-- dump date   	20120504_150530
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_005510704.1	manually curated
YP_005510705.1	COGs: COG0593 ATPase involved in DNA replication initiation; InterPro IPR020591:IPR001957:IPR013317:IPR013159:IPR 003593:IPR010921; KEGG: aae:aq_322 chromosome replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; SPTR: A8UU23 Chromosomal replication initiator protein dnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_005510706.1	KEGG: aae:aq_2175 hypothetical protein; SPTR: O67924 Uncharacterized protein aq_2175; PFAM: Bacterial cellulose synthase subunit; NapC/NirT cytochrome c family, N-terminal region
YP_005510707.1	InterPro IPR010178; KEGG: aae:aq_2036 hypothetical protein; SPTR: O67827 Uncharacterized protein aq_2036; TIGRFAM: integral membrane protein TIGR01906; PFAM: Protein of unknown function (DUF1461); TIGRFAM: integral membrane protein TIGR01906
YP_005510708.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR002198:IPR016040; KEGG: rxy:Rxyl_2798 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Q1ASB7 Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_005510709.1	COGs: COG1692 conserved hypothetical protein; InterPro IPR005235:IPR004843; KEGG: aae:aq_1794 hypothetical protein; PFAM: metallophosphoesterase; SPTR: O67663 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR00282
YP_005510710.1	COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR004507:IPR003382; KEGG: hya:HY04AAS1_1506 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; SPTR: A8UT15 Phenylacrylic acid decarboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases
YP_005510711.1	COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: lic:LIC20188 sodium/solute symporter family protein; PFAM: Na+/solute symporter; SPTR: Q75FJ4 Sodium:solute symporter family; PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily
YP_005510712.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR001176:IPR004839:IPR015424:IPR005829:IPR 015421; KEGG: aae:aq_1969 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: O67781 Aspartate aminotransferase; PFAM: Aminotransferase class I and II
YP_005510713.1	COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002347:IPR002198:IPR016040; KEGG: aae:aq_1552 enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: short-chain dehydrogenase/reductase SDR; SPTR: O67505 Enoyl-[acyl-carrier-protein] reductase [NADH]; PFAM: short chain dehydrogenase
YP_005510714.1	COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase; InterPro IPR010210:IPR002915:IPR013785; KEGG: aae:aq_1554 fructose-bisphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Fructose-bisphosphate aldolase; SPTR: O67506 Uncharacterized aldolase aq_1554; TIGRFAM: predicted phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: predicted phospho-2-dehydro-3-deoxyheptonate aldolase
YP_005510715.1	InterPro IPR006260; KEGG: aae:aq_1982 hypothetical protein; SPTR: A8UXI4 Predicted repair protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_005510716.1	COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: aae:aq_1326 molybdopterin-guainine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; SPTR: A8USU4 Molybdopterin-guainine dinucleotide biosynthesis protein B; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB
YP_005510717.1	COGs: COG1109 Phosphomannomutase; InterPro IPR005841:IPR005844:IPR005845:IPR005846:IPR 005843:IPR016055:IPR018252:IPR016066; KEGG: aae:aq_501 phosphoglucomutase/phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: A8UR33 Phosphoglucomutase/phosphomannomutase; tmRNA as predicted by Rfam (RF00023), score 141.83; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_005510718.1	COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: tex:Teth514_1824 hypothetical protein; PFAM: protein of unknown function DUF45; SPTR: B0K2F5 Putative uncharacterized protein; PFAM: Protein of unknown function DUF45
YP_005510719.1	COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR004473:IPR014021:IPR007409:IPR006935:IPR 014001:IPR018247; KEGG: pmo:Pmob_1070 HsdR family type I site-specific deoxyribonuclease; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; SPTR: A9BG33 Type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family
YP_005510720.1	KEGG: fno:Fnod_0505 hypothetical protein; SPTR: A7HKD6 Putative uncharacterized protein
YP_005510721.1	COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: csc:Csac_2676 DNA polymerase beta subunit; PFAM: DNA polymerase beta domain protein region; SPTR: A4XMW2 DNA polymerase, beta domain protein region; PFAM: Nucleotidyltransferase domain
YP_005510722.1	COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: mja:MJ1531 type I restriction-modification enzyme, S subunit, putative; PFAM: restriction modification system DNA specificity domain; SPTR: Q58926 Uncharacterized protein MJ1531; PFAM: Type I restriction modification DNA specificity domain
YP_005510723.1	COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002296:IPR004546:IPR003356:IPR002052; KEGG: csc:Csac_2680 type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: A4XMW6 Type I restriction-modification system, M subunit; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; type I restriction system adenine methylase (hsdM)
YP_005510724.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR016366:IPR011703; KEGG: aae:aq_240 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: A8UV33 Putative uncharacterized protein; PFAM: ATPase family associated with various cellular activities (AAA)
YP_005510725.1	InterPro IPR003728; KEGG: aae:aq_260 hypothetical protein; PFAM: protein of unknown function DUF150; SPTR: O66619 Ribosome maturation factor rimP; PFAM: Uncharacterised BCR, YhbC family COG0779
YP_005510726.1	COGs: COG0195 Transcription elongation factor; InterPro IPR010213:IPR004088:IPR003029:IPR013735:IPR 009019:IPR016027:IPR012340:IPR015946; KEGG: aae:aq_259 transcription elongation factor NusA; PFAM: RNA binding S1 domain protein; NusA domain protein; SPTR: A8UT94 Transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA
YP_005510727.1	COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR001566:IPR010280:IPR016027; KEGG: aae:aq_257 RNA methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: A8UT95 RNA methyltransferase (TrmA-family) protein; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA
YP_005510728.1	InterPro IPR000788:IPR013346:IPR005144:IPR013509:IPR 008926; KEGG: aae:aq_094 ribonucleotide reductase alpha chain; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein; SPTR: A8URA6 Ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit
YP_005510729.1	COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR000358:IPR009078:IPR012348; KEGG: aac:Aaci_1600 ribonucleoside-diphosphate reductase; PFAM: ribonucleotide reductase; SPTR: A8URA5 Ribonucleotide reductase beta chain; PFAM: Ribonucleotide reductase, small chain
YP_005510730.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR001411:IPR004638:IPR011701:IPR016196; KEGG: hya:HY04AAS1_0985 drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; SPTR: B4U960 Drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005510731.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR004638:IPR011701:IPR016196; KEGG: aae:aq_1062 major facilitator family transporter; PFAM: major facilitator superfamily MFS_1; SPTR: O67160 Major facilitator family transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005510732.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR003997:IPR006143:IPR011053; KEGG: sul:SYO3AOP1_1379 secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein; SPTR: C4FIK8 Multidrug-efflux transporter, MFS family; PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A)
YP_005510733.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: saf:SULAZ_1241 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: C1DVS4 Outer membrane efflux protein; PFAM: Outer membrane efflux protein
YP_005510734.1	COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR009057:IPR011075:IPR012287; KEGG: saf:SULAZ_1240 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: C1DVS3 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_005510735.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: aae:aq_1332 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: O67351 Putative uncharacterized protein; PFAM: Outer membrane efflux protein
YP_005510736.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: sul:SYO3AOP1_0062 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: B2V6H8 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005510737.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: sul:SYO3AOP1_1383 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: A8UTN1 Cation efflux (AcrB/AcrD/AcrF family) protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_005510738.1	COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265:IPR003651:IPR011257:IPR004035; KEGG: hya:HY04AAS1_0888 DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: B4U8W4 DNA-(Apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III
YP_005510739.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: sus:Acid_2517 beta-lactamase domain-containing protein; SPTR: Q024S0 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily
YP_005510740.1	COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: aae:aq_083 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; SPTR: O66495 Putative uncharacterized protein; PFAM: EAL domain
YP_005510741.1	COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR012134:IPR000965:IPR016161:IPR020593:IPR 016162:IPR016163; KEGG: aae:aq_1071 gamma-glutamyl phosphate reductase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: A8UUG5 Gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_005510742.1	COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006407:IPR004193:IPR006047:IPR006048:IPR 006589:IPR017853:IPR014756:IPR013783:IPR013781:IPR013780; KEGG: aae:aq_722 glycogen branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: O66936 1,4-alpha-glucan-branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; manually curated; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
YP_005510743.1	KEGG: afu:AF0486 hypothetical protein; SPTR: O29764 Putative uncharacterized protein
YP_005510744.1	COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR005748:IPR007695:IPR007860:IPR007696:IPR 007861:IPR000432:IPR016151; KEGG: aae:aq_308 DNA mismatch repair protein MutS; PFAM: MutS III domain protein; MutS II domain protein; DNA mismatch repair protein MutS domain protein; MutS IV domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: A8UTM4 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS
YP_005510745.1	COGs: COG1418 HD superfamily hydrolase; InterPro IPR017705:IPR006675:IPR004088:IPR018111:IPR 006674:IPR004087:IPR003607; KEGG: aae:aq_1732 phosphodiesterase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: KH domain protein; metal-dependent phosphohydrolase HD region; SPTR: A8URW9 Putative uncharacterized protein; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG
YP_005510746.1	COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: aae:aq_1731 hypothetical protein; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: O67621 Putative uncharacterized protein; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_005510747.1	COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterPro IPR004532:IPR002547:IPR005121:IPR005146:IPR 005147:IPR020825:IPR016027:IPR009061:IPR012340; KEGG: aae:aq_1730 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/4 domain protein; t-RNA-binding domain protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: O67620 Phenylalanyl-tRNA synthetase beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_005510748.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR005894:IPR003439:IPR003593:IPR017871; KEGG: kcr:Kcr_0542 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B1L4B6 Daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_005510749.1	InterPro IPR013526:IPR000412:IPR013525; KEGG: kcr:Kcr_0543 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: B1L4B7 ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family; daunorubicin resistance ABC transporter membrane protein
YP_005510750.1	COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: aae:aq_619 adhesion B precursor; PFAM: periplasmic solute binding protein; SPTR: C6PF00 Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family
YP_005510751.1	COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: aae:aq_620 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8UUD6 ABC transporter; PFAM: ABC transporter
YP_005510752.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: aae:aq_621 hypothetical protein; PFAM: ABC-3 protein; SPTR: A8UUD5 Putative uncharacterized protein; PFAM: ABC 3 transport family
YP_005510753.1	COGs: COG1039 Ribonuclease HIII; InterPro IPR004641:IPR001352:IPR012337:IPR018151; KEGG: aae:aq_1768 hypothetical protein; PFAM: ribonuclease HII/HIII; SPTR: A8US70 Ribonuclease; TIGRFAM: ribonuclease HIII; PFAM: Ribonuclease HII; TIGRFAM: ribonuclease HIII
YP_005510754.1	KEGG: hya:HY04AAS1_0520 hypothetical protein; SPTR: A8UUZ7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892)
YP_005510755.1	COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR020441:IPR002078:IPR003018:IPR002197:IPR 003593:IPR009057; KEGG: aae:aq_1792 NtrC family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; GAF domain protein; SPTR: A8UXU7 Transcriptional regulator (NtrC family) protein; PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein
YP_005510756.1	KEGG: hya:HY04AAS1_0960 hypothetical protein; SPTR: B4U936 Putative uncharacterized protein
YP_005510757.1	COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: aae:aq_1178 phosphoribosylaminoimidazole carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: O67239 Phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_005510758.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR000700:IPR013655:IPR 001610; KEGG: tcx:Tcr_0090 diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005510759.1	COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); InterPro IPR002582:IPR004568:IPR008278; KEGG: aae:aq_813 holo-[acyl-carrier protein] synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: A8UXY3 Holo-[acyl-carrier protein] synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_005510760.1	COGs: COG2346 Truncated hemoglobins; InterPro IPR001486:IPR009050:IPR012292; KEGG: sus:Acid_7805 globin; PFAM: globin; SPTR: C4FJP9 Hemoglobin domain protein; PFAM: Bacterial-like globin
YP_005510761.1	InterPro IPR001486:IPR009050:IPR012292; KEGG: npu:Npun_R1005 globin; PFAM: globin; SPTR: B2IV60 Globin
YP_005510762.1	KEGG: saf:SULAZ_1186 hypothetical protein; SPTR: C1DVM0 Putative uncharacterized protein
YP_005510763.1	InterPro IPR010094:IPR010095; KEGG: saf:SULAZ_0797 transposase, OrfB family; PFAM: transposase IS605 OrfB; SPTR: C1DUJ0 Transposase, OrfB family; TIGRFAM: transposase ; transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain
YP_005510764.1	COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006287:IPR002818; KEGG: sul:SYO3AOP1_1101 DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; SPTR: B2V9U4 DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; intracellular protease, PfpI family
YP_005510765.1	COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR002478:IPR013216; KEGG: aae:aq_2071 hypothetical protein; PFAM: Methyltransferase type 11; SMART: PUA domain containing protein; SPTR: O67850 Putative uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase
YP_005510766.1	COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: aae:aq_2195 undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; SPTR: A8URP6 Undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_005510767.1	COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: hya:HY04AAS1_0212 cell cycle protein; PFAM: cell cycle protein; SPTR: A8UWW0 Cell division protein FtsW; PFAM: Cell cycle protein
YP_005510768.1	InterPro IPR002541; KEGG: aae:aq_055 cytochrome c biogenesis protein; PFAM: cytochrome c assembly protein; SPTR: A8UTA7 Cytochrome c biogenesis protein; PFAM: Cytochrome C assembly protein
YP_005510769.1	COGs: COG0703 Shikimate kinase; InterPro IPR000623; KEGG: aae:aq_2177 shikimate kinase; PFAM: shikimate kinase; PRIAM: Shikimate kinase; SPTR: O67925 Shikimate kinase; PFAM: Shikimate kinase
YP_005510770.1	COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: aae:aq_1590 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: A8UR46 Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase
YP_005510771.1	COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR019480:IPR017938; KEGG: aae:aq_2098 hypothetical protein; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: O67867 Putative uncharacterized protein; PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
YP_005510772.1	COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; InterPro IPR016425:IPR004588:IPR011005; KEGG: aae:aq_1540 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein; SPTR: A8UW96 GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_005510773.1	COGs: COG0379 Quinolinate synthase; InterPro IPR003473; KEGG: aae:aq_1889 quinolinate synthetase; PFAM: Quinolinate synthetase A; PRIAM: Quinolinate synthase; SPTR: O67730 Quinolinate synthetase A; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit
YP_005510774.1	COGs: COG0319 metal-dependent hydrolase; InterPro IPR002036:IPR020549; KEGG: aae:aq_1354 hypothetical protein; PFAM: protein of unknown function UPF0054; SPTR: O67367 Putative metalloprotease aq_1354; manually curated; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043
YP_005510775.1	COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: aae:aq_1351 phosphate starvation-inducible protein; PFAM: PhoH family protein; SPTR: A8UXF9 Phosphate starvation-inducible protein; PFAM: KH domain; PhoH-like protein
YP_005510776.1	COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: aae:aq_1991 heat shock protein X; PFAM: peptidase M48 Ste24p; SPTR: A8UXF8 Heat shock protein X; PFAM: Peptidase family M48
YP_005510777.1	COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: aae:aq_618 protease I; PFAM: ThiJ/PfpI domain protein; SPTR: O66869 Protease I; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_005510778.1	COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR005762:IPR013221:IPR004101:IPR016040; KEGG: aae:aq_2075 UDP-N-acetylmuramoylalanine-D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: O67852 UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_005510779.1	COGs: COG1324 conserved hypothetical protein involved in tolerance to divalent cations; InterPro IPR004323:IPR011322; KEGG: aae:aq_1005 periplasmic divalent cation tolerance protein; PFAM: CutA1 divalent ion tolerance protein; SPTR: O67123 Periplasmic divalent cation tolerance protein; PFAM: CutA1 divalent ion tolerance protein
