CDS HH_1900 NC_004917.1 1336014 1336199 D 30S ribosomal protein S14 1336014..1336199 Helicobacter hepaticus ATCC 51449 9711808 NP_860922.1 CDS HH1391 NC_004917.1 1336033 1336146 D similar to Helicobacter pylori JHP1226; hypothetical protein 1336033..1336146 Helicobacter hepaticus ATCC 51449 1493079 NP_860923.1 CDS rpsH NC_004917.1 1336209 1336604 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1336209..1336604 Helicobacter hepaticus ATCC 51449 1493080 NP_860924.1 CDS rplF NC_004917.1 1336614 1337150 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1336614..1337150 Helicobacter hepaticus ATCC 51449 1493081 NP_860925.1 CDS rplR NC_004917.1 1337166 1337522 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1337166..1337522 Helicobacter hepaticus ATCC 51449 1493082 NP_860926.1 CDS rpsE NC_004917.1 1337532 1337972 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1337532..1337972 Helicobacter hepaticus ATCC 51449 1493083 NP_860927.1 CDS rplO NC_004917.1 1337983 1338384 D late assembly protein; 50S ribosomal protein L15 1337983..1338384 Helicobacter hepaticus ATCC 51449 1493084 NP_860928.1 CDS secY NC_004917.1 1338381 1339631 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1338381..1339631 Helicobacter hepaticus ATCC 51449 1493085 NP_860929.1 CDS map NC_004917.1 1339633 1340391 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1339633..1340391 Helicobacter hepaticus ATCC 51449 1493086 NP_860930.1 CDS infA NC_004917.1 1340394 1340612 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1340394..1340612 Helicobacter hepaticus ATCC 51449 1493087 NP_860931.1 CDS rpsM NC_004917.1 1340816 1341178 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1340816..1341178 Helicobacter hepaticus ATCC 51449 1493088 NP_860932.1 CDS rpsK NC_004917.1 1341188 1341580 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1341188..1341580 Helicobacter hepaticus ATCC 51449 1493089 NP_860933.1 CDS rpsD NC_004917.1 1341591 1342217 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1341591..1342217 Helicobacter hepaticus ATCC 51449 1493090 NP_860934.1 CDS rpoA NC_004917.1 1342245 1343249 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1342245..1343249 Helicobacter hepaticus ATCC 51449 1493091 NP_860935.1 CDS rplQ NC_004917.1 1343264 1343614 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1343264..1343614 Helicobacter hepaticus ATCC 51449 1493092 NP_860936.1 CDS HH1405 NC_004917.1 1344048 1345619 D hypothetical protein 1344048..1345619 Helicobacter hepaticus ATCC 51449 1493093 NP_860937.1 CDS HH1406 NC_004917.1 1345664 1346785 D predicted secreted protein; hypothetical protein 1345664..1346785 Helicobacter hepaticus ATCC 51449 1493094 NP_860938.1 CDS flgB NC_004917.1 1346855 1347289 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal-body rod protein FlgB 1346855..1347289 Helicobacter hepaticus ATCC 51449 1493095 NP_860939.1 CDS flgC NC_004917.1 1347308 1347799 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1347308..1347799 Helicobacter hepaticus ATCC 51449 1493096 NP_860940.1 CDS fliE NC_004917.1 1347809 1348120 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1347809..1348120 Helicobacter hepaticus ATCC 51449 1493097 NP_860941.1 CDS HH1410 NC_004917.1 1348129 1349922 D probable penicillin-binding protein; hypothetical protein 1348129..1349922 Helicobacter hepaticus ATCC 51449 1493098 NP_860942.1 CDS HH1411 NC_004917.1 1349931 1350071 D hypothetical protein 1349931..1350071 Helicobacter hepaticus ATCC 51449 1493099 NP_860943.1 CDS HH1412 NC_004917.1 1350151 1350705 D similar to Helicobacter pylori JHP0216; hypothetical protein 1350151..1350705 Helicobacter hepaticus ATCC 51449 1493100 NP_860944.1 CDS HH1413 NC_004917.1 1350702 1353566 R predicted membrane-associated; hypothetical protein complement(1350702..1353566) Helicobacter hepaticus ATCC 51449 1493101 NP_860945.1 CDS trpA NC_004917.1 1353570 1354373 R alpha chain; tryptophan synthase complement(1353570..1354373) Helicobacter hepaticus ATCC 51449 1493102 NP_860946.1 CDS trpB NC_004917.1 1354518 1355780 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1354518..1355780 Helicobacter hepaticus ATCC 51449 1493103 NP_860947.1 CDS HH1416 NC_004917.1 1355794 1356162 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; a fusion protein of this enzyme with MsrA and thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase B complement(1355794..1356162) Helicobacter hepaticus ATCC 51449 1493104 NP_860948.1 CDS HH1417 NC_004917.1 1356164 1357156 R predicted secreted protein; hypothetical protein complement(1356164..1357156) Helicobacter hepaticus ATCC 51449 1493105 NP_860949.1 CDS HH1418 NC_004917.1 1357286 1360006 D hypothetical protein 1357286..1360006 Helicobacter hepaticus ATCC 51449 1493106 NP_860950.1 CDS HH1419 NC_004917.1 1360016 1360957 D hypothetical protein 1360016..1360957 Helicobacter hepaticus ATCC 51449 1493107 NP_860951.1 CDS HH1420 NC_004917.1 1360957 1363026 D hypothetical protein 1360957..1363026 Helicobacter hepaticus ATCC 51449 1493108 NP_860952.1 CDS HH1421 NC_004917.1 1363026 1364294 D hypothetical protein 1363026..1364294 Helicobacter hepaticus ATCC 51449 1493109 NP_860953.1 CDS HH1422 NC_004917.1 1364426 1365442 D similar to Neisseria meningitidis NMA1635; hypothetical protein 1364426..1365442 Helicobacter hepaticus ATCC 51449 1493110 NP_860954.1 CDS HH1423 NC_004917.1 1365552 1366979 D methyltransferase subunit; type I restriction-modification system 1365552..1366979 Helicobacter hepaticus ATCC 51449 1493111 NP_860955.1 CDS HH1424 NC_004917.1 1367061 1368368 D possible arsenical pump membrane protein; hypothetical protein 1367061..1368368 Helicobacter hepaticus ATCC 51449 1493112 NP_860956.1 CDS HH1425 NC_004917.1 1368440 1370017 D hypothetical protein 1368440..1370017 Helicobacter hepaticus ATCC 51449 1493113 NP_860957.1 CDS HH1426 NC_004917.1 1370098 1370940 D similar to Campylobacter jejuni CJ1420c; hypothetical protein 1370098..1370940 Helicobacter hepaticus ATCC 51449 1493114 NP_860958.1 CDS HH1427 NC_004917.1 1370990 1371775 D possible methyltransferase; hypothetical protein 1370990..1371775 Helicobacter hepaticus ATCC 51449 1493115 NP_860959.1 CDS HH1428 NC_004917.1 1371816 1373408 D hypothetical protein 1371816..1373408 Helicobacter hepaticus ATCC 51449 1493116 NP_860960.1 CDS HH1429 NC_004917.1 1373504 1374199 D hypothetical protein 1373504..1374199 Helicobacter hepaticus ATCC 51449 1493117 NP_860961.1 CDS HH1430 NC_004917.1 1374211 1374552 D hypothetical protein 1374211..1374552 Helicobacter hepaticus ATCC 51449 1493118 NP_860962.1 CDS HH1431 NC_004917.1 1374657 1374989 D hypothetical protein 1374657..1374989 Helicobacter hepaticus ATCC 51449 1493119 NP_860963.1 CDS HH1432 NC_004917.1 1375002 1375514 D predicted secreted protein; hypothetical protein 1375002..1375514 Helicobacter hepaticus ATCC 51449 1493120 NP_860964.1 CDS HH1433 NC_004917.1 1375515 1375691 D hypothetical protein 1375515..1375691 Helicobacter hepaticus ATCC 51449 1493121 NP_860965.1 CDS HH1434 NC_004917.1 1376248 1379742 D type I restriction/modification enzyme 1376248..1379742 Helicobacter hepaticus ATCC 51449 1493122 NP_860966.1 CDS HH1435 NC_004917.1 1379811 1380461 D possible restriction/modification enzyme; hypothetical protein 1379811..1380461 Helicobacter hepaticus ATCC 51449 1493123 NP_860967.1 CDS HH1436 NC_004917.1 1380629 1382962 D similar to Campylobacter jejuni CJ1418c; hypothetical protein 1380629..1382962 Helicobacter hepaticus ATCC 51449 1493124 NP_860968.1 CDS HH1437 NC_004917.1 1382959 1383591 D similar to Campylobacter jejuni CJ1417c; hypothetical protein 1382959..1383591 Helicobacter hepaticus ATCC 51449 1493125 NP_860969.1 CDS cysC NC_004917.1 1383594 1384199 D converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 1383594..1384199 Helicobacter hepaticus ATCC 51449 1493126 NP_860970.1 CDS HH1439 NC_004917.1 1384199 1384957 D possible sugar nucleotidyltransferase; hypothetical protein 1384199..1384957 Helicobacter hepaticus ATCC 51449 1493127 NP_860971.1 CDS cysQ NC_004917.1 1385005 1385805 D probable CysQ protein homolog; hypothetical protein 1385005..1385805 Helicobacter hepaticus ATCC 51449 1493128 NP_860972.1 CDS HH1441 NC_004917.1 1386017 1386409 R similar to Campylobacter jejuni CJ1137c; hypothetical protein complement(1386017..1386409) Helicobacter hepaticus ATCC 51449 1493129 NP_860973.1 CDS HH1442 NC_004917.1 1386465 1387922 R similar to Campylobacter jejuni CJ0140; hypothetical protein complement(1386465..1387922) Helicobacter hepaticus ATCC 51449 1493130 NP_860974.1 CDS HH1443 NC_004917.1 1387897 1389909 R endonuclease complement(1387897..1389909) Helicobacter hepaticus ATCC 51449 1493131 NP_860975.1 CDS guaA NC_004917.1 1390108 1394235 D guanosine monophosphate synthetase GuaA 1390108..1394235 Helicobacter hepaticus ATCC 51449 1493132 NP_860976.1 CDS HH1445 NC_004917.1 1394487 1394813 D similar to Helicobacter pylori type II DNA modification enzyme JHP0045; hypothetical protein 1394487..1394813 Helicobacter hepaticus ATCC 51449 1493133 NP_860977.1 CDS cdtA NC_004917.1 1395180 1395875 D cytolethal distending toxin CdtA 1395180..1395875 Helicobacter hepaticus ATCC 51449 1493134 NP_860978.1 CDS cdtB NC_004917.1 1395895 1396716 D cytolethal distending toxin CdtB 1395895..1396716 Helicobacter hepaticus ATCC 51449 1493135 NP_860979.1 CDS cdtC NC_004917.1 1396726 1397277 D cytolethal distending toxin CdtC 1396726..1397277 Helicobacter hepaticus ATCC 51449 1493136 NP_860980.1 CDS HH1449 NC_004917.1 1397252 1397521 D hypothetical protein 1397252..1397521 Helicobacter hepaticus ATCC 51449 1493137 NP_860981.1 CDS HH1450 NC_004917.1 1397568 1398116 D hypothetical protein 1397568..1398116 Helicobacter hepaticus ATCC 51449 1493138 NP_860982.1 CDS HH1451 NC_004917.1 1398440 1398871 D possible cation efflux pump; hypothetical protein 1398440..1398871 Helicobacter hepaticus ATCC 51449 1493139 NP_860983.1 CDS HH1452 NC_004917.1 1398868 1399182 D possible cation efflux pump; hypothetical protein 1398868..1399182 Helicobacter hepaticus ATCC 51449 1493140 NP_860984.1 CDS HH1453 NC_004917.1 1399278 1399382 D hypothetical protein 1399278..1399382 Helicobacter hepaticus ATCC 51449 1493141 NP_860985.1 CDS HH1454 NC_004917.1 1399379 1400545 D similar to Listeria monocytogenes antibiotic resistance protein LMO0872; hypothetical protein 1399379..1400545 Helicobacter hepaticus ATCC 51449 1493142 NP_860986.1 CDS HH1455 NC_004917.1 1400613 1401536 R predicted membrane-associated; hypothetical protein complement(1400613..1401536) Helicobacter hepaticus ATCC 51449 1493143 NP_860987.1 CDS HH1456 NC_004917.1 1401533 1402252 R predicted membrane-associated; hypothetical protein complement(1401533..1402252) Helicobacter hepaticus ATCC 51449 1493144 NP_860988.1 CDS HH1457 NC_004917.1 1402252 1402944 R predicted membrane-associated; hypothetical protein