-- dump date 20120504_150126 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_005784568.1 385224643 12366036 complement(13..429) 1 NC_017375.1 COG: COG0781; Pfam: PF01029; InterPro: IPR006027; transcription antitermination factor NusB 429 nusB 12366036 nusB Helicobacter pylori 83 transcription antitermination factor NusB YP_005784568.1 13 R 585538 CDS YP_005784569.1 385224644 12366038 complement(431..901) 1 NC_017375.1 COG: COG0054; Pfam: PF00885; InterPro: IPR002180; 6,7-dimethyl-8-ribityllumazine synthase 901 ribH 12366038 ribH Helicobacter pylori 83 6,7-dimethyl-8-ribityllumazine synthase YP_005784569.1 431 R 585538 CDS YP_005784570.1 385224645 12366040 complement(911..1741) 1 NC_017375.1 COG: COG2877; Pfam: PF00793; InterPro: IPR006218; 3-deoxy-7-phosphoheptulonate synthase 1741 kdsA 12366040 kdsA Helicobacter pylori 83 3-deoxy-7-phosphoheptulonate synthase YP_005784570.1 911 R 585538 CDS YP_005784571.1 385224646 12366049 complement(1728..2393) 1 NC_017375.1 COG: COG0288; Pfam: PF00484; InterPro: IPR001765; carbonate dehydratase 2393 cynT 12366049 cynT Helicobacter pylori 83 carbonate dehydratase YP_005784571.1 1728 R 585538 CDS YP_005784572.1 385224647 12366051 2516..3199 1 NC_017375.1 COG: COG0284; Pfam: PF00215; InterPro: IPR013785; orotidine 5'-phosphate decarboxylase 3199 pyrF 12366051 pyrF Helicobacter pylori 83 orotidine 5'-phosphate decarboxylase YP_005784572.1 2516 D 585538 CDS YP_005784573.1 385224648 12366210 3200..4030 1 NC_017375.1 COG: COG0414; Pfam: PF02569; InterPro: IPR003721; pantoate--beta-alanine ligase 4030 panC 12366210 panC Helicobacter pylori 83 pantoate--beta-alanine ligase YP_005784573.1 3200 D 585538 CDS YP_005784574.1 385224649 12364785 4676..4885 1 NC_017375.1 hypothetical protein 4885 12364785 HMPREF0462_0007 Helicobacter pylori 83 hypothetical protein YP_005784574.1 4676 D 585538 CDS YP_005784575.1 385224650 12364786 complement(4922..5092) 1 NC_017375.1 hypothetical protein 5092 12364786 HMPREF0462_0008 Helicobacter pylori 83 hypothetical protein YP_005784575.1 4922 R 585538 CDS YP_005784576.1 385224651 12364787 complement(5219..7210) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HopZ 7210 hopZ 12364787 hopZ Helicobacter pylori 83 outer membrane protein HopZ YP_005784576.1 5219 R 585538 CDS YP_005784577.1 385224652 12364788 7416..7556 1 NC_017375.1 hypothetical protein 7556 12364788 HMPREF0462_0010 Helicobacter pylori 83 hypothetical protein YP_005784577.1 7416 D 585538 CDS YP_005784578.1 385224653 12364789 complement(7600..9240) 1 NC_017375.1 COG: COG0459; Pfam: PF00118; InterPro: IPR002423; chaperonin GroL 9240 groL 12364789 groL Helicobacter pylori 83 chaperonin GroL YP_005784578.1 7600 R 585538 CDS YP_005784579.1 385224654 12364790 complement(9266..9622) 1 NC_017375.1 COG: COG0234; Pfam: PF00166; InterPro: IPR001476; chaperone GroES 9622 groES 12364790 groES Helicobacter pylori 83 chaperone GroES YP_005784579.1 9266 R 585538 CDS YP_005784580.1 385224655 12364791 9897..11576 1 NC_017375.1 COG: COG0358; Pfam: PF01807,PF08275,PF01751; InterPro: IPR006295; DNA primase 11576 dnaG 12364791 dnaG Helicobacter pylori 83 DNA primase YP_005784580.1 9897 D 585538 CDS YP_005784581.1 385224656 12364792 11573..12625 1 NC_017375.1 COG: COG0482; Pfam: PF06508; tRNA methyltransferase 12625 trmU 12364792 trmU Helicobacter pylori 83 tRNA methyltransferase YP_005784581.1 11573 D 585538 CDS YP_005784582.1 385224657 12364793 12714..13541 1 NC_017375.1 hypothetical protein 13541 12364793 HMPREF0462_0015 Helicobacter pylori 83 hypothetical protein YP_005784582.1 12714 D 585538 CDS YP_005784583.1 385224658 12364794 13686..13967 1 NC_017375.1 hypothetical protein 13967 12364794 HMPREF0462_0016 Helicobacter pylori 83 hypothetical protein YP_005784583.1 13686 D 585538 CDS YP_005784584.1 385224659 12364795 13967..14230 1 NC_017375.1 hypothetical protein 14230 12364795 HMPREF0462_0017 Helicobacter pylori 83 hypothetical protein YP_005784584.1 13967 D 585538 CDS YP_005784585.1 385224660 12364796 14232..16595 1 NC_017375.1 COG: COG3451; Pfam: PF03135; InterPro: IPR004346; DNA transfer protein 16595 virB4 12364796 virB4 Helicobacter pylori 83 DNA transfer protein YP_005784585.1 14232 D 585538 CDS YP_005784586.1 385224661 12364798 16807..18237 1 NC_017375.1 COG: COG3014; hypothetical protein 18237 12364798 HMPREF0462_0019 Helicobacter pylori 83 hypothetical protein YP_005784586.1 16807 D 585538 CDS YP_005784587.1 385224662 12364799 18338..19303 1 NC_017375.1 COG: COG0835; Pfam: PF01584,PF00072; InterPro: IPR002545; chemotaxis protein 19303 cheV 12364799 cheV Helicobacter pylori 83 chemotaxis protein YP_005784587.1 18338 D 585538 CDS YP_005784588.1 385224663 12364800 19300..20517 1 NC_017375.1 COG: COG0019; Pfam: PF00278; InterPro: IPR005730; carboxynorspermidine decarboxylase 20517 nspC 12364800 nspC Helicobacter pylori 83 carboxynorspermidine decarboxylase YP_005784588.1 19300 D 585538 CDS YP_005784589.1 385224664 12364801 complement(20527..21099) 1 NC_017375.1 Pfam: PF01569; InterPro: IPR000326; lipid A 1-phosphatase 21099 12364801 HMPREF0462_0022 Helicobacter pylori 83 lipid A 1-phosphatase YP_005784589.1 20527 R 585538 CDS YP_005784590.1 385224665 12364802 complement(21110..22675) 1 NC_017375.1 COG: COG2194; Pfam: PF08019,PF00884; InterPro: IPR000917; integral membrane protein 22675 12364802 HMPREF0462_0023 Helicobacter pylori 83 integral membrane protein YP_005784590.1 21110 R 585538 CDS YP_005784591.1 385224666 12364803 22666..22842 1 NC_017375.1 hypothetical protein 22842 12364803 HMPREF0462_0024 Helicobacter pylori 83 hypothetical protein YP_005784591.1 22666 D 585538 CDS YP_005784592.1 385224667 12364804 complement(23050..25122) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HopD 25122 hopD 12364804 hopD Helicobacter pylori 83 outer membrane protein HopD YP_005784592.1 23050 R 585538 CDS YP_005784593.1 385224668 12364805 complement(25819..26019) 1 NC_017375.1 hypothetical protein 26019 12364805 HMPREF0462_0026 Helicobacter pylori 83 hypothetical protein YP_005784593.1 25819 R 585538 CDS YP_005784594.1 385224669 12364806 complement(26055..26882) 1 NC_017375.1 COG: COG0287; Pfam: PF02153; InterPro: IPR003099; prephenate dehydrogenase 26882 tyrA 12364806 tyrA Helicobacter pylori 83 prephenate dehydrogenase YP_005784594.1 26055 R 585538 CDS YP_005784595.1 385224670 12364807 complement(26907..29402) 1 NC_017375.1 COG: COG0466; Pfam: PF02190,PF00004,PF05362; InterPro: IPR004815; ATP-dependent protease La 29402 lon 12364807 lon Helicobacter pylori 83 ATP-dependent protease La YP_005784595.1 26907 R 585538 CDS YP_005784596.1 385224671 12364808 complement(29443..30105) 1 NC_017375.1 COG: COG4105; competence lipoprotein 30105 comL 12364808 comL Helicobacter pylori 83 competence lipoprotein YP_005784596.1 29443 R 585538 CDS YP_005784597.1 385224672 12364809 complement(30148..30294) 1 NC_017375.1 hypothetical protein 30294 12364809 HMPREF0462_0030 Helicobacter pylori 83 hypothetical protein YP_005784597.1 30148 R 585538 CDS YP_005784598.1 385224673 12364810 30494..30895 1 NC_017375.1 COG: COG1699; Pfam: PF02623; InterPro: IPR003775; flagellar assembly factor FliW 2 30895 12364810 HMPREF0462_0031 Helicobacter pylori 83 flagellar assembly factor FliW 2 YP_005784598.1 30494 D 585538 CDS YP_005784599.1 385224674 12364811 31080..31559 1 NC_017375.1 COG: COG0764; Pfam: PF07977; InterPro: IPR010084; (3R)-hydroxymyristoyl-ACP dehydratase 31559 fabZ 12364811 fabZ Helicobacter pylori 83 (3R)-hydroxymyristoyl-ACP dehydratase YP_005784599.1 31080 D 585538 CDS YP_005784600.1 385224675 12364812 31563..32375 1 NC_017375.1 COG: COG1043; Pfam: PF00132; InterPro: IPR010137; acyl-CoA dehydrogenase 32375 lpxA 12364812 lpxA Helicobacter pylori 83 acyl-CoA dehydrogenase YP_005784600.1 31563 D 585538 CDS YP_005784601.1 385224676 12364813 32377..33723 1 NC_017375.1 COG: COG1219; Pfam: PF07724; InterPro: IPR004487; ATP-dependent Clp protease ATP-binding subunit 33723 clpX 12364813 clpX Helicobacter pylori 83 ATP-dependent Clp protease ATP-binding subunit YP_005784601.1 32377 D 585538 CDS YP_005784602.1 385224677 12364814 33766..34809 1 NC_017375.1 COG: COG1077; Pfam: PF06723; InterPro: IPR004753; rod shape-determining protein 34809 12364814 HMPREF0462_0035 Helicobacter pylori 83 rod shape-determining protein YP_005784602.1 33766 D 585538 CDS YP_005784603.1 385224678 12364815 34813..35559 1 NC_017375.1 COG: COG1792; Pfam: PF04085; InterPro: IPR007221; rod shape-determining protein MreC 35559 mreC 12364815 mreC Helicobacter pylori 83 rod shape-determining protein MreC YP_005784603.1 34813 D 585538 CDS YP_005784604.1 385224679 12364816 complement(35609..38515) 1 NC_017375.1 Pfam: PF04851; type III restriction enzyme R protein 38515 12364816 HMPREF0462_0037 Helicobacter pylori 83 type III restriction enzyme R protein YP_005784604.1 35609 R 585538 CDS YP_005784605.1 385224680 12364817 complement(38525..39424) 1 NC_017375.1 COG: COG2189; Pfam: PF01555; InterPro: IPR002941; type III restriction enzyme M protein 39424 12364817 HMPREF0462_0038 Helicobacter pylori 83 type III restriction enzyme M protein YP_005784605.1 38525 R 585538 CDS YP_005784606.1 385224681 12364818 complement(39559..39969) 1 NC_017375.1 COG: COG2189; Pfam: PF01555; InterPro: IPR002941; type III restriction enzyme M protein 39969 12364818 HMPREF0462_0039 Helicobacter pylori 83 type III restriction enzyme M protein YP_005784606.1 39559 R 585538 CDS YP_005784607.1 385224682 12364819 complement(39982..40983) 1 NC_017375.1 type III restriction enzyme M protein 40983 12364819 HMPREF0462_0040 Helicobacter pylori 83 type III restriction enzyme M protein YP_005784607.1 39982 R 585538 CDS YP_005784608.1 385224683 12364820 41053..41694 1 NC_017375.1 COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789; response regulator 41694 12364820 HMPREF0462_0041 Helicobacter pylori 83 response regulator YP_005784608.1 41053 D 585538 CDS YP_005784609.1 385224684 12364821 41729..42862 1 NC_017375.1 COG: COG0642; Pfam: PF00512,PF02518; InterPro: IPR003594; signal-transducing protein 42862 12364821 HMPREF0462_0042 Helicobacter pylori 83 signal-transducing protein YP_005784609.1 41729 D 585538 CDS YP_005784610.1 385224685 12364822 42865..44259 1 NC_017375.1 COG: COG0063; Pfam: PF03853,PF01256; InterPro: IPR000631; sugar kinase 44259 12364822 HMPREF0462_0043 Helicobacter pylori 83 sugar kinase YP_005784610.1 42865 D 585538 CDS YP_005784611.1 385224686 12364823 44270..45736 1 NC_017375.1 COG: COG0305; Pfam: PF00772,PF03796; InterPro: IPR007692; replicative DNA helicase DnaB 45736 dnaB 12364823 dnaB Helicobacter pylori 83 replicative DNA helicase DnaB YP_005784611.1 44270 D 585538 CDS YP_005784612.1 385224687 12364824 45733..47046 1 NC_017375.1 COG: COG0658; Pfam: PF03772; InterPro: IPR004477; competence locus E 47046 comE 12364824 comE Helicobacter pylori 83 competence locus E YP_005784612.1 45733 D 585538 CDS YP_005784613.1 385224688 12364825 47075..47959 1 NC_017375.1 COG: COG0382; Pfam: PF01040; InterPro: IPR006371; prenyltransferase 47959 ubiA 12364825 ubiA Helicobacter pylori 83 prenyltransferase YP_005784613.1 47075 D 585538 CDS YP_005784614.1 385224689 12364826 47952..48446 1 NC_017375.1 hypothetical protein 48446 12364826 HMPREF0462_0047 Helicobacter pylori 83 hypothetical protein YP_005784614.1 47952 D 585538 CDS YP_005784615.1 385224690 12364827 48459..48962 1 NC_017375.1 hypothetical protein 48962 12364827 HMPREF0462_0048 Helicobacter pylori 83 hypothetical protein YP_005784615.1 48459 D 585538 CDS YP_005784616.1 385224691 12364828 48959..49762 1 NC_017375.1 COG: COG0688; Pfam: PF02666; InterPro: IPR005221; phosphatidylserine decarboxylase 49762 psd 12364828 psd Helicobacter pylori 83 phosphatidylserine decarboxylase YP_005784616.1 48959 D 585538 CDS YP_005784617.1 385224692 12364829 49752..50762 1 NC_017375.1 COG: COG0379; Pfam: PF02445; InterPro: IPR003473; quinolinate synthetase 50762 nadA 12364829 nadA Helicobacter pylori 83 quinolinate synthetase YP_005784617.1 49752 D 585538 CDS YP_005784618.1 385224693 12364830 50762..51583 1 NC_017375.1 COG: COG0157; Pfam: PF02749,PF01729; InterPro: IPR004393; nicotinate-nucleotide diphosphorylase 51583 nadC 12364830 nadC Helicobacter pylori 83 nicotinate-nucleotide diphosphorylase YP_005784618.1 50762 D 585538 CDS YP_005784619.1 385224694 12364831 51607..54138 1 NC_017375.1 adenine specific DNA methyltransferase 54138 12364831 HMPREF0462_0052 Helicobacter pylori 83 adenine specific DNA methyltransferase YP_005784619.1 51607 D 585538 CDS YP_005784620.1 385224695 12364832 54231..55199 1 NC_017375.1 adenine specific DNA methyltransferase 55199 12364832 HMPREF0462_0053 Helicobacter pylori 83 adenine specific DNA methyltransferase YP_005784620.1 54231 D 585538 CDS YP_005784621.1 385224696 12364833 55319..56398 1 NC_017375.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; modification methylase BabI 56398 babI 12364833 babI Helicobacter pylori 83 modification methylase BabI YP_005784621.1 55319 D 585538 CDS YP_005784622.1 385224697 12364834 56398..57291 1 NC_017375.1 type II restriction endonuclease 57291 12364834 HMPREF0462_0055 Helicobacter pylori 83 type II restriction endonuclease YP_005784622.1 56398 D 585538 CDS YP_005784623.1 385224698 12364835 57540..58904 1 NC_017375.1 COG: COG0793; Pfam: PF00595,PF03572; InterPro: IPR004447; carboxy-terminal processing protease CtpA 58904 ctpA 12364835 ctpA Helicobacter pylori 83 carboxy-terminal processing protease CtpA YP_005784623.1 57540 D 585538 CDS YP_005784624.1 385224699 12364836 58911..60086 1 NC_017375.1 hypothetical protein 60086 12364836 HMPREF0462_0057 Helicobacter pylori 83 hypothetical protein YP_005784624.1 58911 D 585538 CDS YP_005784625.1 385224700 12364837 60073..60789 1 NC_017375.1 COG: COG0204; Pfam: PF01553; InterPro: IPR002123; 1-acylglycerol-3-phosphate O-acyltransferase 60789 plsC 12364837 plsC Helicobacter pylori 83 1-acylglycerol-3-phosphate O-acyltransferase YP_005784625.1 60073 D 585538 CDS YP_005784626.1 385224701 12364838 60786..61487 1 NC_017375.1 COG: COG0692; Pfam: PF03167; InterPro: IPR005122; uracil-DNA glycosylase 61487 ung 12364838 ung Helicobacter pylori 83 uracil-DNA glycosylase YP_005784626.1 60786 D 585538 CDS YP_005784627.1 385224702 12364839 61576..62568 1 NC_017375.1 COG: COG0057; Pfam: PF00044,PF02800; InterPro: IPR000173; glyceraldehyde-3-phosphate dehydrogenase 62568 gap 12364839 gap Helicobacter pylori 83 glyceraldehyde-3-phosphate dehydrogenase YP_005784627.1 61576 D 585538 CDS YP_005784628.1 385224703 12364840 62584..63792 1 NC_017375.1 COG: COG0126; Pfam: PF00162; InterPro: IPR001576; phosphoglycerate kinase 63792 pgk 12364840 pgk Helicobacter pylori 83 phosphoglycerate kinase YP_005784628.1 62584 D 585538 CDS YP_005784629.1 385224704 12364841 63808..64770 1 NC_017375.1 COG: COG0598; Pfam: PF01544; InterPro: IPR004488; MIT family metal ion transporter CorA 64770 corA 12364841 corA Helicobacter pylori 83 MIT family metal ion transporter CorA YP_005784629.1 63808 D 585538 CDS YP_005784630.1 385224705 12364842 64777..65505 1 NC_017375.1 COG: COG0861; Pfam: PF03741; InterPro: IPR005496; membrane protein TerC 65505 12364842 HMPREF0462_0063 Helicobacter pylori 83 membrane protein TerC YP_005784630.1 64777 D 585538 CDS YP_005784631.1 385224706 12364843 complement(65824..66522) 1 NC_017375.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; site-specific DNA-methyltransferase (adenine-specific) 66522 mboIBM 12364843 mboIBM Helicobacter pylori 83 site-specific DNA-methyltransferase (adenine-specific) YP_005784631.1 65824 R 585538 CDS YP_005784632.1 385224707 12364844 complement(66519..67364) 1 NC_017375.1 COG: COG0270; Pfam: PF00145; InterPro: IPR001525; DNA (cytosine-5-)-methyltransferase 67364 ddeIM 12364844 ddeIM Helicobacter pylori 83 DNA (cytosine-5-)-methyltransferase YP_005784632.1 66519 R 585538 CDS YP_005784633.1 385224708 12364845 complement(67438..68937) 1 NC_017375.1 COG: COG0591; Pfam: PF00474; InterPro: IPR011851; SSS family proline:sodium (Na+) symporter 68937 putP 12364845 putP Helicobacter pylori 83 SSS family proline:sodium (Na+) symporter YP_005784633.1 67438 R 585538 CDS YP_005784634.1 385224709 12364846 complement(68964..72521) 1 NC_017375.1 COG: COG1012; Pfam: PF01619,PF00171; InterPro: IPR015590; proline/pyrroline-5-carboxylate dehydrogenase 72521 12364846 HMPREF0462_0067 Helicobacter pylori 83 proline/pyrroline-5-carboxylate dehydrogenase YP_005784634.1 68964 R 585538 CDS YP_005784635.1 385224710 12364847 72839..73048 1 NC_017375.1 hypothetical protein 73048 12364847 HMPREF0462_0068 Helicobacter pylori 83 hypothetical protein YP_005784635.1 72839 D 585538 CDS YP_005784636.1 385224711 12364848 73583..74020 1 NC_017375.1 hypothetical protein 74020 12364848 HMPREF0462_0069 Helicobacter pylori 83 hypothetical protein YP_005784636.1 73583 D 585538 CDS YP_005784637.1 385224712 12364849 74022..74306 1 NC_017375.1 hypothetical protein 74306 12364849 HMPREF0462_0070 Helicobacter pylori 83 hypothetical protein YP_005784637.1 74022 D 585538 CDS YP_005784638.1 385224713 12364850 74334..74705 1 NC_017375.1 hypothetical protein 74705 12364850 HMPREF0462_0071 Helicobacter pylori 83 hypothetical protein YP_005784638.1 74334 D 585538 CDS YP_005784639.1 385224714 12364851 74717..76039 1 NC_017375.1 hypothetical protein 76039 12364851 HMPREF0462_0072 Helicobacter pylori 83 hypothetical protein YP_005784639.1 74717 D 585538 CDS YP_005784640.1 385224715 12364852 76036..76209 1 NC_017375.1 hypothetical protein 76209 12364852 HMPREF0462_0073 Helicobacter pylori 83 hypothetical protein YP_005784640.1 76036 D 585538 CDS YP_005784641.1 385224716 12364853 76234..76797 1 NC_017375.1 hypothetical protein 76797 12364853 HMPREF0462_0074 Helicobacter pylori 83 hypothetical protein YP_005784641.1 76234 D 585538 CDS YP_005784642.1 385224717 12364854 76799..77026 1 NC_017375.1 hypothetical protein 77026 12364854 HMPREF0462_0075 Helicobacter pylori 83 hypothetical protein YP_005784642.1 76799 D 585538 CDS YP_005784643.1 385224718 12364855 77142..77711 1 NC_017375.1 hypothetical protein 77711 12364855 HMPREF0462_0076 Helicobacter pylori 83 hypothetical protein YP_005784643.1 77142 D 585538 CDS YP_005784644.1 385224719 12364856 77727..77855 1 NC_017375.1 hypothetical protein 77855 12364856 HMPREF0462_0077 Helicobacter pylori 83 hypothetical protein YP_005784644.1 77727 D 585538 CDS YP_005784645.1 385224720 12364857 77997..78383 1 NC_017375.1 hypothetical protein 78383 12364857 HMPREF0462_0078 Helicobacter pylori 83 hypothetical protein YP_005784645.1 77997 D 585538 CDS YP_005784646.1 385224721 12364858 78358..79110 1 NC_017375.1 hypothetical protein 79110 12364858 HMPREF0462_0079 Helicobacter pylori 83 hypothetical protein YP_005784646.1 78358 D 585538 CDS YP_005784647.1 385224722 12364859 79123..80088 1 NC_017375.1 COG: COG0582; Pfam: PF00589; InterPro: IPR013762; integrase/recombinase 80088 xerD 12364859 xerD Helicobacter pylori 83 integrase/recombinase YP_005784647.1 79123 D 585538 CDS YP_005784648.1 385224723 12364860 complement(80504..81481) 1 NC_017375.1 Pfam: PF07804; hypothetical protein 81481 12364860 HMPREF0462_0081 Helicobacter pylori 83 hypothetical protein YP_005784648.1 80504 R 585538 CDS YP_005784649.1 385224724 12364861 81671..82441 1 NC_017375.1 hypothetical protein 82441 12364861 HMPREF0462_0082 Helicobacter pylori 83 hypothetical protein YP_005784649.1 81671 D 585538 CDS YP_005784650.1 385224725 12364862 complement(82463..83719) 1 NC_017375.1 hypothetical protein 83719 12364862 HMPREF0462_0083 Helicobacter pylori 83 hypothetical protein YP_005784650.1 82463 R 585538 CDS YP_005784651.1 385224726 12364863 complement(83716..84966) 1 NC_017375.1 hypothetical protein 84966 12364863 HMPREF0462_0084 Helicobacter pylori 83 hypothetical protein YP_005784651.1 83716 R 585538 CDS YP_005784652.1 385224727 12364864 complement(84963..85616) 1 NC_017375.1 hypothetical protein 85616 12364864 HMPREF0462_0085 Helicobacter pylori 83 hypothetical protein YP_005784652.1 84963 R 585538 CDS YP_005784653.1 385224728 12364865 complement(85843..86001) 1 NC_017375.1 hypothetical protein 86001 12364865 HMPREF0462_0086 Helicobacter pylori 83 hypothetical protein YP_005784653.1 85843 R 585538 CDS YP_005784654.1 385224729 12364866 complement(86011..88080) 1 NC_017375.1 hypothetical protein 88080 12364866 HMPREF0462_0087 Helicobacter pylori 83 hypothetical protein YP_005784654.1 86011 R 585538 CDS YP_005784655.1 385224730 12364867 complement(88080..89147) 1 NC_017375.1 hypothetical protein 89147 12364867 HMPREF0462_0088 Helicobacter pylori 83 hypothetical protein YP_005784655.1 88080 R 585538 CDS YP_005784656.1 385224731 12364868 complement(89148..89312) 1 NC_017375.1 hypothetical protein 89312 12364868 HMPREF0462_0089 Helicobacter pylori 83 hypothetical protein YP_005784656.1 89148 R 585538 CDS YP_005784657.1 385224732 12364869 89946..90623 1 NC_017375.1 COG: COG1192; Pfam: PF01656; InterPro: IPR002586; PARA protein 90623 12364869 HMPREF0462_0090 Helicobacter pylori 83 PARA protein YP_005784657.1 89946 D 585538 CDS YP_005784658.1 385224733 12364870 90605..91042 1 NC_017375.1 hypothetical protein 91042 12364870 HMPREF0462_0091 Helicobacter pylori 83 hypothetical protein YP_005784658.1 90605 D 585538 CDS YP_005784659.1 385224734 12364871 91020..91592 1 NC_017375.1 hypothetical protein 91592 12364871 HMPREF0462_0092 Helicobacter pylori 83 hypothetical protein YP_005784659.1 91020 D 585538 CDS YP_005784660.1 385224735 12364872 complement(91714..92514) 1 NC_017375.1 Pfam: PF08843; InterPro: IPR014942; hypothetical protein 92514 12364872 HMPREF0462_0093 Helicobacter pylori 83 hypothetical protein YP_005784660.1 91714 R 585538 CDS YP_005784661.1 385224736 12364873 complement(92484..92969) 1 NC_017375.1 hypothetical protein 92969 12364873 HMPREF0462_0094 Helicobacter pylori 83 hypothetical protein YP_005784661.1 92484 R 585538 CDS YP_005784662.1 385224737 12364874 complement(93009..93227) 1 NC_017375.1 topoisomerase I 93227 topA 12364874 topA Helicobacter pylori 83 topoisomerase I YP_005784662.1 93009 R 585538 CDS YP_005784663.1 385224738 12364875 complement(93294..93740) 1 NC_017375.1 COG: COG1943; Pfam: PF01797; InterPro: IPR002686; transposase 93740 tnpA 12364875 tnpA Helicobacter pylori 83 transposase YP_005784663.1 93294 R 585538 CDS YP_005784664.1 385224739 12364876 93792..94139 1 NC_017375.1 COG: COG0675; Pfam: PF01385; InterPro: IPR001959; transposase 94139 tnpB 12364876 tnpB Helicobacter pylori 83 transposase YP_005784664.1 93792 D 585538 CDS YP_005784665.1 385224740 12364877 94214..95074 1 NC_017375.1 COG: COG0675; Pfam: PF01385,PF07282; InterPro: IPR001959; transposase 95074 tnpB2 12364877 tnpB2 Helicobacter pylori 83 transposase YP_005784665.1 94214 D 585538 CDS YP_005784666.1 385224741 12364878 complement(95071..95715) 1 NC_017375.1 Pfam: PF01856; hypothetical protein 95715 12364878 HMPREF0462_0099 Helicobacter pylori 83 hypothetical protein YP_005784666.1 95071 R 585538 CDS YP_005784667.1 385224742 12364879 complement(95728..97572) 1 NC_017375.1 hypothetical protein 97572 12364879 HMPREF0462_0100 Helicobacter pylori 83 hypothetical protein YP_005784667.1 95728 R 585538 CDS YP_005784668.1 385224743 12364880 complement(97500..98015) 1 NC_017375.1 hypothetical protein 98015 12364880 HMPREF0462_0101 Helicobacter pylori 83 hypothetical protein YP_005784668.1 97500 R 585538 CDS YP_005784669.1 385224744 12364881 complement(97999..99201) 1 NC_017375.1 COG: COG2948; Pfam: PF03743; InterPro: IPR005498; conjugal transfer protein TrbI 99201 trbI 12364881 trbI Helicobacter pylori 83 conjugal transfer protein TrbI YP_005784669.1 97999 R 585538 CDS YP_005784670.1 385224745 12364882 complement(99198..99674) 1 NC_017375.1 COG: COG3504; Pfam: PF03524; competence factor transporter ComB 99674 comB 12364882 comB Helicobacter pylori 83 competence factor transporter ComB YP_005784670.1 99198 R 585538 CDS YP_005784671.1 385224746 12364883 complement(99770..100213) 1 NC_017375.1 hypothetical protein 100213 12364883 HMPREF0462_0104 Helicobacter pylori 83 hypothetical protein YP_005784671.1 99770 R 585538 CDS YP_005784672.1 385224747 12364884 complement(100233..100868) 1 NC_017375.1 hypothetical protein 100868 12364884 HMPREF0462_0105 Helicobacter pylori 83 hypothetical protein YP_005784672.1 100233 R 585538 CDS YP_005784673.1 385224748 12364885 complement(100865..101998) 1 NC_017375.1 COG: COG3736; Pfam: PF04335; InterPro: IPR007430; competence factor transporter ComB 101998 comB2 12364885 comB2 Helicobacter pylori 83 competence factor transporter ComB YP_005784673.1 100865 R 585538 CDS YP_005784674.1 385224749 12364886 complement(101991..102125) 1 NC_017375.1 VirB7 102125 12364886 HMPREF0462_0107 Helicobacter pylori 83 VirB7 YP_005784674.1 101991 R 585538 CDS YP_005784675.1 385224750 12364887 complement(102127..104703) 1 NC_017375.1 COG: COG3451; Pfam: PF03135; InterPro: IPR004346; virB4-like protein 104703 12364887 HMPREF0462_0108 Helicobacter pylori 83 virB4-like protein YP_005784675.1 102127 R 585538 CDS YP_005784676.1 385224751 12364888 complement(104703..104957) 1 NC_017375.1 hypothetical protein 104957 12364888 HMPREF0462_0109 Helicobacter pylori 83 hypothetical protein YP_005784676.1 104703 R 585538 CDS YP_005784677.1 385224752 12364889 complement(104950..105213) 1 NC_017375.1 hypothetical protein 105213 12364889 HMPREF0462_0110 Helicobacter pylori 83 hypothetical protein YP_005784677.1 104950 R 585538 CDS YP_005784678.1 385224753 12364890 complement(105224..105508) 1 NC_017375.1 conjugal transfer protein TrbC 105508 12364890 HMPREF0462_0111 Helicobacter pylori 83 conjugal transfer protein TrbC YP_005784678.1 105224 R 585538 CDS YP_005784679.1 385224754 12364891 complement(105505..106059) 1 NC_017375.1 hypothetical protein 106059 12364891 HMPREF0462_0112 Helicobacter pylori 83 hypothetical protein YP_005784679.1 105505 R 585538 CDS YP_005784680.1 385224755 12364892 complement(106088..106672) 1 NC_017375.1 hypothetical protein 106672 12364892 HMPREF0462_0113 Helicobacter pylori 83 hypothetical protein YP_005784680.1 106088 R 585538 CDS YP_005784681.1 385224756 12364893 complement(106675..106875) 1 NC_017375.1 hypothetical protein 106875 12364893 HMPREF0462_0114 Helicobacter pylori 83 hypothetical protein YP_005784681.1 106675 R 585538 CDS YP_005784682.1 385224757 12364894 107099..107449 1 NC_017375.1 hypothetical protein 107449 12364894 HMPREF0462_0115 Helicobacter pylori 83 hypothetical protein YP_005784682.1 107099 D 585538 CDS YP_005784683.1 385224758 12364895 107446..109722 1 NC_017375.1 COG: COG1674; Pfam: PF01580; InterPro: IPR002543; ATP-binding protein 109722 12364895 HMPREF0462_0116 Helicobacter pylori 83 ATP-binding protein YP_005784683.1 107446 D 585538 CDS YP_005784684.1 385224759 12364896 109752..109871 1 NC_017375.1 hypothetical protein 109871 12364896 HMPREF0462_0117 Helicobacter pylori 83 hypothetical protein YP_005784684.1 109752 D 585538 CDS YP_005784685.1 385224760 12364897 complement(109928..110725) 1 NC_017375.1 COG: COG0829; Pfam: PF01774; InterPro: IPR002669; urease accessory protein UreD 110725 ureD 12364897 ureD Helicobacter pylori 83 urease accessory protein UreD YP_005784685.1 109928 R 585538 CDS YP_005784686.1 385224761 12364898 complement(110725..111324) 1 NC_017375.1 COG: COG0378; Pfam: PF02492; InterPro: IPR004400; urease accessory protein UreG 111324 ureG 12364898 ureG Helicobacter pylori 83 urease accessory protein UreG YP_005784686.1 110725 R 585538 CDS YP_005784687.1 385224762 12364899 complement(111353..112123) 1 NC_017375.1 COG: COG0830; Pfam: PF01730; InterPro: IPR002639; urease accessory protein UreF 112123 ureF 12364899 ureF Helicobacter pylori 83 urease accessory protein UreF YP_005784687.1 111353 R 585538 CDS YP_005784688.1 385224763 12364900 complement(112136..112648) 1 NC_017375.1 COG: COG2371; Pfam: PF02814,PF05194; InterPro: IPR007864; urease accessory protein UreE 112648 ureE 12364900 ureE Helicobacter pylori 83 urease accessory protein UreE YP_005784688.1 112136 R 585538 CDS YP_005784689.1 385224764 12364901 complement(112650..113258) 1 NC_017375.1 Pfam: PF02293; InterPro: IPR003211; urease accessory protein / pH-dependent urea-transporter 113258 ureI 12364901 ureI Helicobacter pylori 83 urease accessory protein / pH-dependent urea-transporter YP_005784689.1 112650 R 585538 CDS YP_005784690.1 385224765 12364902 complement(113430..115139) 1 NC_017375.1 COG: COG0804; Pfam: PF00449,PF01979; InterPro: IPR005848; urease alpha subunit 115139 ureC 12364902 ureC Helicobacter pylori 83 urease alpha subunit YP_005784690.1 113430 R 585538 CDS YP_005784691.1 385224766 12364903 complement(115143..115859) 1 NC_017375.1 COG: COG0832; Pfam: PF00547,PF00699; InterPro: IPR002019; urease subunit gamma 115859 ureA 12364903 ureA Helicobacter pylori 83 urease subunit gamma YP_005784691.1 115143 R 585538 CDS YP_005784692.1 385224767 12364905 complement(116220..116693) 1 NC_017375.1 COG: COG0597; Pfam: PF01252; InterPro: IPR001872; signal peptidase II 116693 lspA 12364905 lspA Helicobacter pylori 83 signal peptidase II YP_005784692.1 116220 R 585538 CDS YP_005784693.1 385224768 12364906 complement(116687..118024) 1 NC_017375.1 COG: COG1109; Pfam: PF02878,PF02879,PF02880,PF00408; InterPro: IPR006352; phosphoglucosamine mutase 118024 glmM 12364906 glmM Helicobacter pylori 83 phosphoglucosamine mutase YP_005784693.1 116687 R 585538 CDS YP_005784694.1 385224769 12364907 118114..118383 1 NC_017375.1 COG: COG0268; Pfam: PF01649; InterPro: IPR002583; 30S ribosomal protein S20 118383 rpsT 12364907 rpsT Helicobacter pylori 83 30S ribosomal protein S20 YP_005784694.1 118114 D 585538 CDS YP_005784695.1 385224770 12364908 118500..119558 1 NC_017375.1 COG: COG0216; Pfam: PF03462,PF00472; InterPro: IPR004373; peptide chain release factor RF1 119558 prfA 12364908 prfA Helicobacter pylori 83 peptide chain release factor RF1 YP_005784695.1 118500 D 585538 CDS YP_005784696.1 385224771 12364909 119975..120211 1 NC_017375.1 reminiscent outer membrane protein HorA 120211 12364909 HMPREF0462_0129 Helicobacter pylori 83 reminiscent outer membrane protein HorA YP_005784696.1 119975 D 585538 CDS YP_005784697.1 385224772 12364910 120222..120917 1 NC_017375.1 outer membrane protein HorA 120917 horA 12364910 horA Helicobacter pylori 83 outer membrane protein HorA YP_005784697.1 120222 D 585538 CDS YP_005784698.1 385224773 12364911 120904..121377 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 121377 12364911 HMPREF0462_0131 Helicobacter pylori 83 outer membrane protein YP_005784698.1 120904 D 585538 CDS YP_005784699.1 385224774 12364912 121773..123539 1 NC_017375.1 hypothetical protein 123539 12364912 HMPREF0462_0132 Helicobacter pylori 83 hypothetical protein YP_005784699.1 121773 D 585538 CDS YP_005784700.1 385224775 12364913 123818..123982 1 NC_017375.1 hypothetical protein 123982 12364913 HMPREF0462_0133 Helicobacter pylori 83 hypothetical protein YP_005784700.1 123818 D 585538 CDS YP_005784701.1 385224776 12364914 complement(123953..125974) 1 NC_017375.1 COG: COG0840; Pfam: PF00672,PF00015; InterPro: IPR004089; methyl-accepting chemotaxis protein 125974 tlpC 12364914 tlpC Helicobacter pylori 83 methyl-accepting chemotaxis protein YP_005784701.1 123953 R 585538 CDS YP_005784702.1 385224777 12364915 complement(126128..126517) 1 NC_017375.1 COG: COG0103; Pfam: PF00380; InterPro: IPR000754; 30S ribosomal protein S9 126517 rpsI 12364915 rpsI Helicobacter pylori 83 30S ribosomal protein S9 YP_005784702.1 126128 R 585538 CDS YP_005784703.1 385224778 12364916 complement(126514..126939) 1 NC_017375.1 COG: COG0102; Pfam: PF00572; InterPro: IPR005823; 50S ribosomal protein L13 126939 rplM 12364916 rplM Helicobacter pylori 83 50S ribosomal protein L13 YP_005784703.1 126514 R 585538 CDS YP_005784704.1 385224779 12364917 complement(127065..127232) 1 NC_017375.1 hypothetical protein 127232 12364917 HMPREF0462_0137 Helicobacter pylori 83 hypothetical protein YP_005784704.1 127065 R 585538 CDS YP_005784705.1 385224780 12364918 complement(127249..127437) 1 NC_017375.1 hypothetical protein 127437 12364918 HMPREF0462_0138 Helicobacter pylori 83 hypothetical protein YP_005784705.1 127249 R 585538 CDS YP_005784706.1 385224781 12364919 complement(127444..128796) 1 NC_017375.1 COG: COG0579; Pfam: PF01266; malate dehydrogenase (acceptor) 128796 mdh 12364919 mdh Helicobacter pylori 83 malate dehydrogenase (acceptor) YP_005784706.1 127444 R 585538 CDS YP_005784707.1 385224782 12364920 complement(128850..130226) 1 NC_017375.1 COG: COG0791; Pfam: PF00877; InterPro: IPR000064; hypothetical protein 130226 12364920 HMPREF0462_0140 Helicobacter pylori 83 hypothetical protein YP_005784707.1 128850 R 585538 CDS YP_005784708.1 385224783 12364921 complement(130247..132271) 1 NC_017375.1 COG: COG0568; Pfam: PF00140,PF04542,PF04539,PF04545; InterPro: IPR012760; DNA-directed RNA polymerase sigma subunit RpoD 132271 rpoD 12364921 rpoD Helicobacter pylori 83 DNA-directed RNA polymerase sigma subunit RpoD YP_005784708.1 130247 R 585538 CDS YP_005784709.1 385224784 12364922 complement(132455..133168) 1 NC_017375.1 COG: COG0775; Pfam: PF01048; InterPro: IPR000845; MTA/SAH nucleosidase 133168 mtnN 12364922 mtnN Helicobacter pylori 83 MTA/SAH nucleosidase YP_005784709.1 132455 R 585538 CDS YP_005784710.1 385224785 12364923 complement(133161..134090) 1 NC_017375.1 COG: COG0331; Pfam: PF00698; InterPro: IPR001227; malonyl-CoA-[acyl-carrier-protein] transacylase 134090 fabD 12364923 fabD Helicobacter pylori 83 malonyl-CoA-[acyl-carrier-protein] transacylase YP_005784710.1 133161 R 585538 CDS YP_005784711.1 385224786 12364925 134530..135135 1 NC_017375.1 Pfam: PF04373; InterPro: IPR007468; HrgA protein 135135 12364925 HMPREF0462_0144 Helicobacter pylori 83 HrgA protein YP_005784711.1 134530 D 585538 CDS YP_005784712.1 385224787 12364926 135156..135557 1 NC_017375.1 Pfam: PF04373; InterPro: IPR007468; HrgA protein 135557 12364926 HMPREF0462_0145 Helicobacter pylori 83 HrgA protein YP_005784712.1 135156 D 585538 CDS YP_005784713.1 385224788 12364927 135523..136344 1 NC_017375.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 136344 ccrM 12364927 ccrM Helicobacter pylori 83 DNA (cytosine-5-)-methyltransferase YP_005784713.1 135523 D 585538 CDS YP_005784714.1 385224789 12364928 complement(136367..136807) 1 NC_017375.1 Pfam: PF01531; InterPro: IPR002516; alpha-1,2-fucosyltransferase 136807 12364928 HMPREF0462_0147 Helicobacter pylori 83 alpha-1,2-fucosyltransferase YP_005784714.1 136367 R 585538 CDS YP_005784715.1 385224790 12364929 complement(136804..137262) 1 NC_017375.1 alpha-1,2-fucosyltransferase 137262 12364929 HMPREF0462_0148 Helicobacter pylori 83 alpha-1,2-fucosyltransferase YP_005784715.1 136804 R 585538 CDS YP_005784716.1 385224791 12364930 complement(137374..137904) 1 NC_017375.1 hypothetical protein 137904 12364930 HMPREF0462_0149 Helicobacter pylori 83 hypothetical protein YP_005784716.1 137374 R 585538 CDS YP_005784717.1 385224792 12364931 137977..138921 1 NC_017375.1 COG: COG1052; Pfam: PF00389,PF02826; InterPro: IPR006139; glycerate dehydrogenase 138921 hprA 12364931 hprA Helicobacter pylori 83 glycerate dehydrogenase YP_005784717.1 137977 D 585538 CDS YP_005784718.1 385224793 12364932 complement(139279..139992) 1 NC_017375.1 hypothetical protein 139992 12364932 HMPREF0462_0151 Helicobacter pylori 83 hypothetical protein YP_005784718.1 139279 R 585538 CDS YP_005784719.1 385224794 12364933 complement(140098..141558) 1 NC_017375.1 COG: COG0498; Pfam: PF00291; InterPro: IPR004450; threonine synthase 141558 thrC 12364933 thrC Helicobacter pylori 83 threonine synthase YP_005784719.1 140098 R 585538 CDS YP_005784720.1 385224795 12364934 complement(141604..141747) 1 NC_017375.1 hypothetical protein 141747 12364934 HMPREF0462_0153 Helicobacter pylori 83 hypothetical protein YP_005784720.1 141604 R 585538 CDS YP_005784721.1 385224796 12364935 141762..143789 1 NC_017375.1 COG: COG0840; Pfam: PF00015; InterPro: IPR004089; methyl-accepting chemotaxis protein 143789 tlpA 12364935 tlpA Helicobacter pylori 83 methyl-accepting chemotaxis protein YP_005784721.1 141762 D 585538 CDS YP_005784722.1 385224797 12364936 143789..144895 1 NC_017375.1 COG: COG1636; Pfam: PF02677; InterPro: IPR003828; hypothetical protein 144895 12364936 HMPREF0462_0155 Helicobacter pylori 83 hypothetical protein YP_005784722.1 143789 D 585538 CDS YP_005784723.1 385224798 12364937 145029..145790 1 NC_017375.1 Pfam: PF01856; outer membrane protein 145790 12364937 HMPREF0462_0156 Helicobacter pylori 83 outer membrane protein YP_005784723.1 145029 D 585538 CDS YP_005784724.1 385224799 12364938 complement(145773..146555) 1 NC_017375.1 COG: COG0463; Pfam: PF00535; InterPro: IPR001173; glycosyl transferase family protein 146555 wbyL 12364938 wbyL Helicobacter pylori 83 glycosyl transferase family protein YP_005784724.1 145773 R 585538 CDS YP_005784725.1 385224800 12364939 complement(146586..148283) 1 NC_017375.1 Pfam: PF00672,PF00015; InterPro: IPR004089; methyl-accepting chemotaxis protein 148283 tlpB 12364939 tlpB Helicobacter pylori 83 methyl-accepting chemotaxis protein YP_005784725.1 146586 R 585538 CDS YP_005784726.1 385224801 12364940 complement(148490..150235) 1 NC_017375.1 COG: COG0737; Pfam: PF00149,PF02872; InterPro: IPR006179; phosphatase/nucleotidase 150235 cpdB 12364940 cpdB Helicobacter pylori 83 phosphatase/nucleotidase YP_005784726.1 148490 R 585538 CDS YP_005784727.1 385224802 12364941 complement(150384..150851) 1 NC_017375.1 COG: COG1854; Pfam: PF02664; InterPro: IPR003815; S-ribosylhomocysteinase 150851 luxS 12364941 luxS Helicobacter pylori 83 S-ribosylhomocysteinase YP_005784727.1 150384 R 585538 CDS YP_005784728.1 385224803 12364942 complement(150886..152028) 1 NC_017375.1 COG: COG0626; Pfam: PF01053; InterPro: IPR000277; cystathionine beta-lyase 152028 metC 12364942 metC Helicobacter pylori 83 cystathionine beta-lyase YP_005784728.1 150886 R 585538 CDS YP_005784729.1 385224804 12364943 complement(152049..152969) 1 NC_017375.1 COG: COG0031; Pfam: PF00291; InterPro: IPR001926; cysteine synthase A 152969 cysK 12364943 cysK Helicobacter pylori 83 cysteine synthase A YP_005784729.1 152049 R 585538 CDS YP_005784730.1 385224805 12364944 complement(153208..155070) 1 NC_017375.1 COG: COG0443; Pfam: PF00012; InterPro: IPR012725; chaperone DnaK 155070 dnaK 12364944 dnaK Helicobacter pylori 83 chaperone DnaK YP_005784730.1 153208 R 585538 CDS YP_005784731.1 385224806 12364945 complement(155101..155676) 1 NC_017375.1 COG: COG0576; Pfam: PF01025; InterPro: IPR000740; co-chaperone GrpE 155676 grpE 12364945 grpE Helicobacter pylori 83 co-chaperone GrpE YP_005784731.1 155101 R 585538 CDS YP_005784732.1 385224807 12364946 complement(155676..156506) 1 NC_017375.1 COG: COG1420; InterPro: IPR011991; heat-inducible transcription repressor HrcA 156506 12364946 HMPREF0462_0165 Helicobacter pylori 83 heat-inducible transcription repressor HrcA YP_005784732.1 155676 R 585538 CDS YP_005784733.1 385224808 12364947 156726..157364 1 NC_017375.1 COG: COG0235; Pfam: PF00596; InterPro: IPR001303; L-fuculose phosphate aldolase 157364 12364947 HMPREF0462_0166 Helicobacter pylori 83 L-fuculose phosphate aldolase YP_005784733.1 156726 D 585538 CDS YP_005784734.1 385224809 12364948 157385..157681 1 NC_017375.1 hypothetical protein 157681 12364948 HMPREF0462_0167 Helicobacter pylori 83 hypothetical protein YP_005784734.1 157385 D 585538 CDS YP_005784735.1 385224810 12364949 complement(157708..159594) 1 NC_017375.1 COG: COG2604; Pfam: PF01973; InterPro: IPR002826; motility accessory factor 159594 maf 12364949 maf Helicobacter pylori 83 motility accessory factor YP_005784735.1 157708 R 585538 CDS YP_005784736.1 385224811 12364950 complement(159654..161198) 1 NC_017375.1 COG: COG1344; Pfam: PF00669,PF07196,PF00700; InterPro: IPR001492; flagellin B 161198 12364950 HMPREF0462_0169 Helicobacter pylori 83 flagellin B YP_005784736.1 159654 R 585538 CDS YP_005784737.1 385224812 12364951 161364..163574 1 NC_017375.1 COG: COG0550; Pfam: PF01751,PF01131,PF01396; InterPro: IPR005733; DNA topoisomerase TopA 163574 topA2 12364951 topA2 Helicobacter pylori 83 DNA topoisomerase TopA YP_005784737.1 161364 D 585538 CDS YP_005784738.1 385224813 12364952 163564..164493 1 NC_017375.1 COG: COG0731; Pfam: PF04055; radical SAM domain-containing protein 164493 12364952 HMPREF0462_0171 Helicobacter pylori 83 radical SAM domain-containing protein YP_005784738.1 163564 D 585538 CDS YP_005784739.1 385224814 12364953 complement(164591..165751) 1 NC_017375.1 Pfam: PF05917; InterPro: IPR008592; hypothetical protein 165751 12364953 HMPREF0462_0172 Helicobacter pylori 83 hypothetical protein YP_005784739.1 164591 R 585538 CDS YP_005784740.1 385224815 12364954 complement(166030..167217) 1 NC_017375.1 Pfam: PF05917; InterPro: IPR008592; hypothetical protein 167217 12364954 HMPREF0462_0173 Helicobacter pylori 83 hypothetical protein YP_005784740.1 166030 R 585538 CDS YP_005784741.1 385224816 12364955 complement(167316..169754) 1 NC_017375.1 COG: COG0574; Pfam: PF01326,PF00391,PF02896; InterPro: IPR006319; phosphoenolpyruvate synthase 169754 ppsA 12364955 ppsA Helicobacter pylori 83 phosphoenolpyruvate synthase YP_005784741.1 167316 R 585538 CDS YP_005784742.1 385224817 12364956 170116..171954 1 NC_017375.1 COG: COG0441; Pfam: PF07973,PF00587,PF03129; InterPro: IPR002320; threonine--tRNA ligase 171954 thrS 12364956 thrS Helicobacter pylori 83 threonine--tRNA ligase YP_005784742.1 170116 D 585538 CDS YP_005784743.1 385224818 12364957 171951..172562 1 NC_017375.1 COG: COG0290; Pfam: PF05198,PF00707; InterPro: IPR001288; translation initiation factor IF3 172562 infC 12364957 infC Helicobacter pylori 83 translation initiation factor IF3 YP_005784743.1 171951 D 585538 CDS YP_005784744.1 385224819 12364958 172543..172737 1 NC_017375.1 COG: COG0291; Pfam: PF01632; InterPro: IPR001706; 50S ribosomal protein L35 172737 rpmI 12364958 rpmI Helicobacter pylori 83 50S ribosomal protein L35 YP_005784744.1 172543 D 585538 CDS YP_005784745.1 385224820 12364959 172832..173182 1 NC_017375.1 COG: COG0292; Pfam: PF00453; InterPro: IPR005813; 50S ribosomal protein L20 173182 rplT 12364959 rplT Helicobacter pylori 83 50S ribosomal protein L20 YP_005784745.1 172832 D 585538 CDS YP_005784746.1 385224821 12364960 173382..174242 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 174242 12364960 HMPREF0462_0179 Helicobacter pylori 83 outer membrane protein YP_005784746.1 173382 D 585538 CDS YP_005784747.1 385224822 12364961 174294..174419 1 NC_017375.1 hypothetical protein 174419 12364961 HMPREF0462_0180 Helicobacter pylori 83 hypothetical protein YP_005784747.1 174294 D 585538 CDS YP_005784748.1 385224823 12364962 174597..175028 1 NC_017375.1 Pfam: PF06518; InterPro: IPR009488; hypothetical protein 175028 12364962 HMPREF0462_0181 Helicobacter pylori 83 hypothetical protein YP_005784748.1 174597 D 585538 CDS YP_005784749.1 385224824 12364963 175175..175342 1 NC_017375.1 hypothetical protein 175342 12364963 HMPREF0462_0182 Helicobacter pylori 83 hypothetical protein YP_005784749.1 175175 D 585538 CDS YP_005784750.1 385224825 12364964 175434..176303 1 NC_017375.1 hypothetical protein 176303 12364964 HMPREF0462_0183 Helicobacter pylori 83 hypothetical protein YP_005784750.1 175434 D 585538 CDS YP_005784751.1 385224826 12364965 176517..176636 1 NC_017375.1 hypothetical protein 176636 12364965 HMPREF0462_0184 Helicobacter pylori 83 hypothetical protein YP_005784751.1 176517 D 585538 CDS YP_005784752.1 385224827 12364966 176714..176920 1 NC_017375.1 hypothetical protein 176920 12364966 HMPREF0462_0185 Helicobacter pylori 83 hypothetical protein YP_005784752.1 176714 D 585538 CDS YP_005784753.1 385224828 12364967 complement(177165..178532) 1 NC_017375.1 COG: COG1760; Pfam: PF03315,PF03313; InterPro: IPR004644; L-serine ammonia-lyase 178532 sdaA 12364967 sdaA Helicobacter pylori 83 L-serine ammonia-lyase YP_005784753.1 177165 R 585538 CDS YP_005784754.1 385224829 12364968 complement(178532..179773) 1 NC_017375.1 COG: COG0814; Pfam: PF01490; InterPro: IPR004694; HAAAP family serine/threonine permease 179773 sdaC 12364968 sdaC Helicobacter pylori 83 HAAAP family serine/threonine permease YP_005784754.1 178532 R 585538 CDS YP_005784755.1 385224830 12364969 179945..181303 1 NC_017375.1 COG: COG3200; Pfam: PF01474; InterPro: IPR002480; phospho-2-dehydro-3-deoxyheptonate aldolase 181303 aroF 12364969 aroF Helicobacter pylori 83 phospho-2-dehydro-3-deoxyheptonate aldolase YP_005784755.1 179945 D 585538 CDS YP_005784756.1 385224831 12364970 181382..181516 1 NC_017375.1 hypothetical protein 181516 12364970 HMPREF0462_0189 Helicobacter pylori 83 hypothetical protein YP_005784756.1 181382 D 585538 CDS YP_005784757.1 385224832 12364971 complement(181746..182204) 1 NC_017375.1 COG: COG1225; Pfam: PF00578; InterPro: IPR012335; bacterioferritin comigratory protein 182204 bcp 12364971 bcp Helicobacter pylori 83 bacterioferritin comigratory protein YP_005784757.1 181746 R 585538 CDS YP_005784758.1 385224833 12364972 complement(182214..182849) 1 NC_017375.1 COG: COG1556; Pfam: PF02589; InterPro: IPR003741; hypothetical protein 182849 12364972 HMPREF0462_0191 Helicobacter pylori 83 hypothetical protein YP_005784758.1 182214 R 585538 CDS YP_005784759.1 385224834 12364973 complement(182842..184287) 1 NC_017375.1 COG: COG1139; Pfam: PF02589,PF00037; InterPro: IPR004452; iron-sulfur cluster-binding protein 184287 12364973 HMPREF0462_0192 Helicobacter pylori 83 iron-sulfur cluster-binding protein YP_005784759.1 182842 R 585538 CDS YP_005784760.1 385224835 12364974 complement(184316..185080) 1 NC_017375.1 COG: COG0247; Pfam: PF02754; InterPro: IPR004017; hypothetical protein 185080 12364974 HMPREF0462_0193 Helicobacter pylori 83 hypothetical protein YP_005784760.1 184316 R 585538 CDS YP_005784761.1 385224836 12364975 185266..186915 1 NC_017375.1 COG: COG1620; Pfam: PF02652; InterPro: IPR003804; L-lactate permease 186915 lctP 12364975 lctP Helicobacter pylori 83 L-lactate permease YP_005784761.1 185266 D 585538 CDS YP_005784762.1 385224837 12364976 186963..188618 1 NC_017375.1 COG: COG1620; Pfam: PF02652; InterPro: IPR003804; L-lactate permease 188618 12364976 HMPREF0462_0195 Helicobacter pylori 83 L-lactate permease YP_005784762.1 186963 D 585538 CDS YP_005784763.1 385224838 12364977 complement(188642..189511) 1 NC_017375.1 COG: COG1194; Pfam: PF00730,PF00633; InterPro: IPR003265; A/G-specific adenine glycosylase 189511 mutY 12364977 mutY Helicobacter pylori 83 A/G-specific adenine glycosylase YP_005784763.1 188642 R 585538 CDS YP_005784764.1 385224839 12364978 complement(189629..191077) 1 NC_017375.1 COG: COG0471; Pfam: PF00939; InterPro: IPR001898; DASS family divalent anion:sodium (Na+) symporter 191077 citT 12364978 citT Helicobacter pylori 83 DASS family divalent anion:sodium (Na+) symporter YP_005784764.1 189629 R 585538 CDS YP_005784765.1 385224840 12364979 191247..192713 1 NC_017375.1 COG: COG3278; Pfam: PF00115; InterPro: IPR004677; cytochrome c oxidase 192713 ccoN 12364979 ccoN Helicobacter pylori 83 cytochrome c oxidase YP_005784765.1 191247 D 585538 CDS YP_005784766.1 385224841 12364980 192726..193424 1 NC_017375.1 COG: COG2993; Pfam: PF02433; InterPro: IPR003468; cytochrome c oxidase 193424 ccoO 12364980 ccoO Helicobacter pylori 83 cytochrome c oxidase YP_005784766.1 192726 D 585538 CDS YP_005784767.1 385224842 12364981 193432..193653 1 NC_017375.1 COG: COG4736; InterPro: IPR014107; cytochrome c oxidase 193653 12364981 HMPREF0462_0200 Helicobacter pylori 83 cytochrome c oxidase YP_005784767.1 193432 D 585538 CDS YP_005784768.1 385224843 12364982 193655..194533 1 NC_017375.1 COG: COG2010; Pfam: PF00034; InterPro: IPR004678; cytochrome c oxidase 194533 ccoP 12364982 ccoP Helicobacter pylori 83 cytochrome c oxidase YP_005784768.1 193655 D 585538 CDS YP_005784769.1 385224844 12364983 194544..194750 1 NC_017375.1 hypothetical protein 194750 12364983 HMPREF0462_0202 Helicobacter pylori 83 hypothetical protein YP_005784769.1 194544 D 585538 CDS YP_005784770.1 385224845 12364984 194851..195435 1 NC_017375.1 hypothetical protein 195435 12364984 HMPREF0462_0203 Helicobacter pylori 83 hypothetical protein YP_005784770.1 194851 D 585538 CDS YP_005784771.1 385224846 12364985 195447..196028 1 NC_017375.1 hypothetical protein 196028 12364985 HMPREF0462_0204 Helicobacter pylori 83 hypothetical protein YP_005784771.1 195447 D 585538 CDS YP_005784772.1 385224847 12364986 196116..196883 1 NC_017375.1 hypothetical protein 196883 12364986 HMPREF0462_0205 Helicobacter pylori 83 hypothetical protein YP_005784772.1 196116 D 585538 CDS YP_005784773.1 385224848 12364987 complement(196880..197851) 1 NC_017375.1 COG: COG2107; Pfam: PF02642; InterPro: IPR003794; hypothetical protein 197851 12364987 HMPREF0462_0206 Helicobacter pylori 83 hypothetical protein YP_005784773.1 196880 R 585538 CDS YP_005784774.1 385224849 12364988 197845..198888 1 NC_017375.1 COG: COG0468; Pfam: PF00154; InterPro: IPR013765; recombination protein A 198888 recA 12364988 recA Helicobacter pylori 83 recombination protein A YP_005784774.1 197845 D 585538 CDS YP_005784775.1 385224850 12364989 198900..200180 1 NC_017375.1 COG: COG0148; Pfam: PF03952,PF00113; InterPro: IPR000941; phosphopyruvate hydratase 200180 eno 12364989 eno Helicobacter pylori 83 phosphopyruvate hydratase YP_005784775.1 198900 D 585538 CDS YP_005784776.1 385224851 12364990 200173..200448 1 NC_017375.1 hypothetical protein 200448 12364990 HMPREF0462_0209 Helicobacter pylori 83 hypothetical protein YP_005784776.1 200173 D 585538 CDS YP_005784777.1 385224852 12364991 200459..201061 1 NC_017375.1 hypothetical protein 201061 12364991 HMPREF0462_0210 Helicobacter pylori 83 hypothetical protein YP_005784777.1 200459 D 585538 CDS YP_005784778.1 385224853 12364992 201066..201554 1 NC_017375.1 COG: COG0703; Pfam: PF01202; InterPro: IPR000623; shikimate kinase 201554 aroK 12364992 aroK Helicobacter pylori 83 shikimate kinase YP_005784778.1 201066 D 585538 CDS YP_005784779.1 385224854 12364993 201576..202532 1 NC_017375.1 Pfam: PF02743; general glycosylation pathway protein 202532 12364993 HMPREF0462_0212 Helicobacter pylori 83 general glycosylation pathway protein YP_005784779.1 201576 D 585538 CDS YP_005784780.1 385224855 12364994 complement(202529..203647) 1 NC_017375.1 COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide 1,2-glucosyltransferase 203647 rfaJ 12364994 rfaJ Helicobacter pylori 83 lipopolysaccharide 1,2-glucosyltransferase YP_005784780.1 202529 R 585538 CDS YP_005784781.1 385224856 12364995 203804..204721 1 NC_017375.