YP_005510780.1	COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR006220:IPR011702:IPR001317:IPR006221:IPR 017926:IPR000991; KEGG: aae:aq_549 anthranilate synthase component II; PFAM: glutamine amidotransferase class-I; SPTR: O66825 Anthranilate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
YP_005510781.1	COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR020459:IPR011904:IPR000873:IPR020845; KEGG: saf:SULAZ_1440 acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A8UVH2 Acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase
YP_005510782.1	COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: tte:TTE0840 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: A8UT29 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583
YP_005510783.1	COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: aae:aq_529 outer membrane protein C; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8URJ6 Outer membrane protein c; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor
YP_005510784.1	KEGG: dma:DMR_24090 hypothetical protein; SPTR: C4XTA3 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_005510785.1	COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002986:IPR000183:IPR009006; KEGG: aae:aq_1208 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: O67262 Diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_005510786.1	COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570:IPR000462; KEGG: aae:aq_958 phosphotidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: A8URZ7 Phosphotidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_005510787.1	COGs: COG2607 ATPase (AAA+ superfamily); InterPro IPR008533; KEGG: hya:HY04AAS1_0357 protein of unknown function DUF815; PFAM: protein of unknown function DUF815; SPTR: A8UUC6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF815)
YP_005510788.1	COGs: COG0061 sugar kinase; InterPro IPR002504:IPR016064:IPR017437; KEGG: aae:aq_909 hypothetical protein; PFAM: ATP-NAD/AcoX kinase; PRIAM: NAD(+) kinase; SPTR: A8UR52 Putative uncharacterized protein; PFAM: ATP-NAD kinase
YP_005510789.1	COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347; KEGG: aae:aq_908 phosphoheptose isomerase; PFAM: sugar isomerase (SIS); SPTR: O67054 Phosphoheptose isomerase; PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase
YP_005510790.1	InterPro IPR008331:IPR009078:IPR012347; KEGG: aae:aq_331 hypothetical protein; PFAM: Ferritin Dps family protein; SPTR: A8UUC7 Putative uncharacterized protein; PFAM: Ferritin-like domain
YP_005510791.1	COGs: COG0058 Glucan phosphorylase; InterPro IPR011834:IPR000811; KEGG: hya:HY04AAS1_1065 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: B4U9E0 Phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases
YP_005510792.1	COGs: COG0058 Glucan phosphorylase; InterPro IPR011834:IPR000811; KEGG: hya:HY04AAS1_1065 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: B4U9E0 Phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: Starch synthase catalytic domain; Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases
YP_005510793.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: sul:SYO3AOP1_0434 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: B2V804 Major facilitator superfamily MFS_1; PFAM: Sugar (and other) transporter
YP_005510794.1	KEGG: conserved hypothetical protein; SPTR: C7LLH6 SIS domain protein
YP_005510795.1	COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003348:IPR008978; KEGG: hya:HY04AAS1_1511 arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; PRIAM: Arsenite-transporting ATPase; SPTR: A8UVV6 Anion transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA)
YP_005510796.1	COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR006311:IPR006137:IPR017909; KEGG: aae:aq_965 hydrogenase small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: A7BI79 Ni,Fe-hydrogenase small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA)
YP_005510797.1	KEGG: aae:aq_963 hypothetical protein; SPTR: A7BI80 Putative uncharacterized protein orf22
YP_005510798.1	COGs: COG0247 Fe-S oxidoreductase; InterPro IPR017896:IPR012285:IPR017900:IPR004017:IPR 009051; KEGG: aae:aq_961 heterodisulfide reductase; SPTR: A7BI81 Fe-S oxidoreductase; PFAM: Cysteine-rich domain
YP_005510799.1	COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: aae:aq_960 hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: A7BI82 Ni,Fe-hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase
YP_005510800.1	COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408:IPR004143:IPR003142; KEGG: aae:aq_566 biotin [acetyl-CoA-carboxylase] ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; SPTR: A8UVI3 Biotin [acetyl-CoA-carboxylase] ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_005510801.1	COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005815:IPR005814:IPR015424:IPR015421; KEGG: aae:aq_170 DapA aminotransferase; PFAM: aminotransferase class-III; SPTR: O66557 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase
YP_005510802.1	COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR004404:IPR000581:IPR020558; KEGG: aae:aq_837 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: O67009 Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_005510803.1	COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: saf:SULAZ_1499 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: C1DWH8 Putative uncharacterized protein; PFAM: DUF218 domain
YP_005510804.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: hya:HY04AAS1_0965 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8UXF2 Putative uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR
YP_005510805.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: aae:aq_1988 TolQ-like protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8UXF4 Putative uncharacterized protein; PFAM: MotA/TolQ/ExbB proton channel family
YP_005510806.1	COGs: COG1729 conserved hypothetical protein; InterPro IPR019734:IPR013026:IPR001440:IPR011990; KEGG: aae:aq_1989 hypothetical protein; PFAM: TPR repeat-containing protein; SPTR: A8UXF5 Putative uncharacterized protein
YP_005510807.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: aae:aq_1990 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: A8UXF6 Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family
YP_005510808.1	COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192:IPR015424:IPR020578:IPR015421; KEGG: hya:HY04AAS1_0969 aminotransferase class V; PFAM: aminotransferase class V; SPTR: A8UR38 Soluble hydrogenase small subunit; PFAM: Aminotransferase class-V
YP_005510809.1	InterPro IPR000620; KEGG: aae:aq_246 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8UT53 Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_005510810.1	COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451:IPR011004; KEGG: aae:aq_1660 hypothetical protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: O67576 Putative uncharacterized protein
YP_005510811.1	COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576:IPR015911:IPR015824:IPR015901; KEGG: aae:aq_118 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: A8UV21 Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_005510812.1	KEGG: hya:HY04AAS1_1040 hypothetical protein; SPTR: A8UR62 Putative uncharacterized protein
YP_005510813.1	COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798:IPR011060:IPR001468:IPR013785; KEGG: aae:aq_1787 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: A8UR63 Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_005510814.1	InterPro IPR001455; KEGG: aae:aq_1421 hypothetical protein; PFAM: SirA family protein; SPTR: A8UW85 Putative uncharacterized protein; PFAM: SirA-like protein; Protein of unknown function (DUF3343)
YP_005510815.1	KEGG: aae:aq_1842 hypothetical protein; SPTR: A8UW86 Putative uncharacterized protein
YP_005510816.1	COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR011816:IPR001264:IPR001460:IPR012338; KEGG: aae:aq_624 penicillin binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: A8UW76 Penicillin binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family
YP_005510817.1	COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; InterPro IPR004424:IPR006204:IPR020568:IPR014721; KEGG: aae:aq_915 hypothetical protein; PFAM: GHMP kinase; SPTR: A8UWV3 Peptidyl-tRNA hydrolase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_005510818.1	COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946:IPR000836:IPR000842; KEGG: hya:HY04AAS1_0016 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: B4U638 Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_005510819.1	COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); InterPro IPR001021:IPR020055:IPR011035:IPR020056:IPR 020057; KEGG: hya:HY04AAS1_0955 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; SPTR: A8UWU9 General stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form
YP_005510820.1	COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR001328:IPR018171; KEGG: aae:aq_346 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: A8UWU8 Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_005510821.1	COGs: COG0021 Transketolase; InterPro IPR005478:IPR005474:IPR018970:IPR005475:IPR 005476:IPR009014:IPR015941; KEGG: aae:aq_1765 transketolase; PFAM: Transketolase domain protein; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; Transketolase central region; SPTR: A8UR89 Transketolase; TIGRFAM: transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_005510822.1	COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR017896:IPR019574:IPR001450:IPR 017900:IPR000283; KEGG: aae:aq_437 NADH dehydrogenase I chain G; PFAM: ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8UV38 NADH dehydrogenase I chain G; PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S binding domain
YP_005510823.1	COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336; KEGG: aae:aq_574 NADH dehydrogenase I chain E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: A8UVM2 NADH dehydrogenase I chain E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit
YP_005510824.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538:IPR019554:IPR019575:IPR001949; KEGG: aae:aq_573 NADH dehydrogenase I chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: O66841 NADH-quinone oxidoreductase subunit F; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_005510825.1	KEGG: hypothetical protein; SPTR: A9DCC2 Protein Y20C6A.4, partially confirmed by transcript evidence
YP_005510826.1	COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273:IPR005122; KEGG: aae:aq_1693 N-terminus of phage SPO1 DNA polymerase; PFAM: Uracil-DNA glycosylase superfamily; SPTR: A8UU74 N-terminus of phage SPO1 DNA polymerase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_005510827.1	COGs: COG0499 S-adenosylhomocysteine hydrolase; InterPro IPR000043:IPR015878:IPR016040:IPR020082; KEGG: aae:aq_1180 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; PRIAM: Adenosylhomocysteinase; SPTR: A8UUD2 Adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase
YP_005510828.1	COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: dau:Daud_0416 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: B1I213 Isochorismatase hydrolase; PFAM: Isochorismatase family
YP_005510829.1	COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR013216; KEGG: aae:aq_2102 ribosomal protein L11 methyltransferase; PFAM: Methyltransferase type 11; SPTR: O67870 Ribosomal protein L11 methyltransferase; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase
YP_005510830.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: aae:aq_1743 hypothetical protein; PFAM: Peptidase M23; SPTR: A8URK6 Putative uncharacterized protein; PFAM: Peptidase family M23
YP_005510831.1	COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: aae:aq_2031 hypothetical protein; PFAM: protein of unknown function DUF374; SPTR: A8USA3 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF374)
YP_005510832.1	COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: aae:aq_2030 Na(+)/H(+) antiporter; PFAM: sodium/hydrogen exchanger; SPTR: O67823 Na(+)/H(+) antiporter; PFAM: Sodium/hydrogen exchanger family
YP_005510833.1	COGs: COG0490 Putative regulatory ligand-binding protein related to C-terminal domains of K+ channels; InterPro IPR006037:IPR016040; KEGG: aae:aq_2028 hypothetical protein; PFAM: TrkA-C domain protein; SPTR: O67822 Putative uncharacterized protein; PFAM: TrkA-C domain
YP_005510834.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: aae:aq_702 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: O66920 Transcriptional regulator (MerR family); PFAM: MerR family regulatory protein
YP_005510835.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR003095:IPR012724:IPR001623:IPR001305:IPR 002939:IPR008971:IPR018253; KEGG: aae:aq_703 chaperone DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8UY48 Chaperone protein dnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_005510836.1	COGs: COG4309 conserved hypothetical protein; InterPro IPR018720; KEGG: cbe:Cbei_1432 hypothetical protein; PFAM: Protein of unknown function DUF2249; SPTR: A6LTD0 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2249)
YP_005510837.1	COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: tdn:Suden_1179 tellurite resistance protein TehB; PFAM: Methyltransferase type 11; SPTR: A8UU14 Tellurite resistance protein TehB; PFAM: Tellurite resistance protein TehB
YP_005510838.1	COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR017790:IPR005311:IPR001460:IPR012338; KEGG: aae:aq_1189 penicillin binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: A8UVM8 Penicillin binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2
YP_005510839.1	KEGG: saf:SULAZ_1621 hypothetical protein; SPTR: A8UVM9 Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD
YP_005510840.1	COGs: COG1792 Cell shape-determining protein; KEGG: aae:aq_847 rod shape-determining protein MreC; SPTR: A8UVN1 Putative uncharacterized protein; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC
YP_005510841.1	COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: aae:aq_845 rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SPTR: A8UVN2 Rod shape determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_005510842.1	COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR004811:IPR006674:IPR007685:IPR004095:IPR 002912:IPR003607:IPR012676:IPR012675; KEGG: aae:aq_844 (p)ppGpp 3-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein; PRIAM: GTP diphosphokinase; SMART: metal-dependent phosphohydrolase HD region; SPTR: A8UVN3 (P)ppGpp 3-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_005510843.1	COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680:IPR011059; KEGG: aae:aq_587 N-ethylammeline chlorohydrolase; PFAM: amidohydrolase; SPTR: A8URA1 N-ethylammeline chlorohydrolase; PFAM: Amidohydrolase family
YP_005510844.1	KEGG: hya:HY04AAS1_0068 hypothetical protein; SPTR: A8USA5 Putative uncharacterized protein
YP_005510845.1	COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR011770:IPR000846:IPR016040; KEGG: aae:aq_916 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: A8USA6 Dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_005510846.1	COGs: COG1371 conserved hypothetical protein; InterPro IPR002804; KEGG: aae:aq_2128 hypothetical protein; PFAM: protein of unknown function DUF101; SPTR: O67888 Putative uncharacterized protein; PFAM: Archease protein family (DUF101/UPF0211)
YP_005510847.1	KEGG: cpe:CPE0216 exonuclease SbcC; SPTR: A8UXN5 Putative uncharacterized protein
YP_005510848.1	InterPro IPR001650; KEGG: cyc:PCC7424_3119 helicase-like protein; PFAM: helicase domain protein; SPTR: A8UXN6 Putative uncharacterized protein
YP_005510849.1	COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR003043:IPR014776:IPR014777:IPR000878:IPR 006366; KEGG: sul:SYO3AOP1_0051 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Q3LGA4 Uroporphyrinogen III methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_005510850.1	InterPro IPR015943:IPR011048:IPR003143; KEGG: pmx:PERMA_0309 heme d1 biosynthesis protein NirF; PFAM: cytochrome d1 heme region; SPTR: Q3LGA5 Putative uncharacterized protein nirF; PFAM: Cytochrome D1 heme domain
YP_005510851.1	COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197:IPR017200:IPR006638; KEGG: pmx:PERMA_0308 heme d1 biosynthesis protein NirJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q3LGA6 Putative uncharacterized protein nirJ; PFAM: Radical SAM superfamily
YP_005510852.1	COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: sul:SYO3AOP1_0460 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: Q3LGA7 Putative uncharacterized protein; PFAM: V4R domain
YP_005510853.1	InterPro IPR003143:IPR009056:IPR011048; KEGG: pmx:PERMA_0307 cytochrome c, class I; PFAM: cytochrome d1 heme region; SPTR: Q3LGA8 Cytochrome c; PFAM: Cytochrome c; Cytochrome D1 heme domain
YP_005510854.1	InterPro IPR009056:IPR003088:IPR003143:IPR011048; KEGG: pmx:PERMA_0306 nitrite reductase (cytochrome cd1) (cytochromeoxidase) (hydroxylamine reductase); PFAM: cytochrome d1 heme region; cytochrome c class I; PRIAM: Hydroxylamine reductase; SPTR: Q3LGA9 Cytochrome cd1 nitrite reductase; PFAM: Cytochrome c; Cytochrome D1 heme domain
YP_005510855.1	COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR017936:IPR003782:IPR012336:IPR012335; KEGG: aae:aq_2189 hypothetical protein; PFAM: electron transport protein SCO1/SenC; SPTR: A8UXC1 Putative uncharacterized protein; PFAM: SCO1/SenC
YP_005510856.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: aae:aq_155 hypothetical protein; PFAM: cytochrome c oxidase subunit I; SPTR: A8UU96 Putative uncharacterized protein; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_005510857.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: mag:amb2222 heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: cytochrome c oxidase subunit I; SPTR: A8UXC0 Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_005510858.1	COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR002429:IPR008972; KEGG: mag:amb2221 heme/copper-type cytochrome/quinol oxidase, subunit 2; PFAM: cytochrome c oxidase subunit II; SPTR: A8UXB8 Heme/copper-type cytochrome/quinol oxidase, subunit 2; PFAM: Cytochrome C oxidase subunit II, periplasmic domain