complement(1402252..1402944) Helicobacter hepaticus ATCC 51449 1493145 NP_860989.1 CDS HH1458 NC_004917.1 1402947 1403522 R predicted membrane-associated; hypothetical protein complement(1402947..1403522) Helicobacter hepaticus ATCC 51449 1493146 NP_860990.1 CDS HH1459 NC_004917.1 1403590 1403754 D hypothetical protein 1403590..1403754 Helicobacter hepaticus ATCC 51449 1493147 NP_860991.1 CDS HH1460 NC_004917.1 1403772 1404287 D similar to yersinia pestis YP1998; predicted secreted protein; hypothetical protein 1403772..1404287 Helicobacter hepaticus ATCC 51449 1493148 NP_860992.1 CDS HH1461 NC_004917.1 1404325 1405242 D predicted secreted protein; hypothetical protein 1404325..1405242 Helicobacter hepaticus ATCC 51449 1493149 NP_860993.1 CDS HH1462 NC_004917.1 1405284 1406444 D aldo/keto reductase 1405284..1406444 Helicobacter hepaticus ATCC 51449 1493150 NP_860994.1 CDS HH1463 NC_004917.1 1406581 1407066 R similar to Bacillus halodurans BH0306; hypothetical protein complement(1406581..1407066) Helicobacter hepaticus ATCC 51449 1493151 NP_860995.1 CDS HH1464 NC_004917.1 1407211 1408713 D similar to Pseudomonas aeruginosa PA1316; predicted efflux transporter; hypothetical protein 1407211..1408713 Helicobacter hepaticus ATCC 51449 1493152 NP_860996.1 CDS HH1465 NC_004917.1 1408875 1409483 D hypothetical protein 1408875..1409483 Helicobacter hepaticus ATCC 51449 1493153 NP_860997.1 CDS HH1466 NC_004917.1 1409556 1409666 R hypothetical protein complement(1409556..1409666) Helicobacter hepaticus ATCC 51449 1492013 NP_860998.1 CDS HH1467 NC_004917.1 1409791 1410048 D predicted secreted protein; hypothetical protein 1409791..1410048 Helicobacter hepaticus ATCC 51449 1492014 NP_860999.1 CDS HH1468 NC_004917.1 1410045 1410554 D similar to Lactococcus lactis gamma-carboxymuconolactone decarboxylase; hypothetical protein 1410045..1410554 Helicobacter hepaticus ATCC 51449 1492015 NP_861000.1 CDS HH1469 NC_004917.1 1410599 1411216 D possible galactoside acyltransferase; hypothetical protein 1410599..1411216 Helicobacter hepaticus ATCC 51449 1492016 NP_861001.1 CDS HH1470 NC_004917.1 1411334 1413265 D predicted secreted protein; hypothetical protein 1411334..1413265 Helicobacter hepaticus ATCC 51449 1492017 NP_861002.1 CDS HH1471 NC_004917.1 1413597 1414475 D aldo/keto reductase 1413597..1414475 Helicobacter hepaticus ATCC 51449 1492018 NP_861003.1 CDS mdaB NC_004917.1 1414566 1415150 D modulator of drug activity MdaB 1414566..1415150 Helicobacter hepaticus ATCC 51449 1492019 NP_861004.1 CDS HH1473 NC_004917.1 1415203 1415952 D predicted secreted protein; hypothetical protein 1415203..1415952 Helicobacter hepaticus ATCC 51449 1492020 NP_861005.1 CDS HH1474 NC_004917.1 1415926 1416495 R similar to Bacteroides vulgaris nitroimidazole antibiotic resistance protein; hypothetical protein complement(1415926..1416495) Helicobacter hepaticus ATCC 51449 1492021 NP_861006.1 CDS HH1475 NC_004917.1 1416672 1417043 R predicted membrane-associated; hypothetical protein complement(1416672..1417043) Helicobacter hepaticus ATCC 51449 1492022 NP_861007.1 CDS HH1476 NC_004917.1 1416895 1417290 R similar to Campylobacter jejuni CJ1523c; hypothetical protein complement(1416895..1417290) Helicobacter hepaticus ATCC 51449 1492023 NP_861008.1 CDS HH1477 NC_004917.1 1417378 1417476 D hypothetical protein 1417378..1417476 Helicobacter hepaticus ATCC 51449 1492024 NP_861009.1 CDS HH1478 NC_004917.1 1417559 1418596 D similar to Escherichia coli HybA hydrogenase; hypothetical protein 1417559..1418596 Helicobacter hepaticus ATCC 51449 1492025 NP_861010.1 CDS HH1479 NC_004917.1 1418593 1419267 D similar to Vibrio cholerae VC1511; predicted hydrogenase cytochrome B component; hypothetical protein 1418593..1419267 Helicobacter hepaticus ATCC 51449 1492026 NP_861011.1 CDS glnQ_2 NC_004917.1 1419518 1420183 D ATP-binding protein; ABC-type amino-acid transporter 1419518..1420183 Helicobacter hepaticus ATCC 51449 1492027 NP_861012.1 CDS HH1481 NC_004917.1 1420203 1420985 D PEB1; bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein 1420203..1420985 Helicobacter hepaticus ATCC 51449 1492028 NP_861013.1 CDS HH1482 NC_004917.1 1420990 1421739 D ABC-type amino-acid transporter permease 1420990..1421739 Helicobacter hepaticus ATCC 51449 1492029 NP_861014.1 CDS gltK NC_004917.1 1421750 1422409 D ABC-type amino-acid transporter permease 1421750..1422409 Helicobacter hepaticus ATCC 51449 1492030 NP_861015.1 CDS HH1484 NC_004917.1 1422524 1422940 R similar to Campylobacter jejuni HP1065; hypothetical protein complement(1422524..1422940) Helicobacter hepaticus ATCC 51449 1492031 NP_861016.1 CDS HH1485 NC_004917.1 1422937 1423158 R predicted membrane-associated; hypothetical protein complement(1422937..1423158) Helicobacter hepaticus ATCC 51449 1492032 NP_861017.1 CDS gidB NC_004917.1 1423188 1423745 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(1423188..1423745) Helicobacter hepaticus ATCC 51449 1492033 NP_861018.1 CDS queA NC_004917.1 1423781 1424878 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(1423781..1424878) Helicobacter hepaticus ATCC 51449 1492034 NP_861019.1 CDS tatC NC_004917.1 1424875 1425672 R Sec-independent protein secretion pathway component TatC complement(1424875..1425672) Helicobacter hepaticus ATCC 51449 1492035 NP_861020.1 CDS HH1489 NC_004917.1 1425675 1426244 R mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase complement(1425675..1426244) Helicobacter hepaticus ATCC 51449 1492036 NP_861021.1 CDS serS NC_004917.1 1426404 1427672 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1426404..1427672 Helicobacter hepaticus ATCC 51449 1492037 NP_861022.1 CDS HH1491 NC_004917.1 1427685 1430168 D similar to Helicobacter pylori HP1479; predicted membrane-associated; hypothetical protein 1427685..1430168 Helicobacter hepaticus ATCC 51449 1492038 NP_861023.1 CDS HH1492 NC_004917.1 1430179 1430532 R hypothetical protein complement(1430179..1430532) Helicobacter hepaticus ATCC 51449 1492039 NP_861024.1 CDS gltA NC_004917.1 1430783 1432066 D type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1430783..1432066 Helicobacter hepaticus ATCC 51449 1492040 NP_861025.1 CDS rplY NC_004917.1 1432130 1432666 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1432130..1432666 Helicobacter hepaticus ATCC 51449 1492041 NP_861026.1 CDS pth NC_004917.1 1432666 1433337 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1432666..1433337 Helicobacter hepaticus ATCC 51449 1492042 NP_861027.1 CDS HH1496 NC_004917.1 1433340 1434419 D similar to Helicobacter pylori HP1498; predicted membrane-associated; hypothetical protein 1433340..1434419 Helicobacter hepaticus ATCC 51449 1492043 NP_861028.1 CDS atpB NC_004917.1 1434494 1435174 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 1434494..1435174 Helicobacter hepaticus ATCC 51449 1492044 NP_861029.1 CDS HH1498 NC_004917.1 1435161 1435760 D similar to Aquifex aeolicus thiamine phosphate synthase AQ1366; hypothetical protein 1435161..1435760 Helicobacter hepaticus ATCC 51449 1492045 NP_861030.1 CDS HH1499 NC_004917.1 1435729 1437816 R similar to Campylobacter jejuni integral membrane protein CJ1055c; hypothetical protein complement(1435729..1437816) Helicobacter hepaticus ATCC 51449 1492046 NP_861031.1 CDS HH1500 NC_004917.1 1437912 1438781 D predicted membrane-associated; hypothetical protein 1437912..1438781 Helicobacter hepaticus ATCC 51449 1492047 NP_861032.1 CDS HH1501 NC_004917.1 1438904 1439227 D similar to Helicobacter pylori HP0945; predicted secreted protein; hypothetical protein 1438904..1439227 Helicobacter hepaticus ATCC 51449 1492048 NP_861033.1 CDS HH1502 NC_004917.1 1439273 1440082 R similar to Bacillus halodurans BH0857; predicted secreted protein; hypothetical protein complement(1439273..1440082) Helicobacter hepaticus ATCC 51449 1492049 NP_861034.1 CDS HH1503 NC_004917.1 1440051 1441856 R similar to Campylobacter jejuni CJ0522; predicted membrane-associated; hypothetical protein complement(1440051..1441856) Helicobacter hepaticus ATCC 51449 1492050 NP_861035.1 CDS HH1504 NC_004917.1 1441879 1442784 R similar to Campylobacter jejuni CJ0937; predicted integral membrane protein; hypothetical protein complement(1441879..1442784) Helicobacter hepaticus ATCC 51449 1492051 NP_861036.1 CDS mpr NC_004917.1 1443006 1444109 D ATP/GTP-binding protein 1443006..1444109 Helicobacter hepaticus ATCC 51449 1492052 NP_861037.1 CDS HH1506 NC_004917.1 1444106 1445434 R predicted secreted protein; hypothetical protein complement(1444106..1445434) Helicobacter hepaticus ATCC 51449 1492053 NP_861038.1 CDS lysA NC_004917.1 1445971 1447245 D diaminopimelate decarboxylase 1445971..1447245 Helicobacter hepaticus ATCC 51449 1492054 NP_861039.1 CDS pheA NC_004917.1 1447265 1448362 D chorismate mutase 1447265..1448362 Helicobacter hepaticus ATCC 51449 1492055 NP_861040.1 CDS HH1509 NC_004917.1 1448391 1449278 D similar to Helicobacter pylori JHP0277; hypothetical protein 1448391..1449278 Helicobacter hepaticus ATCC 51449 1492056 NP_861041.1 CDS HH1510 NC_004917.1 1449353 1450087 D similar to Streptomyces globisporus lysozyme M1 precursor; hypothetical protein 1449353..1450087 Helicobacter hepaticus ATCC 51449 1492057 NP_861042.1 CDS HH1511 NC_004917.1 1450091 1451068 D hypothetical protein 1450091..1451068 Helicobacter hepaticus ATCC 51449 1492058 NP_861043.1 CDS HH1512 NC_004917.1 1451159 1452391 D hypothetical protein 1451159..1452391 Helicobacter hepaticus ATCC 51449 1492059 NP_861044.1 CDS HH1513 NC_004917.1 1452401 1453534 D similar to Mycobacterium tuberculosis Rv1679; predicted acyl-CoA dehydrogenase; hypothetical protein 1452401..1453534 Helicobacter hepaticus ATCC 51449 1492060 NP_861045.1 CDS HH1514 NC_004917.1 1453537 1454409 D similar to Mycobacterium tuberculosis Rv1680; hypothetical protein 1453537..1454409 Helicobacter hepaticus ATCC 51449 1492061 NP_861046.1 CDS truD NC_004917.1 1454406 1455563 R catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D complement(1454406..1455563) Helicobacter hepaticus ATCC 51449 1492062 NP_861047.1 CDS alr NC_004917.1 1455566 1456600 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(1455566..1456600) Helicobacter hepaticus ATCC 51449 1492063 NP_861048.1 CDS HH1517 NC_004917.1 1456645 1456950 R cytochrome c553 complement(1456645..1456950) Helicobacter hepaticus ATCC 51449 1492064 NP_861049.1 CDS recR NC_004917.1 1457046 1457633 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(1457046..1457633) Helicobacter hepaticus ATCC 51449 1492065 NP_861050.1 CDS dnaJ_2 NC_004917.1 1457748 1458905 D co-chaperone and heat shock protein DnaJ 1457748..1458905 Helicobacter hepaticus ATCC 51449 1492066 NP_861051.1 CDS HH1520 NC_004917.1 1458895 1459326 R hypothetical protein complement(1458895..1459326) Helicobacter hepaticus ATCC 51449 1492067 NP_861052.1 CDS HH1521 NC_004917.1 1459358 1459903 R hypothetical