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 204721 hcpD 12364995 hcpD Helicobacter pylori 83 beta-lactamase YP_005784781.1 203804 D 585538 CDS YP_005784782.1 385224857 12364996 complement(205490..206212) 1 NC_017375.1 COG: COG0217; Pfam: PF01709; InterPro: IPR002876; hypothetical protein 206212 12364996 HMPREF0462_0215 Helicobacter pylori 83 hypothetical protein YP_005784782.1 205490 R 585538 CDS YP_005784783.1 385224858 12364997 complement(206213..207184) 1 NC_017375.1 COG: COG0113; Pfam: PF00490; InterPro: IPR013785; porphobilinogen synthase 207184 hemB 12364997 hemB Helicobacter pylori 83 porphobilinogen synthase YP_005784783.1 206213 R 585538 CDS YP_005784784.1 385224859 12364998 complement(207207..208541) 1 NC_017375.1 COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003660; signal-transducing protein 208541 12364998 HMPREF0462_0217 Helicobacter pylori 83 signal-transducing protein YP_005784784.1 207207 R 585538 CDS YP_005784785.1 385224860 12364999 complement(208567..209244) 1 NC_017375.1 COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789; DNA-binding response regulator 209244 racR 12364999 racR Helicobacter pylori 83 DNA-binding response regulator YP_005784785.1 208567 R 585538 CDS YP_005784786.1 385224861 12365000 complement(209476..210000) 1 NC_017375.1 hypothetical protein 210000 12365000 HMPREF0462_0219 Helicobacter pylori 83 hypothetical protein YP_005784786.1 209476 R 585538 CDS YP_005784787.1 385224862 12365001 complement(209991..210254) 1 NC_017375.1 hypothetical protein 210254 12365001 HMPREF0462_0220 Helicobacter pylori 83 hypothetical protein YP_005784787.1 209991 R 585538 CDS YP_005784788.1 385224863 12365002 complement(210287..211567) 1 NC_017375.1 COG: COG0826; Pfam: PF01136; InterPro: IPR001539; HlyD family type I secretion membrane fusion protein 211567 prtC 12365002 prtC Helicobacter pylori 83 HlyD family type I secretion membrane fusion protein YP_005784788.1 210287 R 585538 CDS YP_005784789.1 385224864 12365003 complement(211570..212289) 1 NC_017375.1 hypothetical protein 212289 12365003 HMPREF0462_0222 Helicobacter pylori 83 hypothetical protein YP_005784789.1 211570 R 585538 CDS YP_005784790.1 385224865 12365004 complement(212360..213517) 1 NC_017375.1 COG: COG1186; Pfam: PF03462,PF00472; InterPro: IPR004374; peptide chain release factor RF2 213517 prfB 12365004 prfB Helicobacter pylori 83 peptide chain release factor RF2 YP_005784790.1 212360 R 585538 CDS YP_005784791.1 385224866 12365005 complement(213507..213794) 1 NC_017375.1 molybdopterin biosynthesis protein 213794 12365005 HMPREF0462_0224 Helicobacter pylori 83 molybdopterin biosynthesis protein YP_005784791.1 213507 R 585538 CDS YP_005784792.1 385224867 12365006 complement(213857..214066) 1 NC_017375.1 InterPro: IPR001453; molybdopterin biosynthesis protein 214066 12365006 HMPREF0462_0225 Helicobacter pylori 83 molybdopterin biosynthesis protein YP_005784792.1 213857 R 585538 CDS YP_005784793.1 385224868 12365007 complement(214108..214530) 1 NC_017375.1 COG: COG0303; Pfam: PF03453; InterPro: IPR005110; molybdopterin biosynthesis protein 214530 moeA 12365007 moeA Helicobacter pylori 83 molybdopterin biosynthesis protein YP_005784793.1 214108 R 585538 CDS YP_005784794.1 385224869 12365008 complement(214540..215307) 1 NC_017375.1 COG: COG1684; Pfam: PF01311; InterPro: IPR002010; flagellar biosynthetic protein FliR 215307 fliR 12365008 fliR Helicobacter pylori 83 flagellar biosynthetic protein FliR YP_005784794.1 214540 R 585538 CDS YP_005784795.1 385224870 12365009 complement(215301..216053) 1 NC_017375.1 Pfam: PF04401; InterPro: IPR007496; hypothetical protein 216053 12365009 HMPREF0462_0228 Helicobacter pylori 83 hypothetical protein YP_005784795.1 215301 R 585538 CDS YP_005784796.1 385224871 12365010 complement(216142..216330) 1 NC_017375.1 hypothetical protein 216330 12365010 HMPREF0462_0229 Helicobacter pylori 83 hypothetical protein YP_005784796.1 216142 R 585538 CDS YP_005784797.1 385224872 12365011 216508..217407 1 NC_017375.1 COG: COG0760; Pfam: PF00639; InterPro: IPR000297; cell binding factor 2 217407 12365011 HMPREF0462_0230 Helicobacter pylori 83 cell binding factor 2 YP_005784797.1 216508 D 585538 CDS YP_005784798.1 385224873 12365012 217424..218347 1 NC_017375.1 COG: COG0191; Pfam: PF01116; InterPro: IPR000771; fructose-1,6-bisphosphate aldolase 218347 fba 12365012 fba Helicobacter pylori 83 fructose-1,6-bisphosphate aldolase YP_005784798.1 217424 D 585538 CDS YP_005784799.1 385224874 12365013 218369..218932 1 NC_017375.1 COG: COG0231; Pfam: PF08207,PF01132,PF09285; InterPro: IPR011768; elongation factor P 218932 efp 12365013 efp Helicobacter pylori 83 elongation factor P YP_005784799.1 218369 D 585538 CDS YP_005784800.1 385224875 12365014 complement(219075..220103) 1 NC_017375.1 COG: COG2089; Pfam: PF03102,PF08666; InterPro: IPR013785; pseudaminic acid synthase 220103 pseI 12365014 pseI Helicobacter pylori 83 pseudaminic acid synthase YP_005784800.1 219075 R 585538 CDS YP_005784801.1 385224876 12365015 complement(220107..220748) 1 NC_017375.1 COG: COG1136; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein 220748 12365015 HMPREF0462_0234 Helicobacter pylori 83 ABC superfamily ATP binding cassette transporter, ABC protein YP_005784801.1 220107 R 585538 CDS YP_005784802.1 385224877 12365016 complement(220748..222022) 1 NC_017375.1 COG: COG0815; Pfam: PF00795; InterPro: IPR004563; apolipoprotein N-acyltransferase 222022 lnt 12365016 lnt Helicobacter pylori 83 apolipoprotein N-acyltransferase YP_005784802.1 220748 R 585538 CDS YP_005784803.1 385224878 12365017 222246..222953 1 NC_017375.1 COG: COG1286; Pfam: PF02674; InterPro: IPR003825; hypothetical protein 222953 12365017 HMPREF0462_0236 Helicobacter pylori 83 hypothetical protein YP_005784803.1 222246 D 585538 CDS YP_005784804.1 385224879 12365018 222963..224468 1 NC_017375.1 COG: COG1190; Pfam: PF01336,PF00152; InterPro: IPR002313; lysine--tRNA ligase 224468 lysS 12365018 lysS Helicobacter pylori 83 lysine--tRNA ligase YP_005784804.1 222963 D 585538 CDS YP_005784805.1 385224880 12365019 224468..225718 1 NC_017375.1 COG: COG0112; Pfam: PF00464; InterPro: IPR001085; glycine hydroxymethyltransferase 225718 glyA 12365019 glyA Helicobacter pylori 83 glycine hydroxymethyltransferase YP_005784805.1 224468 D 585538 CDS YP_005784806.1 385224881 12365020 225729..226271 1 NC_017375.1 Pfam: PF08966,PF01896; InterPro: IPR015061; DNA primase small subunit domain protein 226271 12365020 HMPREF0462_0239 Helicobacter pylori 83 DNA primase small subunit domain protein YP_005784806.1 225729 D 585538 CDS YP_005784807.1 385224882 12365021 226293..227102 1 NC_017375.1 hypothetical protein 227102 12365021 HMPREF0462_0240 Helicobacter pylori 83 hypothetical protein YP_005784807.1 226293 D 585538 CDS YP_005784808.1 385224883 12365022 complement(227457..228998) 1 NC_017375.1 COG: COG1479; Pfam: PF03235,PF07510; InterPro: IPR011089; hypothetical protein 228998 12365022 HMPREF0462_0241 Helicobacter pylori 83 hypothetical protein YP_005784808.1 227457 R 585538 CDS YP_005784809.1 385224884 12365023 229302..229835 1 NC_017375.1 COG: COG2862; Pfam: PF03350; InterPro: IPR005134; membrane protein 229835 12365023 HMPREF0462_0242 Helicobacter pylori 83 membrane protein YP_005784809.1 229302 D 585538 CDS YP_005784810.1 385224885 12365024 complement(229841..231349) 1 NC_017375.1 COG: COG1502; Pfam: PF00614; phospholipase D 231349 12365024 HMPREF0462_0243 Helicobacter pylori 83 phospholipase D YP_005784810.1 229841 R 585538 CDS YP_005784811.1 385224886 12365025 complement(231371..232108) 1 NC_017375.1 COG: COG0479; Pfam: PF00111,PF00037; InterPro: IPR004489; fumarate reductase subunit B 232108 frdB 12365025 frdB Helicobacter pylori 83 fumarate reductase subunit B YP_005784811.1 231371 R 585538 CDS YP_005784812.1 385224887 12365026 complement(232101..234245) 1 NC_017375.1 COG: COG1053; Pfam: PF00890,PF02910; InterPro: IPR014006; fumarate reductase subunit A 234245 frdA 12365026 frdA Helicobacter pylori 83 fumarate reductase subunit A YP_005784812.1 232101 R 585538 CDS YP_005784813.1 385224888 12365027 complement(234255..235022) 1 NC_017375.1 COG: COG2009; Pfam: PF02967; InterPro: IPR004224; fumarate reductase respiratory complex 235022 frdC 12365027 frdC Helicobacter pylori 83 fumarate reductase respiratory complex YP_005784813.1 234255 R 585538 CDS YP_005784814.1 385224889 12365028 235236..235940 1 NC_017375.1 COG: COG0149; Pfam: PF00121; InterPro: IPR013785; triose-phosphate isomerase 235940 tpiA 12365028 tpiA Helicobacter pylori 83 triose-phosphate isomerase YP_005784814.1 235236 D 585538 CDS YP_005784815.1 385224890 12365029 235950..236777 1 NC_017375.1 COG: COG0623; InterPro: IPR014358; enoyl-(acyl carrier protein) reductase 236777 fabI 12365029 fabI Helicobacter pylori 83 enoyl-(acyl carrier protein) reductase YP_005784815.1 235950 D 585538 CDS YP_005784816.1 385224891 12365030 236787..237797 1 NC_017375.1 COG: COG1044; Pfam: PF04613,PF00132; InterPro: IPR007691; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 237797 lpxD 12365030 lpxD Helicobacter pylori 83 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005784816.1 236787 D 585538 CDS YP_005784817.1 385224892 12365031 237862..239019 1 NC_017375.1 COG: COG0192; Pfam: PF00438,PF02772,PF02773; InterPro: IPR002133; methionine adenosyltransferase 239019 metK 12365031 metK Helicobacter pylori 83 methionine adenosyltransferase YP_005784817.1 237862 D 585538 CDS YP_005784818.1 385224893 12365032 239086..239499 1 NC_017375.1 COG: COG0105; Pfam: PF00334; InterPro: IPR001564; nucleoside diphosphate kinase 239499 ndk 12365032 ndk Helicobacter pylori 83 nucleoside diphosphate kinase YP_005784818.1 239086 D 585538 CDS YP_005784819.1 385224894 12365033 239524..239880 1 NC_017375.1 hypothetical protein 239880 12365033 HMPREF0462_0252 Helicobacter pylori 83 hypothetical protein YP_005784819.1 239524 D 585538 CDS YP_005784820.1 385224895 12365034 239896..240042 1 NC_017375.1 COG: COG0333; Pfam: PF01783; InterPro: IPR002677; 50S ribosomal protein L32 240042 rpmF 12365034 rpmF Helicobacter pylori 83 50S ribosomal protein L32 YP_005784820.1 239896 D 585538 CDS YP_005784821.1 385224896 12365035 240120..241139 1 NC_017375.1 COG: COG0416; Pfam: PF02504; InterPro: IPR003664; fatty acid/phospholipid synthesis protein PlsX 241139 plsX 12365035 plsX Helicobacter pylori 83 fatty acid/phospholipid synthesis protein PlsX YP_005784821.1 240120 D 585538 CDS YP_005784822.1 385224897 12365036 241164..242156 1 NC_017375.1 COG: COG0332; Pfam: PF08545,PF08541; InterPro: IPR004655; 3-oxoacyl-(acyl-carrier-protein) synthase III 242156 fabH 12365036 fabH Helicobacter pylori 83 3-oxoacyl-(acyl-carrier-protein) synthase III YP_005784822.1 241164 D 585538 CDS YP_005784823.1 385224898 12365037 242177..242479 1 NC_017375.1 hypothetical protein 242479 12365037 HMPREF0462_0256 Helicobacter pylori 83 hypothetical protein YP_005784823.1 242177 D 585538 CDS YP_005784824.1 385224899 12365038 complement(242770..243153) 1 NC_017375.1 hypothetical protein 243153 12365038 HMPREF0462_0257 Helicobacter pylori 83 hypothetical protein YP_005784824.1 242770 R 585538 CDS YP_005784825.1 385224900 12365039 complement(243214..243753) 1 NC_017375.1 hypothetical protein 243753 12365039 HMPREF0462_0258 Helicobacter pylori 83 hypothetical protein YP_005784825.1 243214 R 585538 CDS YP_005784826.1 385224901 12365040 complement(243830..245233) 1 NC_017375.1 hypothetical protein 245233 12365040 HMPREF0462_0259 Helicobacter pylori 83 hypothetical protein YP_005784826.1 243830 R 585538 CDS YP_005784827.1 385224902 12365041 complement(245465..246292) 1 NC_017375.1 hypothetical protein 246292 12365041 HMPREF0462_0260 Helicobacter pylori 83 hypothetical protein YP_005784827.1 245465 R 585538 CDS YP_005784828.1 385224903 12365042 246392..247498 1 NC_017375.1 COG: COG0489; Pfam: PF01883; InterPro: IPR002744; ATP/GTP-binding protein 247498 mrp 12365042 mrp Helicobacter pylori 83 ATP/GTP-binding protein YP_005784828.1 246392 D 585538 CDS YP_005784829.1 385224904 12365043 complement(247512..248531) 1 NC_017375.1 COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide biosynthesis protein 248531 rfaJ2 12365043 rfaJ2 Helicobacter pylori 83 lipopolysaccharide biosynthesis protein YP_005784829.1 247512 R 585538 CDS YP_005784830.1 385224905 12365044 complement(248555..248668) 1 NC_017375.1 Pfam: PF01501; lipopolysaccharide biosynthesis protein 248668 rfaJ3 12365044 rfaJ3 Helicobacter pylori 83 lipopolysaccharide biosynthesis protein YP_005784830.1 248555 R 585538 CDS YP_005784831.1 385224906 12365045 248783..250162 1 NC_017375.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 250162 hofE 12365045 hofE Helicobacter pylori 83 hof-family outer membrane protein YP_005784831.1 248783 D 585538 CDS YP_005784832.1 385224907 12365046 250235..252100 1 NC_017375.1 COG: COG0326; Pfam: PF02518,PF00183; InterPro: IPR001404; chaperone HtpG 252100 htpG 12365046 htpG Helicobacter pylori 83 chaperone HtpG YP_005784832.1 250235 D 585538 CDS YP_005784833.1 385224908 12365047 complement(252289..253041) 1 NC_017375.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 253041 hcpA 12365047 hcpA Helicobacter pylori 83 beta-lactamase YP_005784833.1 252289 R 585538 CDS YP_005784834.1 385224909 12365048 complement(253701..254918) 1 NC_017375.1 COG: COG0624; Pfam: PF01546,PF07687; InterPro: IPR005941; succinyl-diaminopimelate desuccinylase 254918 dapE 12365048 dapE Helicobacter pylori 83 succinyl-diaminopimelate desuccinylase YP_005784834.1 253701 R 585538 CDS YP_005784835.1 385224910 12365049 complement(254878..256743) 1 NC_017375.1 COG: COG0445; Pfam: PF01134; InterPro: IPR004416; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 256743 gidA 12365049 gidA Helicobacter pylori 83 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_005784835.1 254878 R 585538 CDS YP_005784836.1 385224911 12365050 256839..258497 1 NC_017375.1 COG: COG0471; Pfam: PF00939; InterPro: IPR001898; sodium-dependent transporter 258497 hunaDC 12365050 hunaDC Helicobacter pylori 83 sodium-dependent transporter YP_005784836.1 256839 D 585538 CDS YP_005784837.1 385224912 12365051 258518..259318 1 NC_017375.1 COG: COG0575; Pfam: PF01148; InterPro: IPR000374; phosphatidate cytidylyltransferase 259318 cdsA 12365051 cdsA Helicobacter pylori 83 phosphatidate cytidylyltransferase YP_005784837.1 258518 D 585538 CDS YP_005784838.1 385224913 12365052 259319..260425 1 NC_017375.1 COG: COG0743; Pfam: PF02670,PF08436; InterPro: IPR003821; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 260425 dxr 12365052 dxr Helicobacter pylori 83 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005784838.1 259319 D 585538 CDS YP_005784839.1 385224914 12365053 260477..261619 1 NC_017375.1 Pfam: PF06306; InterPro: IPR010446; beta-1,4-N-acetylgalactosamyltransferase 261619 12365053 HMPREF0462_0272 Helicobacter pylori 83 beta-1,4-N-acetylgalactosamyltransferase YP_005784839.1 260477 D 585538 CDS YP_005784840.1 385224915 12365054 complement(261634..262185) 1 NC_017375.1 COG: COG1881; Pfam: PF01161; InterPro: IPR008914; phospholipid-binding protein 262185 12365054 HMPREF0462_0273 Helicobacter pylori 83 phospholipid-binding protein YP_005784840.1 261634 R 585538 CDS YP_005784841.1 385224916 12365055 262335..262796 1 NC_017375.1 hypothetical protein 262796 12365055 HMPREF0462_0274 Helicobacter pylori 83 hypothetical protein YP_005784841.1 262335 D 585538 CDS YP_005784842.1 385224917 12365056 262969..264132 1 NC_017375.1 COG: COG1104; Pfam: PF00266; InterPro: IPR000192; NifS family cysteine desulfurase 264132 nifS 12365056 nifS Helicobacter pylori 83 NifS family cysteine desulfurase YP_005784842.1 262969 D 585538 CDS YP_005784843.1 385224918 12365057 264154..265134 1 NC_017375.1 Pfam: PF01592,PF04324,PF01106; InterPro: IPR002871; NifU family protein 265134 nifU 12365057 nifU Helicobacter pylori 83 NifU family protein YP_005784843.1 264154 D 585538 CDS YP_005784844.1 385224919 12365058 265291..265524 1 NC_017375.1 Pfam: PF01402; hypothetical protein 265524 12365058 HMPREF0462_0277 Helicobacter pylori 83 hypothetical protein YP_005784844.1 265291 D 585538 CDS YP_005784845.1 385224920 12365059 265611..266981 1 NC_017375.1 COG: COG1066; InterPro: IPR004504; DNA repair protein RadA 266981 12365059 HMPREF0462_0278 Helicobacter pylori 83 DNA repair protein RadA YP_005784845.1 265611 D 585538 CDS YP_005784846.1 385224921 12365060 267106..268185 1 NC_017375.1 COG: COG0225; Pfam: PF01625,PF01641; InterPro: IPR002569; methionine-S-sulfoxide reductase/methionine-R-sulfoxide reductase 268185 msrAB 12365060 msrAB Helicobacter pylori 83 methionine-S-sulfoxide reductase/methionine-R-sulfoxide reductase YP_005784846.1 267106 D 585538 CDS YP_005784847.1 385224922 12365061 complement(268814..269647) 1 NC_017375.1 COG: COG0730; Pfam: PF01925; InterPro: IPR002781; integral membrane protein 269647 12365061 HMPREF0462_0280 Helicobacter pylori 83 integral membrane protein YP_005784847.1 268814 R 585538 CDS YP_005784848.1 385224923 12365062 complement(269721..269879) 1 NC_017375.1 hypothetical protein 269879 12365062 HMPREF0462_0281 Helicobacter pylori 83 hypothetical protein YP_005784848.1 269721 R 585538 CDS YP_005784849.1 385224924 12365063 complement(269863..271770) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 271770 12365063 HMPREF0462_0282 Helicobacter pylori 83 outer membrane protein YP_005784849.1 269863 R 585538 CDS YP_005784850.1 385224925 12365065 complement(272146..273615) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 273615 12365065 HMPREF0462_0283 Helicobacter pylori 83 outer membrane protein YP_005784850.1 272146 R 585538 CDS YP_005784851.1 385224926 12365066 complement(273809..274534) 1 NC_017375.1 COG: COG1212; Pfam: PF02348; InterPro: IPR004528; 3-deoxy-D-manno-octulosonate cytidylyltransferase 274534 kdsB 12365066 kdsB Helicobacter pylori 83 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_005784851.1 273809 R 585538 CDS YP_005784852.1 385224927 12365067 274647..275444 1 NC_017375.1 COG: COG1651; disulfide isomerase 275444 12365067 HMPREF0462_0285 Helicobacter pylori 83 disulfide isomerase YP_005784852.1 274647 D 585538 CDS YP_005784853.1 385224928 12365068 275460..276113 1 NC_017375.1 secreted protein 276113 12365068 HMPREF0462_0286 Helicobacter pylori 83 secreted protein YP_005784853.1 275460 D 585538 CDS YP_005784854.1 385224929 12365069 276138..277310 1 NC_017375.1 COG: COG0754; Pfam: PF03738; InterPro: IPR005494; glutathionylspermidine synthase 277310 12365069 HMPREF0462_0287 Helicobacter pylori 83 glutathionylspermidine synthase YP_005784854.1 276138 D 585538 CDS YP_005784855.1 385224930 12365070 277310..277840 1 NC_017375.1 hypothetical protein 277840 12365070 HMPREF0462_0288 Helicobacter pylori 83 hypothetical protein YP_005784855.1 277310 D 585538 CDS YP_005784856.1 385224931 12365071 complement(278286..279353) 1 NC_017375.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 279353 hcpE 12365071 hcpE Helicobacter pylori 83 beta-lactamase YP_005784856.1 278286 R 585538 CDS YP_005784857.1 385224932 12365072 complement(279447..279818) 1 NC_017375.1 hypothetical protein 279818 12365072 HMPREF0462_0290 Helicobacter pylori 83 hypothetical protein YP_005784857.1 279447 R 585538 CDS YP_005784858.1 385224933 12365073 complement(279818..280738) 1 NC_017375.1 COG: COG0181; Pfam: PF01379,PF03900; InterPro: IPR000860; hydroxymethylbilane synthase 280738 hemC 12365073 hemC Helicobacter pylori 83 hydroxymethylbilane synthase YP_005784858.1 279818 R 585538 CDS YP_005784859.1 385224934 12365074 complement(280749..282482) 1 NC_017375.1 COG: COG0442; Pfam: PF00587,PF04073,PF03129; InterPro: IPR004500; proline--tRNA ligase 282482 proS 12365074 proS Helicobacter pylori 83 proline--tRNA ligase YP_005784859.1 280749 R 585538 CDS YP_005784860.1 385224935 12365075 complement(282486..283835) 1 NC_017375.1 COG: COG0373; Pfam: PF05201,PF01488,PF00745; InterPro: IPR000343; glutamyl-tRNA reductase 283835 hemA 12365075 hemA Helicobacter pylori 83 glutamyl-tRNA reductase YP_005784860.1 282486 R 585538 CDS YP_005784861.1 385224936 12365076 complement(283835..284758) 1 NC_017375.1 COG: COG0142; Pfam: PF00348; InterPro: IPR008949; polyprenyl synthetase 284758 ispB 12365076 ispB Helicobacter pylori 83 polyprenyl synthetase YP_005784861.1 283835 R 585538 CDS YP_005784862.1 385224937 12365077 complement(284768..285163) 1 NC_017375.1 hypothetical protein 285163 12365077 HMPREF0462_0295 Helicobacter pylori 83 hypothetical protein YP_005784862.1 284768 R 585538 CDS YP_005784863.1 385224938 12365078 complement(285156..285440) 1 NC_017375.1 hypothetical protein 285440 12365078 HMPREF0462_0296 Helicobacter pylori 83 hypothetical protein YP_005784863.1 285156 R 585538 CDS YP_005784864.1 385224939 12365079 complement(285461..285895) 1 NC_017375.1 COG: COG0783; Pfam: PF00210; InterPro: IPR012347; DNA starvation/stationary phase protection protein DpsA 285895 dps 12365079 dps Helicobacter pylori 83 DNA starvation/stationary phase protection protein DpsA YP_005784864.1 285461 R 585538 CDS YP_005784865.1 385224940 12365080 complement(286101..287246) 1 NC_017375.1 COG: COG0642; Pfam: PF00512,PF02518; InterPro: IPR003594; sensor histidine kinase 287246 atoS 12365080 atoS Helicobacter pylori 83 sensor histidine kinase YP_005784865.1 286101 R 585538 CDS YP_005784866.1 385224941 12365081 complement(287243..287560) 1 NC_017375.1 hypothetical protein 287560 12365081 HMPREF0462_0299 Helicobacter pylori 83 hypothetical protein YP_005784866.1 287243 R 585538 CDS YP_005784867.1 385224942 12365082 complement(287557..288585) 1 NC_017375.1 COG: COG1706; Pfam: PF02119; InterPro: IPR001782; flagellar P-ring protein FlgI 288585 flgI 12365082 flgI Helicobacter pylori 83 flagellar P-ring protein FlgI YP_005784867.1 287557 R 585538 CDS YP_005784868.1 385224943 12365083 288779..290257 1 NC_017375.1 COG: COG0513; Pfam: PF00270,PF00271; InterPro: IPR014001; ATP-dependent RNA helicase DeaD 290257 deaD 12365083 deaD Helicobacter pylori 83 ATP-dependent RNA helicase DeaD YP_005784868.1 288779 D 585538 CDS YP_005784869.1 385224944 12365084 290278..291366 1 NC_017375.1 COG: COG0330; Pfam: PF01145; InterPro: IPR001107; hypothetical protein 291366 12365084 HMPREF0462_0302 Helicobacter pylori 83 hypothetical protein YP_005784869.1 290278 D 585538 CDS YP_005784870.1 385224945 12365085 291373..291912 1 NC_017375.1 hypothetical protein 291912 12365085 HMPREF0462_0303 Helicobacter pylori 83 hypothetical protein YP_005784870.1 291373 D 585538 CDS YP_005784871.1 385224946 12365086 complement(291978..293528) 1 NC_017375.1 Pfam: PF00005,PF08352; InterPro: IPR003593; oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 293528 oppD 12365086 oppD Helicobacter pylori 83 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein YP_005784871.1 291978 R 585538 CDS YP_005784872.1 385224947 12365087 complement(293538..294560) 1 NC_017375.1 COG: COG4239; Pfam: PF00528; InterPro: IPR000515; oligopeptide ABC superfamily ATP binding cassette transporter, permease protein 294560 oppC 12365087 oppC Helicobacter pylori 83 oligopeptide ABC superfamily ATP binding cassette transporter, permease protein YP_005784872.1 293538 R 585538 CDS YP_005784873.1 385224948 12365089 294903..296348 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 296348 12365089 HMPREF0462_0306 Helicobacter pylori 83 outer membrane protein YP_005784873.1 294903 D 585538 CDS YP_005784874.1 385224949 12365090 296361..297779 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 297779 12365090 HMPREF0462_0307 Helicobacter pylori 83 outer membrane protein YP_005784874.1 296361 D 585538 CDS YP_005784875.1 385224950 12365091 297878..299113 1 NC_017375.1 COG: COG0104; Pfam: PF00709; InterPro: IPR001114; adenylosuccinate synthase 299113 purA 12365091 purA Helicobacter pylori 83 adenylosuccinate synthase YP_005784875.1 297878 D 585538 CDS YP_005784876.1 385224951 12365092 299110..299538 1 NC_017375.1 hypothetical protein 299538 12365092 HMPREF0462_0309 Helicobacter pylori 83 hypothetical protein YP_005784876.1 299110 D 585538 CDS YP_005784877.1 385224952 12365093 299531..300190 1 NC_017375.1 pdp protein 300190 pdp 12365093 pdp Helicobacter pylori 83 pdp protein YP_005784877.1 299531 D 585538 CDS YP_005784878.1 385224953 12365094 300187..301236 1 NC_017375.1 COG: COG0750; Pfam: PF02163; InterPro: IPR004387; RIP metalloprotease RseP 301236 rseP 12365094 rseP Helicobacter pylori 83 RIP metalloprotease RseP YP_005784878.1 300187 D 585538 CDS YP_005784879.1 385224954 12365095 301249..302523 1 NC_017375.1 COG: COG1570; Pfam: PF01336,PF02601; InterPro: IPR003753; exodeoxyribonuclease VII large subunit 302523 xseA 12365095 xseA Helicobacter pylori 83 exodeoxyribonuclease VII large subunit YP_005784879.1 301249 D 585538 CDS YP_005784880.1 385224955 12365096 complement(302520..303674) 1 NC_017375.1 COG: COG2189; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 303674 mod 12365096 mod Helicobacter pylori 83 DNA (cytosine-5-)-methyltransferase YP_005784880.1 302520 R 585538 CDS YP_005784881.1 385224956 12365097 complement(303685..303939) 1 NC_017375.1 hypothetical protein 303939 12365097 HMPREF0462_0314 Helicobacter pylori 83 hypothetical protein YP_005784881.1 303685 R 585538 CDS YP_005784882.1 385224957 12365098 304225..304938 1 NC_017375.1 endonuclease MjaVIP 304938 mjaVIP 12365098 mjaVIP Helicobacter pylori 83 endonuclease MjaVIP YP_005784882.1 304225 D 585538 CDS YP_005784883.1 385224958 12365099 304935..305693 1 NC_017375.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 305693 hpaim 12365099 hpaim Helicobacter pylori 83 DNA (cytosine-5-)-methyltransferase YP_005784883.1 304935 D 585538 CDS YP_005784884.1 385224959 12365100 305765..308335 1 NC_017375.1 COG: COG0542; Pfam: PF02861,PF00004,PF07724; InterPro: IPR003593; chaperone protein ClpB 308335 clpB 12365100 clpB Helicobacter pylori 83 chaperone protein ClpB YP_005784884.1 305765 D 585538 CDS YP_005784885.1 385224960 12365101 308389..309111 1 NC_017375.1 COG: COG0785; Pfam: PF02683; InterPro: IPR003834; cytochrome c biogenesis protein 309111 12365101 HMPREF0462_0318 Helicobacter pylori 83 cytochrome c biogenesis protein YP_005784885.1 308389 D 585538 CDS YP_005784886.1 385224961 12365102 309121..310257 1 NC_017375.1 COG: COG0044; dihydroorotase 310257 pyrC 12365102 pyrC Helicobacter pylori 83 dihydroorotase YP_005784886.1 309121 D 585538 CDS YP_005784887.1 385224962 12365103 310242..311471 1 NC_017375.1 COG: COG0402; Pfam: PF01979; InterPro: IPR006680; amidohydrolase 311471 12365103 HMPREF0462_0320 Helicobacter pylori 83 amidohydrolase YP_005784887.1 310242 D 585538 CDS YP_005784888.1 385224963 12365104 311499..311774 1 NC_017375.1 hypothetical protein 311774 12365104 HMPREF0462_0321 Helicobacter pylori 83 hypothetical protein YP_005784888.1 311499 D 585538 CDS YP_005784889.1 385224964 12365105 311784..313097 1 NC_017375.1 COG: COG0621; Pfam: PF00919,PF04055; InterPro: IPR005839; tRNA-I(6)A37 thiotransferase enzyme MiaB 313097 miaB 12365105 miaB Helicobacter pylori 83 tRNA-I(6)A37 thiotransferase enzyme MiaB YP_005784889.1 311784 D 585538 CDS YP_005784890.1 385224965 12365106 313137..313790 1 NC_017375.1 COG: COG2121; Pfam: PF04028; InterPro: IPR007172; hypothetical protein 313790 12365106 HMPREF0462_0323 Helicobacter pylori 83 hypothetical protein YP_005784890.1 313137 D 585538 CDS YP_005784891.1 385224966 12365107 313783..314763 1 NC_017375.1 hypothetical protein 314763 12365107 HMPREF0462_0324 Helicobacter pylori 83 hypothetical protein YP_005784891.1 313783 D 585538 CDS YP_005784892.1 385224967 12365108 314744..315286 1 NC_017375.1 hypothetical protein 315286 12365108 HMPREF0462_0325 Helicobacter pylori 83 hypothetical protein YP_005784892.1 314744 D 585538 CDS YP_005784893.1 385224968 12365109 315283..315822 1 NC_017375.1 hypothetical protein 315822 12365109 HMPREF0462_0326 Helicobacter pylori 83 hypothetical protein YP_005784893.1 315283 D 585538 CDS YP_005784894.1 385224969 12365110 315839..316237 1 NC_017375.1 COG: COG0727; Pfam: PF03692; InterPro: IPR005358; hypothetical protein 316237 12365110 HMPREF0462_0327 Helicobacter pylori 83 hypothetical protein YP_005784894.1 315839 D 585538 CDS YP_005784895.1 385224970 12365111 316274..317569 1 NC_017375.1 COG: COG0457; ATP-dependent nuclease 317569 addB 12365111 addB Helicobacter pylori 83 ATP-dependent nuclease YP_005784895.1 316274 D 585538 CDS YP_005784896.1 385224971 12365112 317557..318114 1 NC_017375.1 Indole-3-glycerol phosphate synthase 318114 trpC 12365112 trpC Helicobacter pylori 83 Indole-3-glycerol phosphate synthase YP_005784896.1 317557 D 585538 CDS YP_005784897.1 385224972 12365113 318171..318425 1 NC_017375.1 COG: COG1145; Pfam: PF00037; ferredoxin 318425 fdx 12365113 fdx Helicobacter pylori 83 ferredoxin YP_005784897.1 318171 D 585538 CDS YP_005784898.1 385224973 12365114 318435..319889 1 NC_017375.1 COG: COG0248; Pfam: PF02541; InterPro: IPR003695; ppx/GppA family phosphatase 319889 gppA 12365114 gppA Helicobacter pylori 83 ppx/GppA family phosphatase YP_005784898.1 318435 D 585538 CDS YP_005784899.1 385224974 12365115 319886..320896 1 NC_017375.1 COG: COG0859; Pfam: PF01075; InterPro: IPR011908; lipopolysaccharide heptosyltransferase I 320896 rfaC 12365115 rfaC Helicobacter pylori 83 lipopolysaccharide heptosyltransferase I YP_005784899.1 319886 D 585538 CDS YP_005784900.1 385224975 12365116 320863..321879 1 NC_017375.1 COG: COG1560; Pfam: PF03279; InterPro: IPR004960; chaperone IbpB 321879 ibpB 12365116 ibpB Helicobacter pylori 83 chaperone IbpB YP_005784900.1 320863 D 585538 CDS YP_005784901.1 385224976 12365117 complement(321940..323055) 1 NC_017375.1 COG: COG0343; Pfam: PF01702; InterPro: IPR002616; tRNA-guanine transglycosylase 323055 tgt 12365117 tgt Helicobacter pylori 83 tRNA-guanine transglycosylase YP_005784901.1 321940 R 585538 CDS YP_005784902.1 385224977 12365118 323106..324548 1 NC_017375.1 COG: COG3400; Pfam: PF02080; InterPro: IPR006037; hypothetical protein 324548 12365118 HMPREF0462_0335 Helicobacter pylori 83 hypothetical protein YP_005784902.1 323106 D 585538 CDS YP_005784903.1 385224978 12365119 324555..325586 1 NC_017375.1 COG: COG0337; Pfam: PF01761; InterPro: IPR016037; 3-dehydroquinate synthase 325586 aroB 12365119 aroB Helicobacter pylori 83 3-dehydroquinate synthase YP_005784903.1 324555 D 585538 CDS YP_005784904.1 385224979 12365120 325577..327148 1 NC_017375.1 COG: COG0668; Pfam: PF00924; InterPro: IPR006685; mechanosensitive ion channel family protein 327148 12365120 HMPREF0462_0337 Helicobacter pylori 83 mechanosensitive ion channel family protein YP_005784904.1 325577 D 585538 CDS YP_005784905.1 385224980 12365121 327145..328401 1 NC_017375.1 COG: COG0621; Pfam: PF00919,PF04055; InterPro: IPR005839; 2-methylthioadenine synthase 328401 12365121 HMPREF0462_0338 Helicobacter pylori 83 2-methylthioadenine synthase YP_005784905.1 327145 D 585538 CDS YP_005784906.1 385224981 12365122 328388..330040 1 NC_017375.1 COG: COG0465; Pfam: PF00004; InterPro: IPR003959; cell division protein (ftsH) 330040 12365122 HMPREF0462_0339 Helicobacter pylori 83 cell division protein (ftsH) YP_005784906.1 328388 D 585538 CDS YP_005784907.1 385224982 12365123 330037..330561 1 NC_017375.1 hypothetical protein 330561 12365123 HMPREF0462_0340 Helicobacter pylori 83 hypothetical protein YP_005784907.1 330037 D 585538 CDS YP_005784908.1 385224983 12365124 330574..331047 1 NC_017375.1 hypothetical protein 331047 12365124 HMPREF0462_0341 Helicobacter pylori 83 hypothetical protein YP_005784908.1 330574 D 585538 CDS YP_005784909.1 385224984 12365125 331110..331784 1 NC_017375.1 Pfam: PF02691; InterPro: IPR003842; hypothetical protein 331784 12365125 HMPREF0462_0342 Helicobacter pylori 83 hypothetical protein YP_005784909.1 331110 D 585538 CDS YP_005784910.1 385224985 12365126 331804..334629 1 NC_017375.1 COG: COG5651; Pfam: PF03077; InterPro: IPR004311; hypothetical protein 334629 12365126 HMPREF0462_0343 Helicobacter pylori 83 hypothetical protein YP_005784910.1 331804 D 585538 CDS YP_005784911.1 385224986 12365127 334626..338162 1 NC_017375.1 COG: COG5651; Pfam: PF03077; InterPro: IPR004311; hypothetical protein 338162 12365127 HMPREF0462_0344 Helicobacter pylori 83 hypothetical protein YP_005784911.1 334626 D 585538 CDS YP_005784912.1 385224987 12365128 338159..338653 1 NC_017375.1 hypothetical protein 338653 12365128 HMPREF0462_0345 Helicobacter pylori 83 hypothetical protein YP_005784912.1 338159 D 585538 CDS YP_005784913.1 385224988 12365129 338616..339833 1 NC_017375.1 COG: COG5651; Pfam: PF03797; InterPro: IPR005546; hypothetical protein 339833 12365129 HMPREF0462_0346 Helicobacter pylori 83 hypothetical protein YP_005784913.1 338616 D 585538 CDS YP_005784914.1 385224989 12365130 339881..341098 1 NC_017375.1 COG: COG0019; Pfam: PF02784,PF00278; InterPro: IPR002986; diaminopimelate decarboxylase 341098 lysA 12365130 lysA Helicobacter pylori 83 diaminopimelate decarboxylase YP_005784914.1 339881 D 585538 CDS YP_005784915.1 385224990 12365131 341103..341393 1 NC_017375.1 COG: COG1605; Pfam: PF01817; InterPro: IPR002701; chorismate mutase 341393 12365131 HMPREF0462_0348 Helicobacter pylori 83 chorismate mutase YP_005784915.1 341103 D 585538 CDS YP_005784916.1 385224991 12365132 341406..342278 1 NC_017375.1 COG: COG4866; hypothetical protein 342278 12365132 HMPREF0462_0349 Helicobacter pylori 83 hypothetical protein YP_005784916.1 341406 D 585538 CDS YP_005784917.1 385224992 12365133 342279..343958 1 NC_017375.1 COG: COG0147; Pfam: PF00425; InterPro: IPR005801; para-aminobenzoate synthetase 343958 pabB 12365133 pabB Helicobacter pylori 83 para-aminobenzoate synthetase YP_005784917.1 342279 D 585538 CDS YP_005784918.1 385224993 12365134 344153..345172 1 NC_017375.1 COG: COG0388; Pfam: PF00795; InterPro: IPR003010; amidase 345172 amiE 12365134 amiE Helicobacter pylori 83 amidase YP_005784918.1 344153 D 585538 CDS YP_005784919.1 385224994 12365135 complement(345252..347738) 1 NC_017375.1 COG: COG1344; Pfam: PF00669; InterPro: IPR001029; flagellar hook-associated protein 3 347738 flgL 12365135 flgL Helicobacter pylori 83 flagellar hook-associated protein 3 YP_005784919.1 345252 R 585538 CDS YP_005784920.1 385224995 12365136 348010..348324 1 NC_017375.1 COG: COG0261; Pfam: PF00829; InterPro: IPR001787; 50S ribosomal protein L21 348324 rplU 12365136 rplU Helicobacter pylori 83 50S ribosomal protein L21 YP_005784920.1 348010 D 585538 CDS YP_005784921.1 385224996 12365137 348339..348605 1 NC_017375.1 COG: COG0211; Pfam: PF01016; InterPro: IPR001684; 50S ribosomal protein L27 348605 rpmA 12365137 rpmA Helicobacter pylori 83 50S ribosomal protein L27 YP_005784921.1 348339 D 585538 CDS YP_005784922.1 385224997 12365138 348726..350375 1 NC_017375.1 COG: COG0747; Pfam: PF00496; InterPro: IPR000914; heme ABC superfamily ATP binding cassette transporter, binding protein 350375 hbpA 12365138 hbpA Helicobacter pylori 83 heme ABC superfamily ATP binding cassette transporter, binding protein YP_005784922.1 348726 D 585538 CDS YP_005784923.1 385224998 12365139 350385..351389 1 NC_017375.1 COG: COG0601; Pfam: PF00528; InterPro: IPR000515; dipeptide ABC superfamily ATP binding cassette transporter, permease protein 351389 dppB 12365139 dppB Helicobacter pylori 83 dipeptide ABC superfamily ATP binding cassette transporter, permease protein YP_005784923.1 350385 D 585538 CDS YP_005784924.1 385224999 12365140 351389..352246 1 NC_017375.1 COG: COG1173; Pfam: PF00528; InterPro: IPR000515; oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 352246 dppC 12365140 dppC Helicobacter pylori 83 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005784924.1 351389 D 585538 CDS YP_005784925.1 385225000 12365141 352258..353121 1 NC_017375.1 COG: COG0444; Pfam: PF00005,PF08352; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein 353121 12365141 HMPREF0462_0358 Helicobacter pylori 83 ABC superfamily ATP binding cassette transporter, ABC protein YP_005784925.1 352258 D 585538 CDS YP_005784926.1 385225001 12365142 353118..353924 1 NC_017375.1 COG: COG4608; Pfam: PF00005,PF08352; InterPro: IPR003593; oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 353924 dppF 12365142 dppF Helicobacter pylori 83 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein YP_005784926.1 353118 D 585538 CDS YP_005784927.1 385225002 12365143 353944..355026 1 NC_017375.1 COG: COG0536; Pfam: PF01018,PF01926; InterPro: IPR014100; obg family GTPase CgtA 355026 cgtA 12365143 cgtA Helicobacter pylori 83 obg family GTPase CgtA YP_005784927.1 353944 D 585538 CDS YP_005784928.1 385225003 12365144 355068..356063 1 NC_017375.1 hypothetical protein 356063 12365144 HMPREF0462_0361 Helicobacter pylori 83 hypothetical protein YP_005784928.1 355068 D 585538 CDS YP_005784929.1 385225004 12365145 356310..356864 1 NC_017375.1 hypothetical protein 356864 12365145 HMPREF0462_0362 Helicobacter pylori 83 hypothetical protein YP_005784929.1 356310 D 585538 CDS YP_005784930.1 385225005 12365146 356874..358166 1 NC_017375.1 COG: COG0001; Pfam: PF00202; InterPro: IPR004639; glutamate-1-semialdehyde-2,1-aminomutase 358166 hemL 12365146 hemL Helicobacter pylori 83 glutamate-1-semialdehyde-2,1-aminomutase YP_005784930.1 356874 D 585538 CDS YP_005784931.1 385225006 12365147 358159..358431 1 NC_017375.1 hypothetical protein 358431 12365147 HMPREF0462_0364 Helicobacter pylori 83 hypothetical protein YP_005784931.1 358159 D 585538 CDS YP_005784932.1 385225007 12365148 358452..358856 1 NC_017375.1 hypothetical protein 358856 12365148 HMPREF0462_0365 Helicobacter pylori 83 hypothetical protein YP_005784932.1 358452 D 585538 CDS YP_005784933.1 385225008 12365149 358940..359824 1 NC_017375.1 COG: COG0388; Pfam: PF00795; InterPro: IPR003010; N-carbamoyl-D-amino acid amidohydrolase 359824 12365149 HMPREF0462_0366 Helicobacter pylori 83 N-carbamoyl-D-amino acid amidohydrolase YP_005784933.1 358940 D 585538 CDS YP_005784934.1 385225009 12365150 359837..360718 1 NC_017375.1 COG: COG0726; Pfam: PF01522; InterPro: IPR002509; polysaccharide deacetylase 360718 12365150 HMPREF0462_0367 Helicobacter pylori 83 polysaccharide deacetylase YP_005784934.1 359837 D 585538 CDS YP_005784935.1 385225010 12365151 complement(360772..361464) 1 NC_017375.1 type II site-specific deoxyribonuclease 361464 ddeIR 12365151 ddeIR Helicobacter pylori 83 type II site-specific deoxyribonuclease YP_005784935.1 360772 R 585538 CDS YP_005784936.1 385225011 12365152 complement(361475..362584) 1 NC_017375.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 362584 12365152 HMPREF0462_0369 Helicobacter pylori 83 DNA (cytosine-5-)-methyltransferase YP_005784936.1 361475 R 585538 CDS YP_005784937.1 385225012 12365153 362680..363057 1 NC_017375.1 hypothetical protein 363057 12365153 HMPREF0462_0370 Helicobacter pylori 83 hypothetical protein YP_005784937.1 362680 D 585538 CDS YP_005784938.1 385225013 12365154 363057..364022 1 NC_017375.1 COG: COG0523; Pfam: PF02492,PF07683; InterPro: IPR003495; cobalamin synthesis protein 364022 12365154 HMPREF0462_0371 Helicobacter pylori 83 cobalamin synthesis protein YP_005784938.1 363057 D 585538 CDS YP_005784939.1 385225014 12365155 complement(364028..365173) 1 NC_017375.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; nitrite extrusion protein NarK 365173 narK 12365155 narK Helicobacter pylori 83 nitrite extrusion protein NarK YP_005784939.1 364028 R 585538 CDS YP_005784940.1 385225015 12365156 365317..365547 1 NC_017375.1 hypothetical protein 365547 12365156 HMPREF0462_0373 Helicobacter pylori 83 hypothetical protein YP_005784940.1 365317 D 585538 CDS YP_005784941.1 385225016 12365157 complement(365663..366418) 1 NC_017375.1 COG: COG0748; Pfam: PF01243; InterPro: IPR012349; heme iron utilization protein 366418 12365157 HMPREF0462_0374 Helicobacter pylori 83 heme iron utilization protein YP_005784941.1 365663 R 585538 CDS YP_005784942.1 385225017 12365158 complement(366479..368104) 1 NC_017375.1 COG: COG0018; Pfam: PF03485,PF00750,PF05746; InterPro: IPR001278; arginine--tRNA ligase 368104 argS 12365158 argS Helicobacter pylori 83 arginine--tRNA ligase YP_005784942.1 366479 R 585538 CDS YP_005784943.1 385225018 12365159 complement(368107..368346) 1 NC_017375.1 Pfam: PF02416; InterPro: IPR003369; TAT family twin arginine targeting transporter 368346 12365159 HMPREF0462_0376 Helicobacter pylori 83 TAT family twin arginine targeting transporter YP_005784943.1 368107 R 585538 CDS YP_005784944.1 385225019 12365160 complement(368416..369036) 1 NC_017375.1 COG: COG0194; Pfam: PF00625; InterPro: IPR008145; guanylate kinase 369036 gmk 12365160 gmk Helicobacter pylori 83 guanylate kinase YP_005784944.1 368416 R 585538 CDS YP_005784945.1 385225020 12365161 complement(369029..370423) 1 NC_017375.1 poly E-rich protein 370423 12365161 HMPREF0462_0378 Helicobacter pylori 83 poly E-rich protein YP_005784945.1 369029 R 585538 CDS YP_005784946.1 385225021 12365162 complement(370436..370561) 1 NC_017375.1 hypothetical protein 370561 12365162 HMPREF0462_0379 Helicobacter pylori 83 hypothetical protein YP_005784946.1 370436 R 585538 CDS YP_005784947.1 385225022 12365163 370565..371107 1 NC_017375.1 COG: COG1502; Pfam: PF00614; membrane bound endonuclease 371107 nuc 12365163 nuc Helicobacter pylori 83 membrane bound endonuclease YP_005784947.1 370565 D 585538 CDS YP_005784948.1 385225023 12365164 complement(371114..371878) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 371878 12365164 HMPREF0462_0381 Helicobacter pylori 83 outer membrane protein YP_005784948.1 371114 R 585538 CDS YP_005784949.1 385225024 12365165 371981..372694 1 NC_017375.1 COG: COG2063; Pfam: PF02107; InterPro: IPR000527; flagellar L-ring protein FlgH 372694 flgI2 12365165 flgI2 Helicobacter pylori 83 flagellar L-ring protein FlgH YP_005784949.1 371981 D 585538 CDS YP_005784950.1 385225025 12365166 372712..373395 1 NC_017375.1 COG: COG1083; Pfam: PF02348; InterPro: IPR003329; pseudaminic acid CMP-transferase 373395 pseF 12365166 pseF Helicobacter pylori 83 pseudaminic acid CMP-transferase YP_005784950.1 372712 D 585538 CDS YP_005784951.1 385225026 12365167 373386..374258 1 NC_017375.1 COG: COG3980; Pfam: PF02348; N-acylneuraminate cytidylyltransferase 374258 neuA 12365167 neuA Helicobacter pylori 83 N-acylneuraminate cytidylyltransferase YP_005784951.1 373386 D 585538 CDS YP_005784952.1 385225027 12365168 374255..374797 1 NC_017375.1 COG: COG1670; Pfam: PF00583; InterPro: IPR016181; pseudaminic acid biosynthesis N-acetyl transferase 374797 pseH 12365168 pseH Helicobacter pylori 83 pseudaminic acid biosynthesis N-acetyl transferase YP_005784952.1 374255 D 585538 CDS YP_005784953.1 385225028 12365169 complement(374730..375668) 1 NC_017375.1 COG: COG1663; Pfam: PF02606; InterPro: IPR003758; tetraacyldisaccharide 4'-kinase 375668 lpxK 12365169 lpxK Helicobacter pylori 83 tetraacyldisaccharide 4'-kinase YP_005784953.1 374730 R 585538 CDS YP_005784954.1 385225029 12365170 complement(375665..376447) 1 NC_017375.1 COG: COG0171; Pfam: PF02540; InterPro: IPR003694; NAD+ synthetase 376447 nadE 12365170 nadE Helicobacter pylori 83 NAD+ synthetase YP_005784954.1 375665 R 585538 CDS YP_005784955.1 385225030 12365172 376696..377688 1 NC_017375.1 COG: COG0059; Pfam: PF07991,PF01450; InterPro: IPR013023; ketol-acid reductoisomerase 377688 ilvC 12365172 ilvC Helicobacter pylori 83 ketol-acid reductoisomerase YP_005784955.1 376696 D 585538 CDS YP_005784956.1 385225031 12365173 377707..378513 1 NC_017375.1 COG: COG2894; Pfam: PF01656; InterPro: IPR010223; septum site-determining protein MinD 378513 minD 12365173 minD Helicobacter pylori 83 septum site-determining protein MinD YP_005784956.1 377707 D 585538 CDS YP_005784957.1 385225032 12365174 378510..378743 1 NC_017375.1 COG: COG0851; Pfam: PF03776; InterPro: IPR005527; cell division topological specificity factor MinE 378743 minE 12365174 minE Helicobacter pylori 83 cell division topological specificity factor MinE YP_005784957.1 378510 D 585538 CDS YP_005784958.1 385225033 12365175 378755..379555 1 NC_017375.1 COG: COG0758; Pfam: PF02481; InterPro: IPR003488; DNA protecting protein DprA 379555 dprA 12365175 dprA Helicobacter pylori 83 DNA protecting protein DprA YP_005784958.1 378755 D 585538 CDS YP_005784959.1 385225034 12365176 379552..379956 1 NC_017375.1 COG: COG0816; Pfam: PF03652; InterPro: IPR005227; Holliday junction resolvase family protein 379956 12365176 HMPREF0462_0392 Helicobacter pylori 83 Holliday junction resolvase family protein YP_005784959.1 379552 D 585538 CDS YP_005784960.1 385225035 12365177 380087..380560 1 NC_017375.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 380560 hcpB 12365177 hcpB Helicobacter pylori 83 beta-lactamase YP_005784960.1 380087 D 585538 CDS YP_005784961.1 385225036 12365178 380748..381086 1 NC_017375.1 hypothetical protein 381086 12365178 HMPREF0462_0394 Helicobacter pylori 83 hypothetical protein YP_005784961.1 380748 D 585538 CDS YP_005784962.1 385225037 12365179 381070..381630 1 NC_017375.1 hypothetical protein 381630 12365179 HMPREF0462_0395 Helicobacter pylori 83 hypothetical protein YP_005784962.1 381070 D 585538 CDS YP_005784963.1 385225038 12365180 381641..382141 1 NC_017375.1 Pfam: PF00959; InterPro: IPR002196; lysozyme family protein 382141 12365180 HMPREF0462_0396 Helicobacter pylori 83 lysozyme family protein YP_005784963.1 381641 D 585538 CDS YP_005784964.1 385225039 12365181 382161..382322 1 NC_017375.1 hypothetical protein 382322 12365181 HMPREF0462_0397 Helicobacter pylori 83 hypothetical protein YP_005784964.1 382161 D 585538 CDS YP_005784965.1 385225040 12365182 382380..382574 1 NC_017375.1 beta-lactamase HcpA 382574 12365182 HMPREF0462_0398 Helicobacter pylori 83 beta-lactamase HcpA YP_005784965.1 382380 D 585538 CDS YP_005784966.1 385225041 12365183 382652..383038 1 NC_017375.1 Pfam: PF06961; InterPro: IPR010718; hypothetical protein 383038 12365183 HMPREF0462_0399 Helicobacter pylori 83 hypothetical protein YP_005784966.1 382652 D 585538 CDS YP_005784967.1 385225042 12365184 383347..383823 1 NC_017375.1 hypothetical protein 383823 12365184 HMPREF0462_0400 Helicobacter pylori 83 hypothetical protein YP_005784967.1 383347 D 585538 CDS YP_005784968.1 385225043 12365185 383813..384937 1 NC_017375.1 hypothetical protein 384937 12365185 HMPREF0462_0401 Helicobacter pylori 83 hypothetical protein YP_005784968.1 383813 D 585538 CDS YP_005784969.1 385225044 12365186 complement(384982..385863) 1 NC_017375.1 COG: COG0564; Pfam: PF00849; InterPro: IPR006145; pseudouridine synthase D 385863 12365186 HMPREF0462_0402 Helicobacter pylori 83 pseudouridine synthase D YP_005784969.1 384982 R 585538 CDS YP_005784970.1 385225045 12365187 complement(385863..387413) 1 NC_017375.1 COG: COG0608; Pfam: PF01368,PF02272; InterPro: IPR004610; single-stranded-DNA-specific exonuclease RecJ 387413 recJ 12365187 recJ Helicobacter pylori 83 single-stranded-DNA-specific exonuclease RecJ YP_005784970.1 385863 R 585538 CDS YP_005784971.1 385225046 12365188 complement(387423..389039) 1 NC_017375.1 COG: COG0504; Pfam: PF06418,PF00117; InterPro: IPR004468; CTP synthase 389039 pyrG 12365188 pyrG Helicobacter pylori 83 CTP synthase YP_005784971.1 387423 R 585538 CDS YP_005784972.1 385225047 12365189 389026..389190 1 NC_017375.1 hypothetical protein 389190 12365189 HMPREF0462_0405 Helicobacter pylori 83 hypothetical protein YP_005784972.1 389026 D 585538 CDS YP_005784973.1 385225048 12365190 389307..389969 1 NC_017375.1 hypothetical protein 389969 12365190 HMPREF0462_0406 Helicobacter pylori 83 hypothetical protein YP_005784973.1 389307 D 585538 CDS YP_005784974.1 385225049 12365191 390013..391716 1 NC_017375.1 COG: COG1766; Pfam: PF01514,PF08345; InterPro: IPR000067; flagellar M-ring protein FliF 391716 fliF 12365191 fliF Helicobacter pylori 83 flagellar M-ring protein FliF YP_005784974.1 390013 D 585538 CDS YP_005784975.1 385225050 12365192 391735..392766 1 NC_017375.1 COG: COG1536; Pfam: PF01706; InterPro: IPR000090; flagellar motor switch protein FliG 392766 fliG 12365192 fliG Helicobacter pylori 83 flagellar motor switch protein FliG YP_005784975.1 391735 D 585538 CDS YP_005784976.1 385225051 12365193 392753..393529 1 NC_017375.1 COG: COG1317; Pfam: PF02108; flagellar export protein 393529 fliH 12365193 fliH Helicobacter pylori 83 flagellar export protein YP_005784976.1 392753 D 585538 CDS YP_005784977.1 385225052 12365194 393526..395382 1 NC_017375.1 COG: COG1154; Pfam: PF02779,PF02780; InterPro: IPR005477; 1-deoxy-D-xylulose-5-phosphate synthase 395382 dxs 12365194 dxs Helicobacter pylori 83 1-deoxy-D-xylulose-5-phosphate synthase YP_005784977.1 393526 D 585538 CDS YP_005784978.1 385225053 12365195 395379..397187 1 NC_017375.1 COG: COG0481; Pfam: PF00009,PF03144,PF00679,PF06421; InterPro: IPR006297; GTP-binding protein LepA 397187 lepA 12365195 lepA Helicobacter pylori 83 GTP-binding protein LepA YP_005784978.1 395379 D 585538 CDS YP_005784979.1 385225054 12365196 397202..397960 1 NC_017375.1 COG: COG5048; hypothetical protein 397960 12365196 HMPREF0462_0412 Helicobacter pylori 83 hypothetical protein YP_005784979.1 397202 D 585538 CDS YP_005784980.1 385225055 12365197 398262..398519 1 NC_017375.1 hypothetical protein 398519 12365197 HMPREF0462_0413 Helicobacter pylori 83 hypothetical protein YP_005784980.1 398262 D 585538 CDS YP_005784981.1 385225056 12365198 complement(398585..399394) 1 NC_017375.1 COG: COG4786; Pfam: PF00460; flagellar basal-body rod protein 399394 flgG 12365198 flgG Helicobacter pylori 83 flagellar basal-body rod protein YP_005784981.1 398585 R 585538 CDS YP_005784982.1 385225057 12365199 complement(399443..400723) 1 NC_017375.