YP_005510859.1	KEGG: mag:amb2220 hypothetical protein; SPTR: A8UXB7 Putative uncharacterized protein
YP_005510860.1	COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797:IPR017896:IPR001450:IPR003813:IPR 016174:IPR017900:IPR016175; KEGG: mes:Meso_4302 cytochrome b/b6-like; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Cytochrome b/b6 domain; methyl-viologen-reducing hydrogenase delta subunit; SPTR: A8UXB5 Cytochrome b/b6-like protein; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit
YP_005510861.1	InterPro IPR002324:IPR009056:IPR003088; KEGG: abu:Abu_1734 hypothetical protein; PFAM: cytochrome c class I; SPTR: A8UXB0 Cytochrome c, class I
YP_005510862.1	KEGG: sul:SYO3AOP1_0452 nitrous-oxide metabolic protein NosY; SPTR: B2V820 Nitrous-oxide metabolic protein NosY
YP_005510863.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sul:SYO3AOP1_0451 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B2V819 ABC transporter related; PFAM: ABC transporter
YP_005510864.1	COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR006633:IPR006626:IPR011050; KEGG: pmx:PERMA_1260 periplasmic copper-binding protein NosD; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat; SPTR: C0QQT7 Periplasmic copper-binding protein NosD; PFAM: Protein of unknown function (DUF1565); Periplasmic copper-binding protein (NosD)
YP_005510865.1	KEGG: sul:SYO3AOP1_0449 nitrous-oxide reductase accessory protein NosL; SPTR: B2V818 Nitrous-oxide reductase accessory protein NosL; PFAM: NosL
YP_005510866.1	KEGG: pmx:PERMA_1258 hypothetical protein; SPTR: C0QQT5 Putative uncharacterized protein
YP_005510867.1	COGs: COG4263 Nitrous oxide reductase; InterPro IPR002429:IPR011045:IPR008972:IPR015943; KEGG: pmx:PERMA_1257 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II; PRIAM: Nitrous-oxide reductase; SPTR: C0QQT4 Nitrous-oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain
YP_005510868.1	InterPro IPR009056:IPR003088; KEGG: sul:SYO3AOP1_0446 cytochrome c class I; PFAM: cytochrome c class I; SPTR: B2V816 Cytochrome c class I; PFAM: Cytochrome c
YP_005510869.1	COGs: COG0194 Guanylate kinase; InterPro IPR017665:IPR008144:IPR008145:IPR020590; KEGG: hya:HY04AAS1_0765 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: A8UUP9 Guanylate kinase; TIGRFAM: guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_005510870.1	COGs: COG0466 ATP-dependent Lon protease; InterPro IPR001984:IPR004815:IPR003111:IPR003959:IPR 008269:IPR003593:IPR020568:IPR008268; KEGG: aae:aq_242 Lon protease; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: A8UYB2 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_005510871.1	InterPro IPR001911; KEGG: hya:HY04AAS1_0744 30S ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: B4U8H0 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21
YP_005510872.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: aae:aq_1753 lipoprotein NlpD fragment; PFAM: Peptidase M23; SPTR: A8UUN8 Lipoprotein NlpD; PFAM: Peptidase family M23
YP_005510873.1	COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: aae:aq_1612 hypothetical protein; PFAM: Carboxylyase-related protein; SPTR: O67542 Uncharacterized protein aq_1612; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases
YP_005510874.1	InterPro IPR009050:IPR012292; KEGG: hya:HY04AAS1_0366 hypothetical protein; SPTR: B4U7E5 Putative uncharacterized protein
YP_005510875.1	COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR018022:IPR002627; KEGG: aae:aq_1067 tRNA delta-2-isopentenylpyrophosphate (IPP) transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: O67162 tRNA Delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA)
YP_005510876.1	COGs: COG0217 conserved hypothetical protein; InterPro IPR002876:IPR017856; KEGG: aae:aq_1575 hypothetical protein; PFAM: protein of unknown function DUF28; SPTR: O67517 UPF0082 protein aq_1575; PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033
YP_005510877.1	COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR006175:IPR013813; KEGG: aae:aq_364 hypothetical protein; PFAM: Endoribonuclease L-PSP; SPTR: A8UVT0 Putative uncharacterized protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative
YP_005510878.1	COGs: COG1190 Lysyl-tRNA synthetase (class II); InterPro IPR018149:IPR002313:IPR006195:IPR004365:IPR 004364:IPR016027:IPR012340; KEGG: aae:aq_1202 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: A8UWW9 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_005510879.1	COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: aae:aq_2041 ATP synthase F1 gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: A8UXV5 ATP synthase gamma chain; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_005510880.1	COGs: COG0055 F0F1-type ATP synthase beta subunit; InterPro IPR005722:IPR004100:IPR000194:IPR000793:IPR 003593:IPR018118:IPR020003; KEGG: aae:aq_2038 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; SPTR: A8UXV4 ATP synthase subunit B; TIGRFAM: ATP synthase F1, beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit
YP_005510881.1	COGs: COG0689 RNase PH; InterPro IPR002381:IPR001247:IPR015847:IPR020568:IPR 018336; KEGG: aae:aq_924 RNase PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: A8UY27 RNase PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
YP_005510882.1	COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR008179:IPR002496; KEGG: aae:aq_1968 phosphoribosyl-ATP pyrophosphohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; SPTR: O67780 Histidine biosynthesis bifunctional protein hisIE; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase
YP_005510883.1	InterPro IPR013838; KEGG: aae:aq_1631 hypothetical protein; SPTR: O67553 Uncharacterized protein aq_1631
YP_005510884.1	COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR004491:IPR013093:IPR019489:IPR003593; KEGG: aae:aq_192 ATP-dependent protease ATP-binding subunit HslU; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8USK6 ATP-dependent protease ATP-binding subunit; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU
YP_005510885.1	KEGG: aae:aq_194 hypothetical protein; SPTR: A8USK4 Molybdenum cofactor biosynthesis protein
YP_005510886.1	COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: aae:aq_843 hypothetical protein; PFAM: protein of unknown function UPF0079; SPTR: A8URH9 Seryl-tRNA synthetase; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein
YP_005510887.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: aae:aq_1744 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: O67630 Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family
YP_005510888.1	COGs: COG2410 conserved hypothetical protein; InterPro IPR007362; KEGG: sul:SYO3AOP1_0866 protein of unknown function DUF429; PFAM: Protein of unknown function DUF429; SPTR: B2V971 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF429)
YP_005510889.1	COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003852:IPR014729; KEGG: hya:HY04AAS1_0720 osmosensitive K channel His kinase sensor; PFAM: Osmosensitive K channel His kinase sensor; SPTR: B4U8E6 Osmosensitive K channel His kinase sensor; PFAM: Osmosensitive K+ channel His kinase sensor domain; Universal stress protein family
YP_005510890.1	COGs: COG2156 K+-transporting ATPase c chain; InterPro IPR003820; KEGG: tte:TTE2010 K+-transporting ATPase, C chain; PFAM: K transporting ATPase KdpC subunit; PRIAM: Potassium-transporting ATPase; SPTR: B7R902 K+-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit
YP_005510891.1	COGs: COG2216 High-affinity K+ transport system ATPase chain B; InterPro IPR001757:IPR006391:IPR008250:IPR005834:IPR 018247:IPR018303; KEGG: gsu:GSU2481 potassium-transporting ATPase, B subunit; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Q74AA9 Potassium-transporting ATPase, B subunit; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005510892.1	KEGG: sat:SYN_00807 putative cytoplasmic protein; SPTR: Q2LVQ6 Hypothetical cytosolic protein; PFAM: GYD domain
YP_005510893.1	COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240:IPR011060:IPR013785; KEGG: aae:aq_2076 phosphoribosyl anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); SPTR: A8USH7 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase
YP_005510894.1	COGs: COG0710 3-dehydroquinate dehydratase; InterPro IPR001381:IPR018508:IPR013785; KEGG: aae:aq_021 3-dehydroquinate dehydratase; PFAM: dehydroquinase class I; PRIAM: 3-dehydroquinate dehydratase; SPTR: O66440 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type I; PFAM: Type I 3-dehydroquinase; TIGRFAM: 3-dehydroquinate dehydratase, type I
YP_005510895.1	COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518:IPR018223:IPR014729; KEGG: aae:aq_1140 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: A8UTT4 Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_005510896.1	COGs: COG3211 phosphatase; InterPro IPR008557; KEGG: cha:CHAB381_0225 alkaline phosphatase; PFAM: protein of unknown function DUF839; SPTR: A6DDD4 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF839)
YP_005510897.1	COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR013027:IPR004416:IPR002218:IPR020595; KEGG: aae:aq_761 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: glucose-inhibited division protein A; SPTR: O66962 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; TIGRFAM: glucose inhibited division protein A; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A
YP_005510898.1	InterPro IPR006058:IPR001041:IPR012675; KEGG: aae:aq_919a ferredoxin; PFAM: ferredoxin; SPTR: A1IJT8 [2Fe-2S] ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_005510899.1	COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: aae:aq_1204 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: O67259 Thiamine biosynthesis protein thiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC
YP_005510900.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: pmx:PERMA_0459 NlpD fragment; PFAM: Peptidase M23; SPTR: Q75VW7 Putative lipoprotein NlpD (Fragment); PFAM: Peptidase family M23
YP_005510901.1	COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR016040:IPR005810:IPR016102:IPR003781:IPR 005811; KEGG: aae:aq_1888 succinyl-CoA ligase alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; SMART: CoA-binding domain protein; SPTR: Q75VW6 Citryl-CoA synthetase small subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit
YP_005510902.1	COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR009081:IPR000873:IPR006163:IPR002123:IPR 020845; KEGG: aae:aq_999 long-chain-fatty-acid CoA ligase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: A8USH9 Long-chain-fatty-acid CoA ligase; PFAM: Phosphopantetheine attachment site; Acyltransferase; AMP-binding enzyme; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005510903.1	COGs: COG0824 thioesterase; InterPro IPR006684:IPR006683:IPR008272; KEGG: aae:aq_1494 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: A8USI2 Putative uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051
YP_005510904.1	InterPro IPR011701:IPR016196; KEGG: ttr:Tter_1554 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: A8UT57 GTP-binding protein LepA; PFAM: Major Facilitator Superfamily
YP_005510905.1	COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; InterPro IPR001228; KEGG: aae:aq_1323 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: A8URK9 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_005510906.1	KEGG: aae:aq_2063 hypothetical protein; SPTR: A8URL0 Putative uncharacterized protein
YP_005510907.1	COGs: COG4752 conserved hypothetical protein; InterPro IPR019230; KEGG: aae:aq_054 hypothetical protein; PFAM: Protein of unknown function DUF2168; SPTR: O66466 Uncharacterized protein aq_054; PFAM: Uncharacterized protein conserved in bacteria (DUF2168)
YP_005510908.1	COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR003524:IPR018480:IPR018481; KEGG: aae:aq_053 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR: O66465 Phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-trans ferase; PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_005510909.1	COGs: COG1522 Transcriptional regulators; InterPro IPR019888; KEGG: pmx:PERMA_0311 transcriptional regulator, AsnC/Lrp family; SMART: Transcription regulator, AsnC-type; SPTR: A8UXD0 Putative transcriptional regulator, AsnC family protein
YP_005510910.1	COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: aae:aq_268 hypothetical protein; PFAM: protein of unknown function UPF0074; SPTR: A8UXB1 Putative uncharacterized protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator)
YP_005510911.1	COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR012833:IPR005144; KEGG: hya:HY04AAS1_1401 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone domain protein; PRIAM: Ribonucleoside-triphosphate reductase; SPTR: B4U5P6 Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase
YP_005510912.1	COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR005839:IPR006467:IPR013848:IPR007197:IPR 006638; KEGG: aae:aq_474 hypothetical protein; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: O66772 Putative methylthiotransferase aq_474; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family
YP_005510913.1	COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: aae:aq_355 hypothetical protein; PFAM: protein of unknown function DUF140; SPTR: O66681 Putative uncharacterized protein; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005510914.1	COGs: COG0082 Chorismate synthase; InterPro IPR000453:IPR020541; KEGG: aae:aq_081 chorismate synthase; PFAM: chorismate synthase; PRIAM: Chorismate synthase; SPTR: A8UVY6 Chorismate synthase; TIGRFAM: chorismate synthase; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_005510915.1	InterPro IPR001383; KEGG: hya:HY04AAS1_0071 ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: A8UVY5 S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_005510916.1	InterPro IPR019760; KEGG: gbm:Gbem_3031 hypothetical protein; SPTR: C1I3M4 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2325)
YP_005510917.1	COGs: COG3255 Putative sterol carrier protein; InterPro IPR003033:IPR016083; KEGG: aae:aq_026 hypothetical protein; PFAM: Sterol-binding domain protein; SPTR: O66445 Putative uncharacterized protein; PFAM: SCP-2 sterol transfer family
YP_005510918.1	COGs: COG0101 Pseudouridylate synthase; InterPro IPR001406:IPR020097:IPR020103:IPR020094:IPR 020095; KEGG: aae:aq_749 pseudouridine synthase I; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: A8UYA7 Pseudouridylate synthase; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_005510919.1	InterPro IPR001633; KEGG: dal:Dalk_3411 diguanylate phosphodiesterase; PFAM: EAL domain protein; SPTR: B8FLF3 Diguanylate phosphodiesterase; PFAM: EAL domain
YP_005510920.1	COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013026:IPR013105:IPR001440:IPR 011990; KEGG: saf:SULAZ_0559 fog:tpr repeat protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: C1DTW3 Fog:tpr repeat protein; PFAM: Tetratricopeptide repeat
YP_005510921.1	COGs: COG0541 Signal recognition particle GTPase; InterPro IPR004780:IPR013822:IPR000897:IPR004125:IPR 003593; KEGG: aae:aq_1720 signal recognition particle receptor protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; SPTR: A8UQV4 Signal recognition particle receptor protein; TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein
YP_005510922.1	KEGG: saf:SULAZ_0051 MjaVIP; SPTR: C1DXD6 MjaVIP
YP_005510923.1	COGs: COG0863 DNA modification methylase; InterPro IPR001091:IPR002941:IPR017985; KEGG: saf:SULAZ_0052 modification methylase MjaVI (N-4 cytosine-specificmethyltransferase MjaVI) (M.MjaVI); PFAM: DNA methylase N-4/N-6 domain protein; SPTR: C1DXD7 Modification methylase MjaVI (N-4 cytosine-specificmethyltransferase MjaVI) (M.MjaVI); PFAM: DNA methylase
YP_005510924.1	COGs: COG0492 Thioredoxin reductase; InterPro IPR000103:IPR013027:IPR005982:IPR008255; KEGG: hya:HY04AAS1_0622 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B4U848 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_005510925.1	COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR006662:IPR005746:IPR017936:IPR013766:IPR 012336:IPR017937:IPR012335; KEGG: aae:aq_1916 thioredoxin; PFAM: Thioredoxin domain; SPTR: A8USM8 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_005510926.1	InterPro IPR001845:IPR011991; KEGG: hya:HY04AAS1_0620 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: A8USM9 Transcriptional regulator, ArsR family protein; PFAM: Bacterial regulatory protein, arsR family
YP_005510927.1	COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR007543; KEGG: hya:HY04AAS1_0437 organic solvent tolerance protein; PFAM: Organic solvent tolerance protein; SPTR: A8UV29 Organic solvent tolerance protein
YP_005510928.1	COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056:IPR011060:IPR013785; KEGG: aae:aq_968 ribulose-5-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: O67098 Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; manually curated; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_005510929.1	COGs: COG0433 ATPase; InterPro IPR001736:IPR002789:IPR003593; KEGG: aae:aq_1852 hypothetical protein; PFAM: protein of unknown function DUF87; phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; AAA ATPase; SPTR: A8UV25 Putative uncharacterized protein; PFAM: Domain of unknown function DUF87; Phospholipase D Active site motif
YP_005510930.1	InterPro IPR000182:IPR016181; KEGG: aae:aq_1482 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: A8UXW1 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family
YP_005510931.1	COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR018323:IPR004564; KEGG: aae:aq_1483 hypothetical protein; PFAM: outer membrane lipoprotein carrier protein LolA; SPTR: A8UXW0 Putative uncharacterized protein; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA
YP_005510932.1	COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: aae:aq_1891 hypothetical protein; PFAM: peptidase M28; SPTR: A8UXV8 Putative uncharacterized protein; PFAM: Peptidase family M28
YP_005510933.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005785:IPR001544:IPR018300; KEGG: aae:aq_1893 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; SPTR: A8UXV7 Branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I
YP_005510934.1	COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: saf:SULAZ_0171 hypothetical protein; PFAM: protein of unknown function DUF52; SPTR: C1DXQ6 Putative uncharacterized protein; PFAM: Memo-like protein