protein complement(1459358..1459903) Helicobacter hepaticus ATCC 51449 1492068 NP_861053.1 CDS HH1522 NC_004917.1 1460142 1460957 R predicted secreted protein; hypothetical protein complement(1460142..1460957) Helicobacter hepaticus ATCC 51449 1492069 NP_861054.1 CDS HH1523 NC_004917.1 1460961 1461254 R predicted secreted protein; hypothetical protein complement(1460961..1461254) Helicobacter hepaticus ATCC 51449 1492070 NP_861055.1 CDS HH1524 NC_004917.1 1461318 1461686 R predicted membrane-associated; hypothetical protein complement(1461318..1461686) Helicobacter hepaticus ATCC 51449 1492071 NP_861056.1 CDS HH1525 NC_004917.1 1461758 1462057 R predicted secreted protein; hypothetical protein complement(1461758..1462057) Helicobacter hepaticus ATCC 51449 1492072 NP_861057.1 CDS HH1526 NC_004917.1 1462173 1462880 R predicted secreted protein; hypothetical protein complement(1462173..1462880) Helicobacter hepaticus ATCC 51449 1492073 NP_861058.1 CDS HH1527 NC_004917.1 1462898 1463215 R predicted secreted protein; hypothetical protein complement(1462898..1463215) Helicobacter hepaticus ATCC 51449 1492074 NP_861059.1 CDS HH1528 NC_004917.1 1463461 1464798 R hypothetical protein complement(1463461..1464798) Helicobacter hepaticus ATCC 51449 1492075 NP_861060.1 CDS HH1529 NC_004917.1 1464820 1467849 R similar to Clostridium acetobutylicum CAC2401; predicted activator of 2-hydroxyglutaryl-CoA dehydratase; hypothetical protein complement(1464820..1467849) Helicobacter hepaticus ATCC 51449 1492076 NP_861061.1 CDS HH1530 NC_004917.1 1467923 1468615 R predicted membrane-associated; hypothetical protein complement(1467923..1468615) Helicobacter hepaticus ATCC 51449 1492077 NP_861062.1 CDS gmhA NC_004917.1 1468560 1469150 R phosphoheptose isomerase complement(1468560..1469150) Helicobacter hepaticus ATCC 51449 1492078 NP_861063.1 CDS HH1532 NC_004917.1 1469135 1470583 R similar to Campylobacter jejuni ADP-heptose synthase; hypothetical protein complement(1469135..1470583) Helicobacter hepaticus ATCC 51449 1492079 NP_861064.1 CDS HH1533 NC_004917.1 1470607 1471614 R ADP-L-glycero-D-manno-heptose-6-epimerase complement(1470607..1471614) Helicobacter hepaticus ATCC 51449 1492080 NP_861065.1 CDS HH1534 NC_004917.1 1471625 1472158 R phosphatase; hypothetical protein complement(1471625..1472158) Helicobacter hepaticus ATCC 51449 1492081 NP_861066.1 CDS HH1535 NC_004917.1 1472392 1473138 R similar to Campylobacter jejuni CJ1493c; predicted membrane-associated; hypothetical protein complement(1472392..1473138) Helicobacter hepaticus ATCC 51449 1492082 NP_861067.1 CDS prsA NC_004917.1 1473145 1474074 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(1473145..1474074) Helicobacter hepaticus ATCC 51449 1492083 NP_861068.1 CDS HH1537 NC_004917.1 1474131 1474841 R hypothetical protein complement(1474131..1474841) Helicobacter hepaticus ATCC 51449 1492084 NP_861069.1 CDS HH1538 NC_004917.1 1474976 1475068 D hypothetical protein 1474976..1475068 Helicobacter hepaticus ATCC 51449 1492085 NP_861070.1 CDS engA NC_004917.1 1475123 1476586 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1475123..1476586 Helicobacter hepaticus ATCC 51449 1492086 NP_861071.1 CDS metK NC_004917.1 1476601 1477761 R methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(1476601..1477761) Helicobacter hepaticus ATCC 51449 1492087 NP_861072.1 CDS HH1541 NC_004917.1 1477980 1479989 D hypothetical protein 1477980..1479989 Helicobacter hepaticus ATCC 51449 1492088 NP_861073.1 CDS HH1542 NC_004917.1 1480045 1480188 D predicted secreted protein; hypothetical protein 1480045..1480188 Helicobacter hepaticus ATCC 51449 1492089 NP_861074.1 CDS HH1543 NC_004917.1 1480257 1480847 D similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1480257..1480847 Helicobacter hepaticus ATCC 51449 1492090 NP_861075.1 CDS tsaA NC_004917.1 1480946 1481542 D alkyl hydroperoxide reductase 1480946..1481542 Helicobacter hepaticus ATCC 51449 1492091 NP_861076.1 CDS HH1545 NC_004917.1 1480949 1481569 R predicted membrane-associated; hypothetical protein complement(1480949..1481569) Helicobacter hepaticus ATCC 51449 1492092 NP_861077.1 CDS HH1546 NC_004917.1 1481826 1482209 D similar to Pseudomonas aeruginosa PA3235; predicted membrane-associated; hypothetical protein 1481826..1482209 Helicobacter hepaticus ATCC 51449 1492093 NP_861078.1 CDS actP NC_004917.1 1482209 1483858 D member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 1482209..1483858 Helicobacter hepaticus ATCC 51449 1492094 NP_861079.1 CDS uvrB NC_004917.1 1483878 1485854 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(1483878..1485854) Helicobacter hepaticus ATCC 51449 1492095 NP_861080.1 CDS HH1549 NC_004917.1 1485924 1486145 D similar to Campylobacter jejuni CJ0681; hypothetical protein 1485924..1486145 Helicobacter hepaticus ATCC 51449 1492096 NP_861081.1 CDS HH1550 NC_004917.1 1486145 1486411 D similar to Helicobacter pylori HP0386; hypothetical protein 1486145..1486411 Helicobacter hepaticus ATCC 51449 1492097 NP_861082.1 CDS priA NC_004917.1 1486408 1488321 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1486408..1488321 Helicobacter hepaticus ATCC 51449 1492098 NP_861083.1 CDS HH1552 NC_004917.1 1488377 1488817 D similar to Campylobacter jejuni CJ1460; hypothetical protein 1488377..1488817 Helicobacter hepaticus ATCC 51449 1492099 NP_861084.1 CDS HH1553 NC_004917.1 1488866 1489456 D DNA methylase; hypothetical protein 1488866..1489456 Helicobacter hepaticus ATCC 51449 1492100 NP_861085.1 CDS fliL NC_004917.1 1489459 1490049 D interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL 1489459..1490049 Helicobacter hepaticus ATCC 51449 1492101 NP_861086.1 CDS acpS NC_004917.1 1490054 1490416 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1490054..1490416 Helicobacter hepaticus ATCC 51449 1492102 NP_861087.1 CDS HH1556 NC_004917.1 1490409 1490567 R predicted secreted protein; hypothetical protein complement(1490409..1490567) Helicobacter hepaticus ATCC 51449 1492103 NP_861088.2 CDS aroF NC_004917.1 1490656 1491999 R phospho-2-dehydro-3-deoxyheptonate aldolase complement(1490656..1491999) Helicobacter hepaticus ATCC 51449 1492104 NP_861089.1 CDS HH1558 NC_004917.1 1491941 1492054 R hypothetical protein complement(1491941..1492054) Helicobacter hepaticus ATCC 51449 1492105 NP_861090.1 CDS HH1559 NC_004917.1 1492063 1492815 R oxidoreductase complement(1492063..1492815) Helicobacter hepaticus ATCC 51449 1492106 NP_861091.1 CDS HH1560 NC_004917.1 1492812 1493819 R similar to Pseudomonas aeruginosa PA1116; hypothetical protein complement(1492812..1493819) Helicobacter hepaticus ATCC 51449 1492107 NP_861092.1 CDS HH1561 NC_004917.1 1493782 1494357 R hypothetical protein complement(1493782..1494357) Helicobacter hepaticus ATCC 51449 1492108 NP_861093.1 CDS HH1562 NC_004917.1 1494380 1494481 R hypothetical protein complement(1494380..1494481) Helicobacter hepaticus ATCC 51449 1492109 NP_861094.1 CDS HH1563 NC_004917.1 1494552 1495316 R possible ATP/GTP-binding protein; hypothetical protein complement(1494552..1495316) Helicobacter hepaticus ATCC 51449 1492110 NP_861095.1 CDS clpB NC_004917.1 1495297 1497573 R ATP-binding subunit; ATP-dependent Clp protease ClpB complement(1495297..1497573) Helicobacter hepaticus ATCC 51449 1492111 NP_861096.1 CDS HH1565 NC_004917.1 1497586 1497849 R similar to Neisseria meningitidis NMB0837; hypothetical protein complement(1497586..1497849) Helicobacter hepaticus ATCC 51449 1492112 NP_861097.1 CDS HH1566 NC_004917.1 1497851 1497946 D hypothetical protein 1497851..1497946 Helicobacter hepaticus ATCC 51449 1492113 NP_861098.1 CDS oorC NC_004917.1 1498061 1498618 R Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoglutarate-acceptor oxidoreductase subunit OorC complement(1498061..1498618) Helicobacter hepaticus ATCC 51449 1492114 NP_861099.1 CDS oorB NC_004917.1 1498620 1499447 R Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; 2-oxoglutarate-acceptor oxidoreductase subunit OorB complement(1498620..1499447) Helicobacter hepaticus ATCC 51449 1492115 NP_861100.1 CDS oorA NC_004917.1 1499449 1500573 R Couples the complete acetyl-CoA oxidation to aromatic ring reduction by the use of the low-potential electron shuttle ferredoxin; 2-oxoglutarate-acceptor oxidoreductase subunit OorA complement(1499449..1500573) Helicobacter hepaticus ATCC 51449 1492116 NP_861101.1 CDS oorD NC_004917.1 1500583 1500894 R 2-oxoglutarate-acceptor oxidoreductase subunit OorD complement(1500583..1500894) Helicobacter hepaticus ATCC 51449 1492117 NP_861102.1 CDS mdh NC_004917.1 1500939 1501886 R malate dehydrogenase complement(1500939..1501886) Helicobacter hepaticus ATCC 51449 1492118 NP_861103.1 CDS pabC NC_004917.1 1502015 1502917 R similar to Helicobacter pylori aminodeoxychorismate lyase HP0587; hypothetical protein complement(1502015..1502917) Helicobacter hepaticus ATCC 51449 1492119 NP_861104.1 CDS HH1573 NC_004917.1 1502880 1505837 D predicted secreted protein; hypothetical protein 1502880..1505837 Helicobacter hepaticus ATCC 51449 1492120 NP_861105.1 CDS HH1574 NC_004917.1 1505888 1506163 D similar to Campylobacter jejuni CJ1397; hypothetical protein 1505888..1506163 Helicobacter hepaticus ATCC 51449 1492121 NP_861106.1 CDS nth NC_004917.1 1506171 1506863 D endonuclease III 1506171..1506863 Helicobacter hepaticus ATCC 51449 1492122 NP_861107.1 CDS HH1576 NC_004917.1 1506941 1507345 D hypothetical protein 1506941..1507345 Helicobacter hepaticus ATCC 51449 1492123 NP_861108.1 CDS fliN NC_004917.1 1507362 1507715 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 1507362..1507715 Helicobacter hepaticus ATCC 51449 1492124 NP_861109.1 CDS HH1578 NC_004917.1 1507833 1508624 D predicted membrane-associated; hypothetical protein 1507833..1508624 Helicobacter hepaticus ATCC 51449 1492125 NP_861110.1 CDS HH1579 NC_004917.1 1508624 1509382 D similar to Helicobacter pylori HP0582; TonB-like; hypothetical protein 1508624..1509382 Helicobacter hepaticus ATCC 51449 1492126 NP_861111.1 CDS HH1580 NC_004917.1 1509394 1509693 R hypothetical protein complement(1509394..1509693) Helicobacter hepaticus ATCC 51449 1492127 NP_861112.1 CDS thiC NC_004917.1 1509707 1511080 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(1509707..1511080) Helicobacter hepaticus ATCC 51449 1492128 NP_861113.1 CDS ispDF NC_004917.1 1511265 1512434 D bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1511265..1512434 Helicobacter hepaticus ATCC 51449 1492129 NP_861114.1 CDS HH1583 NC_004917.1 1512482 1513390 D similar to Campylobacter jejuni possible two-component response regulator CJ1608; hypothetical protein 1512482..1513390 Helicobacter hepaticus ATCC 51449 1492130 NP_861115.1 CDS pgpA NC_004917.1 1513387 1513872 D phosphatidylglycerophosphatase A 1513387..1513872 Helicobacter hepaticus ATCC 51449 1492131 NP_861116.1 CDS HH1585 NC_004917.1 