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; alpha-ketoglutarate permease 400723 kgtP 12365199 kgtP Helicobacter pylori 83 alpha-ketoglutarate permease YP_005784982.1 399443 R 585538 CDS YP_005784983.1 385225058 12365200 complement(400891..403464) 1 NC_017375.1 COG: COG1674; Pfam: PF01580; InterPro: IPR002543; DNA translocase FtsK 403464 ftsK 12365200 ftsK Helicobacter pylori 83 DNA translocase FtsK YP_005784983.1 400891 R 585538 CDS YP_005784984.1 385225059 12365201 complement(403461..405797) 1 NC_017375.1 COG: COG3893; hypothetical protein 405797 12365201 HMPREF0462_0417 Helicobacter pylori 83 hypothetical protein YP_005784984.1 403461 R 585538 CDS YP_005784985.1 385225060 12365202 complement(405794..407719) 1 NC_017375.1 COG: COG0021; Pfam: PF00456,PF02779,PF02780; InterPro: IPR005478; transketolase 407719 tkt 12365202 tkt Helicobacter pylori 83 transketolase YP_005784985.1 405794 R 585538 CDS YP_005784986.1 385225061 12365203 complement(407766..408608) 1 NC_017375.1 COG: COG0196; Pfam: PF06574,PF01687; InterPro: IPR002606; riboflavin biosynthesis protein RibF 408608 ribF 12365203 ribF Helicobacter pylori 83 riboflavin biosynthesis protein RibF YP_005784986.1 407766 R 585538 CDS YP_005784987.1 385225062 12365204 complement(408574..409281) 1 NC_017375.1 COG: COG1189; Pfam: PF01479,PF01728; InterPro: IPR004538; ribosomal RNA large subunit methyltransferase J 409281 rrmJ 12365204 rrmJ Helicobacter pylori 83 ribosomal RNA large subunit methyltransferase J YP_005784987.1 408574 R 585538 CDS YP_005784988.1 385225063 12365205 complement(409281..409796) 1 NC_017375.1 hypothetical protein 409796 12365205 HMPREF0462_0421 Helicobacter pylori 83 hypothetical protein YP_005784988.1 409281 R 585538 CDS YP_005784989.1 385225064 12365206 409863..410786 1 NC_017375.1 COG: COG0540; Pfam: PF02729,PF00185; InterPro: IPR002082; aspartate carbamoyltransferase 410786 pyrB 12365206 pyrB Helicobacter pylori 83 aspartate carbamoyltransferase YP_005784989.1 409863 D 585538 CDS YP_005784990.1 385225065 12365207 411083..412522 1 NC_017375.1 Pfam: PF02521; InterPro: IPR003678; outer membrane protein HofB 412522 12365207 HMPREF0462_0423 Helicobacter pylori 83 outer membrane protein HofB YP_005784990.1 411083 D 585538 CDS YP_005784991.1 385225066 12365208 412614..414269 1 NC_017375.1 COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR001140; lipid A export ATP-binding/permease protein MsbA 414269 msbA 12365208 msbA Helicobacter pylori 83 lipid A export ATP-binding/permease protein MsbA YP_005784991.1 412614 D 585538 CDS YP_005784992.1 385225067 12365209 414263..414886 1 NC_017375.1 hypothetical protein 414886 12365209 HMPREF0462_0425 Helicobacter pylori 83 hypothetical protein YP_005784992.1 414263 D 585538 CDS YP_005784993.1 385225068 12365210 414890..415459 1 NC_017375.1 COG: COG1787; Pfam: PF04471; InterPro: IPR007560; type II restriction endonuclease 415459 12365210 HMPREF0462_0426 Helicobacter pylori 83 type II restriction endonuclease YP_005784993.1 414890 D 585538 CDS YP_005784994.1 385225069 12365211 415570..416715 1 NC_017375.1 COG: COG1106; Pfam: PF02463; hypothetical protein 416715 12365211 HMPREF0462_0427 Helicobacter pylori 83 hypothetical protein YP_005784994.1 415570 D 585538 CDS YP_005784995.1 385225070 12365212 416708..417421 1 NC_017375.1 hypothetical protein 417421 12365212 HMPREF0462_0428 Helicobacter pylori 83 hypothetical protein YP_005784995.1 416708 D 585538 CDS YP_005784996.1 385225071 12365213 417478..418473 1 NC_017375.1 COG: COG3376; Pfam: PF03824; InterPro: IPR011541; high-affinity nickel-transporter 418473 nixA 12365213 nixA Helicobacter pylori 83 high-affinity nickel-transporter YP_005784996.1 417478 D 585538 CDS YP_005784997.1 385225072 12365214 complement(418477..418992) 1 NC_017375.1 hypothetical protein 418992 12365214 HMPREF0462_0430 Helicobacter pylori 83 hypothetical protein YP_005784997.1 418477 R 585538 CDS YP_005784998.1 385225073 12365215 419126..420442 1 NC_017375.1 hypothetical protein 420442 12365215 HMPREF0462_0431 Helicobacter pylori 83 hypothetical protein YP_005784998.1 419126 D 585538 CDS YP_005784999.1 385225074 12365216 420614..420802 1 NC_017375.1 hypothetical protein 420802 12365216 HMPREF0462_0432 Helicobacter pylori 83 hypothetical protein YP_005784999.1 420614 D 585538 CDS YP_005785000.1 385225075 12365217 complement(421187..421387) 1 NC_017375.1 Pfam: PF00403; InterPro: IPR006122; copper ion binding protein (copP) 421387 12365217 HMPREF0462_0433 Helicobacter pylori 83 copper ion binding protein (copP) YP_005785000.1 421187 R 585538 CDS YP_005785001.1 385225076 12365218 complement(421388..423586) 1 NC_017375.1 COG: COG2217; Pfam: PF00403,PF00122,PF00702; InterPro: IPR001757; P-ATPase superfamily P-type ATPase copper transporter 423586 copA 12365218 copA Helicobacter pylori 83 P-ATPase superfamily P-type ATPase copper transporter YP_005785001.1 421388 R 585538 CDS YP_005785002.1 385225077 12365219 complement(423610..424323) 1 NC_017375.1 COG: COG1183; Pfam: PF01066; InterPro: IPR004533; CDP-diacylglycerol--serine O-phosphatidyltransferase 424323 pssA 12365219 pssA Helicobacter pylori 83 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_005785002.1 423610 R 585538 CDS YP_005785003.1 385225078 12365220 complement(424313..424567) 1 NC_017375.1 hypothetical protein 424567 12365220 HMPREF0462_0436 Helicobacter pylori 83 hypothetical protein YP_005785003.1 424313 R 585538 CDS YP_005785004.1 385225079 12365221 complement(424570..426468) 1 NC_017375.1 COG: COG0465; Pfam: PF06480,PF00004,PF01434; InterPro: IPR005936; cell division protein FtsH 426468 ftsH 12365221 ftsH Helicobacter pylori 83 cell division protein FtsH YP_005785004.1 424570 R 585538 CDS YP_005785005.1 385225080 12365222 complement(426477..427466) 1 NC_017375.1 COG: COG2264; Pfam: PF06325; InterPro: IPR010456; 50S ribosomal protein L11 methyltransferase 427466 prmA 12365222 prmA Helicobacter pylori 83 50S ribosomal protein L11 methyltransferase YP_005785005.1 426477 R 585538 CDS YP_005785006.1 385225081 12365223 complement(427467..427808) 1 NC_017375.1 COG: COG0784; Pfam: PF00072; InterPro: IPR001789; chemotaxis response regulator CheY 427808 cheY 12365223 cheY Helicobacter pylori 83 chemotaxis response regulator CheY YP_005785006.1 427467 R 585538 CDS YP_005785007.1 385225082 12365224 428204..428734 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HorD 428734 horD 12365224 horD Helicobacter pylori 83 outer membrane protein HorD YP_005785007.1 428204 D 585538 CDS YP_005785008.1 385225083 12365226 complement(428864..429271) 1 NC_017375.1 hypothetical protein 429271 12365226 HMPREF0462_0441 Helicobacter pylori 83 hypothetical protein YP_005785008.1 428864 R 585538 CDS YP_005785009.1 385225084 12365227 complement(429274..429516) 1 NC_017375.1 hypothetical protein 429516 12365227 HMPREF0462_0442 Helicobacter pylori 83 hypothetical protein YP_005785009.1 429274 R 585538 CDS YP_005785010.1 385225085 12365228 complement(429510..430046) 1 NC_017375.1 COG: COG0357; Pfam: PF02527; InterPro: IPR003682; 16S rRNA methyltransferase GidB 430046 gidB 12365228 gidB Helicobacter pylori 83 16S rRNA methyltransferase GidB YP_005785010.1 429510 R 585538 CDS YP_005785011.1 385225086 12365229 complement(430043..431080) 1 NC_017375.1 COG: COG0809; Pfam: PF02547; InterPro: IPR003699; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 431080 queA 12365229 queA Helicobacter pylori 83 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_005785011.1 430043 R 585538 CDS YP_005785012.1 385225087 12365230 complement(431081..431842) 1 NC_017375.1 COG: COG0805; Pfam: PF00902; InterPro: IPR002033; twin arginine-targeting protein translocase TatC 431842 tatC 12365230 tatC Helicobacter pylori 83 twin arginine-targeting protein translocase TatC YP_005785012.1 431081 R 585538 CDS YP_005785013.1 385225088 12365231 complement(431835..432311) 1 NC_017375.1 Pfam: PF02416; InterPro: IPR003998; sec-independent protein translocase TatB-like protein 432311 12365231 HMPREF0462_0446 Helicobacter pylori 83 sec-independent protein translocase TatB-like protein YP_005785013.1 431835 R 585538 CDS YP_005785014.1 385225089 12365232 complement(432379..433389) 1 NC_017375.1 COG: COG2255; Pfam: PF05496,PF00004,PF05491; InterPro: IPR004605; crossover junction ATP-dependent DNA helicase RuvB 433389 ruvB 12365232 ruvB Helicobacter pylori 83 crossover junction ATP-dependent DNA helicase RuvB YP_005785014.1 432379 R 585538 CDS YP_005785015.1 385225090 12365233 complement(433390..434202) 1 NC_017375.1 COG: COG0413; Pfam: PF02548; InterPro: IPR003700; 3-methyl-2-oxobutanoate hydroxymethyltransferase 434202 panB 12365233 panB Helicobacter pylori 83 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_005785015.1 433390 R 585538 CDS YP_005785016.1 385225091 12365234 434351..435073 1 NC_017375.1 Pfam: PF01856; outer membrane protein 435073 12365234 HMPREF0462_0449 Helicobacter pylori 83 outer membrane protein YP_005785016.1 434351 D 585538 CDS YP_005785017.1 385225092 12365235 435063..435917 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 435917 12365235 HMPREF0462_0450 Helicobacter pylori 83 outer membrane protein YP_005785017.1 435063 D 585538 CDS YP_005785018.1 385225093 12365236 435926..436864 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 436864 12365236 HMPREF0462_0451 Helicobacter pylori 83 outer membrane protein YP_005785018.1 435926 D 585538 CDS YP_005785019.1 385225094 12365237 436874..438196 1 NC_017375.1 COG: COG0739; hypothetical protein 438196 12365237 HMPREF0462_0452 Helicobacter pylori 83 hypothetical protein YP_005785019.1 436874 D 585538 CDS YP_005785020.1 385225095 12365238 438199..438786 1 NC_017375.1 Pfam: PF03775; InterPro: IPR005526; septum site-determining protein MinC 438786 minC 12365238 minC Helicobacter pylori 83 septum site-determining protein MinC YP_005785020.1 438199 D 585538 CDS YP_005785021.1 385225096 12365239 438783..439670 1 NC_017375.1 COG: COG0774; Pfam: PF03331; InterPro: IPR004463; bifunctional UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase/(3R)-hydroxymyristoyl-[acyl-carrier- protein] dehydratase 439670 lpxC 12365239 lpxC Helicobacter pylori 83 bifunctional UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase/(3R)-hydroxymyristoyl-[acyl-carrier- protein] dehydratase YP_005785021.1 438783 D 585538 CDS YP_005785022.1 385225097 12365240 439692..440165 1 NC_017375.1 COG: COG1214; hypothetical protein 440165 yeaZ 12365240 yeaZ Helicobacter pylori 83 hypothetical protein YP_005785022.1 439692 D 585538 CDS YP_005785023.1 385225098 12365241 440220..441101 1 NC_017375.1 COG: COG0083; Pfam: PF00288; InterPro: IPR000870; homoserine kinase 441101 thrB 12365241 thrB Helicobacter pylori 83 homoserine kinase YP_005785023.1 440220 D 585538 CDS YP_005785024.1 385225099 12365242 441073..441342 1 NC_017375.1 COG: COG2740; Pfam: PF04296; InterPro: IPR007393; hypothetical protein 441342 12365242 HMPREF0462_0457 Helicobacter pylori 83 hypothetical protein YP_005785024.1 441073 D 585538 CDS YP_005785025.1 385225100 12365243 441339..444173 1 NC_017375.1 COG: COG0532; Pfam: PF04760,PF00009,PF03144; InterPro: IPR000178; translation initiation factor IF-2 444173 infB 12365243 infB Helicobacter pylori 83 translation initiation factor IF-2 YP_005785025.1 441339 D 585538 CDS YP_005785026.1 385225101 12365244 444173..444508 1 NC_017375.1 COG: COG0858; Pfam: PF02033; InterPro: IPR015946; ribosome-binding factor A 444508 rbfA 12365244 rbfA Helicobacter pylori 83 ribosome-binding factor A YP_005785026.1 444173 D 585538 CDS YP_005785027.1 385225102 12365245 444501..444941 1 NC_017375.1 COG: COG0779; Pfam: PF02576; InterPro: IPR003728; hypothetical protein 444941 12365245 HMPREF0462_0460 Helicobacter pylori 83 hypothetical protein YP_005785027.1 444501 D 585538 CDS YP_005785028.1 385225103 12365246 complement(445049..447037) 1 NC_017375.1 COG: COG0365; Pfam: PF00501; InterPro: IPR011904; acetate-CoA ligase 447037 acsA 12365246 acsA Helicobacter pylori 83 acetate-CoA ligase YP_005785028.1 445049 R 585538 CDS YP_005785029.1 385225104 12365247 447234..448346 1 NC_017375.1 COG: COG1408; Pfam: PF00149; InterPro: IPR004843; integral membrane protein 448346 12365247 HMPREF0462_0462 Helicobacter pylori 83 integral membrane protein YP_005785029.1 447234 D 585538 CDS YP_005785030.1 385225105 12365248 448725..449396 1 NC_017375.1 COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789; DNA-binding response regulator 449396 12365248 HMPREF0462_0463 Helicobacter pylori 83 DNA-binding response regulator YP_005785030.1 448725 D 585538 CDS YP_005785031.1 385225106 12365249 complement(449920..450966) 1 NC_017375.1 COG: COG2404; Pfam: PF01368,PF02272; hypothetical protein 450966 12365249 HMPREF0462_0464 Helicobacter pylori 83 hypothetical protein YP_005785031.1 449920 R 585538 CDS YP_005785032.1 385225107 12365250 complement(450994..453195) 1 NC_017375.1 COG: COG1298; Pfam: PF00771; InterPro: IPR006301; flagellar biosynthesis protein FlhA 453195 flhA 12365250 flhA Helicobacter pylori 83 flagellar biosynthesis protein FlhA YP_005785032.1 450994 R 585538 CDS YP_005785033.1 385225108 12365251 453334..453606 1 NC_017375.1 COG: COG0184; Pfam: PF00312; InterPro: IPR009068; 30S ribosomal protein S15 453606 rpsO 12365251 rpsO Helicobacter pylori 83 30S ribosomal protein S15 YP_005785033.1 453334 D 585538 CDS YP_005785034.1 385225109 12365252 453637..454926 1 NC_017375.1 Pfam: PF04932; InterPro: IPR007016; hypothetical protein 454926 12365252 HMPREF0462_0467 Helicobacter pylori 83 hypothetical protein YP_005785034.1 453637 D 585538 CDS YP_005785035.1 385225110 12365253 455049..455552 1 NC_017375.1 COG: COG0757; Pfam: PF01220; InterPro: IPR001874; 3-dehydroquinate dehydratase 455552 aroQ 12365253 aroQ Helicobacter pylori 83 3-dehydroquinate dehydratase YP_005785035.1 455049 D 585538 CDS YP_005785036.1 385225111 12365254 455566..456639 1 NC_017375.1 COG: COG0006; Pfam: PF00557; InterPro: IPR000994; proline peptidase 456639 12365254 HMPREF0462_0469 Helicobacter pylori 83 proline peptidase YP_005785036.1 455566 D 585538 CDS YP_005785037.1 385225112 12365255 456639..457127 1 NC_017375.1 COG: COG0801; Pfam: PF01288; InterPro: IPR000550; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 457127 folK 12365255 folK Helicobacter pylori 83 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase YP_005785037.1 456639 D 585538 CDS YP_005785038.1 385225113 12365256 457124..458500 1 NC_017375.1 COG: COG1419; Pfam: PF02881,PF00448; InterPro: IPR000897; flagellar biosynthesis protein FlhF 458500 flhF 12365256 flhF Helicobacter pylori 83 flagellar biosynthesis protein FlhF YP_005785038.1 457124 D 585538 CDS YP_005785039.1 385225114 12365257 458497..459381 1 NC_017375.1 COG: COG0455; Pfam: PF01656; InterPro: IPR002586; ParA family ATPase 459381 ylxH 12365257 ylxH Helicobacter pylori 83 ParA family ATPase YP_005785039.1 458497 D 585538 CDS YP_005785040.1 385225115 12365258 459386..459700 1 NC_017375.1 hypothetical protein 459700 12365258 HMPREF0462_0473 Helicobacter pylori 83 hypothetical protein YP_005785040.1 459386 D 585538 CDS YP_005785041.1 385225116 12365259 459678..460454 1 NC_017375.1 COG: COG1191; Pfam: PF04542,PF04545; InterPro: IPR014284; DNA-directed RNA polymerase sigma subunit FliA 460454 fliA 12365259 fliA Helicobacter pylori 83 DNA-directed RNA polymerase sigma subunit FliA YP_005785041.1 459678 D 585538 CDS YP_005785042.1 385225117 12365260 460447..461511 1 NC_017375.1 COG: COG1868; Pfam: PF02154,PF01052; InterPro: IPR001689; flagellar motor switch protein FliM 461511 fliM 12365260 fliM Helicobacter pylori 83 flagellar motor switch protein FliM YP_005785042.1 460447 D 585538 CDS YP_005785043.1 385225118 12365261 461515..462378 1 NC_017375.1 Pfam: PF01052; InterPro: IPR012826; flagellar motor switch protein 462378 fliY 12365261 fliY Helicobacter pylori 83 flagellar motor switch protein YP_005785043.1 461515 D 585538 CDS YP_005785044.1 385225119 12365262 462407..462943 1 NC_017375.1 COG: COG2731; Pfam: PF04074; InterPro: IPR004375; hypothetical protein 462943 12365262 HMPREF0462_0477 Helicobacter pylori 83 hypothetical protein YP_005785044.1 462407 D 585538 CDS YP_005785045.1 385225120 12365263 462940..463437 1 NC_017375.1 COG: COG4731; hypothetical protein 463437 12365263 HMPREF0462_0478 Helicobacter pylori 83 hypothetical protein YP_005785045.1 462940 D 585538 CDS YP_005785046.1 385225121 12365264 complement(463457..463909) 1 NC_017375.1 COG: COG0735; Pfam: PF01475; InterPro: IPR002481; ferric uptake regulation protein 463909 fur 12365264 fur Helicobacter pylori 83 ferric uptake regulation protein YP_005785046.1 463457 R 585538 CDS YP_005785047.1 385225122 12365265 complement(464070..465245) 1 NC_017375.1 COG: COG2256; Pfam: PF00004; InterPro: IPR003593; ATPase 465245 12365265 HMPREF0462_0480 Helicobacter pylori 83 ATPase YP_005785047.1 464070 R 585538 CDS YP_005785048.1 385225123 12365266 complement(465242..465613) 1 NC_017375.1 COG: COG0789; Pfam: PF00376; InterPro: IPR000551; MerR family transcriptional regulator 465613 hspR 12365266 hspR Helicobacter pylori 83 MerR family transcriptional regulator YP_005785048.1 465242 R 585538 CDS YP_005785049.1 385225124 12365267 complement(465623..466489) 1 NC_017375.1 COG: COG2214; Pfam: PF00226,PF01556; InterPro: IPR015609; chaperone DnaJ 466489 dnaJ 12365267 dnaJ Helicobacter pylori 83 chaperone DnaJ YP_005785049.1 465623 R 585538 CDS YP_005785050.1 385225125 12365268 466657..467913 1 NC_017375.1 hypothetical protein 467913 12365268 HMPREF0462_0483 Helicobacter pylori 83 hypothetical protein YP_005785050.1 466657 D 585538 CDS YP_005785051.1 385225126 12365269 complement(467978..468709) 1 NC_017375.1 COG: COG0258; hypothetical protein 468709 12365269 HMPREF0462_0484 Helicobacter pylori 83 hypothetical protein YP_005785051.1 467978 R 585538 CDS YP_005785052.1 385225127 12365270 468674..468793 1 NC_017375.1 hypothetical protein 468793 12365270 HMPREF0462_0485 Helicobacter pylori 83 hypothetical protein YP_005785052.1 468674 D 585538 CDS YP_005785053.1 385225128 12365271 complement(468921..469130) 1 NC_017375.1 hypothetical protein 469130 12365271 HMPREF0462_0486 Helicobacter pylori 83 hypothetical protein YP_005785053.1 468921 R 585538 CDS YP_005785054.1 385225129 12365272 complement(469069..469965) 1 NC_017375.1 Pfam: PF00072,PF02954; InterPro: IPR001789; response regulator 469965 12365272 HMPREF0462_0487 Helicobacter pylori 83 response regulator YP_005785054.1 469069 R 585538 CDS YP_005785055.1 385225130 12365273 complement(470007..471227) 1 NC_017375.1 Pfam: PF01128,PF02542; InterPro: IPR001228; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 471227 ispDF 12365273 ispDF Helicobacter pylori 83 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_005785055.1 470007 R 585538 CDS YP_005785056.1 385225131 12365274 complement(471249..472679) 1 NC_017375.1 COG: COG0265; Pfam: PF00089,PF00595; InterPro: IPR011782; serine protease HtrA 472679 htrA 12365274 htrA Helicobacter pylori 83 serine protease HtrA YP_005785056.1 471249 R 585538 CDS YP_005785057.1 385225132 12365275 complement(472723..474165) 1 NC_017375.1 COG: COG0833; Pfam: PF00324; InterPro: IPR002293; APC family lysine-specific permease 474165 lysP 12365275 lysP Helicobacter pylori 83 APC family lysine-specific permease YP_005785057.1 472723 R 585538 CDS YP_005785058.1 385225133 12365276 complement(474361..474900) 1 NC_017375.1 COG: COG0558; Pfam: PF01066; InterPro: IPR004570; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 474900 pgsA 12365276 pgsA Helicobacter pylori 83 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_005785058.1 474361 R 585538 CDS YP_005785059.1 385225134 12365277 complement(474897..475505) 1 NC_017375.1 hypothetical protein 475505 12365277 HMPREF0462_0492 Helicobacter pylori 83 hypothetical protein YP_005785059.1 474897 R 585538 CDS YP_005785060.1 385225135 12365278 complement(475515..476303) 1 NC_017375.1 COG: COG1028; Pfam: PF00106; InterPro: IPR002198; short chain dehydrogenase/reductase family oxidoreductase 476303 hdhA 12365278 hdhA Helicobacter pylori 83 short chain dehydrogenase/reductase family oxidoreductase YP_005785060.1 475515 R 585538 CDS YP_005785061.1 385225136 12365279 complement(476300..477202) 1 NC_017375.1 COG: COG0329; Pfam: PF00701; InterPro: IPR002220; dihydrodipicolinate synthase 477202 dapA 12365279 dapA Helicobacter pylori 83 dihydrodipicolinate synthase YP_005785061.1 476300 R 585538 CDS YP_005785062.1 385225137 12365280 complement(477217..478551) 1 NC_017375.1 COG: COG0612; Pfam: PF00675,PF05193; InterPro: IPR011237; coenzyme PQQ synthesis protein E (pyrroloquinoline quinone biosynthesis protein E) 478551 pqqE 12365280 pqqE Helicobacter pylori 83 coenzyme PQQ synthesis protein E (pyrroloquinoline quinone biosynthesis protein E) YP_005785062.1 477217 R 585538 CDS YP_005785063.1 385225138 12365281 complement(478548..479603) 1 NC_017375.1 COG: COG0167; Pfam: PF01180; InterPro: IPR005719; dihydroorotate oxidase 479603 pyrD 12365281 pyrD Helicobacter pylori 83 dihydroorotate oxidase YP_005785063.1 478548 R 585538 CDS YP_005785064.1 385225139 12365282 complement(479640..481667) 1 NC_017375.1 COG: COG0855; Pfam: PF02503; InterPro: IPR003414; polyphosphate kinase 1 481667 ppk 12365282 ppk Helicobacter pylori 83 polyphosphate kinase 1 YP_005785064.1 479640 R 585538 CDS YP_005785065.1 385225140 12365284 complement(481904..483163) 1 NC_017375.1 COG: COG0732; Pfam: PF01420; type I R-M system S protein 483163 hsdS-1 12365284 hsdS-1 Helicobacter pylori 83 type I R-M system S protein YP_005785065.1 481904 R 585538 CDS YP_005785066.1 385225141 12365285 complement(483323..484786) 1 NC_017375.1 COG: COG0286; Pfam: PF02384; InterPro: IPR003356; type I restriction enzyme M protein 484786 hsdM 12365285 hsdM Helicobacter pylori 83 type I restriction enzyme M protein YP_005785066.1 483323 R 585538 CDS YP_005785067.1 385225142 12365286 complement(484779..486173) 1 NC_017375.1 COG: COG0610; type I restriction enzyme R protein 486173 hsdR 12365286 hsdR Helicobacter pylori 83 type I restriction enzyme R protein YP_005785067.1 484779 R 585538 CDS YP_005785068.1 385225143 12365287 complement(486183..487916) 1 NC_017375.1 COG: COG0610; Pfam: PF04313,PF04851; InterPro: IPR006935; type I restriction enzyme R protein 487916 hsdR2 12365287 hsdR2 Helicobacter pylori 83 type I restriction enzyme R protein YP_005785068.1 486183 R 585538 CDS YP_005785069.1 385225144 12365288 complement(487964..489859) 1 NC_017375.1 COG: COG2604; Pfam: PF01973; InterPro: IPR002826; hypothetical protein 489859 12365288 HMPREF0462_0502 Helicobacter pylori 83 hypothetical protein YP_005785069.1 487964 R 585538 CDS YP_005785070.1 385225145 12365289 complement(489885..490652) 1 NC_017375.1 hypothetical protein 490652 12365289 HMPREF0462_0503 Helicobacter pylori 83 hypothetical protein YP_005785070.1 489885 R 585538 CDS YP_005785071.1 385225146 12365290 complement(490662..491009) 1 NC_017375.1 hypothetical protein 491009 12365290 HMPREF0462_0504 Helicobacter pylori 83 hypothetical protein YP_005785071.1 490662 R 585538 CDS YP_005785072.1 385225147 12365291 complement(490978..492465) 1 NC_017375.1 hypothetical protein 492465 12365291 HMPREF0462_0505 Helicobacter pylori 83 hypothetical protein YP_005785072.1 490978 R 585538 CDS YP_005785073.1 385225148 12365292 complement(492477..492977) 1 NC_017375.1 hypothetical protein 492977 12365292 HMPREF0462_0506 Helicobacter pylori 83 hypothetical protein YP_005785073.1 492477 R 585538 CDS YP_005785074.1 385225149 12365293 complement(492962..494698) 1 NC_017375.1 COG: COG1164; Pfam: PF08439,PF01432; InterPro: IPR011977; oligoendopeptidase F 494698 pepF 12365293 pepF Helicobacter pylori 83 oligoendopeptidase F YP_005785074.1 492962 R 585538 CDS YP_005785075.1 385225150 12365294 complement(494796..496046) 1 NC_017375.1 COG: COG0475; Pfam: PF00999; InterPro: IPR006153; glutathione-regulated potassium-efflux system protein 496046 kefB 12365294 kefB Helicobacter pylori 83 glutathione-regulated potassium-efflux system protein YP_005785075.1 494796 R 585538 CDS YP_005785076.1 385225151 12365295 complement(496365..496925) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 496925 12365295 HMPREF0462_0509 Helicobacter pylori 83 outer membrane protein YP_005785076.1 496365 R 585538 CDS YP_005785077.1 385225152 12365296 497149..497424 1 NC_017375.1 molybdate ABC superfamily ATP binding cassette transporter, binding protein 497424 modA 12365296 modA Helicobacter pylori 83 molybdate ABC superfamily ATP binding cassette transporter, binding protein YP_005785077.1 497149 D 585538 CDS YP_005785078.1 385225153 12365297 497457..497648 1 NC_017375.1 COG: COG0725; molybdate ABC superfamily ATP binding cassette transporter, binding protein 497648 modA2 12365297 modA2 Helicobacter pylori 83 molybdate ABC superfamily ATP binding cassette transporter, binding protein YP_005785078.1 497457 D 585538 CDS YP_005785079.1 385225154 12365298 497912..498355 1 NC_017375.1 COG: COG4149; Pfam: PF00528; InterPro: IPR000515; molybdate ABC superfamily ATP binding cassette transporter, permease protein 498355 modB 12365298 modB Helicobacter pylori 83 molybdate ABC superfamily ATP binding cassette transporter, permease protein YP_005785079.1 497912 D 585538 CDS YP_005785080.1 385225155 12365299 498355..498585 1 NC_017375.1 COG: COG4149; molybdate ABC superfamily ATP binding cassette transporter, permease protein 498585 modB2 12365299 modB2 Helicobacter pylori 83 molybdate ABC superfamily ATP binding cassette transporter, permease protein YP_005785080.1 498355 D 585538 CDS YP_005785081.1 385225156 12365300 498582..499379 1 NC_017375.1 COG: COG1118; Pfam: PF00005; InterPro: IPR003593; molybdenum ABC superfamily ATP binding cassette transporter, ABC protein 499379 modD 12365300 modD Helicobacter pylori 83 molybdenum ABC superfamily ATP binding cassette transporter, ABC protein YP_005785081.1 498582 D 585538 CDS YP_005785082.1 385225157 12365301 complement(499465..500856) 1 NC_017375.1 COG: COG0008; Pfam: PF00749; InterPro: IPR004527; glutamate--tRNA ligase 500856 gltX 12365301 gltX Helicobacter pylori 83 glutamate--tRNA ligase YP_005785082.1 499465 R 585538 CDS YP_005785083.1 385225158 12365302 500974..501198 1 NC_017375.1 outer membrane protein 501198 12365302 HMPREF0462_0516 Helicobacter pylori 83 outer membrane protein YP_005785083.1 500974 D 585538 CDS YP_005785084.1 385225159 12365303 501201..502082 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 502082 12365303 HMPREF0462_0517 Helicobacter pylori 83 outer membrane protein YP_005785084.1 501201 D 585538 CDS YP_005785085.1 385225160 12365304 502093..503730 1 NC_017375.1 COG: COG0827; adenine specific DNA methyltransferase 503730 vspIM 12365304 vspIM Helicobacter pylori 83 adenine specific DNA methyltransferase YP_005785085.1 502093 D 585538 CDS YP_005785086.1 385225161 12365305 503696..504544 1 NC_017375.1 COG: COG0859; DD-heptosyltransferase 504544 12365305 HMPREF0462_0519 Helicobacter pylori 83 DD-heptosyltransferase YP_005785086.1 503696 D 585538 CDS YP_005785087.1 385225162 12365306 504590..506389 1 NC_017375.1 COG: COG1217; Pfam: PF00009,PF03144,PF00679; InterPro: IPR006298; GTP-binding protein TypA/BipA 506389 typA 12365306 typA Helicobacter pylori 83 GTP-binding protein TypA/BipA YP_005785087.1 504590 D 585538 CDS YP_005785088.1 385225163 12365307 506409..506774 1 NC_017375.1 Pfam: PF02086; InterPro: IPR012327; adenine specific DNA methyltransferase 506774 mfoKI 12365307 mfoKI Helicobacter pylori 83 adenine specific DNA methyltransferase YP_005785088.1 506409 D 585538 CDS YP_005785089.1 385225164 12365308 506823..507335 1 NC_017375.1 COG: COG0338; Pfam: PF02086; site-specific type II DNA methyltransferase 507335 12365308 HMPREF0462_0522 Helicobacter pylori 83 site-specific type II DNA methyltransferase YP_005785089.1 506823 D 585538 CDS YP_005785090.1 385225165 12365309 507338..507946 1 NC_017375.1 type II restriction endonuclease 507946 12365309 HMPREF0462_0523 Helicobacter pylori 83 type II restriction endonuclease YP_005785090.1 507338 D 585538 CDS YP_005785091.1 385225166 12365310 complement(508182..509126) 1 NC_017375.1 COG: COG0753; InterPro: IPR011614; catalase like protein 509126 12365310 HMPREF0462_0524 Helicobacter pylori 83 catalase like protein YP_005785091.1 508182 R 585538 CDS YP_005785092.1 385225167 12365311 509408..510994 1 NC_017375.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 510994 hofC 12365311 hofC Helicobacter pylori 83 hof-family outer membrane protein YP_005785092.1 509408 D 585538 CDS YP_005785093.1 385225168 12365312 511020..512462 1 NC_017375.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 512462 hofD 12365312 hofD Helicobacter pylori 83 hof-family outer membrane protein YP_005785093.1 511020 D 585538 CDS YP_005785094.1 385225169 12365313 512765..513202 1 NC_017375.1 hypothetical protein 513202 12365313 HMPREF0462_0527 Helicobacter pylori 83 hypothetical protein YP_005785094.1 512765 D 585538 CDS YP_005785095.1 385225170 12365314 513195..513323 1 NC_017375.1 hypothetical protein 513323 12365314 HMPREF0462_0528 Helicobacter pylori 83 hypothetical protein YP_005785095.1 513195 D 585538 CDS YP_005785096.1 385225171 12365315 513388..513696 1 NC_017375.1 hypothetical protein 513696 12365315 HMPREF0462_0529 Helicobacter pylori 83 hypothetical protein YP_005785096.1 513388 D 585538 CDS YP_005785097.1 385225172 12365316 complement(514109..514834) 1 NC_017375.1 COG: COG1432; hypothetical protein 514834 12365316 HMPREF0462_0530 Helicobacter pylori 83 hypothetical protein YP_005785097.1 514109 R 585538 CDS YP_005785098.1 385225173 12365317 514942..515448 1 NC_017375.1 COG: COG0817; Pfam: PF02075; InterPro: IPR002176; crossover junction endoribonuclease subunit C 515448 ruvC 12365317 ruvC Helicobacter pylori 83 crossover junction endoribonuclease subunit C YP_005785098.1 514942 D 585538 CDS YP_005785099.1 385225174 12365318 complement(515460..517835) 1 NC_017375.1 COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR000531; iron-regulated outer membrane protein 517835 frpB 12365318 frpB Helicobacter pylori 83 iron-regulated outer membrane protein YP_005785099.1 515460 R 585538 CDS YP_005785100.1 385225175 12365319 518157..519683 1 NC_017375.1 COG: COG0753; Pfam: PF00199; InterPro: IPR011614; catalase 519683 katA 12365319 katA Helicobacter pylori 83 catalase YP_005785100.1 518157 D 585538 CDS YP_005785101.1 385225176 12365320 519834..520709 1 NC_017375.1 KapA protein 520709 kapA 12365320 kapA Helicobacter pylori 83 KapA protein YP_005785101.1 519834 D 585538 CDS YP_005785102.1 385225177 12365321 520794..521009 1 NC_017375.1 hypothetical protein 521009 12365321 HMPREF0462_0535 Helicobacter pylori 83 hypothetical protein YP_005785102.1 520794 D 585538 CDS YP_005785103.1 385225178 12365322 complement(521067..521396) 1 NC_017375.1 COG: COG2824; Pfam: PF08274,PF03831; InterPro: IPR004624; alkylphosphonate uptake protein 521396 12365322 HMPREF0462_0536 Helicobacter pylori 83 alkylphosphonate uptake protein YP_005785103.1 521067 R 585538 CDS YP_005785104.1 385225179 12365323 521716..522450 1 NC_017375.1 COG: COG2134; Pfam: PF02611; InterPro: IPR003763; CDP-diacylglycerol diphosphatase 522450 cdh 12365323 cdh Helicobacter pylori 83 CDP-diacylglycerol diphosphatase YP_005785104.1 521716 D 585538 CDS YP_005785105.1 385225180 12365324 522663..524819 1 NC_017375.1 COG: COG1749; Pfam: PF00460,PF07196,PF07559,PF06429; InterPro: IPR012835; flagellar hook protein FlgE 524819 flgE 12365324 flgE Helicobacter pylori 83 flagellar hook protein FlgE YP_005785105.1 522663 D 585538 CDS YP_005785106.1 385225181 12365325 524878..525231 1 NC_017375.1 COG: COG0375; Pfam: PF01155; InterPro: IPR000688; hydrogenase nickel incorporation protein HypA 525231 hypA 12365325 hypA Helicobacter pylori 83 hydrogenase nickel incorporation protein HypA YP_005785106.1 524878 D 585538 CDS YP_005785107.1 385225182 12365326 525235..525696 1 NC_017375.1 hypothetical protein 525696 12365326 HMPREF0462_0540 Helicobacter pylori 83 hypothetical protein YP_005785107.1 525235 D 585538 CDS YP_005785108.1 385225183 12365327 525696..526778 1 NC_017375.1 COG: COG0763; Pfam: PF02684; InterPro: IPR003835; lipid-A-disaccharide synthase 526778 lpxB 12365327 lpxB Helicobacter pylori 83 lipid-A-disaccharide synthase YP_005785108.1 525696 D 585538 CDS YP_005785109.1 385225184 12365328 526819..527313 1 NC_017375.1 COG: COG0782; Pfam: PF03449,PF01272; InterPro: IPR001437; transcription elongation factor GreA 527313 greA 12365328 greA Helicobacter pylori 83 transcription elongation factor GreA YP_005785109.1 526819 D 585538 CDS YP_005785110.1 385225185 12365329 527303..527740 1 NC_017375.1 COG: COG0756; Pfam: PF00692; InterPro: IPR008181; deoxyuridine 5'triphosphate nucleotidohydrolase 527740 dut 12365329 dut Helicobacter pylori 83 deoxyuridine 5'triphosphate nucleotidohydrolase YP_005785110.1 527303 D 585538 CDS YP_005785111.1 385225186 12365330 527737..528393 1 NC_017375.1 hypothetical protein 528393 12365330 HMPREF0462_0544 Helicobacter pylori 83 hypothetical protein YP_005785111.1 527737 D 585538 CDS YP_005785112.1 385225187 12365331 528398..530044 1 NC_017375.1 plasminogen-binding protein PgbB 530044 12365331 HMPREF0462_0545 Helicobacter pylori 83 plasminogen-binding protein PgbB YP_005785112.1 528398 D 585538 CDS YP_005785113.1 385225188 12365332 530049..530714 1 NC_017375.1 COG: COG1521; Pfam: PF03309; InterPro: IPR004619; type III pantothenate kinase 530714 coaX 12365332 coaX Helicobacter pylori 83 type III pantothenate kinase YP_005785113.1 530049 D 585538 CDS YP_005785114.1 385225189 12365333 530705..531442 1 NC_017375.1 COG: COG2836; hypothetical protein 531442 12365333 HMPREF0462_0547 Helicobacter pylori 83 hypothetical protein YP_005785114.1 530705 D 585538 CDS YP_005785115.1 385225190 12365334 531429..531953 1 NC_017375.1 COG: COG0241; InterPro: IPR004446; D,D-heptose 1,7-bisphosphate phosphatase 531953 12365334 HMPREF0462_0548 Helicobacter pylori 83 D,D-heptose 1,7-bisphosphate phosphatase YP_005785115.1 531429 D 585538 CDS YP_005785116.1 385225191 12365335 531962..532954 1 NC_017375.1 COG: COG0451; Pfam: PF01370; InterPro: IPR011912; ADP-glyceromanno-heptose 6-epimerase 532954 rfaD 12365335 rfaD Helicobacter pylori 83 ADP-glyceromanno-heptose 6-epimerase YP_005785116.1 531962 D 585538 CDS YP_005785117.1 385225192 12365336 532951..534336 1 NC_017375.1 COG: COG2870; Pfam: PF00294,PF01467; InterPro: IPR011913; bifunctional protein hldE (D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate adenosyltransferase) 534336 hldE 12365336 hldE Helicobacter pylori 83 bifunctional protein hldE (D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate adenosyltransferase) YP_005785117.1 532951 D 585538 CDS YP_005785118.1 385225193 12365337 534329..534907 1 NC_017375.1 COG: COG0279; Pfam: PF01380; InterPro: IPR004515; phosphoheptose isomerase 534907 gmhA 12365337 gmhA Helicobacter pylori 83 phosphoheptose isomerase YP_005785118.1 534329 D 585538 CDS YP_005785119.1 385225194 12365338 complement(534917..535090) 1 NC_017375.1 hypothetical protein 535090 12365338 HMPREF0462_0552 Helicobacter pylori 83 hypothetical protein YP_005785119.1 534917 R 585538 CDS YP_005785120.1 385225195 12365339 complement(535074..536075) 1 NC_017375.1 COG: COG0516; Pfam: PF00478; InterPro: IPR001093; GMP reductase 536075 guaC 12365339 guaC Helicobacter pylori 83 GMP reductase YP_005785120.1 535074 R 585538 CDS YP_005785121.1 385225196 12365340 536301..537902 1 NC_017375.1 COG: COG0488; Pfam: PF00005; InterPro: IPR003439; ABC superfamily ATP binding cassette transporter, ABC protein 537902 12365340 HMPREF0462_0554 Helicobacter pylori 83 ABC superfamily ATP binding cassette transporter, ABC protein YP_005785121.1 536301 D 585538 CDS YP_005785122.1 385225197 12365341 537899..538498 1 NC_017375.1 COG: COG2958; Pfam: PF04373; InterPro: IPR007468; hypothetical protein 538498 12365341 HMPREF0462_0555 Helicobacter pylori 83 hypothetical protein YP_005785122.1 537899 D 585538 CDS YP_005785123.1 385225198 12365342 538488..538826 1 NC_017375.1 Pfam: PF04373; InterPro: IPR007468; hypothetical protein 538826 12365342 HMPREF0462_0556 Helicobacter pylori 83 hypothetical protein YP_005785123.1 538488 D 585538 CDS YP_005785124.1 385225199 12365343 complement(538843..539529) 1 NC_017375.1 COG: COG0671; Pfam: PF01569; InterPro: IPR016118; phosphatidic acid phosphatase 539529 12365343 HMPREF0462_0557 Helicobacter pylori 83 phosphatidic acid phosphatase YP_005785124.1 538843 R 585538 CDS YP_005785125.1 385225200 12365344 539546..541297 1 NC_017375.1 COG: COG0286; Pfam: PF02384; InterPro: IPR004546; type I restriction-modification system 541297 hsdM2 12365344 hsdM2 Helicobacter pylori 83 type I restriction-modification system YP_005785125.1 539546 D 585538 CDS YP_005785126.1 385225201 12365345 541290..541799 1 NC_017375.1 COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I restrictionenzyme 541799 hsdS 12365345 hsdS Helicobacter pylori 83 type I restrictionenzyme YP_005785126.1 541290 D 585538 CDS YP_005785127.1 385225202 12365346 541835..542545 1 NC_017375.1 COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I R-M system S protein 542545 hsdS2 12365346 hsdS2 Helicobacter pylori 83 type I R-M system S protein YP_005785127.1 541835 D 585538 CDS YP_005785128.1 385225203 12365347 542941..545565 1 NC_017375.1 COG: COG0610; Pfam: PF04313,PF04851; InterPro: IPR004473; type I site-specific deoxyribonuclease 545565 hsdR3 12365347 hsdR3 Helicobacter pylori 83 type I site-specific deoxyribonuclease YP_005785128.1 542941 D 585538 CDS YP_005785129.1 385225204 12365348 545658..546437 1 NC_017375.1 COG: COG2145; Pfam: PF02110; InterPro: IPR000417; hydroxyethylthiazole kinase 546437 thiM 12365348 thiM Helicobacter pylori 83 hydroxyethylthiazole kinase YP_005785129.1 545658 D 585538 CDS YP_005785130.1 385225205 12365349 546434..547243 1 NC_017375.1 COG: COG0351; Pfam: PF08543; InterPro: IPR004399; phosphomethylpyrimidine kinase 547243 thiD 12365349 thiD Helicobacter pylori 83 phosphomethylpyrimidine kinase YP_005785130.1 546434 D 585538 CDS YP_005785131.1 385225206 12365350 547224..547895 1 NC_017375.1 COG: COG0352; Pfam: PF02581; InterPro: IPR013785; thiamine-phosphate diphosphorylase 547895 thiE 12365350 thiE Helicobacter pylori 83 thiamine-phosphate diphosphorylase YP_005785131.1 547224 D 585538 CDS YP_005785132.1 385225207 12365351 complement(547920..548657) 1 NC_017375.1 hypothetical protein 548657 12365351 HMPREF0462_0565 Helicobacter pylori 83 hypothetical protein YP_005785132.1 547920 R 585538 CDS YP_005785133.1 385225208 12365352 complement(548657..549934) 1 NC_017375.1 COG: COG0452; Pfam: PF02441,PF04127; InterPro: IPR005252; coenzyme A biosynthesis bifunctional protein CoaBC 549934 coaBC 12365352 coaBC Helicobacter pylori 83 coenzyme A biosynthesis bifunctional protein CoaBC YP_005785133.1 548657 R 585538 CDS YP_005785134.1 385225209 12365353 complement(549931..550914) 1 NC_017375.1 COG: COG1086; Pfam: PF02719; InterPro: IPR003869; UDP-N-acetylglucosamine 4,6-dehydratase 550914 pseB 12365353 pseB Helicobacter pylori 83 UDP-N-acetylglucosamine 4,6-dehydratase YP_005785134.1 549931 R 585538 CDS YP_005785135.1 385225210 12365354 complement(550929..552692) 1 NC_017375.1 COG: COG2067; Pfam: PF03349; InterPro: IPR005017; outer membrane protein P1 552692 ompP 12365354 ompP Helicobacter pylori 83 outer membrane protein P1 YP_005785135.1 550929 R 585538 CDS YP_005785136.1 385225211 12365355 complement(552689..553270) 1 NC_017375.1 hypothetical protein 553270 12365355 HMPREF0462_0569 Helicobacter pylori 83 hypothetical protein YP_005785136.1 552689 R 585538 CDS YP_005785137.1 385225212 12365356 complement(553326..553931) 1 NC_017375.1 COG: COG3018; Pfam: PF04164; InterPro: IPR007293; hypothetical protein 553931 12365356 HMPREF0462_0570 Helicobacter pylori 83 hypothetical protein YP_005785137.1 553326 R 585538 CDS YP_005785138.1 385225213 12365358 complement(554605..554889) 1 NC_017375.1 COG: COG0776; Pfam: PF00216; InterPro: IPR000119; DNA-binding protein HU 554889 hup 12365358 hup Helicobacter pylori 83 DNA-binding protein HU YP_005785138.1 554605 R 585538 CDS YP_005785139.1 385225214 12365359 complement(555032..556414) 1 NC_017375.1 COG: COG1160; Pfam: PF01926; InterPro: IPR005225; ribosome-associated GTPase EngA 556414 engA 12365359 engA Helicobacter pylori 83 ribosome-associated GTPase EngA YP_005785139.1 555032 R 585538 CDS YP_005785140.1 385225215 12365360 556491..557378 1 NC_017375.1 hypothetical protein 557378 12365360 HMPREF0462_0573 Helicobacter pylori 83 hypothetical protein YP_005785140.1 556491 D 585538 CDS YP_005785141.1 385225216 12365361 557467..558255 1 NC_017375.1 COG: COG0421; Pfam: PF01564; InterPro: IPR001045; spermidine synthase 558255 speE 12365361 speE Helicobacter pylori 83 spermidine synthase YP_005785141.1 557467 D 585538 CDS YP_005785142.1 385225217 12365362 558257..558847 1 NC_017375.1 COG: COG0237; Pfam: PF01121; InterPro: IPR001977; dephospho-CoA kinase 558847 coaE 12365362 coaE Helicobacter pylori 83 dephospho-CoA kinase YP_005785142.1 558257 D 585538 CDS YP_005785143.1 385225218 12365363 558906..560267 1 NC_017375.1 COG: COG0154; Pfam: PF01425; InterPro: IPR004412; glutamyl-tRNA(Gln) amidotransferase subunit A 560267 gatA 12365363 gatA Helicobacter pylori 83 glutamyl-tRNA(Gln) amidotransferase subunit A YP_005785143.1 558906 D 585538 CDS YP_005785144.1 385225219 12365364 560277..561722 1 NC_017375.1 COG: COG0516; Pfam: PF00478,PF00571; InterPro: IPR013785; inosine-5'-monophosphate dehydrogenase 561722 guaB 12365364 guaB Helicobacter pylori 83 inosine-5'-monophosphate dehydrogenase YP_005785144.1 560277 D 585538 CDS YP_005785145.1 385225220 12365365 561832..562512 1 NC_017375.1 COG: COG0356; Pfam: PF00119; InterPro: IPR000568; ATP synthase F0 subunit A 562512 atpB 12365365 atpB Helicobacter pylori 83 ATP synthase F0 subunit A YP_005785145.1 561832 D 585538 CDS YP_005785146.1 385225221 12365366 562828..563076 1 NC_017375.1 COG: COG0724; Pfam: PF00076; InterPro: IPR015465; peptidyl-prolyl cis-trans isomerase 563076 12365366 HMPREF0462_0579 Helicobacter pylori 83 peptidyl-prolyl cis-trans isomerase YP_005785146.1 562828 D 585538 CDS YP_005785147.1 385225222 12365367 complement(563282..564103) 1 NC_017375.1 COG: COG3306; Pfam: PF01755; InterPro: IPR002654; lipooligosaccharide 5G8 epitope biosynthesis-associated protein 564103 lex2B 12365367 lex2B Helicobacter pylori 83 lipooligosaccharide 5G8 epitope biosynthesis-associated protein YP_005785147.1 563282 R 585538 CDS YP_005785148.1 385225223 12365368 complement(564270..565205) 1 NC_017375.1 COG: COG0492; Pfam: PF07992,PF00070; InterPro: IPR005982; thioredoxin-disulfide reductase 565205 trxB 12365368 trxB Helicobacter pylori 83 thioredoxin-disulfide reductase YP_005785148.1 564270 R 585538 CDS YP_005785149.1 385225224 12365369 complement(565211..565531) 1 NC_017375.1 COG: COG0526; Pfam: PF00085; InterPro: IPR012335; thioredoxin 565531 trxA 12365369 trxA Helicobacter pylori 83 thioredoxin YP_005785149.1 565211 R 585538 CDS YP_005785150.1 385225225 12365370 complement(565620..565964) 1 NC_017375.1 COG: COG0792; Pfam: PF02021; InterPro: IPR003509; endonuclease 565964 12365370 HMPREF0462_0583 Helicobacter pylori 83 endonuclease YP_005785150.1 565620 R 585538 CDS YP_005785151.1 385225226 12365371 complement(565965..567230) 1 NC_017375.1 COG: COG0460; Pfam: PF03447,PF00742,PF01842; InterPro: IPR001342; homoserine dehydrogenase 567230 hom 12365371 hom Helicobacter pylori 83 homoserine dehydrogenase YP_005785151.1 565965 R 585538 CDS YP_005785152.1 385225227 12365372 complement(567241..569025) 1 NC_017375.1 COG: COG0322; Pfam: PF01541,PF02151,PF08459; InterPro: IPR004791; excision endonuclease subunit UvrC 569025 uvrC 12365372 uvrC Helicobacter pylori 83 excision endonuclease subunit UvrC YP_005785152.1 567241 R 585538 CDS YP_005785153.1 385225228 12365373 complement(569026..569487) 1 NC_017375.1 hypothetical protein 569487 12365373 HMPREF0462_0586 Helicobacter pylori 83 hypothetical protein YP_005785153.1 569026 R 585538 CDS YP_005785154.1 385225229 12365374 569479..569658 1 NC_017375.1 hypothetical protein 569658 12365374 HMPREF0462_0587 Helicobacter pylori 83 hypothetical protein YP_005785154.1 569479 D 585538 CDS YP_005785155.1 385225230 12365375 complement(569670..570311) 1 NC_017375.1 COG: COG1125; Pfam: PF00005; InterPro: IPR003593; osmoprotection protein 570311 proV 12365375 proV Helicobacter pylori 83 osmoprotection protein YP_005785155.1 569670 R 585538 CDS YP_005785156.1 385225231 12365376 complement(570313..571974) 1 NC_017375.1 COG: COG1732; Pfam: PF00528,PF04069; InterPro: IPR007210; osmoprotection protein 571974 proWX 12365376 proWX Helicobacter pylori 83 osmoprotection protein YP_005785156.1 570313 R 585538 CDS YP_005785157.1 385225232 12365377 complement(572154..572591) 1 NC_017375.1 hypothetical protein 572591 12365377 HMPREF0462_0590 Helicobacter pylori 83 hypothetical protein YP_005785157.1 572154 R 585538 CDS YP_005785158.1 385225233 12365378 complement(572595..573362) 1 NC_017375.1 COG: COG1360; Pfam: PF00691; InterPro: IPR006665; flagellar motor protein MotB 573362 motB 12365378 motB Helicobacter pylori 83 flagellar motor protein MotB YP_005785158.1 572595 R 585538 CDS YP_005785159.1 385225234 12365379 complement(573365..574138) 1 NC_017375.1 COG: COG1291; Pfam: PF01618; InterPro: IPR002898; flagellar motor protein MotA 574138 motA 12365379 motA Helicobacter pylori 83 flagellar motor protein MotA YP_005785159.1 573365 R 585538 CDS YP_005785160.1 385225235 12365380 complement(574154..574921) 1 NC_017375.1 COG: COG0476; Pfam: PF00899,PF05237; InterPro: IPR016040; ThiF family protein 574921 thiF 12365380 thiF Helicobacter pylori 83 ThiF family protein YP_005785160.1 574154 R 585538 CDS YP_005785161.1 385225236 12365381 complement(574922..575539) 1 NC_017375.1 COG: COG0491; Pfam: PF00753; InterPro: IPR001279; metallo-beta-lactamase 575539 12365381 HMPREF0462_0594 Helicobacter pylori 83 metallo-beta-lactamase YP_005785161.1 574922 R 585538 CDS YP_005785162.1 385225237 12365382 575664..576671 1 NC_017375.1 COG: COG1565; hypothetical protein 576671 12365382 HMPREF0462_0595 Helicobacter pylori 83 hypothetical protein YP_005785162.1 575664 D 585538 CDS YP_005785163.1 385225238 12365383 577111..577437 1 NC_017375.1 hypothetical protein 577437 12365383 HMPREF0462_0596 Helicobacter pylori 83 hypothetical protein YP_005785163.1 577111 D 585538 CDS YP_005785164.1 385225239 12365384 577416..578018 1 NC_017375.1 COG: COG0742; Pfam: PF03602; InterPro: IPR004398; RsmD family RNA methyltransferase 578018 12365384 HMPREF0462_0597 Helicobacter pylori 83 RsmD family RNA methyltransferase YP_005785164.1 577416 D 585538 CDS YP_005785165.1 385225240 12365385 578027..578578 1 NC_017375.1 COG: COG1580; Pfam: PF03748; InterPro: IPR005503; flagellar basal body-associated protein FliL 578578 fliL 12365385 fliL Helicobacter pylori 83 flagellar basal body-associated protein FliL YP_005785165.1 578027 D 585538 CDS YP_005785166.1 385225241 12365386 578585..578941 1 NC_017375.1 COG: COG0736; Pfam: PF01648; InterPro: IPR002582; holo-[acyl-carrier-protein] synthase 578941 acpS 12365386 acpS Helicobacter pylori 83 holo-[acyl-carrier-protein] synthase YP_005785166.1 578585 D 585538 CDS YP_005785167.1 385225242 12365387 579166..581541 1 NC_017375.1 COG: COG4772; Pfam: PF07715,PF00593; InterPro: IPR000531; iron(III) dicitrate transporter 581541 fecA 12365387 fecA Helicobacter pylori 83 iron(III) dicitrate transporter YP_005785167.1 579166 D 585538 CDS YP_005785168.1 385225243 12365388 complement(581552..582166) 1 NC_017375.1 COG: COG1451; Pfam: PF01863; InterPro: IPR002725; metalloprotease 582166 12365388 HMPREF0462_0601 Helicobacter pylori 83 metalloprotease YP_005785168.1 581552 R 585538 CDS YP_005785169.1 385225244 12365389 582248..583090 1 NC_017375.1 COG: COG3306; Pfam: PF01755; InterPro: IPR002654; lipooligosaccharide 5G8 epitope biosynthesis-associated protein 583090 lex2B2 12365389 lex2B2 Helicobacter pylori 83 lipooligosaccharide 5G8 epitope biosynthesis-associated protein YP_005785169.1 582248 D 585538 CDS YP_005785170.1 385225245 12365390 complement(583164..584006) 1 NC_017375.1 type 11 methyltransferase 584006 12365390 HMPREF0462_0603 Helicobacter pylori 83 type 11 methyltransferase YP_005785170.1 583164 R 585538 CDS YP_005785171.1 385225246 12365391 complement(584081..584221) 1 NC_017375.1 hypothetical protein 584221 12365391 HMPREF0462_0604 Helicobacter pylori 83 hypothetical protein YP_005785171.1 584081 R 585538 CDS YP_005785172.1 385225247 12365392 584374..585408 1 NC_017375.1 COG: COG0108; Pfam: PF00926; InterPro: IPR000422; 3,4-dihydroxy-2-butanone 4-phosphate synthase 585408 ribB 12365392 ribB Helicobacter pylori 83 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005785172.1 584374 D 585538 CDS YP_005785173.1 385225248 12365393 585495..586334 1 NC_017375.1 hypothetical protein 586334 12365393 HMPREF0462_0606 Helicobacter pylori 83 hypothetical protein YP_005785173.1 585495 D 585538 CDS YP_005785174.1 385225249 12365394 586383..587030 1 NC_017375.1 COG: COG0807; Pfam: PF00925; InterPro: IPR000926; GTP cyclohydrolase II 587030 ribA 12365394 ribA Helicobacter pylori 83 GTP cyclohydrolase II YP_005785174.1 586383 D 585538 CDS YP_005785175.1 385225250 12365395 587101..587325 1 NC_017375.1 COG: COG1977; Pfam: PF02597; InterPro: IPR003749; molybdenum cofactor biosynthesis protein small subunit 587325 moaD 12365395 moaD Helicobacter pylori 83 molybdenum cofactor biosynthesis protein small subunit YP_005785175.1 587101 D 585538 CDS YP_005785176.1 385225251 12365396 587326..587763 1 NC_017375.1 COG: COG0314; Pfam: PF02391; InterPro: IPR003448; molybdenum cofactorbiosynthesis protein large subunit 587763 moaE 12365396 moaE Helicobacter pylori 83 molybdenum cofactorbiosynthesis protein large subunit YP_005785176.1 587326 D 585538 CDS YP_005785177.1 385225252 12365397 587776..588306 1 NC_017375.1 COG: COG0521; Pfam: PF00994; InterPro: IPR001453; 4a-hydroxytetrahydrobiopterin dehydratase 588306 pcd 12365397 pcd Helicobacter pylori 83 4a-hydroxytetrahydrobiopterin dehydratase YP_005785177.1 587776 D 585538 CDS YP_005785178.1 385225253 12365398 588315..588791 1 NC_017375.1 COG: COG0315; Pfam: PF01967; InterPro: IPR002820; molybdenum cofactor biosynthesis protein C 588791 moaC 12365398 moaC Helicobacter pylori 83 molybdenum cofactor biosynthesis protein C YP_005785178.1 588315 D 585538 CDS YP_005785179.1 385225254 12365399 588910..589692 1 NC_017375.1 Pfam: PF05211; InterPro: IPR007876; neuraminyllactose-binding hemagglutinin 589692 12365399 HMPREF0462_0612 Helicobacter pylori 83 neuraminyllactose-binding hemagglutinin YP_005785179.1 588910 D 585538 CDS YP_005785180.1 385225255 12365400 589721..590557 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 590557 12365400 HMPREF0462_0613 Helicobacter pylori 83 outer membrane protein YP_005785180.1 589721 D 585538 CDS YP_005785181.1 385225256 12365401 590669..592024 1 NC_017375.1 COG: COG0544; Pfam: PF05697,PF00254,PF05698; InterPro: IPR005215; trigger factor 592024 tig 12365401 tig Helicobacter pylori 83 trigger factor YP_005785181.1 590669 D 585538 CDS YP_005785182.1 385225257 12365402 592045..592632 1 NC_017375.1 COG: COG0740; Pfam: PF00574; InterPro: IPR001907; ATP-dependent Clp protease proteolytic subunit 592632 clpP 12365402 clpP Helicobacter pylori 83 ATP-dependent Clp protease proteolytic subunit YP_005785182.1 592045 D 585538 CDS YP_005785183.1 385225258 12365403 592637..593161 1 NC_017375.1 COG: COG0242; Pfam: PF01327; InterPro: IPR000181; peptide deformylase 593161 def 12365403 def Helicobacter pylori 83 peptide deformylase YP_005785183.1 592637 D 585538 CDS YP_005785184.1 385225259 12365404 593167..594687 1 NC_017375.1 COG: COG0606; Pfam: PF01078; InterPro: IPR004482; Mg chelatase-like protein 594687 12365404 HMPREF0462_0617 Helicobacter pylori 83 Mg chelatase-like protein YP_005785184.1 593167 D 585538 CDS YP_005785185.1 385225260 12365405 594712..596772 1 NC_017375.1 COG: COG2217; Pfam: PF00122,PF00702; InterPro: IPR001757; P-ATPase superfamily P-type ATPase cadmium transporter 596772 cadA 12365405 cadA Helicobacter pylori 83 P-ATPase superfamily P-type ATPase cadmium transporter YP_005785185.1 594712 D 585538 CDS YP_005785186.1 385225261 12365406 596808..597413 1 NC_017375.1 COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I restriction modification DNA specificity family protein 597413 12365406 HMPREF0462_0619 Helicobacter pylori 83 type I restriction modification DNA specificity family protein YP_005785186.1 596808 D 585538 CDS YP_005785187.1 385225262 12365407 complement(597709..599208) 1 NC_017375.