YP_005510935.1	COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004635:IPR002142; KEGG: aae:aq_2080 proteinase IV; PFAM: peptidase S49; SPTR: A8UYE0 Proteinase IV; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type
YP_005510936.1	KEGG: aae:aq_267 hypothetical protein; SPTR: O66624 Uncharacterized protein aq_267
YP_005510937.1	COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: aae:aq_413 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: O66729 ABC transporter; manually curated; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_005510938.1	COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: pmx:PERMA_0352 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Q2BMJ3 TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor
YP_005510939.1	KEGG: sul:SYO3AOP1_1371 polyferredoxin-like protein; SPTR: B2V5N4 Polyferredoxin-like protein
YP_005510940.1	COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260:IPR003538; KEGG: ppd:Ppro_1467 TonB family protein; PFAM: Gram-negative tonB protein; SPTR: A1AP13 TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_005510941.1	COGs: COG3580 conserved hypothetical protein; InterPro IPR018709; KEGG: sus:Acid_0922 putative CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; SPTR: A8UV47 Putative uncharacterized protein; PFAM: CoA enzyme activase uncharacterised domain (DUF2229)
YP_005510942.1	COGs: COG0236 Acyl carrier protein; InterPro IPR003231:IPR009081:IPR006163:IPR006162; KEGG: aae:aq_1717a acyl carrier protein; PFAM: phosphopantetheine-binding; SPTR: O67611 Acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005510943.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568:IPR014030:IPR014031:IPR016039:IPR 018201:IPR016038; KEGG: aae:aq_1717 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase; SPTR: O67612 3-oxoacyl-[acyl-carrier-protein] synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2
YP_005510944.1	COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR011907:IPR001159:IPR000999; KEGG: aae:aq_946 RNase III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; PRIAM: Ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; SPTR: A8UXZ2 RNase III; TIGRFAM: ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial
YP_005510945.1	KEGG: aae:aq_2085 hypothetical protein; SPTR: O67858 Uncharacterized protein aq_2085
YP_005510946.1	InterPro IPR006171:IPR006154; KEGG: aae:aq_2086 hypothetical protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; SPTR: A8UUY1 Putative uncharacterized protein; PFAM: Toprim domain
YP_005510947.1	COGs: COG1059 Thermostable 8-oxoguanine DNA glycosylase; InterPro IPR012092:IPR003265:IPR011257; KEGG: aae:aq_251 N-glycosylase/DNA lyase; PFAM: HhH-GPD family protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; SPTR: A8USF5 N-glycosylase/DNA lyase
YP_005510948.1	COGs: COG0497 ATPase involved in DNA repair; InterPro IPR004604:IPR003395; KEGG: aae:aq_561 recombination protein RecN; PFAM: SMC domain protein; SPTR: O66834 DNA repair protein recN; TIGRFAM: DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_005510949.1	COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterPro IPR005294:IPR004100:IPR000194:IPR000793:IPR 018118:IPR020003; KEGG: aae:aq_679 F0F1 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SPTR: A8USR0 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit
YP_005510950.1	COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: aae:aq_1408 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: A8USQ9 Putative uncharacterized protein; PFAM: Protein of unknown function DUF72
YP_005510951.1	COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013026:IPR013105:IPR001440:IPR 011990; KEGG: aae:aq_2197 hypothetical protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: A8UQK8 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_005510952.1	COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR000983:IPR012902:IPR010054:IPR013545:IPR 001120; KEGG: aae:aq_418 general secretion pathway protein G; PFAM: type II secretion system protein G; SPTR: A8UYQ9 General secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain
YP_005510953.1	InterPro IPR012902:IPR001120; KEGG: noc:Noc_2891 general secretion pathway protein H; SPTR: A8UYQ8 Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005510954.1	InterPro IPR012902:IPR001120; KEGG: aae:aq_2118 hypothetical protein; SPTR: A8UYQ6 Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005510955.1	KEGG: aae:aq_1776 hypothetical protein; SPTR: A8UVS7 Putative uncharacterized protein
YP_005510956.1	COGs: COG2380 conserved hypothetical protein; InterPro IPR018977; KEGG: aae:aq_977 hypothetical protein; PFAM: NurA domain; SPTR: A8UU75 Putative uncharacterized protein; PFAM: NurA domain
YP_005510957.1	COGs: COG0679 permease; InterPro IPR004776; KEGG: aae:aq_1392 hypothetical protein; PFAM: Auxin Efflux Carrier; SPTR: A8UV34 Fatty acid/phospholipid synthesis protein; PFAM: Membrane transport protein
YP_005510958.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040; KEGG: pmx:PERMA_1747 UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1); PFAM: NAD-dependent epimerase/dehydratase; SPTR: C0QS65 UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1); PFAM: NAD dependent epimerase/dehydratase family
YP_005510959.1	COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; InterPro IPR001095:IPR011763:IPR020582; KEGG: aae:aq_1206 acetyl-CoA carboxylase alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; SPTR: A8UQK6 Acetyl-CoA carboxylase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
YP_005510960.1	COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300:IPR011330; KEGG: hya:HY04AAS1_0112 glycoside hydrolase family 57; PFAM: glycoside hydrolase family 57; SPTR: B4U6N6 Glycoside hydrolase family 57; PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF3536)
YP_005510961.1	COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterPro IPR000185:IPR014018:IPR011115:IPR011130:IPR 011116; KEGG: aae:aq_1870 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SPTR: O67718 Protein translocase subunit secA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_005510962.1	COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: nma:NMA0199 putative UDP-N-acetyl-D-glucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: A6PV73 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_005510963.1	KEGG: bte:BTH_II0344 putative lipoprotein; SPTR: Q2T8F5 Lipoprotein, putative
YP_005510964.1	KEGG: dtu:Dtur_1455 hypothetical protein; SPTR: B8E0Z2 Putative uncharacterized protein
YP_005510965.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: dtu:Dtur_1454 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: B8E0Z1 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_005510966.1	KEGG: hypothetical protein; SPTR: A9YVX5 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583
YP_005510967.1	InterPro IPR019825; KEGG: dtu:Dtur_1451 hypothetical protein; SPTR: B8E0Y8 Putative uncharacterized protein
YP_005510968.1	KEGG: mta:Moth_1896 hypothetical protein; SPTR: Q2RH93 Putative uncharacterized protein
YP_005510969.1	COGs: COG0854 Pyridoxal phosphate biosynthesis protein; InterPro IPR004569:IPR013785; KEGG: aae:aq_1423 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: O67417 Pyridoxine 5'-phosphate synthase; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase
YP_005510970.1	KEGG: aae:aq_1201 hypothetical protein; SPTR: A8UY25 Putative uncharacterized protein
YP_005510971.1	COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385:IPR017853:IPR013781; KEGG: aae:aq_723 4-alpha-glucanotransferase (amylomaltase); PFAM: glycoside hydrolase family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: Q1Q1C3 Strongly similar to 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase
YP_005510972.1	KEGG: aae:aq_1241 hypothetical protein; SPTR: A8UY28 Putative uncharacterized protein
YP_005510973.1	COGs: COG2862 membrane protein; InterPro IPR005134; KEGG: dev:DhcVS_1409 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q3ZVZ7 Putative uncharacterized protein; PFAM: Uncharacterized protein family, UPF0114
YP_005510974.1	COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: aae:aq_579 polypeptide deformylase; PFAM: formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: O66847 Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_005510975.1	KEGG: csc:Csac_2605 transposase, putative; SPTR: A4XMP2 Transposase, putative; TIGRFAM: transposase, putative, N-terminal domain
YP_005510976.1	KEGG: min:Minf_0043 hypothetical protein; SPTR: Q2HX23 Putative uncharacterized protein orf85
YP_005510977.1	COGs: COG3256 Nitric oxide reductase large subunit; InterPro IPR000883; KEGG: min:Minf_0042 nitric-oxide reductase subunit B; PRIAM: Nitric-oxide reductase; SPTR: Q2HX24 Nitric oxide reductase cytochrome b subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_005510978.1	InterPro IPR009056; KEGG: min:Minf_0041 nitric-oxide reductase subunit C; SPTR: Q2HX25 Nitric oxide reductase cytochrome c subunit; PFAM: Cytochrome c
YP_005510979.1	COGs: COG1333 ResB protein required for cytochrome c biosynthesis; InterPro IPR007816; KEGG: aae:aq_2082 hypothetical protein; PFAM: ResB family protein; SPTR: A8UT67 Putative uncharacterized protein; PFAM: ResB-like family
YP_005510980.1	KEGG: aae:aq_2140 hypothetical protein; SPTR: O67897 Putative uncharacterized protein
YP_005510981.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014021:IPR001650:IPR006935:IPR014001; KEGG: pmo:Pmob_1535 helicase domain-containing protein; PFAM: helicase domain protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicase; SPTR: A9BGJ6 Helicase domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain
YP_005510982.1	COGs: COG1002 Type II restriction enzyme methylase subunits; InterPro IPR011462:IPR002052; KEGG: hya:HY04AAS1_1423 hypothetical protein; PFAM: protein of unknown function DUF1568; SPTR: B4U5R8 Putative uncharacterized protein; PFAM: Transposase IS200 like; Eco57I restriction endonuclease
YP_005510984.1	COGs: COG4422 Bacteriophage protein gp37; InterPro IPR011101; KEGG: rca:Rcas_0327 Gp37Gp68 family protein; PFAM: Gp37Gp68 family protein; SPTR: B6AS61 Putative phage protein Gp37/Gp68; PFAM: Phage protein Gp37/Gp68
YP_005510985.1	COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: dth:DICTH_1832 nucleotidyltransferase; PFAM: DNA polymerase beta domain protein region; SPTR: B5YBB5 Nucleotidyltransferase; PFAM: Nucleotidyltransferase domain
YP_005510986.1	COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: tle:Tlet_1463 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: A8F785 Putative uncharacterized protein; PFAM: Protein of unknown function DUF86
YP_005510987.1	KEGG: aas:Aasi_0589 hypothetical protein; SPTR: Q1Q2B6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2851)
YP_005510988.1	COGs: COG0525 Valyl-tRNA synthetase; InterPro IPR019754:IPR002303:IPR002300:IPR013155:IPR 019499:IPR009080:IPR009008:IPR010978:IPR001412:IPR014729; KEGG: hya:HY04AAS1_1214 valyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: B4U9T8 Valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: valyl-tRNA synthetase
YP_005510989.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR011912:IPR001509:IPR016040; KEGG: aae:aq_344 ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8US79 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase
YP_005510990.1	COGs: COG0548 Acetylglutamate kinase; InterPro IPR011148:IPR001057:IPR004662:IPR001048; KEGG: aae:aq_2068 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: O67848 Acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_005510991.1	KEGG: hya:HY04AAS1_0416 hypothetical protein; SPTR: B4U7J5 Putative uncharacterized protein
YP_005510992.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107:IPR002104:IPR011010:IPR010998:IPR 013762; KEGG: aae:aq_1137 hypothetical protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: A8USU5 Putative uncharacterized protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005510993.1	COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR002649:IPR016009; KEGG: aae:aq_1489 tRNA guanine-N1 methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: A8USU7 tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_005510994.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: aae:aq_974 beta lactamase precursor; SPTR: O67103 Beta lactamase; PFAM: Metallo-beta-lactamase superfamily
YP_005510995.1	COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR005839:IPR005840:IPR002792:IPR013848:IPR 007197:IPR006638:IPR013785; KEGG: aae:aq_849 hypothetical protein; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: O67016 Ribosomal protein S12 methylthiotransferase rimO; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family
YP_005510996.1	COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: aae:aq_1679 C-terminal fumarate hydratase, class I; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: O67590 C-terminal fumarate hydratase, class I; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region
YP_005510997.1	COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321:IPR001482:IPR003593; KEGG: aae:aq_745 twitching motility protein PilT; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: A8URR1 Twitching motility protein PilT; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_005510998.1	COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004:IPR018076; KEGG: aae:aq_747 fimbrial assembly protein PilC; PFAM: Type II secretion system F domain; SPTR: A8URR2 Fimbrial assembly protein PilC; PFAM: Bacterial type II secretion system protein F domain
YP_005510999.1	COGs: COG0012 GTPase probable translation factor; InterPro IPR004396:IPR006073:IPR002917:IPR013029:IPR 012676:IPR012675; KEGG: aae:aq_609 GTP-dependent nucleic acid-binding protein EngD; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related; SPTR: A8UU40 Putative uncharacterized protein; TIGRFAM: GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_005511000.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sul:SYO3AOP1_1197 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: C4FJT7 Glycosyl transferase, group 1 family; PFAM: Glycosyl transferases group 1
YP_005511001.1	COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509:IPR011330; KEGG: sul:SYO3AOP1_1196 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: B2VA34 Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase
YP_005511002.1	COGs: COG0515 Serine/threonine protein kinase; InterPro IPR000719:IPR017442:IPR020635:IPR002290:IPR 011009:IPR017441; KEGG: aae:aq_576 Ser/thr protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A8UT78 Ser/thr protein kinase; PFAM: Protein kinase domain
YP_005511003.1	COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: aae:aq_1145 1,3 propanediol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: A8UXW7 1,3 propanediol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase
YP_005511004.1	COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: aae:aq_250 hypothetical protein; PFAM: zinc finger DksA/TraR C4-type; SPTR: O66611 Uncharacterized protein aq_250; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA
YP_005511005.1	InterPro IPR013802; KEGG: aae:aq_592 hypothetical protein; PFAM: Formiminotransferase domain protein; SPTR: O66854 Putative uncharacterized protein; PFAM: Formiminotransferase domain
YP_005511006.1	COGs: COG0372 Citrate synthase; InterPro IPR016141:IPR002020:IPR016142; KEGG: hya:HY04AAS1_1379 citrate synthase; PFAM: Citrate synthase; SPTR: Q75VX1 Citryl-CoA lyase; PFAM: Citrate synthase
YP_005511007.1	InterPro IPR019628; KEGG: tth:TTC1114 hypothetical protein; PFAM: Protein of unknown function DUF2495; SPTR: Q72IL8 Putative uncharacterized protein; PFAM: Phosphate-starvation-inducible E
YP_005511008.1	COGs: COG0460 Homoserine dehydrogenase; InterPro IPR016204:IPR005106:IPR001342:IPR002912:IPR 019811:IPR016040; KEGG: aae:aq_1812 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; SPTR: O67677 Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain
YP_005511009.1	COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR002825; KEGG: aae:aq_814 hypothetical protein; PFAM: protein of unknown function DUF114; SPTR: O66996 Putative uncharacterized protein; PFAM: Serine dehydrogenase proteinase
YP_005511010.1	COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR003593:IPR020568; KEGG: aae:aq_552 DNA repair protein RadA; SMART: AAA ATPase; SPTR: A8UXH3 DNA repair protein radA; TIGRFAM: DNA repair protein RadA; PFAM: KaiC; TIGRFAM: DNA repair protein RadA
YP_005511011.1	InterPro IPR007167:IPR008988; KEGG: gem:GM21_3767 FeoA family protein; PFAM: FeoA family protein; SPTR: A8UTN9 Putative uncharacterized protein; PFAM: FeoA domain
YP_005511012.1	COGs: COG0370 Fe2+ transport system protein B; InterPro IPR006073:IPR002917:IPR011619:IPR011642:IPR 011640:IPR005225:IPR003373; KEGG: aae:aq_1255 ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; nucleoside recognition domain protein; Ferrous iron transport B domain protein; SPTR: A8UTN7 Ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain
YP_005511013.1	COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004:IPR018076; KEGG: aae:aq_1285 fimbrial assembly protein PilC2; PFAM: Type II secretion system F domain; SPTR: A8UVK2 Fimbrial assembly protein PilC2; PFAM: Bacterial type II secretion system protein F domain
YP_005511014.1	COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR018529:IPR013785:IPR000644:IPR001093:IPR 015875:IPR005990; KEGG: aae:aq_2023 inosine monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; PRIAM: IMP dehydrogenase; SMART: CBS domain containing protein; SPTR: O67820 Inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_005511015.1	COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR003772; KEGG: aae:aq_1103 hypothetical protein; PFAM: protein of unknown function DUF177; SPTR: O67188 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1399
YP_005511016.1	COGs: COG0391 conserved hypothetical protein; InterPro IPR002882:IPR020845:IPR010119; KEGG: aae:aq_778 hypothetical protein; PFAM: protein of unknown function UPF0052 and CofD; SPTR: A8URT0 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related
YP_005511017.1	COGs: COG0029 Aspartate oxidase; InterPro IPR013027:IPR003953:IPR005288:IPR015939; KEGG: aae:aq_777 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: A8URS9 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase
YP_005511018.1	KEGG: vpa:VPA0727 putative nonspecific tight adherence protein TadD