1513894 1514412 R predicted secreted protein; hypothetical protein complement(1513894..1514412) Helicobacter hepaticus ATCC 51449 1492132 NP_861117.1 CDS HH1586 NC_004917.1 1514436 1514537 R hypothetical protein complement(1514436..1514537) Helicobacter hepaticus ATCC 51449 1492133 NP_861118.1 CDS HH1587 NC_004917.1 1514559 1515104 R hypothetical protein complement(1514559..1515104) Helicobacter hepaticus ATCC 51449 1492134 NP_861119.1 CDS thiF NC_004917.1 1515149 1515961 R thiamine biosynthesis protein ThiF complement(1515149..1515961) Helicobacter hepaticus ATCC 51449 1492135 NP_861120.1 CDS pflA NC_004917.1 1515961 1518330 R paralysed flagella protein PflA complement(1515961..1518330) Helicobacter hepaticus ATCC 51449 1492136 NP_861121.1 CDS nuoN NC_004917.1 1518370 1519848 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(1518370..1519848) Helicobacter hepaticus ATCC 51449 1492137 NP_861122.1 CDS nuoM NC_004917.1 1519850 1521427 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M complement(1519850..1521427) Helicobacter hepaticus ATCC 51449 1492138 NP_861123.1 CDS nuoL NC_004917.1 1521424 1523301 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(1521424..1523301) Helicobacter hepaticus ATCC 51449 1492139 NP_861124.1 CDS nuoK NC_004917.1 1523304 1523606 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K complement(1523304..1523606) Helicobacter hepaticus ATCC 51449 1492140 NP_861125.1 CDS nuoJ NC_004917.1 1523603 1524124 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J complement(1523603..1524124) Helicobacter hepaticus ATCC 51449 1492141 NP_861126.1 CDS nuoI NC_004917.1 1524117 1524755 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(1524117..1524755) Helicobacter hepaticus ATCC 51449 1492142 NP_861127.1 CDS nuoH NC_004917.1 1524764 1525762 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(1524764..1525762) Helicobacter hepaticus ATCC 51449 1492143 NP_861128.1 CDS nuoG NC_004917.1 1525759 1528233 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G complement(1525759..1528233) Helicobacter hepaticus ATCC 51449 1492144 NP_861129.1 CDS HH1598 NC_004917.1 1528230 1529042 R similar to Helicobacter pylori HP1265; predicted donor-ubiquinone reductase I; hypothetical protein complement(1528230..1529042) Helicobacter hepaticus ATCC 51449 1492145 NP_861130.1 CDS HH1599 NC_004917.1 1529039 1529269 R similar to Helicobacter pylori 1264; predicted donor-ubiquinone reductase I; hypothetical protein complement(1529039..1529269) Helicobacter hepaticus ATCC 51449 1492146 NP_861131.1 CDS nuoD NC_004917.1 1529279 1530508 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D complement(1529279..1530508) Helicobacter hepaticus ATCC 51449 1492147 NP_861132.1 CDS nuoC NC_004917.1 1530505 1531248 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit C complement(1530505..1531248) Helicobacter hepaticus ATCC 51449 1492148 NP_861133.1 CDS nuoB NC_004917.1 1531262 1531771 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(1531262..1531771) Helicobacter hepaticus ATCC 51449 1492149 NP_861134.1 CDS nuoA NC_004917.1 1531753 1532157 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit A complement(1531753..1532157) Helicobacter hepaticus ATCC 51449 1492150 NP_861135.2 CDS yebC NC_004917.1 1532285 1533001 R similar to Helicobacter pylori HP0162; hypothetical protein complement(1532285..1533001) Helicobacter hepaticus ATCC 51449 1492151 NP_861136.1 CDS HH1605 NC_004917.1 1532989 1533093 D hypothetical protein 1532989..1533093 Helicobacter hepaticus ATCC 51449 1492152 NP_861137.1 CDS hemB NC_004917.1 1533122 1534099 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(1533122..1534099) Helicobacter hepaticus ATCC 51449 1492153 NP_861138.1 CDS HH1607 NC_004917.1 1534110 1535369 R two-component system histidine kinase complement(1534110..1535369) Helicobacter hepaticus ATCC 51449 1492154 NP_861139.1 CDS HH1608 NC_004917.1 1535384 1536049 R BaeR-like; two-component system response regulator complement(1535384..1536049) Helicobacter hepaticus ATCC 51449 1492155 NP_861140.1 CDS HH1609 NC_004917.1 1536243 1536359 D hypothetical protein 1536243..1536359 Helicobacter hepaticus ATCC 51449 1492156 NP_861141.1 CDS HH1610 NC_004917.1 1536474 1536833 R hypothetical protein complement(1536474..1536833) Helicobacter hepaticus ATCC 51449 1492157 NP_861142.1 CDS HH1611 NC_004917.1 1536803 1537066 R similar to Campylobacter jejuni CJ0787; hypothetical protein complement(1536803..1537066) Helicobacter hepaticus ATCC 51449 1492158 NP_861143.1 CDS HH1612 NC_004917.1 1537143 1537946 R similar to Helicobacter pylori HP1182; hypothetical protein complement(1537143..1537946) Helicobacter hepaticus ATCC 51449 1492159 NP_861144.1 CDS HH1613 NC_004917.1 1537936 1538244 R predicted membrane-associated; hypothetical protein complement(1537936..1538244) Helicobacter hepaticus ATCC 51449 1492160 NP_861145.1 CDS HH1614 NC_004917.1 1538248 1539579 R similar to Helicobacter pylori HP1181; predicted efflux transporter; hypothetical protein complement(1538248..1539579) Helicobacter hepaticus ATCC 51449 1492161 NP_861146.1 CDS ppiA NC_004917.1 1539596 1540129 R peptidyl-prolyl cis-trans isomerase (rotamase) complement(1539596..1540129) Helicobacter hepaticus ATCC 51449 1492162 NP_861147.1 CDS HH1616 NC_004917.1 1540369 1541265 D similar to Helicobacter pylori HP1440; hypothetical protein 1540369..1541265 Helicobacter hepaticus ATCC 51449 1492163 NP_861148.1 CDS HH1617 NC_004917.1 1541277 1541369 R hypothetical protein complement(1541277..1541369) Helicobacter hepaticus ATCC 51449 1492164 NP_861149.1 CDS HH1618 NC_004917.1 1541379 1542764 D protease 1541379..1542764 Helicobacter hepaticus ATCC 51449 1492165 NP_861150.1 CDS purC NC_004917.1 1542780 1543490 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1542780..1543490 Helicobacter hepaticus ATCC 51449 1492166 NP_861151.1 CDS purS NC_004917.1 1543500 1543742 D predicted PurS-like protein; hypothetical protein 1543500..1543742 Helicobacter hepaticus ATCC 51449 1492167 NP_861152.1 CDS purQ NC_004917.1 1543739 1544407 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1543739..1544407 Helicobacter hepaticus ATCC 51449 1492168 NP_861153.1 CDS HH1622 NC_004917.1 1544420 1545514 D similar to Helicobacter pylori JHP1268; predicted membrane-associated; hypothetical protein 1544420..1545514 Helicobacter hepaticus ATCC 51449 1492169 NP_861154.1 CDS plsC NC_004917.1 1545498 1546226 D 1-acyl-glycerol-3-phosphate acyltransferase 1545498..1546226 Helicobacter hepaticus ATCC 51449 1492170 NP_861155.1 CDS pyrD NC_004917.1 1546443 1547849 D Catalyzes (S)-dihydroorotate + O(2) = orotate + H(2)O(2) in the pyrimidine biosynthesis pathway; dihydroorotate dehydrogenase 1546443..1547849 Helicobacter hepaticus ATCC 51449 1492171 NP_861156.1 CDS HH1625 NC_004917.1 1547880 1549178 D zinc protease 1547880..1549178 Helicobacter hepaticus ATCC 51449 1492172 NP_861157.1 CDS dapA NC_004917.1 1549181 1550062 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1549181..1550062 Helicobacter hepaticus ATCC 51449 1492173 NP_861158.1 CDS HH1627 NC_004917.1 1550059 1550862 D Acts on the hydroxyl group at position 7 of the steroid frame; 7-alpha-hydroxysteroid dehydrogenase 1550059..1550862 Helicobacter hepaticus ATCC 51449 1492174 NP_861159.1 CDS HH1628 NC_004917.1 1551027 1552229 D Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1551027..1552229 Helicobacter hepaticus ATCC 51449 1492175 NP_861160.1 CDS HH1629 NC_004917.1 1552335 1553096 D predicted secreted protein; hypothetical protein 1552335..1553096 Helicobacter hepaticus ATCC 51449 1492176 NP_861161.1 CDS HH1630 NC_004917.1 1553201 1554865 D similar to Campylobacter jejuni CJ1679; hypothetical protein 1553201..1554865 Helicobacter hepaticus ATCC 51449 1492177 NP_861162.1 CDS dagA NC_004917.1 1554891 1556297 R amino-acid transport protein complement(1554891..1556297) Helicobacter hepaticus ATCC 51449 1492178 NP_861163.1 CDS HH1632 NC_004917.1 1556472 1557098 R similar to Escherichia coli YeaS; predicted membrane-associated; hypothetical protein complement(1556472..1557098) Helicobacter hepaticus ATCC 51449 1492179 NP_861164.1 CDS gyrA NC_004917.1 1557237 1559711 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1557237..1559711 Helicobacter hepaticus ATCC 51449 1492180 NP_861165.1 CDS HH1634 NC_004917.1 1559752 1560225 D predicted secreted protein; hypothetical protein 1559752..1560225 Helicobacter hepaticus ATCC 51449 1492181 NP_861166.1 CDS flgR NC_004917.1 1560222 1561532 D transcriptional activator FlgR 1560222..1561532 Helicobacter hepaticus ATCC 51449 1492182 NP_861167.1 CDS HH1636 NC_004917.1 1561553 1562074 D predicted secreted protein; hypothetical protein 1561553..1562074 Helicobacter hepaticus ATCC 51449 1492183 NP_861168.1 CDS HH1637 NC_004917.1 1562121 1562984 R similar to Vibrio cholerae VC0271; predicted membrane-associated; hypothetical protein complement(1562121..1562984) Helicobacter hepaticus ATCC 51449 1492184 NP_861169.1 CDS HH1638 NC_004917.1 1563169 1564134 R similar to Vibrio cholerae VC0271; predicted membrane-associated; hypothetical protein complement(1563169..1564134) Helicobacter hepaticus ATCC 51449 1492185 NP_861170.1 CDS HH1639 NC_004917.1 1564262 1565158 R predicted secreted protein; hypothetical protein complement(1564262..1565158) Helicobacter hepaticus ATCC 51449 1492186 NP_861171.1 CDS HH1640 NC_004917.1 1565151 1566386 R similar to Helicobacter pylori HP1026; recombination factor protein RarA complement(1565151..1566386) Helicobacter hepaticus ATCC 51449 1492187 NP_861172.1 CDS hspR NC_004917.1 1566380 1566757 R heat shock transcriptional regulator complement(1566380..1566757) Helicobacter hepaticus ATCC 51449 1492188 NP_861173.1 CDS cbpA NC_004917.1 1566783 1567676 R curved DNA-binding protein CbpA complement(1566783..1567676) Helicobacter hepaticus ATCC 51449 1492189 NP_861174.1 CDS HH1643 NC_004917.1 1567835 1570750 D recombination protein RecB 1567835..1570750 Helicobacter hepaticus ATCC 51449 1492190 NP_861175.1 CDS HH1644 NC_004917.1 1571029 1572411 D similar to Helicobacter pylori NA(+)/H(+) antiporter 1 jhp1447; hypothetical protein 1571029..1572411 Helicobacter hepaticus ATCC 51449 1492191 NP_861176.1 CDS nhaA NC_004917.1 1572432 1573766 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1572432..1573766 Helicobacter hepaticus ATCC 51449 1492192 NP_861177.1 CDS yajC NC_004917.1 1573817 1574110 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1573817..1574110 Helicobacter hepaticus ATCC 51449 1492193 NP_861178.1 CDS secD NC_004917.1 1574117 1575955 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1574117..1575955 Helicobacter hepaticus ATCC 51449 1492194 NP_861179.1 CDS secF NC_004917.1 1575959 1576930 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1575959..1576930 Helicobacter hepaticus ATCC 51449 1492195 NP_861180.1 