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 599208 hofF 12365407 hofF Helicobacter pylori 83 hof-family outer membrane protein YP_005785187.1 597709 R 585538 CDS YP_005785188.1 385225263 12365408 complement(599487..600719) 1 NC_017375.1 COG: COG4591; Pfam: PF02687; InterPro: IPR003838; ABC superfamily ATP binding cassette transporter, ABC protein 600719 12365408 HMPREF0462_0621 Helicobacter pylori 83 ABC superfamily ATP binding cassette transporter, ABC protein YP_005785188.1 599487 R 585538 CDS YP_005785189.1 385225264 12365409 complement(600709..603306) 1 NC_017375.1 COG: COG0653; Pfam: PF07517,PF01043,PF00271,PF07516,PF02810; InterPro: IPR000185; preprotein translocase subunit SecA 603306 secA 12365409 secA Helicobacter pylori 83 preprotein translocase subunit SecA YP_005785189.1 600709 R 585538 CDS YP_005785190.1 385225265 12365410 603454..604008 1 NC_017375.1 COG: COG2834; Pfam: PF03548; InterPro: IPR004564; outer-membrane lipoprotein carrier protein 604008 lolA 12365410 lolA Helicobacter pylori 83 outer-membrane lipoprotein carrier protein YP_005785190.1 603454 D 585538 CDS YP_005785191.1 385225266 12365412 604493..605020 1 NC_017375.1 hypothetical protein 605020 12365412 HMPREF0462_0624 Helicobacter pylori 83 hypothetical protein YP_005785191.1 604493 D 585538 CDS YP_005785192.1 385225267 12365413 complement(605027..606394) 1 NC_017375.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 606394 hofE2 12365413 hofE2 Helicobacter pylori 83 hof-family outer membrane protein YP_005785192.1 605027 R 585538 CDS YP_005785193.1 385225268 12365414 complement(606496..607785) 1 NC_017375.1 COG: COG5659; hypothetical protein 607785 12365414 HMPREF0462_0626 Helicobacter pylori 83 hypothetical protein YP_005785193.1 606496 R 585538 CDS YP_005785194.1 385225269 12365415 complement(608049..608321) 1 NC_017375.1 hypothetical protein 608321 12365415 HMPREF0462_0627 Helicobacter pylori 83 hypothetical protein YP_005785194.1 608049 R 585538 CDS YP_005785195.1 385225270 12365416 complement(608397..610958) 1 NC_017375.1 COG: COG1049; Pfam: PF06434,PF00330; InterPro: IPR004406; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 610958 acnB 12365416 acnB Helicobacter pylori 83 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_005785195.1 608397 R 585538 CDS YP_005785196.1 385225271 12365417 611095..611778 1 NC_017375.1 COG: COG1427; Pfam: PF02621; InterPro: IPR003773; hypothetical protein 611778 12365417 HMPREF0462_0629 Helicobacter pylori 83 hypothetical protein YP_005785196.1 611095 D 585538 CDS YP_005785197.1 385225272 12365418 611887..612609 1 NC_017375.1 COG: COG0528; Pfam: PF00696; InterPro: IPR001048; UMP kinase 612609 pyrH 12365418 pyrH Helicobacter pylori 83 UMP kinase YP_005785197.1 611887 D 585538 CDS YP_005785198.1 385225273 12365419 612652..612876 1 NC_017375.1 COG: COG1758; Pfam: PF01192; InterPro: IPR006110; DNA-directed RNA polymerase subunit omega 612876 rpoZ 12365419 rpoZ Helicobacter pylori 83 DNA-directed RNA polymerase subunit omega YP_005785198.1 612652 D 585538 CDS YP_005785199.1 385225274 12365420 612863..615190 1 NC_017375.1 COG: COG0317; Pfam: PF01966,PF04607,PF02824; InterPro: IPR004811; penta-phosphate guanosine-3'-pyrophosphohydrolase 615190 spoT 12365420 spoT Helicobacter pylori 83 penta-phosphate guanosine-3'-pyrophosphohydrolase YP_005785199.1 612863 D 585538 CDS YP_005785200.1 385225275 12365421 615214..616422 1 NC_017375.1 COG: COG0162; Pfam: PF00579,PF01479; InterPro: IPR002307; tyrosine--tRNA ligase 616422 tyrS 12365421 tyrS Helicobacter pylori 83 tyrosine--tRNA ligase YP_005785200.1 615214 D 585538 CDS YP_005785201.1 385225276 12365422 616433..617524 1 NC_017375.1 COG: COG2070; Pfam: PF03060; InterPro: IPR004136; 2-nitropropane dioxygenase 617524 12365422 HMPREF0462_0634 Helicobacter pylori 83 2-nitropropane dioxygenase YP_005785201.1 616433 D 585538 CDS YP_005785202.1 385225277 12365423 617531..618943 1 NC_017375.1 COG: COG0860; Pfam: PF01520; InterPro: IPR002508; N-acetylmuramoyl-L-alanine amidase 618943 amiD 12365423 amiD Helicobacter pylori 83 N-acetylmuramoyl-L-alanine amidase YP_005785202.1 617531 D 585538 CDS YP_005785203.1 385225278 12365424 618951..619688 1 NC_017375.1 hypothetical protein 619688 12365424 HMPREF0462_0636 Helicobacter pylori 83 hypothetical protein YP_005785203.1 618951 D 585538 CDS YP_005785204.1 385225279 12365425 complement(619775..620851) 1 NC_017375.1 COG: COG1377; Pfam: PF01312; InterPro: IPR006136; flagellar biosynthetic protein FlhB 620851 flhB 12365425 flhB Helicobacter pylori 83 flagellar biosynthetic protein FlhB YP_005785204.1 619775 R 585538 CDS YP_005785205.1 385225280 12365426 complement(620844..621449) 1 NC_017375.1 COG: COG0746; molybdopterin-guanine dinucleotide biosynthesis protein MobA 621449 mobA 12365426 mobA Helicobacter pylori 83 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_005785205.1 620844 R 585538 CDS YP_005785206.1 385225281 12365427 621619..621759 1 NC_017375.1 molybdenum cofactor biosynthesis protein A 621759 12365427 HMPREF0462_0639 Helicobacter pylori 83 molybdenum cofactor biosynthesis protein A YP_005785206.1 621619 D 585538 CDS YP_005785207.1 385225282 12365428 621756..622376 1 NC_017375.1 COG: COG2896; Pfam: PF04055,PF06463; InterPro: IPR010505; molybdenum cofactor biosynthesis protein A 622376 moaA 12365428 moaA Helicobacter pylori 83 molybdenum cofactor biosynthesis protein A YP_005785207.1 621756 D 585538 CDS YP_005785208.1 385225283 12365429 622764..622892 1 NC_017375.1 hypothetical protein 622892 12365429 HMPREF0462_0641 Helicobacter pylori 83 hypothetical protein YP_005785208.1 622764 D 585538 CDS YP_005785209.1 385225284 12365430 622879..623166 1 NC_017375.1 hypothetical protein 623166 12365430 HMPREF0462_0642 Helicobacter pylori 83 hypothetical protein YP_005785209.1 622879 D 585538 CDS YP_005785210.1 385225285 12365431 623247..623429 1 NC_017375.1 hypothetical protein 623429 12365431 HMPREF0462_0643 Helicobacter pylori 83 hypothetical protein YP_005785210.1 623247 D 585538 CDS YP_005785211.1 385225286 12365432 623588..624259 1 NC_017375.1 hypothetical protein 624259 12365432 HMPREF0462_0644 Helicobacter pylori 83 hypothetical protein YP_005785211.1 623588 D 585538 CDS YP_005785212.1 385225287 12365433 624393..624707 1 NC_017375.1 Pfam: PF03692; InterPro: IPR005358; hypothetical protein 624707 12365433 HMPREF0462_0645 Helicobacter pylori 83 hypothetical protein YP_005785212.1 624393 D 585538 CDS YP_005785213.1 385225288 12365434 complement(624716..625609) 1 NC_017375.1 COG: COG0552; Pfam: PF00448; InterPro: IPR004390; cell division protein FtsY 625609 ftsY 12365434 ftsY Helicobacter pylori 83 cell division protein FtsY YP_005785213.1 624716 R 585538 CDS YP_005785214.1 385225289 12365435 complement(625616..626173) 1 NC_017375.1 hypothetical protein 626173 12365435 HMPREF0462_0647 Helicobacter pylori 83 hypothetical protein YP_005785214.1 625616 R 585538 CDS YP_005785215.1 385225290 12365436 626298..626945 1 NC_017375.1 COG: COG0212; Pfam: PF01812; InterPro: IPR002698; hypothetical protein 626945 12365436 HMPREF0462_0648 Helicobacter pylori 83 hypothetical protein YP_005785215.1 626298 D 585538 CDS YP_005785216.1 385225291 12365437 626845..628437 1 NC_017375.1 COG: COG1418; Pfam: PF00013,PF01966; InterPro: IPR003607; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 628437 ymdA 12365437 ymdA Helicobacter pylori 83 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_005785216.1 626845 D 585538 CDS YP_005785217.1 385225292 12365438 complement(628438..629691) 1 NC_017375.1 COG: COG0534; Pfam: PF01554; InterPro: IPR002528; multidrug efflux protein 629691 12365438 HMPREF0462_0650 Helicobacter pylori 83 multidrug efflux protein YP_005785217.1 628438 R 585538 CDS YP_005785218.1 385225293 12365439 complement(629754..631067) 1 NC_017375.1 COG: COG2056; Pfam: PF03553; InterPro: IPR004770; Na+/H+ antiporter family protein 631067 12365439 HMPREF0462_0651 Helicobacter pylori 83 Na+/H+ antiporter family protein YP_005785218.1 629754 R 585538 CDS YP_005785219.1 385225294 12365440 complement(631194..632072) 1 NC_017375.1 COG: COG0388; Pfam: PF00795; InterPro: IPR003010; para-aminobenzoate synthase 632072 pabB2 12365440 pabB2 Helicobacter pylori 83 para-aminobenzoate synthase YP_005785219.1 631194 R 585538 CDS YP_005785220.1 385225295 12365441 complement(632076..632237) 1 NC_017375.1 hypothetical protein 632237 12365441 HMPREF0462_0653 Helicobacter pylori 83 hypothetical protein YP_005785220.1 632076 R 585538 CDS YP_005785221.1 385225296 12365442 complement(632251..632910) 1 NC_017375.1 COG: COG1179; Pfam: PF00899; InterPro: IPR016040; ThiF family protein 632910 moeB 12365442 moeB Helicobacter pylori 83 ThiF family protein YP_005785221.1 632251 R 585538 CDS YP_005785222.1 385225297 12365443 complement(632963..633187) 1 NC_017375.1 hypothetical protein 633187 12365443 HMPREF0462_0655 Helicobacter pylori 83 hypothetical protein YP_005785222.1 632963 R 585538 CDS YP_005785223.1 385225298 12365444 complement(633189..633569) 1 NC_017375.1 COG: COG1516; Pfam: PF02561; InterPro: IPR003713; flagellar protein FliS 633569 fliS 12365444 fliS Helicobacter pylori 83 flagellar protein FliS YP_005785223.1 633189 R 585538 CDS YP_005785224.1 385225299 12365445 complement(633617..635674) 1 NC_017375.1 COG: COG1345; Pfam: PF02465,PF07196,PF07195; InterPro: IPR010809; flagellar hook-associated protein 2 635674 fliD 12365445 fliD Helicobacter pylori 83 flagellar hook-associated protein 2 YP_005785224.1 633617 R 585538 CDS YP_005785225.1 385225300 12365446 complement(635691..636062) 1 NC_017375.1 COG: COG1334; Pfam: PF03646; InterPro: IPR005186; polar flagellin 636062 flaG 12365446 flaG Helicobacter pylori 83 polar flagellin YP_005785225.1 635691 R 585538 CDS YP_005785226.1 385225301 12365447 complement(636146..637348) 1 NC_017375.1 COG: COG0739; Pfam: PF01551; InterPro: IPR016047; hypothetical protein 637348 12365447 HMPREF0462_0659 Helicobacter pylori 83 hypothetical protein YP_005785226.1 636146 R 585538 CDS YP_005785227.1 385225302 12365448 complement(637341..638159) 1 NC_017375.1 cell division protein FtsX 638159 ftsX 12365448 ftsX Helicobacter pylori 83 cell division protein FtsX YP_005785227.1 637341 R 585538 CDS YP_005785228.1 385225303 12365449 complement(638134..638805) 1 NC_017375.1 COG: COG1136; Pfam: PF00005; InterPro: IPR003593; lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein 638805 lolD 12365449 lolD Helicobacter pylori 83 lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein YP_005785228.1 638134 R 585538 CDS YP_005785229.1 385225304 12365450 complement(638802..639983) 1 NC_017375.1 COG: COG0220; Pfam: PF02390; InterPro: IPR003358; tRNA (guanine-N(7)-)-methyltransferase 639983 trmB 12365450 trmB Helicobacter pylori 83 tRNA (guanine-N(7)-)-methyltransferase YP_005785229.1 638802 R 585538 CDS YP_005785230.1 385225305 12365451 complement(639994..641241) 1 NC_017375.1 COG: COG3401; Pfam: PF00041; hypothetical protein 641241 12365451 HMPREF0462_0663 Helicobacter pylori 83 hypothetical protein YP_005785230.1 639994 R 585538 CDS YP_005785231.1 385225306 12365452 complement(641204..642187) 1 NC_017375.1 COG: COG0564; Pfam: PF01479,PF00849; InterPro: IPR006225; RluA family ribosomal large subunit pseudouridine synthase 642187 12365452 HMPREF0462_0664 Helicobacter pylori 83 RluA family ribosomal large subunit pseudouridine synthase YP_005785231.1 641204 R 585538 CDS YP_005785232.1 385225307 12365453 642349..642498 1 NC_017375.1 hypothetical protein 642498 12365453 HMPREF0462_0665 Helicobacter pylori 83 hypothetical protein YP_005785232.1 642349 D 585538 CDS YP_005785233.1 385225308 12365454 642491..643066 1 NC_017375.1 hypothetical protein 643066 12365454 HMPREF0462_0666 Helicobacter pylori 83 hypothetical protein YP_005785233.1 642491 D 585538 CDS YP_005785234.1 385225309 12365455 643047..643538 1 NC_017375.1 hypothetical protein 643538 12365455 HMPREF0462_0667 Helicobacter pylori 83 hypothetical protein YP_005785234.1 643047 D 585538 CDS YP_005785235.1 385225310 12365457 complement(644776..645732) 1 NC_017375.1 COG: COG0462; Pfam: PF00156; InterPro: IPR005946; ribose-phosphate pyrophosphokinase 645732 prsA 12365457 prsA Helicobacter pylori 83 ribose-phosphate pyrophosphokinase YP_005785235.1 644776 R 585538 CDS YP_005785236.1 385225311 12365458 complement(645797..646288) 1 NC_017375.1 COG: COG0537; Pfam: PF01230; InterPro: IPR011151; hit family protein 646288 12365458 HMPREF0462_0669 Helicobacter pylori 83 hit family protein YP_005785236.1 645797 R 585538 CDS YP_005785237.1 385225312 12365459 complement(646292..647773) 1 NC_017375.1 COG: COG0770; Pfam: PF08245; InterPro: IPR005863; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 647773 murF 12365459 murF Helicobacter pylori 83 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_005785237.1 646292 R 585538 CDS YP_005785238.1 385225313 12365460 complement(647760..648485) 1 NC_017375.1 COG: COG0596; 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 648485 12365460 HMPREF0462_0671 Helicobacter pylori 83 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase YP_005785238.1 647760 R 585538 CDS YP_005785239.1 385225314 12365461 complement(648485..649555) 1 NC_017375.1 COG: COG1181; Pfam: PF01820,PF07478; InterPro: IPR005905; D-alanine--D-alanine ligase 649555 ddlA 12365461 ddlA Helicobacter pylori 83 D-alanine--D-alanine ligase YP_005785239.1 648485 R 585538 CDS YP_005785240.1 385225315 12365462 complement(649605..650081) 1 NC_017375.1 COG: COG1267; Pfam: PF04608; InterPro: IPR007686; phosphatidylglycerophosphatase A 650081 pgpA 12365462 pgpA Helicobacter pylori 83 phosphatidylglycerophosphatase A YP_005785240.1 649605 R 585538 CDS YP_005785241.1 385225316 12365463 650229..651338 1 NC_017375.1 COG: COG0075; Pfam: PF00266; InterPro: IPR015421; phosphoserine transaminase 651338 serC 12365463 serC Helicobacter pylori 83 phosphoserine transaminase YP_005785241.1 650229 D 585538 CDS YP_005785242.1 385225317 12365464 651347..651808 1 NC_017375.1 COG: COG2236; Pfam: PF00156; xanthine guanine phosphoribosyl transferase (gpt) 651808 12365464 HMPREF0462_0675 Helicobacter pylori 83 xanthine guanine phosphoribosyl transferase (gpt) YP_005785242.1 651347 D 585538 CDS YP_005785243.1 385225318 12365465 651810..653165 1 NC_017375.1 COG: COG0621; Pfam: PF00919,PF04055; InterPro: IPR005840; 2-methylthioadenine synthetase 653165 12365465 HMPREF0462_0676 Helicobacter pylori 83 2-methylthioadenine synthetase YP_005785243.1 651810 D 585538 CDS YP_005785244.1 385225319 12365466 653481..654197 1 NC_017375.1 hypothetical protein 654197 12365466 HMPREF0462_0677 Helicobacter pylori 83 hypothetical protein YP_005785244.1 653481 D 585538 CDS YP_005785245.1 385225320 12365467 654221..654490 1 NC_017375.1 hypothetical protein 654490 12365467 HMPREF0462_0678 Helicobacter pylori 83 hypothetical protein YP_005785245.1 654221 D 585538 CDS YP_005785246.1 385225321 12365468 654659..654955 1 NC_017375.1 labile enterotoxin output A 654955 12365468 HMPREF0462_0679 Helicobacter pylori 83 labile enterotoxin output A YP_005785246.1 654659 D 585538 CDS YP_005785247.1 385225322 12365469 654888..655346 1 NC_017375.1 labile enterotoxin output A 655346 12365469 HMPREF0462_0680 Helicobacter pylori 83 labile enterotoxin output A YP_005785247.1 654888 D 585538 CDS YP_005785248.1 385225323 12365470 655347..656201 1 NC_017375.1 labile enterotoxin output A 656201 12365470 HMPREF0462_0681 Helicobacter pylori 83 labile enterotoxin output A YP_005785248.1 655347 D 585538 CDS YP_005785249.1 385225324 12365471 656309..656629 1 NC_017375.1 hypothetical protein 656629 12365471 HMPREF0462_0682 Helicobacter pylori 83 hypothetical protein YP_005785249.1 656309 D 585538 CDS YP_005785250.1 385225325 12365472 656626..657693 1 NC_017375.1 ATP /GTP binding protein 657693 12365472 HMPREF0462_0683 Helicobacter pylori 83 ATP /GTP binding protein YP_005785250.1 656626 D 585538 CDS YP_005785251.1 385225326 12365473 657716..658747 1 NC_017375.1 COG: COG0037; Pfam: PF01171; InterPro: IPR012795; tRNA(Ile)-lysidine synthase 658747 12365473 HMPREF0462_0684 Helicobacter pylori 83 tRNA(Ile)-lysidine synthase YP_005785251.1 657716 D 585538 CDS YP_005785252.1 385225327 12365474 658840..659826 1 NC_017375.1 COG: COG0042; Pfam: PF01207; InterPro: IPR001269; tRNA-dihydrouridine synthase B 659826 dusB 12365474 dusB Helicobacter pylori 83 tRNA-dihydrouridine synthase B YP_005785252.1 658840 D 585538 CDS YP_005785253.1 385225328 12365475 659796..660713 1 NC_017375.1 Pfam: PF01856; outer membrane protein 660713 12365475 HMPREF0462_0686 Helicobacter pylori 83 outer membrane protein YP_005785253.1 659796 D 585538 CDS YP_005785254.1 385225329 12365476 660932..662881 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein SabA 662881 12365476 HMPREF0462_0687 Helicobacter pylori 83 outer membrane protein SabA YP_005785254.1 660932 D 585538 CDS YP_005785255.1 385225330 12365477 complement(662955..664286) 1 NC_017375.1 COG: COG2704; Pfam: PF03605; InterPro: IPR004668; anaerobic C4-dicarboxylate membrane transporter DcuA 664286 dcuA 12365477 dcuA Helicobacter pylori 83 anaerobic C4-dicarboxylate membrane transporter DcuA YP_005785255.1 662955 R 585538 CDS YP_005785256.1 385225331 12365478 664362..665408 1 NC_017375.1 COG: COG0252; Pfam: PF00710; InterPro: IPR004550; L-asparaginase 665408 ansB 12365478 ansB Helicobacter pylori 83 L-asparaginase YP_005785256.1 664362 D 585538 CDS YP_005785257.1 385225332 12365479 complement(665683..666144) 1 NC_017375.1 Pfam: PF06518; InterPro: IPR009488; hypothetical protein 666144 12365479 HMPREF0462_0690 Helicobacter pylori 83 hypothetical protein YP_005785257.1 665683 R 585538 CDS YP_005785258.1 385225333 12365480 complement(666173..666595) 1 NC_017375.1 Pfam: PF06518; InterPro: IPR009488; hypothetical protein 666595 12365480 HMPREF0462_0691 Helicobacter pylori 83 hypothetical protein YP_005785258.1 666173 R 585538 CDS YP_005785259.1 385225334 12365481 666882..667514 1 NC_017375.1 COG: COG1279; Pfam: PF01810; InterPro: IPR001123; LysE family L-lysine exporter 667514 12365481 HMPREF0462_0692 Helicobacter pylori 83 LysE family L-lysine exporter YP_005785259.1 666882 D 585538 CDS YP_005785260.1 385225335 12365482 667583..669283 1 NC_017375.1 COG: COG2812; Pfam: PF00004; InterPro: IPR012763; DNA polymerase III subunit gamma/tau DnaX 669283 dnaX 12365482 dnaX Helicobacter pylori 83 DNA polymerase III subunit gamma/tau DnaX YP_005785260.1 667583 D 585538 CDS YP_005785261.1 385225336 12365483 669280..669681 1 NC_017375.1 COG: COG0802; Pfam: PF02367; InterPro: IPR003442; hypothetical protein 669681 12365483 HMPREF0462_0694 Helicobacter pylori 83 hypothetical protein YP_005785261.1 669280 D 585538 CDS YP_005785262.1 385225337 12365484 669694..670416 1 NC_017375.1 COG: COG1137; Pfam: PF00005; InterPro: IPR003593; ABC transporter ATP-binding protein 670416 12365484 HMPREF0462_0695 Helicobacter pylori 83 ABC transporter ATP-binding protein YP_005785262.1 669694 D 585538 CDS YP_005785263.1 385225338 12365485 670419..671663 1 NC_017375.1 COG: COG1508; Pfam: PF00309,PF04963,PF04552; InterPro: IPR000394; RNA polymerase factor sigma-54 671663 12365485 HMPREF0462_0696 Helicobacter pylori 83 RNA polymerase factor sigma-54 YP_005785263.1 670419 D 585538 CDS YP_005785264.1 385225339 12365486 complement(671741..671884) 1 NC_017375.1 hypothetical protein 671884 12365486 HMPREF0462_0697 Helicobacter pylori 83 hypothetical protein YP_005785264.1 671741 R 585538 CDS YP_005785265.1 385225340 12365487 672059..672973 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 672973 12365487 HMPREF0462_0698 Helicobacter pylori 83 outer membrane protein YP_005785265.1 672059 D 585538 CDS YP_005785266.1 385225341 12365488 complement(673038..673718) 1 NC_017375.1 COG: COG0603; Pfam: PF06508; InterPro: IPR004479; transcription regulator ExsB 673718 exsB 12365488 exsB Helicobacter pylori 83 transcription regulator ExsB YP_005785266.1 673038 R 585538 CDS YP_005785267.1 385225342 12365489 673780..675003 1 NC_017375.1 COG: COG0617; Pfam: PF01743; InterPro: IPR002646; poly(A) polymerase 675003 papS 12365489 papS Helicobacter pylori 83 poly(A) polymerase YP_005785267.1 673780 D 585538 CDS YP_005785268.1 385225343 12365490 675000..675773 1 NC_017375.1 COG: COG0778; Pfam: PF00881; InterPro: IPR000415; NAD(P)H-flavin oxidoreductase 675773 frp 12365490 frp Helicobacter pylori 83 NAD(P)H-flavin oxidoreductase YP_005785268.1 675000 D 585538 CDS YP_005785269.1 385225344 12365491 675939..677258 1 NC_017375.1 COG: COG0008; Pfam: PF00749; InterPro: IPR004527; glutamate--tRNA ligase 677258 gltX2 12365491 gltX2 Helicobacter pylori 83 glutamate--tRNA ligase YP_005785269.1 675939 D 585538 CDS YP_005785270.1 385225345 12365492 677255..677548 1 NC_017375.1 COG: COG0762; Pfam: PF02325; InterPro: IPR003425; yggt family protein 677548 12365492 HMPREF0462_0703 Helicobacter pylori 83 yggt family protein YP_005785270.1 677255 D 585538 CDS YP_005785271.1 385225346 12365493 677518..679239 1 NC_017375.1 COG: COG0741; Pfam: PF01464; InterPro: IPR008258; soluble lytic murein transglycosylase 679239 slt 12365493 slt Helicobacter pylori 83 soluble lytic murein transglycosylase YP_005785271.1 677518 D 585538 CDS YP_005785272.1 385225347 12365494 679236..680057 1 NC_017375.1 COG: COG1210; Pfam: PF00483; InterPro: IPR005835; UTP-glucose-1-phosphate uridylyltransferase 680057 galU 12365494 galU Helicobacter pylori 83 UTP-glucose-1-phosphate uridylyltransferase YP_005785272.1 679236 D 585538 CDS YP_005785273.1 385225348 12365495 680069..680476 1 NC_017375.1 hypothetical protein 680476 12365495 HMPREF0462_0706 Helicobacter pylori 83 hypothetical protein YP_005785273.1 680069 D 585538 CDS YP_005785274.1 385225349 12365496 680479..681747 1 NC_017375.1 COG: COG0766; Pfam: PF00275; InterPro: IPR005750; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 681747 murA 12365496 murA Helicobacter pylori 83 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005785274.1 680479 D 585538 CDS YP_005785275.1 385225350 12365497 681805..683211 1 NC_017375.1 COG: COG1027; Pfam: PF00206; InterPro: IPR004708; aspartate ammonia-lyase 683211 aspA 12365497 aspA Helicobacter pylori 83 aspartate ammonia-lyase YP_005785275.1 681805 D 585538 CDS YP_005785276.1 385225351 12365498 683217..683846 1 NC_017375.1 Pfam: PF03167; family 4 uracil-DNA glycosylase 683846 12365498 HMPREF0462_0709 Helicobacter pylori 83 family 4 uracil-DNA glycosylase YP_005785276.1 683217 D 585538 CDS YP_005785277.1 385225352 12365499 complement(683855..684901) 1 NC_017375.1 InterPro: IPR001503; fucosyltransferase 684901 12365499 HMPREF0462_0710 Helicobacter pylori 83 fucosyltransferase YP_005785277.1 683855 R 585538 CDS YP_005785278.1 385225353 12365500 complement(685157..685780) 1 NC_017375.1 COG: COG0560; Pfam: PF00702; InterPro: IPR004469; phosphoserine phosphatase SerB 685780 serB 12365500 serB Helicobacter pylori 83 phosphoserine phosphatase SerB YP_005785278.1 685157 R 585538 CDS YP_005785279.1 385225354 12365501 complement(685796..686299) 1 NC_017375.1 COG: COG1528; Pfam: PF00210; InterPro: IPR012347; nonheme iron-containing ferritin 686299 ftnB 12365501 ftnB Helicobacter pylori 83 nonheme iron-containing ferritin YP_005785279.1 685796 R 585538 CDS YP_005785280.1 385225355 12365502 686609..687691 1 NC_017375.1 COG: COG1060; Pfam: PF04055; InterPro: IPR005244; SCO4494 family menaquinone biosynthesis protein 687691 12365502 HMPREF0462_0713 Helicobacter pylori 83 SCO4494 family menaquinone biosynthesis protein YP_005785280.1 686609 D 585538 CDS YP_005785281.1 385225356 12365503 687864..690494 1 NC_017375.1 COG: COG4775; Pfam: PF07244,PF01103; InterPro: IPR000184; outer membrane protein assembly complex 690494 yaeT 12365503 yaeT Helicobacter pylori 83 outer membrane protein assembly complex YP_005785281.1 687864 D 585538 CDS YP_005785282.1 385225357 12365504 690496..691557 1 NC_017375.1 COG: COG1060; Pfam: PF04055; InterPro: IPR005244; SCO4550 family menaquinone biosynthesis protein 691557 12365504 HMPREF0462_0715 Helicobacter pylori 83 SCO4550 family menaquinone biosynthesis protein YP_005785282.1 690496 D 585538 CDS YP_005785283.1 385225358 12365505 691554..692858 1 NC_017375.1 COG: COG0612; Pfam: PF00675,PF05193; InterPro: IPR011237; processing protease 692858 ymxG 12365505 ymxG Helicobacter pylori 83 processing protease YP_005785283.1 691554 D 585538 CDS YP_005785284.1 385225359 12365506 692855..694282 1 NC_017375.1 COG: COG0064; Pfam: PF02934,PF01162,PF02637; InterPro: IPR004413; glutamyl-tRNA(Gln) amidotransferase subunit B 694282 gatB 12365506 gatB Helicobacter pylori 83 glutamyl-tRNA(Gln) amidotransferase subunit B YP_005785284.1 692855 D 585538 CDS YP_005785285.1 385225360 12365507 694282..695517 1 NC_017375.1 Pfam: PF09312; SurA domain-containing protein 695517 12365507 HMPREF0462_0718 Helicobacter pylori 83 SurA domain-containing protein YP_005785285.1 694282 D 585538 CDS YP_005785286.1 385225361 12365508 695528..696535 1 NC_017375.1 hypothetical protein 696535 12365508 HMPREF0462_0719 Helicobacter pylori 83 hypothetical protein YP_005785286.1 695528 D 585538 CDS YP_005785287.1 385225362 12365509 696536..697000 1 NC_017375.1 COG: COG0328; Pfam: PF00075; InterPro: IPR002156; ribonuclease HI 697000 rnhA 12365509 rnhA Helicobacter pylori 83 ribonuclease HI YP_005785287.1 696536 D 585538 CDS YP_005785288.1 385225363 12365510 696975..697694 1 NC_017375.1 COG: COG0571; Pfam: PF00636,PF00035; InterPro: IPR011907; ribonuclease III 697694 rnc 12365510 rnc Helicobacter pylori 83 ribonuclease III YP_005785288.1 696975 D 585538 CDS YP_005785289.1 385225364 12365511 697691..698788 1 NC_017375.1 COG: COG0082; Pfam: PF01264; InterPro: IPR000453; chorismate synthase 698788 aroC 12365511 aroC Helicobacter pylori 83 chorismate synthase YP_005785289.1 697691 D 585538 CDS YP_005785290.1 385225365 12365512 698826..699341 1 NC_017375.1 hypothetical protein 699341 12365512 HMPREF0462_0723 Helicobacter pylori 83 hypothetical protein YP_005785290.1 698826 D 585538 CDS YP_005785291.1 385225366 12365513 699341..700714 1 NC_017375.1 COG: COG0635; Pfam: PF04055,PF06969; InterPro: IPR004558; oxygen-independent coproporphyrinogen III oxidase 700714 hemN 12365513 hemN Helicobacter pylori 83 oxygen-independent coproporphyrinogen III oxidase YP_005785291.1 699341 D 585538 CDS YP_005785292.1 385225367 12365514 700711..702000 1 NC_017375.1 COG: COG0247; Pfam: PF00037,PF02754; InterPro: IPR004017; iron-sulfur cluster-binding domain protein 702000 12365514 HMPREF0462_0725 Helicobacter pylori 83 iron-sulfur cluster-binding domain protein YP_005785292.1 700711 D 585538 CDS YP_005785293.1 385225368 12365515 702079..702786 1 NC_017375.1 COG: COG4889; Pfam: PF04471,PF04851; InterPro: IPR007560; restriction endonuclease superfamily protein 702786 12365515 HMPREF0462_0726 Helicobacter pylori 83 restriction endonuclease superfamily protein YP_005785293.1 702079 D 585538 CDS YP_005785294.1 385225369 12365516 702767..706909 1 NC_017375.1 COG: COG4889; Pfam: PF04851,PF00271; InterPro: IPR006935; helicase domain-containing protein 706909 12365516 HMPREF0462_0727 Helicobacter pylori 83 helicase domain-containing protein YP_005785294.1 702767 D 585538 CDS YP_005785295.1 385225370 12365517 706906..707754 1 NC_017375.1 hypothetical protein 707754 12365517 HMPREF0462_0728 Helicobacter pylori 83 hypothetical protein YP_005785295.1 706906 D 585538 CDS YP_005785296.1 385225371 12365518 707853..708257 1 NC_017375.1 hypothetical protein 708257 12365518 HMPREF0462_0729 Helicobacter pylori 83 hypothetical protein YP_005785296.1 707853 D 585538 CDS YP_005785297.1 385225372 12365519 708379..709191 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 709191 12365519 HMPREF0462_0730 Helicobacter pylori 83 outer membrane protein YP_005785297.1 708379 D 585538 CDS YP_005785298.1 385225373 12365520 709350..710522 1 NC_017375.1 COG: COG0436; Pfam: PF00155; InterPro: IPR004839; aspartate transaminase 710522 aspC 12365520 aspC Helicobacter pylori 83 aspartate transaminase YP_005785298.1 709350 D 585538 CDS YP_005785299.1 385225374 12365521 710727..712133 1 NC_017375.1 hypothetical protein 712133 12365521 HMPREF0462_0732 Helicobacter pylori 83 hypothetical protein YP_005785299.1 710727 D 585538 CDS YP_005785300.1 385225375 12365522 712140..713210 1 NC_017375.1 COG: COG0582; Pfam: PF00589; InterPro: IPR002104; tyrosine recombinase XerC 713210 xerC 12365522 xerC Helicobacter pylori 83 tyrosine recombinase XerC YP_005785300.1 712140 D 585538 CDS YP_005785301.1 385225376 12365523 complement(713273..713650) 1 NC_017375.1 COG: COG0350; Pfam: PF02870,PF01035; InterPro: IPR014048; methylated-DNA--protein-cysteine methyltransferase 713650 ogt 12365523 ogt Helicobacter pylori 83 methylated-DNA--protein-cysteine methyltransferase YP_005785301.1 713273 R 585538 CDS YP_005785302.1 385225377 12365524 complement(713647..713778) 1 NC_017375.1 Pfam: PF02870; methylated-DNA--protein-cysteine methyltransferase 713778 dat 12365524 dat Helicobacter pylori 83 methylated-DNA--protein-cysteine methyltransferase YP_005785302.1 713647 R 585538 CDS YP_005785303.1 385225378 12365525 complement(713782..714549) 1 NC_017375.1 COG: COG0730; Pfam: PF01925; InterPro: IPR002781; hypothetical protein 714549 12365525 HMPREF0462_0736 Helicobacter pylori 83 hypothetical protein YP_005785303.1 713782 R 585538 CDS YP_005785304.1 385225379 12365526 complement(714607..715554) 1 NC_017375.1 COG: COG0673; Pfam: PF01408,PF02894; InterPro: IPR016040; gfo/Idh/MocA family oxidoreductase 715554 wbpB 12365526 wbpB Helicobacter pylori 83 gfo/Idh/MocA family oxidoreductase YP_005785304.1 714607 R 585538 CDS YP_005785305.1 385225380 12365527 complement(715616..717982) 1 NC_017375.1 COG: COG0209; Pfam: PF03477,PF00317,PF02867; InterPro: IPR013346; ribonucleotide-diphosphate reductase subunit alpha 717982 nrdA 12365527 nrdA Helicobacter pylori 83 ribonucleotide-diphosphate reductase subunit alpha YP_005785305.1 715616 R 585538 CDS YP_005785306.1 385225381 12365528 complement(718153..718623) 1 NC_017375.1 hypothetical protein 718623 12365528 HMPREF0462_0739 Helicobacter pylori 83 hypothetical protein YP_005785306.1 718153 R 585538 CDS YP_005785307.1 385225382 12365529 complement(718647..718997) 1 NC_017375.1 hypothetical protein 718997 12365529 HMPREF0462_0740 Helicobacter pylori 83 hypothetical protein YP_005785307.1 718647 R 585538 CDS YP_005785308.1 385225383 12365530 complement(719293..719832) 1 NC_017375.1 hypothetical protein 719832 12365530 HMPREF0462_0741 Helicobacter pylori 83 hypothetical protein YP_005785308.1 719293 R 585538 CDS YP_005785309.1 385225384 12365531 complement(719839..720174) 1 NC_017375.1 hypothetical protein 720174 12365531 HMPREF0462_0742 Helicobacter pylori 83 hypothetical protein YP_005785309.1 719839 R 585538 CDS YP_005785310.1 385225385 12365532 complement(720419..721756) 1 NC_017375.1 COG: COG1207; Pfam: PF01128,PF00132; InterPro: IPR005882; UDP-N-acetylglucosamine diphosphorylase 721756 glmU 12365532 glmU Helicobacter pylori 83 UDP-N-acetylglucosamine diphosphorylase YP_005785310.1 720419 R 585538 CDS YP_005785311.1 385225386 12365533 721808..722554 1 NC_017375.1 COG: COG1338; Pfam: PF00813; InterPro: IPR005837; flagellar biosynthetic protein FliP 722554 fliP 12365533 fliP Helicobacter pylori 83 flagellar biosynthetic protein FliP YP_005785311.1 721808 D 585538 CDS YP_005785312.1 385225387 12365534 complement(722594..724897) 1 NC_017375.1 COG: COG4772; Pfam: PF07715,PF00593; InterPro: IPR000531; iron(III) dicitrate transporter 724897 fecA2 12365534 fecA2 Helicobacter pylori 83 iron(III) dicitrate transporter YP_005785312.1 722594 R 585538 CDS YP_005785313.1 385225388 12365535 complement(725144..727078) 1 NC_017375.1 COG: COG0370; Pfam: PF01926,PF02421,PF07670,PF07664; InterPro: IPR003373; FeoB family ferrous iron (Fe2+) uptake protein 727078 feoB 12365535 feoB Helicobacter pylori 83 FeoB family ferrous iron (Fe2+) uptake protein YP_005785313.1 725144 R 585538 CDS YP_005785314.1 385225389 12365536 727191..728021 1 NC_017375.1 COG: COG3298; polysaccharide biosynthesis protein 728021 wlaX 12365536 wlaX Helicobacter pylori 83 polysaccharide biosynthesis protein YP_005785314.1 727191 D 585538 CDS YP_005785315.1 385225390 12365537 complement(728106..729410) 1 NC_017375.1 COG: COG0270; Pfam: PF00145; InterPro: IPR001525; DNA (cytosine-5-)-methyltransferase 729410 dcm 12365537 dcm Helicobacter pylori 83 DNA (cytosine-5-)-methyltransferase YP_005785315.1 728106 R 585538 CDS YP_005785316.1 385225391 12365538 729473..730114 1 NC_017375.1 type II site-specific deoxyribonuclease 730114 nlaIVR 12365538 nlaIVR Helicobacter pylori 83 type II site-specific deoxyribonuclease YP_005785316.1 729473 D 585538 CDS YP_005785317.1 385225392 12365539 730224..730625 1 NC_017375.1 COG: COG3298; polysaccharide biosynthesis protein 730625 wlaX2 12365539 wlaX2 Helicobacter pylori 83 polysaccharide biosynthesis protein YP_005785317.1 730224 D 585538 CDS YP_005785318.1 385225393 12365540 730802..731977 1 NC_017375.1 COG: COG0183; Pfam: PF00108,PF02803; InterPro: IPR002155; acetyl-CoA acetyltransferase 731977 atoB 12365540 atoB Helicobacter pylori 83 acetyl-CoA acetyltransferase YP_005785318.1 730802 D 585538 CDS YP_005785319.1 385225394 12365541 731988..732686 1 NC_017375.1 COG: COG1788; Pfam: PF01144; InterPro: IPR012792; 3-oxoadipate CoA-transferase subunit A 732686 pcaI 12365541 pcaI Helicobacter pylori 83 3-oxoadipate CoA-transferase subunit A YP_005785319.1 731988 D 585538 CDS YP_005785320.1 385225395 12365542 732683..733306 1 NC_017375.1 COG: COG2057; Pfam: PF01144; InterPro: IPR004165; 3-oxoadipate CoA-succinyl transferase 733306 dxnH 12365542 dxnH Helicobacter pylori 83 3-oxoadipate CoA-succinyl transferase YP_005785320.1 732683 D 585538 CDS YP_005785321.1 385225396 12365543 733325..734143 1 NC_017375.1 COG: COG2031; Pfam: PF02667; InterPro: IPR006160; short-chain fatty acids transporter 734143 atoE 12365543 atoE Helicobacter pylori 83 short-chain fatty acids transporter YP_005785321.1 733325 D 585538 CDS YP_005785322.1 385225397 12365544 734124..734690 1 NC_017375.1 COG: COG2031; Pfam: PF02667; InterPro: IPR006160; short-chain fatty acid transporter 734690 atoE2 12365544 atoE2 Helicobacter pylori 83 short-chain fatty acid transporter YP_005785322.1 734124 D 585538 CDS YP_005785323.1 385225398 12365545 734811..735812 1 NC_017375.1 COG: COG3528; outer membrane protein 735812 12365545 HMPREF0462_0756 Helicobacter pylori 83 outer membrane protein YP_005785323.1 734811 D 585538 CDS YP_005785324.1 385225399 12365546 736022..736204 1 NC_017375.1 Pfam: PF05378; hydantoin utilization protein A 736204 hyuA 12365546 hyuA Helicobacter pylori 83 hydantoin utilization protein A YP_005785324.1 736022 D 585538 CDS YP_005785325.1 385225400 12365547 736252..738165 1 NC_017375.1 COG: COG0145; Pfam: PF05378,PF01968; InterPro: IPR002821; hydantoin utilization protein A 738165 hyuA2 12365547 hyuA2 Helicobacter pylori 83 hydantoin utilization protein A YP_005785325.1 736252 D 585538 CDS YP_005785326.1 385225401 12365548 738178..740475 1 NC_017375.1 COG: COG0146; Pfam: PF02538; InterPro: IPR003692; N-methylhydantoinase 740475 12365548 HMPREF0462_0759 Helicobacter pylori 83 N-methylhydantoinase YP_005785326.1 738178 D 585538 CDS YP_005785327.1 385225402 12365549 740465..740992 1 NC_017375.1 COG: COG4647; Pfam: PF08882; InterPro: IPR014979; acetone carboxylase subunit gamma 740992 acxC 12365549 acxC Helicobacter pylori 83 acetone carboxylase subunit gamma YP_005785327.1 740465 D 585538 CDS YP_005785328.1 385225403 12365550 741300..742328 1 NC_017375.1 hypothetical protein 742328 12365550 HMPREF0462_0761 Helicobacter pylori 83 hypothetical protein YP_005785328.1 741300 D 585538 CDS YP_005785329.1 385225404 12365551 742321..742707 1 NC_017375.1 COG: COG0818; Pfam: PF01219; InterPro: IPR000829; diacylglycerol kinase 742707 dgkA 12365551 dgkA Helicobacter pylori 83 diacylglycerol kinase YP_005785329.1 742321 D 585538 CDS YP_005785330.1 385225405 12365552 742727..745213 1 NC_017375.1 COG: COG0188; Pfam: PF00521,PF03989; InterPro: IPR005743; DNA topoisomerase subunit A 745213 gyrA 12365552 gyrA Helicobacter pylori 83 DNA topoisomerase subunit A YP_005785330.1 742727 D 585538 CDS YP_005785331.1 385225406 12365553 745210..745686 1 NC_017375.1 hypothetical protein 745686 12365553 HMPREF0462_0764 Helicobacter pylori 83 hypothetical protein YP_005785331.1 745210 D 585538 CDS YP_005785332.1 385225407 12365554 745683..746828 1 NC_017375.1 COG: COG2204; Pfam: PF00072,PF00158; InterPro: IPR002078; nitrogen regulation protein NR(I) 746828 ntrC 12365554 ntrC Helicobacter pylori 83 nitrogen regulation protein NR(I) YP_005785332.1 745683 D 585538 CDS YP_005785333.1 385225408 12365555 complement(747145..749970) 1 NC_017375.1 COG: COG0178; Pfam: PF00005; InterPro: IPR004602; excision endonuclease subunit UvrA 749970 uvrA 12365555 uvrA Helicobacter pylori 83 excision endonuclease subunit UvrA YP_005785333.1 747145 R 585538 CDS YP_005785334.1 385225409 12365556 750145..750966 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; HOP family outer membrane porin 750966 hopE 12365556 hopE Helicobacter pylori 83 HOP family outer membrane porin YP_005785334.1 750145 D 585538 CDS YP_005785335.1 385225410 12365557 751160..752086 1 NC_017375.1 COG: COG0275; Pfam: PF01795; InterPro: IPR002903; S-adenosyl-methyltransferase MraW 752086 mraW 12365557 mraW Helicobacter pylori 83 S-adenosyl-methyltransferase MraW YP_005785335.1 751160 D 585538 CDS YP_005785336.1 385225411 12365558 752106..752450 1 NC_017375.1 hypothetical protein 752450 12365558 HMPREF0462_0769 Helicobacter pylori 83 hypothetical protein YP_005785336.1 752106 D 585538 CDS YP_005785337.1 385225412 12365559 752695..753597 1 NC_017375.1 COG: COG1912; Pfam: PF01887; InterPro: IPR002747; hypothetical protein 753597 12365559 HMPREF0462_0770 Helicobacter pylori 83 hypothetical protein YP_005785337.1 752695 D 585538 CDS YP_005785338.1 385225413 12365560 753713..753892 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; hypothetical protein 753892 12365560 HMPREF0462_0771 Helicobacter pylori 83 hypothetical protein YP_005785338.1 753713 D 585538 CDS YP_005785339.1 385225414 12365561 754080..755300 1 NC_017375.1 COG: COG1896; hypothetical protein 755300 12365561 HMPREF0462_0772 Helicobacter pylori 83 hypothetical protein YP_005785339.1 754080 D 585538 CDS YP_005785340.1 385225415 12365562 complement(755418..756332) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 756332 12365562 HMPREF0462_0773 Helicobacter pylori 83 outer membrane protein YP_005785340.1 755418 R 585538 CDS YP_005785341.1 385225416 12365563 756507..756959 1 NC_017375.1 hypothetical protein 756959 12365563 HMPREF0462_0774 Helicobacter pylori 83 hypothetical protein YP_005785341.1 756507 D 585538 CDS YP_005785342.1 385225417 12365564 757079..757492 1 NC_017375.1 hypothetical protein 757492 12365564 HMPREF0462_0775 Helicobacter pylori 83 hypothetical protein YP_005785342.1 757079 D 585538 CDS YP_005785343.1 385225418 12365565 complement(757497..759035) 1 NC_017375.1 hypothetical protein 759035 12365565 HMPREF0462_0776 Helicobacter pylori 83 hypothetical protein YP_005785343.1 757497 R 585538 CDS YP_005785344.1 385225419 12365566 complement(759037..759573) 1 NC_017375.1 COG: COG0680; Pfam: PF01750; InterPro: IPR000671; hydrogenase expression/formation protein 759573 hybD 12365566 hybD Helicobacter pylori 83 hydrogenase expression/formation protein YP_005785344.1 759037 R 585538 CDS YP_005785345.1 385225420 12365567 complement(759570..760244) 1 NC_017375.1 COG: COG1969; Pfam: PF01292; InterPro: IPR000516; quinone-reactive Ni/Fe hydrogenase HydC 760244 12365567 HMPREF0462_0778 Helicobacter pylori 83 quinone-reactive Ni/Fe hydrogenase HydC YP_005785345.1 759570 R 585538 CDS YP_005785346.1 385225421 12365568 complement(760257..761993) 1 NC_017375.1 COG: COG0374; Pfam: PF00374; InterPro: IPR001501; quinone-reactive Ni/Fe-hydrogenase 761993 hydB 12365568 hydB Helicobacter pylori 83 quinone-reactive Ni/Fe-hydrogenase YP_005785346.1 760257 R 585538 CDS YP_005785347.1 385225422 12365569 complement(762010..763164) 1 NC_017375.1 COG: COG1740; Pfam: PF08425,PF01058; InterPro: IPR001821; quinone-reactive Ni/Fe-hydrogenase 763164 hydA 12365569 hydA Helicobacter pylori 83 quinone-reactive Ni/Fe-hydrogenase YP_005785347.1 762010 R 585538 CDS YP_005785348.1 385225423 12365570 763298..763882 1 NC_017375.1 COG: COG2249; Pfam: PF02525; InterPro: IPR003680; NAD(P)H quinone dehydrogenase MdaB 763882 mdaB 12365570 mdaB Helicobacter pylori 83 NAD(P)H quinone dehydrogenase MdaB YP_005785348.1 763298 D 585538 CDS YP_005785349.1 385225424 12365571 complement(763848..763967) 1 NC_017375.1 hypothetical protein 763967 12365571 HMPREF0462_0782 Helicobacter pylori 83 hypothetical protein YP_005785349.1 763848 R 585538 CDS YP_005785350.1 385225425 12365572 complement(763933..765984) 1 NC_017375.1 COG: COG1479; Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein 765984 12365572 HMPREF0462_0783 Helicobacter pylori 83 hypothetical protein YP_005785350.1 763933 R 585538 CDS YP_005785351.1 385225426 12365573 complement(766099..767157) 1 NC_017375.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; hypothetical protein 767157 12365573 HMPREF0462_0784 Helicobacter pylori 83 hypothetical protein YP_005785351.1 766099 R 585538 CDS YP_005785352.1 385225427 12365574 complement(767169..768383) 1 NC_017375.1 COG: COG2171; Pfam: PF00132; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 768383 dapD 12365574 dapD Helicobacter pylori 83 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase YP_005785352.1 767169 R 585538 CDS YP_005785353.1 385225428 12365575 complement(768386..769465) 1 NC_017375.1 COG: COG0821; Pfam: PF04551; InterPro: IPR004588; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 769465 ispG 12365575 ispG Helicobacter pylori 83 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_005785353.1 768386 R 585538 CDS YP_005785354.1 385225429 12365576 769620..770747 1 NC_017375.1 COG: COG0436; Pfam: PF00155; InterPro: IPR015421; succinyldiaminopimelate transaminase 770747 dapC 12365576 dapC Helicobacter pylori 83 succinyldiaminopimelate transaminase YP_005785354.1 769620 D 585538 CDS YP_005785355.1 385225430 12365577 770740..772089 1 NC_017375.1 COG: COG0773; Pfam: PF01225,PF08245,PF02875; InterPro: IPR005758; UDP-N-acetylmuramate--L-alanine ligase 772089 murC 12365577 murC Helicobacter pylori 83 UDP-N-acetylmuramate--L-alanine ligase YP_005785355.1 770740 D 585538 CDS YP_005785356.1 385225431 12365578 772089..772454 1 NC_017375.1 hypothetical protein 772454 12365578 HMPREF0462_0789 Helicobacter pylori 83 hypothetical protein YP_005785356.1 772089 D 585538 CDS YP_005785357.1 385225432 12365579 772485..774734 1 NC_017375.1 COG: COG1193; Pfam: PF00488,PF01713; InterPro: IPR005747; DNA mismatch repair protein 774734 mutS 12365579 mutS Helicobacter pylori 83 DNA mismatch repair protein YP_005785357.1 772485 D 585538 CDS YP_005785358.1 385225433 12365580 complement(774886..775407) 1 NC_017375.1 COG: COG0221; Pfam: PF00719; InterPro: IPR008162; inorganic diphosphatase 775407 ppa 12365580 ppa Helicobacter pylori 83 inorganic diphosphatase YP_005785358.1 774886 R 585538 CDS YP_005785359.1 385225434 12365581 complement(775463..776260) 1 NC_017375.1 Pfam: PF01755; jhp0563 family glycosyltransferase 776260 12365581 HMPREF0462_0792 Helicobacter pylori 83 jhp0563 family glycosyltransferase YP_005785359.1 775463 R 585538 CDS YP_005785360.1 385225435 12365582 complement(776202..776768) 1 NC_017375.1 Pfam: PF01755; InterPro: IPR002654; lipopolysaccharide biosynthesis protein 776768 12365582 HMPREF0462_0793 Helicobacter pylori 83 lipopolysaccharide biosynthesis protein YP_005785360.1 776202 R 585538 CDS YP_005785361.1 385225436 12365583 complement(776821..777819) 1 NC_017375.1 COG: COG3306; Pfam: PF01755; InterPro: IPR002654; jhp0562 family glycosyltransferase 777819 12365583 HMPREF0462_0794 Helicobacter pylori 83 jhp0562 family glycosyltransferase YP_005785361.1 776821 R 585538 CDS YP_005785362.1 385225437 12365584 complement(777844..778419) 1 NC_017375.1 COG: COG0563; Pfam: PF00406; InterPro: IPR000850; adenylate kinase 778419 adk 12365584 adk Helicobacter pylori 83 adenylate kinase YP_005785362.1 777844 R 585538 CDS YP_005785363.1 385225438 12365585 complement(778436..780169) 1 NC_017375.1 COG: COG0173; Pfam: PF01336,PF00152,PF02938; InterPro: IPR004524; aspartate--tRNA ligase 780169 aspS 12365585 aspS Helicobacter pylori 83 aspartate--tRNA ligase YP_005785363.1 778436 R 585538 CDS YP_005785364.1 385225439 12365586 complement(780204..781145) 1 NC_017375.1 COG: COG0835; Pfam: PF01584,PF00072; InterPro: IPR002545; chemotaxis protein 781145 cheV2 12365586 cheV2 Helicobacter pylori 83 chemotaxis protein YP_005785364.1 780204 R 585538 CDS YP_005785365.1 385225440 12365587 781223..783193 1 NC_017375.1 COG: COG0272; Pfam: PF01653,PF03120,PF03119,PF00533; InterPro: IPR001679; NAD-dependent DNA ligase LigA 783193 ligA 12365587 ligA Helicobacter pylori 83 NAD-dependent DNA ligase LigA YP_005785365.1 781223 D 585538 CDS YP_005785366.1 385225441 12365588 783294..783626 1 NC_017375.1 hypothetical protein 783626 12365588 HMPREF0462_0799 Helicobacter pylori 83 hypothetical protein YP_005785366.1 783294 D 585538 CDS YP_005785367.1 385225442 12365589 complement(783863..783988) 1 NC_017375.1 hypothetical protein 783988 12365589 HMPREF0462_0800 Helicobacter pylori 83 hypothetical protein YP_005785367.1 783863 R 585538 CDS YP_005785368.1 385225443 12365590 784178..784381 1 NC_017375.1 ABC transporter ATP-binding protein 784381 12365590 HMPREF0462_0801 Helicobacter pylori 83 ABC transporter ATP-binding protein YP_005785368.1 784178 D 585538 CDS YP_005785369.1 385225444 12365591 784387..784656 1 NC_017375.1 ABC transporter ATP-binding protein 784656 12365591 HMPREF0462_0802 Helicobacter pylori 83 ABC transporter ATP-binding protein YP_005785369.1 784387 D 585538 CDS YP_005785370.1 385225445 12365592 784656..785405 1 NC_017375.1 COG: COG0842; Pfam: PF01061; multidrug ABC superfamily ATP binding cassette transporter 785405 12365592 HMPREF0462_0803 Helicobacter pylori 83 multidrug ABC superfamily ATP binding cassette transporter YP_005785370.1 784656 D 585538 CDS YP_005785371.1 385225446 12365593 complement(785464..795099) 1 NC_017375.1 COG: COG5651; Pfam: PF03077,PF03797; InterPro: IPR005546; vacuolating cytotoxin (VacA) family protein 795099 12365593 HMPREF0462_0804 Helicobacter pylori 83 vacuolating cytotoxin (VacA) family protein YP_005785371.1 785464 R 585538 CDS YP_005785372.1 385225447 12365594 complement(795191..795760) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 795760 12365594 HMPREF0462_0805 Helicobacter pylori 83 outer membrane protein YP_005785372.1 795191 R 585538 CDS YP_005785373.1 385225448 12365595 complement(795757..798837) 1 NC_017375.1 COG: COG0841; Pfam: PF00873; InterPro: IPR001036; acriflavine resistance protein 798837 acrB 12365595 acrB Helicobacter pylori 83 acriflavine resistance protein YP_005785373.1 795757 R 585538 CDS YP_005785374.1 385225449 12365596 complement(798850..799554) 1 NC_017375.1 COG: COG0845; membrane fusion protein 799554 mtrC 12365596 mtrC Helicobacter pylori 83 membrane fusion protein YP_005785374.1 798850 R 585538 CDS YP_005785375.1 385225450 12365597 complement(799564..800997) 1 NC_017375.1 COG: COG1538; Pfam: PF02321; InterPro: IPR003423; outer membrane protein function unclear 800997 tolC 12365597 tolC Helicobacter pylori 83 outer membrane protein function unclear YP_005785375.1 799564 R 585538 CDS YP_005785376.1 385225451 12365598 complement(801007..802029) 1 NC_017375.1 COG: COG0407; Pfam: PF01208; InterPro: IPR006361; uroporphyrinogen decarboxylase 802029 hemE 12365598 hemE Helicobacter pylori 83 uroporphyrinogen decarboxylase YP_005785376.1 801007 R 585538 CDS YP_005785377.1 385225452 12365599 complement(802097..802714) 1 NC_017375.1 hypothetical protein 802714 12365599 HMPREF0462_0810 Helicobacter pylori 83 hypothetical protein YP_005785377.1 802097 R 585538 CDS YP_005785378.1 385225453 12365600 complement(802711..803367) 1 NC_017375.1 COG: COG2231; Pfam: PF00730,PF00633; InterPro: IPR003265; endonuclease III 803367 12365600 HMPREF0462_0811 Helicobacter pylori 83 endonuclease III YP_005785378.1 802711 R 585538 CDS YP_005785379.1 385225454 12365601 complement(803485..805017) 1 NC_017375.1 COG: COG1344; Pfam: PF00669,PF07196,PF00700; InterPro: IPR001492; flagellin A 805017 flaA 12365601 flaA Helicobacter pylori 83 flagellin A YP_005785379.1 803485 R 585538 CDS YP_005785380.1 385225455 12365602 805408..806283 1 NC_017375.1 ABC transporter ATP-binding protein 806283 spaB 12365602 spaB Helicobacter pylori 83 ABC transporter ATP-binding protein YP_005785380.1 805408 D 585538 CDS YP_005785381.1 385225456 12365603 806243..806962 1 NC_017375.1 COG: COG1132; Pfam: PF00005; InterPro: IPR003439; ABC transporter ATP-binding protein 806962 spaB2 12365603 spaB2 Helicobacter pylori 83 ABC transporter ATP-binding protein YP_005785381.1 806243 D 585538 CDS YP_005785382.1 385225457 12365604 807032..808333 1 NC_017375.1 COG: COG0840; Pfam: PF00015; InterPro: IPR004089; hemolysin secretion protein 808333 hylB 12365604 hylB Helicobacter pylori 83 hemolysin secretion protein YP_005785382.1 807032 D 585538 CDS YP_005785383.1 385225458 12365605 