YP_005511019.1	COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: aae:aq_314 hypothetical protein; PFAM: phosphatidylglycerophosphatase A; SPTR: A8UVM6 Putative uncharacterized protein; PFAM: Phosphatidylglycerophosphatase A
YP_005511020.1	InterPro IPR004664; KEGG: aae:aq_453 hypothetical protein; PFAM: ribonuclease BN; SPTR: O66760 Uncharacterized protein aq_453; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_005511021.1	COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR003739:IPR007197:IPR006638; KEGG: aae:aq_454 hypothetical protein; PFAM: Radical SAM domain protein; PRIAM: Lysine 2,3-aminomutase; SMART: Elongator protein 3/MiaB/NifB; SPTR: O66761 Uncharacterized kamA family protein aq_454; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein
YP_005511022.1	COGs: COG0373 Glutamyl-tRNA reductase; InterPro IPR000343:IPR016040:IPR015895:IPR006151:IPR 018214; KEGG: aae:aq_1279 glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; SPTR: A8UYI6 Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; TIGRFAM: glutamyl-tRNA reductase
YP_005511023.1	InterPro IPR019887:IPR011008; KEGG: hya:HY04AAS1_0684 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type-like; SPTR: A8UYI5 Putative uncharacterized protein; manually curated; PFAM: AsnC family
YP_005511024.1	SPTR: A8UYI3 Putative uncharacterized protein
YP_005511025.1	COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR001986:IPR005750:IPR013792; KEGG: aae:aq_1281 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: A8UYI2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_005511026.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068:IPR008978; KEGG: hya:HY04AAS1_0735 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: A8UYI0 Small heat shock protein (Class I) (Fragment); PFAM: Hsp20/alpha crystallin family
YP_005511027.1	COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: pmx:PERMA_0323 pyrazinamidase/nicotinamidase; PFAM: isochorismatase hydrolase; PRIAM: Nicotinamidase; SPTR: A8UXU4 Pyrazinamidase/nicotinamidase; PFAM: Isochorismatase family
YP_005511028.1	COGs: COG1489 DNA-binding protein stimulates sugar fermentation; InterPro IPR005224; KEGG: aae:aq_057 sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; SPTR: A8UXU6 Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein
YP_005511029.1	KEGG: saf:SULAZ_1272 gliding motility protein; SPTR: C1DVV4 Gliding motility protein; PFAM: Ras family
YP_005511030.1	KEGG: saf:SULAZ_1273 hypothetical protein; SPTR: C1DVV5 Putative uncharacterized protein
YP_005511031.1	InterPro IPR016024; KEGG: saf:SULAZ_1273 hypothetical protein; SPTR: C1DVV5 Putative uncharacterized protein
YP_005511032.1	COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015:IPR019772; KEGG: sul:SYO3AOP1_0845 ferrochelatase; PFAM: ferrochelatase; SPTR: A8UVP5 Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_005511033.1	COGs: COG1196 Chromosome segregation ATPase; InterPro IPR003395:IPR010935:IPR017871:IPR011891; KEGG: aae:aq_629 chromosome assembly protein; PFAM: SMC domain protein; SMCs flexible hinge domain protein; SPTR: A8UUA2 Citrate synthase; TIGRFAM: chromosome segregation protein SMC; PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, primarily archaeal type
YP_005511034.1	COGs: COG1980 fructose 1 6-bisphosphatase; InterPro IPR002803; KEGG: aae:aq_1790 hypothetical protein; PFAM: protein of unknown function DUF100; SPTR: A8UU24 Putative uncharacterized protein; PFAM: Fructose-1,6-bisphosphatase
YP_005511035.1	KEGG: aae:aq_197 hypothetical protein; SPTR: A8UUD9 Putative uncharacterized protein
YP_005511036.1	COGs: COG1503 Peptide chain release factor 1 (eRF1); KEGG: aae:aq_199 hypothetical protein; SPTR: A8UUE0 Putative uncharacterized protein; PFAM: eRF1 domain 3
YP_005511037.1	COGs: COG1432 conserved hypothetical protein; InterPro IPR002790; KEGG: aae:aq_200 hypothetical protein; PFAM: protein of unknown function DUF88; SPTR: A8UUE1 Putative uncharacterized protein; PFAM: Protein of unknown function DUF88
YP_005511038.1	COGs: COG0196 FAD synthase; InterPro IPR002606:IPR014729:IPR015865:IPR015864:IPR 004821; KEGG: aae:aq_139 riboflavin kinase; PFAM: FAD synthetase; Riboflavin kinase; SPTR: O66535 Riboflavin kinase; TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; cytidyltransferase-related domain
YP_005511039.1	KEGG: hya:HY04AAS1_1561 hypothetical protein; SPTR: A8UW41 Putative uncharacterized protein
YP_005511040.1	COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR020441:IPR002078:IPR000014:IPR013656:IPR 002197:IPR003593:IPR009057; KEGG: hya:HY04AAS1_0103 PAS modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: B4U6M7 PAS modulated sigma54 specific transcriptional regulator, Fis family; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold
YP_005511041.1	COGs: COG3255 Putative sterol carrier protein; InterPro IPR003033:IPR016083; KEGG: aae:aq_090 hypothetical protein; PFAM: Sterol-binding domain protein; SPTR: O66500 Putative uncharacterized protein; PFAM: SCP-2 sterol transfer family
YP_005511042.1	COGs: COG4831 conserved hypothetical protein; InterPro IPR018685; KEGG: aae:aq_088 hypothetical protein; PFAM: Protein of unknown function DUF2173; SPTR: O66499 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2173)
YP_005511043.1	COGs: COG4831 conserved hypothetical protein; InterPro IPR018685; KEGG: aae:aq_087 hypothetical protein; PFAM: Protein of unknown function DUF2173; SPTR: O66498 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2173)
YP_005511044.1	InterPro IPR012312; KEGG: aae:aq_918 hypothetical protein; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: O67063 Putative uncharacterized protein; PFAM: Hemerythrin HHE cation binding domain
YP_005511045.1	KEGG: aae:aq_917 hypothetical protein; SPTR: O67062 Uncharacterized protein aq_917
YP_005511046.1	COGs: COG3158 K+ transporter; InterPro IPR003855; KEGG: sul:SYO3AOP1_1248 K potassium transporter; PFAM: K potassium transporter; SPTR: B2VA86 K potassium transporter; PFAM: K+ potassium transporter
YP_005511047.1	COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR002312:IPR012340:IPR006195:IPR004365:IPR 004364:IPR004115:IPR004524:IPR016027; KEGG: aae:aq_1677 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: O67589 Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_005511048.1	COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836:IPR005904; KEGG: aae:aq_544 hypoxanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: A8UTD9 Hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_005511049.1	COGs: COG0141 Histidinol dehydrogenase; InterPro IPR012131:IPR001692:IPR016161; KEGG: aae:aq_782 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; PRIAM: Histidinol dehydrogenase; SPTR: O66976 Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_005511050.1	KEGG: hya:HY04AAS1_0892 hypothetical protein; SPTR: A8UWW3 Putative uncharacterized protein
YP_005511051.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR015421:IPR015422:IPR004839:IPR004838:IPR 019881:IPR015424; KEGG: aae:aq_273 LL-diaminopimelate aminotransferase; PFAM: aminotransferase class I and II; SPTR: O66630 LL-diaminopimelate aminotransferase; TIGRFAM: LL-diaminopimelate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase
YP_005511052.1	InterPro IPR000644; KEGG: aae:aq_040 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: A8UWT6 Glycine dehydrogenase subunit 2; PFAM: CBS domain; EAL-domain associated signalling protein domain
YP_005511053.1	COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: aae:aq_1023 acetoin utilization protein; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: O67135 Acetoin utilization protein; PFAM: Histone deacetylase domain
YP_005511054.1	COGs: COG0151 Phosphoribosylamine-glycine ligase; InterPro IPR013817:IPR013815:IPR013816:IPR011761:IPR 020562:IPR020561:IPR020560:IPR020559:IPR000115:IPR016185:I PR011054; KEGG: aae:aq_742 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: A8UU63 Phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_005511055.1	COGs: COG0628 permease; InterPro IPR002549; KEGG: aae:aq_740 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: A8UU65 Putative uncharacterized protein; PFAM: Domain of unknown function DUF20
YP_005511056.1	InterPro IPR011990:IPR019734:IPR013026:IPR001440; KEGG: mbn:Mboo_1172 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: A7I7H9 TPR repeat-containing protein; PFAM: Tetratricopeptide repeat
YP_005511057.1	COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR019999:IPR005801:IPR015890; KEGG: aae:aq_1144 p-aminobenzoate synthetase; PFAM: Chorismate binding-like; SPTR: O67217 p-aminobenzoate synthetase; PFAM: chorismate binding enzyme
YP_005511058.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: tye:THEYE_A1969 aminodeoxychorismate lyase; PFAM: aminotransferase class IV; SPTR: B5YIC8 Aminodeoxychorismate lyase; PFAM: Aminotransferase class IV
YP_005511059.1	COGs: COG0557 Exoribonuclease R; InterPro IPR012340:IPR003029:IPR013223:IPR001900:IPR 011805:IPR004476:IPR011129:IPR016027; KEGG: aae:aq_2046 VacB/RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; SPTR: O67834 Ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: RNB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases
YP_005511060.1	COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR016040:IPR014027:IPR001732:IPR014026:IPR 017476:IPR008927; KEGG: aae:aq_024 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: O66443 Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_005511061.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: aae:aq_1509 oligopeptide transport system permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A8UY59 Oligopeptide transport system permease; PFAM: Binding-protein-dependent transport system inner membrane component
YP_005511062.1	COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR012165:IPR017927:IPR008333:IPR001433:IPR 019480:IPR017938; KEGG: aae:aq_1305 dihydroorotate dehydrogenase electron transfer subunit; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: A8UV91 ATP-dependent DNA ligase; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_005511063.1	COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783:IPR017938; KEGG: aae:aq_1707 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: O67604 Riboflavin synthase alpha chain; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_005511064.1	COGs: COG3434 signal transduction protein containing EAL and modified HD-GYP domains; InterPro IPR014408:IPR001633:IPR013976; KEGG: aae:aq_2044 hypothetical protein; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein; SPTR: A8UWG8 Putative uncharacterized protein; PFAM: EAL domain; HDOD domain
YP_005511065.1	COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541:IPR017562; KEGG: aae:aq_2043 cytochrome c biogenesis protein; PFAM: cytochrome c assembly protein; SPTR: A8UWG7 Cytochrome c biogenesis protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB
YP_005511066.1	COGs: COG0359 Ribosomal protein L9; InterPro IPR020070:IPR020069:IPR020594:IPR009027; KEGG: aae:aq_2042 ribosomal protein L09; PFAM: Ribosomal protein L9-like; SPTR: A8UWG6 Ribosomal protein L09; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_005511067.1	COGs: COG0238 Ribosomal protein S18; InterPro IPR001648; KEGG: hya:HY04AAS1_0449 ribosomal protein S18; PFAM: ribosomal protein S18; SPTR: B4U7M8 Ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_005511068.1	COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR012340:IPR000424:IPR011344:IPR016027; KEGG: aae:aq_064 single stranded DNA-binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: A8UWG2 Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_005511069.1	COGs: COG0360 Ribosomal protein S6; InterPro IPR014717:IPR020814:IPR000529; KEGG: aae:aq_063 ribosomal protein S06; PFAM: Ribosomal protein S6, bacterial-like; SPTR: A8UWG1 Ribosomal protein S06; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_005511070.1	COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR016181:IPR000182; KEGG: aae:aq_1359 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: A8UWB1 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family
YP_005511071.1	COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR002298:IPR002562:IPR001098:IPR019760:IPR 012337; KEGG: aae:aq_1967 DNA polymerase I (PolI); PFAM: DNA-directed DNA polymerase; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase; 3'-5' exonuclease; SPTR: A8UVF5 DNA polymerase I; PFAM: 3'-5' exonuclease; DNA polymerase family A
YP_005511072.1	COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; KEGG: pmm:PMM0771 putative 6-phosphogluconolactonase (DevB, Pgl); SPTR: A8UQU5 50S ribosomal protein L13; TIGRFAM: 6-phosphogluconolactonase
YP_005511073.1	COGs: COG0364 Glucose-6-phosphate 1-dehydrogenase; InterPro IPR001282:IPR016040:IPR019796; KEGG: dtu:Dtur_0054 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; PRIAM: Glucose-6-phosphate dehydrogenase; SPTR: A8UQU6 Glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_005511074.1	COGs: COG1023 6-phosphogluconate dehydrogenase; InterPro IPR006183:IPR016040:IPR013328:IPR006115:IPR 006114:IPR004849:IPR008927; KEGG: aae:aq_498 6-phosphogluconate dehydrogenase-like protein; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein; SPTR: A8UQU7 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating)
YP_005511075.1	InterPro IPR009056:IPR003088; KEGG: msl:Msil_3147 cytochrome c class I; PFAM: cytochrome c class I; SPTR: B8EMC8 Cytochrome c class I; PFAM: Cytochrome c
YP_005511076.1	KEGG: cdl:CDR20291_2344 putative ATP-dependent helicase; SPTR: Q182D7 Probable ATP-dependent helicase
YP_005511077.1	COGs: COG3427 conserved hypothetical protein; InterPro IPR010419; KEGG: hoh:Hoch_4562 carbon monoxide dehydrogenase subunit G; PFAM: carbon monoxide dehydrogenase subunit G; SPTR: D0LQ16 Carbon monoxide dehydrogenase subunit G; PFAM: Carbon monoxide dehydrogenase subunit G (CoxG)
YP_005511078.1	COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: dge:Dgeo_0385 hypothetical protein; PFAM: protein of unknown function DUF182; SPTR: C1XU58 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; PFAM: XdhC and CoxI family
YP_005511079.1	COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterPro IPR016167:IPR016169:IPR005107:IPR016166:IPR 002346; KEGG: ape:APE_2219 aldehyde dehydrogenase, middle subunit; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; SPTR: Q9Y9R9 Aldehyde dehydrogenase, middle subunit; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain
YP_005511080.1	COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR000674:IPR008274; KEGG: ape:APE_2216.1 aldehyde dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: D1C3L7 Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: carbon-monoxide dehydrogenase, large subunit
YP_005511081.1	COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR012675:IPR001041:IPR002888; KEGG: sti:Sthe_1398 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: D1C3L6 (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain
YP_005511082.1	COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531:IPR010917; KEGG: ent:Ent638_2099 TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: C0Q4P2 Probable TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor
YP_005511083.1	InterPro IPR001638; KEGG: min:Minf_0995 periplasmic binding protein, involved in methanol oxidation; SMART: extracellular solute-binding protein family 3; SPTR: B3DUP7 Periplasmic binding protein, involved in methanol oxidation; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005511084.1	COGs: COG3391 conserved hypothetical protein; InterPro IPR015943:IPR011044; KEGG: mei:Msip34_0162 40-residue YVTN family beta-propeller repeat protein; SPTR: C6X8E1 40-residue YVTN family beta-propeller repeat protein; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat
YP_005511085.1	COGs: COG4993 Glucose dehydrogenase; InterPro IPR011047:IPR019551:IPR002372:IPR019556:IPR 017512:IPR018391; KEGG: min:Minf_0992 methanol dehydrogenase large subunit protein; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; SPTR: B3DUP4 Methanol dehydrogenase large subunit protein; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family
YP_005511086.1	KEGG: hypothetical protein; SPTR: B3RJ70 Putative uncharacterized protein
YP_005511087.1	KEGG: sul:SYO3AOP1_1346 hypothetical protein; SPTR: C4FLD7 Putative uncharacterized protein
YP_005511088.1	KEGG: sul:SYO3AOP1_1345 conserved hypothetical lipoprotein; SPTR: B2V5K9 Conserved hypothetical lipoprotein
YP_005511089.1	KEGG: sul:SYO3AOP1_1342 hypothetical protein; SPTR: B2V5K6 Putative uncharacterized protein
YP_005511090.1	KEGG: sul:SYO3AOP1_1341 hypothetical protein; SPTR: D0GLJ9 Transposase, IS4 family (Fragment)
YP_005511092.1	COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: tye:THEYE_A0768 leu/ile/val-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: A8UVG6 Putative branched-chain amino acid transporter substrate-binding protein; PFAM: Receptor family ligand binding region
YP_005511093.1	COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tye:THEYE_A0767 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: A8UVG7 Putative high-affinity branched-chain amino acid transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component
YP_005511094.1	COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: tye:THEYE_A0766 high-affinity branched-chain amino acid transport system permease protein LivM; PFAM: inner-membrane translocator; SPTR: A8UVG8 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component
YP_005511095.1	COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tne:Tneu_0546 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8UVG9 Branched-chain amino acid transport ATP-binding protein; PFAM: ABC transporter
YP_005511096.1	COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tye:THEYE_A0764 high-affinity branched-chain amino acid transport, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8UVH1 Branched-chain amino acid transport ATP-binding protein; PFAM: ABC transporter
YP_005511097.1	COGs: COG0797 Lipoprotein; InterPro IPR005132:IPR012997:IPR009009; KEGG: aae:aq_1370 rare lipoprotein A; PFAM: Rare lipoprotein A; SPTR: O67382 Rare lipoprotein A; TIGRFAM: rare lipoprotein A; manually curated; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A
YP_005511098.1	COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR007197; KEGG: aae:aq_1528 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: O67488 Putative uncharacterized protein; manually curated; PFAM: Radical SAM superfamily