CDS HH1649 NC_004917.1 1576941 1577282 D similar to Helicobacter pylori conserved hypothetical integral membrane protein; hypothetical protein 1576941..1577282 Helicobacter hepaticus ATCC 51449 1492196 NP_861181.1 CDS HH1650 NC_004917.1 1577318 1578031 D hypothetical protein 1577318..1578031 Helicobacter hepaticus ATCC 51449 1492197 NP_861182.1 CDS HH1651 NC_004917.1 1578043 1580133 D predicted secreted protein; hypothetical protein 1578043..1580133 Helicobacter hepaticus ATCC 51449 1492198 NP_861183.1 CDS HH1652 NC_004917.1 1580137 1580598 R similar to Campylobacter jejuni hydrolase; hypothetical protein complement(1580137..1580598) Helicobacter hepaticus ATCC 51449 1492199 NP_861184.1 CDS flaA_2 NC_004917.1 1580835 1582361 D FlaA; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin A 1580835..1582361 Helicobacter hepaticus ATCC 51449 1492200 NP_861185.1 CDS HH1654 NC_004917.1 1582612 1583280 D similar to Escherichia coli YfcA; predicted membrane-associated; hypothetical protein 1582612..1583280 Helicobacter hepaticus ATCC 51449 1492201 NP_861186.1 CDS HH1655 NC_004917.1 1583353 1583769 D similar to Helicobacter pylori HP0721; predicted secreted protein; hypothetical protein 1583353..1583769 Helicobacter hepaticus ATCC 51449 1492202 NP_861187.1 CDS HH1656 NC_004917.1 1583821 1584492 D similar to Campylobacter jejuni chemotaxis two-component response regulator CJ1223c; hypothetical protein 1583821..1584492 Helicobacter hepaticus ATCC 51449 1492203 NP_861188.1 CDS HH1657 NC_004917.1 1584505 1585788 D similar to Campylobacter jejuni chemotaxis two-component histidine kinase CJ1222c; hypothetical protein 1584505..1585788 Helicobacter hepaticus ATCC 51449 1492204 NP_861189.1 CDS dnaB NC_004917.1 1585869 1587332 D unwinds double stranded DNA; replicative DNA helicase 1585869..1587332 Helicobacter hepaticus ATCC 51449 1492205 NP_861190.1 CDS HH1659 NC_004917.1 1587342 1588679 D similar to Helicobacter pylori competence protein ComE3; hypothetical protein 1587342..1588679 Helicobacter hepaticus ATCC 51449 1492206 NP_861191.1 CDS HH1660 NC_004917.1 1588652 1589941 R possible UDP-glucose 6-dehydrogenase; hypothetical protein complement(1588652..1589941) Helicobacter hepaticus ATCC 51449 1492207 NP_861192.1 CDS HH1661 NC_004917.1 1589941 1590522 R possible acyltransferase; hypothetical protein complement(1589941..1590522) Helicobacter hepaticus ATCC 51449 1492208 NP_861193.1 CDS wbpB NC_004917.1 1590519 1591481 R lipopolysaccharide biosynthesis protein wbpB complement(1590519..1591481) Helicobacter hepaticus ATCC 51449 1492209 NP_861194.1 CDS HH1663 NC_004917.1 1591489 1592415 R similar to Campylobacter jejuni CJ0404; predicted transmembrane protein; hypothetical protein complement(1591489..1592415) Helicobacter hepaticus ATCC 51449 1492210 NP_861195.1 CDS HH1664 NC_004917.1 1592460 1593005 R similar to Helicobacter pylori HP0184; hypothetical protein complement(1592460..1593005) Helicobacter hepaticus ATCC 51449 1492211 NP_861196.1 CDS glyA NC_004917.1 1593017 1594267 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(1593017..1594267) Helicobacter hepaticus ATCC 51449 1492212 NP_861197.1 CDS lysS NC_004917.1 1594267 1595823 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(1594267..1595823) Helicobacter hepaticus ATCC 51449 1492213 NP_861198.1 CDS HH1667 NC_004917.1 1595836 1596459 R similar to Helicobacter pylori HP0181; predicted membrane-associated; hypothetical protein complement(1595836..1596459) Helicobacter hepaticus ATCC 51449 1492214 NP_861199.1 CDS ubiA NC_004917.1 1596645 1597541 D UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 1596645..1597541 Helicobacter hepaticus ATCC 51449 1492215 NP_861200.1 CDS HH1669 NC_004917.1 1597531 1598097 D hypothetical protein 1597531..1598097 Helicobacter hepaticus ATCC 51449 1492216 NP_861201.1 CDS HH1670 NC_004917.1 1598101 1598628 D similar to Helicobacter pylori HP1358; predicted membrane-associated; hypothetical protein 1598101..1598628 Helicobacter hepaticus ATCC 51449 1492217 NP_861202.1 CDS HH1671 NC_004917.1 1598650 1599837 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1598650..1599837 Helicobacter hepaticus ATCC 51449 1492218 NP_861203.1 CDS HH1672 NC_004917.1 1599841 1601133 D similar to Helicobacter pylori HP0580; predicted membrane-associated; hypothetical protein 1599841..1601133 Helicobacter hepaticus ATCC 51449 1492219 NP_861204.1 CDS HH1673 NC_004917.1 1601130 1601804 D predicted membrane-associated; hypothetical protein 1601130..1601804 Helicobacter hepaticus ATCC 51449 1492220 NP_861205.1 CDS HH1674 NC_004917.1 1601878 1603848 D similar to Helicobacter pylori HP0578; predicted membrane-associated; hypothetical protein 1601878..1603848 Helicobacter hepaticus ATCC 51449 1492221 NP_861206.1 CDS HH1675 NC_004917.1 1603852 1604619 D hypothetical protein 1603852..1604619 Helicobacter hepaticus ATCC 51449 1492222 NP_861207.1 CDS HH1676 NC_004917.1 1604639 1604773 D similar to Helicobacter pylori Hop-family proteins; may become fused with HH1677 due to slipped strand mispairing; hypothetical protein 1604639..1604773 Helicobacter hepaticus ATCC 51449 1492223 NP_861208.1 CDS omp30 NC_004917.1 1604823 1605452 D similar to Helicobacter pylori Hop-family proteins; may become fused with HH1676 due to slipped strand mispairing; hypothetical protein 1604823..1605452 Helicobacter hepaticus ATCC 51449 1492224 NP_861209.1 CDS HH1678 NC_004917.1 1605554 1606231 R similar to Campylobacter jejuni CJ0186c; predicted membrane-associated; hypothetical protein complement(1605554..1606231) Helicobacter hepaticus ATCC 51449 1492225 NP_861210.1 CDS corA NC_004917.1 1606267 1607235 R Mg and Co transporter complement(1606267..1607235) Helicobacter hepaticus ATCC 51449 1492226 NP_861211.1 CDS pgsA NC_004917.1 1607380 1607925 D phosphatidylglycerophosphate synthase 1607380..1607925 Helicobacter hepaticus ATCC 51449 1492227 NP_861212.1 CDS HH1681 NC_004917.1 1607922 1608977 D similar to Campylobacter jejuni CJ1068; predicted metallopeptidase; hypothetical protein 1607922..1608977 Helicobacter hepaticus ATCC 51449 1492228 NP_861213.1 CDS HH1682 NC_004917.1 1608987 1609655 D similar to Helicobacter pylori HP0395; hypothetical protein 1608987..1609655 Helicobacter hepaticus ATCC 51449 1492229 NP_861214.1 CDS HH1683 NC_004917.1 1609652 1610038 D predicted secreted protein; hypothetical protein 1609652..1610038 Helicobacter hepaticus ATCC 51449 1492230 NP_861215.1 CDS HH1684 NC_004917.1 1610064 1611374 D hypothetical protein 1610064..1611374 Helicobacter hepaticus ATCC 51449 1492231 NP_861216.1 CDS HH1685 NC_004917.1 1611384 1612118 D similar to Campylobacter jejuni CJ0984; hypothetical protein 1611384..1612118 Helicobacter hepaticus ATCC 51449 1492232 NP_861217.1 CDS pycB NC_004917.1 1612194 1613993 D catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 1612194..1613993 Helicobacter hepaticus ATCC 51449 1492233 NP_861218.1 CDS nifS_1 NC_004917.1 1613968 1615164 D NifS family aminotransferase 1613968..1615164 Helicobacter hepaticus ATCC 51449 1492234 NP_861219.1 CDS carB NC_004917.1 1615161 1618514 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(1615161..1618514) Helicobacter hepaticus ATCC 51449 1492235 NP_861220.1 CDS HH1689 NC_004917.1 1618719 1618895 D predicted membrane-associated; hypothetical protein 1618719..1618895 Helicobacter hepaticus ATCC 51449 1492236 NP_861221.1 CDS HH1690 NC_004917.1 1618906 1619121 R predicted membrane-associated; hypothetical protein complement(1618906..1619121) Helicobacter hepaticus ATCC 51449 1492237 NP_861222.1 CDS purU NC_004917.1 1619130 1619984 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(1619130..1619984) Helicobacter hepaticus ATCC 51449 1492238 NP_861223.1 CDS HH1692 NC_004917.1 1619981 1620865 R similar to Helicobacter pylori HP1435; predicted protease; hypothetical protein complement(1619981..1620865) Helicobacter hepaticus ATCC 51449 1492239 NP_861224.1 CDS HH1693 NC_004917.1 1620888 1621268 R similar to Campylobacter jejuni CJ1388; hypothetical protein complement(1620888..1621268) Helicobacter hepaticus ATCC 51449 1492240 NP_861225.1 CDS HH1694 NC_004917.1 1621338 1621805 D predicted secreted protein; hypothetical protein 1621338..1621805 Helicobacter hepaticus ATCC 51449 1492241 NP_861226.1 CDS flgL NC_004917.1 1621909 1624476 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 1621909..1624476 Helicobacter hepaticus ATCC 51449 1492242 NP_861227.1 CDS HH1696 NC_004917.1 1624473 1625231 D hypothetical protein 1624473..1625231 Helicobacter hepaticus ATCC 51449 1492243 NP_861228.1 CDS HH1697 NC_004917.1 1625279 1625959 D similar to Campylobacter jejuni chemotaxis two-component response regulator CJ0355c; hypothetical protein 1625279..1625959 Helicobacter hepaticus ATCC 51449 1492244 NP_861229.1 CDS HH1698 NC_004917.1 1626045 1626146 R hypothetical protein complement(1626045..1626146) Helicobacter hepaticus ATCC 51449 1492245 NP_861230.2 CDS speE NC_004917.1 1626168 1626956 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 1626168..1626956 Helicobacter hepaticus ATCC 51449 1492246 NP_861231.1 CDS coaE NC_004917.1 1626959 1627582 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1626959..1627582 Helicobacter hepaticus ATCC 51449 1492247 NP_861232.1 CDS dapF NC_004917.1 1627596 1628390 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1627596..1628390 Helicobacter hepaticus ATCC 51449 1492248 NP_861233.1 CDS HH1702 NC_004917.1 1628399 1628650 R similar to Campylobacter jejuni CJ0667; hypothetical protein complement(1628399..1628650) Helicobacter hepaticus ATCC 51449 1492249 NP_861234.1 CDS HH1703 NC_004917.1 1628650 1629099 R similar to Helicobacter pylori JHP0852; hypothetical protein complement(1628650..1629099) Helicobacter hepaticus ATCC 51449 1492250 NP_861235.1 CDS flgE NC_004917.1 1629286 1631442 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1629286..1631442 Helicobacter hepaticus ATCC 51449 1492251 NP_861236.1 CDS HH1705 NC_004917.1 1631612 1632538 D similar to Campylobacter jejuni possible periplasmic protein; hypothetical protein 1631612..1632538 Helicobacter hepaticus ATCC 51449 1492252 NP_861237.1 CDS HH1706 NC_004917.1 1632561 1633073 R similar to Helicobacter pylori JHP0273; predicted membrane-associated; hypothetical protein complement(1632561..1633073) Helicobacter hepaticus ATCC 51449 1492253 NP_861238.1 CDS HH1707 NC_004917.1 1633186 1634340 D FAD/NAD(P)-binding domain; oxidoreductase 1633186..1634340 Helicobacter hepaticus ATCC 51449 1492254 NP_861239.1 CDS pcnB NC_004917.1 1634237 1635643 D poly(A) polymerase 1634237..1635643 Helicobacter hepaticus ATCC 51449 1492255 NP_861240.1 CDS HH1709 NC_004917.1 1635670 1637574 R similar to Campylobacter jejuni CiaB protein; hypothetical protein complement(1635670..1637574) Helicobacter hepaticus ATCC 51449 1492256 NP_861241.1 CDS HH1710 NC_004917.1 1637582 