808356..809477 1 NC_017375.1 COG: COG0156; Pfam: PF00155; InterPro: IPR015421; 8-amino-7-oxononanoate synthase 809477 bioF 12365605 bioF Helicobacter pylori 83 8-amino-7-oxononanoate synthase YP_005785383.1 808356 D 585538 CDS YP_005785384.1 385225459 12365606 809477..811456 1 NC_017375.1 COG: COG0744; Pfam: PF00912,PF00905; InterPro: IPR011816; penicillin-binding protein 1A 811456 pbpA 12365606 pbpA Helicobacter pylori 83 penicillin-binding protein 1A YP_005785384.1 809477 D 585538 CDS YP_005785385.1 385225460 12365607 complement(811459..812037) 1 NC_017375.1 tumor necrosis factor alpha-inducing protein 812037 12365607 HMPREF0462_0818 Helicobacter pylori 83 tumor necrosis factor alpha-inducing protein YP_005785385.1 811459 R 585538 CDS YP_005785386.1 385225461 12365609 complement(812511..813980) 1 NC_017375.1 COG: COG1495; Pfam: PF02600; InterPro: IPR003752; DsbB family protein 813980 12365609 HMPREF0462_0819 Helicobacter pylori 83 DsbB family protein YP_005785386.1 812511 R 585538 CDS YP_005785387.1 385225462 12365610 complement(813989..814153) 1 NC_017375.1 hypothetical protein 814153 12365610 HMPREF0462_0820 Helicobacter pylori 83 hypothetical protein YP_005785387.1 813989 R 585538 CDS YP_005785388.1 385225463 12365611 complement(814296..814952) 1 NC_017375.1 hypothetical protein 814952 12365611 HMPREF0462_0821 Helicobacter pylori 83 hypothetical protein YP_005785388.1 814296 R 585538 CDS YP_005785389.1 385225464 12365612 complement(815011..816072) 1 NC_017375.1 COG: COG5610; Pfam: PF00702; hypothetical protein 816072 12365612 HMPREF0462_0822 Helicobacter pylori 83 hypothetical protein YP_005785389.1 815011 R 585538 CDS YP_005785390.1 385225465 12365613 complement(816183..816737) 1 NC_017375.1 COG: COG1014; Pfam: PF01558; InterPro: IPR002869; 2-oxoglutarate:acceptor oxidoreductase 816737 oorC 12365613 oorC Helicobacter pylori 83 2-oxoglutarate:acceptor oxidoreductase YP_005785390.1 816183 R 585538 CDS YP_005785391.1 385225466 12365614 complement(816737..817558) 1 NC_017375.1 COG: COG1013; Pfam: PF02775; InterPro: IPR011766; 2-oxoglutarate:acceptor oxidoreductase 817558 oorB 12365614 oorB Helicobacter pylori 83 2-oxoglutarate:acceptor oxidoreductase YP_005785391.1 816737 R 585538 CDS YP_005785392.1 385225467 12365615 complement(817560..818687) 1 NC_017375.1 COG: COG0674; Pfam: PF01855; InterPro: IPR002880; 2-oxoglutarate:acceptor oxidoreductase 818687 oorA 12365615 oorA Helicobacter pylori 83 2-oxoglutarate:acceptor oxidoreductase YP_005785392.1 817560 R 585538 CDS YP_005785393.1 385225468 12365616 complement(818687..819028) 1 NC_017375.1 COG: COG1146; Pfam: PF00037; 2-oxoglutarate:acceptor oxidoreductase 819028 oorD 12365616 oorD Helicobacter pylori 83 2-oxoglutarate:acceptor oxidoreductase YP_005785393.1 818687 R 585538 CDS YP_005785394.1 385225469 12365617 complement(819207..820145) 1 NC_017375.1 COG: COG1559; Pfam: PF02618; InterPro: IPR003770; aminodeoxychorismate lyase 820145 pabC 12365617 pabC Helicobacter pylori 83 aminodeoxychorismate lyase YP_005785394.1 819207 R 585538 CDS YP_005785395.1 385225470 12365618 820120..823059 1 NC_017375.1 hypothetical protein 823059 12365618 HMPREF0462_0828 Helicobacter pylori 83 hypothetical protein YP_005785395.1 820120 D 585538 CDS YP_005785396.1 385225471 12365619 823056..823286 1 NC_017375.1 COG: COG1918; Pfam: PF04023; InterPro: IPR007167; ferrous iron transport protein A 823286 feoA 12365619 feoA Helicobacter pylori 83 ferrous iron transport protein A YP_005785396.1 823056 D 585538 CDS YP_005785397.1 385225472 12365620 823283..823939 1 NC_017375.1 COG: COG0177; Pfam: PF00730,PF00633; InterPro: IPR005759; endonuclease III 823939 nth 12365620 nth Helicobacter pylori 83 endonuclease III YP_005785397.1 823283 D 585538 CDS YP_005785398.1 385225473 12365621 824021..824392 1 NC_017375.1 COG: COG1886; Pfam: PF01052; InterPro: IPR012826; flagellar switch protein 824392 fliN 12365621 fliN Helicobacter pylori 83 flagellar switch protein YP_005785398.1 824021 D 585538 CDS YP_005785399.1 385225474 12365622 824389..825054 1 NC_017375.1 hypothetical protein 825054 12365622 HMPREF0462_0832 Helicobacter pylori 83 hypothetical protein YP_005785399.1 824389 D 585538 CDS YP_005785400.1 385225475 12365623 825066..825263 1 NC_017375.1 hypothetical protein 825263 12365623 HMPREF0462_0833 Helicobacter pylori 83 hypothetical protein YP_005785400.1 825066 D 585538 CDS YP_005785401.1 385225476 12365624 825247..826203 1 NC_017375.1 COG: COG0810; InterPro: IPR006260; siderophore-mediated iron transport protein 826203 12365624 HMPREF0462_0834 Helicobacter pylori 83 siderophore-mediated iron transport protein YP_005785401.1 825247 D 585538 CDS YP_005785402.1 385225477 12365625 826207..827226 1 NC_017375.1 COG: COG0418; InterPro: IPR004721; dihydroorotase 827226 pyrC2 12365625 pyrC2 Helicobacter pylori 83 dihydroorotase YP_005785402.1 826207 D 585538 CDS YP_005785403.1 385225478 12365626 827244..828320 1 NC_017375.1 hypothetical protein 828320 12365626 HMPREF0462_0836 Helicobacter pylori 83 hypothetical protein YP_005785403.1 827244 D 585538 CDS YP_005785404.1 385225479 12365627 828408..828881 1 NC_017375.1 hypothetical protein 828881 12365627 HMPREF0462_0837 Helicobacter pylori 83 hypothetical protein YP_005785404.1 828408 D 585538 CDS YP_005785405.1 385225480 12365628 828887..830917 1 NC_017375.1 Pfam: PF00884; InterPro: IPR000917; hypothetical protein 830917 12365628 HMPREF0462_0838 Helicobacter pylori 83 hypothetical protein YP_005785405.1 828887 D 585538 CDS YP_005785406.1 385225481 12365629 830989..831882 1 NC_017375.1 COG: COG0190; Pfam: PF00763,PF02882; InterPro: IPR000672; bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase 831882 folD 12365629 folD Helicobacter pylori 83 bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase YP_005785406.1 830989 D 585538 CDS YP_005785407.1 385225482 12365630 831882..832754 1 NC_017375.1 COG: COG0681; Pfam: PF00717; InterPro: IPR000223; signal peptidase I LepB 832754 lepB 12365630 lepB Helicobacter pylori 83 signal peptidase I LepB YP_005785407.1 831882 D 585538 CDS YP_005785408.1 385225483 12365631 832763..833461 1 NC_017375.1 COG: COG1994; Pfam: PF02163; InterPro: IPR008915; peptidase M50 833461 12365631 HMPREF0462_0841 Helicobacter pylori 83 peptidase M50 YP_005785408.1 832763 D 585538 CDS YP_005785409.1 385225484 12365632 833482..833937 1 NC_017375.1 COG: COG0698; Pfam: PF02502; InterPro: IPR003500; ribose 5-phosphate isomerase B 833937 rpiB 12365632 rpiB Helicobacter pylori 83 ribose 5-phosphate isomerase B YP_005785409.1 833482 D 585538 CDS YP_005785410.1 385225485 12365633 833990..834322 1 NC_017375.1 membrane protein 834322 12365633 HMPREF0462_0843 Helicobacter pylori 83 membrane protein YP_005785410.1 833990 D 585538 CDS YP_005785411.1 385225486 12365634 834380..834919 1 NC_017375.1 COG: COG0503; Pfam: PF00156; InterPro: IPR005764; adenine phosphoribosyltransferase 834919 apt 12365634 apt Helicobacter pylori 83 adenine phosphoribosyltransferase YP_005785411.1 834380 D 585538 CDS YP_005785412.1 385225487 12365635 834934..835512 1 NC_017375.1 COG: COG0586; DedA family protein 835512 12365635 HMPREF0462_0845 Helicobacter pylori 83 DedA family protein YP_005785412.1 834934 D 585538 CDS YP_005785413.1 385225488 12365636 835574..837064 1 NC_017375.1 COG: COG0260; Pfam: PF02789,PF00883; InterPro: IPR011356; cytosol aminopeptidase 837064 pepA 12365636 pepA Helicobacter pylori 83 cytosol aminopeptidase YP_005785413.1 835574 D 585538 CDS YP_005785414.1 385225489 12365637 837066..838166 1 NC_017375.1 COG: COG0012; Pfam: PF01926,PF06071; InterPro: IPR004396; GTP-binding protein YchF 838166 ychF 12365637 ychF Helicobacter pylori 83 GTP-binding protein YchF YP_005785414.1 837066 D 585538 CDS YP_005785415.1 385225490 12365638 838200..839072 1 NC_017375.1 Pfam: PF04055; radical SAM 839072 12365638 HMPREF0462_0848 Helicobacter pylori 83 radical SAM YP_005785415.1 838200 D 585538 CDS YP_005785416.1 385225491 12365639 complement(839202..840248) 1 NC_017375.1 COG: COG0628; Pfam: PF01594; InterPro: IPR002549; membrane protein 840248 12365639 HMPREF0462_0849 Helicobacter pylori 83 membrane protein YP_005785416.1 839202 R 585538 CDS YP_005785417.1 385225492 12365640 840364..841200 1 NC_017375.1 COG: COG0253; Pfam: PF01678; InterPro: IPR001653; diaminopimelate epimerase 841200 dapF 12365640 dapF Helicobacter pylori 83 diaminopimelate epimerase YP_005785417.1 840364 D 585538 CDS YP_005785418.1 385225493 12365641 841291..841938 1 NC_017375.1 COG: COG3059; Pfam: PF04224; InterPro: IPR007339; hypothetical protein 841938 12365641 HMPREF0462_0851 Helicobacter pylori 83 hypothetical protein YP_005785418.1 841291 D 585538 CDS YP_005785419.1 385225494 12365642 complement(841962..842207) 1 NC_017375.1 hypothetical protein 842207 12365642 HMPREF0462_0852 Helicobacter pylori 83 hypothetical protein YP_005785419.1 841962 R 585538 CDS YP_005785420.1 385225495 12365643 842485..843630 1 NC_017375.1 hypothetical protein 843630 12365643 HMPREF0462_0853 Helicobacter pylori 83 hypothetical protein YP_005785420.1 842485 D 585538 CDS YP_005785421.1 385225496 12365644 843690..843944 1 NC_017375.1 COG: COG0828; Pfam: PF01165; InterPro: IPR001911; 30S ribosomal protein S21 843944 rpsU 12365644 rpsU Helicobacter pylori 83 30S ribosomal protein S21 YP_005785421.1 843690 D 585538 CDS YP_005785422.1 385225497 12365645 843981..844724 1 NC_017375.1 COG: COG1028; Pfam: PF00106; InterPro: IPR016040; 3-oxoacyl-ACP reductase 844724 fabG 12365645 fabG Helicobacter pylori 83 3-oxoacyl-ACP reductase YP_005785422.1 843981 D 585538 CDS YP_005785423.1 385225498 12365646 844955..845191 1 NC_017375.1 COG: COG0236; Pfam: PF00550; InterPro: IPR003231; acyl carrier protein 845191 12365646 HMPREF0462_0856 Helicobacter pylori 83 acyl carrier protein YP_005785423.1 844955 D 585538 CDS YP_005785424.1 385225499 12365647 845517..846731 1 NC_017375.1 COG: COG0304; Pfam: PF00109,PF02801; InterPro: IPR000794; 3-oxoacyl-(acyl-carrier-protein) synthase II 846731 fabF 12365647 fabF Helicobacter pylori 83 3-oxoacyl-(acyl-carrier-protein) synthase II YP_005785424.1 845517 D 585538 CDS YP_005785425.1 385225500 12365648 846754..847692 1 NC_017375.1 COG: COG0825; Pfam: PF03255,PF01039; InterPro: IPR001095; acetyl-coA carboxylase carboxyl transferase subunit alpha 847692 accA 12365648 accA Helicobacter pylori 83 acetyl-coA carboxylase carboxyl transferase subunit alpha YP_005785425.1 846754 D 585538 CDS YP_005785426.1 385225501 12365649 complement(847772..847951) 1 NC_017375.1 hypothetical protein 847951 12365649 HMPREF0462_0859 Helicobacter pylori 83 hypothetical protein YP_005785426.1 847772 R 585538 CDS YP_005785427.1 385225502 12365650 848160..848597 1 NC_017375.1 hypothetical protein 848597 12365650 HMPREF0462_0860 Helicobacter pylori 83 hypothetical protein YP_005785427.1 848160 D 585538 CDS YP_005785428.1 385225503 12365651 complement(848668..849489) 1 NC_017375.1 hypothetical protein 849489 12365651 HMPREF0462_0861 Helicobacter pylori 83 hypothetical protein YP_005785428.1 848668 R 585538 CDS YP_005785429.1 385225504 12365652 complement(849486..850451) 1 NC_017375.1 hypothetical protein 850451 12365652 HMPREF0462_0862 Helicobacter pylori 83 hypothetical protein YP_005785429.1 849486 R 585538 CDS YP_005785430.1 385225505 12365653 complement(850464..851147) 1 NC_017375.1 COG: COG0566; Pfam: PF08032,PF00588; InterPro: IPR004441; RNA methyltransferase 851147 12365653 HMPREF0462_0863 Helicobacter pylori 83 RNA methyltransferase YP_005785430.1 850464 R 585538 CDS YP_005785431.1 385225506 12365654 complement(851160..852023) 1 NC_017375.1 COG: COG0313; Pfam: PF00590; InterPro: IPR008189; tetrapyrrole methylase 852023 12365654 HMPREF0462_0864 Helicobacter pylori 83 tetrapyrrole methylase YP_005785431.1 851160 R 585538 CDS YP_005785432.1 385225507 12365655 complement(852048..852251) 1 NC_017375.1 COG: COG0254; Pfam: PF01197; InterPro: IPR002150; 50S ribosomal protein L31 852251 rpmE 12365655 rpmE Helicobacter pylori 83 50S ribosomal protein L31 YP_005785432.1 852048 R 585538 CDS YP_005785433.1 385225508 12365656 852516..853832 1 NC_017375.1 COG: COG1158; Pfam: PF07498,PF07497,PF00006; InterPro: IPR004665; transcription termination factor Rho 853832 rho 12365656 rho Helicobacter pylori 83 transcription termination factor Rho YP_005785433.1 852516 D 585538 CDS YP_005785434.1 385225509 12365657 853869..854636 1 NC_017375.1 COG: COG0796; Pfam: PF01177; InterPro: IPR004391; glutamate racemase 854636 murI 12365657 murI Helicobacter pylori 83 glutamate racemase YP_005785434.1 853869 D 585538 CDS YP_005785435.1 385225510 12365658 854782..855033 1 NC_017375.1 Pfam: PF07282; InterPro: IPR010095; transposase 855033 tnpB3 12365658 tnpB3 Helicobacter pylori 83 transposase YP_005785435.1 854782 D 585538 CDS YP_005785436.1 385225511 12365659 complement(855121..858651) 1 NC_017375.1 Pfam: PF03507; InterPro: IPR005169; cytotoxicity-associated immunodominantigen 858651 12365659 HMPREF0462_0869 Helicobacter pylori 83 cytotoxicity-associated immunodominantigen YP_005785436.1 855121 R 585538 CDS YP_005785437.1 385225512 12365660 858903..859130 1 NC_017375.1 cag pathogenicity island protein B 859130 cagB 12365660 cagB Helicobacter pylori 83 cag pathogenicity island protein B YP_005785437.1 858903 D 585538 CDS YP_005785438.1 385225513 12365661 859304..859651 1 NC_017375.1 cag pathogenicity island protein 859651 12365661 HMPREF0462_0871 Helicobacter pylori 83 cag pathogenicity island protein YP_005785438.1 859304 D 585538 CDS YP_005785439.1 385225514 12365662 859635..860276 1 NC_017375.1 cag pathogenicity island protein 860276 12365662 HMPREF0462_0872 Helicobacter pylori 83 cag pathogenicity island protein YP_005785439.1 859635 D 585538 CDS YP_005785440.1 385225515 12365663 860285..863236 1 NC_017375.1 COG: COG3451; Pfam: PF03135; InterPro: IPR004346; cag pathogenicity island protein E VirB4 family protein 863236 cagE 12365663 cagE Helicobacter pylori 83 cag pathogenicity island protein E VirB4 family protein YP_005785440.1 860285 D 585538 CDS YP_005785441.1 385225516 12365664 863238..864044 1 NC_017375.1 cag pathogenicity island protein 864044 12365664 HMPREF0462_0874 Helicobacter pylori 83 cag pathogenicity island protein YP_005785441.1 863238 D 585538 CDS YP_005785442.1 385225517 12365665 864099..864530 1 NC_017375.1 cag pathogenicity island protein 864530 12365665 HMPREF0462_0875 Helicobacter pylori 83 cag pathogenicity island protein YP_005785442.1 864099 D 585538 CDS YP_005785443.1 385225518 12365666 864532..865644 1 NC_017375.1 cag pathogenicity island protein 865644 12365666 HMPREF0462_0876 Helicobacter pylori 83 cag pathogenicity island protein YP_005785443.1 864532 D 585538 CDS YP_005785444.1 385225519 12365667 865655..866800 1 NC_017375.1 cag pathogenicity island protein 866800 12365667 HMPREF0462_0877 Helicobacter pylori 83 cag pathogenicity island protein YP_005785444.1 865655 D 585538 CDS YP_005785445.1 385225520 12365668 866797..867510 1 NC_017375.1 cag pathogenicity island protein 867510 12365668 HMPREF0462_0878 Helicobacter pylori 83 cag pathogenicity island protein YP_005785445.1 866797 D 585538 CDS YP_005785446.1 385225521 12365669 complement(867593..868513) 1 NC_017375.1 cag pathogenicity island protein 868513 12365669 HMPREF0462_0879 Helicobacter pylori 83 cag pathogenicity island protein YP_005785446.1 867593 R 585538 CDS YP_005785447.1 385225522 12365670 complement(868528..869658) 1 NC_017375.1 cag pathogenicity island protein 869658 12365670 HMPREF0462_0880 Helicobacter pylori 83 cag pathogenicity island protein YP_005785447.1 868528 R 585538 CDS YP_005785448.1 385225523 12365671 870082..870426 1 NC_017375.1 cag pathogenicity island protein 870426 12365671 HMPREF0462_0881 Helicobacter pylori 83 cag pathogenicity island protein YP_005785448.1 870082 D 585538 CDS YP_005785449.1 385225524 12365672 complement(871076..871231) 1 NC_017375.1 hypothetical protein 871231 12365672 HMPREF0462_0882 Helicobacter pylori 83 hypothetical protein YP_005785449.1 871076 R 585538 CDS YP_005785450.1 385225525 12365673 complement(871287..871667) 1 NC_017375.1 cag pathogenicity island protein 871667 12365673 HMPREF0462_0883 Helicobacter pylori 83 cag pathogenicity island protein YP_005785450.1 871287 R 585538 CDS YP_005785451.1 385225526 12365674 complement(872007..872138) 1 NC_017375.1 hypothetical protein 872138 12365674 HMPREF0462_0884 Helicobacter pylori 83 hypothetical protein YP_005785451.1 872007 R 585538 CDS YP_005785452.1 385225527 12365675 872174..872299 1 NC_017375.1 hypothetical protein 872299 12365675 HMPREF0462_0885 Helicobacter pylori 83 hypothetical protein YP_005785452.1 872174 D 585538 CDS YP_005785453.1 385225528 12365676 872478..873077 1 NC_017375.1 CAG pathogenicity island protein 13 873077 12365676 HMPREF0462_0886 Helicobacter pylori 83 CAG pathogenicity island protein 13 YP_005785453.1 872478 D 585538 CDS YP_005785454.1 385225529 12365677 complement(873279..874121) 1 NC_017375.1 CAG pathogenicity island protein 12 874121 12365677 HMPREF0462_0887 Helicobacter pylori 83 CAG pathogenicity island protein 12 YP_005785454.1 873279 R 585538 CDS YP_005785455.1 385225530 12365678 complement(874137..874784) 1 NC_017375.1 cag pathogenicity island protein 874784 12365678 HMPREF0462_0888 Helicobacter pylori 83 cag pathogenicity island protein YP_005785455.1 874137 R 585538 CDS YP_005785456.1 385225531 12365679 875058..875816 1 NC_017375.1 COG: COG3736; Pfam: PF04335; InterPro: IPR007430; cag pathogenicity island protein 875816 12365679 HMPREF0462_0889 Helicobacter pylori 83 cag pathogenicity island protein YP_005785456.1 875058 D 585538 CDS YP_005785457.1 385225532 12365680 875821..877428 1 NC_017375.1 cag pathogenicity island protein 877428 12365680 HMPREF0462_0890 Helicobacter pylori 83 cag pathogenicity island protein YP_005785457.1 875821 D 585538 CDS YP_005785458.1 385225533 12365681 877481..879046 1 NC_017375.1 COG: COG3504; Pfam: PF03524; InterPro: IPR010258; cag pathogenicity island protein 879046 12365681 HMPREF0462_0891 Helicobacter pylori 83 cag pathogenicity island protein YP_005785458.1 877481 D 585538 CDS YP_005785459.1 385225534 12365682 879061..880947 1 NC_017375.1 Pfam: PF07337; InterPro: IPR010853; hypothetical protein 880947 12365682 HMPREF0462_0892 Helicobacter pylori 83 hypothetical protein YP_005785459.1 879061 D 585538 CDS YP_005785460.1 385225535 12365683 880977..884453 1 NC_017375.1 COG: COG2948; Pfam: PF07337,PF03743; InterPro: IPR010853; DC-EC Repeat superfamily protein 884453 12365683 HMPREF0462_0893 Helicobacter pylori 83 DC-EC Repeat superfamily protein YP_005785460.1 880977 D 585538 CDS YP_005785461.1 385225536 12365684 884443..884577 1 NC_017375.1 hypothetical protein 884577 12365684 HMPREF0462_0894 Helicobacter pylori 83 hypothetical protein YP_005785461.1 884443 D 585538 CDS YP_005785462.1 385225537 12365685 884590..885189 1 NC_017375.1 Pfam: PF09053; InterPro: IPR015139; cag pathogenicity island protein 885189 12365685 HMPREF0462_0895 Helicobacter pylori 83 cag pathogenicity island protein YP_005785462.1 884590 D 585538 CDS YP_005785463.1 385225538 12365686 885179..886186 1 NC_017375.1 COG: COG0630; Pfam: PF00437; InterPro: IPR001482; P-type DNA transfer ATPase VirB11 886186 12365686 HMPREF0462_0896 Helicobacter pylori 83 P-type DNA transfer ATPase VirB11 YP_005785463.1 885179 D 585538 CDS YP_005785464.1 385225539 12365687 886195..888441 1 NC_017375.1 COG: COG3505; Pfam: PF02534; InterPro: IPR003688; cag pathogenicity island protein 888441 12365687 HMPREF0462_0897 Helicobacter pylori 83 cag pathogenicity island protein YP_005785464.1 886195 D 585538 CDS YP_005785465.1 385225540 12365688 complement(888749..889258) 1 NC_017375.1 cag pathogenicity island protein 889258 12365688 HMPREF0462_0898 Helicobacter pylori 83 cag pathogenicity island protein YP_005785465.1 888749 R 585538 CDS YP_005785466.1 385225541 12365689 complement(889268..890713) 1 NC_017375.1 cag pathogenicity island protein 890713 12365689 HMPREF0462_0899 Helicobacter pylori 83 cag pathogenicity island protein YP_005785466.1 889268 R 585538 CDS YP_005785467.1 385225542 12365690 complement(890729..890926) 1 NC_017375.1 cag pathogenicity island protein (cage, cag2) 890926 12365690 HMPREF0462_0900 Helicobacter pylori 83 cag pathogenicity island protein (cage, cag2) YP_005785467.1 890729 R 585538 CDS YP_005785468.1 385225543 12365691 complement(890942..891289) 1 NC_017375.1 cag pathogenicity island protein 891289 12365691 HMPREF0462_0901 Helicobacter pylori 83 cag pathogenicity island protein YP_005785468.1 890942 R 585538 CDS YP_005785469.1 385225544 12365692 891400..892293 1 NC_017375.1 Pfam: PF08238; InterPro: IPR011990; Sel1 repeat superfamily protein 892293 12365692 HMPREF0462_0902 Helicobacter pylori 83 Sel1 repeat superfamily protein YP_005785469.1 891400 D 585538 CDS YP_005785470.1 385225545 12365693 complement(892337..893329) 1 NC_017375.1 COG: COG3034; hypothetical protein 893329 12365693 HMPREF0462_0903 Helicobacter pylori 83 hypothetical protein YP_005785470.1 892337 R 585538 CDS YP_005785471.1 385225546 12365694 complement(893326..894231) 1 NC_017375.1 COG: COG1159; Pfam: PF01926,PF07650; InterPro: IPR005662; GTP-binding protein Era 894231 era 12365694 era Helicobacter pylori 83 GTP-binding protein Era YP_005785471.1 893326 R 585538 CDS YP_005785472.1 385225547 12365695 complement(894231..895562) 1 NC_017375.1 COG: COG1220; Pfam: PF07724; InterPro: IPR004491; ATP-dependent hsl protease ATP-binding subunit HslU 895562 hslU 12365695 hslU Helicobacter pylori 83 ATP-dependent hsl protease ATP-binding subunit HslU YP_005785472.1 894231 R 585538 CDS YP_005785473.1 385225548 12365696 complement(895562..896104) 1 NC_017375.1 COG: COG5405; Pfam: PF00227; InterPro: IPR001353; ATP-dependent protease HslVU 896104 hslV 12365696 hslV Helicobacter pylori 83 ATP-dependent protease HslVU YP_005785473.1 895562 R 585538 CDS YP_005785474.1 385225549 12365697 complement(896108..896557) 1 NC_017375.1 COG: COG0359; Pfam: PF01281,PF03948; InterPro: IPR000244; 50S ribosomal protein L9 896557 rplI 12365697 rplI Helicobacter pylori 83 50S ribosomal protein L9 YP_005785474.1 896108 R 585538 CDS YP_005785475.1 385225550 12365698 complement(896620..898602) 1 NC_017375.1 COG: COG1479; Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein 898602 12365698 HMPREF0462_0908 Helicobacter pylori 83 hypothetical protein YP_005785475.1 896620 R 585538 CDS YP_005785476.1 385225551 12365699 898832..900277 1 NC_017375.1 COG: COG0174; Pfam: PF03951,PF00120; InterPro: IPR004809; glutamine synthetase 900277 glnA 12365699 glnA Helicobacter pylori 83 glutamine synthetase YP_005785476.1 898832 D 585538 CDS YP_005785477.1 385225552 12365700 complement(900305..900472) 1 NC_017375.1 hypothetical protein 900472 12365700 HMPREF0462_0910 Helicobacter pylori 83 hypothetical protein YP_005785477.1 900305 R 585538 CDS YP_005785478.1 385225553 12365701 complement(900576..900743) 1 NC_017375.1 urease-enhancing factor 900743 lpp 12365701 lpp Helicobacter pylori 83 urease-enhancing factor YP_005785478.1 900576 R 585538 CDS YP_005785479.1 385225554 12365702 complement(901020..901784) 1 NC_017375.1 COG: COG0289; Pfam: PF01113,PF05173; InterPro: IPR011770; dihydrodipicolinate reductase 901784 dapB 12365702 dapB Helicobacter pylori 83 dihydrodipicolinate reductase YP_005785479.1 901020 R 585538 CDS YP_005785480.1 385225555 12365703 complement(901807..903186) 1 NC_017375.1 COG: COG0277; Pfam: PF01565,PF02913; InterPro: IPR004490; glycolate oxidase 903186 glcD 12365703 glcD Helicobacter pylori 83 glycolate oxidase YP_005785480.1 901807 R 585538 CDS YP_005785481.1 385225556 12365704 complement(903188..904513) 1 NC_017375.1 plasminogen-binding protein PgbA 904513 12365704 HMPREF0462_0914 Helicobacter pylori 83 plasminogen-binding protein PgbA YP_005785481.1 903188 R 585538 CDS YP_005785482.1 385225557 12365705 complement(904516..905154) 1 NC_017375.1 COG: COG0494; Pfam: PF00293; InterPro: IPR000086; UDP-sugar diphosphatase 905154 nudT14 12365705 nudT14 Helicobacter pylori 83 UDP-sugar diphosphatase YP_005785482.1 904516 R 585538 CDS YP_005785483.1 385225558 12365706 complement(905154..906365) 1 NC_017375.1 COG: COG0739; Pfam: PF01551; InterPro: IPR002886; M23/M37 family peptidase 906365 12365706 HMPREF0462_0916 Helicobacter pylori 83 M23/M37 family peptidase YP_005785483.1 905154 R 585538 CDS YP_005785484.1 385225559 12365707 906804..907193 1 NC_017375.1 HrgC 907193 12365707 HMPREF0462_0917 Helicobacter pylori 83 HrgC YP_005785484.1 906804 D 585538 CDS YP_005785485.1 385225560 12365708 complement(907289..909610) 1 NC_017375.1 COG: COG0187; Pfam: PF02518,PF00204,PF01751,PF00986; InterPro: IPR011557; DNA topoisomerase subunit B 909610 gyrB 12365708 gyrB Helicobacter pylori 83 DNA topoisomerase subunit B YP_005785485.1 907289 R 585538 CDS YP_005785486.1 385225561 12365709 complement(909623..910747) 1 NC_017375.1 COG: COG0592; Pfam: PF00712,PF02767,PF02768; InterPro: IPR001001; DNA-directed DNA polymerase III subunit beta 910747 dnaN 12365709 dnaN Helicobacter pylori 83 DNA-directed DNA polymerase III subunit beta YP_005785486.1 909623 R 585538 CDS YP_005785487.1 385225562 12365710 complement(910804..911871) 1 NC_017375.1 COG: COG2829; Pfam: PF02253; InterPro: IPR003187; phospholipase A 911871 pldA 12365710 pldA Helicobacter pylori 83 phospholipase A YP_005785487.1 910804 R 585538 CDS YP_005785488.1 385225563 12365711 complement(911886..913214) 1 NC_017375.1 COG: COG0733; Pfam: PF00209; InterPro: IPR000175; NSS family amino acid:sodium (Na+) symporter 913214 12365711 HMPREF0462_0921 Helicobacter pylori 83 NSS family amino acid:sodium (Na+) symporter YP_005785488.1 911886 R 585538 CDS YP_005785489.1 385225564 12365712 complement(913225..914553) 1 NC_017375.1 COG: COG0733; Pfam: PF00209; InterPro: IPR000175; NSS family amino acid:sodium (Na+) symporter 914553 12365712 HMPREF0462_0922 Helicobacter pylori 83 NSS family amino acid:sodium (Na+) symporter YP_005785489.1 913225 R 585538 CDS YP_005785490.1 385225565 12365713 914785..915186 1 NC_017375.1 COG: COG0824; Pfam: PF03061; InterPro: IPR006684; thioesterase 915186 12365713 HMPREF0462_0923 Helicobacter pylori 83 thioesterase YP_005785490.1 914785 D 585538 CDS YP_005785491.1 385225566 12365714 915176..915436 1 NC_017375.1 hypothetical protein 915436 12365714 HMPREF0462_0924 Helicobacter pylori 83 hypothetical protein YP_005785491.1 915176 D 585538 CDS YP_005785492.1 385225567 12365715 complement(915433..916701) 1 NC_017375.1 COG: COG0771; Pfam: PF08245,PF02875; InterPro: IPR005762; UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase 916701 murD 12365715 murD Helicobacter pylori 83 UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase YP_005785492.1 915433 R 585538 CDS YP_005785493.1 385225568 12365716 complement(916703..917785) 1 NC_017375.1 COG: COG0472; Pfam: PF00953; InterPro: IPR003524; phospho-N-acetylmuramoyl-pentapeptide- transferase 917785 mraY 12365716 mraY Helicobacter pylori 83 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_005785493.1 916703 R 585538 CDS YP_005785494.1 385225569 12365717 917891..918739 1 NC_017375.1 Pfam: PF05211; InterPro: IPR007876; neuraminyllactose-binding hemagglutinin 918739 hpaA 12365717 hpaA Helicobacter pylori 83 neuraminyllactose-binding hemagglutinin YP_005785494.1 917891 D 585538 CDS YP_005785495.1 385225570 12365718 918832..919020 1 NC_017375.1 COG: COG0227; Pfam: PF00830; InterPro: IPR001383; 50S ribosomal protein L28 919020 rpmB 12365718 rpmB Helicobacter pylori 83 50S ribosomal protein L28 YP_005785495.1 918832 D 585538 CDS YP_005785496.1 385225571 12365719 919164..920306 1 NC_017375.1 COG: COG1226; Pfam: PF02254,PF02080; InterPro: IPR016040; potassium channel protein 920306 12365719 HMPREF0462_0929 Helicobacter pylori 83 potassium channel protein YP_005785496.1 919164 D 585538 CDS YP_005785497.1 385225572 12365720 complement(920338..920703) 1 NC_017375.1 hypothetical protein 920703 12365720 HMPREF0462_0930 Helicobacter pylori 83 hypothetical protein YP_005785497.1 920338 R 585538 CDS YP_005785498.1 385225573 12365721 complement(920716..923151) 1 NC_017375.1 hypothetical protein 923151 12365721 HMPREF0462_0931 Helicobacter pylori 83 hypothetical protein YP_005785498.1 920716 R 585538 CDS YP_005785499.1 385225574 12365722 complement(923203..923754) 1 NC_017375.1 COG: COG0632; Pfam: PF01330,PF07499; InterPro: IPR000085; crossover junction ATP-dependent DNA helicase RuvA 923754 ruvA 12365722 ruvA Helicobacter pylori 83 crossover junction ATP-dependent DNA helicase RuvA YP_005785499.1 923203 R 585538 CDS YP_005785500.1 385225575 12365723 complement(923781..925625) 1 NC_017375.1 hypothetical protein 925625 12365723 HMPREF0462_0933 Helicobacter pylori 83 hypothetical protein YP_005785500.1 923781 R 585538 CDS YP_005785501.1 385225576 12365724 925718..927178 1 NC_017375.1 COG: COG0728; Pfam: PF03023; InterPro: IPR004268; integral membrane protein MviN 927178 mviN 12365724 mviN Helicobacter pylori 83 integral membrane protein MviN YP_005785501.1 925718 D 585538 CDS YP_005785502.1 385225577 12365725 927179..928576 1 NC_017375.1 COG: COG0215; Pfam: PF01406; InterPro: IPR002308; cysteine--tRNA ligase 928576 cysS 12365725 cysS Helicobacter pylori 83 cysteine--tRNA ligase YP_005785502.1 927179 D 585538 CDS YP_005785503.1 385225578 12365726 928800..932690 1 NC_017375.1 COG: COG5651; Pfam: PF02691,PF03797; InterPro: IPR003842; vacuolating cytotoxin 932690 12365726 HMPREF0462_0936 Helicobacter pylori 83 vacuolating cytotoxin YP_005785503.1 928800 D 585538 CDS YP_005785504.1 385225579 12365727 complement(932751..933518) 1 NC_017375.1 COG: COG1120; Pfam: PF00005; InterPro: IPR003593; phosphonate ABC superfamily ATP binding cassette transporter, ABC protein 933518 phnC 12365727 phnC Helicobacter pylori 83 phosphonate ABC superfamily ATP binding cassette transporter, ABC protein YP_005785504.1 932751 R 585538 CDS YP_005785505.1 385225580 12365728 complement(933518..934234) 1 NC_017375.1 COG: COG0609; Pfam: PF01032; InterPro: IPR000522; iron(III) ABC superfamily ATP binding cassette transporter, membrane protein 934234 fecD 12365728 fecD Helicobacter pylori 83 iron(III) ABC superfamily ATP binding cassette transporter, membrane protein YP_005785505.1 933518 R 585538 CDS YP_005785506.1 385225581 12365729 complement(934234..934497) 1 NC_017375.1 Pfam: PF01032; InterPro: IPR000522; iron(III) ABC superfamily ATP binding cassette transporter, membrane protein 934497 fecD2 12365729 fecD2 Helicobacter pylori 83 iron(III) ABC superfamily ATP binding cassette transporter, membrane protein YP_005785506.1 934234 R 585538 CDS YP_005785507.1 385225582 12365730 complement(934490..935332) 1 NC_017375.1 COG: COG1028; Pfam: PF00106; InterPro: IPR016040; short chain dehydrogenase 935332 12365730 HMPREF0462_0940 Helicobacter pylori 83 short chain dehydrogenase YP_005785507.1 934490 R 585538 CDS YP_005785508.1 385225583 12365731 935472..935996 1 NC_017375.1 COG: COG1607; Pfam: PF03061; InterPro: IPR006683; VdlD family protein 935996 12365731 HMPREF0462_0941 Helicobacter pylori 83 VdlD family protein YP_005785508.1 935472 D 585538 CDS YP_005785509.1 385225584 12365732 complement(936342..936653) 1 NC_017375.1 hypothetical protein 936653 12365732 HMPREF0462_0942 Helicobacter pylori 83 hypothetical protein YP_005785509.1 936342 R 585538 CDS YP_005785510.1 385225585 12365733 complement(936822..937106) 1 NC_017375.1 COG: COG3309; Pfam: PF04605; InterPro: IPR007683; virulence-associated protein D 937106 12365733 HMPREF0462_0943 Helicobacter pylori 83 virulence-associated protein D YP_005785510.1 936822 R 585538 CDS YP_005785511.1 385225586 12365734 complement(937087..937479) 1 NC_017375.1 hypothetical protein 937479 12365734 HMPREF0462_0944 Helicobacter pylori 83 hypothetical protein YP_005785511.1 937087 R 585538 CDS YP_005785512.1 385225587 12365737 940927..941448 1 NC_017375.1 hypothetical protein 941448 12365737 HMPREF0462_0946 Helicobacter pylori 83 hypothetical protein YP_005785512.1 940927 D 585538 CDS YP_005785513.1 385225588 12365738 complement(941399..942511) 1 NC_017375.1 COG: COG0409; Pfam: PF01924; InterPro: IPR002780; hydrogenase expression/formation protein HypD 942511 hypD 12365738 hypD Helicobacter pylori 83 hydrogenase expression/formation protein HypD YP_005785513.1 941399 R 585538 CDS YP_005785514.1 385225589 12365739 complement(942539..942775) 1 NC_017375.1 COG: COG0298; Pfam: PF01455; InterPro: IPR001109; hydrogenase assembly chaperone HypC/HupF 942775 hypC 12365739 hypC Helicobacter pylori 83 hydrogenase assembly chaperone HypC/HupF YP_005785514.1 942539 R 585538 CDS YP_005785515.1 385225590 12365740 complement(942775..943503) 1 NC_017375.1 COG: COG0378; Pfam: PF02492; InterPro: IPR004392; hydrogenase nickel incorporation protein HypB 943503 hypB 12365740 hypB Helicobacter pylori 83 hydrogenase nickel incorporation protein HypB YP_005785515.1 942775 R 585538 CDS YP_005785516.1 385225591 12365741 complement(943752..944051) 1 NC_017375.1 COG: COG1917; hypothetical protein 944051 12365741 HMPREF0462_0950 Helicobacter pylori 83 hypothetical protein YP_005785516.1 943752 R 585538 CDS YP_005785517.1 385225592 12365742 complement(944062..944418) 1 NC_017375.1 COG: COG0282; Pfam: PF00871; InterPro: IPR004372; acetate kinase 944418 ackA 12365742 ackA Helicobacter pylori 83 acetate kinase YP_005785517.1 944062 R 585538 CDS YP_005785518.1 385225593 12365743 complement(944381..944641) 1 NC_017375.1 COG: COG0282; Pfam: PF00871; InterPro: IPR004372; acetate kinase 944641 ackA2 12365743 ackA2 Helicobacter pylori 83 acetate kinase YP_005785518.1 944381 R 585538 CDS YP_005785519.1 385225594 12365744 complement(944943..945320) 1 NC_017375.1 COG: COG0282; Pfam: PF00871; InterPro: IPR004372; acetate kinase 945320 ackA3 12365744 ackA3 Helicobacter pylori 83 acetate kinase YP_005785519.1 944943 R 585538 CDS YP_005785520.1 385225595 12365745 complement(945338..946006) 1 NC_017375.1 COG: COG0280; Pfam: PF01515; InterPro: IPR002505; phosphate acetyltransferase 946006 pta 12365745 pta Helicobacter pylori 83 phosphate acetyltransferase YP_005785520.1 945338 R 585538 CDS YP_005785521.1 385225596 12365746 complement(945999..946526) 1 NC_017375.1 Pfam: PF01515; InterPro: IPR002505; phosphate acetyltransferase 946526 pta2 12365746 pta2 Helicobacter pylori 83 phosphate acetyltransferase YP_005785521.1 945999 R 585538 CDS YP_005785522.1 385225597 12365747 complement(946742..946945) 1 NC_017375.1 phosphate acetyltransferase 946945 pta3 12365747 pta3 Helicobacter pylori 83 phosphate acetyltransferase YP_005785522.1 946742 R 585538 CDS YP_005785523.1 385225598 12365748 947152..948726 1 NC_017375.1 Pfam: PF02120; hypothetical protein 948726 12365748 HMPREF0462_0957 Helicobacter pylori 83 hypothetical protein YP_005785523.1 947152 D 585538 CDS YP_005785524.1 385225599 12365749 948777..949736 1 NC_017375.1 COG: COG1843; Pfam: PF03963; InterPro: IPR005648; hook assembly protein 949736 flgD 12365749 flgD Helicobacter pylori 83 hook assembly protein YP_005785524.1 948777 D 585538 CDS YP_005785525.1 385225600 12365750 949733..951550 1 NC_017375.1 COG: COG1749; Pfam: PF00460,PF07559,PF06429; InterPro: IPR011491; flagellar hook 951550 flgE2 12365750 flgE2 Helicobacter pylori 83 flagellar hook YP_005785525.1 949733 D 585538 CDS YP_005785526.1 385225601 12365751 951602..952225 1 NC_017375.1 restriction endonuclease 952225 12365751 HMPREF0462_0960 Helicobacter pylori 83 restriction endonuclease YP_005785526.1 951602 D 585538 CDS YP_005785527.1 385225602 12365752 952194..953354 1 NC_017375.1 COG: COG0827; Pfam: PF07669; adenine specific DNA methyltransferase 953354 hinDIIM 12365752 hinDIIM Helicobacter pylori 83 adenine specific DNA methyltransferase YP_005785527.1 952194 D 585538 CDS YP_005785528.1 385225603 12365753 953348..955378 1 NC_017375.1 COG: COG0210; Pfam: PF00580; InterPro: IPR000212; rep helicase, single-stranded DNA-dependent ATPase 955378 12365753 HMPREF0462_0962 Helicobacter pylori 83 rep helicase, single-stranded DNA-dependent ATPase YP_005785528.1 953348 D 585538 CDS YP_005785529.1 385225604 12365754 complement(955846..956001) 1 NC_017375.1 hypothetical protein 956001 12365754 HMPREF0462_0963 Helicobacter pylori 83 hypothetical protein YP_005785529.1 955846 R 585538 CDS YP_005785530.1 385225605 12365755 956189..957742 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 957742 12365755 HMPREF0462_0964 Helicobacter pylori 83 outer membrane protein YP_005785530.1 956189 D 585538 CDS YP_005785531.1 385225606 12365756 957764..959353 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 959353 12365756 HMPREF0462_0965 Helicobacter pylori 83 outer membrane protein YP_005785531.1 957764 D 585538 CDS YP_005785532.1 385225607 12365757 complement(959622..959804) 1 NC_017375.1 SsrA-binding protein 959804 12365757 HMPREF0462_0966 Helicobacter pylori 83 SsrA-binding protein YP_005785532.1 959622 R 585538 CDS YP_005785533.1 385225608 12365758 complement(959886..961430) 1 NC_017375.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 961430 hofG 12365758 hofG Helicobacter pylori 83 hof-family outer membrane protein YP_005785533.1 959886 R 585538 CDS YP_005785534.1 385225609 12365759 complement(961677..964118) 1 NC_017375.1 COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR000531; iron-regulated outer membrane protein 964118 frpB2 12365759 frpB2 Helicobacter pylori 83 iron-regulated outer membrane protein YP_005785534.1 961677 R 585538 CDS YP_005785535.1 385225610 12365760 complement(964295..964726) 1 NC_017375.1 hypothetical protein 964726 12365760 HMPREF0462_0969 Helicobacter pylori 83 hypothetical protein YP_005785535.1 964295 R 585538 CDS YP_005785536.1 385225611 12365761 complement(964726..967983) 1 NC_017375.1 COG: COG0458; Pfam: PF00289,PF02786,PF02787,PF02142; InterPro: IPR006275; carbamoyl-phosphate synthase large subunit 967983 carB 12365761 carB Helicobacter pylori 83 carbamoyl-phosphate synthase large subunit YP_005785536.1 964726 R 585538 CDS YP_005785537.1 385225612 12365762 complement(968079..968771) 1 NC_017375.1 COG: COG0670; Pfam: PF01027; InterPro: IPR006214; TEGT family testis enhanced gene transfer transporter 968771 12365762 HMPREF0462_0971 Helicobacter pylori 83 TEGT family testis enhanced gene transfer transporter YP_005785537.1 968079 R 585538 CDS YP_005785538.1 385225613 12365763 968907..969911 1 NC_017375.1 COG: COG0057; Pfam: PF00044,PF02800; InterPro: IPR000173; glyceraldehyde-3-phosphate dehydrogenase 969911 gap2 12365763 gap2 Helicobacter pylori 83 glyceraldehyde-3-phosphate dehydrogenase YP_005785538.1 968907 D 585538 CDS YP_005785539.1 385225614 12365764 969990..977180 1 NC_017375.1 COG: COG5651; Pfam: PF03077,PF02691,PF03797; InterPro: IPR005546; vacuolating cytotoxin (VacA) family protein 977180 12365764 HMPREF0462_0973 Helicobacter pylori 83 vacuolating cytotoxin (VacA) family protein YP_005785539.1 969990 D 585538 CDS YP_005785540.1 385225615 12365765 977232..978023 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 978023 12365765 HMPREF0462_0974 Helicobacter pylori 83 outer membrane protein YP_005785540.1 977232 D 585538 CDS YP_005785541.1 385225616 12365766 977998..978339 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 978339 12365766 HMPREF0462_0975 Helicobacter pylori 83 outer membrane protein YP_005785541.1 977998 D 585538 CDS YP_005785542.1 385225617 12365767 complement(978397..978603) 1 NC_017375.1 COG: COG1942; Pfam: PF01361; InterPro: IPR004370; 4-oxalocrotonate tautomerase 978603 12365767 HMPREF0462_0976 Helicobacter pylori 83 4-oxalocrotonate tautomerase YP_005785542.1 978397 R 585538 CDS YP_005785543.1 385225618 12365768 978749..979330 1 NC_017375.1 COG: COG0353; Pfam: PF02132; InterPro: IPR000093; recombination protein R 979330 recR 12365768 recR Helicobacter pylori 83 recombination protein R YP_005785543.1 978749 D 585538 CDS YP_005785544.1 385225619 12365769 979327..980472 1 NC_017375.1 COG: COG0585; Pfam: PF01142; InterPro: IPR001656; tRNA pseudouridine synthase D 980472 truD 12365769 truD Helicobacter pylori 83 tRNA pseudouridine synthase D YP_005785544.1 979327 D 585538 CDS YP_005785545.1 385225620 12365770 980441..981391 1 NC_017375.1 COG: COG0501; Pfam: PF01435; InterPro: IPR001915; heat shock protein HtpX 981391 htpX 12365770 htpX Helicobacter pylori 83 heat shock protein HtpX YP_005785545.1 980441 D 585538 CDS YP_005785546.1 385225621 12365771 981392..981934 1 NC_017375.1 COG: COG0302; Pfam: PF01227; InterPro: IPR001474; GTP cyclohydrolase I 981934 folE 12365771 folE Helicobacter pylori 83 GTP cyclohydrolase I YP_005785546.1 981392 D 585538 CDS YP_005785547.1 385225622 12365772 981950..982861 1 NC_017375.1 COG: COG0142; Pfam: PF00348; InterPro: IPR008949; geranyltranstransferase 982861 ispA 12365772 ispA Helicobacter pylori 83 geranyltranstransferase YP_005785547.1 981950 D 585538 CDS YP_005785548.1 385225623 12365773 982858..983661 1 NC_017375.1 COG: COG0496; Pfam: PF01975; InterPro: IPR002828; 5'/3'-nucleotidase SurE 983661 surE 12365773 surE Helicobacter pylori 83 5'/3'-nucleotidase SurE YP_005785548.1 982858 D 585538 CDS YP_005785549.1 385225624 12365774 983658..984317 1 NC_017375.1 hypothetical protein 984317 12365774 HMPREF0462_0983 Helicobacter pylori 83 hypothetical protein YP_005785549.1 983658 D 585538 CDS YP_005785550.1 385225625 12365775 984321..984923 1 NC_017375.1 COG: COG0720; 6-pyruvoyl-tetrahydropterin synthase 984923 ptpS 12365775 ptpS Helicobacter pylori 83 6-pyruvoyl-tetrahydropterin synthase YP_005785550.1 984321 D 585538 CDS YP_005785551.1 385225626 12365776 984920..985675 1 NC_017375.1 COG: COG0602; Pfam: PF04055; radical SAM domain-containing protein 985675 12365776 HMPREF0462_0985 Helicobacter pylori 83 radical SAM domain-containing protein YP_005785551.1 984920 D 585538 CDS YP_005785552.1 385225627 12365777 985686..986171 1 NC_017375.1 COG: COG0454; Pfam: PF00583; InterPro: IPR016181; GNAT family acetyltransferase 986171 12365777 HMPREF0462_0986 Helicobacter pylori 83 GNAT family acetyltransferase YP_005785552.1 985686 D 585538 CDS YP_005785553.1 385225628 12365778 986390..988375 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 988375 12365778 HMPREF0462_0987 Helicobacter pylori 83 outer membrane protein YP_005785553.1 986390 D 585538 CDS YP_005785554.1 385225629 12365779 complement(988513..989682) 1 NC_017375.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; proline/betaine transporter 989682 proP 12365779 proP Helicobacter pylori 83 proline/betaine transporter YP_005785554.1 988513 R 585538 CDS YP_005785555.1 385225630 12365780 complement(990156..991484) 1 NC_017375.1 COG: COG1479; Pfam: PF03235; InterPro: IPR004919; hypothetical protein 991484 12365780 HMPREF0462_0989 Helicobacter pylori 83 hypothetical protein YP_005785555.1 990156 R 585538 CDS YP_005785556.1 385225631 12365781 complement(991462..991851) 1 NC_017375.1 COG: COG1479; Pfam: PF03235; hypothetical protein 991851 12365781 HMPREF0462_0990 Helicobacter pylori 83 hypothetical protein YP_005785556.1 991462 R 585538 CDS YP_005785557.1 385225632 12365782 complement(991906..992619) 1 NC_017375.1 COG: COG0765; Pfam: PF00528; InterPro: IPR000515; L-cystine ABC superfamily ATP binding cassette transporter, membrane protein 992619 tcyB 12365782 tcyB Helicobacter pylori 83 L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YP_005785557.1 991906 R 585538 CDS YP_005785558.1 385225633 12365783 complement(992603..993379) 1 NC_017375.1 COG: COG0834; Pfam: PF00497; InterPro: IPR001638; L-cystine ABC superfamily ATP binding cassette transporter, binding protein 993379 tcyA 12365783 tcyA Helicobacter pylori 83 L-cystine ABC superfamily ATP binding cassette transporter, binding protein YP_005785558.1 992603 R 585538 CDS YP_005785559.1 385225634 12365784 complement(993451..994584) 1 NC_017375.1 COG: COG0787; Pfam: PF01168,PF00842; InterPro: IPR000821; alanine racemase 994584 alr 12365784 alr Helicobacter pylori 83 alanine racemase YP_005785559.1 993451 R 585538 CDS YP_005785560.1 385225635 12365785 complement(994591..995943) 1 NC_017375.1 COG: COG1115; Pfam: PF01235; InterPro: IPR001463; AGCS family alanine/glycine:sodium (Na+) symporter 995943 agcS 12365785 agcS Helicobacter pylori 83 AGCS family alanine/glycine:sodium (Na+) symporter YP_005785560.1 994591 R 585538 CDS YP_005785561.1 385225636 12365786 complement(995984..997216) 1 NC_017375.1 COG: COG0665; Pfam: PF01266; InterPro: IPR006076; D-amino-acid dehydrogenase 997216 dadA 12365786 dadA Helicobacter pylori 83 D-amino-acid dehydrogenase YP_005785561.1 995984 R 585538 CDS YP_005785562.1 385225637 12365787 complement(997238..997615) 1 NC_017375.1 COG: COG0251; Pfam: PF01042; InterPro: IPR013813; endoribonuclease L-PSP 997615 12365787 HMPREF0462_0996 Helicobacter pylori 83 endoribonuclease L-PSP YP_005785562.1 997238 R 585538 CDS YP_005785563.1 385225638 12365789 998040..998339 1 NC_017375.1 Trl family protein 998339 12365789 HMPREF0462_0997 Helicobacter pylori 83 Trl family protein YP_005785563.1 998040 D 585538 CDS YP_005785564.1 385225639 12365793 998898..1000388 1 NC_017375.1 COG: COG1757; Pfam: PF03553; InterPro: IPR004770; NhaC family sodium:proton (Na+:H+) antiporter 1000388 12365793 HMPREF0462_0998 Helicobacter pylori 83 NhaC family sodium:proton (Na+:H+) antiporter YP_005785564.1 998898 D 585538 CDS YP_005785565.1 385225640 12365794 1000705..1001064 1 NC_017375.1 hypothetical protein 1001064 12365794 HMPREF0462_0999 Helicobacter pylori 83 hypothetical protein YP_005785565.1 1000705 D 585538 CDS YP_005785566.1 385225641 12365795 1001191..1001313 1 NC_017375.1 hypothetical protein 1001313 12365795 HMPREF0462_1000 Helicobacter pylori 83 hypothetical protein YP_005785566.1 1001191 D 585538 CDS YP_005785567.1 385225642 12365796 1001353..1001499 1 NC_017375.1 branched-chain amino acid aminotransferase I 1001499 ilvE 12365796 ilvE Helicobacter pylori 83 branched-chain amino acid aminotransferase I YP_005785567.1 1001353 D 585538 CDS YP_005785568.1 385225643 12365797 complement(1001625..1002638) 1 NC_017375.1 hypothetical protein 1002638 12365797 HMPREF0462_1002 Helicobacter pylori 83 hypothetical protein YP_005785568.1 1001625 R 585538 CDS YP_005785569.1 385225644 12365798 complement(1002648..1003100) 1 NC_017375.1 COG: COG1576; Pfam: PF02590; InterPro: IPR003742; SPOUT methyltransferase superfamily protein 1003100 12365798 HMPREF0462_1003 Helicobacter pylori 83 SPOUT methyltransferase superfamily protein YP_005785569.1 1002648 R 585538 CDS YP_005785570.1 385225645 12365799 complement(1003114..1003983) 1 NC_017375.1 COG: COG0777; Pfam: PF01039; InterPro: IPR000438; acetyl-coA carboxylase carboxyl transferase subunit beta 1003983 accD 12365799 accD Helicobacter pylori 83 acetyl-coA carboxylase carboxyl transferase subunit beta YP_005785570.1 1003114 R 585538 CDS YP_005785571.1 385225646 12365800 1004064..1004678 1 NC_017375.1 hypothetical protein 1004678 12365800 HMPREF0462_1005 Helicobacter pylori 83 hypothetical protein YP_005785571.1 1004064 D 585538 CDS YP_005785572.1 385225647 12365801 1004688..1005344 1 NC_017375.1 COG: COG1546; Pfam: PF02464; InterPro: IPR008136; hypothetical protein 1005344 12365801 HMPREF0462_1006 Helicobacter pylori 83 hypothetical protein YP_005785572.1 1004688 D 585538 CDS YP_005785573.1 385225648 12365802 complement(1005346..1005912) 1 NC_017375.1 hypothetical protein 1005912 12365802 HMPREF0462_1007 Helicobacter pylori 83 hypothetical protein YP_005785573.1 1005346 R 585538 CDS YP_005785574.1 385225649 12365803 complement(1005977..1006609) 1 NC_017375.1 Pfam: PF00881; InterPro: IPR000415; oxygen-insensitive NADPH nitroreductase 1006609 12365803 HMPREF0462_1008 Helicobacter pylori 83 oxygen-insensitive NADPH nitroreductase YP_005785574.1 1005977 R 585538 CDS YP_005785575.1 385225650 12365804 complement(1006606..1007460) 1 NC_017375.1 COG: COG0682; Pfam: PF01790; InterPro: IPR001640; prolipoprotein diacylglyceryl transferase 1007460 lgt 12365804 lgt Helicobacter pylori 83 prolipoprotein diacylglyceryl transferase YP_005785575.1 1006606 R 585538 CDS YP_005785576.1 385225651 12365805 complement(1007470..1008198) 1 NC_017375.1 COG: COG0564; Pfam: PF00849; InterPro: IPR006145; RNA pseudouridine synthase 1008198 rluA 12365805 rluA Helicobacter pylori 83 RNA pseudouridine synthase YP_005785576.1 1007470 R 585538 CDS YP_005785577.1 385225652 12365806 complement(1008207..1009394) 1 NC_017375.1 COG: COG1519; Pfam: PF04413; InterPro: IPR007507; 3-deoxy-D-manno-octulosonic-acid transferase 1009394 kdtA 12365806 kdtA Helicobacter pylori 83 3-deoxy-D-manno-octulosonic-acid transferase YP_005785577.1 1008207 R 585538 CDS YP_005785578.1 385225653 12365807 complement(1009395..1010159) 1 NC_017375.1 COG: COG1579; Pfam: PF02591; InterPro: IPR003743; hypothetical protein 1010159 12365807 HMPREF0462_1012 Helicobacter pylori 83 hypothetical protein YP_005785578.1 1009395 R 585538 CDS YP_005785579.1 385225654 12365808 complement(1010169..1010900) 1 NC_017375.1 COG: COG0327; Pfam: PF01784; InterPro: IPR002678; hypothetical protein 1010900 12365808 HMPREF0462_1013 Helicobacter pylori 83 hypothetical protein YP_005785579.1 1010169 R 585538 CDS YP_005785580.1 385225655 12365809 complement(1010902..1011798) 1 NC_017375.1 COG: COG0752; Pfam: PF02091; InterPro: IPR002310; glycyl-tRNA synthetase subunit alpha 1011798 glyQ 12365809 glyQ Helicobacter pylori 83 glycyl-tRNA synthetase subunit alpha YP_005785580.1 1010902 R 585538 CDS YP_005785581.1 385225656 12365810 complement(1011813..1012787) 1 NC_017375.1 COG: COG0240; Pfam: PF01210,PF07479; InterPro: IPR006168; glycerol-3-phosphate dehydrogenase 1012787 gpsA 12365810 gpsA Helicobacter pylori 83 glycerol-3-phosphate dehydrogenase YP_005785581.1 1011813 R 585538 CDS YP_005785582.1 385225657 12365811 complement(1013515..1013730) 1 NC_017375.1 hypothetical protein 1013730 12365811 HMPREF0462_1016 Helicobacter pylori 83 hypothetical protein YP_005785582.1 1013515 R 585538 CDS YP_005785583.1 385225658 12365812 complement(1013764..1013937) 1 NC_017375.1 hypothetical protein 1013937 12365812 HMPREF0462_1017 Helicobacter pylori 83 hypothetical protein YP_005785583.1 1013764 R 585538 CDS YP_005785584.1 385225659 12365813 complement(1014124..1014918) 1 NC_017375.1 hypothetical protein 1014918 12365813 HMPREF0462_1018 Helicobacter pylori 83 hypothetical protein YP_005785584.1 1014124 R 585538 CDS YP_005785585.1 385225660 12365814 complement(1014911..1015741) 1 NC_017375.1 COG: COG0699; hypothetical protein 1015741 12365814 HMPREF0462_1019 Helicobacter pylori 83 hypothetical protein YP_005785585.1 1014911 R 585538 CDS YP_005785586.1 385225661 