YP_005511099.1	COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: aae:aq_1527 hypothetical protein; PFAM: PSP1 domain protein; SPTR: A8URT2 Putative uncharacterized protein; PFAM: PSP1 C-terminal conserved region
YP_005511100.1	COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR012285:IPR017896:IPR001450:IPR017900; KEGG: aae:aq_1375 NADH dehydrogenase I chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8UR10 NADH dehydrogenase I chain I
YP_005511101.1	COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: aae:aq_1377 NADH dehydrogenase I chain J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: A8UR09 NADH dehydrogenase I chain J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_005511102.1	COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: aae:aq_1378 NADH dehydrogenase I chain K; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: A8UR08 NADH dehydrogenase I chain K; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_005511103.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003916:IPR018393:IPR001516:IPR001750:IPR 003945; KEGG: aae:aq_1379 NADH dehydrogenase I chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: A8UR20 NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_005511104.1	COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR003918:IPR001750:IPR010227; KEGG: aae:aq_1382 NADH dehydrogenase I chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A8UR18 NADH dehydrogenase I chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_005511105.1	COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR003916:IPR001750:IPR010096; KEGG: aae:aq_1383 NADH dehydrogenase I chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A8UR17 NADH dehydrogenase I chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_005511106.1	COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: aae:aq_1385 NADH dehydrogenase I chain A; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: A8UR16 NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_005511107.1	COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR001268:IPR001135:IPR014029; KEGG: aae:aq_551 NADH dehydrogenase I chain D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: A8UR14 NADH dehydrogenase I chain D; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit
YP_005511108.1	COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR001694:IPR018086; KEGG: hya:HY04AAS1_0758 NADH dehydrogenase (quinone); PFAM: respiratory-chain NADH dehydrogenase subunit 1; PRIAM: NADH dehydrogenase (quinone); SPTR: A8UR12 NADH dehydrogenase I chain H; PFAM: NADH dehydrogenase
YP_005511109.1	COGs: COG0107 Imidazoleglycerol-phosphate synthase; InterPro IPR013785:IPR006062:IPR018313:IPR004651:IPR 011060; KEGG: aae:aq_181 imidazole glycerol phosphate synthase subunit HisF; PFAM: histidine biosynthesis protein; SPTR: O66567 Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_005511110.1	COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); InterPro IPR003594:IPR013507:IPR014762:IPR014763:IPR 020568; KEGG: aae:aq_1578 DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; SPTR: O67518 DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL
YP_005511111.1	COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135:IPR013785:IPR001295:IPR005720; KEGG: aae:aq_046 dihydroorotate dehydrogenase 1B; PFAM: dihydroorotate oxidase; SPTR: O66461 Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein
YP_005511112.1	COGs: COG0104 Adenylosuccinate synthase; InterPro IPR001114:IPR018220; KEGG: aae:aq_1290 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: adenylosuccinate synthetase; SPTR: A8URI9 Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_005511113.1	COGs: COG2262 GTPase; InterPro IPR016496:IPR006073:IPR002917:IPR005225; KEGG: aae:aq_1908 GTP-binding protein HflX; PFAM: GTP-binding protein HSR1-related; SPTR: A8USN5 GTP-binding protein HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain
YP_005511114.1	COGs: COG1923 Uncharacterized host factor I protein; InterPro IPR005001:IPR010920; KEGG: hya:HY04AAS1_1230 RNA chaperone Hfq; SPTR: A8USN4 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq
YP_005511115.1	KEGG: saf:SULAZ_0995 hypothetical protein; SPTR: C1DV31 Putative uncharacterized protein
YP_005511116.1	KEGG: saf:SULAZ_0994 hypothetical protein; SPTR: C1DV30 Putative uncharacterized protein
YP_005511117.1	COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR015421:IPR005814:IPR004636:IPR015424; KEGG: aae:aq_023 N-acetylornithine aminotransferase; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: A8UWB8 N-acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases
YP_005511118.1	COGs: COG0171 NAD synthase; InterPro IPR014445:IPR003010:IPR014729:IPR003694; KEGG: aae:aq_959 NAD synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: O67091 Probable glutamine-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; manually curated; PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase
YP_005511119.1	KEGG: hypothetical protein; SPTR: Q0G6Z5 Putative aminotransferase protein
YP_005511120.1	KEGG: mpt:Mpe_B0343 hypothetical protein; SPTR: B8KVM5 Putative uncharacterized protein
YP_005511121.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR003593; KEGG: pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: C0QPL5 General secretion pathway protein E (Type II traffic warden ATPase)(Cholera toxin secretion protein EpsE); PFAM: Type II/IV secretion system protein
YP_005511122.1	KEGG: hypothetical protein; SPTR: A2DUG2 Putative uncharacterized protein
YP_005511123.1	COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR001775:IPR001814:IPR005644:IPR004846; KEGG: dat:HRM2_30110 GspD2; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: A6PP67 Type II and III secretion system protein; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D
YP_005511124.1	COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR003959:IPR012763:IPR003593:IPR008921; KEGG: aae:aq_1855 DNA polymerase III gamma subunit; PFAM: AAA ATPase central domain protein; PRIAM: DNA-directed DNA polymerase; SMART: AAA ATPase; SPTR: O67707 DNA polymerase III gamma subunit; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunits gamma and tau
YP_005511125.1	KEGG: saf:SULAZ_0522 hypothetical protein; SPTR: A8UUZ9 Putative uncharacterized protein
YP_005511126.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: sdl:Sdel_2128 transglutaminase domain protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: A8UV37 Putative uncharacterized protein; PFAM: Transglutaminase-like superfamily
YP_005511127.1	COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR010075:IPR017926:IPR011698; KEGG: aae:aq_1105 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: O67190 Phosphoribosylformylglycinamidine synthase 1; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I
YP_005511128.1	COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component; InterPro IPR003850; KEGG: aae:aq_932a phosphoribosylformylglycinamidine (FGAM) synthase, PurS component; PFAM: phosphoribosylformylglycinamidine synthetase PurS; SPTR: A8UVW1 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein
YP_005511129.1	KEGG: hypothetical protein; SPTR: Q5CQT3 Putative uncharacterized protein
YP_005511130.1	COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR003509:IPR011335; KEGG: hya:HY04AAS1_1639 protein of unknown function UPF0102; PFAM: protein of unknown function UPF0102; SPTR: A8UQV9 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0102
YP_005511131.1	COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR011611:IPR002173:IPR011913; KEGG: aae:aq_565 ADP-heptose synthase; PFAM: PfkB domain protein; SPTR: A8UQW0 ADP-heptose synthase; TIGRFAM: rfaE bifunctional protein; PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I
YP_005511132.1	COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR002912:IPR018042:IPR005260:IPR 001341; KEGG: aae:aq_1152 aspartokinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: A8UQW2 Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase
YP_005511133.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683; KEGG: aae:aq_440 hypothetical protein; PFAM: oxidoreductase domain protein; SPTR: A8UXG7 Putative uncharacterized protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_005511134.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR003593:IPR009057; KEGG: pmx:PERMA_0513 nitrogen assimilation regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; SPTR: A8V246 Two component, sigma54 specific, transcriptional regulator, Fis family protein; PFAM: Sigma-54 interaction domain
YP_005511135.1	COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR014729:IPR005117:IPR006067:IPR003749:IPR 002500:IPR004511:IPR011798:IPR016155; KEGG: rmr:Rmar_2355 ferredoxin--nitrite reductase; PFAM: phosphoadenosine phosphosulfate reductase; nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; thiamineS protein; SPTR: D0MEK5 Ferredoxin--nitrite reductase; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: ThiS family; Nitrite and sulphite reductase 4Fe-4S domain; Phosphoadenosine phosphosulfate reductase family; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin)
YP_005511136.1	KEGG: svi:Svir_33730 uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides; SPTR: C3XG35 Flagellar assembly protein H
YP_005511137.1	COGs: COG0730 permease; InterPro IPR002781; KEGG: min:Minf_0617 predicted permease; PFAM: protein of unknown function DUF81; SPTR: B3E014 Predicted permease; PFAM: Sulfite exporter TauE/SafE
YP_005511138.1	COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR014777:IPR014776:IPR000878:IPR003043:IPR 006366; KEGG: sul:SYO3AOP1_0051 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Q3LGA4 Uroporphyrinogen III methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_005511139.1	COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase); InterPro IPR014729:IPR002650:IPR015947; KEGG: tth:TTC0307 sulfate adenylyltransferase; PFAM: ATP-sulfurylase; PRIAM: Sulfate adenylyltransferase; SPTR: B7AB26 Sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; TIGRFAM: ATP sulphurylase
YP_005511140.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR012999:IPR016156; KEGG: sto:ST1879 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q96ZF4 Dihydrolipoyl dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005511141.1	COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: aae:aq_1655 hypothetical protein; PFAM: 4-vinyl reductase 4VR; SPTR: A8UVQ3 Putative uncharacterized protein; PFAM: V4R domain; TIGRFAM: bacteriochlorophyll 4-vinyl reductase
YP_005511142.1	InterPro IPR011042:IPR001258; KEGG: rca:Rcas_3798 NHL repeat-containing protein; PFAM: NHL repeat containing protein; SPTR: A7NQJ1 NHL repeat containing protein
YP_005511143.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941:IPR001075; KEGG: chl:Chy400_2990 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; nitrogen-fixing NifU domain protein; SPTR: C6QQT8 Nitrogen-fixing NifU domain protein; PFAM: NifU-like domain; Rieske [2Fe-2S] domain
YP_005511144.1	InterPro IPR011990:IPR019734:IPR013026:IPR001440; KEGG: fra:Francci3_1074 hypothetical protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Q2JE36 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_005511145.1	KEGG: msm:MSMEG_2266 hypothetical protein; SPTR: A0QUM9 Putative uncharacterized protein
YP_005511146.1	COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: msm:MSMEG_2264 peptidase M52, hydrogen uptake protein; PFAM: peptidase M52 hydrogen uptake protein; SPTR: A7BI66 Ni,Fe-hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease
YP_005511147.1	COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: chl:Chy400_2995 nickel-dependent hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: A7BI65 Ni,Fe-hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase
YP_005511148.1	COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR006137; KEGG: chl:Chy400_2996 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: A7BI64 Ni,Fe-hydrogenase small subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA)
YP_005511149.1	InterPro IPR012440; KEGG: gwc:GWCH70_0463 protein of unknown function DUF1641; PFAM: protein of unknown function DUF1641; SPTR: C6QQU8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1641)
YP_005511150.1	InterPro IPR012440; KEGG: gtn:GTNG_0463 hypothetical protein; PFAM: protein of unknown function DUF1641; SPTR: Q5L2T7 Hypothetical conserved protein; PFAM: Protein of unknown function (DUF1641)
YP_005511151.1	InterPro IPR019613; KEGG: saf:SULAZ_0739 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: C1DUD7 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region
YP_005511152.1	KEGG: saf:SULAZ_0740 hypothetical protein; SPTR: C1DUD8 Putative uncharacterized protein
YP_005511153.1	KEGG: saf:SULAZ_0741 hypothetical protein; SPTR: C1DUD9 Putative uncharacterized protein
YP_005511154.1	COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: saf:SULAZ_0742 CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: C1DUE0 CbiM; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM
YP_005511155.1	KEGG: pmx:PERMA_0828 ABC type permease; SPTR: C0QPM0 ABC type permease
YP_005511156.1	COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: saf:SULAZ_0744 cobalt import ATP-binding protein CbiO 2; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8V3F4 ABC transporter-related protein; PFAM: ABC transporter
YP_005511157.1	COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: sul:SYO3AOP1_0895 peptide deformylase; PFAM: formylmethionine deformylase; SPTR: B2V9A0 Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_005511158.1	COGs: COG2716 Glycine cleavage system regulatory protein; InterPro IPR002912; KEGG: pmx:PERMA_0109 glycine cleavage system regulatory protein; PFAM: amino acid-binding ACT domain protein; SPTR: C0QT92 Glycine cleavage system regulatory protein; PFAM: ACT domain
YP_005511159.1	KEGG: hya:HY04AAS1_0986 hypothetical protein; SPTR: B4U961 Putative uncharacterized protein
YP_005511160.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR016040:IPR013328:IPR006115:IPR008927; KEGG: aae:aq_038 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: O66454 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005511161.1	COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170:IPR018054; KEGG: aae:aq_906 transcriptional regulator (PhoU-like); PFAM: PhoU family protein; SPTR: A8USU0 Transcriptional regulator (PhoU-like) protein; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_005511162.1	COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003594:IPR005467:IPR003660:IPR003661:IPR 009082; KEGG: aae:aq_905 histidine kinase sensor protein; PFAM: histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: A8USU1 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005511163.1	KEGG: aae:aq_904 hypothetical protein; SPTR: A8USU2 Putative uncharacterized protein
YP_005511164.1	KEGG: aae:aq_1324 hypothetical protein; SPTR: A8USU3 Putative uncharacterized protein
YP_005511165.1	COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: sul:SYO3AOP1_1123 transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; SPTR: A7BLI4 Transposase ISC1316; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; TIGRFAM: transposase, IS605 OrfB family, central region
YP_005511166.1	COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR001227:IPR014043:IPR004410:IPR016035:IPR 016036; KEGG: aae:aq_892 malonyl-CoA:acyl carrier protein transacylase; PFAM: Acyl transferase; SPTR: O67041 Malonyl-CoA:Acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_005511167.1	KEGG: saf:SULAZ_0952 putative transposase DNA-binding domain family; SPTR: C1DUY8 Putative transposase DNA-binding domain family
YP_005511168.1	COGs: COG1067 ATP-dependent protease; InterPro IPR001984:IPR008269:IPR020568; KEGG: pmx:PERMA_0008 peptidase S16, lon domain protein; PFAM: peptidase S16 lon domain protein; SPTR: C0QSZ1 Peptidase S16, lon domain protein; PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease
YP_005511169.1	COGs: COG0011 conserved hypothetical protein; InterPro IPR002767:IPR016198; KEGG: aae:aq_2067 hypothetical protein; PFAM: protein of unknown function DUF77; SPTR: O67847 Putative uncharacterized protein; PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106
YP_005511170.1	COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: aae:aq_775 hypothetical protein; PFAM: aminodeoxychorismate lyase; SPTR: A8UTF2 Putative uncharacterized protein; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein TIGR00247
YP_005511171.1	COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); InterPro IPR005227:IPR006641:IPR012337; KEGG: aae:aq_1498 hypothetical protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; SPTR: O67469 Putative Holliday junction resolvase; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250
YP_005511172.1	KEGG: hya:HY04AAS1_0914 hypothetical protein; SPTR: A8UTF4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892)
YP_005511173.1	COGs: COG4353 conserved hypothetical protein; InterPro IPR008304; KEGG: aae:aq_1966 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: O67778 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1122)
YP_005511174.1	COGs: COG0124 Histidyl-tRNA synthetase; InterPro IPR004516:IPR004154:IPR006195:IPR002314:IPR 015807; KEGG: aae:aq_122 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: A8UW82 Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_005511175.1	COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731:IPR013785; KEGG: aae:aq_2109 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: O67876 Delta-aminolevulinic acid dehydratase; PFAM: Delta-aminolevulinic acid dehydratase
YP_005511176.1	COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR013785:IPR002792:IPR013848:IPR007197:IPR 005839:IPR006463:IPR006638; KEGG: aae:aq_284 hypothetical protein; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: O66638 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family
YP_005511177.1	COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: aae:aq_283 hypothetical protein; PFAM: protein of unknown function DUF151; SPTR: A8URN5 Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG1259
YP_005511178.1	KEGG: aae:aq_935 hypothetical protein; SPTR: A8UW21 Putative uncharacterized protein
YP_005511179.1	COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: aae:aq_1853 hypothetical protein; PFAM: peptidase M50; SPTR: A8UT92 Putative uncharacterized protein; PFAM: Peptidase family M50