1637674 D hypothetical protein 1637582..1637674 Helicobacter hepaticus ATCC 51449 1492257 NP_861242.1 CDS htpX NC_004917.1 1637704 1638633 D metalloprotease; heat shock protein HtpX 1637704..1638633 Helicobacter hepaticus ATCC 51449 1492258 NP_861243.1 CDS folE NC_004917.1 1638709 1639329 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1638709..1639329 Helicobacter hepaticus ATCC 51449 1492259 NP_861244.1 CDS HH1713 NC_004917.1 1639445 1640572 D similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1639445..1640572 Helicobacter hepaticus ATCC 51449 1492260 NP_861245.1 CDS HH1714 NC_004917.1 1640747 1641535 R similar to Deinococcus radiodurans histidinol phosphatase DR0470; hypothetical protein complement(1640747..1641535) Helicobacter hepaticus ATCC 51449 1492261 NP_861246.1 CDS HH1715 NC_004917.1 1641680 1642093 D hypothetical protein 1641680..1642093 Helicobacter hepaticus ATCC 51449 1492262 NP_861247.1 CDS HH1716 NC_004917.1 1642090 1642713 D similar to Helicobacter pylori HP1485; hypothetical protein 1642090..1642713 Helicobacter hepaticus ATCC 51449 1492263 NP_861248.1 CDS HH1717 NC_004917.1 1642731 1643171 D similar to Helicobacter pylori HP1484; predicted membrane-associated; hypothetical protein 1642731..1643171 Helicobacter hepaticus ATCC 51449 1492264 NP_861249.1 CDS argH NC_004917.1 1643182 1644600 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1643182..1644600 Helicobacter hepaticus ATCC 51449 1492265 NP_861250.1 CDS ubiE NC_004917.1 1644593 1645324 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1644593..1645324 Helicobacter hepaticus ATCC 51449 1492266 NP_861251.1 CDS HH1720 NC_004917.1 1645523 1647007 D malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 1645523..1647007 Helicobacter hepaticus ATCC 51449 1492267 NP_861252.1 CDS hisD NC_004917.1 1647128 1648438 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1647128..1648438 Helicobacter hepaticus ATCC 51449 1492268 NP_861253.1 CDS HH1722 NC_004917.1 1648442 1648705 D similar to Campylobacter jejuni CJ0539; hypothetical protein 1648442..1648705 Helicobacter hepaticus ATCC 51449 1492269 NP_861254.1 CDS HH1723 NC_004917.1 1648698 1649174 D similar to Helicobacter pylori HP0242; hypothetical protein 1648698..1649174 Helicobacter hepaticus ATCC 51449 1492270 NP_861255.1 CDS HH1724 NC_004917.1 1649171 1650082 D possible geranyl transferase; hypothetical protein 1649171..1650082 Helicobacter hepaticus ATCC 51449 1492271 NP_861256.1 CDS hemA NC_004917.1 1650093 1651415 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1650093..1651415 Helicobacter hepaticus ATCC 51449 1492272 NP_861257.1 CDS proS NC_004917.1 1651425 1653191 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1651425..1653191 Helicobacter hepaticus ATCC 51449 1492273 NP_861258.1 CDS hemC NC_004917.1 1653201 1654166 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1653201..1654166 Helicobacter hepaticus ATCC 51449 1492274 NP_861259.1 CDS HH1728 NC_004917.1 1654306 1654410 R hypothetical protein complement(1654306..1654410) Helicobacter hepaticus ATCC 51449 1492275 NP_861260.1 CDS HH1729 NC_004917.1 1654478 1654918 D similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1654478..1654918 Helicobacter hepaticus ATCC 51449 1492276 NP_861261.1 CDS rbn NC_004917.1 1654971 1655858 R tRNA-processing ribonuclease BN complement(1654971..1655858) Helicobacter hepaticus ATCC 51449 1492277 NP_861262.1 CDS bioB NC_004917.1 1655870 1656721 R catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase complement(1655870..1656721) Helicobacter hepaticus ATCC 51449 1492278 NP_861263.1 CDS xseA NC_004917.1 1656817 1658070 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1656817..1658070 Helicobacter hepaticus ATCC 51449 1492279 NP_861264.1 CDS HH1733 NC_004917.1 1658084 1658776 R hypothetical protein complement(1658084..1658776) Helicobacter hepaticus ATCC 51449 1492280 NP_861265.1 CDS selD NC_004917.1 1658852 1659745 R selenophosphate synthase complement(1658852..1659745) Helicobacter hepaticus ATCC 51449 1492281 NP_861266.1 CDS HH1735 NC_004917.1 1659762 1659869 D hypothetical protein 1659762..1659869 Helicobacter hepaticus ATCC 51449 1492282 NP_861267.1 CDS HH1736 NC_004917.1 1659908 1660522 R similar to Campylobacter jejuni CJ1505c; hypothetical protein complement(1659908..1660522) Helicobacter hepaticus ATCC 51449 1492283 NP_861268.1 CDS acnB NC_004917.1 1660705 1663284 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(1660705..1663284) Helicobacter hepaticus ATCC 51449 1492284 NP_861269.1 CDS HH1738 NC_004917.1 1663392 1663628 D predicted membrane-associated; hypothetical protein 1663392..1663628 Helicobacter hepaticus ATCC 51449 1492285 NP_861270.1 CDS nifS_2 NC_004917.1 1663628 1665055 D similar to Helicobacter pylori HP0405; predicted NifS-like protein; hypothetical protein 1663628..1665055 Helicobacter hepaticus ATCC 51449 1492286 NP_861271.1 CDS htpG NC_004917.1 1665135 1666991 R molecular chaperone; heat shock protein 90 complement(1665135..1666991) Helicobacter hepaticus ATCC 51449 1492287 NP_861272.1 CDS HH1741 NC_004917.1 1667185 1668099 D similar to Campylobacter jejuni CJ1618c; hypothetical protein 1667185..1668099 Helicobacter hepaticus ATCC 51449 1492288 NP_861273.1 CDS HH1742 NC_004917.1 1668186 1669325 D predicted secreted protein; hypothetical protein 1668186..1669325 Helicobacter hepaticus ATCC 51449 1492289 NP_861274.1 CDS HH1743 NC_004917.1 1669344 1670603 D predicted secreted protein; hypothetical protein 1669344..1670603 Helicobacter hepaticus ATCC 51449 1492290 NP_861275.2 CDS rpmE NC_004917.1 1670762 1670965 D RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1670762..1670965 Helicobacter hepaticus ATCC 51449 1492291 NP_861276.1 CDS HH1745 NC_004917.1 1670970 1671830 D hypothetical protein 1670970..1671830 Helicobacter hepaticus ATCC 51449 1492292 NP_861277.1 CDS HH1746 NC_004917.1 1671835 1672524 D possible rRNA methylase; hypothetical protein 1671835..1672524 Helicobacter hepaticus ATCC 51449 1492293 NP_861278.1 CDS HH1747 NC_004917.1 1672511 1673668 D predicted membrane-associated; hypothetical protein 1672511..1673668 Helicobacter hepaticus ATCC 51449 1492294 NP_861279.1 CDS HH1748 NC_004917.1 1673662 1674471 D similar to Helicobacter pylori HP0555; predicted secreted protein; hypothetical protein 1673662..1674471 Helicobacter hepaticus ATCC 51449 1492295 NP_861280.1 CDS HH1749 NC_004917.1 1674507 1675715 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1674507..1675715 Helicobacter hepaticus ATCC 51449 1492296 NP_861281.1 CDS hom NC_004917.1 1675725 1677020 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1675725..1677020 Helicobacter hepaticus ATCC 51449 1492297 NP_861282.1 CDS HH1751 NC_004917.1 1677044 1677376 D similar to Helicobacter pylori HP0823; hypothetical protein 1677044..1677376 Helicobacter hepaticus ATCC 51449 1492298 NP_861283.1 CDS HH1752 NC_004917.1 1677385 1677771 R hypothetical protein complement(1677385..1677771) Helicobacter hepaticus ATCC 51449 1492299 NP_861284.1 CDS HH1753 NC_004917.1 1677761 1678234 R hypothetical protein complement(1677761..1678234) Helicobacter hepaticus ATCC 51449 1492300 NP_861285.1 CDS HH1754 NC_004917.1 1678266 1678358 D hypothetical protein 1678266..1678358 Helicobacter hepaticus ATCC 51449 1492301 NP_861286.1 CDS HH1755 NC_004917.1 1678355 1678816 R predicted secreted protein; hypothetical protein complement(1678355..1678816) Helicobacter hepaticus ATCC 51449 1492302 NP_861287.1 CDS HH1756 NC_004917.1 1678833 1681379 R serine/threonine protein phosphatase complement(1678833..1681379) Helicobacter hepaticus ATCC 51449 1492303 NP_861288.1 CDS HH1757 NC_004917.1 1681415 1681606 R similar to Helicobacter pylori HP0085; predicted secreted protein; hypothetical protein complement(1681415..1681606) Helicobacter hepaticus ATCC 51449 1492304 NP_861289.1 CDS HH1758 NC_004917.1 1681603 1682415 R similar to Campylobacter jejuni CJ0141c; possible ABC transporter; hypothetical protein complement(1681603..1682415) Helicobacter hepaticus ATCC 51449 1492305 NP_861290.1 CDS fecE NC_004917.1 1682408 1683139 R ATP-binding protein; ABC transporter complement(1682408..1683139) Helicobacter hepaticus ATCC 51449 1492306 NP_861291.1 CDS HH1760 NC_004917.1 1683143 1684012 R similar to Campylobacter jejuni CJ0143c; predicted periplasmic solute binding protein for ABC transport system; hypothetical protein complement(1683143..1684012) Helicobacter hepaticus ATCC 51449 1492307 NP_861292.1 CDS HH1761 NC_004917.1 1684009 1685379 R similar to Helicobacter pylori HP0087; predicted secreted protein; hypothetical protein complement(1684009..1685379) Helicobacter hepaticus ATCC 51449 1492308 NP_861293.1 CDS HH1762 NC_004917.1 1685380 1685763 R similar to Campylobacter jejuni CJ0717; hypothetical protein complement(1685380..1685763) Helicobacter hepaticus ATCC 51449 1492309 NP_861294.1 CDS HH1763 NC_004917.1 1685775 1686275 R phosphotyrosine protein phosphatase complement(1685775..1686275) Helicobacter hepaticus ATCC 51449 1492310 NP_861295.1 CDS HH1764 NC_004917.1 1686272 1687546 R Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; chlorohydrolase complement(1686272..1687546) Helicobacter hepaticus ATCC 51449 1492311 NP_861296.1 CDS HH1765 NC_004917.1 1687546 1688370 R similar to Helicobacter pylori HP0983; predicted membrane-associated; hypothetical protein complement(1687546..1688370) Helicobacter hepaticus ATCC 51449 1492312 NP_861297.1 CDS pyrC_1 NC_004917.1 1688370 1689650 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(1688370..1689650) Helicobacter hepaticus ATCC 51449 1492313 NP_861298.1 CDS ccdA NC_004917.1 1689652 1690392 R cytochrome c biogenesis protein CcdA complement(1689652..1690392) Helicobacter hepaticus ATCC 51449 1492314 NP_861299.1 CDS deaD NC_004917.1 1690505 1692097 D ATP-dependent RNA helicase DeaD 1690505..1692097 Helicobacter hepaticus ATCC 51449 1492315 NP_861300.1 CDS HH1769 NC_004917.1 1692110 1692691 D hypothetical protein 1692110..1692691 Helicobacter hepaticus ATCC 51449 1492316 NP_861301.1 CDS HH1770 NC_004917.1 1692710 1693534 R similar to Helicobacter pylori JHP0739; predicted membrane-associated; hypothetical protein complement(1692710..1693534) Helicobacter hepaticus ATCC 51449 1492317 NP_861302.1 CDS adk NC_004917.1 1693612 1694184 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1693612..1694184 Helicobacter hepaticus ATCC 51449 1492318 NP_861303.1 CDS yihK NC_004917.1 1694417 1696096 D GTP-binding protein 1694417..1696096 Helicobacter hepaticus ATCC 51449 1492319 NP_861304.1 CDS frxA NC_004917.1 1696168 1696791 D similar to Helicobacter pylori HP0642 (FrxA); predicted nitroreductase; hypothetical protein 1696168..1696791 Helicobacter hepaticus ATCC 51449 1492320 NP_861305.1 CDS nrdA NC_004917.1 1696801 1699176 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1696801..1699176 