12365815 complement(1015860..1015991) 1 NC_017375.1 hypothetical protein 1015991 12365815 HMPREF0462_1020 Helicobacter pylori 83 hypothetical protein YP_005785586.1 1015860 R 585538 CDS YP_005785587.1 385225662 12365816 1016008..1016151 1 NC_017375.1 hypothetical protein 1016151 12365816 HMPREF0462_1021 Helicobacter pylori 83 hypothetical protein YP_005785587.1 1016008 D 585538 CDS YP_005785588.1 385225663 12365817 complement(1016341..1016628) 1 NC_017375.1 COG: COG3309; Pfam: PF04605; InterPro: IPR007683; virulence-associated protein 2 1016628 vapD 12365817 vapD Helicobacter pylori 83 virulence-associated protein 2 YP_005785588.1 1016341 R 585538 CDS YP_005785589.1 385225664 12365818 complement(1016698..1016979) 1 NC_017375.1 hypothetical protein 1016979 12365818 HMPREF0462_1023 Helicobacter pylori 83 hypothetical protein YP_005785589.1 1016698 R 585538 CDS YP_005785590.1 385225665 12365819 complement(1016990..1020049) 1 NC_017375.1 COG: COG3696; Pfam: PF00873; InterPro: IPR004763; CzcA family heavy metal efflux pump 1020049 czcA 12365819 czcA Helicobacter pylori 83 CzcA family heavy metal efflux pump YP_005785590.1 1016990 R 585538 CDS YP_005785591.1 385225666 12365820 complement(1020049..1021104) 1 NC_017375.1 COG: COG0845; nickel-cobalt-cadmium resistance protein 1021104 nccB 12365820 nccB Helicobacter pylori 83 nickel-cobalt-cadmium resistance protein YP_005785591.1 1020049 R 585538 CDS YP_005785592.1 385225667 12365821 complement(1021125..1022444) 1 NC_017375.1 Pfam: PF02321; InterPro: IPR003423; nickel cobalt outer membrane efflux protein 1022444 12365821 HMPREF0462_1026 Helicobacter pylori 83 nickel cobalt outer membrane efflux protein YP_005785592.1 1021125 R 585538 CDS YP_005785593.1 385225668 12365822 complement(1022416..1024518) 1 NC_017375.1 COG: COG0751; Pfam: PF02092; InterPro: IPR015944; glycyl-tRNA synthetase subunit beta 1024518 glyS 12365822 glyS Helicobacter pylori 83 glycyl-tRNA synthetase subunit beta YP_005785593.1 1022416 R 585538 CDS YP_005785594.1 385225669 12365823 1024631..1025698 1 NC_017375.1 hypothetical protein 1025698 12365823 HMPREF0462_1028 Helicobacter pylori 83 hypothetical protein YP_005785594.1 1024631 D 585538 CDS YP_005785595.1 385225670 12365824 1025711..1027186 1 NC_017375.1 COG: COG0696; Pfam: PF06415,PF01676; InterPro: IPR005995; phosphoglycerate mutase 1027186 gpmI 12365824 gpmI Helicobacter pylori 83 phosphoglycerate mutase YP_005785595.1 1025711 D 585538 CDS YP_005785596.1 385225671 12365825 1027201..1027482 1 NC_017375.1 COG: COG0721; Pfam: PF02686; InterPro: IPR003837; glutamyl-tRNA(Gln) amidotransferase subunit C 1027482 gatC 12365825 gatC Helicobacter pylori 83 glutamyl-tRNA(Gln) amidotransferase subunit C YP_005785596.1 1027201 D 585538 CDS YP_005785597.1 385225672 12365826 complement(1027555..1028865) 1 NC_017375.1 COG: COG0161; Pfam: PF00202; InterPro: IPR005815; adenosylmethionine-8-amino-7-oxononanoate transaminase 1028865 bioA 12365826 bioA Helicobacter pylori 83 adenosylmethionine-8-amino-7-oxononanoate transaminase YP_005785597.1 1027555 R 585538 CDS YP_005785598.1 385225673 12365827 1028994..1030457 1 NC_017375.1 COG: COG0760; peptidyl-prolyl cis-trans isomerase 1030457 12365827 HMPREF0462_1032 Helicobacter pylori 83 peptidyl-prolyl cis-trans isomerase YP_005785598.1 1028994 D 585538 CDS YP_005785599.1 385225674 12365828 1030457..1031953 1 NC_017375.1 COG: COG0849; Pfam: PF02491; InterPro: IPR003494; cell division protein FtsA 1031953 ftsA 12365828 ftsA Helicobacter pylori 83 cell division protein FtsA YP_005785599.1 1030457 D 585538 CDS YP_005785600.1 385225675 12365829 1032088..1033245 1 NC_017375.1 COG: COG0206; Pfam: PF00091,PF03953; InterPro: IPR000158; cell division protein FtsZ 1033245 ftsZ 12365829 ftsZ Helicobacter pylori 83 cell division protein FtsZ YP_005785600.1 1032088 D 585538 CDS YP_005785601.1 385225676 12365830 complement(1034126..1034950) 1 NC_017375.1 COG: COG0668; Pfam: PF00924; InterPro: IPR006685; MscS family small conductance mechanosenstive ion channel 1034950 12365830 HMPREF0462_1035 Helicobacter pylori 83 MscS family small conductance mechanosenstive ion channel YP_005785601.1 1034126 R 585538 CDS YP_005785602.1 385225677 12365831 complement(1034943..1035143) 1 NC_017375.1 hypothetical protein 1035143 12365831 HMPREF0462_1036 Helicobacter pylori 83 hypothetical protein YP_005785602.1 1034943 R 585538 CDS YP_005785603.1 385225678 12365832 complement(1035167..1035316) 1 NC_017375.1 hypothetical protein 1035316 12365832 HMPREF0462_1037 Helicobacter pylori 83 hypothetical protein YP_005785603.1 1035167 R 585538 CDS YP_005785604.1 385225679 12365836 complement(1038815..1038979) 1 NC_017375.1 hypothetical protein 1038979 12365836 HMPREF0462_1038 Helicobacter pylori 83 hypothetical protein YP_005785604.1 1038815 R 585538 CDS YP_005785605.1 385225680 12365837 1039643..1041340 1 NC_017375.1 Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein 1041340 12365837 HMPREF0462_1039 Helicobacter pylori 83 hypothetical protein YP_005785605.1 1039643 D 585538 CDS YP_005785606.1 385225681 12365838 1041381..1041770 1 NC_017375.1 COG: COG0608; Pfam: PF01368; hypothetical protein 1041770 12365838 HMPREF0462_1040 Helicobacter pylori 83 hypothetical protein YP_005785606.1 1041381 D 585538 CDS YP_005785607.1 385225682 12365839 1041822..1042031 1 NC_017375.1 COG: COG0608; hypothetical protein 1042031 12365839 HMPREF0462_1041 Helicobacter pylori 83 hypothetical protein YP_005785607.1 1041822 D 585538 CDS YP_005785608.1 385225683 12365840 1042022..1042633 1 NC_017375.1 COG: COG0608; hypothetical protein 1042633 12365840 HMPREF0462_1042 Helicobacter pylori 83 hypothetical protein YP_005785608.1 1042022 D 585538 CDS YP_005785609.1 385225684 12365841 1042677..1043159 1 NC_017375.1 hypothetical protein 1043159 12365841 HMPREF0462_1043 Helicobacter pylori 83 hypothetical protein YP_005785609.1 1042677 D 585538 CDS YP_005785610.1 385225685 12365842 1043555..1043914 1 NC_017375.1 hypothetical protein 1043914 12365842 HMPREF0462_1044 Helicobacter pylori 83 hypothetical protein YP_005785610.1 1043555 D 585538 CDS YP_005785611.1 385225686 12365843 1044006..1044530 1 NC_017375.1 hypothetical protein 1044530 12365843 HMPREF0462_1045 Helicobacter pylori 83 hypothetical protein YP_005785611.1 1044006 D 585538 CDS YP_005785612.1 385225687 12365844 1044635..1045555 1 NC_017375.1 hypothetical protein 1045555 12365844 HMPREF0462_1046 Helicobacter pylori 83 hypothetical protein YP_005785612.1 1044635 D 585538 CDS YP_005785613.1 385225688 12365845 complement(1045681..1047528) 1 NC_017375.1 COG: COG1166; Pfam: PF02784,PF00278; InterPro: IPR002985; arginine 2-monooxygenase 1047528 speA 12365845 speA Helicobacter pylori 83 arginine 2-monooxygenase YP_005785613.1 1045681 R 585538 CDS YP_005785614.1 385225689 12365846 complement(1047543..1048712) 1 NC_017375.1 COG: COG0438; Pfam: PF00534; InterPro: IPR001296; type 1 capsular polysaccharide biosynthesis protein J 1048712 capJ 12365846 capJ Helicobacter pylori 83 type 1 capsular polysaccharide biosynthesis protein J YP_005785614.1 1047543 R 585538 CDS YP_005785615.1 385225690 12365847 complement(1048717..1049145) 1 NC_017375.1 COG: COG2050; Pfam: PF03061; InterPro: IPR006683; hypothetical protein 1049145 12365847 HMPREF0462_1049 Helicobacter pylori 83 hypothetical protein YP_005785615.1 1048717 R 585538 CDS YP_005785616.1 385225691 12365848 complement(1049162..1049947) 1 NC_017375.1 COG: COG0500; Pfam: PF08003; InterPro: IPR010017; S-adenosyl methionine-dependent methyltransferase 1049947 12365848 HMPREF0462_1050 Helicobacter pylori 83 S-adenosyl methionine-dependent methyltransferase YP_005785616.1 1049162 R 585538 CDS YP_005785617.1 385225692 12365849 complement(1049951..1050958) 1 NC_017375.1 hypothetical protein 1050958 12365849 HMPREF0462_1051 Helicobacter pylori 83 hypothetical protein YP_005785617.1 1049951 R 585538 CDS YP_005785618.1 385225693 12365850 complement(1050959..1052911) 1 NC_017375.1 COG: COG0143; Pfam: PF09334,PF01588; InterPro: IPR002304; methionine--tRNA ligase 1052911 metG 12365850 metG Helicobacter pylori 83 methionine--tRNA ligase YP_005785618.1 1050959 R 585538 CDS YP_005785619.1 385225694 12365851 1053080..1054249 1 NC_017375.1 COG: COG2230; Pfam: PF02353; InterPro: IPR003333; cyclopropane-fatty-acyl-phospholipid synthase 1054249 cfa 12365851 cfa Helicobacter pylori 83 cyclopropane-fatty-acyl-phospholipid synthase YP_005785619.1 1053080 D 585538 CDS YP_005785620.1 385225695 12365852 complement(1054252..1056135) 1 NC_017375.1 COG: COG0668; Pfam: PF00924; InterPro: IPR006685; hypothetical protein 1056135 12365852 HMPREF0462_1054 Helicobacter pylori 83 hypothetical protein YP_005785620.1 1054252 R 585538 CDS YP_005785621.1 385225696 12365857 complement(1057310..1058059) 1 NC_017375.1 Pfam: PF05211; InterPro: IPR007876; neuraminyllactose-binding hemagglutinin family protein 1058059 12365857 HMPREF0462_1055 Helicobacter pylori 83 neuraminyllactose-binding hemagglutinin family protein YP_005785621.1 1057310 R 585538 CDS YP_005785622.1 385225697 12365858 complement(1058138..1059664) 1 NC_017375.1 COG: COG0519; Pfam: PF00117,PF03054,PF00958; InterPro: IPR001674; GMP synthase 1059664 guaA 12365858 guaA Helicobacter pylori 83 GMP synthase YP_005785622.1 1058138 R 585538 CDS YP_005785623.1 385225698 12365859 complement(1059675..1060163) 1 NC_017375.1 hypothetical protein 1060163 12365859 HMPREF0462_1057 Helicobacter pylori 83 hypothetical protein YP_005785623.1 1059675 R 585538 CDS YP_005785624.1 385225699 12365860 complement(1060324..1062099) 1 NC_017375.1 COG: COG0243; Pfam: PF00384,PF01568; InterPro: IPR006656; trimethylamine-N-oxide reductase 1062099 torA 12365860 torA Helicobacter pylori 83 trimethylamine-N-oxide reductase YP_005785624.1 1060324 R 585538 CDS YP_005785625.1 385225700 12365861 complement(1062179..1062385) 1 NC_017375.1 biotin sulfoxide reductase 1062385 bisC 12365861 bisC Helicobacter pylori 83 biotin sulfoxide reductase YP_005785625.1 1062179 R 585538 CDS YP_005785626.1 385225701 12365862 complement(1062382..1062513) 1 NC_017375.1 biotin sulfoxide reductase 1062513 bisC2 12365862 bisC2 Helicobacter pylori 83 biotin sulfoxide reductase YP_005785626.1 1062382 R 585538 CDS YP_005785627.1 385225702 12365863 complement(1062510..1062707) 1 NC_017375.1 biotin sulfoxide reductase 1062707 bisC3 12365863 bisC3 Helicobacter pylori 83 biotin sulfoxide reductase YP_005785627.1 1062510 R 585538 CDS YP_005785628.1 385225703 12365864 complement(1062813..1063403) 1 NC_017375.1 hypothetical protein 1063403 12365864 HMPREF0462_1062 Helicobacter pylori 83 hypothetical protein YP_005785628.1 1062813 R 585538 CDS YP_005785629.1 385225704 12365865 complement(1063429..1064751) 1 NC_017375.1 COG: COG0520; Pfam: PF00266; InterPro: IPR000192; aminotransferase 1064751 12365865 HMPREF0462_1063 Helicobacter pylori 83 aminotransferase YP_005785629.1 1063429 R 585538 CDS YP_005785630.1 385225705 12365866 complement(1064770..1065084) 1 NC_017375.1 COG: COG0537; Pfam: PF01230; InterPro: IPR011151; HIT family protein 1065084 12365866 HMPREF0462_1064 Helicobacter pylori 83 HIT family protein YP_005785630.1 1064770 R 585538 CDS YP_005785631.1 385225706 12365867 1065166..1066152 1 NC_017375.1 COG: COG0016; Pfam: PF02912,PF01409; InterPro: IPR004529; phenylalanyl-tRNA synthetase subunit alpha 1066152 pheS 12365867 pheS Helicobacter pylori 83 phenylalanyl-tRNA synthetase subunit alpha YP_005785631.1 1065166 D 585538 CDS YP_005785632.1 385225707 12365868 1066152..1068446 1 NC_017375.1 COG: COG0072; Pfam: PF01588,PF03484,PF03147; InterPro: IPR004532; phenylalanyl-tRNA synthetase subunit beta 1068446 pheT 12365868 pheT Helicobacter pylori 83 phenylalanyl-tRNA synthetase subunit beta YP_005785632.1 1066152 D 585538 CDS YP_005785633.1 385225708 12365869 1068462..1069751 1 NC_017375.1 COG: COG0128; Pfam: PF00275; InterPro: IPR006264; 3-phosphoshikimate 1-carboxyvinyltransferase 1069751 aroA 12365869 aroA Helicobacter pylori 83 3-phosphoshikimate 1-carboxyvinyltransferase YP_005785633.1 1068462 D 585538 CDS YP_005785634.1 385225709 12365870 1069741..1070565 1 NC_017375.1 COG: COG0761; Pfam: PF02401; InterPro: IPR003451; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1070565 ispH 12365870 ispH Helicobacter pylori 83 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_005785634.1 1069741 D 585538 CDS YP_005785635.1 385225710 12365871 1070686..1072344 1 NC_017375.1 COG: COG0539; Pfam: PF00575; InterPro: IPR000110; 30S ribosomal protein S1 1072344 rpsA 12365871 rpsA Helicobacter pylori 83 30S ribosomal protein S1 YP_005785635.1 1070686 D 585538 CDS YP_005785636.1 385225711 12365872 1072373..1072912 1 NC_017375.1 hypothetical protein 1072912 12365872 HMPREF0462_1070 Helicobacter pylori 83 hypothetical protein YP_005785636.1 1072373 D 585538 CDS YP_005785637.1 385225712 12365873 1072928..1074502 1 NC_017375.1 COG: COG0111; Pfam: PF00389,PF02826,PF01842; InterPro: IPR006236; phosphoglycerate dehydrogenase 1074502 serA 12365873 serA Helicobacter pylori 83 phosphoglycerate dehydrogenase YP_005785637.1 1072928 D 585538 CDS YP_005785638.1 385225713 12365874 1074512..1076362 1 NC_017375.1 COG: COG0043; Pfam: PF01977; InterPro: IPR002830; SCO4490 family menaquinone biosynthesis decarboxylase 1076362 12365874 HMPREF0462_1072 Helicobacter pylori 83 SCO4490 family menaquinone biosynthesis decarboxylase YP_005785638.1 1074512 D 585538 CDS YP_005785639.1 385225714 12365875 1076372..1077040 1 NC_017375.1 COG: COG0325; Pfam: PF01168; InterPro: IPR011078; YggS family pyridoxal phosphate enzyme 1077040 12365875 HMPREF0462_1073 Helicobacter pylori 83 YggS family pyridoxal phosphate enzyme YP_005785639.1 1076372 D 585538 CDS YP_005785640.1 385225715 12365876 1077042..1077800 1 NC_017375.1 COG: COG2908; Pfam: PF00149; Ser/Thr protein phosphatase 1077800 12365876 HMPREF0462_1074 Helicobacter pylori 83 Ser/Thr protein phosphatase YP_005785640.1 1077042 D 585538 CDS YP_005785641.1 385225716 12365877 1077804..1078739 1 NC_017375.1 COG: COG0835; Pfam: PF01584,PF00072; InterPro: IPR002545; chemotaxis protein CheV 1078739 cheV3 12365877 cheV3 Helicobacter pylori 83 chemotaxis protein CheV YP_005785641.1 1077804 D 585538 CDS YP_005785642.1 385225717 12365878 1078797..1081208 1 NC_017375.1 COG: COG0643; Pfam: PF01627,PF02895,PF02518,PF01584,PF00072; InterPro: IPR003594; chemotaxis histidine kinase CheA 1081208 cheA 12365878 cheA Helicobacter pylori 83 chemotaxis histidine kinase CheA YP_005785642.1 1078797 D 585538 CDS YP_005785643.1 385225718 12365879 1081205..1081702 1 NC_017375.1 COG: COG0835; Pfam: PF01584; InterPro: IPR002545; chemotaxis signal transduction protein CheW 1081702 cheW 12365879 cheW Helicobacter pylori 83 chemotaxis signal transduction protein CheW YP_005785643.1 1081205 D 585538 CDS YP_005785644.1 385225719 12365880 complement(1081959..1082459) 1 NC_017375.1 COG: COG2077; Pfam: PF08534; InterPro: IPR012335; thiol peroxidase 1082459 tpx 12365880 tpx Helicobacter pylori 83 thiol peroxidase YP_005785644.1 1081959 R 585538 CDS YP_005785645.1 385225720 12365881 1082683..1083324 1 NC_017375.1 COG: COG0605; Pfam: PF00081,PF02777; InterPro: IPR001189; superoxide dismutase 1083324 sodB 12365881 sodB Helicobacter pylori 83 superoxide dismutase YP_005785645.1 1082683 D 585538 CDS YP_005785646.1 385225721 12365882 1083376..1084095 1 NC_017375.1 COG: COG0500; Pfam: PF08241; InterPro: IPR005271; S-adenosyl-L-methionine-dependent methyltransferase 1084095 12365882 HMPREF0462_1080 Helicobacter pylori 83 S-adenosyl-L-methionine-dependent methyltransferase YP_005785646.1 1083376 D 585538 CDS YP_005785647.1 385225722 12365883 complement(1084129..1085988) 1 NC_017375.1 COG: COG1198; Pfam: PF00270,PF00271; InterPro: IPR005259; DNA replication factor Y 1085988 priA 12365883 priA Helicobacter pylori 83 DNA replication factor Y YP_005785647.1 1084129 R 585538 CDS YP_005785648.1 385225723 12365884 complement(1085973..1086209) 1 NC_017375.1 hypothetical protein 1086209 12365884 HMPREF0462_1082 Helicobacter pylori 83 hypothetical protein YP_005785648.1 1085973 R 585538 CDS YP_005785649.1 385225724 12365885 complement(1086222..1086449) 1 NC_017375.1 hypothetical protein 1086449 12365885 HMPREF0462_1083 Helicobacter pylori 83 hypothetical protein YP_005785649.1 1086222 R 585538 CDS YP_005785650.1 385225725 12365886 1086631..1087377 1 NC_017375.1 Pfam: PF05036; hypothetical protein 1087377 12365886 HMPREF0462_1084 Helicobacter pylori 83 hypothetical protein YP_005785650.1 1086631 D 585538 CDS YP_005785651.1 385225726 12365887 complement(1087386..1087913) 1 NC_017375.1 hypothetical protein 1087913 12365887 HMPREF0462_1085 Helicobacter pylori 83 hypothetical protein YP_005785651.1 1087386 R 585538 CDS YP_005785652.1 385225727 12365888 1088081..1089304 1 NC_017375.1 COG: COG0501; Pfam: PF01435; InterPro: IPR001915; zinc-metallo protease 1089304 yjr117W 12365888 yjr117W Helicobacter pylori 83 zinc-metallo protease YP_005785652.1 1088081 D 585538 CDS YP_005785653.1 385225728 12365889 1089301..1090131 1 NC_017375.1 COG: COG2890; Pfam: PF05175; InterPro: IPR004556; protoporphyrinogen oxidase 1090131 hemK 12365889 hemK Helicobacter pylori 83 protoporphyrinogen oxidase YP_005785653.1 1089301 D 585538 CDS YP_005785654.1 385225729 12365890 1090197..1091543 1 NC_017375.1 COG: COG0334; Pfam: PF02812,PF00208; InterPro: IPR006095; NADP-specific glutamate dehydrogenase 1091543 gdhA 12365890 gdhA Helicobacter pylori 83 NADP-specific glutamate dehydrogenase YP_005785654.1 1090197 D 585538 CDS YP_005785655.1 385225730 12365891 complement(1091562..1092935) 1 NC_017375.1 InterPro: IPR001503; alpha-1,3/4-fucosyltransferase 1092935 12365891 HMPREF0462_1089 Helicobacter pylori 83 alpha-1,3/4-fucosyltransferase YP_005785655.1 1091562 R 585538 CDS YP_005785656.1 385225731 12365892 complement(1092945..1095755) 1 NC_017375.1 COG: COG0755; Pfam: PF01578; InterPro: IPR002541; cytochrome c biogenesis protein 1095755 ycf 12365892 ycf Helicobacter pylori 83 cytochrome c biogenesis protein YP_005785656.1 1092945 R 585538 CDS YP_005785657.1 385225732 12365893 complement(1095764..1096435) 1 NC_017375.1 disulfide interchange protein 1096435 dsbC 12365893 dsbC Helicobacter pylori 83 disulfide interchange protein YP_005785657.1 1095764 R 585538 CDS YP_005785658.1 385225733 12365894 complement(1096509..1097516) 1 NC_017375.1 COG: COG0276; Pfam: PF00762; InterPro: IPR001015; ferrochelatase 1097516 hemH 12365894 hemH Helicobacter pylori 83 ferrochelatase YP_005785658.1 1096509 R 585538 CDS YP_005785659.1 385225734 12365895 1097572..1098003 1 NC_017375.1 TerC family integral membrane protein 1098003 12365895 HMPREF0462_1093 Helicobacter pylori 83 TerC family integral membrane protein YP_005785659.1 1097572 D 585538 CDS YP_005785660.1 385225735 12365896 1098004..1098684 1 NC_017375.1 COG: COG1385; Pfam: PF04452; InterPro: IPR006700; RsmE family RNA methyltransferase 1098684 12365896 HMPREF0462_1094 Helicobacter pylori 83 RsmE family RNA methyltransferase YP_005785660.1 1098004 D 585538 CDS YP_005785661.1 385225736 12365897 complement(1098708..1100936) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HomD 1100936 homD 12365897 homD Helicobacter pylori 83 outer membrane protein HomD YP_005785661.1 1098708 R 585538 CDS YP_005785662.1 385225737 12365898 complement(1101095..1101661) 1 NC_017375.1 COG: COG0717; Pfam: PF00692; InterPro: IPR011962; dCTP deaminase 1101661 dcd 12365898 dcd Helicobacter pylori 83 dCTP deaminase YP_005785662.1 1101095 R 585538 CDS YP_005785663.1 385225738 12365899 1101788..1102258 1 NC_017375.1 COG: COG0511; Pfam: PF00364; InterPro: IPR001249; acetyl-CoA carboxylase biotin carboxyl carrier subunit 1102258 accB 12365899 accB Helicobacter pylori 83 acetyl-CoA carboxylase biotin carboxyl carrier subunit YP_005785663.1 1101788 D 585538 CDS YP_005785664.1 385225739 12365900 1102264..1103631 1 NC_017375.1 COG: COG0439; Pfam: PF00289,PF02786,PF02785; InterPro: IPR004549; acetyl-CoA carboxylase subunit A 1103631 accC 12365900 accC Helicobacter pylori 83 acetyl-CoA carboxylase subunit A YP_005785664.1 1102264 D 585538 CDS YP_005785665.1 385225740 12365901 1103724..1104686 1 NC_017375.1 type II DNA modification enzyme (methyltransferase) 1104686 12365901 HMPREF0462_1099 Helicobacter pylori 83 type II DNA modification enzyme (methyltransferase) YP_005785665.1 1103724 D 585538 CDS YP_005785666.1 385225741 12365902 1104686..1105234 1 NC_017375.1 hypothetical protein 1105234 12365902 HMPREF0462_1100 Helicobacter pylori 83 hypothetical protein YP_005785666.1 1104686 D 585538 CDS YP_005785667.1 385225742 12365903 1105283..1105927 1 NC_017375.1 hypothetical protein 1105927 12365903 HMPREF0462_1101 Helicobacter pylori 83 hypothetical protein YP_005785667.1 1105283 D 585538 CDS YP_005785668.1 385225743 12365904 1105924..1107051 1 NC_017375.1 COG: COG0399; Pfam: PF01041; InterPro: IPR000653; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 1107051 pseC 12365904 pseC Helicobacter pylori 83 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase YP_005785668.1 1105924 D 585538 CDS YP_005785669.1 385225744 12365906 1107370..1108395 1 NC_017375.1 COG: COG0208; Pfam: PF00268; InterPro: IPR000358; ribonucleotide-diphosphate reductase subunit beta 1108395 nrdB 12365906 nrdB Helicobacter pylori 83 ribonucleotide-diphosphate reductase subunit beta YP_005785669.1 1107370 D 585538 CDS YP_005785670.1 385225745 12365907 1108405..1109034 1 NC_017375.1 COG: COG2518; Pfam: PF01135; InterPro: IPR000682; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1109034 pcm 12365907 pcm Helicobacter pylori 83 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_005785670.1 1108405 D 585538 CDS YP_005785671.1 385225746 12365908 1109045..1110082 1 NC_017375.1 COG: COG0795; Pfam: PF03739; InterPro: IPR005495; hypothetical protein 1110082 12365908 HMPREF0462_1105 Helicobacter pylori 83 hypothetical protein YP_005785671.1 1109045 D 585538 CDS YP_005785672.1 385225747 12365909 1110083..1110811 1 NC_017375.1 COG: COG0101; Pfam: PF01416; InterPro: IPR001406; tRNA pseudouridine synthase A 1110811 truA 12365909 truA Helicobacter pylori 83 tRNA pseudouridine synthase A YP_005785672.1 1110083 D 585538 CDS YP_005785673.1 385225748 12365910 complement(1110805..1111839) 1 NC_017375.1 COG: COG1087; Pfam: PF01370; InterPro: IPR005886; UDP-glucose 4-epimerase 1111839 galE 12365910 galE Helicobacter pylori 83 UDP-glucose 4-epimerase YP_005785673.1 1110805 R 585538 CDS YP_005785674.1 385225749 12365913 1112374..1113909 1 NC_017375.1 outer membrane protein 1113909 12365913 HMPREF0462_1108 Helicobacter pylori 83 outer membrane protein YP_005785674.1 1112374 D 585538 CDS YP_005785675.1 385225750 12365914 1113931..1114683 1 NC_017375.1 COG: COG4221; Pfam: PF00106; InterPro: IPR002198; NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG 1114683 ydfG 12365914 ydfG Helicobacter pylori 83 NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG YP_005785675.1 1113931 D 585538 CDS YP_005785676.1 385225751 12365915 complement(1114872..1115744) 1 NC_017375.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 1115744 hcpC 12365915 hcpC Helicobacter pylori 83 beta-lactamase YP_005785676.1 1114872 R 585538 CDS YP_005785677.1 385225752 12365916 complement(1115814..1116440) 1 NC_017375.1 COG: COG0800; Pfam: PF01081; InterPro: IPR013785; KHG/KDPG aldolase 1116440 eda 12365916 eda Helicobacter pylori 83 KHG/KDPG aldolase YP_005785677.1 1115814 R 585538 CDS YP_005785678.1 385225753 12365917 complement(1116459..1118402) 1 NC_017375.1 COG: COG0129; Pfam: PF00920; InterPro: IPR004786; phosphogluconate dehydratase 1118402 edd 12365917 edd Helicobacter pylori 83 phosphogluconate dehydratase YP_005785678.1 1116459 R 585538 CDS YP_005785679.1 385225754 12365918 1118353..1119630 1 NC_017375.1 COG: COG0364; Pfam: PF00479,PF02781; InterPro: IPR001282; glucose-6-phosphate dehydrogenase 1119630 zwf 12365918 zwf Helicobacter pylori 83 glucose-6-phosphate dehydrogenase YP_005785679.1 1118353 D 585538 CDS YP_005785680.1 385225755 12365919 1119641..1120324 1 NC_017375.1 COG: COG0363; InterPro: IPR005900; 6-phosphogluconolactonase 1120324 pgl 12365919 pgl Helicobacter pylori 83 6-phosphogluconolactonase YP_005785680.1 1119641 D 585538 CDS YP_005785681.1 385225756 12365920 1120311..1121321 1 NC_017375.1 COG: COG0837; Pfam: PF02685; InterPro: IPR003836; glucokinase 1121321 glk 12365920 glk Helicobacter pylori 83 glucokinase YP_005785681.1 1120311 D 585538 CDS YP_005785682.1 385225757 12365921 1121482..1122528 1 NC_017375.1 COG: COG1064; Pfam: PF08240,PF00107; InterPro: IPR002085; NADP-dependent alcohol dehydrogenase 1122528 adh 12365921 adh Helicobacter pylori 83 NADP-dependent alcohol dehydrogenase YP_005785682.1 1121482 D 585538 CDS YP_005785683.1 385225758 12365922 complement(1122540..1123700) 1 NC_017375.1 COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide biosynthesis protein 1123700 12365922 HMPREF0462_1117 Helicobacter pylori 83 lipopolysaccharide biosynthesis protein YP_005785683.1 1122540 R 585538 CDS YP_005785684.1 385225759 12365923 1123886..1125193 1 NC_017375.1 hypothetical protein 1125193 12365923 HMPREF0462_1118 Helicobacter pylori 83 hypothetical protein YP_005785684.1 1123886 D 585538 CDS YP_005785685.1 385225760 12365924 complement(1125200..1125901) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1125901 12365924 HMPREF0462_1119 Helicobacter pylori 83 outer membrane protein YP_005785685.1 1125200 R 585538 CDS YP_005785686.1 385225761 12365925 complement(1125965..1126087) 1 NC_017375.1 hypothetical protein 1126087 12365925 HMPREF0462_1120 Helicobacter pylori 83 hypothetical protein YP_005785686.1 1125965 R 585538 CDS YP_005785687.1 385225762 12365926 1126161..1126721 1 NC_017375.1 COG: COG1014; Pfam: PF01558; InterPro: IPR011894; pyruvate synthase subunit PorC 1126721 porG 12365926 porG Helicobacter pylori 83 pyruvate synthase subunit PorC YP_005785687.1 1126161 D 585538 CDS YP_005785688.1 385225763 12365927 1126737..1127129 1 NC_017375.1 COG: COG1144; Pfam: PF00037; InterPro: IPR011898; pyruvate ferredoxin oxidoreductase 1127129 porD 12365927 porD Helicobacter pylori 83 pyruvate ferredoxin oxidoreductase YP_005785688.1 1126737 D 585538 CDS YP_005785689.1 385225764 12365928 1127140..1128363 1 NC_017375.1 COG: COG0674; Pfam: PF01855; InterPro: IPR002880; pyruvate ferredoxin oxidoreductase subunit alpha 1128363 porA 12365928 porA Helicobacter pylori 83 pyruvate ferredoxin oxidoreductase subunit alpha YP_005785689.1 1127140 D 585538 CDS YP_005785690.1 385225765 12365929 1128376..1129320 1 NC_017375.1 COG: COG1013; Pfam: PF02775; InterPro: IPR011766; pyruvate ferredoxin oxidoreductase subunit beta 1129320 porB 12365929 porB Helicobacter pylori 83 pyruvate ferredoxin oxidoreductase subunit beta YP_005785690.1 1128376 D 585538 CDS YP_005785691.1 385225766 12365930 1129430..1130752 1 NC_017375.1 COG: COG0015; Pfam: PF00206; InterPro: IPR004769; adenylosuccinate lyase 1130752 purB 12365930 purB Helicobacter pylori 83 adenylosuccinate lyase YP_005785691.1 1129430 D 585538 CDS YP_005785692.1 385225767 12365931 1130814..1131647 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1131647 12365931 HMPREF0462_1126 Helicobacter pylori 83 outer membrane protein YP_005785692.1 1130814 D 585538 CDS YP_005785693.1 385225768 12365932 complement(1131644..1133635) 1 NC_017375.1 COG: COG0556; Pfam: PF04851,PF00271,PF02151; InterPro: IPR004807; excision endonuclease subunit UvrB 1133635 uvrB 12365932 uvrB Helicobacter pylori 83 excision endonuclease subunit UvrB YP_005785693.1 1131644 R 585538 CDS YP_005785694.1 385225769 12365933 complement(1134768..1135631) 1 NC_017375.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; cysteine-rich protein X 1135631 12365933 HMPREF0462_1128 Helicobacter pylori 83 cysteine-rich protein X YP_005785694.1 1134768 R 585538 CDS YP_005785695.1 385225770 12365934 complement(1135822..1137525) 1 NC_017375.1 COG: COG0405; Pfam: PF01019; InterPro: IPR000101; gamma-glutamyltransferase 1137525 ggt 12365934 ggt Helicobacter pylori 83 gamma-glutamyltransferase YP_005785695.1 1135822 R 585538 CDS YP_005785696.1 385225771 12365935 complement(1137728..1139548) 1 NC_017375.1 COG: COG1256; Pfam: PF00460,PF06429; InterPro: IPR002371; flagellar hook-associated protein FlgK 1139548 flgK 12365935 flgK Helicobacter pylori 83 flagellar hook-associated protein FlgK YP_005785696.1 1137728 R 585538 CDS YP_005785697.1 385225772 12365936 complement(1139550..1140020) 1 NC_017375.1 hypothetical protein 1140020 12365936 HMPREF0462_1131 Helicobacter pylori 83 hypothetical protein YP_005785697.1 1139550 R 585538 CDS YP_005785698.1 385225773 12365937 complement(1140111..1141070) 1 NC_017375.1 COG: COG0270; Pfam: PF00145; InterPro: IPR001525; C-5 cytosine-specific DNA methylase 1141070 bsp6IM 12365937 bsp6IM Helicobacter pylori 83 C-5 cytosine-specific DNA methylase YP_005785698.1 1140111 R 585538 CDS YP_005785699.1 385225774 12365938 complement(1141208..1141411) 1 NC_017375.1 Pfam: PF05998; InterPro: IPR009250; negative regulator of flagellin synthesis FlgM 1141411 flgM 12365938 flgM Helicobacter pylori 83 negative regulator of flagellin synthesis FlgM YP_005785699.1 1141208 R 585538 CDS YP_005785700.1 385225775 12365939 complement(1141474..1141680) 1 NC_017375.1 hypothetical protein 1141680 12365939 HMPREF0462_1134 Helicobacter pylori 83 hypothetical protein YP_005785700.1 1141474 R 585538 CDS YP_005785701.1 385225776 12365940 complement(1141712..1142260) 1 NC_017375.1 COG: COG1047; Pfam: PF00254; InterPro: IPR001179; peptidyl-prolyl cis-trans isomerase 1142260 slyD 12365940 slyD Helicobacter pylori 83 peptidyl-prolyl cis-trans isomerase YP_005785701.1 1141712 R 585538 CDS YP_005785702.1 385225777 12365941 complement(1142247..1143242) 1 NC_017375.1 Pfam: PF07719; hypothetical protein 1143242 12365941 HMPREF0462_1136 Helicobacter pylori 83 hypothetical protein YP_005785702.1 1142247 R 585538 CDS YP_005785703.1 385225778 12365942 complement(1143250..1143789) 1 NC_017375.1 COG: COG2885; Pfam: PF00691; InterPro: IPR006665; peptidoglycan associated lipoprotein 1143789 12365942 HMPREF0462_1137 Helicobacter pylori 83 peptidoglycan associated lipoprotein YP_005785703.1 1143250 R 585538 CDS YP_005785704.1 385225779 12365943 complement(1143855..1145108) 1 NC_017375.1 COG: COG0823; Pfam: PF04052,PF07676; InterPro: IPR014167; tol-Pal system beta propeller repeat protein TolB 1145108 tolB 12365943 tolB Helicobacter pylori 83 tol-Pal system beta propeller repeat protein TolB YP_005785704.1 1143855 R 585538 CDS YP_005785705.1 385225780 12365944 complement(1145105..1145893) 1 NC_017375.1 hypothetical protein 1145893 12365944 HMPREF0462_1139 Helicobacter pylori 83 hypothetical protein YP_005785705.1 1145105 R 585538 CDS YP_005785706.1 385225781 12365945 complement(1145912..1146313) 1 NC_017375.1 COG: COG0848; Pfam: PF02472; InterPro: IPR003400; TolR colicin import membrane protein 1146313 12365945 HMPREF0462_1140 Helicobacter pylori 83 TolR colicin import membrane protein YP_005785706.1 1145912 R 585538 CDS YP_005785707.1 385225782 12365946 complement(1146366..1146959) 1 NC_017375.1 COG: COG0811; Pfam: PF01618; InterPro: IPR002898; biopolymer transporter 1146959 exbB 12365946 exbB Helicobacter pylori 83 biopolymer transporter YP_005785707.1 1146366 R 585538 CDS YP_005785708.1 385225783 12365947 complement(1146946..1147317) 1 NC_017375.1 COG: COG0355; Pfam: PF02823; InterPro: IPR001469; ATP synthase F1 sector epsilon subunit 1147317 atpC 12365947 atpC Helicobacter pylori 83 ATP synthase F1 sector epsilon subunit YP_005785708.1 1146946 R 585538 CDS YP_005785709.1 385225784 12365948 complement(1147328..1148737) 1 NC_017375.1 COG: COG0055; Pfam: PF02874,PF00006,PF00306; InterPro: IPR005722; ATP synthase F1 sector beta subunit 1148737 atpD 12365948 atpD Helicobacter pylori 83 ATP synthase F1 sector beta subunit YP_005785709.1 1147328 R 585538 CDS YP_005785710.1 385225785 12365949 complement(1148757..1149662) 1 NC_017375.1 COG: COG0224; Pfam: PF00231; InterPro: IPR000131; ATP synthase F1 sector gamma subunit 1149662 atpG 12365949 atpG Helicobacter pylori 83 ATP synthase F1 sector gamma subunit YP_005785710.1 1148757 R 585538 CDS YP_005785711.1 385225786 12365950 complement(1149677..1151188) 1 NC_017375.1 COG: COG0056; Pfam: PF02874,PF00006,PF00306; InterPro: IPR005294; ATP synthase F1 subcomplex subunit alpha 1151188 atpA 12365950 atpA Helicobacter pylori 83 ATP synthase F1 subcomplex subunit alpha YP_005785711.1 1149677 R 585538 CDS YP_005785712.1 385225787 12365951 complement(1151211..1151753) 1 NC_017375.1 ATP synthase F1 sector delta subunit 1151753 atpH 12365951 atpH Helicobacter pylori 83 ATP synthase F1 sector delta subunit YP_005785712.1 1151211 R 585538 CDS YP_005785713.1 385225788 12365952 complement(1151754..1152269) 1 NC_017375.1 Pfam: PF00430; ATP synthase subunit B 1152269 12365952 HMPREF0462_1147 Helicobacter pylori 83 ATP synthase subunit B YP_005785713.1 1151754 R 585538 CDS YP_005785714.1 385225789 12365953 complement(1152273..1152707) 1 NC_017375.1 Pfam: PF00430; ATP synthase F0 1152707 atpF' 12365953 atpF' Helicobacter pylori 83 ATP synthase F0 YP_005785714.1 1152273 R 585538 CDS YP_005785715.1 385225790 12365954 complement(1152818..1153690) 1 NC_017375.1 COG: COG1475; Pfam: PF02195; InterPro: IPR004437; stage 0 DNA-binding protein 1153690 spo0J 12365954 spo0J Helicobacter pylori 83 stage 0 DNA-binding protein YP_005785715.1 1152818 R 585538 CDS YP_005785716.1 385225791 12365955 complement(1153693..1154496) 1 NC_017375.1 COG: COG1192; Pfam: PF01656; InterPro: IPR002586; sporulation initiation inhibitor protein Soj 1154496 soj 12365955 soj Helicobacter pylori 83 sporulation initiation inhibitor protein Soj YP_005785716.1 1153693 R 585538 CDS YP_005785717.1 385225792 12365956 complement(1154493..1155131) 1 NC_017375.1 COG: COG0340; Pfam: PF03099,PF02237; InterPro: IPR004408; biotin--protein ligase 1155131 birA 12365956 birA Helicobacter pylori 83 biotin--protein ligase YP_005785717.1 1154493 R 585538 CDS YP_005785718.1 385225793 12365957 complement(1155128..1156039) 1 NC_017375.1 COG: COG0223; Pfam: PF00551,PF02911; InterPro: IPR005794; methionyl-tRNA formyltransferase 1156039 fmt 12365957 fmt Helicobacter pylori 83 methionyl-tRNA formyltransferase YP_005785718.1 1155128 R 585538 CDS YP_005785719.1 385225794 12365958 complement(1156063..1158342) 1 NC_017375.1 hypothetical protein 1158342 12365958 HMPREF0462_1153 Helicobacter pylori 83 hypothetical protein YP_005785719.1 1156063 R 585538 CDS YP_005785720.1 385225795 12365959 complement(1158384..1159685) 1 NC_017375.1 COG: COG4487; hypothetical protein 1159685 12365959 HMPREF0462_1154 Helicobacter pylori 83 hypothetical protein YP_005785720.1 1158384 R 585538 CDS YP_005785721.1 385225796 12365961 complement(1162793..1163593) 1 NC_017375.1 COG: COG1432; hypothetical protein 1163593 12365961 HMPREF0462_1155 Helicobacter pylori 83 hypothetical protein YP_005785721.1 1162793 R 585538 CDS YP_005785722.1 385225797 12365962 complement(1163906..1164262) 1 NC_017375.1 COG: COG0335; Pfam: PF01245; InterPro: IPR001857; 50S ribosomal protein L19 1164262 rplS 12365962 rplS Helicobacter pylori 83 50S ribosomal protein L19 YP_005785722.1 1163906 R 585538 CDS YP_005785723.1 385225798 12365963 complement(1164284..1164973) 1 NC_017375.1 COG: COG0336; Pfam: PF01746; InterPro: IPR002649; tRNA (guanine-N1)-methyltransferase 1164973 trmD 12365963 trmD Helicobacter pylori 83 tRNA (guanine-N1)-methyltransferase YP_005785723.1 1164284 R 585538 CDS YP_005785724.1 385225799 12365964 complement(1164974..1165528) 1 NC_017375.1 COG: COG0806; Pfam: PF01782,PF05239; InterPro: IPR011961; 16S rRNA processing protein RimM 1165528 rimM 12365964 rimM Helicobacter pylori 83 16S rRNA processing protein RimM YP_005785724.1 1164974 R 585538 CDS YP_005785725.1 385225800 12365965 complement(1165529..1165876) 1 NC_017375.1 COG: COG1837; hypothetical protein 1165876 12365965 HMPREF0462_1159 Helicobacter pylori 83 hypothetical protein YP_005785725.1 1165529 R 585538 CDS YP_005785726.1 385225801 12365966 complement(1165893..1166123) 1 NC_017375.1 COG: COG0228; Pfam: PF00886; InterPro: IPR000307; 30S ribosomal protein S16 1166123 rpsP 12365966 rpsP Helicobacter pylori 83 30S ribosomal protein S16 YP_005785726.1 1165893 R 585538 CDS YP_005785727.1 385225802 12365967 complement(1166197..1167543) 1 NC_017375.1 COG: COG0541; Pfam: PF02881,PF00448,PF02978; InterPro: IPR004780; signal recognition particle protein 1167543 ffh 12365967 ffh Helicobacter pylori 83 signal recognition particle protein YP_005785727.1 1166197 R 585538 CDS YP_005785728.1 385225803 12365968 complement(1167558..1170176) 1 NC_017375.1 COG: COG0525; Pfam: PF00133,PF08264; InterPro: IPR002303; valine--tRNA ligase 1170176 valS 12365968 valS Helicobacter pylori 83 valine--tRNA ligase YP_005785728.1 1167558 R 585538 CDS YP_005785729.1 385225804 12365969 1170168..1170293 1 NC_017375.1 hypothetical protein 1170293 12365969 HMPREF0462_1163 Helicobacter pylori 83 hypothetical protein YP_005785729.1 1170168 D 585538 CDS YP_005785730.1 385225805 12365970 1170312..1170719 1 NC_017375.1 COG: COG1699; Pfam: PF02623; InterPro: IPR003775; flagellar assembly factor FliW 1 1170719 12365970 HMPREF0462_1164 Helicobacter pylori 83 flagellar assembly factor FliW 1 YP_005785730.1 1170312 D 585538 CDS YP_005785731.1 385225806 12365971 1170731..1171792 1 NC_017375.1 COG: COG0707; Pfam: PF03033,PF04101; InterPro: IPR006009; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 1171792 murG 12365971 murG Helicobacter pylori 83 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_005785731.1 1170731 D 585538 CDS YP_005785732.1 385225807 12365972 1171901..1173991 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1173991 12365972 HMPREF0462_1166 Helicobacter pylori 83 outer membrane protein YP_005785732.1 1171901 D 585538 CDS YP_005785733.1 385225808 12365973 1174014..1177745 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1177745 12365973 HMPREF0462_1167 Helicobacter pylori 83 outer membrane protein YP_005785733.1 1174014 D 585538 CDS YP_005785734.1 385225809 12365974 1177759..1178553 1 NC_017375.1 COG: COG0345; Pfam: PF03807; InterPro: IPR000304; pyrroline-5-carboxylate reductase 1178553 proC 12365974 proC Helicobacter pylori 83 pyrroline-5-carboxylate reductase YP_005785734.1 1177759 D 585538 CDS YP_005785735.1 385225810 12365975 1178559..1179092 1 NC_017375.1 COG: COG2184; Pfam: PF02661; InterPro: IPR003812; cell filamentation protein 1179092 fic 12365975 fic Helicobacter pylori 83 cell filamentation protein YP_005785735.1 1178559 D 585538 CDS YP_005785736.1 385225811 12365976 complement(1179107..1179346) 1 NC_017375.1 hypothetical protein 1179346 12365976 HMPREF0462_1170 Helicobacter pylori 83 hypothetical protein YP_005785736.1 1179107 R 585538 CDS YP_005785737.1 385225812 12365977 complement(1179413..1179871) 1 NC_017375.1 hypothetical protein 1179871 12365977 HMPREF0462_1171 Helicobacter pylori 83 hypothetical protein YP_005785737.1 1179413 R 585538 CDS YP_005785738.1 385225813 12365978 complement(1179877..1180359) 1 NC_017375.1 hypothetical protein 1180359 12365978 HMPREF0462_1172 Helicobacter pylori 83 hypothetical protein YP_005785738.1 1179877 R 585538 CDS YP_005785739.1 385225814 12365979 complement(1180453..1180881) 1 NC_017375.1 COG: COG0319; Pfam: PF02130; InterPro: IPR002036; metalloprotease 1180881 12365979 HMPREF0462_1173 Helicobacter pylori 83 metalloprotease YP_005785739.1 1180453 R 585538 CDS YP_005785740.1 385225815 12365980 complement(1180934..1181428) 1 NC_017375.1 COG: COG0716; Pfam: PF00258; InterPro: IPR010086; flavodoxin 1181428 12365980 HMPREF0462_1174 Helicobacter pylori 83 flavodoxin YP_005785740.1 1180934 R 585538 CDS YP_005785741.1 385225816 12365981 complement(1181519..1182100) 1 NC_017375.1 COG: COG0586; integral membrane protein 1182100 12365981 HMPREF0462_1175 Helicobacter pylori 83 integral membrane protein YP_005785741.1 1181519 R 585538 CDS YP_005785742.1 385225817 12365982 1182228..1182419 1 NC_017375.1 COG: COG3197; Pfam: PF03597; InterPro: IPR004714; cytochrome oxidase maturation protein 1182419 ccoS 12365982 ccoS Helicobacter pylori 83 cytochrome oxidase maturation protein YP_005785742.1 1182228 D 585538 CDS YP_005785743.1 385225818 12365983 1182441..1183409 1 NC_017375.1 COG: COG0492; Pfam: PF00890,PF00070; pyridine nucleotide-disulfide oxidoreductase 1183409 trxB2 12365983 trxB2 Helicobacter pylori 83 pyridine nucleotide-disulfide oxidoreductase YP_005785743.1 1182441 D 585538 CDS YP_005785744.1 385225819 12365984 complement(1183604..1184770) 1 NC_017375.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; MccC family protein 1184770 12365984 HMPREF0462_1178 Helicobacter pylori 83 MccC family protein YP_005785744.1 1183604 R 585538 CDS YP_005785745.1 385225820 12365985 1184835..1186472 1 NC_017375.1 COG: COG0166; Pfam: PF00342; InterPro: IPR001672; glucose-6-phosphate isomerase 1186472 pgi 12365985 pgi Helicobacter pylori 83 glucose-6-phosphate isomerase YP_005785745.1 1184835 D 585538 CDS YP_005785746.1 385225821 12365986 1186778..1188193 1 NC_017375.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 1188193 hofH 12365986 hofH Helicobacter pylori 83 hof-family outer membrane protein YP_005785746.1 1186778 D 585538 CDS YP_005785747.1 385225822 12365987 complement(1188537..1190630) 1 NC_017375.1 COG: COG1966; Pfam: PF02554; InterPro: IPR003706; carbon starvation protein A 1190630 cstA 12365987 cstA Helicobacter pylori 83 carbon starvation protein A YP_005785747.1 1188537 R 585538 CDS YP_005785748.1 385225823 12365988 1190811..1191464 1 NC_017375.1 COG: COG0765; Pfam: PF00528; InterPro: IPR000515; glutamine ABC superfamily ATP binding cassette transporter, membrane protein 1191464 glnP 12365988 glnP Helicobacter pylori 83 glutamine ABC superfamily ATP binding cassette transporter, membrane protein YP_005785748.1 1190811 D 585538 CDS YP_005785749.1 385225824 12365989 1191467..1192138 1 NC_017375.1 COG: COG0765; Pfam: PF00528; InterPro: IPR000515; glutamine ABC superfamily ATP binding cassette transporter, membrane protein 1192138 glnP2 12365989 glnP2 Helicobacter pylori 83 glutamine ABC superfamily ATP binding cassette transporter, membrane protein YP_005785749.1 1191467 D 585538 CDS YP_005785750.1 385225825 12365990 1192140..1192886 1 NC_017375.1 COG: COG1126; Pfam: PF00005; InterPro: IPR003439; glutamine ABC superfamily ATP binding cassette transporter, ABC protein 1192886 glnQ 12365990 glnQ Helicobacter pylori 83 glutamine ABC superfamily ATP binding cassette transporter, ABC protein YP_005785750.1 1192140 D 585538 CDS YP_005785751.1 385225826 12365991 1192905..1193768 1 NC_017375.1 COG: COG0834; Pfam: PF00497; InterPro: IPR001638; ABC superfamily ATP binding cassette transporter, binding protein 1193768 cjaA 12365991 cjaA Helicobacter pylori 83 ABC superfamily ATP binding cassette transporter, binding protein YP_005785751.1 1192905 D 585538 CDS YP_005785752.1 385225827 12365992 1193889..1194440 1 NC_017375.1 hypothetical protein 1194440 12365992 HMPREF0462_1186 Helicobacter pylori 83 hypothetical protein YP_005785752.1 1193889 D 585538 CDS YP_005785753.1 385225828 12365993 complement(1194677..1195888) 1 NC_017375.1 COG: COG0738; Pfam: PF07690; InterPro: IPR011701; glucose/galactose transporter 1195888 gluP 12365993 gluP Helicobacter pylori 83 glucose/galactose transporter YP_005785753.1 1194677 R 585538 CDS YP_005785754.1 385225829 12365994 complement(1196018..1197325) 1 NC_017375.1 COG: COG2252; Pfam: PF00860; InterPro: IPR006043; NCS2 family nucleobase:cation symporter-2 1197325 yieG 12365994 yieG Helicobacter pylori 83 NCS2 family nucleobase:cation symporter-2 YP_005785754.1 1196018 R 585538 CDS YP_005785755.1 385225830 12365995 complement(1197754..1199679) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1199679 12365995 HMPREF0462_1189 Helicobacter pylori 83 outer membrane protein YP_005785755.1 1197754 R 585538 CDS YP_005785756.1 385225831 12365996 complement(1199805..1200038) 1 NC_017375.1 hypothetical protein 1200038 12365996 HMPREF0462_1190 Helicobacter pylori 83 hypothetical protein YP_005785756.1 1199805 R 585538 CDS YP_005785757.1 385225832 12365997 complement(1200128..1200829) 1 NC_017375.1 COG: COG0813; Pfam: PF01048; InterPro: IPR000845; purine nucleoside phosphorylase 1200829 deoD 12365997 deoD Helicobacter pylori 83 purine nucleoside phosphorylase YP_005785757.1 1200128 R 585538 CDS YP_005785758.1 385225833 12365998 complement(1200826..1202067) 1 NC_017375.1 COG: COG1015; Pfam: PF08342,PF01676; InterPro: IPR010045; phosphopentomutase 1202067 deoB 12365998 deoB Helicobacter pylori 83 phosphopentomutase YP_005785758.1 1200826 R 585538 CDS YP_005785759.1 385225834 12365999 complement(1202079..1203335) 1 NC_017375.1 COG: COG1972; Pfam: PF01773,PF07670,PF07662; InterPro: IPR008276; CNT family concentrative nucleoside transporter 1203335 nupC 12365999 nupC Helicobacter pylori 83 CNT family concentrative nucleoside transporter YP_005785759.1 1202079 R 585538 CDS YP_005785760.1 385225835 12366001 1203661..1204992 1 NC_017375.