YP_005511180.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR002198:IPR016040:IPR011284; KEGG: aae:aq_1716 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: O67610 3-oxoacyl-[acyl-carrier-protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_005511181.1	COGs: COG0550 Topoisomerase IA; InterPro IPR000380:IPR013824:IPR013826:IPR006171:IPR 013497:IPR005733:IPR006154:IPR003601:IPR003602; KEGG: aae:aq_657 topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; SPTR: A8UWF0 DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_005511182.1	COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: aae:aq_534 ADP-ribosylglycohydrolase; PFAM: ADP-ribosylation/Crystallin J1; SPTR: A8USF8 ADP-ribosylglycohydrolase; PFAM: ADP-ribosylglycohydrolase
YP_005511183.1	COGs: COG1923 Uncharacterized host factor I protein; InterPro IPR001163:IPR005001:IPR010920; KEGG: aae:aq_108b host factor I; PFAM: Like-Sm ribonucleoprotein core; SPTR: A8USF7 Host factor I; TIGRFAM: RNA chaperone Hfq; PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq
YP_005511184.1	COGs: COG3411 Ferredoxin; InterPro IPR012335:IPR009737:IPR012336; KEGG: hya:HY04AAS1_1394 putative ferredoxin 2Fe-2S protein; PFAM: Sucraseferredoxin family protein; SPTR: A8USF6 Ferredoxin, 2Fe-2S; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_005511185.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR014017:IPR000212; KEGG: aae:aq_793 ATP-dependent DNA helicase REP; PFAM: UvrD/REP helicase; SPTR: O66983 ATP-dependent DNA helicase REP; PFAM: UvrD/REP helicase
YP_005511186.1	COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: sul:SYO3AOP1_1123 transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; SPTR: A7BLI4 Transposase ISC1316; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; TIGRFAM: transposase, IS605 OrfB family, central region
YP_005511187.1	KEGG: aae:aq_271 hypothetical protein; SPTR: A8UST2 Putative uncharacterized protein
YP_005511188.1	COGs: COG1811 Uncharacterized membrane protein possible Na+ channel or pump; InterPro IPR007563; KEGG: hya:HY04AAS1_0471 protein of unknown function DUF554; PFAM: protein of unknown function DUF554; SPTR: A8UST3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF554)
YP_005511189.1	COGs: COG3259 Coenzyme F420-reducing hydrogenase alpha subunit; InterPro IPR001501:IPR018194; KEGG: pmx:PERMA_0690 nickel-dependent hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: C0QP83 Nickel-dependent hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase
YP_005511190.1	COGs: COG1941 Coenzyme F420-reducing hydrogenase gamma subunit; InterPro IPR006137; KEGG: saf:SULAZ_0894 putative [NiFe] hydrogenase, delta subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: C1DUT4 Putative [NiFe] hydrogenase, delta subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_005511191.1	COGs: COG0218 GTPase; InterPro IPR001806:IPR002917:IPR019987:IPR005225; KEGG: aae:aq_1815 hypothetical protein; PFAM: GTP-binding protein HSR1-related; SPTR: A8URN8 Putative uncharacterized protein; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain
YP_005511192.1	COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR004101:IPR018109:IPR001645; KEGG: aae:aq_2045 folylpolyglutamate synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; PRIAM: Tetrahydrofolate synthase; SPTR: O67833 Folylpolyglutamate synthetase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_005511193.1	COGs: COG1278 Cold shock protein; InterPro IPR012156:IPR002059:IPR012340:IPR019844:IPR 011129:IPR016027; KEGG: hya:HY04AAS1_0926 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B4U902 Cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain
YP_005511194.1	InterPro IPR003369:IPR006312; KEGG: aae:aq_064b hypothetical protein; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: O66477 Sec-independent protein translocase tatA/E-like protein 2; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_005511195.1	InterPro IPR003369:IPR006312; KEGG: hya:HY04AAS1_0191 twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: A8UW15 Putative uncharacterized protein; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_005511196.1	KEGG: hya:HY04AAS1_1118 twin-arginine translocation protein TatB; SPTR: B4U9J3 Twin-arginine translocation protein TatB; PFAM: mttA/Hcf106 family
YP_005511197.1	COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR002033:IPR019822; KEGG: aae:aq_1267 hypothetical protein; PFAM: Sec-independent periplasmic protein translocase; SPTR: O67305 Uncharacterized protein aq_1267; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC
YP_005511198.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: aae:aq_135 NADH dehydrogenase (ubiquinone); PFAM: NAD-dependent epimerase/dehydratase; SPTR: O66532 NADH dehydrogenase (Ubiquinone); PFAM: NAD dependent epimerase/dehydratase family
YP_005511199.1	COGs: COG1318 transcriptional regulator protein; KEGG: aae:aq_2056 hypothetical protein; SPTR: A8USK1 Putative uncharacterized protein
YP_005511200.1	COGs: COG2911 conserved hypothetical protein; InterPro IPR007452; KEGG: aae:aq_2054 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: A8USK0 Putative uncharacterized protein; PFAM: Family of unknown function (DUF490); TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_005511201.1	COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570:IPR000462; KEGG: aae:aq_2154 phosphotidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: O67908 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_005511202.1	COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR003010:IPR004563; KEGG: aae:aq_819 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: A8UVN4 Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_005511203.1	COGs: COG2510 membrane protein; InterPro IPR000620; KEGG: aae:aq_1741 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8UTG7 Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_005511204.1	COGs: COG0708 Exonuclease III; InterPro IPR004808:IPR005135:IPR000097; KEGG: saf:SULAZ_0920 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: A8UTG8 Exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_005511205.1	COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119:IPR020816:IPR010992; KEGG: sul:SYO3AOP1_0867 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: A8UR82 Putative uncharacterized protein; PFAM: Bacterial DNA-binding protein
YP_005511206.1	SPTR: C6JFE3 Putative uncharacterized protein
YP_005511207.1	KEGG: gyc:GYMC61_3083 hypothetical protein; SPTR: C9RUM7 Putative uncharacterized protein
YP_005511208.1	InterPro IPR018330; KEGG: chy:CHY_1689 prophage LambdaCh01, recombination protein Bet; PFAM: DNA single-strand annealing protein RecT-like; SPTR: Q3ABH5 Prophage LambdaCh01, recombination protein Bet; PFAM: RecT family; TIGRFAM: phage recombination protein Bet
YP_005511209.1	KEGG: hypothetical protein ; K12869 crooked neck; SPTR: B3SCA0 Putative uncharacterized protein
YP_005511210.1	KEGG: hypothetical protein; SPTR: A4HHL9 Putative uncharacterized protein
YP_005511211.1	KEGG: lbf:LBF_0009 DNA gyrase subunit A; SPTR: B0SK36 DNA gyrase subunit A
YP_005511212.1	InterPro IPR000789; KEGG: hypothetical protein; K12603 CCR4-NOT transcription complex subunit 6; SPTR: Q7RFI3 Arabidopsis thaliana At3g58560/F14P22_150-related
YP_005511213.1	KEGG: GK19955 gene product from transcript GK19955-RA; SPTR: B4MSD9 GK19955
YP_005511214.1	InterPro IPR018247; KEGG: ppd:Ppro_0168 hypothetical protein; SPTR: A1AKD4 Putative uncharacterized protein
YP_005511216.1	COGs: COG2932 transcriptional regulator protein; InterPro IPR011056:IPR001387:IPR019759:IPR015927:IPR 010982; KEGG: hya:HY04AAS1_0817 putative phage repressor; PFAM: helix-turn-helix domain protein; Peptidase S24/S26A/S26B, conserved region; SMART: helix-turn-helix domain protein; SPTR: B4U8P3 Putative phage repressor; PFAM: Helix-turn-helix; Peptidase S24-like
YP_005511217.1	KEGG: pph:Ppha_2388 transcriptional regulator, XRE family; SPTR: A4N1A6 Putative uncharacterized protein; PFAM: Helix-turn-helix
YP_005511218.1	KEGG: mka:MK0690 SMC1-family ATPase; SPTR: Q4XEI8 Putative uncharacterized protein
YP_005511219.1	InterPro IPR002694:IPR000463; KEGG: aoe:Clos_1278 DNA primase; SPTR: A8V3J3 Putative uncharacterized protein (Fragment)
YP_005511220.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR000212; KEGG: nph:NP0930A helicase; PFAM: UvrD/REP helicase; SPTR: Q3ITH7 Probable helicase; PFAM: UvrD/REP helicase
YP_005511221.1	InterPro IPR012337; KEGG: fno:Fnod_1720 crossover junction endodeoxyribonuclease RuvC; SPTR: A8V1X8 Putative uncharacterized protein; PFAM: Crossover junction endodeoxyribonuclease RuvC
YP_005511222.1	KEGG: aae:aq_1945 RNA polymerase beta prime subunit; SPTR: O67763 DNA-directed RNA polymerase subunit beta'
YP_005511223.1	COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR014729:IPR002500; KEGG: bvu:BVU_2844 putative sulfate adenylate transferase, subunit 2; PFAM: phosphoadenosine phosphosulfate reductase; SPTR: A5ZE69 Putative uncharacterized protein; PFAM: Phosphoadenosine phosphosulfate reductase family
YP_005511224.1	KEGG: aae:aq_1144 p-aminobenzoate synthetase; SPTR: A6CLQ5 YfjO
YP_005511225.1	InterPro IPR004843; KEGG: ttu:TERTU_3463 Ser/Thr protein phosphatase family protein; PFAM: metallophosphoesterase; SPTR: C9DC36 Gp52; PFAM: Calcineurin-like phosphoesterase
YP_005511226.1	KEGG: apt:APA01_05700 glycerate dehydrogenase; SPTR: C1QBD3 Putative uncharacterized protein
YP_005511227.1	KEGG: hypothetical protein; SPTR: A8BA49 Putative uncharacterized protein
YP_005511228.1	KEGG: cno:NT01CX_2406 hypothetical protein; SPTR: C6RFK9 PolyA polymerase family protein
YP_005511229.1	KEGG: cpy:Cphy_0546 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: A9KI99 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_005511230.1	KEGG: DUF1776 family protein; SPTR: Q9URV8 UPF0744 protein C106.03
YP_005511231.1	KEGG: similar to Peptidylglycine alpha-amidating monooxygenase COOH-terminal interactor; SPTR: A8UTR2 Putative uncharacterized protein
YP_005511232.1	InterPro IPR002559; KEGG: aae:aq_aa40 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: O70075 Uncharacterized protein aq_1391/aq_1640/aq_aa40; PFAM: Transposase DDE domain
YP_005511233.1	KEGG: tgr:Tgr7_2026 chromosome segregation SMC protein; SPTR: B5JWI7 Chromosome segregation protein SMC
YP_005511234.1	InterPro IPR002052:IPR006517; KEGG: cjr:CJE0249 phage uncharacterized protein; SPTR: C3XLY5 Putative uncharacterized protein; TIGRFAM: phage uncharacterized protein; PFAM: Terminase-like family; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain
YP_005511235.1	KEGG: dac:Daci_1943 hypothetical protein; SPTR: A9BYP0 Putative uncharacterized protein
YP_005511236.1	InterPro IPR008979; KEGG: bcg:BCG9842_A0121 hypothetical protein; SPTR: B7IZJ4 Putative uncharacterized protein
YP_005511237.1	KEGG: cac:CAC1872 replication initiation protein REP; SPTR: Q97HY4 Replication initiation protein REP
YP_005511238.1	KEGG: retinitis pigmentosa GTPase regulator-like protein; SPTR: A8UYW5 Putative uncharacterized protein
YP_005511239.1	KEGG: dac:Daci_1946 putative phage major head protein; SPTR: A8UYW7 Putative uncharacterized protein
YP_005511240.1	KEGG: cyt:cce_4003 asparagine synthetase B; SPTR: A8UYW9 Putative uncharacterized protein
YP_005511241.1	KEGG: smt:Smal_0995 GCN5-related N-acetyltransferase; SPTR: A8UYX1 Putative uncharacterized protein
YP_005511242.1	KEGG: hypothetical protein; SPTR: A8UYX3 Putative uncharacterized protein
YP_005511243.1	KEGG: gur:Gura_1816 Ig family protein; SPTR: A8UYX6 Putative uncharacterized protein
YP_005511244.1	KEGG: hypothetical protein; SPTR: A8UYX9 Putative uncharacterized protein
YP_005511245.1	KEGG: tel:tlr1645 hypothetical protein; SPTR: Q8DIE5 Tlr1645 protein
YP_005511246.1	KEGG: mrd:Mrad2831_0144 cold-shock DNA-binding domain-containing protein; SPTR: A8UYY2 Putative uncharacterized protein
YP_005511247.1	KEGG: kpe:KPK_0775 flavodoxin FldB; SPTR: C6K2G9 GpH
YP_005511248.1	KEGG: GK22572 gene product from transcript GK22572-RA; SPTR: B4R3V7 GD16626
YP_005511249.1	KEGG: sml:Smlt1976 hypothetical protein; SPTR: A8UZ10 Putative uncharacterized protein
YP_005511250.1	SPTR: C4WE04 Putative uncharacterized protein
YP_005511251.1	KEGG: similar to CG31550-PB, isoform B; K13096 splicing factor 4; SPTR: A5KRP6 Putative uncharacterized protein
YP_005511252.1	KEGG: Zfp169, Zfp169_predicted; zinc finger protein 169; K09228 KRAB domain-containing zinc finger protein; SPTR: C3YHL9 Putative uncharacterized protein (Fragment)
YP_005511253.1	COGs: COG3926 Putative secretion activating protein; InterPro IPR008565:IPR018537; KEGG: hba:Hbal_2383 protein of unknown function DUF847; PFAM: protein of unknown function DUF847; Peptidoglycan binding domain; SPTR: C1TPL6 Putative secretion activating protein; PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847)
YP_005511256.1	KEGG: hypothetical protein; SPTR: A7XXU2 Putative uncharacterized protein
YP_005511257.1	KEGG: spi:MGAS10750_Spy1810 M protein; SPTR: Q9ZIX5 Mrp22
YP_005511259.1	COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR015421:IPR020580:IPR015424; KEGG: aae:aq_1903 glycine dehydrogenase subunit 2; PFAM: Glycine cleavage system P-protein-like; SPTR: A8UWQ1 Glycine dehydrogenase subunit 2; PFAM: Glycine cleavage system P-protein
YP_005511260.1	COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: aae:aq_1882 DNA polymerase III beta chain; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: A8UQZ0 DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_005511261.1	COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR000644:IPR001667:IPR003156:IPR002646:IPR 017985; KEGG: aae:aq_411 poly A polymerase; PFAM: Polynucleotide adenylyltransferase region; CBS domain containing protein; phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: CBS domain containing protein; SPTR: A8UST1 Poly A polymerase; PFAM: DHH family; CBS domain; Poly A polymerase head domain
YP_005511262.1	COGs: COG0701 permease; InterPro IPR005524; KEGG: mka:MK1407 permease; PFAM: permease; SPTR: A8UQJ9 Pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Predicted permease
YP_005511263.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: aae:aq_1847 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: A8USR5 Putative uncharacterized protein; PFAM: Roadblock/LC7 domain
YP_005511264.1	KEGG: aae:aq_1845 hypothetical protein; SPTR: A8USR6 Putative uncharacterized protein
YP_005511265.1	COGs: COG2229 GTPase; InterPro IPR001806:IPR004130:IPR005225; KEGG: aae:aq_1844 hypothetical protein; PFAM: protein of unknown function ATP binding; SPTR: A8USR8 Putative uncharacterized protein; TIGRFAM: small GTP-binding protein; PFAM: Conserved hypothetical ATP binding protein; TIGRFAM: small GTP-binding protein domain
YP_005511266.1	COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; InterPro IPR000534:IPR012280:IPR000706:IPR016040; KEGG: aae:aq_1879 N-acetyl-gamma-glutamylphosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: A8UQT2 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_005511267.1	COGs: COG0103 Ribosomal protein S9; InterPro IPR014721:IPR000754:IPR020574:IPR020568; KEGG: aae:aq_1878 ribosomal protein S09; PFAM: ribosomal protein S9; SPTR: A8UQT1 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16
YP_005511268.1	COGs: COG0102 Ribosomal protein L13; InterPro IPR005822:IPR005823; KEGG: aae:aq_1877 50S ribosomal protein L13; PFAM: ribosomal protein L13; SPTR: O67722 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_005511269.1	COGs: COG1881 Phospholipid-binding protein; InterPro IPR008914:IPR005247; KEGG: aae:aq_1250 hypothetical protein; PFAM: PEBP family protein; SPTR: A8UUH2 Putative uncharacterized protein; PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: conserved hypothetical protein TIGR00481
YP_005511270.1	COGs: COG0320 Lipoate synthase; InterPro IPR013785:IPR007197:IPR003698:IPR006638; KEGG: ate:Athe_0701 lipoic acid synthetase; PFAM: Radical SAM domain protein; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: B9MQ24 Lipoyl synthase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase
YP_005511271.1	COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR012165:IPR017927:IPR008333:IPR001433:IPR 019480:IPR017938; KEGG: pmx:PERMA_0693 putative [NiFe] hydrogenasegamma subunit; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: C0QP85 Putative [NiFe] hydrogenasegamma subunit; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_005511272.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: aae:aq_986 hypothetical protein; PFAM: secretion protein HlyD family protein; SPTR: O67111 Putative uncharacterized protein; PFAM: HlyD family secretion protein
YP_005511273.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: aae:aq_1670 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: A8UU84 Putative uncharacterized protein; PFAM: Outer membrane efflux protein
YP_005511274.1	COGs: COG2143 Thioredoxin-related protein; InterPro IPR012335:IPR017936:IPR012336; KEGG: aae:aq_1669 hypothetical protein; SPTR: A8UU85 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255
YP_005511275.1	COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: aae:aq_1327 hypothetical protein; PFAM: Rhomboid family protein; SPTR: A8UVF7 Putative uncharacterized protein; PFAM: Rhomboid family
YP_005511276.1	COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: aae:aq_852 pyridoxal phosphate biosynthetic protein PdxA; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: A8UYF6 Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase
YP_005511277.1	InterPro IPR011990:IPR019734:IPR013026:IPR001440:IPR 013105:IPR006597; KEGG: saf:SULAZ_1707 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: C4FL63 Tetratricopeptide repeat domain protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2225); Tetratricopeptide repeat
YP_005511278.1	COGs: COG1550 conserved hypothetical protein; InterPro IPR007546; KEGG: hya:HY04AAS1_0361 protein of unknown function DUF503; PFAM: protein of unknown function DUF503; SPTR: A8UTD7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF503)
YP_005511279.1	COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: aae:aq_1691 hypothetical protein; PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; SPTR: A8UU72 Putative uncharacterized protein; PFAM: Mov34/MPN/PAD-1 family
YP_005511280.1	COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR012080:IPR000534:IPR012280:IPR005986:IPR 016040; KEGG: aae:aq_1866 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: A8UQL4 Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