Helicobacter hepaticus ATCC 51449 1492321 NP_861306.1 CDS HH1775 NC_004917.1 1699244 1699597 D predicted membrane-associated; hypothetical protein 1699244..1699597 Helicobacter hepaticus ATCC 51449 1492322 NP_861307.1 CDS HH1776 NC_004917.1 1699537 1700616 R alpha-1,3-fucosyltransferase complement(1699537..1700616) Helicobacter hepaticus ATCC 51449 1492323 NP_861308.1 CDS prfA NC_004917.1 1700613 1701680 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(1700613..1701680) Helicobacter hepaticus ATCC 51449 1492324 NP_861309.2 CDS rpsT NC_004917.1 1701706 1701978 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(1701706..1701978) Helicobacter hepaticus ATCC 51449 1492325 NP_861310.1 CDS glmM NC_004917.1 1702066 1703427 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1702066..1703427 Helicobacter hepaticus ATCC 51449 1492326 NP_861311.1 CDS lspA NC_004917.1 1703450 1703950 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1703450..1703950 Helicobacter hepaticus ATCC 51449 1492327 NP_861312.1 CDS HH1781 NC_004917.1 1704224 1705066 D predicted secreted protein; hypothetical protein 1704224..1705066 Helicobacter hepaticus ATCC 51449 1492328 NP_861313.1 CDS HH1782 NC_004917.1 1705076 1705948 D predicted secreted protein; hypothetical protein 1705076..1705948 Helicobacter hepaticus ATCC 51449 1492329 NP_861314.1 CDS HH1783 NC_004917.1 1706005 1706241 D similar to Campylobacter jejuni CJ0916c; hypothetical protein 1706005..1706241 Helicobacter hepaticus ATCC 51449 1492330 NP_861315.1 CDS oppB NC_004917.1 1706321 1707373 D permease OppB; oligopeptide ABC transporter 1706321..1707373 Helicobacter hepaticus ATCC 51449 1492331 NP_861316.1 CDS oppC NC_004917.1 1707366 1708433 D permease OppC; oligopeptide ABC transporter 1707366..1708433 Helicobacter hepaticus ATCC 51449 1492332 NP_861317.1 CDS oppD NC_004917.1 1708549 1710003 D ATP-binding protein OppD; oligopeptide ABC transporter 1708549..1710003 Helicobacter hepaticus ATCC 51449 1492333 NP_861318.1 CDS magIII NC_004917.1 1709942 1710655 D 3-methyladenine DNA glycosylase 1709942..1710655 Helicobacter hepaticus ATCC 51449 1492334 NP_861319.1 CDS HH1788 NC_004917.1 1710683 1711123 D hypothetical protein 1710683..1711123 Helicobacter hepaticus ATCC 51449 1492335 NP_861320.1 CDS HH1789 NC_004917.1 1711202 1711333 D predicted membrane-associated; hypothetical protein 1711202..1711333 Helicobacter hepaticus ATCC 51449 1492336 NP_861321.1 CDS HH1790 NC_004917.1 1711412 1711690 D predicted secreted protein; hypothetical protein 1711412..1711690 Helicobacter hepaticus ATCC 51449 1492337 NP_861322.1 CDS HH1791 NC_004917.1 1711838 1712500 D hypothetical protein 1711838..1712500 Helicobacter hepaticus ATCC 51449 1492338 NP_861323.1 CDS ttdA NC_004917.1 1712563 1713408 D Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase 1712563..1713408 Helicobacter hepaticus ATCC 51449 1492339 NP_861324.1 CDS ttdB NC_004917.1 1713419 1713976 D beta subunit; fumarate hydratase 1713419..1713976 Helicobacter hepaticus ATCC 51449 1492340 NP_861325.1 CDS HH1794 NC_004917.1 1714136 1714438 D hypothetical protein 1714136..1714438 Helicobacter hepaticus ATCC 51449 1492341 NP_861326.1 CDS HH1795 NC_004917.1 1715100 1717001 R similar to Campylobacter jejuni CJ1337; predicted secreted protein; hypothetical protein complement(1715100..1717001) Helicobacter hepaticus ATCC 51449 1492342 NP_861327.1 CDS flaB NC_004917.1 1717033 1718577 R FlaB; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin B complement(1717033..1718577) Helicobacter hepaticus ATCC 51449 1492343 NP_861328.1 CDS HH1797 NC_004917.1 1718603 1718710 R hypothetical protein complement(1718603..1718710) Helicobacter hepaticus ATCC 51449 1492344 NP_861329.1 CDS topA NC_004917.1 1718740 1720989 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1718740..1720989 Helicobacter hepaticus ATCC 51449 1492345 NP_861330.1 CDS HH1799 NC_004917.1 1721226 1721777 D similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1721226..1721777 Helicobacter hepaticus ATCC 51449 1492346 NP_861331.1 CDS HH1800 NC_004917.1 1721952 1722263 R similar to Thermotoga maritima TM0763; hypothetical protein complement(1721952..1722263) Helicobacter hepaticus ATCC 51449 1492347 NP_861332.1 CDS aspS NC_004917.1 1722273 1724018 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1722273..1724018) Helicobacter hepaticus ATCC 51449 1492348 NP_861333.1 CDS cheV_2 NC_004917.1 1724067 1725035 R similar to Helicobacter pylori HP0616 (CheV2); chemotaxis signal transduction protein CheV complement(1724067..1725035) Helicobacter hepaticus ATCC 51449 1492349 NP_861334.1 CDS ligA NC_004917.1 1725150 1727102 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 1725150..1727102 Helicobacter hepaticus ATCC 51449 1492350 NP_861335.1 CDS HH1804 NC_004917.1 1727109 1727717 R similar to Helicobacter pylori HP1029; hypothetical protein complement(1727109..1727717) Helicobacter hepaticus ATCC 51449 1492351 NP_861336.1 CDS dapE NC_004917.1 1727735 1728913 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(1727735..1728913) Helicobacter hepaticus ATCC 51449 1492352 NP_861337.1 CDS HH1806 NC_004917.1 1728915 1729301 R hypothetical protein complement(1728915..1729301) Helicobacter hepaticus ATCC 51449 1492353 NP_861338.1 CDS HH1807 NC_004917.1 1729294 1729920 R similar to Pseudomonas aeruginosa PA1644; hypothetical protein complement(1729294..1729920) Helicobacter hepaticus ATCC 51449 1492354 NP_861339.1 CDS HH1808 NC_004917.1 1729917 1731149 R ADP-heptose:LPS heptosyltransferase complement(1729917..1731149) Helicobacter hepaticus ATCC 51449 1492355 NP_861340.1 CDS hisS NC_004917.1 1731325 1732653 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1731325..1732653 Helicobacter hepaticus ATCC 51449 1492356 NP_861341.1 CDS pepF NC_004917.1 1732655 1734511 D oligoendopeptidase PepF 1732655..1734511 Helicobacter hepaticus ATCC 51449 1492357 NP_861342.1 CDS HH1811 NC_004917.1 1734480 1734971 D similar to Campylobacter jejuni CJ1100; hypothetical protein 1734480..1734971 Helicobacter hepaticus ATCC 51449 1492358 NP_861343.1 CDS HH1812 NC_004917.1 1735054 1735722 D similar to Helicobacter pylori JHP0420; hypothetical protein 1735054..1735722 Helicobacter hepaticus ATCC 51449 1492359 NP_861344.1 CDS HH1813 NC_004917.1 1735740 1736555 D similar to Helicobacter pylori JHP0420; hypothetical protein 1735740..1736555 Helicobacter hepaticus ATCC 51449 1492360 NP_861345.1 CDS HH1814 NC_004917.1 1736556 1736864 D similar to Helicobacter pylori HP0467; predicted membrane-associated; hypothetical protein 1736556..1736864 Helicobacter hepaticus ATCC 51449 1492361 NP_861346.1 CDS HH1815 NC_004917.1 1736919 1737806 D similar to Helicobacter pylori HP0466; hypothetical protein 1736919..1737806 Helicobacter hepaticus ATCC 51449 1492362 NP_861347.1 CDS HH1816 NC_004917.1 1737851 1738348 D hypothetical protein 1737851..1738348 Helicobacter hepaticus ATCC 51449 1492363 NP_861348.1 CDS HH1817 NC_004917.1 1738356 1738775 R similar to Campylobacter jejuni CJ0436; hypothetical protein complement(1738356..1738775) Helicobacter hepaticus ATCC 51449 1492364 NP_861349.1 CDS tpx NC_004917.1 1738784 1739281 R thiol peroxidase complement(1738784..1739281) Helicobacter hepaticus ATCC 51449 1492365 NP_861350.1 CDS phoH NC_004917.1 1739349 1740782 D phosphate starvation-inducible protein PhoH; hypothetical protein 1739349..1740782 Helicobacter hepaticus ATCC 51449 1492366 NP_861351.1 CDS HH1820 NC_004917.1 1740779 1741489 D predicted membrane-associated; hypothetical protein 1740779..1741489 Helicobacter hepaticus ATCC 51449 1492367 NP_861352.1 CDS HH1821 NC_004917.1 1741519 1742238 D predicted lipoprotein; hypothetical protein 1741519..1742238 Helicobacter hepaticus ATCC 51449 1492368 NP_861353.1 CDS HH1822 NC_004917.1 1742338 1742661 D similar to Campylobacter jejuni CJ1429c; may become fused with HH1823 due to slipped strand mispairing; hypothetical protein 1742338..1742661 Helicobacter hepaticus ATCC 51449 1492369 NP_861354.1 CDS HH1823 NC_004917.1 1742726 1743280 D similar to Campylobacter jejuni CJ1429c; may become fused with HH1822 due to slipped strand mispairing; hypothetical protein 1742726..1743280 Helicobacter hepaticus ATCC 51449 1492370 NP_861355.1 CDS ppsA NC_004917.1 1743351 1745780 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(1743351..1745780) Helicobacter hepaticus ATCC 51449 1492371 NP_861356.1 CDS purL NC_004917.1 1745942 1748179 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1745942..1748179 Helicobacter hepaticus ATCC 51449 1492372 NP_861357.1 CDS HH1826 NC_004917.1 1748192 1748740 D predicted secreted protein; hypothetical protein 1748192..1748740 Helicobacter hepaticus ATCC 51449 1492373 NP_861358.1 CDS HH1827 NC_004917.1 1748798 1750264 R similar to Helicobacter pylori HP0235; hypothetical protein complement(1748798..1750264) Helicobacter hepaticus ATCC 51449 1492374 NP_861359.1 CDS thiE NC_004917.1 1750328 1750972 R thiamine monophosphate synthase complement(1750328..1750972) Helicobacter hepaticus ATCC 51449 1492375 NP_861360.1 CDS HH1829 NC_004917.1 1750979 1751704 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1750979..1751704) Helicobacter hepaticus ATCC 51449 1492376 NP_861361.1 CDS mltC NC_004917.1 1751701 1752927 R membrane-bound lytic murein transglycosylase C (MltC) complement(1751701..1752927) Helicobacter hepaticus ATCC 51449 1492377 NP_861362.1 CDS HH1831 NC_004917.1 1753076 1754008 D similar to Helicobacter pylori HP0117; hypothetical protein 1753076..1754008 Helicobacter hepaticus ATCC 51449 1492378 NP_861363.1 CDS sodF NC_004917.1 1754121 1754756 D superoxide dismutase 1754121..1754756 Helicobacter hepaticus ATCC 51449 1492379 NP_861364.1 CDS nadC NC_004917.1 1754869 1755699 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 1754869..1755699 Helicobacter hepaticus ATCC 51449 1492380 NP_861365.1 CDS thiL NC_004917.1 1755703 1756704 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1755703..1756704 Helicobacter hepaticus ATCC 51449 1492381 NP_861366.1 CDS HH1835 NC_004917.1 1756714 1757430 D similar to Campylobacter jejuni CJ1374c; hypothetical protein 1756714..1757430 Helicobacter hepaticus ATCC 51449 1492382 NP_861367.1 CDS HH1836 NC_004917.1 1757518 1759320 D predicted membrane-associated; hypothetical protein 1757518..1759320 Helicobacter hepaticus ATCC 51449 1492383 NP_861368.1 CDS HH1837 NC_004917.1 1759343 1759915 D predicted membrane-associated; hypothetical protein 1759343..1759915 Helicobacter hepaticus ATCC 51449 1492384 NP_861369.1 CDS psd NC_004917.1 1759912 1760697 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1759912..1760697 Helicobacter hepaticus ATCC 51449 1492385 NP_861370.1 CDS nadA NC_004917.1 1760723 1761736 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1760723..1761736 Helicobacter hepaticus ATCC 51449 1492386 NP_861371.1 CDS HH1840 NC_004917.1 