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; multidrug-efflux transporter 1204992 12366001 HMPREF0462_1194 Helicobacter pylori 83 multidrug-efflux transporter YP_005785760.1 1203661 D 585538 CDS YP_005785761.1 385225836 12366002 1205021..1205782 1 NC_017375.1 COG: COG0037; Pfam: PF01171; InterPro: IPR014729; PP-loop family protein 1205782 12366002 HMPREF0462_1195 Helicobacter pylori 83 PP-loop family protein YP_005785761.1 1205021 D 585538 CDS YP_005785762.1 385225837 12366003 complement(1205792..1206943) 1 NC_017375.1 COG: COG0475; Pfam: PF00999; InterPro: IPR006153; periplasmic nitrate reductase NapA 1206943 napA 12366003 napA Helicobacter pylori 83 periplasmic nitrate reductase NapA YP_005785762.1 1205792 R 585538 CDS YP_005785763.1 385225838 12366004 complement(1206969..1208348) 1 NC_017375.1 COG: COG0534; Pfam: PF01554; InterPro: IPR002528; hypothetical protein 1208348 12366004 HMPREF0462_1197 Helicobacter pylori 83 hypothetical protein YP_005785763.1 1206969 R 585538 CDS YP_005785764.1 385225839 12366005 complement(1208509..1209684) 1 NC_017375.1 COG: COG2814; Pfam: PF07690; InterPro: IPR011701; major facilitator family transporter 1209684 12366005 HMPREF0462_1198 Helicobacter pylori 83 major facilitator family transporter YP_005785764.1 1208509 R 585538 CDS YP_005785765.1 385225840 12366006 1209960..1210703 1 NC_017375.1 COG: COG3338; Pfam: PF00194; InterPro: IPR001148; carbonate dehydratase 1210703 cah 12366006 cah Helicobacter pylori 83 carbonate dehydratase YP_005785765.1 1209960 D 585538 CDS YP_005785766.1 385225841 12366007 complement(1210939..1212099) 1 NC_017375.1 Pfam: PF05917; InterPro: IPR008592; hypothetical protein 1212099 12366007 HMPREF0462_1200 Helicobacter pylori 83 hypothetical protein YP_005785766.1 1210939 R 585538 CDS YP_005785767.1 385225842 12366008 complement(1212530..1213570) 1 NC_017375.1 COG: COG0136; Pfam: PF01118,PF02774; InterPro: IPR005986; aspartate-semialdehyde dehydrogenase 1213570 asd 12366008 asd Helicobacter pylori 83 aspartate-semialdehyde dehydrogenase YP_005785767.1 1212530 R 585538 CDS YP_005785768.1 385225843 12366009 complement(1213557..1214885) 1 NC_017375.1 COG: COG0124; Pfam: PF00587,PF03129; InterPro: IPR015805; histidine--tRNA ligase 1214885 hisS 12366009 hisS Helicobacter pylori 83 histidine--tRNA ligase YP_005785768.1 1213557 R 585538 CDS YP_005785769.1 385225844 12366010 1214947..1215996 1 NC_017375.1 COG: COG0859; Pfam: PF01075; InterPro: IPR011910; heptosyltransferase II (RfaF) 1215996 rfaF 12366010 rfaF Helicobacter pylori 83 heptosyltransferase II (RfaF) YP_005785769.1 1214947 D 585538 CDS YP_005785770.1 385225845 12366011 complement(1216183..1216401) 1 NC_017375.1 secreted protein 1216401 12366011 HMPREF0462_1204 Helicobacter pylori 83 secreted protein YP_005785770.1 1216183 R 585538 CDS YP_005785771.1 385225846 12366012 1216620..1216745 1 NC_017375.1 hypothetical protein 1216745 12366012 HMPREF0462_1205 Helicobacter pylori 83 hypothetical protein YP_005785771.1 1216620 D 585538 CDS YP_005785772.1 385225847 12366013 complement(1216981..1219059) 1 NC_017375.1 COG: COG0480; Pfam: PF00009,PF03144,PF03764,PF00679; InterPro: IPR004540; elongation factor G 1219059 fusA 12366013 fusA Helicobacter pylori 83 elongation factor G YP_005785772.1 1216981 R 585538 CDS YP_005785773.1 385225848 12366014 complement(1219071..1219538) 1 NC_017375.1 COG: COG0049; Pfam: PF00177; InterPro: IPR000235; 30S ribosomal protein S7 1219538 rpsG 12366014 rpsG Helicobacter pylori 83 30S ribosomal protein S7 YP_005785773.1 1219071 R 585538 CDS YP_005785774.1 385225849 12366015 complement(1219554..1219961) 1 NC_017375.1 COG: COG0048; Pfam: PF00164; InterPro: IPR012340; 30S ribosomal protein S12 1219961 rpsL 12366015 rpsL Helicobacter pylori 83 30S ribosomal protein S12 YP_005785774.1 1219554 R 585538 CDS YP_005785775.1 385225850 12366016 complement(1220049..1228721) 1 NC_017375.1 COG: COG0086; Pfam: PF04563,PF04561,PF04565,PF00562,PF04560,PF04997,PF00623, PF04983,PF05000,PF04998; InterPro: IPR012754; DNA-directed RNA polymerase 1228721 rpoBC 12366016 rpoBC Helicobacter pylori 83 DNA-directed RNA polymerase YP_005785775.1 1220049 R 585538 CDS YP_005785776.1 385225851 12366017 complement(1228946..1229323) 1 NC_017375.1 COG: COG0222; Pfam: PF00542; InterPro: IPR000206; 50S ribosomal protein L7/L12 1229323 rplL 12366017 rplL Helicobacter pylori 83 50S ribosomal protein L7/L12 YP_005785776.1 1228946 R 585538 CDS YP_005785777.1 385225852 12366018 complement(1229368..1229862) 1 NC_017375.1 COG: COG0244; Pfam: PF00466; InterPro: IPR001790; 50S ribosomal protein L10 1229862 rplJ 12366018 rplJ Helicobacter pylori 83 50S ribosomal protein L10 YP_005785777.1 1229368 R 585538 CDS YP_005785778.1 385225853 12366019 complement(1229971..1230675) 1 NC_017375.1 COG: COG0081; Pfam: PF00687; InterPro: IPR005878; 50S ribosomal protein L1 1230675 rplA 12366019 rplA Helicobacter pylori 83 50S ribosomal protein L1 YP_005785778.1 1229971 R 585538 CDS YP_005785779.1 385225854 12366020 complement(1230720..1231145) 1 NC_017375.1 COG: COG0080; Pfam: PF03946,PF00298; InterPro: IPR006519; 50S ribosomal protein L11 1231145 rplK 12366020 rplK Helicobacter pylori 83 50S ribosomal protein L11 YP_005785779.1 1230720 R 585538 CDS YP_005785780.1 385225855 12366021 complement(1231163..1231696) 1 NC_017375.1 COG: COG0250; Pfam: PF02357,PF00467; InterPro: IPR001062; transcription termination/antitermination factor NusG 1231696 nusG 12366021 nusG Helicobacter pylori 83 transcription termination/antitermination factor NusG YP_005785780.1 1231163 R 585538 CDS YP_005785781.1 385225856 12366022 complement(1231720..1231899) 1 NC_017375.1 preprotein translocase 1231899 secE 12366022 secE Helicobacter pylori 83 preprotein translocase YP_005785781.1 1231720 R 585538 CDS YP_005785782.1 385225857 12366024 complement(1232157..1232315) 1 NC_017375.1 COG: COG0267; Pfam: PF00471; InterPro: IPR001705; 50S ribosomal protein L33 1232315 rpmG 12366024 rpmG Helicobacter pylori 83 50S ribosomal protein L33 YP_005785782.1 1232157 R 585538 CDS YP_005785783.1 385225858 12366025 complement(1232349..1233548) 1 NC_017375.1 COG: COG0050; Pfam: PF00009,PF03144,PF03143; InterPro: IPR004541; elongation factor EF1A 1233548 12366025 HMPREF0462_1217 Helicobacter pylori 83 elongation factor EF1A YP_005785783.1 1232349 R 585538 CDS YP_005785784.1 385225859 12366030 1234255..1235991 1 NC_017375.1 COG: COG1132; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC and permease protein 1235991 wlaB 12366030 wlaB Helicobacter pylori 83 ABC superfamily ATP binding cassette transporter, ABC and permease protein YP_005785784.1 1234255 D 585538 CDS YP_005785785.1 385225860 12366031 complement(1236000..1236668) 1 NC_017375.1 Pfam: PF00702; InterPro: IPR005834; hypothetical protein 1236668 12366031 HMPREF0462_1219 Helicobacter pylori 83 hypothetical protein YP_005785785.1 1236000 R 585538 CDS YP_005785786.1 385225861 12366032 complement(1236771..1237760) 1 NC_017375.1 COG: COG3392; Pfam: PF02086; InterPro: IPR012327; modification methylase NlaIII 1237760 hpyIM 12366032 hpyIM Helicobacter pylori 83 modification methylase NlaIII YP_005785786.1 1236771 R 585538 CDS YP_005785787.1 385225862 12366033 complement(1237769..1238251) 1 NC_017375.1 Pfam: PF05315; InterPro: IPR007979; type II restriction enzyme NlaIII 1238251 iceA 12366033 iceA Helicobacter pylori 83 type II restriction enzyme NlaIII YP_005785787.1 1237769 R 585538 CDS YP_005785788.1 385225863 12366034 complement(1238255..1238398) 1 NC_017375.1 Pfam: PF05315; InterPro: IPR007979; iceA1 1238398 12366034 HMPREF0462_1222 Helicobacter pylori 83 iceA1 YP_005785788.1 1238255 R 585538 CDS YP_005785789.1 385225864 12366035 complement(1238450..1238965) 1 NC_017375.1 COG: COG1045; Pfam: PF00132; InterPro: IPR005881; serine O-acetyltransferase 1238965 cysE 12366035 cysE Helicobacter pylori 83 serine O-acetyltransferase YP_005785789.1 1238450 R 585538 CDS YP_005785790.1 385225865 12366037 complement(1239006..1239125) 1 NC_017375.1 hypothetical protein 1239125 12366037 HMPREF0462_1224 Helicobacter pylori 83 hypothetical protein YP_005785790.1 1239006 R 585538 CDS YP_005785791.1 385225866 12366042 complement(1239642..1239959) 1 NC_017375.1 COG: COG0636; Pfam: PF00137; InterPro: IPR002379; ATP synthase F0 subunit C 1239959 atpE 12366042 atpE Helicobacter pylori 83 ATP synthase F0 subunit C YP_005785791.1 1239642 R 585538 CDS YP_005785792.1 385225867 12366043 complement(1240057..1240179) 1 NC_017375.1 hypothetical protein 1240179 12366043 HMPREF0462_1226 Helicobacter pylori 83 hypothetical protein YP_005785792.1 1240057 R 585538 CDS YP_005785793.1 385225868 12366044 1240339..1241019 1 NC_017375.1 cell division protein FtsB-like protein 1241019 12366044 HMPREF0462_1227 Helicobacter pylori 83 cell division protein FtsB-like protein YP_005785793.1 1240339 D 585538 CDS YP_005785794.1 385225869 12366045 complement(1241410..1243476) 1 NC_017375.1 COG: COG1185; Pfam: PF01138,PF03725,PF03726,PF00013,PF00575; InterPro: IPR012162; polyribonucleotide nucleotidyltransferase 1243476 pnp 12366045 pnp Helicobacter pylori 83 polyribonucleotide nucleotidyltransferase YP_005785794.1 1241410 R 585538 CDS YP_005785795.1 385225870 12366046 complement(1243479..1244201) 1 NC_017375.1 COG: COG1926; hypothetical protein 1244201 12366046 HMPREF0462_1229 Helicobacter pylori 83 hypothetical protein YP_005785795.1 1243479 R 585538 CDS YP_005785796.1 385225871 12366047 complement(1244198..1246459) 1 NC_017375.1 COG: COG1452; Pfam: PF04453; InterPro: IPR007543; organic solvent tolerance protein 1246459 ostA 12366047 ostA Helicobacter pylori 83 organic solvent tolerance protein YP_005785796.1 1244198 R 585538 CDS YP_005785797.1 385225872 12366048 complement(1246462..1246941) 1 NC_017375.1 hypothetical protein 1246941 12366048 HMPREF0462_1231 Helicobacter pylori 83 hypothetical protein YP_005785797.1 1246462 R 585538 CDS YP_005785798.1 385225873 12366050 complement(1246983..1248257) 1 NC_017375.1 COG: COG0151; Pfam: PF02844,PF01071,PF02843; InterPro: IPR000115; phosphoribosylamine--glycine ligase 1248257 purD 12366050 purD Helicobacter pylori 83 phosphoribosylamine--glycine ligase YP_005785798.1 1246983 R 585538 CDS YP_005785799.1 385225874 12366052 1248376..1248567 1 NC_017375.1 hypothetical protein 1248567 12366052 HMPREF0462_1233 Helicobacter pylori 83 hypothetical protein YP_005785799.1 1248376 D 585538 CDS YP_005785800.1 385225875 12366053 complement(1248569..1249255) 1 NC_017375.1 COG: COG1131; Pfam: PF00005; InterPro: IPR003439; ABC transporter ATP-binding protein 1249255 yhcG 12366053 yhcG Helicobacter pylori 83 ABC transporter ATP-binding protein YP_005785800.1 1248569 R 585538 CDS YP_005785801.1 385225876 12366054 complement(1249249..1249953) 1 NC_017375.1 COG: COG0020; Pfam: PF01255; InterPro: IPR001441; di-trans,poly-cis-decaprenylcistransferase 1249953 uppS 12366054 uppS Helicobacter pylori 83 di-trans,poly-cis-decaprenylcistransferase YP_005785801.1 1249249 R 585538 CDS YP_005785802.1 385225877 12366055 complement(1249993..1252833) 1 NC_017375.1 COG: COG0277; Pfam: PF01565,PF02913,PF00037; InterPro: IPR004113; oxidoreductase 1252833 dld 12366055 dld Helicobacter pylori 83 oxidoreductase YP_005785802.1 1249993 R 585538 CDS YP_005785803.1 385225878 12366056 1252905..1253237 1 NC_017375.1 COG: COG0607; Pfam: PF00581; InterPro: IPR001763; hypothetical protein 1253237 12366056 HMPREF0462_1237 Helicobacter pylori 83 hypothetical protein YP_005785803.1 1252905 D 585538 CDS YP_005785804.1 385225879 12366057 1253240..1253920 1 NC_017375.1 COG: COG1587; Pfam: PF02602; InterPro: IPR003754; uroporphyrinogen-III synthase 1253920 hemD 12366057 hemD Helicobacter pylori 83 uroporphyrinogen-III synthase YP_005785804.1 1253240 D 585538 CDS YP_005785805.1 385225880 12366058 1253967..1254359 1 NC_017375.1 COG: COG0239; Pfam: PF02537; InterPro: IPR003691; camphor resistance protein CrcB 1254359 crcB 12366058 crcB Helicobacter pylori 83 camphor resistance protein CrcB YP_005785805.1 1253967 D 585538 CDS YP_005785806.1 385225881 12366059 complement(1254404..1255462) 1 NC_017375.1 COG: COG0635; Pfam: PF04055,PF06969; InterPro: IPR004559; coproporphyrinogen dehydrogenase 1255462 12366059 HMPREF0462_1240 Helicobacter pylori 83 coproporphyrinogen dehydrogenase YP_005785806.1 1254404 R 585538 CDS YP_005785807.1 385225882 12366060 1255537..1255827 1 NC_017375.1 COG: COG2863; Pfam: PF00034; InterPro: IPR009056; cytochrome c-553 1255827 12366060 HMPREF0462_1241 Helicobacter pylori 83 cytochrome c-553 YP_005785807.1 1255537 D 585538 CDS YP_005785808.1 385225883 12366061 1255986..1256453 1 NC_017375.1 COG: COG0494; Pfam: PF00293; InterPro: IPR000086; dinucleoside polyphosphate hydrolase 1256453 nidH 12366061 nidH Helicobacter pylori 83 dinucleoside polyphosphate hydrolase YP_005785808.1 1255986 D 585538 CDS YP_005785809.1 385225884 12366062 1256455..1257672 1 NC_017375.1 COG: COG0527; Pfam: PF00696,PF01842; InterPro: IPR005260; aspartate kinase 1257672 lysC 12366062 lysC Helicobacter pylori 83 aspartate kinase YP_005785809.1 1256455 D 585538 CDS YP_005785810.1 385225885 12366063 1257669..1258211 1 NC_017375.1 hypothetical protein 1258211 12366063 HMPREF0462_1244 Helicobacter pylori 83 hypothetical protein YP_005785810.1 1257669 D 585538 CDS YP_005785811.1 385225886 12366064 1258208..1258864 1 NC_017375.1 DNA-directed DNA polymerase III subunit delta' 1258864 holB 12366064 holB Helicobacter pylori 83 DNA-directed DNA polymerase III subunit delta' YP_005785811.1 1258208 D 585538 CDS YP_005785812.1 385225887 12366065 1258861..1260003 1 NC_017375.1 COG: COG0294; Pfam: PF00809; InterPro: IPR000489; dihydropteroate synthase 1260003 folP 12366065 folP Helicobacter pylori 83 dihydropteroate synthase YP_005785812.1 1258861 D 585538 CDS YP_005785813.1 385225888 12366066 complement(1260028..1260489) 1 NC_017375.1 hypothetical protein 1260489 12366066 HMPREF0462_1247 Helicobacter pylori 83 hypothetical protein YP_005785813.1 1260028 R 585538 CDS YP_005785814.1 385225889 12366067 1260908..1261774 1 NC_017375.1 COG: COG0697; Pfam: PF00892; InterPro: IPR000620; hypothetical protein 1261774 12366067 HMPREF0462_1248 Helicobacter pylori 83 hypothetical protein YP_005785814.1 1260908 D 585538 CDS YP_005785815.1 385225890 12366068 1261778..1263025 1 NC_017375.1 integral membrane protein 1263025 12366068 HMPREF0462_1249 Helicobacter pylori 83 integral membrane protein YP_005785815.1 1261778 D 585538 CDS YP_005785816.1 385225891 12366069 1263104..1263655 1 NC_017375.1 COG: COG2952; Pfam: PF04368; InterPro: IPR007463; hypothetical protein 1263655 12366069 HMPREF0462_1250 Helicobacter pylori 83 hypothetical protein YP_005785816.1 1263104 D 585538 CDS YP_005785817.1 385225892 12366070 1263655..1264782 1 NC_017375.1 COG: COG0505; Pfam: PF00988,PF00117; InterPro: IPR006274; carbamoyl-phosphate synthase small subunit 1264782 carA 12366070 carA Helicobacter pylori 83 carbamoyl-phosphate synthase small subunit YP_005785817.1 1263655 D 585538 CDS YP_005785818.1 385225893 12366071 1264949..1265953 1 NC_017375.1 COG: COG0388; Pfam: PF00795; InterPro: IPR003010; aliphatic amidase 1265953 amiE2 12366071 amiE2 Helicobacter pylori 83 aliphatic amidase YP_005785818.1 1264949 D 585538 CDS YP_005785819.1 385225894 12366072 complement(1266461..1266610) 1 NC_017375.1 hypothetical protein 1266610 12366072 HMPREF0462_1253 Helicobacter pylori 83 hypothetical protein YP_005785819.1 1266461 R 585538 CDS YP_005785820.1 385225895 12366073 complement(1266628..1266843) 1 NC_017375.1 hypothetical protein 1266843 12366073 HMPREF0462_1254 Helicobacter pylori 83 hypothetical protein YP_005785820.1 1266628 R 585538 CDS YP_005785821.1 385225896 12366074 complement(1267018..1267179) 1 NC_017375.1 hypothetical protein 1267179 12366074 HMPREF0462_1255 Helicobacter pylori 83 hypothetical protein YP_005785821.1 1267018 R 585538 CDS YP_005785822.1 385225897 12366075 complement(1267285..1267857) 1 NC_017375.1 COG: COG0424; Pfam: PF02545; InterPro: IPR003697; septum formation protein Maf 1267857 maf2 12366075 maf2 Helicobacter pylori 83 septum formation protein Maf YP_005785822.1 1267285 R 585538 CDS YP_005785823.1 385225898 12366076 complement(1267859..1270402) 1 NC_017375.1 COG: COG0013; Pfam: PF01411,PF07973,PF02272; InterPro: IPR002318; alanine--tRNA ligase 1270402 alaS 12366076 alaS Helicobacter pylori 83 alanine--tRNA ligase YP_005785823.1 1267859 R 585538 CDS YP_005785824.1 385225899 12366077 1270522..1270752 1 NC_017375.1 COG: COG2841; Pfam: PF04325; InterPro: IPR007420; hypothetical protein 1270752 12366077 HMPREF0462_1258 Helicobacter pylori 83 hypothetical protein YP_005785824.1 1270522 D 585538 CDS YP_005785825.1 385225900 12366078 complement(1271587..1273707) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1273707 12366078 HMPREF0462_1259 Helicobacter pylori 83 outer membrane protein YP_005785825.1 1271587 R 585538 CDS YP_005785826.1 385225901 12366079 complement(1274185..1274442) 1 NC_017375.1 COG: COG0238; Pfam: PF01084; InterPro: IPR001648; 30S ribosomal protein S18 1274442 rpsR 12366079 rpsR Helicobacter pylori 83 30S ribosomal protein S18 YP_005785826.1 1274185 R 585538 CDS YP_005785827.1 385225902 12366080 complement(1274466..1275011) 1 NC_017375.1 COG: COG0629; Pfam: PF00436; InterPro: IPR011344; single-strand binding protein 1275011 ssb 12366080 ssb Helicobacter pylori 83 single-strand binding protein YP_005785827.1 1274466 R 585538 CDS YP_005785828.1 385225903 12366081 complement(1275021..1275497) 1 NC_017375.1 COG: COG0360; Pfam: PF01250; InterPro: IPR014717; 30S ribosomal protein S6 1275497 rpsF 12366081 rpsF Helicobacter pylori 83 30S ribosomal protein S6 YP_005785828.1 1275021 R 585538 CDS YP_005785829.1 385225904 12366082 complement(1275592..1276614) 1 NC_017375.1 COG: COG1466; Pfam: PF06144; DNA polymerase III subunit delta 1276614 12366082 HMPREF0462_1263 Helicobacter pylori 83 DNA polymerase III subunit delta YP_005785829.1 1275592 R 585538 CDS YP_005785830.1 385225905 12366083 complement(1276604..1278538) 1 NC_017375.1 COG: COG0557; Pfam: PF00773; InterPro: IPR004476; 3'-5' exoribonuclease R 1278538 12366083 HMPREF0462_1264 Helicobacter pylori 83 3'-5' exoribonuclease R YP_005785830.1 1276604 R 585538 CDS YP_005785831.1 385225906 12366084 complement(1278538..1279329) 1 NC_017375.1 COG: COG0169; Pfam: PF08501,PF01488; InterPro: IPR011342; shikimate dehydrogenase 1279329 aroE 12366084 aroE Helicobacter pylori 83 shikimate dehydrogenase YP_005785831.1 1278538 R 585538 CDS YP_005785832.1 385225907 12366085 complement(1279337..1279924) 1 NC_017375.1 Pfam: PF08239; InterPro: IPR003646; bacterial SH3 domain protein 1279924 12366085 HMPREF0462_1266 Helicobacter pylori 83 bacterial SH3 domain protein YP_005785832.1 1279337 R 585538 CDS YP_005785833.1 385225908 12366086 complement(1279933..1280979) 1 NC_017375.1 COG: COG4174; Pfam: PF00528; InterPro: IPR000515; oligopeptide/dipeptide ABC superfamily ATP binding cassette transporter, permease protein 1280979 yejB 12366086 yejB Helicobacter pylori 83 oligopeptide/dipeptide ABC superfamily ATP binding cassette transporter, permease protein YP_005785833.1 1279933 R 585538 CDS YP_005785834.1 385225909 12366087 complement(1280976..1282757) 1 NC_017375.1 COG: COG4166; Pfam: PF00496; InterPro: IPR000914; oligopeptide ABC superfamily ATP binding cassette transporter, binding protein 1282757 oppA 12366087 oppA Helicobacter pylori 83 oligopeptide ABC superfamily ATP binding cassette transporter, binding protein YP_005785834.1 1280976 R 585538 CDS YP_005785835.1 385225910 12366088 complement(1282758..1283738) 1 NC_017375.1 COG: COG0180; Pfam: PF00579; InterPro: IPR002306; tryptophan--tRNA ligase 1283738 trpS 12366088 trpS Helicobacter pylori 83 tryptophan--tRNA ligase YP_005785835.1 1282758 R 585538 CDS YP_005785836.1 385225911 12366089 complement(1283810..1284571) 1 NC_017375.1 COG: COG0500; Pfam: PF08241; InterPro: IPR011814; biotin biosynthesis protein BioC 1284571 bioC 12366089 bioC Helicobacter pylori 83 biotin biosynthesis protein BioC YP_005785836.1 1283810 R 585538 CDS YP_005785837.1 385225912 12366090 1284672..1285307 1 NC_017375.1 COG: COG1314; Pfam: PF03840; InterPro: IPR004692; preprotein translocase subunit SecG 1285307 secG 12366090 secG Helicobacter pylori 83 preprotein translocase subunit SecG YP_005785837.1 1284672 D 585538 CDS YP_005785838.1 385225913 12366091 1285307..1285864 1 NC_017375.1 COG: COG0233; Pfam: PF01765; InterPro: IPR015998; ribosome recycling factor 1285864 frr 12366091 frr Helicobacter pylori 83 ribosome recycling factor YP_005785838.1 1285307 D 585538 CDS YP_005785839.1 385225914 12366092 1285868..1286473 1 NC_017375.1 COG: COG0461; Pfam: PF00156; InterPro: IPR006273; orotate phosphoribosyltransferase 1286473 pyrE 12366092 pyrE Helicobacter pylori 83 orotate phosphoribosyltransferase YP_005785839.1 1285868 D 585538 CDS YP_005785840.1 385225915 12366093 1286463..1286927 1 NC_017375.1 COG: COG1714; Pfam: PF06271; InterPro: IPR010432; conserved hypothetical mitochondrial protein family protein 4; hypothetical protein 1286927 12366093 HMPREF0462_1274 Helicobacter pylori 83 hypothetical protein YP_005785840.1 1286463 D 585538 CDS YP_005785841.1 385225916 12366094 1286924..1287613 1 NC_017375.1 COG: COG0846; Pfam: PF02146; InterPro: IPR003000; NAD-dependent deacetylase 1287613 12366094 HMPREF0462_1275 Helicobacter pylori 83 NAD-dependent deacetylase YP_005785841.1 1286924 D 585538 CDS YP_005785842.1 385225917 12366095 1287721..1288122 1 NC_017375.1 COG: COG0838; Pfam: PF00507; InterPro: IPR000440; NADH-quinone oxidoreductase subunit A 1288122 nuoA 12366095 nuoA Helicobacter pylori 83 NADH-quinone oxidoreductase subunit A YP_005785842.1 1287721 D 585538 CDS YP_005785843.1 385225918 12366096 1288122..1288601 1 NC_017375.1 COG: COG0377; Pfam: PF01058; InterPro: IPR014406; NADH-quinone oxidoreductase subunit B 1288601 nuoB 12366096 nuoB Helicobacter pylori 83 NADH-quinone oxidoreductase subunit B YP_005785843.1 1288122 D 585538 CDS YP_005785844.1 385225919 12366097 1288601..1289398 1 NC_017375.1 COG: COG0852; Pfam: PF00329; InterPro: IPR010218; NADH-quinone oxidoreductase subunit C/D 1289398 nuoC 12366097 nuoC Helicobacter pylori 83 NADH-quinone oxidoreductase subunit C/D YP_005785844.1 1288601 D 585538 CDS YP_005785845.1 385225920 12366098 1289400..1290629 1 NC_017375.1 COG: COG0649; Pfam: PF00346; InterPro: IPR010219; NADH-quinone oxidoreductase subunit C/D 1290629 nuoD 12366098 nuoD Helicobacter pylori 83 NADH-quinone oxidoreductase subunit C/D YP_005785845.1 1289400 D 585538 CDS YP_005785846.1 385225921 12366099 1290626..1290856 1 NC_017375.1 NADH-quinone oxidoreductase subunit E 1290856 nuoE 12366099 nuoE Helicobacter pylori 83 NADH-quinone oxidoreductase subunit E YP_005785846.1 1290626 D 585538 CDS YP_005785847.1 385225922 12366100 1290859..1291845 1 NC_017375.1 NADH-quinone oxidoreductase subunit F 1291845 nuoF 12366100 nuoF Helicobacter pylori 83 NADH-quinone oxidoreductase subunit F YP_005785847.1 1290859 D 585538 CDS YP_005785848.1 385225923 12366101 1291842..1294376 1 NC_017375.1 COG: COG1034; Pfam: PF00111,PF00037; InterPro: IPR001041; NADH-ubiquinone oxidoreductase 1294376 nqo 12366101 nqo Helicobacter pylori 83 NADH-ubiquinone oxidoreductase YP_005785848.1 1291842 D 585538 CDS YP_005785849.1 385225924 12366102 1294373..1295362 1 NC_017375.1 COG: COG1005; Pfam: PF00146; InterPro: IPR001694; NADH-quinone oxidoreductase subunit H 1295362 nuoH 12366102 nuoH Helicobacter pylori 83 NADH-quinone oxidoreductase subunit H YP_005785849.1 1294373 D 585538 CDS YP_005785850.1 385225925 12366103 1295373..1296035 1 NC_017375.1 COG: COG1143; Pfam: PF00037; InterPro: IPR010226; NADH-quinone oxidoreductase subunit I 1296035 nuoI 12366103 nuoI Helicobacter pylori 83 NADH-quinone oxidoreductase subunit I YP_005785850.1 1295373 D 585538 CDS YP_005785851.1 385225926 12366104 1296022..1296576 1 NC_017375.1 COG: COG0839; Pfam: PF00499; InterPro: IPR001457; NADH-ubiquinone oxidoreductase 1296576 nqo2 12366104 nqo2 Helicobacter pylori 83 NADH-ubiquinone oxidoreductase YP_005785851.1 1296022 D 585538 CDS YP_005785852.1 385225927 12366105 1296573..1296875 1 NC_017375.1 COG: COG0713; Pfam: PF00420; InterPro: IPR001133; NADH-quinone oxidoreductase subunit K 1296875 nuoK 12366105 nuoK Helicobacter pylori 83 NADH-quinone oxidoreductase subunit K YP_005785852.1 1296573 D 585538 CDS YP_005785853.1 385225928 12366106 1296878..1298716 1 NC_017375.1 COG: COG1009; Pfam: PF00662,PF00361,PF06455; InterPro: IPR003945; NADH-quinone oxidoreductase subunit L 1298716 nuoL 12366106 nuoL Helicobacter pylori 83 NADH-quinone oxidoreductase subunit L YP_005785853.1 1296878 D 585538 CDS YP_005785854.1 385225929 12366107 1298720..1300258 1 NC_017375.1 COG: COG1008; Pfam: PF00361; InterPro: IPR010227; NADH-quinone oxidoreductase subunit M 1300258 nuoM 12366107 nuoM Helicobacter pylori 83 NADH-quinone oxidoreductase subunit M YP_005785854.1 1298720 D 585538 CDS YP_005785855.1 385225930 12366108 1300245..1301717 1 NC_017375.1 COG: COG1007; Pfam: PF00361; InterPro: IPR010096; NADH-ubiquinone oxidoreductase 1301717 nqo3 12366108 nqo3 Helicobacter pylori 83 NADH-ubiquinone oxidoreductase YP_005785855.1 1300245 D 585538 CDS YP_005785856.1 385225931 12366109 1301707..1304118 1 NC_017375.1 Pfam: PF07719; paralysed flagella protein 1304118 pflA 12366109 pflA Helicobacter pylori 83 paralysed flagella protein YP_005785856.1 1301707 D 585538 CDS YP_005785857.1 385225932 12366110 1304120..1305496 1 NC_017375.1 COG: COG1109; Pfam: PF02878,PF02879,PF02880,PF00408; InterPro: IPR016055; phosphomannomutase 1305496 algC 12366110 algC Helicobacter pylori 83 phosphomannomutase YP_005785857.1 1304120 D 585538 CDS YP_005785858.1 385225933 12366111 1305607..1305774 1 NC_017375.1 hypothetical protein 1305774 12366111 HMPREF0462_1292 Helicobacter pylori 83 hypothetical protein YP_005785858.1 1305607 D 585538 CDS YP_005785859.1 385225934 12366112 complement(1306210..1306998) 1 NC_017375.1 COG: COG0159; Pfam: PF00290; InterPro: IPR013785; tryptophan synthase subunit alpha 1306998 trpA 12366112 trpA Helicobacter pylori 83 tryptophan synthase subunit alpha YP_005785859.1 1306210 R 585538 CDS YP_005785860.1 385225935 12366113 complement(1307000..1308175) 1 NC_017375.1 COG: COG0133; Pfam: PF00291; InterPro: IPR006654; tryptophan synthase subunit beta 1308175 trpB 12366113 trpB Helicobacter pylori 83 tryptophan synthase subunit beta YP_005785860.1 1307000 R 585538 CDS YP_005785861.1 385225936 12366114 complement(1308177..1309535) 1 NC_017375.1 COG: COG0134; Pfam: PF00218,PF00697; InterPro: IPR013785; Indole-3-glycerol phosphate synthase 1309535 trpC2 12366114 trpC2 Helicobacter pylori 83 Indole-3-glycerol phosphate synthase YP_005785861.1 1308177 R 585538 CDS YP_005785862.1 385225937 12366115 complement(1309528..1310538) 1 NC_017375.1 COG: COG0547; Pfam: PF02885,PF00591; InterPro: IPR005940; anthranilate phosphoribosyltransferase 1310538 trpD 12366115 trpD Helicobacter pylori 83 anthranilate phosphoribosyltransferase YP_005785862.1 1309528 R 585538 CDS YP_005785863.1 385225938 12366116 complement(1310535..1311116) 1 NC_017375.1 COG: COG0512; Pfam: PF00117; InterPro: IPR006221; anthranilate synthase component II 1311116 trpG 12366116 trpG Helicobacter pylori 83 anthranilate synthase component II YP_005785863.1 1310535 R 585538 CDS YP_005785864.1 385225939 12366117 complement(1311113..1312615) 1 NC_017375.1 COG: COG0147; Pfam: PF04715,PF00425; InterPro: IPR005801; anthranilate synthase component I TrpE 1312615 trpE 12366117 trpE Helicobacter pylori 83 anthranilate synthase component I TrpE YP_005785864.1 1311113 R 585538 CDS YP_005785865.1 385225940 12366118 complement(1312848..1313906) 1 NC_017375.1 COG: COG0859; heptosyltransferase III 1313906 12366118 HMPREF0462_1299 Helicobacter pylori 83 heptosyltransferase III YP_005785865.1 1312848 R 585538 CDS YP_005785866.1 385225941 12366119 complement(1313973..1314710) 1 NC_017375.1 COG: COG2503; Pfam: PF03767; InterPro: IPR006423; acid phosphatase lipoprotein 1314710 12366119 HMPREF0462_1300 Helicobacter pylori 83 acid phosphatase lipoprotein YP_005785866.1 1313973 R 585538 CDS YP_005785867.1 385225942 12366120 1314833..1315381 1 NC_017375.1 COG: COG2353; Pfam: PF04264; InterPro: IPR007372; hypothetical protein 1315381 12366120 HMPREF0462_1301 Helicobacter pylori 83 hypothetical protein YP_005785867.1 1314833 D 585538 CDS YP_005785868.1 385225943 12366121 1316105..1316626 1 NC_017375.1 COG: COG0819; Pfam: PF03070; InterPro: IPR004305; TENA/THI-4 family protein 1316626 tenA 12366121 tenA Helicobacter pylori 83 TENA/THI-4 family protein YP_005785868.1 1316105 D 585538 CDS YP_005785869.1 385225944 12366122 1316748..1317410 1 NC_017375.1 COG: COG3201; Pfam: PF04973; InterPro: IPR006419; nicotinamide mononucleotide transporter 1317410 pnuC 12366122 pnuC Helicobacter pylori 83 nicotinamide mononucleotide transporter YP_005785869.1 1316748 D 585538 CDS YP_005785870.1 385225945 12366123 1317398..1318012 1 NC_017375.1 COG: COG1564; Pfam: PF04263; InterPro: IPR006282; thiamine diphosphokinase 1318012 12366123 HMPREF0462_1304 Helicobacter pylori 83 thiamine diphosphokinase YP_005785870.1 1317398 D 585538 CDS YP_005785871.1 385225946 12366124 complement(1318516..1318866) 1 NC_017375.1 COG: COG0203; Pfam: PF01196; InterPro: IPR000456; 50S ribosomal protein L17 1318866 rplQ 12366124 rplQ Helicobacter pylori 83 50S ribosomal protein L17 YP_005785871.1 1318516 R 585538 CDS YP_005785872.1 385225947 12366125 complement(1318866..1319900) 1 NC_017375.1 COG: COG0202; Pfam: PF01193,PF01000,PF03118; InterPro: IPR011773; DNA-directed RNA polymerase subunit alpha 1319900 rpoA 12366125 rpoA Helicobacter pylori 83 DNA-directed RNA polymerase subunit alpha YP_005785872.1 1318866 R 585538 CDS YP_005785873.1 385225948 12366126 complement(1319912..1320538) 1 NC_017375.1 COG: COG0522; Pfam: PF00163,PF01479; InterPro: IPR005709; 30S ribosomal protein S4 1320538 rpsD 12366126 rpsD Helicobacter pylori 83 30S ribosomal protein S4 YP_005785873.1 1319912 R 585538 CDS YP_005785874.1 385225949 12366127 complement(1320548..1320943) 1 NC_017375.1 COG: COG0100; Pfam: PF00411; InterPro: IPR001971; 30S ribosomal protein S11 1320943 rpsK 12366127 rpsK Helicobacter pylori 83 30S ribosomal protein S11 YP_005785874.1 1320548 R 585538 CDS YP_005785875.1 385225950 12366128 complement(1320966..1321328) 1 NC_017375.1 COG: COG0099; Pfam: PF00416; InterPro: IPR001892; 30S ribosomal protein S13 1321328 rpsM 12366128 rpsM Helicobacter pylori 83 30S ribosomal protein S13 YP_005785875.1 1320966 R 585538 CDS YP_005785876.1 385225951 12366129 complement(1321524..1321742) 1 NC_017375.1 COG: COG0361; Pfam: PF01176; InterPro: IPR012340; translation initiation factor IF-1 1321742 infA 12366129 infA Helicobacter pylori 83 translation initiation factor IF-1 YP_005785876.1 1321524 R 585538 CDS YP_005785877.1 385225952 12366130 complement(1321742..1322503) 1 NC_017375.1 COG: COG0024; Pfam: PF00557; InterPro: IPR002467; methionine aminopeptidase 1322503 map 12366130 map Helicobacter pylori 83 methionine aminopeptidase YP_005785877.1 1321742 R 585538 CDS YP_005785878.1 385225953 12366131 complement(1322503..1323765) 1 NC_017375.1 COG: COG0201; Pfam: PF00344; InterPro: IPR002208; preprotein translocase subunit SecY 1323765 secY 12366131 secY Helicobacter pylori 83 preprotein translocase subunit SecY YP_005785878.1 1322503 R 585538 CDS YP_005785879.1 385225954 12366132 complement(1323803..1324210) 1 NC_017375.1 COG: COG0200; Pfam: PF01305; InterPro: IPR005749; 50S ribosomal protein L15 1324210 rplO 12366132 rplO Helicobacter pylori 83 50S ribosomal protein L15 YP_005785879.1 1323803 R 585538 CDS YP_005785880.1 385225955 12366133 complement(1324222..1324683) 1 NC_017375.1 COG: COG0098; Pfam: PF00333,PF03719; InterPro: IPR000851; 30S ribosomal protein S5 1324683 rpsE 12366133 rpsE Helicobacter pylori 83 30S ribosomal protein S5 YP_005785880.1 1324222 R 585538 CDS YP_005785881.1 385225956 12366134 complement(1324680..1325036) 1 NC_017375.1 COG: COG0256; Pfam: PF00861; InterPro: IPR005484; 50S ribosomal protein L18 1325036 rplR 12366134 rplR Helicobacter pylori 83 50S ribosomal protein L18 YP_005785881.1 1324680 R 585538 CDS YP_005785882.1 385225957 12366135 complement(1325050..1325586) 1 NC_017375.1 COG: COG0097; Pfam: PF00347; InterPro: IPR000702; 50S ribosomal protein L6 1325586 rplF 12366135 rplF Helicobacter pylori 83 50S ribosomal protein L6 YP_005785882.1 1325050 R 585538 CDS YP_005785883.1 385225958 12366136 complement(1325597..1325992) 1 NC_017375.1 COG: COG0096; Pfam: PF00410; InterPro: IPR000630; 30S ribosomal protein S8 1325992 rpsH 12366136 rpsH Helicobacter pylori 83 30S ribosomal protein S8 YP_005785883.1 1325597 R 585538 CDS YP_005785884.1 385225959 12366137 complement(1326002..1326187) 1 NC_017375.1 COG: COG0199; Pfam: PF00253; InterPro: IPR001209; 30S ribosomal protein S14 1326187 rpsN 12366137 rpsN Helicobacter pylori 83 30S ribosomal protein S14 YP_005785884.1 1326002 R 585538 CDS YP_005785885.1 385225960 12366138 complement(1326197..1326742) 1 NC_017375.1 COG: COG0094; Pfam: PF00281,PF00673; InterPro: IPR002132; 50S ribosomal protein L5 1326742 rplE 12366138 rplE Helicobacter pylori 83 50S ribosomal protein L5 YP_005785885.1 1326197 R 585538 CDS YP_005785886.1 385225961 12366139 complement(1326755..1326976) 1 NC_017375.1 COG: COG0198; Pfam: PF00467; InterPro: IPR003256; 50S ribosomal protein L24 1326976 rplX 12366139 rplX Helicobacter pylori 83 50S ribosomal protein L24 YP_005785886.1 1326755 R 585538 CDS YP_005785887.1 385225962 12366140 complement(1326976..1327344) 1 NC_017375.1 COG: COG0093; Pfam: PF00238; InterPro: IPR005745; 50S ribosomal protein L14 1327344 rplN 12366140 rplN Helicobacter pylori 83 50S ribosomal protein L14 YP_005785887.1 1326976 R 585538 CDS YP_005785888.1 385225963 12366141 complement(1327347..1327607) 1 NC_017375.1 COG: COG0186; Pfam: PF00366; InterPro: IPR012340; 30S ribosomal protein S17 1327607 rpsQ 12366141 rpsQ Helicobacter pylori 83 30S ribosomal protein S17 YP_005785888.1 1327347 R 585538 CDS YP_005785889.1 385225964 12366142 complement(1327622..1327822) 1 NC_017375.1 Pfam: PF00831; InterPro: IPR001854; 50S ribosomal protein L29 1327822 rpmC 12366142 rpmC Helicobacter pylori 83 50S ribosomal protein L29 YP_005785889.1 1327622 R 585538 CDS YP_005785890.1 385225965 12366143 complement(1327809..1328234) 1 NC_017375.1 COG: COG0197; Pfam: PF00252; InterPro: IPR000114; 50S ribosomal protein L16 1328234 rplP 12366143 rplP Helicobacter pylori 83 50S ribosomal protein L16 YP_005785890.1 1327809 R 585538 CDS YP_005785891.1 385225966 12366144 complement(1328237..1328941) 1 NC_017375.1 COG: COG0092; Pfam: PF00417,PF07650,PF00189; InterPro: IPR005704; 30S ribosomal protein S3 1328941 rpsC 12366144 rpsC Helicobacter pylori 83 30S ribosomal protein S3 YP_005785891.1 1328237 R 585538 CDS YP_005785892.1 385225967 12366145 complement(1328945..1329313) 1 NC_017375.1 COG: COG0091; Pfam: PF00237; InterPro: IPR001063; 50S ribosomal protein L22 1329313 rplV 12366145 rplV Helicobacter pylori 83 50S ribosomal protein L22 YP_005785892.1 1328945 R 585538 CDS YP_005785893.1 385225968 12366146 complement(1329324..1329605) 1 NC_017375.1 COG: COG0185; Pfam: PF00203; InterPro: IPR002222; 30S ribosomal protein S19 1329605 rpsS 12366146 rpsS Helicobacter pylori 83 30S ribosomal protein S19 YP_005785893.1 1329324 R 585538 CDS YP_005785894.1 385225969 12366147 complement(1329617..1330447) 1 NC_017375.1 COG: COG0090; Pfam: PF00181,PF03947; InterPro: IPR005880; 50S ribosomal protein L2 1330447 rplB 12366147 rplB Helicobacter pylori 83 50S ribosomal protein L2 YP_005785894.1 1329617 R 585538 CDS YP_005785895.1 385225970 12366148 complement(1330463..1330744) 1 NC_017375.1 COG: COG0089; Pfam: PF00276; InterPro: IPR012677; 50S ribosomal protein L23 1330744 rplW 12366148 rplW Helicobacter pylori 83 50S ribosomal protein L23 YP_005785895.1 1330463 R 585538 CDS YP_005785896.1 385225971 12366149 complement(1330748..1331395) 1 NC_017375.1 COG: COG0088; Pfam: PF00573; InterPro: IPR002136; 50S ribosomal protein L4/L1 family protein 1331395 rplD 12366149 rplD Helicobacter pylori 83 50S ribosomal protein L4/L1 family protein YP_005785896.1 1330748 R 585538 CDS YP_005785897.1 385225972 12366150 complement(1331438..1332013) 1 NC_017375.1 COG: COG0087; Pfam: PF00297; InterPro: IPR000597; 50S ribosomal protein L3 1332013 rplC 12366150 rplC Helicobacter pylori 83 50S ribosomal protein L3 YP_005785897.1 1331438 R 585538 CDS YP_005785898.1 385225973 12366151 complement(1332050..1332364) 1 NC_017375.1 COG: COG0051; Pfam: PF00338; InterPro: IPR001848; 30S ribosomal protein S10 1332364 rpsJ 12366151 rpsJ Helicobacter pylori 83 30S ribosomal protein S10 YP_005785898.1 1332050 R 585538 CDS YP_005785899.1 385225974 12366152 1332574..1333656 1 NC_017375.1 ATP-binding protein 1333656 12366152 HMPREF0462_1333 Helicobacter pylori 83 ATP-binding protein YP_005785899.1 1332574 D 585538 CDS YP_005785900.1 385225975 12366153 1333847..1334428 1 NC_017375.1 hypothetical protein 1334428 12366153 HMPREF0462_1334 Helicobacter pylori 83 hypothetical protein YP_005785900.1 1333847 D 585538 CDS YP_005785901.1 385225976 12366154 complement(1334402..1335016) 1 NC_017375.1 COG: COG0164; Pfam: PF01351; InterPro: IPR001352; ribonuclease HII 1335016 rnhB 12366154 rnhB Helicobacter pylori 83 ribonuclease HII YP_005785901.1 1334402 R 585538 CDS YP_005785902.1 385225977 12366155 complement(1335013..1335735) 1 NC_017375.1 hypothetical protein 1335735 12366155 HMPREF0462_1336 Helicobacter pylori 83 hypothetical protein YP_005785902.1 1335013 R 585538 CDS YP_005785903.1 385225978 12366156 complement(1335690..1337645) 1 NC_017375.1 hypothetical protein 1337645 12366156 HMPREF0462_1337 Helicobacter pylori 83 hypothetical protein YP_005785903.1 1335690 R 585538 CDS YP_005785904.1 385225979 12366157 complement(1337649..1339040) 1 NC_017375.1 COG: COG0114; Pfam: PF00206; InterPro: IPR005677; fumarate hydratase 1339040 fumC 12366157 fumC Helicobacter pylori 83 fumarate hydratase YP_005785904.1 1337649 R 585538 CDS YP_005785905.1 385225980 12366158 1339215..1339592 1 NC_017375.1 hypothetical protein 1339592 12366158 HMPREF0462_1339 Helicobacter pylori 83 hypothetical protein YP_005785905.1 1339215 D 585538 CDS YP_005785906.1 385225981 12366159 1339597..1340835 1 NC_017375.1 Pfam: PF02321; InterPro: IPR003423; hypothetical protein 1340835 12366159 HMPREF0462_1340 Helicobacter pylori 83 hypothetical protein YP_005785906.1 1339597 D 585538 CDS YP_005785907.1 385225982 12366160 1340832..1341839 1 NC_017375.1 COG: COG0845; InterPro: IPR006143; cation efflux system protein 1341839 czcA2 12366160 czcA2 Helicobacter pylori 83 cation efflux system protein YP_005785907.1 1340832 D 585538 CDS YP_005785908.1 385225983 12366161 1341840..1344953 1 NC_017375.1 COG: COG3696; Pfam: PF00873; InterPro: IPR004763; cation efflux system protein 1344953 czcA3 12366161 czcA3 Helicobacter pylori 83 cation efflux system protein YP_005785908.1 1341840 D 585538 CDS YP_005785909.1 385225984 12366162 complement(1344950..1345297) 1 NC_017375.1 COG: COG1687; Pfam: PF05437; InterPro: IPR008407; branched-chain amino acid transporter 1345297 12366162 HMPREF0462_1343 Helicobacter pylori 83 branched-chain amino acid transporter YP_005785909.1 1344950 R 585538 CDS YP_005785910.1 385225985 12366163 complement(1345291..1345977) 1 NC_017375.1 COG: COG1296; Pfam: PF03591; InterPro: IPR004471; azaleucine resistance protein AzlC 1345977 azlC 12366163 azlC Helicobacter pylori 83 azaleucine resistance protein AzlC YP_005785910.1 1345291 R 585538 CDS YP_005785911.1 385225986 12366164 complement(1345988..1347097) 1 NC_017375.1 COG: COG0484; Pfam: PF00226,PF00684,PF01556; InterPro: IPR012724; chaperone DnaJ 1347097 dnaJ2 12366164 dnaJ2 Helicobacter pylori 83 chaperone DnaJ YP_005785911.1 1345988 R 585538 CDS YP_005785912.1 385225987 12366165 1347221..1348351 1 NC_017375.1 hypothetical protein 1348351 12366165 HMPREF0462_1346 Helicobacter pylori 83 hypothetical protein YP_005785912.1 1347221 D 585538 CDS YP_005785913.1 385225988 12366166 1348881..1349129 1 NC_017375.1 hypothetical protein 1349129 12366166 HMPREF0462_1347 Helicobacter pylori 83 hypothetical protein YP_005785913.1 1348881 D 585538 CDS YP_005785914.1 385225989 12366167 complement(1349307..1350368) 1 NC_017375.1 COG: COG0482; Pfam: PF03054; InterPro: IPR004506; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 1350368 trmU2 12366167 trmU2 Helicobacter pylori 83 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_005785914.1 1349307 R 585538 CDS YP_005785915.1 385225990 12366168 1350415..1351236 1 NC_017375.1 Pfam: PF00226; hypothetical protein 1351236 12366168 HMPREF0462_1349 Helicobacter pylori 83 hypothetical protein YP_005785915.1 1350415 D 585538 CDS YP_005785916.1 385225991 12366169 complement(1351233..1351757) 1 NC_017375.1 COG: COG1057; Pfam: PF01467; InterPro: IPR005248; nicotinate-nucleotide adenylyltransferase 1351757 nadD 12366169 nadD Helicobacter pylori 83 nicotinate-nucleotide adenylyltransferase YP_005785916.1 1351233 R 585538 CDS YP_005785917.1 385225992 12366170 complement(1351741..1352187) 1 NC_017375.1 COG: COG0864; Pfam: PF01402,PF08753; InterPro: IPR014864; CopG family transcriptional regulator 1352187 nikR 12366170 nikR Helicobacter pylori 83 CopG family transcriptional regulator YP_005785917.1 1351741 R 585538 CDS YP_005785918.1 385225993 12366171 1352507..1352944 1 NC_017375.1 COG: COG0811; Pfam: PF01618; InterPro: IPR014172; TonB-system energizer ExbB 1352944 exbB2 12366171 exbB2 Helicobacter pylori 83 TonB-system energizer ExbB YP_005785918.1 1352507 D 585538 CDS YP_005785919.1 385225994 12366172 1352941..1353330 1 NC_017375.1 COG: COG0848; Pfam: PF02472; InterPro: IPR003400; TonB system transporter ExbD 1353330 expD 12366172 expD Helicobacter pylori 83 TonB system transporter ExbD YP_005785919.1 1352941 D 585538 CDS YP_005785920.1 385225995 12366173 1353296..1354159 1 NC_017375.1 COG: COG0810; Pfam: PF03544; InterPro: IPR006260; siderophore-mediated iron transport protein TonB 1354159 12366173 HMPREF0462_1354 Helicobacter pylori 83 siderophore-mediated iron transport protein TonB YP_005785920.1 1353296 D 585538 CDS YP_005785921.1 385225996 12366174 1354287..1354625 1 NC_017375.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 1354625 dpnA 12366174 dpnA Helicobacter pylori 83 DNA (cytosine-5-)-methyltransferase YP_005785921.1 1354287 D 585538 CDS YP_005785922.1 385225997 12366175 1354677..1355669 1 NC_017375.1 COG: COG2957; Pfam: PF04371; InterPro: IPR007466; agmatine deiminase 1355669 aguA 12366175 aguA Helicobacter pylori 83 agmatine deiminase YP_005785922.1 1354677 D 585538 CDS YP_005785923.1 385225998 12366176 1355666..1357918 1 NC_017375.1 COG: COG0068; Pfam: PF00708,PF07503,PF01300; InterPro: IPR004421; hydrogenase maturation protein HypF 1357918 hypF 12366176 hypF Helicobacter pylori 83 hydrogenase maturation protein HypF YP_005785923.1 1355666 D 585538 CDS YP_005785924.1 385225999 12366177 1357921..1358919 1 NC_017375.1 COG: COG0309; Pfam: PF00586,PF02769; InterPro: IPR011854; hydrogenase expression/formation protein HypE 1358919 hypE 12366177 hypE Helicobacter pylori 83 hydrogenase expression/formation protein HypE YP_005785924.1 1357921 D 585538 CDS YP_005785925.1 385226000 12366178 complement(1359169..1360101) 1 NC_017375.1 COG: COG0451; Pfam: PF01370; InterPro: IPR001509; GDP-L-fucose synthase 1360101 fcl 12366178 fcl Helicobacter pylori 83 GDP-L-fucose synthase YP_005785925.1 1359169 R 585538 CDS YP_005785926.1 385226001 12366179 complement(1360094..1361287) 1 NC_017375.1 COG: COG1089; Pfam: PF01370; InterPro: IPR006368; GDP-mannose 4,6-dehydratase 1361287 gmd 12366179 gmd Helicobacter pylori 83 GDP-mannose 4,6-dehydratase YP_005785926.1 1360094 R 585538 CDS YP_005785927.1 385226002 12366180 complement(1361253..1362665) 1 NC_017375.1 COG: COG0836; Pfam: PF00483,PF01050; InterPro: IPR006375; mannose-6-phosphate isomerase 1362665 pmi 12366180 pmi Helicobacter pylori 83 mannose-6-phosphate isomerase YP_005785927.1 1361253 R 585538 CDS YP_005785928.1 385226003 12366181 complement(1362736..1363872) 1 NC_017375.1 COG: COG2948; Pfam: PF03743; InterPro: IPR005498; competence factor transporter ComB 1363872 comB3 12366181 comB3 Helicobacter pylori 83 competence factor transporter ComB YP_005785928.1 1362736 R 585538 CDS YP_005785929.1 385226004 12366182 complement(1363865..1364833) 1 NC_017375.1 COG: COG3504; Pfam: PF03524; competence factor transporter ComB 1364833 comB4 12366182 comB4 Helicobacter pylori 83 competence factor transporter ComB YP_005785929.1 1363865 R 585538 CDS YP_005785930.1 385226005 12366183 complement(1364833..1365576) 1 NC_017375.1 COG: COG3736; Pfam: PF04335; InterPro: IPR007430; competence factor transporter ComB 1365576 comB5 12366183 comB5 Helicobacter pylori 83 competence factor transporter ComB YP_005785930.1 1364833 R 585538 CDS YP_005785931.1 385226006 12366184 complement(1365714..1366769) 1 NC_017375.1 NADH-ubiquinone oxidoreductase subunit 1366769 12366184 HMPREF0462_1365 Helicobacter pylori 83 NADH-ubiquinone oxidoreductase subunit YP_005785931.1 1365714 R 585538 CDS YP_005785932.1 385226007 12366185 complement(1366777..1367772) 1 NC_017375.1 hypothetical protein 1367772 12366185 HMPREF0462_1366 Helicobacter pylori 83 hypothetical protein YP_005785932.1 1366777 R 585538 CDS YP_005785933.1 385226008 12366186 complement(1367772..1368065) 1 NC_017375.1 COG: COG0718; Pfam: PF02575; InterPro: IPR004401; hypothetical protein 1368065 12366186 HMPREF0462_1367 Helicobacter pylori 83 hypothetical protein YP_005785933.1 1367772 R 585538 CDS YP_005785934.1 385226009 12366187 complement(1368076..1368426) 1 NC_017375.1 COG: COG0853; Pfam: PF02261; InterPro: IPR003190; aspartate 1-decarboxylase 1368426 panD 12366187 panD Helicobacter pylori 83 aspartate 1-decarboxylase YP_005785934.1 1368076 R 585538 CDS YP_005785935.1 385226010 12366188 complement(1368416..1370638) 1 NC_017375.1 COG: COG0542; Pfam: PF02861,PF00004,PF07724; InterPro: IPR003593; ATP-dependent C1p protease 1370638 clpA 12366188 clpA Helicobacter pylori 83 ATP-dependent C1p protease YP_005785935.1 1368416 R 585538 CDS YP_005785936.1 385226011 12366189 complement(1370638..1370931) 1 NC_017375.1 COG: COG2127; Pfam: PF02617; InterPro: IPR014719; ATP-dependent Clp protease adaptor protein ClpS 1370931 clpS 12366189 clpS Helicobacter pylori 83 ATP-dependent Clp protease adaptor protein ClpS YP_005785936.1 1370638 R 585538 CDS YP_005785937.1 385226012 12366190 complement(1370933..1371346) 1 NC_017375.1 Pfam: PF00582; InterPro: IPR006016; hypothetical protein 1371346 12366190 HMPREF0462_1371 Helicobacter pylori 83 hypothetical protein YP_005785937.1 1370933 R 585538 CDS YP_005785938.1 385226013 12366191 1371455..1373221 1 NC_017375.1 hypothetical protein 1373221 12366191 HMPREF0462_1372 Helicobacter pylori 83 hypothetical protein YP_005785938.1 1371455 D 585538 CDS YP_005785939.1 385226014 12366192 1373225..1373881 1 NC_017375.1 COG: COG0132; InterPro: IPR004472; dethiobiotin synthetase 1373881 bioD 12366192 bioD Helicobacter pylori 83 dethiobiotin synthetase YP_005785939.1 1373225 D 585538 CDS YP_005785940.1 385226015 12366193 complement(1373858..1374391) 1 NC_017375.1 Pfam: PF07509; InterPro: IPR011088; hypothetical protein 1374391 12366193 HMPREF0462_1374 Helicobacter pylori 83 hypothetical protein YP_005785940.1 1373858 R 585538 CDS YP_005785941.1 385226016 12366194 complement(1374456..1375733) 1 NC_017375.1 COG: COG0538; Pfam: PF00180; InterPro: IPR004439; isocitrate dehydrogenase 1375733 icd 12366194 icd Helicobacter pylori 83 isocitrate dehydrogenase YP_005785941.1 1374456 R 585538 CDS YP_005785942.1 385226017 12366195 1375930..1377210 1 NC_017375.1 COG: COG0372; Pfam: PF00285; InterPro: IPR010953; citrate (Si)-synthase 1377210 gltA 12366195 gltA Helicobacter pylori 83 citrate (Si)-synthase YP_005785942.1 1375930 D 585538 CDS YP_005785943.1 385226018 12366196 complement(1377145..1377399) 1 NC_017375.1 hypothetical protein 1377399 12366196 HMPREF0462_1377 Helicobacter pylori 83 hypothetical protein YP_005785943.1 1377145 R 585538 CDS YP_005785944.1 385226019 12366197 complement(1377640..1377765) 1 NC_017375.1 hypothetical protein 1377765 12366197 HMPREF0462_1378 Helicobacter pylori 83 hypothetical protein YP_005785944.1 1377640 R 585538 CDS YP_005785945.1 385226020 12366198 1377893..1378744 1 NC_017375.1 COG: COG0502; Pfam: PF04055,PF06968; InterPro: IPR013785; biotin synthase 1378744 bioB 12366198 bioB Helicobacter pylori 83 biotin synthase YP_005785945.1 1377893 D 585538 CDS YP_005785946.1 385226021 12366199 1378744..1379610 1 NC_017375.1 COG: COG1295; Pfam: PF03631; InterPro: IPR004664; YihY family protein 1379610 yihY 12366199 yihY Helicobacter pylori 83 YihY family protein YP_005785946.1 1378744 D 585538 CDS YP_005785947.1 385226022 12366200 complement(1379715..1379897) 1 NC_017375.1 hypothetical protein 1379897 12366200 HMPREF0462_1381 Helicobacter pylori 83 hypothetical protein YP_005785947.1 1379715 R 585538 CDS YP_005785948.1 385226023 12366204 complement(1383476..1383640) 1 NC_017375.1 hypothetical protein 1383640 12366204 HMPREF0462_1382 Helicobacter pylori 83 hypothetical protein YP_005785948.1 1383476 R 585538 CDS YP_005785949.1 385226024 12366205 1384260..1386005 1 NC_017375.1 Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein 1386005 12366205 HMPREF0462_1383 Helicobacter pylori 83 hypothetical protein YP_005785949.1 1384260 D 585538 CDS YP_005785950.1 385226025 12366206 1386046..1386435 1 NC_017375.1 COG: COG0608; Pfam: PF01368; hypothetical protein 1386435 12366206 HMPREF0462_1384 Helicobacter pylori 83 hypothetical protein YP_005785950.1 1386046 D 585538 CDS YP_005785951.1 385226026 12366207 1386487..1387299 1 NC_017375.1 COG: COG0608; hypothetical protein 1387299 12366207 HMPREF0462_1385 Helicobacter pylori 83 hypothetical protein YP_005785951.1 1386487 D 585538 CDS YP_005785952.1 385226027 12366208 1387344..1387826 1 NC_017375.1 hypothetical protein 1387826 12366208 HMPREF0462_1386 Helicobacter pylori 83 hypothetical protein YP_005785952.1 1387344 D 585538 CDS YP_005785953.1 385226028 12366209 1388223..1388582 1 NC_017375.1 hypothetical protein 1388582 12366209 HMPREF0462_1387 Helicobacter pylori 83 hypothetical protein YP_005785953.1 1388223 D 585538 CDS YP_005785954.1 385226029 12366211 1388674..1389195 1 NC_017375.1 hypothetical protein 1389195 12366211 HMPREF0462_1388 Helicobacter pylori 83 hypothetical protein YP_005785954.1 1388674 D 585538 CDS YP_005785955.1 385226030 12366213 complement(1389167..1389292) 1 NC_017375.1 hypothetical protein 1389292 12366213 HMPREF0462_1389 Helicobacter pylori 83 hypothetical protein YP_005785955.1 1389167 R 585538 CDS YP_005785956.1 385226031 12366215 1389304..1390224 1 NC_017375.1 hypothetical protein 1390224 12366215 HMPREF0462_1390 Helicobacter pylori 83 hypothetical protein YP_005785956.1 1389304 D 585538 CDS YP_005785957.1 385226032 12366216 complement(1390366..1390806) 1 NC_017375.1 COG: COG0780; Pfam: PF01227; InterPro: IPR001474; preQ(1) synthase 1390806 queF 12366216 queF Helicobacter pylori 83 preQ(1) synthase YP_005785957.1 1390366 R 585538 CDS YP_005785958.1 385226033 12366217 1390865..1391206 1 NC_017375.1 COG: COG0799; Pfam: PF02410; InterPro: IPR004394; iojap family protein 1391206 12366217 HMPREF0462_1392 Helicobacter pylori 83 iojap family protein YP_005785958.1 1390865 D 585538 CDS YP_005785959.1 385226034 12366218 1391277..1392107 1 NC_017375.1 COG: COG0324; Pfam: PF01715; InterPro: IPR002627; tRNA delta(2)-isopentenylpyrophosphate transferase 1392107 miaA 12366218 miaA Helicobacter pylori 83 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005785959.1 1391277 D 585538 CDS YP_005785960.1 385226035 12366219 1392112..1393215 1 NC_017375.1 COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide 1,2-glucosyltransferase 1393215 rfaJ4 12366219 rfaJ4 Helicobacter pylori 83 lipopolysaccharide 1,2-glucosyltransferase YP_005785960.1 1392112 D 585538 CDS YP_005785961.1 385226036 12366220 1393337..1394053 1 NC_017375.1 Pfam: PF00884; hypothetical protein 1394053 12366220 HMPREF0462_1395 Helicobacter pylori 83 hypothetical protein YP_005785961.1 1393337 D 585538 CDS YP_005785962.1 385226037 12366221 1394035..1394886 1 NC_017375.1 COG: COG2194; Pfam: PF00884; InterPro: IPR000917; hypothetical protein 1394886 12366221 HMPREF0462_1396 Helicobacter pylori 83 hypothetical protein YP_005785962.1 1394035 D 585538 CDS YP_005785963.1 385226038 12366222 complement(1394931..1395710) 1 NC_017375.1 COG: COG0812; Pfam: PF02873; InterPro: IPR003170; UDP-N-acetylmuramate dehydrogenase 1395710 murB 12366222 murB Helicobacter pylori 83 UDP-N-acetylmuramate dehydrogenase YP_005785963.1 1394931 R 585538 CDS YP_005785964.1 385226039 12366223 complement(1395714..1395980) 1 NC_017375.1 COG: COG1987; Pfam: PF01313; InterPro: IPR006305; flagellar biosynthetic protein FliQ 1395980 fliQ 12366223 fliQ Helicobacter pylori 83 flagellar biosynthetic protein FliQ YP_005785964.1 1395714 R 585538 CDS YP_005785965.1 385226040 12366224 complement(1395991..1397295) 1 NC_017375.1 COG: COG1157; Pfam: PF00006; InterPro: IPR005714; flagellar protein export ATPase FliI 1397295 fliI 12366224 fliI Helicobacter pylori 83 flagellar protein export ATPase FliI YP_005785965.1 1395991 R 585538 CDS YP_005785966.1 385226041 12366225 complement(1397296..1398210) 1 NC_017375.1 COG: COG0630; Pfam: PF00437; InterPro: IPR001482; conjugative transfer protein TrbB 1398210 trbB 12366225 trbB Helicobacter pylori 83 conjugative transfer protein TrbB YP_005785966.1 1397296 R 585538 CDS YP_005785967.1 385226042 12366226 complement(1398227..1400989) 1 NC_017375.1 COG: COG0060; Pfam: PF00133,PF08264,PF06827; InterPro: IPR002301; isoleucine--tRNA ligase 1400989 ileS 12366226 ileS Helicobacter pylori 83 isoleucine--tRNA ligase YP_005785967.1 1398227 R 585538 CDS YP_005785968.1 385226043 12366227 complement(1401022..1401279) 1 NC_017375.1 COG: COG1188; Pfam: PF01479; InterPro: IPR002942; S4 domain-containing protein 1401279 12366227 HMPREF0462_1402 Helicobacter pylori 83 S4 domain-containing protein YP_005785968.1 1401022 R 585538 CDS YP_005785969.1 385226044 12366228 1401381..1402001 1 NC_017375.1 hypothetical protein 1402001 12366228 HMPREF0462_1403 Helicobacter pylori 83 hypothetical protein YP_005785969.1 1401381 D 585538 CDS YP_005785970.1 385226045 12366229 complement(1402296..1402529) 1 NC_017375.1 hypothetical protein 1402529 12366229 HMPREF0462_1404 Helicobacter pylori 83 hypothetical protein YP_005785970.1 1402296 R 585538 CDS YP_005785971.1 385226046 12366230 complement(1402713..1403786) 1 NC_017375.1 COG: COG0820; Pfam: PF04055; InterPro: IPR004383; cfr family radical SAM enzyme 1403786 12366230 HMPREF0462_1405 Helicobacter pylori 83 cfr family radical SAM enzyme YP_005785971.1 1402713 R 585538 CDS YP_005785972.1 385226047 12366231 complement(1403783..1404766) 1 NC_017375.1 COG: COG0794; Pfam: PF01380,PF00571; InterPro: IPR004800; arabinose-5-phosphate isomerase 1404766 kdsD 12366231 kdsD Helicobacter pylori 83 arabinose-5-phosphate isomerase YP_005785972.1 1403783 R 585538 CDS YP_005785973.1 385226048 12366232 complement(1404756..1406867) 1 NC_017375.1 COG: COG0595; Pfam: PF00753,PF07521; InterPro: IPR004613; ribonuclease J 1406867 12366232 HMPREF0462_1407 Helicobacter pylori 83 ribonuclease J YP_005785973.1 1404756 R 585538 CDS YP_005785974.1 385226049 12366233 complement(1406901..1407716) 1 NC_017375.1 COG: COG0030; Pfam: PF00398; InterPro: IPR001737; dimethyladenosine transferase 1407716 ksgA 12366233 ksgA Helicobacter pylori 83 dimethyladenosine transferase YP_005785974.1 1406901 R 585538 CDS YP_005785975.1 385226050 12366234 complement(1407805..1407933) 1 NC_017375.1 hypothetical protein 1407933 12366234 HMPREF0462_1409 Helicobacter pylori 83 hypothetical protein YP_005785975.1 1407805 R 585538 CDS YP_005785976.1 385226051 12366235 1407970..1408182 1 NC_017375.1 histidine and glutamine-rich protein 1408182 12366235 HMPREF0462_1410 Helicobacter