1761899 1762396 D predicted membrane-associated; hypothetical protein 1761899..1762396 Helicobacter hepaticus ATCC 51449 1492387 NP_861372.1 CDS HH1841 NC_004917.1 1762366 1762698 D hypothetical protein 1762366..1762698 Helicobacter hepaticus ATCC 51449 1492388 NP_861373.1 CDS gcp NC_004917.1 1762706 1763782 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(1762706..1763782) Helicobacter hepaticus ATCC 51449 1492389 NP_861374.1 CDS HH1843 NC_004917.1 1763848 1764960 D similar to Campylobacter jejuni CJ0949c; hypothetical protein 1763848..1764960 Helicobacter hepaticus ATCC 51449 1492390 NP_861375.1 CDS thiJ NC_004917.1 1765098 1765667 R 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein ThiJ complement(1765098..1765667) Helicobacter hepaticus ATCC 51449 1492391 NP_861376.1 CDS xerD NC_004917.1 1765915 1767003 D integrase/recombinase XerD 1765915..1767003 Helicobacter hepaticus ATCC 51449 1492392 NP_861377.1 CDS HH1846 NC_004917.1 1767013 1767570 D similar to Helicobacter pylori HP1580; predicted membrane-associated; hypothetical protein 1767013..1767570 Helicobacter hepaticus ATCC 51449 1492393 NP_861378.1 CDS frpB NC_004917.1 1768331 1770379 D iron-regulated outer membrane protein FrpB 1768331..1770379 Helicobacter hepaticus ATCC 51449 1492394 NP_861379.1 CDS ppa NC_004917.1 1770458 1770958 D catalyzes the hydrolysis of pyrophosphate; inorganic pyrophosphatase 1770458..1770958 Helicobacter hepaticus ATCC 51449 1492395 NP_861380.1 CDS HH1849 NC_004917.1 1770994 1772418 D biotin carboxylase; catalyses the carboxylation of the carrier protein which then transfers the carboxyl group to form malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase subunit A 1770994..1772418 Helicobacter hepaticus ATCC 51449 1492396 NP_861381.1 CDS HH1850 NC_004917.1 1772435 1773868 D similar to Helicobacter pylori HP1363; hypothetical protein 1772435..1773868 Helicobacter hepaticus ATCC 51449 1492397 NP_861382.1 CDS thiG NC_004917.1 1773865 1774656 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1773865..1774656 Helicobacter hepaticus ATCC 51449 1492398 NP_861383.1 CDS HH1852 NC_004917.1 1774672 1775391 D similar to Campylobacter jejuni CJ0590; hypothetical protein 1774672..1775391 Helicobacter hepaticus ATCC 51449 1492399 NP_861384.1 CDS HH1853 NC_004917.1 1775563 1776204 D hypothetical protein 1775563..1776204 Helicobacter hepaticus ATCC 51449 1492400 NP_861385.1 CDS HH1854 NC_004917.1 1776268 1776993 D hypothetical protein 1776268..1776993 Helicobacter hepaticus ATCC 51449 1492401 NP_861386.1 CDS HH1855 NC_004917.1 1776997 1777635 D similar to Escherichia coli ECS2092; predicted secreted protein; hypothetical protein 1776997..1777635 Helicobacter hepaticus ATCC 51449 1492402 NP_861387.1 CDS HH1856 NC_004917.1 1777647 1778864 R ATP-binding component; ABC transporter complement(1777647..1778864) Helicobacter hepaticus ATCC 51449 1492403 NP_861388.1 CDS HH1857 NC_004917.1 1778864 1779553 R ATP-binding component; ABC transporter complement(1778864..1779553) Helicobacter hepaticus ATCC 51449 1492404 NP_861389.1 CDS HH1858 NC_004917.1 1779571 1780866 R similar to Campylobacter jejuni CJ0606; predicted membrane-associated; hypothetical protein complement(1779571..1780866) Helicobacter hepaticus ATCC 51449 1492405 NP_861390.1 CDS HH1859 NC_004917.1 1780863 1782374 R similar to Campylobacter jejuni CJ0364c; predicted outer membrane channel protein; hypothetical protein complement(1780863..1782374) Helicobacter hepaticus ATCC 51449 1492406 NP_861391.1 CDS HH1860 NC_004917.1 1782375 1782473 R hypothetical protein complement(1782375..1782473) Helicobacter hepaticus ATCC 51449 1492407 NP_861392.1 CDS HH1861 NC_004917.1 1782509 1783933 D similar to Helicobacter pylori JHP0016; hypothetical protein 1782509..1783933 Helicobacter hepaticus ATCC 51449 1492408 NP_861393.1 CDS HH1862 NC_004917.1 1783971 1784531 D similar to Helicobacter pylori HP1457; hypothetical protein 1783971..1784531 Helicobacter hepaticus ATCC 51449 1492409 NP_861394.1 CDS HH1863 NC_004917.1 1784556 1785134 D similar to Helicobacter pylori HP1456; predicted lipoprotein; hypothetical protein 1784556..1785134 Helicobacter hepaticus ATCC 51449 1492410 NP_861395.1 CDS HH1864 NC_004917.1 1785166 1786080 D predicted secreted protein; hypothetical protein 1785166..1786080 Helicobacter hepaticus ATCC 51449 1492411 NP_861396.1 CDS murE NC_004917.1 1786083 1787474 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(1786083..1787474) Helicobacter hepaticus ATCC 51449 1492412 NP_861397.1 CDS HH1866 NC_004917.1 1787446 1788087 R similar to Helicobacter pylori HP1493; hypothetical protein complement(1787446..1788087) Helicobacter hepaticus ATCC 51449 1492413 NP_861398.1 CDS HH1867 NC_004917.1 1788093 1788368 R similar to Helicobacter pylori HP1492; predicted NifU-like protein; hypothetical protein complement(1788093..1788368) Helicobacter hepaticus ATCC 51449 1492414 NP_861399.1 CDS HH1868 NC_004917.1 1788566 1789567 D C4-dicarboxylatebinding periplasmic protein 1788566..1789567 Helicobacter hepaticus ATCC 51449 1492415 NP_861400.1 CDS HH1869 NC_004917.1 1789585 1790202 D similar to Wolinella succinogenes small integral C4-dicarboxylate membrane transport protein; hypothetical protein 1789585..1790202 Helicobacter hepaticus ATCC 51449 1492416 NP_861401.1 CDS HH1870 NC_004917.1 1790213 1791487 D similar to Wolinella succinogenes large integral C4-dicarboxylate membrane transport protein; hypothetical protein 1790213..1791487 Helicobacter hepaticus ATCC 51449 1492417 NP_861402.1 CDS HH1871 NC_004917.1 1791499 1793088 D phosphate permease 1791499..1793088 Helicobacter hepaticus ATCC 51449 1492418 NP_861403.1 CDS HH1872 NC_004917.1 1793147 1794469 D similar to Helicobacter pylori HP1490; predicted membrane-associated; hypothetical protein 1793147..1794469 Helicobacter hepaticus ATCC 51449 1492419 NP_861404.1 CDS hemE NC_004917.1 1794458 1795480 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(1794458..1795480) Helicobacter hepaticus ATCC 51449 1492420 NP_861405.1 CDS asd NC_004917.1 1795495 1796520 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(1795495..1796520) Helicobacter hepaticus ATCC 51449 1492421 NP_861406.1 CDS cstA NC_004917.1 1796866 1799037 R carbon starvation protein A-like protein complement(1796866..1799037) Helicobacter hepaticus ATCC 51449 1492422 HHt01 tRNA HHt01 NC_004917.1 36848 36922 D tRNA-Pro 36848..36922 Helicobacter hepaticus ATCC 51449 3284739 HHt02 tRNA HHt02 NC_004917.1 36945 37018 D tRNA-His 36945..37018 Helicobacter hepaticus ATCC 51449 3284741 HHt03 tRNA HHt03 NC_004917.1 37039 37112 D tRNA-Arg 37039..37112 Helicobacter hepaticus ATCC 51449 3284740 HHt04 tRNA HHt04 NC_004917.1 138302 138376 D tRNA-Pro 138302..138376 Helicobacter hepaticus ATCC 51449 3284755 HHt05 tRNA HHt05 NC_004917.1 202423 202494 D tRNA-Gln 202423..202494 Helicobacter hepaticus ATCC 51449 3284744 HHt06 tRNA HHt06 NC_004917.1 202580 202653 D tRNA-Met 202580..202653 Helicobacter hepaticus ATCC 51449 3284745 HHt07 tRNA HHt07 NC_004917.1 202750 202823 D tRNA-Arg 202750..202823 Helicobacter hepaticus ATCC 51449 3284746 HHt08 tRNA HHt08 NC_004917.1 359306 359378 D tRNA-Trp 359306..359378 Helicobacter hepaticus ATCC 51449 3284763 HHt09 tRNA HHt09 NC_004917.1 360866 360937 D tRNA-Thr 360866..360937 Helicobacter hepaticus ATCC 51449 3284766 HHt10 tRNA HHt10 NC_004917.1 361000 361073 D tRNA-Gly 361000..361073 Helicobacter hepaticus ATCC 51449 3284756 HHt11 tRNA HHt11 NC_004917.1 361138 361219 D tRNA-Tyr 361138..361219 Helicobacter hepaticus ATCC 51449 3284757 HHt12 tRNA HHt12 NC_004917.1 361277 361349 D tRNA-Thr 361277..361349 Helicobacter hepaticus ATCC 51449 3284758 HHt13 tRNA HHt13 NC_004917.1 362462 362546 D tRNA-Ser 362462..362546 Helicobacter hepaticus ATCC 51449 3284759 HHt14 tRNA HHt14 NC_004917.1 362584 362655 D tRNA-Cys 362584..362655 Helicobacter hepaticus ATCC 51449 3284760 HHt15 tRNA HHt15 NC_004917.1 362728 362812 D tRNA-Leu 362728..362812 Helicobacter hepaticus ATCC 51449 3284761 HHt16 tRNA HHt16 NC_004917.1 362892 362963 D tRNA-Gly 362892..362963 Helicobacter hepaticus ATCC 51449 3284736 HHt17 tRNA HHt17 NC_004917.1 438133 438204 D tRNA-Asn 438133..438204 Helicobacter hepaticus ATCC 51449 3284748 HHt18 tRNA HHt18 NC_004917.1 478741 478814 D tRNA-Arg 478741..478814 Helicobacter hepaticus ATCC 51449 3284747 HHt19 tRNA HHt19 NC_004917.1 571534 571617 D tRNA-Leu 571534..571617 Helicobacter hepaticus ATCC 51449 3284768 HHt20 tRNA HHt20 NC_004917.1 571676 571757 D tRNA-Leu 571676..571757 Helicobacter hepaticus ATCC 51449 3284767 HHt21 tRNA HHt21 NC_004917.1 585217 585298 D tRNA-Leu 585217..585298 Helicobacter hepaticus ATCC 51449 3284762 HHt22 tRNA HHt22 NC_004917.1 753860 753933 D tRNA-Arg 753860..753933 Helicobacter hepaticus ATCC 51449 3284764 HHt23 tRNA HHt23 NC_004917.1 758259 758332 D tRNA-Met 758259..758332 Helicobacter hepaticus ATCC 51449 3284765 HHt24 tRNA HHt24 NC_004917.1 871458 871530 D tRNA-Lys 871458..871530 Helicobacter hepaticus ATCC 51449 3284742 HHt25 tRNA HHt25 NC_004917.1 891418 891491 D tRNA-Asp 891418..891491 Helicobacter hepaticus ATCC 51449 3284729 HHt26 tRNA HHt26 NC_004917.1 891524 891596 D tRNA-Val 891524..891596 Helicobacter hepaticus ATCC 51449 3284730 HHt27 tRNA HHt27 NC_004917.1 891638 891709 D tRNA-Glu 891638..891709 Helicobacter hepaticus ATCC 51449 3284735 HHt28 tRNA HHt28 NC_004917.1 891727 891799 D tRNA-Lys 891727..891799 Helicobacter hepaticus ATCC 51449 3284731 HHt29 tRNA HHt29 NC_004917.1 899541 899614 D tRNA-Glu 899541..899614 Helicobacter hepaticus ATCC 51449 3284734 HHt30 tRNA HHt30 NC_004917.1 937862 937936 D tRNA-Met 937862..937936 Helicobacter hepaticus ATCC 51449 3284752 HHt31 tRNA HHt31 NC_004917.1 956521 956593 D tRNA-Ala 956521..956593 Helicobacter hepaticus ATCC 51449 3284753 HHt32 tRNA HHt32 NC_004917.1 956639 956712 D tRNA-Ile 956639..956712 Helicobacter hepaticus ATCC 51449 3284751 HHt33 tRNA HHt33 NC_004917.1 1128009 1128081 D tRNA-Phe 1128009..1128081 Helicobacter hepaticus ATCC 51449 3284743 HHt34 tRNA HHt34 NC_004917.1 1243493 1243580 D tRNA-Ser 1243493..1243580 Helicobacter hepaticus ATCC 51449 3284738 HHt35 tRNA HHt35 NC_004917.1 1422441 1422525 D tRNA-Ser 1422441..1422525 Helicobacter hepaticus ATCC 51449 3284737 HHt36 tRNA HHt36 NC_004917.1 1546239 1546311 D tRNA-Ala 1546239..1546311 Helicobacter hepaticus ATCC 51449 3284733 HHt37 tRNA HHt37 NC_004917.1 1703932 1704004 D tRNA-Val 1703932..1704004 Helicobacter hepaticus ATCC 51449 3284732 HHr01 rRNA HHr01 NC_004917.1 953184 953315 R 5S ribosomal RNA complement(953184..953315) Helicobacter hepaticus ATCC 51449 3284754 HHr02 rRNA HHr02 NC_004917.1 953460 956339 R 23S ribosomal RNA complement(953460..956339) Helicobacter hepaticus ATCC 51449 3284750 HHr03 rRNA HHr03 NC_004917.1 956872 958328 R 16S ribosomal RNA complement(956872..958328) Helicobacter hepaticus ATCC 51449 3284749