pylori 83 histidine and glutamine-rich protein YP_005785976.1 1407970 D 585538 CDS YP_005785977.1 385226052 12366236 complement(1408809..1409651) 1 NC_017375.1 hypothetical protein 1409651 12366236 HMPREF0462_1411 Helicobacter pylori 83 hypothetical protein YP_005785977.1 1408809 R 585538 CDS YP_005785978.1 385226053 12366237 complement(1409672..1411264) 1 NC_017375.1 hypothetical protein 1411264 12366237 HMPREF0462_1412 Helicobacter pylori 83 hypothetical protein YP_005785978.1 1409672 R 585538 CDS YP_005785979.1 385226054 12366238 complement(1411265..1412152) 1 NC_017375.1 COG: COG0788; Pfam: PF01842,PF00551; InterPro: IPR004810; formyltetrahydrofolate deformylase 1412152 purU 12366238 purU Helicobacter pylori 83 formyltetrahydrofolate deformylase YP_005785979.1 1411265 R 585538 CDS YP_005785980.1 385226055 12366239 complement(1412149..1413027) 1 NC_017375.1 COG: COG0616; Pfam: PF01343; InterPro: IPR004635; signal peptide peptidase SppA 1413027 sppA 12366239 sppA Helicobacter pylori 83 signal peptide peptidase SppA YP_005785980.1 1412149 R 585538 CDS YP_005785981.1 385226056 12366240 1413098..1413346 1 NC_017375.1 hypothetical protein 1413346 12366240 HMPREF0462_1415 Helicobacter pylori 83 hypothetical protein YP_005785981.1 1413098 D 585538 CDS YP_005785982.1 385226057 12366241 1413555..1414136 1 NC_017375.1 hypothetical protein 1414136 12366241 HMPREF0462_1416 Helicobacter pylori 83 hypothetical protein YP_005785982.1 1413555 D 585538 CDS YP_005785983.1 385226058 12366242 1414300..1414785 1 NC_017375.1 hypothetical protein 1414785 12366242 HMPREF0462_1417 Helicobacter pylori 83 hypothetical protein YP_005785983.1 1414300 D 585538 CDS YP_005785984.1 385226059 12366243 1414789..1415163 1 NC_017375.1 hypothetical protein 1415163 12366243 HMPREF0462_1418 Helicobacter pylori 83 hypothetical protein YP_005785984.1 1414789 D 585538 CDS YP_005785985.1 385226060 12366244 complement(1415574..1415924) 1 NC_017375.1 hypothetical protein 1415924 12366244 HMPREF0462_1419 Helicobacter pylori 83 hypothetical protein YP_005785985.1 1415574 R 585538 CDS YP_005785986.1 385226061 12366246 complement(1418143..1418865) 1 NC_017375.1 hypothetical protein 1418865 12366246 HMPREF0462_1420 Helicobacter pylori 83 hypothetical protein YP_005785986.1 1418143 R 585538 CDS YP_005785987.1 385226062 12366247 1419043..1419534 1 NC_017375.1 COG: COG0652; Pfam: PF00160; InterPro: IPR002130; peptidyl-prolyl cis-trans isomerase 1419534 ppiB 12366247 ppiB Helicobacter pylori 83 peptidyl-prolyl cis-trans isomerase YP_005785987.1 1419043 D 585538 CDS YP_005785988.1 385226063 12366248 1419552..1419782 1 NC_017375.1 COG: COG1551; Pfam: PF02599; InterPro: IPR003751; carbon storage regulator 1419782 csrA 12366248 csrA Helicobacter pylori 83 carbon storage regulator YP_005785988.1 1419552 D 585538 CDS YP_005785989.1 385226064 12366249 1419779..1420585 1 NC_017375.1 COG: COG1947; Pfam: PF00288; InterPro: IPR004424; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1420585 ispE 12366249 ispE Helicobacter pylori 83 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase YP_005785989.1 1419779 D 585538 CDS YP_005785990.1 385226065 12366250 1420582..1421040 1 NC_017375.1 COG: COG0691; Pfam: PF01668; InterPro: IPR000037; SsrA-binding protein 1421040 smpB 12366250 smpB Helicobacter pylori 83 SsrA-binding protein YP_005785990.1 1420582 D 585538 CDS YP_005785991.1 385226066 12366251 1421043..1421495 1 NC_017375.1 COG: COG0811; Pfam: PF01618; InterPro: IPR002898; TonB-system energizer ExbB 1421495 exbB3 12366251 exbB3 Helicobacter pylori 83 TonB-system energizer ExbB YP_005785991.1 1421043 D 585538 CDS YP_005785992.1 385226067 12366252 1421506..1421907 1 NC_017375.1 COG: COG0848; Pfam: PF02472; InterPro: IPR003400; biopolymer transporter 1421907 exbD 12366252 exbD Helicobacter pylori 83 biopolymer transporter YP_005785992.1 1421506 D 585538 CDS YP_005785993.1 385226068 12366253 1422073..1422558 1 NC_017375.1 COG: COG0594; Pfam: PF00825; InterPro: IPR014721; ribonuclease P protein component 1422558 rnpA 12366253 rnpA Helicobacter pylori 83 ribonuclease P protein component YP_005785993.1 1422073 D 585538 CDS YP_005785994.1 385226069 12366255 1422545..1422901 1 NC_017375.1 COG: COG0759; Pfam: PF01809; InterPro: IPR002696; hypothetical protein 1422901 12366255 HMPREF0462_1428 Helicobacter pylori 83 hypothetical protein YP_005785994.1 1422545 D 585538 CDS YP_005785995.1 385226070 12366256 1422907..1424547 1 NC_017375.1 COG: COG0706; Pfam: PF02096; InterPro: IPR001708; inner membrane protein OxaA 1424547 oxaA 12366256 oxaA Helicobacter pylori 83 inner membrane protein OxaA YP_005785995.1 1422907 D 585538 CDS YP_005785996.1 385226071 12366257 1424547..1425341 1 NC_017375.1 hypothetical protein 1425341 12366257 HMPREF0462_1430 Helicobacter pylori 83 hypothetical protein YP_005785996.1 1424547 D 585538 CDS YP_005785997.1 385226072 12366258 1425334..1426686 1 NC_017375.1 COG: COG0486; Pfam: PF01926; InterPro: IPR004520; tRNA modification GTPase TrmE 1426686 trmE 12366258 trmE Helicobacter pylori 83 tRNA modification GTPase TrmE YP_005785997.1 1425334 D 585538 CDS YP_005785998.1 385226073 12366259 1426892..1429126 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HomD 1429126 homD2 12366259 homD2 Helicobacter pylori 83 outer membrane protein HomD YP_005785998.1 1426892 D 585538 CDS YP_005785999.1 385226074 12366260 1429215..1429343 1 NC_017375.1 sensor histidine kinase 1429343 12366260 HMPREF0462_1433 Helicobacter pylori 83 sensor histidine kinase YP_005785999.1 1429215 D 585538 CDS YP_005786000.1 385226075 12366261 1429623..1429769 1 NC_017375.1 hypothetical protein 1429769 12366261 HMPREF0462_1434 Helicobacter pylori 83 hypothetical protein YP_005786000.1 1429623 D 585538 CDS YP_005786001.1 385226076 12366262 complement(1429796..1430707) 1 NC_017375.1 hypothetical protein 1430707 12366262 HMPREF0462_1435 Helicobacter pylori 83 hypothetical protein YP_005786001.1 1429796 R 585538 CDS YP_005786002.1 385226077 12366263 complement(1430717..1431058) 1 NC_017375.1 hypothetical protein 1431058 12366263 HMPREF0462_1436 Helicobacter pylori 83 hypothetical protein YP_005786002.1 1430717 R 585538 CDS YP_005786003.1 385226078 12366264 complement(1431065..1431592) 1 NC_017375.1 Pfam: PF02169; InterPro: IPR002217; LPP20 lipoprotein 1431592 12366264 HMPREF0462_1437 Helicobacter pylori 83 LPP20 lipoprotein YP_005786003.1 1431065 R 585538 CDS YP_005786004.1 385226079 12366265 complement(1431616..1432248) 1 NC_017375.1 COG: COG3417; InterPro: IPR014094; hypothetical protein 1432248 12366265 HMPREF0462_1438 Helicobacter pylori 83 hypothetical protein YP_005786004.1 1431616 R 585538 CDS YP_005786005.1 385226080 12366266 complement(1432605..1432919) 1 NC_017375.1 COG: COG0526; Pfam: PF00085; InterPro: IPR012335; thioredoxin 1432919 12366266 HMPREF0462_1439 Helicobacter pylori 83 thioredoxin YP_005786005.1 1432605 R 585538 CDS YP_005786006.1 385226081 12366267 complement(1432974..1433762) 1 NC_017375.1 COG: COG1187; Pfam: PF01479,PF00849; InterPro: IPR000748; RNA pseudouridine synthase 1433762 yciL 12366267 yciL Helicobacter pylori 83 RNA pseudouridine synthase YP_005786006.1 1432974 R 585538 CDS YP_005786007.1 385226082 12366268 complement(1433744..1437409) 1 NC_017375.1 COG: COG0587; Pfam: PF02811,PF07733,PF01336; InterPro: IPR004805; DNA-directed DNA polymerase III subunit alpha 1437409 dnaE 12366268 dnaE Helicobacter pylori 83 DNA-directed DNA polymerase III subunit alpha YP_005786007.1 1433744 R 585538 CDS YP_005786008.1 385226083 12366269 1437527..1438579 1 NC_017375.1 COG: COG1858; Pfam: PF03150; InterPro: IPR004852; cytochrome c551 peroxidase 1438579 ccpA 12366269 ccpA Helicobacter pylori 83 cytochrome c551 peroxidase YP_005786008.1 1437527 D 585538 CDS YP_005786009.1 385226084 12366270 complement(1438971..1439558) 1 NC_017375.1 Pfam: PF03724; InterPro: IPR005184; secreted protein 1439558 12366270 HMPREF0462_1443 Helicobacter pylori 83 secreted protein YP_005786009.1 1438971 R 585538 CDS YP_005786010.1 385226085 12366271 complement(1439577..1440254) 1 NC_017375.1 hypothetical protein 1440254 12366271 HMPREF0462_1444 Helicobacter pylori 83 hypothetical protein YP_005786010.1 1439577 R 585538 CDS YP_005786011.1 385226086 12366272 complement(1440257..1441072) 1 NC_017375.1 Pfam: PF02470; InterPro: IPR003399; ABC superfamily ATP binding cassette transporter substrate binding protein 1441072 12366272 HMPREF0462_1445 Helicobacter pylori 83 ABC superfamily ATP binding cassette transporter substrate binding protein YP_005786011.1 1440257 R 585538 CDS YP_005786012.1 385226087 12366273 complement(1441057..1441845) 1 NC_017375.1 COG: COG1127; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter ABC protein 1441845 12366273 HMPREF0462_1446 Helicobacter pylori 83 ABC superfamily ATP binding cassette transporter ABC protein YP_005786012.1 1441057 R 585538 CDS YP_005786013.1 385226088 12366274 complement(1441842..1442975) 1 NC_017375.1 COG: COG0767; Pfam: PF02405; InterPro: IPR003453; ABC superfamily ATP binding cassette transporter permease 1442975 12366274 HMPREF0462_1447 Helicobacter pylori 83 ABC superfamily ATP binding cassette transporter permease YP_005786013.1 1441842 R 585538 CDS YP_005786014.1 385226089 12366275 1443109..1443804 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1443804 12366275 HMPREF0462_1448 Helicobacter pylori 83 outer membrane protein YP_005786014.1 1443109 D 585538 CDS YP_005786015.1 385226090 12366276 complement(1443809..1444831) 1 NC_017375.1 COG: COG0115; Pfam: PF01063; InterPro: IPR001544; branched-chain-amino-acid transaminase 1444831 ilvE2 12366276 ilvE2 Helicobacter pylori 83 branched-chain-amino-acid transaminase YP_005786015.1 1443809 R 585538 CDS YP_005786016.1 385226091 12366277 complement(1444882..1445628) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1445628 12366277 HMPREF0462_1450 Helicobacter pylori 83 outer membrane protein YP_005786016.1 1444882 R 585538 CDS YP_005786017.1 385226092 12366278 complement(1445743..1448424) 1 NC_017375.1 COG: COG0749; Pfam: PF02739,PF01367,PF00476; InterPro: IPR002298; DNA-directed DNA polymerase I 1448424 polA 12366278 polA Helicobacter pylori 83 DNA-directed DNA polymerase I YP_005786017.1 1445743 R 585538 CDS YP_005786018.1 385226093 12366279 1448717..1448956 1 NC_017375.1 hypothetical protein 1448956 12366279 HMPREF0462_1452 Helicobacter pylori 83 hypothetical protein YP_005786018.1 1448717 D 585538 CDS YP_005786019.1 385226094 12366280 1448953..1449960 1 NC_017375.1 COG: COG3392; Pfam: PF02086; InterPro: IPR012327; modification methylase FokI 1449960 12366280 HMPREF0462_1453 Helicobacter pylori 83 modification methylase FokI YP_005786019.1 1448953 D 585538 CDS YP_005786020.1 385226095 12366281 1449964..1451103 1 NC_017375.1 Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase domain protein 1451103 12366281 HMPREF0462_1454 Helicobacter pylori 83 DNA (cytosine-5-)-methyltransferase domain protein YP_005786020.1 1449964 D 585538 CDS YP_005786021.1 385226096 12366282 1451447..1452625 1 NC_017375.1 hypothetical protein 1452625 12366282 HMPREF0462_1455 Helicobacter pylori 83 hypothetical protein YP_005786021.1 1451447 D 585538 CDS YP_005786022.1 385226097 12366283 complement(1452647..1453222) 1 NC_017375.1 COG: COG1040; Pfam: PF00156; HP1473-transformation associated protein 1453222 12366283 HMPREF0462_1456 Helicobacter pylori 83 HP1473-transformation associated protein YP_005786022.1 1452647 R 585538 CDS YP_005786023.1 385226098 12366284 complement(1453210..1453785) 1 NC_017375.1 COG: COG0125; Pfam: PF02223; InterPro: IPR000062; thymidylate kinase 1453785 tmk 12366284 tmk Helicobacter pylori 83 thymidylate kinase YP_005786023.1 1453210 R 585538 CDS YP_005786024.1 385226099 12366285 complement(1453787..1454275) 1 NC_017375.1 COG: COG0669; Pfam: PF01467; InterPro: IPR001980; pantetheine-phosphate adenylyltransferase 1454275 coaD 12366285 coaD Helicobacter pylori 83 pantetheine-phosphate adenylyltransferase YP_005786024.1 1453787 R 585538 CDS YP_005786025.1 385226100 12366286 complement(1454260..1454823) 1 NC_017375.1 COG: COG0163; Pfam: PF02441; InterPro: IPR003382; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1454823 ubiD 12366286 ubiD Helicobacter pylori 83 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_005786025.1 1454260 R 585538 CDS YP_005786026.1 385226101 12366287 complement(1454833..1455489) 1 NC_017375.1 COG: COG1261; flagellar basal body P-ring biosynthesis protein FlgA 1455489 flgA 12366287 flgA Helicobacter pylori 83 flagellar basal body P-ring biosynthesis protein FlgA YP_005786026.1 1454833 R 585538 CDS YP_005786027.1 385226102 12366288 complement(1455486..1457531) 1 NC_017375.1 COG: COG0210; Pfam: PF00580; InterPro: IPR000212; excision endonuclease subunit UvrD 1457531 uvrD 12366288 uvrD Helicobacter pylori 83 excision endonuclease subunit UvrD YP_005786027.1 1455486 R 585538 CDS YP_005786028.1 385226103 12366289 complement(1457531..1460071) 1 NC_017375.1 COG: COG0457; Pfam: PF00515,PF07719; InterPro: IPR011990; hypothetical protein 1460071 12366289 HMPREF0462_1462 Helicobacter pylori 83 hypothetical protein YP_005786028.1 1457531 R 585538 CDS YP_005786029.1 385226104 12366290 complement(1460081..1461328) 1 NC_017375.1 COG: COG0172; Pfam: PF02403,PF00587; InterPro: IPR002317; serine--tRNA ligase 1461328 serS 12366290 serS Helicobacter pylori 83 serine--tRNA ligase YP_005786029.1 1460081 R 585538 CDS YP_005786030.1 385226105 12366291 complement(1461329..1462126) 1 NC_017375.1 COG: COG0388; InterPro: IPR003010; hypothetical protein 1462126 12366291 HMPREF0462_1464 Helicobacter pylori 83 hypothetical protein YP_005786030.1 1461329 R 585538 CDS YP_005786031.1 385226106 12366292 complement(1462130..1462390) 1 NC_017375.1 InterPro: IPR003761; exodeoxyribonuclease VII small subunit 1462390 xseB 12366292 xseB Helicobacter pylori 83 exodeoxyribonuclease VII small subunit YP_005786031.1 1462130 R 585538 CDS YP_005786032.1 385226107 12366293 complement(1462400..1463140) 1 NC_017375.1 COG: COG2226; Pfam: PF01209; InterPro: IPR004033; ubiquinone/menaquinone biosynthesis methyltransferase 1463140 ubiE 12366293 ubiE Helicobacter pylori 83 ubiquinone/menaquinone biosynthesis methyltransferase YP_005786032.1 1462400 R 585538 CDS YP_005786033.1 385226108 12366294 complement(1463167..1463613) 1 NC_017375.1 COG: COG1981; Pfam: PF03653; InterPro: IPR005265; integral membrane protein 1463613 12366294 HMPREF0462_1467 Helicobacter pylori 83 integral membrane protein YP_005786033.1 1463167 R 585538 CDS YP_005786034.1 385226109 12366295 complement(1463624..1464196) 1 NC_017375.1 COG: COG1739; Pfam: PF01205; InterPro: IPR015796; hypothetical protein 1464196 12366295 HMPREF0462_1468 Helicobacter pylori 83 hypothetical protein YP_005786034.1 1463624 R 585538 CDS YP_005786035.1 385226110 12366296 complement(1464183..1465313) 1 NC_017375.1 COG: COG0842; Pfam: PF01061; hypothetical protein 1465313 12366296 HMPREF0462_1469 Helicobacter pylori 83 hypothetical protein YP_005786035.1 1464183 R 585538 CDS YP_005786036.1 385226111 12366297 complement(1465310..1466407) 1 NC_017375.1 COG: COG0842; hypothetical protein 1466407 12366297 HMPREF0462_1470 Helicobacter pylori 83 hypothetical protein YP_005786036.1 1465310 R 585538 CDS YP_005786037.1 385226112 12366298 complement(1466419..1467408) 1 NC_017375.1 COG: COG0845; Pfam: PF00529; InterPro: IPR006143; hypothetical protein 1467408 12366298 HMPREF0462_1471 Helicobacter pylori 83 hypothetical protein YP_005786037.1 1466419 R 585538 CDS YP_005786038.1 385226113 12366299 complement(1467420..1468952) 1 NC_017375.1 COG: COG1538; Pfam: PF02321; InterPro: IPR003423; lipase family protein 1468952 12366299 HMPREF0462_1472 Helicobacter pylori 83 lipase family protein YP_005786038.1 1467420 R 585538 CDS YP_005786039.1 385226114 12366300 complement(1468949..1470298) 1 NC_017375.1 COG: COG1253; Pfam: PF01595,PF00571,PF03471; InterPro: IPR002550; hypothetical protein 1470298 12366300 HMPREF0462_1473 Helicobacter pylori 83 hypothetical protein YP_005786039.1 1468949 R 585538 CDS YP_005786040.1 385226115 12366301 complement(1470398..1472044) 1 NC_017375.1 COG: COG0306; Pfam: PF01384; InterPro: IPR001204; phosphate permease 1472044 12366301 HMPREF0462_1474 Helicobacter pylori 83 phosphate permease YP_005786040.1 1470398 R 585538 CDS YP_005786041.1 385226116 12366302 1472140..1472409 1 NC_017375.1 COG: COG0694; Pfam: PF01106; InterPro: IPR001075; NifU family protein 1472409 12366302 HMPREF0462_1475 Helicobacter pylori 83 NifU family protein YP_005786041.1 1472140 D 585538 CDS YP_005786042.1 385226117 12366303 1472421..1473032 1 NC_017375.1 hypothetical protein 1473032 12366303 HMPREF0462_1476 Helicobacter pylori 83 hypothetical protein YP_005786042.1 1472421 D 585538 CDS YP_005786043.1 385226118 12366304 1473036..1474379 1 NC_017375.1 COG: COG0769; Pfam: PF08245,PF02875; InterPro: IPR005761; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1474379 murE 12366304 murE Helicobacter pylori 83 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_005786043.1 1473036 D 585538 CDS YP_005786044.1 385226119 12366305 1474383..1475333 1 NC_017375.1 COG: COG0176; Pfam: PF00923; InterPro: IPR004732; transaldolase 1475333 tal 12366305 tal Helicobacter pylori 83 transaldolase YP_005786044.1 1474383 D 585538 CDS YP_005786045.1 385226120 12366306 1475388..1475924 1 NC_017375.1 COG: COG1825; Pfam: PF01386; InterPro: IPR001021; 50S ribosomal protein L25 1475924 rplY 12366306 rplY Helicobacter pylori 83 50S ribosomal protein L25 YP_005786045.1 1475388 D 585538 CDS YP_005786046.1 385226121 12366307 1475934..1476494 1 NC_017375.1 COG: COG0193; Pfam: PF01195; InterPro: IPR001328; aminoacyl-tRNA hydrolase 1476494 pth 12366307 pth Helicobacter pylori 83 aminoacyl-tRNA hydrolase YP_005786046.1 1475934 D 585538 CDS YP_005786047.1 385226122 12366308 1476549..1477616 1 NC_017375.1 COG: COG0795; Pfam: PF03739; InterPro: IPR005495; hypothetical protein 1477616 12366308 HMPREF0462_1481 Helicobacter pylori 83 hypothetical protein YP_005786047.1 1476549 D 585538 CDS YP_005786048.1 385226123 12366309 1477673..1478674 1 NC_017375.1 COG: COG3392; Pfam: PF02086; InterPro: IPR012327; type II methylase 1478674 12366309 HMPREF0462_1482 Helicobacter pylori 83 type II methylase YP_005786048.1 1477673 D 585538 CDS YP_005786049.1 385226124 12366310 1478671..1479201 1 NC_017375.1 COG: COG0338; Pfam: PF02086; DNA adenine methylase 1479201 dam 12366310 dam Helicobacter pylori 83 DNA adenine methylase YP_005786049.1 1478671 D 585538 CDS YP_005786050.1 385226125 12366311 1479207..1479569 1 NC_017375.1 DNA adenine methylase 1479569 dam2 12366311 dam2 Helicobacter pylori 83 DNA adenine methylase YP_005786050.1 1479207 D 585538 CDS YP_005786051.1 385226126 12366312 1479576..1480148 1 NC_017375.1 restriction endonuclease 1480148 12366312 HMPREF0462_1485 Helicobacter pylori 83 restriction endonuclease YP_005786051.1 1479576 D 585538 CDS YP_005786052.1 385226127 12366313 1480409..1481188 1 NC_017375.1 restriction endonuclease 1481188 12366313 HMPREF0462_1486 Helicobacter pylori 83 restriction endonuclease YP_005786052.1 1480409 D 585538 CDS YP_005786053.1 385226128 12366314 complement(1481217..1482368) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1482368 12366314 HMPREF0462_1487 Helicobacter pylori 83 outer membrane protein YP_005786053.1 1481217 R 585538 CDS YP_005786054.1 385226129 12366315 1482545..1483000 1 NC_017375.1 COG: COG3399; Pfam: PF04323; InterPro: IPR007418; hypothetical protein 1483000 12366315 HMPREF0462_1488 Helicobacter pylori 83 hypothetical protein YP_005786054.1 1482545 D 585538 CDS YP_005786055.1 385226130 12366316 complement(1482997..1485375) 1 NC_017375.1 COG: COG2217; Pfam: PF00403,PF00122,PF00702; InterPro: IPR001757; P-ATPase superfamily P-type ATPase copper transporter 1485375 12366316 HMPREF0462_1489 Helicobacter pylori 83 P-ATPase superfamily P-type ATPase copper transporter YP_005786055.1 1482997 R 585538 CDS YP_005786056.1 385226131 12366317 complement(1485401..1486117) 1 NC_017375.1 COG: COG4123; Pfam: PF08242; methyltransferase 1486117 12366317 HMPREF0462_1490 Helicobacter pylori 83 methyltransferase YP_005786056.1 1485401 R 585538 CDS YP_005786057.1 385226132 12366318 complement(1486099..1487133) 1 NC_017375.1 Pfam: PF00383; InterPro: IPR004794; riboflavin biosynthesis protein RibD 1487133 ribD 12366318 ribD Helicobacter pylori 83 riboflavin biosynthesis protein RibD YP_005786057.1 1486099 R 585538 CDS YP_005786058.1 385226133 12366319 complement(1487130..1488356) 1 NC_017375.1 COG: COG0786; Pfam: PF03616; InterPro: IPR004445; ESS family glutamate:sodium (Na+) symporter 1488356 gltS 12366319 gltS Helicobacter pylori 83 ESS family glutamate:sodium (Na+) symporter YP_005786058.1 1487130 R 585538 CDS YP_005786059.1 385226134 12366320 1488443..1489642 1 NC_017375.1 COG: COG1748; Pfam: PF03435; InterPro: IPR005097; saccharopine dehydrogenase 1489642 lys 12366320 lys Helicobacter pylori 83 saccharopine dehydrogenase YP_005786059.1 1488443 D 585538 CDS YP_005786060.1 385226135 12366321 complement(1489652..1491028) 1 NC_017375.1 COG: COG0348; Pfam: PF00037; InterPro: IPR014116; cytochrome c oxidase accessory protein CcoG 1491028 ccoG 12366321 ccoG Helicobacter pylori 83 cytochrome c oxidase accessory protein CcoG YP_005786060.1 1489652 R 585538 CDS YP_005786061.1 385226136 12366322 1491008..1491796 1 NC_017375.1 COG: COG0344; Pfam: PF02660; InterPro: IPR003811; acyl-phosphate glycerol 3-phosphate acyltransferase 1491796 plsY 12366322 plsY Helicobacter pylori 83 acyl-phosphate glycerol 3-phosphate acyltransferase YP_005786061.1 1491008 D 585538 CDS YP_005786062.1 385226137 12366323 1491793..1492146 1 NC_017375.1 Pfam: PF02152; InterPro: IPR006157; dihydroneopterin aldolase 1492146 folB 12366323 folB Helicobacter pylori 83 dihydroneopterin aldolase YP_005786062.1 1491793 D 585538 CDS YP_005786063.1 385226138 12366324 1492130..1492456 1 NC_017375.1 COG: COG1629; FrpB family protein 1492456 12366324 HMPREF0462_1497 Helicobacter pylori 83 FrpB family protein YP_005786063.1 1492130 D 585538 CDS YP_005786064.1 385226139 12366325 1492624..1495215 1 NC_017375.1 COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR000531; iron-regulated outer membrane protein 1495215 frpB3 12366325 frpB3 Helicobacter pylori 83 iron-regulated outer membrane protein YP_005786064.1 1492624 D 585538 CDS YP_005786065.1 385226140 12366326 1495443..1496603 1 NC_017375.1 COG: COG1921; Pfam: PF03841; InterPro: IPR004534; L-seryl-tRNA(Sec) selenium transferase 1496603 selA 12366326 selA Helicobacter pylori 83 L-seryl-tRNA(Sec) selenium transferase YP_005786065.1 1495443 D 585538 CDS YP_005786066.1 385226141 12366327 1496691..1497878 1 NC_017375.1 COG: COG0195; InterPro: IPR010213; transcription termination factor NusA 1497878 nusA 12366327 nusA Helicobacter pylori 83 transcription termination factor NusA YP_005786066.1 1496691 D 585538 CDS YP_005786067.1 385226142 12366328 complement(1498187..1501960) 1 NC_017375.1 COG: COG1002; Pfam: PF07669; type II restriction-modification enzyme 1501960 12366328 HMPREF0462_1501 Helicobacter pylori 83 type II restriction-modification enzyme YP_005786067.1 1498187 R 585538 CDS YP_005786068.1 385226143 12366329 complement(1502086..1502544) 1 NC_017375.1 hypothetical protein 1502544 12366329 HMPREF0462_1502 Helicobacter pylori 83 hypothetical protein YP_005786068.1 1502086 R 585538 CDS YP_005786069.1 385226144 12366330 complement(1502519..1503685) 1 NC_017375.1 hypothetical protein 1503685 12366330 HMPREF0462_1503 Helicobacter pylori 83 hypothetical protein YP_005786069.1 1502519 R 585538 CDS YP_005786070.1 385226145 12366331 complement(1503717..1504001) 1 NC_017375.1 hypothetical protein 1504001 12366331 HMPREF0462_1504 Helicobacter pylori 83 hypothetical protein YP_005786070.1 1503717 R 585538 CDS YP_005786071.1 385226146 12366332 complement(1504086..1504448) 1 NC_017375.1 COG: COG1192; PARA protein 1504448 12366332 HMPREF0462_1505 Helicobacter pylori 83 PARA protein YP_005786071.1 1504086 R 585538 CDS YP_005786072.1 385226147 12366333 complement(1504445..1504741) 1 NC_017375.1 PARA protein 1504741 12366333 HMPREF0462_1506 Helicobacter pylori 83 PARA protein YP_005786072.1 1504445 R 585538 CDS YP_005786073.1 385226148 12366334 complement(1504994..1513411) 1 NC_017375.1 COG: COG4646; Pfam: PF02384,PF04851,PF00271; InterPro: IPR014001; DNA methylase 1513411 12366334 HMPREF0462_1507 Helicobacter pylori 83 DNA methylase YP_005786073.1 1504994 R 585538 CDS YP_005786074.1 385226149 12366335 1513566..1514603 1 NC_017375.1 hypothetical protein 1514603 12366335 HMPREF0462_1508 Helicobacter pylori 83 hypothetical protein YP_005786074.1 1513566 D 585538 CDS YP_005786075.1 385226150 12366336 1514604..1515998 1 NC_017375.1 hypothetical protein 1515998 12366336 HMPREF0462_1509 Helicobacter pylori 83 hypothetical protein YP_005786075.1 1514604 D 585538 CDS YP_005786076.1 385226151 12366337 1516042..1517544 1 NC_017375.1 hypothetical protein 1517544 12366337 HMPREF0462_1510 Helicobacter pylori 83 hypothetical protein YP_005786076.1 1516042 D 585538 CDS YP_005786077.1 385226152 12366338 1517584..1518234 1 NC_017375.1 hypothetical protein 1518234 12366338 HMPREF0462_1511 Helicobacter pylori 83 hypothetical protein YP_005786077.1 1517584 D 585538 CDS YP_005786078.1 385226153 12366339 1518238..1519623 1 NC_017375.1 hypothetical protein 1519623 12366339 HMPREF0462_1512 Helicobacter pylori 83 hypothetical protein YP_005786078.1 1518238 D 585538 CDS YP_005786079.1 385226154 12366340 1519623..1520825 1 NC_017375.1 hypothetical protein 1520825 12366340 HMPREF0462_1513 Helicobacter pylori 83 hypothetical protein YP_005786079.1 1519623 D 585538 CDS YP_005786080.1 385226155 12366341 complement(1520887..1521963) 1 NC_017375.1 COG: COG0582; Pfam: PF00589; InterPro: IPR013762; integrase/recombinase 1521963 xerD2 12366341 xerD2 Helicobacter pylori 83 integrase/recombinase YP_005786080.1 1520887 R 585538 CDS YP_005786081.1 385226156 12366342 complement(1522227..1522604) 1 NC_017375.1 hypothetical protein 1522604 12366342 HMPREF0462_1515 Helicobacter pylori 83 hypothetical protein YP_005786081.1 1522227 R 585538 CDS YP_005786082.1 385226157 12366343 complement(1522640..1523317) 1 NC_017375.1 hypothetical protein 1523317 12366343 HMPREF0462_1516 Helicobacter pylori 83 hypothetical protein YP_005786082.1 1522640 R 585538 CDS YP_005786083.1 385226158 12366344 complement(1523380..1526295) 1 NC_017375.1 COG: COG3587; Pfam: PF04851; type III restriction enzyme R protein 1526295 res 12366344 res Helicobacter pylori 83 type III restriction enzyme R protein YP_005786083.1 1523380 R 585538 CDS YP_005786084.1 385226159 12366345 complement(1526298..1526879) 1 NC_017375.1 COG: COG2189; hypothetical protein 1526879 12366345 HMPREF0462_1518 Helicobacter pylori 83 hypothetical protein YP_005786084.1 1526298 R 585538 CDS YP_005786085.1 385226160 12366346 complement(1526876..1528255) 1 NC_017375.1 COG: COG2189; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 1528255 12366346 HMPREF0462_1519 Helicobacter pylori 83 DNA (cytosine-5-)-methyltransferase YP_005786085.1 1526876 R 585538 CDS YP_005786086.1 385226161 12366347 complement(1528298..1530163) 1 NC_017375.1 COG: COG1200; Pfam: PF00270,PF00271; InterPro: IPR004609; DNA helicase RecG 1530163 recG 12366347 recG Helicobacter pylori 83 DNA helicase RecG YP_005786086.1 1528298 R 585538 CDS YP_005786087.1 385226162 12366348 1530245..1530598 1 NC_017375.1 hypothetical protein 1530598 12366348 HMPREF0462_1521 Helicobacter pylori 83 hypothetical protein YP_005786087.1 1530245 D 585538 CDS YP_005786088.1 385226163 12366349 1530602..1531237 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HorD 1531237 horD2 12366349 horD2 Helicobacter pylori 83 outer membrane protein HorD YP_005786088.1 1530602 D 585538 CDS YP_005786089.1 385226164 12366350 complement(1531234..1531986) 1 NC_017375.1 COG: COG0708; Pfam: PF03372; InterPro: IPR004808; exodeoxyribonuclease III 1531986 xthA 12366350 xthA Helicobacter pylori 83 exodeoxyribonuclease III YP_005786089.1 1531234 R 585538 CDS YP_005786090.1 385226165 12366352 complement(1532164..1533603) 1 NC_017375.1 periplasmic competence protein 1533603 12366352 HMPREF0462_1524 Helicobacter pylori 83 periplasmic competence protein YP_005786090.1 1532164 R 585538 CDS YP_005786091.1 385226166 12366353 complement(1533687..1533830) 1 NC_017375.1 hypothetical protein 1533830 12366353 HMPREF0462_1525 Helicobacter pylori 83 hypothetical protein YP_005786091.1 1533687 R 585538 CDS YP_005786092.1 385226167 12366354 complement(1533823..1535190) 1 NC_017375.1 COG: COG0593; Pfam: PF00308,PF08299; InterPro: IPR001957; DNA-directed DNA replication initiator protein 1535190 dnaA 12366354 dnaA Helicobacter pylori 83 DNA-directed DNA replication initiator protein YP_005786092.1 1533823 R 585538 CDS YP_005786093.1 385226168 12366355 1535342..1535878 1 NC_017375.1 purine nucleoside phosphorylase 1535878 punB 12366355 punB Helicobacter pylori 83 purine nucleoside phosphorylase YP_005786093.1 1535342 D 585538 CDS YP_005786094.1 385226169 12366356 1535925..1536164 1 NC_017375.1 hypothetical protein 1536164 12366356 HMPREF0462_1528 Helicobacter pylori 83 hypothetical protein YP_005786094.1 1535925 D 585538 CDS YP_005786095.1 385226170 12366357 1536165..1537958 1 NC_017375.1 COG: COG0449; Pfam: PF00310,PF01380; InterPro: IPR005855; glutamine-fructose-6-phosphate transaminase 1537958 glmS 12366357 glmS Helicobacter pylori 83 glutamine-fructose-6-phosphate transaminase YP_005786095.1 1536165 D 585538 CDS YP_005786096.1 385226171 12366358 1537909..1538607 1 NC_017375.1 COG: COG1351; Pfam: PF02511; InterPro: IPR003669; thymidylate synthase 1538607 thyX 12366358 thyX Helicobacter pylori 83 thymidylate synthase YP_005786096.1 1537909 D 585538 CDS YP_005786097.1 385226172 12366359 complement(1538950..1539489) 1 NC_017375.1 COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I R-M system specificity subunit 1539489 hsdS_3a 12366359 hsdS_3a Helicobacter pylori 83 type I R-M system specificity subunit YP_005786097.1 1538950 R 585538 CDS YP_005786098.1 385226173 12366360 complement(1539477..1540253) 1 NC_017375.1 hypothetical protein 1540253 12366360 HMPREF0462_1532 Helicobacter pylori 83 hypothetical protein YP_005786098.1 1539477 R 585538 CDS YP_005786099.1 385226174 12366361 complement(1540341..1542803) 1 NC_017375.1 COG: COG0286; Pfam: PF02384; InterPro: IPR004546; type I restriction enzyme M protein 1542803 12366361 HMPREF0462_1533 Helicobacter pylori 83 type I restriction enzyme M protein YP_005786099.1 1540341 R 585538 CDS YP_005786100.1 385226175 12366362 1542873..1545848 1 NC_017375.1 COG: COG0610; Pfam: PF04313,PF04851; InterPro: IPR004473; type I restriction enzyme R protein 1545848 hsdR4 12366362 hsdR4 Helicobacter pylori 83 type I restriction enzyme R protein YP_005786100.1 1542873 D 585538 CDS YP_005786101.1 385226176 12366363 1545848..1546555 1 NC_017375.1 COG: COG1451; Pfam: PF01863; InterPro: IPR002725; phosphonate metabolism protein PhnI 1546555 phnI 12366363 phnI Helicobacter pylori 83 phosphonate metabolism protein PhnI YP_005786101.1 1545848 D 585538 CDS YP_005786102.1 385226177 12366364 complement(1546645..1549227) 1 NC_017375.1 COG: COG4772; Pfam: PF07715,PF00593; InterPro: IPR000531; iron(III) dicitrate transporter 1549227 fecA3 12366364 fecA3 Helicobacter pylori 83 iron(III) dicitrate transporter YP_005786102.1 1546645 R 585538 CDS YP_005786103.1 385226178 12366365 complement(1549294..1549431) 1 NC_017375.1 hypothetical protein 1549431 12366365 HMPREF0462_1537 Helicobacter pylori 83 hypothetical protein YP_005786103.1 1549294 R 585538 CDS YP_005786104.1 385226179 12366366 complement(1549656..1550624) 1 NC_017375.1 COG: COG0010; Pfam: PF00491; InterPro: IPR014033; arginase 1550624 rocF 12366366 rocF Helicobacter pylori 83 arginase YP_005786104.1 1549656 R 585538 CDS YP_005786105.1 385226180 12366367 1550828..1551970 1 NC_017375.1 COG: COG0686; Pfam: PF05222,PF01262; InterPro: IPR007698; alanine dehydrogenase 1551970 ald 12366367 ald Helicobacter pylori 83 alanine dehydrogenase YP_005786105.1 1550828 D 585538 CDS YP_005786106.1 385226181 12366368 1552093..1553847 1 NC_017375.1 Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein 1553847 12366368 HMPREF0462_1540 Helicobacter pylori 83 hypothetical protein YP_005786106.1 1552093 D 585538 CDS YP_005786107.1 385226182 12366369 complement(1553857..1554585) 1 NC_017375.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1554585 12366369 HMPREF0462_1541 Helicobacter pylori 83 outer membrane protein YP_005786107.1 1553857 R 585538 CDS YP_005786108.1 385226183 12366370 1554770..1555624 1 NC_017375.1 COG: COG0061; Pfam: PF01513; InterPro: IPR002504; NAD(+) kinase 1555624 ppnK 12366370 ppnK Helicobacter pylori 83 NAD(+) kinase YP_005786108.1 1554770 D 585538 CDS YP_005786109.1 385226184 12366371 1555637..1557211 1 NC_017375.1 COG: COG0497; Pfam: PF02463; DNA repair protein RecN 1557211 recN 12366371 recN Helicobacter pylori 83 DNA repair protein RecN YP_005786109.1 1555637 D 585538 CDS YP_005786110.1 385226185 12366372 1557208..1558515 1 NC_017375.1 COG: COG1293; Pfam: PF05670; InterPro: IPR008532; fibronectin/fibrinogen-binding protein 1558515 12366372 HMPREF0462_1544 Helicobacter pylori 83 fibronectin/fibrinogen-binding protein YP_005786110.1 1557208 D 585538 CDS YP_005786111.1 385226186 12366373 1558534..1558830 1 NC_017375.1 hypothetical protein 1558830 12366373 HMPREF0462_1545 Helicobacter pylori 83 hypothetical protein YP_005786111.1 1558534 D 585538 CDS YP_005786112.1 385226187 12366374 1559080..1559649 1 NC_017375.1 hypothetical protein 1559649 12366374 HMPREF0462_1546 Helicobacter pylori 83 hypothetical protein YP_005786112.1 1559080 D 585538 CDS YP_005786113.1 385226188 12366375 complement(1559627..1559971) 1 NC_017375.1 hypothetical protein 1559971 12366375 HMPREF0462_1547 Helicobacter pylori 83 hypothetical protein YP_005786113.1 1559627 R 585538 CDS YP_005786114.1 385226189 12366376 complement(1559973..1560443) 1 NC_017375.1 hypothetical protein 1560443 12366376 HMPREF0462_1548 Helicobacter pylori 83 hypothetical protein YP_005786114.1 1559973 R 585538 CDS YP_005786115.1 385226190 12366377 complement(1560882..1561745) 1 NC_017375.1 COG: COG0847; Pfam: PF00929; InterPro: IPR006054; DNA-directed DNA polymerase III subunit epsilon 1561745 dnaQ 12366377 dnaQ Helicobacter pylori 83 DNA-directed DNA polymerase III subunit epsilon YP_005786115.1 1560882 R 585538 CDS YP_005786116.1 385226191 12366378 complement(1561723..1562376) 1 NC_017375.1 COG: COG0036; Pfam: PF00834; InterPro: IPR013785; ribulose-phosphate 3-epimerase 1562376 rpe 12366378 rpe Helicobacter pylori 83 ribulose-phosphate 3-epimerase YP_005786116.1 1561723 R 585538 CDS YP_005786117.1 385226192 12366379 1562447..1563319 1 NC_017375.1 COG: COG0158; Pfam: PF00316; InterPro: IPR000146; fructose-1,6-bisphosphatase 1563319 fbp 12366379 fbp Helicobacter pylori 83 fructose-1,6-bisphosphatase YP_005786117.1 1562447 D 585538 CDS YP_005786118.1 385226193 12366380 1563316..1563522 1 NC_017375.1 hypothetical protein 1563522 12366380 HMPREF0462_1552 Helicobacter pylori 83 hypothetical protein YP_005786118.1 1563316 D 585538 CDS YP_005786119.1 385226194 12366381 1563535..1564431 1 NC_017375.1 type II methylase protein 1564431 12366381 HMPREF0462_1553 Helicobacter pylori 83 type II methylase protein YP_005786119.1 1563535 D 585538 CDS YP_005786120.1 385226195 12366382 1564424..1565137 1 NC_017375.1 hypothetical protein 1565137 12366382 HMPREF0462_1554 Helicobacter pylori 83 hypothetical protein YP_005786120.1 1564424 D 585538 CDS YP_005786121.1 385226196 12366383 complement(1565344..1566600) 1 NC_017375.1 Pfam: PF00145; InterPro: IPR001525; site-specific DNA-methyltransferase 1566600 dcm2 12366383 dcm2 Helicobacter pylori 83 site-specific DNA-methyltransferase YP_005786121.1 1565344 R 585538 CDS YP_005786122.1 385226197 12366384 complement(1566590..1567354) 1 NC_017375.1 hypothetical protein 1567354 12366384 HMPREF0462_1556 Helicobacter pylori 83 hypothetical protein YP_005786122.1 1566590 R 585538 CDS YP_005786123.1 385226198 12366385 complement(1567413..1567688) 1 NC_017375.1 hypothetical protein 1567688 12366385 HMPREF0462_1557 Helicobacter pylori 83 hypothetical protein YP_005786123.1 1567413 R 585538 CDS YP_005786124.1 385226199 12366386 complement(1567726..1568793) 1 NC_017375.1 COG: COG0264; Pfam: PF00627,PF00889; InterPro: IPR001816; elongation factor EF1B 1568793 tsf 12366386 tsf Helicobacter pylori 83 elongation factor EF1B YP_005786124.1 1567726 R 585538 CDS YP_005786125.1 385226200 12366387 complement(1568793..1569671) 1 NC_017375.1 COG: COG0052; Pfam: PF00318; InterPro: IPR005706; 30S ribosomal protein S2 1569671 rpsB 12366387 rpsB Helicobacter pylori 83 30S ribosomal protein S2 YP_005786125.1 1568793 R 585538 CDS YP_005786126.1 385226201 12366388 1569838..1572654 1 NC_017375.1 COG: COG1074; Pfam: PF00580; InterPro: IPR000212; helicase 1572654 12366388 HMPREF0462_1560 Helicobacter pylori 83 helicase YP_005786126.1 1569838 D 585538 CDS YP_005786127.1 385226202 12366389 1572645..1573994 1 NC_017375.1 COG: COG3004; Pfam: PF06965; InterPro: IPR004670; NhaA family sodium:proton (Na+:H+) antiporter 1573994 nhaA 12366389 nhaA Helicobacter pylori 83 NhaA family sodium:proton (Na+:H+) antiporter YP_005786127.1 1572645 D 585538 CDS YP_005786128.1 385226203 12366390 1574042..1574335 1 NC_017375.1 COG: COG1862; Pfam: PF02699; InterPro: IPR003849; preprotein translocase 1574335 yajC 12366390 yajC Helicobacter pylori 83 preprotein translocase YP_005786128.1 1574042 D 585538 CDS YP_005786129.1 385226204 12366391 1574335..1575912 1 NC_017375.1 COG: COG0342; Pfam: PF07549,PF02355; InterPro: IPR005791; protein-export membrane protein SecD 1575912 secD 12366391 secD Helicobacter pylori 83 protein-export membrane protein SecD YP_005786129.1 1574335 D 585538 CDS YP_005786130.1 385226205 12366392 1575921..1576892 1 NC_017375.1 COG: COG0341; Pfam: PF07549,PF02355; InterPro: IPR005665; protein-export membrane protein SecF 1576892 secF 12366392 secF Helicobacter pylori 83 protein-export membrane protein SecF YP_005786130.1 1575921 D 585538 CDS YP_005786131.1 385226206 12366393 1576902..1577240 1 NC_017375.1 hypothetical protein 1577240 12366393 HMPREF0462_1565 Helicobacter pylori 83 hypothetical protein YP_005786131.1 1576902 D 585538 CDS YP_005786132.1 385226207 12366394 1577250..1579235 1 NC_017375.1 COG: COG0495; Pfam: PF00133; InterPro: IPR002302; leucyl-tRNA synthetase 1579235 leuS 12366394 leuS Helicobacter pylori 83 leucyl-tRNA synthetase YP_005786132.1 1577250 D 585538 CDS YP_005786133.1 385226208 12366395 1579304..1579669 1 NC_017375.1 COG: COG0495; InterPro: IPR002302; leucyl-tRNA synthetase 1579669 leuS2 12366395 leuS2 Helicobacter pylori 83 leucyl-tRNA synthetase YP_005786133.1 1579304 D 585538 CDS YP_005786134.1 385226209 12366396 1579666..1580178 1 NC_017375.1 hypothetical protein 1580178 12366396 HMPREF0462_1568 Helicobacter pylori 83 hypothetical protein YP_005786134.1 1579666 D 585538 CDS YP_005786135.1 385226210 12366397 1580168..1581343 1 NC_017375.1 COG: COG0285; Pfam: PF08245; InterPro: IPR001645; tetrahydrofolate synthase 1581343 folC 12366397 folC Helicobacter pylori 83 tetrahydrofolate synthase YP_005786135.1 1580168 D 585538 CDS YP_005786136.1 385226211 12366398 1581343..1582269 1 NC_017375.1 COG: COG0739; Pfam: PF01551; InterPro: IPR002886; ToxR-activated protein 1582269 tagE 12366398 tagE Helicobacter pylori 83 ToxR-activated protein YP_005786136.1 1581343 D 585538 CDS YP_005786137.1 385226212 12366399 1582305..1583213 1 NC_017375.1 COG: COG0739; Pfam: PF01551; InterPro: IPR002886; ToxR-activated protein 1583213 tagE2 12366399 tagE2 Helicobacter pylori 83 ToxR-activated protein YP_005786137.1 1582305 D 585538 CDS YP_005786138.1 385226213 12366400 1583132..1583542 1 NC_017375.1 COG: COG1664; Pfam: PF04519; InterPro: IPR007607; hypothetical protein 1583542 12366400 HMPREF0462_1572 Helicobacter pylori 83 hypothetical protein YP_005786138.1 1583132 D 585538 CDS YP_005786139.1 385226214 12366401 1583566..1586565 1 NC_017375.1 COG: COG1197; Pfam: PF02559,PF00270,PF00271,PF03461; InterPro: IPR004576; transcription-repair coupling factor 1586565 trcF 12366401 trcF Helicobacter pylori 83 transcription-repair coupling factor YP_005786139.1 1583566 D 585538 CDS YP_005786140.1 385226215 12366402 1586689..1587192 1 NC_017375.1 COG: COG0723; Pfam: PF00355; InterPro: IPR006317; ubiquinol-cytochrome c reductase 1587192 petA 12366402 petA Helicobacter pylori 83 ubiquinol-cytochrome c reductase YP_005786140.1 1586689 D 585538 CDS YP_005786141.1 385226216 12366403 1587203..1588441 1 NC_017375.1 COG: COG1290; Pfam: PF00033,PF00032; InterPro: IPR016175; ubiquinol-cytochrome c reductase 1588441 petB 12366403 petB Helicobacter pylori 83 ubiquinol-cytochrome c reductase YP_005786141.1 1587203 D 585538 CDS YP_005786142.1 385226217 12366404 1588438..1589295 1 NC_017375.1 COG: COG2857; Pfam: PF00034,PF02167; ubiquinol-cytochrome c reductase cytochrome c1 subunit 1589295 fbcC 12366404 fbcC Helicobacter pylori 83 ubiquinol-cytochrome c reductase cytochrome c1 subunit YP_005786142.1 1588438 D 585538 CDS YP_005786143.1 385226218 12366405 1589379..1589681 1 NC_017375.1 hypothetical protein 1589681 12366405 HMPREF0462_1577 Helicobacter pylori 83 hypothetical protein YP_005786143.1 1589379 D 585538 CDS YP_005786144.1 385226219 12366406 1589720..1590466 1 NC_017375.1 COG: COG2194; Pfam: PF00884; InterPro: IPR000917; hypothetical protein 1590466 12366406 HMPREF0462_1578 Helicobacter pylori 83 hypothetical protein YP_005786144.1 1589720 D 585538 CDS YP_005786145.1 385226220 12366407 1590495..1590884 1 NC_017375.1 COG: COG2194; Pfam: PF00884; InterPro: IPR000917; metal-dependent hydrolase fragment 2 1590884 12366407 HMPREF0462_1579 Helicobacter pylori 83 metal-dependent hydrolase fragment 2 YP_005786145.1 1590495 D 585538 CDS YP_005786146.1 385226221 12366408 1590881..1591030 1 NC_017375.1 hypothetical protein 1591030 12366408 HMPREF0462_1580 Helicobacter pylori 83 hypothetical protein YP_005786146.1 1590881 D 585538 CDS YP_005786147.1 385226222 12366409 complement(1591236..1593083) 1 NC_017375.1 COG: COG0768; Pfam: PF03717,PF00905; InterPro: IPR001460; cell division protein FtsI 1593083 ftsI 12366409 ftsI Helicobacter pylori 83 cell division protein FtsI YP_005786147.1 1591236 R 585538 CDS YP_005786148.1 385226223 12366410 complement(1593233..1593562) 1 NC_017375.1 COG: COG1677; Pfam: PF02049; InterPro: IPR001624; flagellar hook-basal body complex protein FliE 1593562 fliE 12366410 fliE Helicobacter pylori 83 flagellar hook-basal body complex protein FliE YP_005786148.1 1593233 R 585538 CDS YP_005786149.1 385226224 12366411 complement(1593690..1594175) 1 NC_017375.1 COG: COG1558; Pfam: PF00460,PF06429; InterPro: IPR006299; flagellar basal-body rod protein FlgC 1594175 flgC 12366411 flgC Helicobacter pylori 83 flagellar basal-body rod protein FlgC YP_005786149.1 1593690 R 585538 CDS YP_005786150.1 385226225 12366412 complement(1594188..1594610) 1 NC_017375.1 COG: COG1815; Pfam: PF00460; InterPro: IPR006300; flagellar basal-body rod protein FlgB 1594610 flgB 12366412 flgB Helicobacter pylori 83 flagellar basal-body rod protein FlgB YP_005786150.1 1594188 R 585538 CDS YP_005786151.1 385226226 12366413 1594833..1595999 1 NC_017375.1 COG: COG0772; Pfam: PF01098; InterPro: IPR001182; FtsW/RodA/SpoVE family cell division protein 1595999 ftsW 12366413 ftsW Helicobacter pylori 83 FtsW/RodA/SpoVE family cell division protein YP_005786151.1 1594833 D 585538 CDS YP_005786152.1 385226227 12366414 complement(1596023..1597024) 1 NC_017375.1 COG: COG0614; Pfam: PF01497; iron(III) ABC superfamily ATP binding cassette transporter 1597024 ceuE 12366414 ceuE Helicobacter pylori 83 iron(III) ABC superfamily ATP binding cassette transporter YP_005786152.1 1596023 R 585538 CDS YP_005786153.1 385226228 12366415 1597224..1597859 1 NC_017375.1 COG: COG0450; Pfam: PF00578; InterPro: IPR012335; peroxiredoxin 1597859 tsaA 12366415 tsaA Helicobacter pylori 83 peroxiredoxin YP_005786153.1 1597224 D 585538 CDS YP_005786154.1 385226229 12366416 1598003..1598818 1 NC_017375.1 COG: COG1464; Pfam: PF03180; InterPro: IPR004872; D-methionine ABC superfamily ATP binding cassette transporter, binding protein 1598818 metQ 12366416 metQ Helicobacter pylori 83 D-methionine ABC superfamily ATP binding cassette transporter, binding protein YP_005786154.1 1598003 D 585538 CDS YP_005786155.1 385226230 12366417 complement(1598886..1600661) 1 NC_017375.1 COG: COG0768; Pfam: PF03717,PF00905; InterPro: IPR001460; penicillin-binding protein 2 1600661 mrdA 12366417 mrdA Helicobacter pylori 83 penicillin-binding protein 2 YP_005786155.1 1598886 R 585538 CDS YP_005786156.1 385226231 12366418 complement(1600642..1601085) 1 NC_017375.1 hypothetical protein 1601085 12366418 HMPREF0462_1590 Helicobacter pylori 83 hypothetical protein YP_005786156.1 1600642 R 585538 CDS YP_005786157.1 385226232 12366419 complement(1601098..1601724) 1 NC_017375.1 COG: COG0218; Pfam: PF01926; InterPro: IPR002917; ribosome biogenesis GTP-binding protein YsxC 1601724 ysxC 12366419 ysxC Helicobacter pylori 83 ribosome biogenesis GTP-binding protein YsxC YP_005786157.1 1601098 R 585538 CDS YP_005786158.1 385226233 12366420 complement(1601721..1602278) 1 NC_017375.1 COG: COG1934; Pfam: PF03968; InterPro: IPR005653; lipopolysaccharide ABC superfamily ATP binding cassette transporter, permease protein 1602278 lptA 12366420 lptA Helicobacter pylori 83 lipopolysaccharide ABC superfamily ATP binding cassette transporter, permease protein YP_005786158.1 1601721 R 585538 CDS YP_005786159.1 385226234 12366421 complement(1602278..1602871) 1 NC_017375.1 hypothetical protein 1602871 12366421 HMPREF0462_1593 Helicobacter pylori 83 hypothetical protein YP_005786159.1 1602278 R 585538 CDS YP_005786160.1 385226235 12366422 complement(1602846..1603340) 1 NC_017375.1 COG: COG1778; Pfam: PF08282; InterPro: IPR010023; 3-deoxy-manno-octulosonate-8-phosphatase 1603340 kdsC 12366422 kdsC Helicobacter pylori 83 3-deoxy-manno-octulosonate-8-phosphatase YP_005786160.1 1602846 R 585538 CDS YP_005786161.1 385226236 12366423 complement(1603337..1604284) 1 NC_017375.1 COG: COG0797; Pfam: PF03330,PF05036; InterPro: IPR012997; rare lipoprotein A 1604284 rlpA 12366423 rlpA Helicobacter pylori 83 rare lipoprotein A YP_005786161.1 1603337 R 585538 CDS YP_005786162.1 385226237 12366424 complement(1604284..1605411) 1 NC_017375.1 COG: COG0741; Pfam: PF01464,PF01476; InterPro: IPR008258; regulatory protein DniR 1605411 dniR 12366424 dniR Helicobacter pylori 83 regulatory protein DniR YP_005786162.1 1604284 R 585538 CDS YP_005786163.1 385226238 12366425 complement(1605497..1606261) 1 NC_017375.1 COG: COG0084; Pfam: PF01026; InterPro: IPR015991; TatD family hydrolase 1606261 12366425 HMPREF0462_1597 Helicobacter pylori 83 TatD family hydrolase YP_005786163.1 1605497 R 585538 CDS YP_005786164.1 385226239 12366426 1606336..1606956 1 NC_017375.1 COG: COG0307; Pfam: PF00677; InterPro: IPR001783; riboflavin synthase subunit alpha 1606956 ribE 12366426 ribE Helicobacter pylori 83 riboflavin synthase subunit alpha YP_005786164.1 1606336 D 585538 CDS YP_005786165.1 385226240 12366427 1606957..1607229 1 NC_017375.1 COG: COG2257; Pfam: PF01312; InterPro: IPR004683; FlhB domain-containing protein 1607229 12366427 HMPREF0462_1599 Helicobacter pylori 83 FlhB domain-containing protein YP_005786165.1 1606957 D 585538 CDS YP_005786166.1 385226241 12366428 1607251..1608234 1 NC_017375.1 COG: COG1135; Pfam: PF00005,PF08352; InterPro: IPR003593; D-methionine ABC superfamily ATP binding cassette transporter, ABC protein 1608234 metN 12366428 metN Helicobacter pylori 83 D-methionine ABC superfamily ATP binding cassette transporter, ABC protein YP_005786166.1 1607251 D 585538 CDS YP_005786167.1 385226242 12366429 1608236..1608883 1 NC_017375.1 COG: COG2011; Pfam: PF00528; metal ion ABC superfamily ATP binding cassette transporter, membrane protein 1608883 12366429 HMPREF0462_1601 Helicobacter pylori 83 metal ion ABC superfamily ATP binding cassette transporter, membrane protein YP_005786167.1 1608236 D 585538 CDS YP_005786168.1 385226243 12366430 complement(1609072..1609503) 1 NC_017375.1 hypothetical protein 1609503 12366430 HMPREF0462_1602 Helicobacter pylori 83 hypothetical protein YP_005786168.1 1609072 R 585538 CDS YP_005786169.1 385226244 12366431 complement(1609513..1610109) 1 NC_017375.1 Pfam: PF01569; InterPro: IPR000326; hypothetical protein 1610109 12366431 HMPREF0462_1603 Helicobacter pylori 83 hypothetical protein YP_005786169.1 1609513 R 585538 CDS YP_005786170.1 385226245 12366432 complement(1610106..1611002) 1 NC_017375.1 COG: COG0472; Pfam: PF00953; InterPro: IPR000715; methicillin resistance protein 1611002 llm 12366432 llm Helicobacter pylori 83 methicillin resistance protein YP_005786170.1 1610106 R 585538 CDS YP_005786171.1 385226246 12366433 1611253..1612041 1 NC_017375.1 COG: COG0854; Pfam: PF03740; InterPro: IPR013785; pyridoxine 5'-phosphate synthase 1612041 pdxJ 12366433 pdxJ Helicobacter pylori 83 pyridoxine 5'-phosphate synthase YP_005786171.1 1611253 D 585538 CDS YP_005786172.1 385226247 12366434 1612043..1612966 1 NC_017375.1 COG: COG1995; Pfam: PF04166; InterPro: IPR005255; 4-hydroxythreonine-4-phosphate dehydrogenase 1612966 pdxA 12366434 pdxA Helicobacter pylori 83 4-hydroxythreonine-4-phosphate dehydrogenase YP_005786172.1 1612043 D 585538 CDS YP_005786173.1 385226248 12366435 1613029..1614051 1 NC_017375.1 COG: COG0533; Pfam: PF00814; InterPro: IPR000905; O-sialoglycoprotein endopeptidase 1614051 gcp 12366435 gcp Helicobacter pylori 83 O-sialoglycoprotein endopeptidase YP_005786173.1 1613029 D 585538 CDS YP_005786174.1 385226249 12366436 1614712..1614840 1 NC_017375.1 hypothetical protein 1614840 12366436 HMPREF0462_1608 Helicobacter pylori 83 hypothetical protein YP_005786174.1 1614712 D 585538 CDS YP_005786175.1 385226250 12366437 1614934..1615722 1 NC_017375.1 COG: COG4786; Pfam: PF00460,PF06429; InterPro: IPR012834; flagellar basal-body rod protein FlgG 1615722 flgG2 12366437 flgG2 Helicobacter pylori 83 flagellar basal-body rod protein FlgG YP_005786175.1 1614934 D 585538 CDS YP_005786176.1 385226251 12366438 complement(1616409..1617170) 1 NC_017375.1 COG: COG4735; Pfam: PF03667; InterPro: IPR005367; hypothetical protein 1617170 12366438 HMPREF0462_1610 Helicobacter pylori 83 hypothetical protein YP_005786176.1 1616409 R 585538 CDS