YP_005511281.1	COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: pmx:PERMA_0445 hypothetical protein; SPTR: C0QU70 Putative membrane protein
YP_005511282.1	COGs: COG2930 conserved hypothetical protein; InterPro IPR007461; KEGG: gem:GM21_2073 protein of unknown function DUF500; PFAM: protein of unknown function DUF500; SPTR: C6E930 Putative uncharacterized protein; PFAM: Family of unknown function (DUF500)
YP_005511283.1	InterPro IPR017896:IPR017900:IPR009051; KEGG: pmx:PERMA_0694 putative [NiFe] hydrogenase, beta subunit; SPTR: C0QP86 Putative [NiFe] hydrogenase, beta subunit
YP_005511284.1	COGs: COG1186 Protein chain release factor B; InterPro IPR005139:IPR000352:IPR004374; KEGG: aae:aq_1840 peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: O67695 Peptide chain release factor 2; TIGRFAM: peptide chain release factor 2; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2
YP_005511285.1	COGs: COG0536 GTPase; InterPro IPR014100:IPR006073:IPR006169:IPR002917:IPR 005225; KEGG: aae:aq_2069 GTPase ObgE; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; SPTR: A8UU76 GTP-binding protein; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; small GTP-binding protein domain
YP_005511286.1	COGs: COG1225 Peroxiredoxin; InterPro IPR012335:IPR017936:IPR000866:IPR017937:IPR 012336; KEGG: sus:Acid_3880 redoxin domain-containing protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A8USJ6 Peroxiredoxin-like protein; PFAM: AhpC/TSA family
YP_005511287.1	COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: aae:aq_274 hypothetical protein; PFAM: alanine racemase domain protein; SPTR: O66631 UPF0001 protein aq_274; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_005511288.1	COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020060:IPR014729:IPR020061:IPR020752:IPR 020751:IPR020058:IPR001412:IPR004527:IPR008925; KEGG: aae:aq_1221 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: O67271 Glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_005511289.1	COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR004276:IPR007235:IPR006009; KEGG: aae:aq_1177 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28; SPTR: O67238 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_005511290.1	COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005835:IPR005771; KEGG: hya:HY04AAS1_0611 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; SPTR: B4U837 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase
YP_005511291.1	COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: aae:aq_050 hypothetical protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; SPTR: A8URZ1 Putative uncharacterized protein; PFAM: Surface antigen variable number repeat; Surface antigen
YP_005511292.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR001176:IPR015421:IPR004839:IPR015424; KEGG: aae:aq_421 aminotransferase; PFAM: aminotransferase class I and II; SPTR: O66737 Aminotransferase (AspC family); PFAM: Aminotransferase class I and II
YP_005511293.1	COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664:IPR006665; KEGG: aae:aq_2147 peptidoglycan associated lipoprotein; PFAM: OmpA/MotB domain protein; SPTR: O67903 Peptidoglycan associated lipoprotein; PFAM: OmpA family
YP_005511294.1	COGs: COG0073 EMAP domain; InterPro IPR012340:IPR002547:IPR004495:IPR016027; KEGG: aae:aq_422 methionyl-tRNA synthetase beta subunit; PFAM: t-RNA-binding domain protein; SPTR: A8UWP7 Methionyl-tRNA synthetase beta subunit; TIGRFAM: methionyl-tRNA synthetase, beta subunit; PFAM: Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain
YP_005511295.1	KEGG: hya:HY04AAS1_1581 hypothetical protein; SPTR: A8UU71 Putative uncharacterized protein
YP_005511296.1	COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: aae:aq_1220 hypothetical protein; PFAM: glycosyl transferase family 39; SPTR: O67270 Uncharacterized protein aq_1220; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_005511297.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR001453:IPR005110:IPR005111:IPR020817; KEGG: aae:aq_030 molybdenum cofactor biosynthesis protein A; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: O66448 Molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_005511298.1	COGs: COG1812 S-adenosylmethionine synthetase; InterPro IPR002795; KEGG: aae:aq_1226 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase (MAT); PRIAM: Methionine adenosyltransferase; SPTR: A8UR31 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase (AdoMet synthetase)
YP_005511299.1	COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); InterPro IPR006223:IPR006222:IPR013977; KEGG: aae:aq_1458 aminomethyltransferase (glycine cleavage system T protein); PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; SPTR: O67441 Aminomethyltransferase; TIGRFAM: glycine cleavage system T protein; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein
YP_005511300.1	COGs: COG0795 permease; InterPro IPR005495; KEGG: aae:aq_359 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: O66685 Uncharacterized protein aq_359; PFAM: Predicted permease YjgP/YjgQ family
YP_005511301.1	COGs: COG0149 Triosephosphate isomerase; InterPro IPR013785:IPR000652:IPR020861; KEGG: aae:aq_360 triosephosphate isomerase; PFAM: triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: O66686 Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_005511302.1	KEGG: hya:HY04AAS1_0960 hypothetical protein; SPTR: B4U936 Putative uncharacterized protein
YP_005511303.1	COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR006371; KEGG: aae:aq_052 4-hydroxybenzoate octaprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: O66464 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase
YP_005511304.1	COGs: COG0305 Replicative DNA helicase; InterPro IPR016136:IPR007694:IPR018062:IPR007692:IPR 007693:IPR003593; KEGG: aae:aq_1472 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; SPTR: A8UVS9 Replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_005511305.1	KEGG: hya:HY04AAS1_1321 hypothetical protein; SPTR: B4UA45 Putative uncharacterized protein
YP_005511306.1	COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR004620:IPR003171; KEGG: aae:aq_1429 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: A8UU31 Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form
YP_005511307.1	KEGG: mma:MM_2091 putative transport channel protein; SPTR: A8UU35 Putative uncharacterized protein
YP_005511308.1	COGs: COG4274 conserved hypothetical protein; InterPro IPR014845; KEGG: tye:THEYE_A1821 hypothetical protein; PFAM: GYD family protein; SPTR: A8UW97 Putative uncharacterized protein; PFAM: GYD domain
YP_005511309.1	InterPro IPR009056:IPR003088; KEGG: tgr:Tgr7_0683 cytochrome c class I; PFAM: cytochrome c class I; SPTR: C7HXX4 Cytochrome c family protein
YP_005511310.1	KEGG: tgr:Tgr7_0684 hypothetical protein; SPTR: B8GME4 Putative uncharacterized protein
YP_005511311.1	COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR014729:IPR001763:IPR000541:IPR011063; KEGG: sai:Saci_0378 PP-loop family protein; PFAM: Rhodanese domain protein; PP-loop domain protein; SMART: Rhodanese domain protein; SPTR: Q4JBN5 PP-loop family protein; PFAM: PP-loop family; Rhodanese-like domain; TIGRFAM: conserved hypothetical protein TIGR00269
YP_005511312.1	COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR000189:IPR008258; KEGG: saf:SULAZ_1370 peptidoglycan-binding LysM:lytic transglycosylase, catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: A8UVN9 Putative uncharacterized protein; PFAM: Transglycosylase SLT domain
YP_005511313.1	COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR002052:IPR004556:IPR019874:IPR007848; KEGG: aae:aq_099 protoporphyrinogen oxidase; PFAM: methyltransferase small; SPTR: A8UY00 Protoporphyrinogen oxidase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_005511314.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR001412:IPR000276:IPR002550:IPR 005170; KEGG: aae:aq_101 hemolysin; PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SPTR: O66507 Hemolysin; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_005511315.1	COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: aae:aq_1610 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: O67541 UPF0758 protein aq_1610; TIGRFAM: DNA repair protein RadC; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc
YP_005511316.1	COGs: COG3957 Phosphoketolase; InterPro IPR019790:IPR019789:IPR018970:IPR005593; KEGG: dtu:Dtur_0362 putative phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; PRIAM: Phosphoketolase; SPTR: B8DZ47 Phosphoketolase; manually curated; PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain
YP_005511317.1	COGs: COG0282 Acetate kinase; InterPro IPR000890:IPR004372; KEGG: sun:SUN_1996 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: A6QBT0 Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_005511318.1	COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; InterPro IPR016040:IPR020630:IPR020631:IPR000672; KEGG: aae:aq_1898 methylenetetrahydrofolate dehydrogenase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: O67736 Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_005511319.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: aae:aq_1270 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: A8UUI0 Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_005511320.1	COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR010084:IPR013114; KEGG: aae:aq_056 (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: O66468 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
YP_005511321.1	COGs: COG4654 Cytochrome c551/c552; InterPro IPR009056:IPR003088:IPR002324; KEGG: hya:HY04AAS1_1163 cytochrome c class I; PFAM: cytochrome c class I; SPTR: P15452 Cytochrome c-552; PFAM: Cytochrome c
YP_005511322.1	KEGG: aeh:Mlg_0313 hypothetical protein; SPTR: A8UW17 Putative uncharacterized protein
YP_005511323.1	COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003348; KEGG: iho:Igni_1326 arsenite-transporting ATPase; PFAM: Anion-transporting ATPase; SPTR: A8USX1 Anion transporting ATPase; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA)
YP_005511324.1	COGs: COG0531 Amino acid transporter; InterPro IPR004841:IPR002293; KEGG: saf:SULAZ_1269 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: C1DVV1 Amino acid permease-associated region; PFAM: Amino acid permease
YP_005511325.1	COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021:IPR002071:IPR016071; KEGG: saf:SULAZ_0225 thermonuclease (TNase) (micrococcal nuclease)(staphylococcal nuclease); PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); SPTR: A8UTC7 Micrococcal nuclease-like protein; PFAM: Staphylococcal nuclease homologue
YP_005511326.1	COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR000399:IPR018506:IPR012846:IPR012001:IPR 012000:IPR011766; KEGG: aae:aq_451 acetolactate synthase large subunit; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A8USR2 Acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_005511327.1	COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789:IPR002912:IPR019455; KEGG: aae:aq_1851 acetolactate synthase; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: O67703 Acetolactate synthase small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit
YP_005511328.1	COGs: COG0260 Leucyl aminopeptidase; InterPro IPR000819:IPR008283; KEGG: aae:aq_2099 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; PRIAM: Leucyl aminopeptidase; SPTR: O67868 Probable cytosol aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_005511329.1	COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR013785:IPR004393:IPR002638; KEGG: aae:aq_869 quinolinate phosphoribosyl transferase; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: O67029 Quinolinate phosphoribosyl transferase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase
YP_005511330.1	InterPro IPR002636; KEGG: sul:SYO3AOP1_1741 protein of unknown function DUF29; PFAM: protein of unknown function DUF29; SPTR: Q9AJL7 Putative uncharacterized protein; PFAM: Domain of unknown function DUF29
YP_005511331.1	COGs: COG0297 Glycogen synthase; InterPro IPR011835:IPR013534:IPR001296; KEGG: hya:HY04AAS1_0004 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; PRIAM: Starch synthase; SPTR: B4U626 Glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type
YP_005511332.1	COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR014729:IPR011914:IPR004821:IPR004820; KEGG: aae:aq_185 glycerol-3-phosphate cytidyltransferase; PFAM: cytidylyltransferase; SPTR: O66572 Glycerol-3-phosphate cytidyltransferase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain
YP_005511333.1	InterPro IPR002934; KEGG: geo:Geob_3290 DNA polymerase beta domain protein region; PFAM: DNA polymerase beta domain protein region; SPTR: B9M4U9 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain
YP_005511334.1	InterPro IPR010235; KEGG: maq:Maqu_2654 HI0074 family nucleotidyltransferase substrate binding protein; PFAM: Nucleotidyltransferase substrate binding protein HI0074; SPTR: A1U410 Nucleotidyltransferase substrate binding protein, HI0074 family; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein like; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family
YP_005511335.1	KEGG: aae:aq_2203 hypothetical protein; SPTR: A8UY84 Putative uncharacterized protein; PFAM: Recombination protein O N terminal
YP_005511336.1	COGs: COG0414 Panthothenate synthetase; InterPro IPR014729:IPR003721; KEGG: aae:aq_2132 pantothenate synthetase; PFAM: Pantoate-beta-alanine ligase; SPTR: A8UY85 Pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase
YP_005511337.1	COGs: COG0054 Riboflavin synthase beta-chain; InterPro IPR002180; KEGG: aae:aq_132 riboflavin synthase beta subunit; PFAM: 67-dimethyl-8-ribityllumazine synthase; SPTR: A8URH0 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_005511338.1	COGs: COG0781 Transcription termination factor; InterPro IPR006027:IPR011605; KEGG: aae:aq_133 transcription antitermination protein NusB; PFAM: NusB/RsmB/TIM44; SPTR: A8URG9 Transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_005511339.1	COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR013785:IPR006063:IPR006062:IPR011060; KEGG: aae:aq_1303 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; SPTR: O67328 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_005511340.1	KEGG: poy:PAM150 translation initiation factor IF-2; SPTR: C8MFC7 DNA-3-methyladenine glycosidase
YP_005511341.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR000792:IPR014284:IPR007627:IPR013249:IPR 013325:IPR013324; KEGG: rpd:RPD_1915 RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Q139T9 Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005511342.1	InterPro IPR001120:IPR012902; KEGG: swp:swp_4636 type IV pilin, putative; SPTR: A4A090 Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005511343.1	COGs: COG2604 conserved hypothetical protein; InterPro IPR002826; KEGG: pmx:PERMA_1621 hypothetical protein; PFAM: protein of unknown function DUF115; SPTR: A8UWS4 Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function DUF115
YP_005511344.1	COGs: COG2604 conserved hypothetical protein; InterPro IPR002826; KEGG: pmx:PERMA_1621 hypothetical protein; PFAM: protein of unknown function DUF115; SPTR: A8UWS4 Putative uncharacterized protein; PFAM: Protein of unknown function DUF115
YP_005511345.1	KEGG: nmr:Nmar_0456 hypothetical protein; SPTR: A9A166 Putative uncharacterized protein
YP_005511346.1	KEGG: maa:MAG_4160 alanyl-tRNA synthetase; SPTR: B1CAS2 Putative uncharacterized protein
YP_005511347.1	InterPro IPR001120:IPR012902; KEGG: mlo:mlr6823 general secretion protein I; SPTR: B7A7Q0 Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005511348.1	KEGG: xfm:Xfasm12_0862 general secretory pathway protein K; SPTR: B0U6Y3 General secretory pathway protein K; PFAM: General secretion pathway protein K
YP_005511349.1	InterPro IPR001120:IPR012902; KEGG: hya:HY04AAS1_0904 hypothetical protein; SPTR: C9A2L5 Predicted protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005511350.1	COGs: COG1242 Fe-S oxidoreductase; InterPro IPR013785:IPR005911:IPR007197:IPR006638; KEGG: aae:aq_632 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: O66879 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family
YP_005511351.1	COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: aae:aq_2073 hypothetical protein; PFAM: cation efflux protein; SPTR: A8UST4 Putative uncharacterized protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_005511352.1	COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR002195:IPR004722:IPR006680:IPR011059; KEGG: aae:aq_806 dihydroorotase; PFAM: amidohydrolase; SPTR: O66990 Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type
YP_005511353.1	COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099:IPR016040; KEGG: aae:aq_1755 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; PRIAM: Prephenate dehydrogenase; SPTR: A8UT17 Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase
YP_005511354.1	SPTR: A8US01 Putative uncharacterized protein
YP_005511355.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: aae:aq_481 transporter; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A8UXR9 Transporter (OppBC family) protein; PFAM: Binding-protein-dependent transport system inner membrane component
YP_005511356.1	InterPro IPR010652; KEGG: eat:EAT1b_2287 protein of unknown function DUF1232; PFAM: protein of unknown function DUF1232; SPTR: A8UXS1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1232)
YP_005511357.1	COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017472:IPR017475:IPR003362; KEGG: pmx:PERMA_2008 putative undecaprenyl-phosphate galactosephosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: C0QSW5 Putative undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
YP_005511358.1	COGs: COG0853 Aspartate 1-decarboxylase; InterPro IPR009010:IPR003190; KEGG: aae:aq_476 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: A8USQ8 Aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_005511359.1	KEGG: aae:aq_460 hypothetical protein; SPTR: O66765 Uncharacterized protein aq_460
YP_005511360.1	COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: aae:aq_1496 NagC/XylR family transcriptional regulator; PFAM: ROK family protein; SPTR: O67468 Transcriptional regulator (NagC/XylR family); PFAM: ROK family
YP_005511361.1	KEGG: GTPase activating protein (Tsc2), putative; SPTR: A8UTE9 Putative uncharacterized protein
YP_005511362.1	COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR018062:IPR002523; KEGG: aae:aq_851 Mg(2+) and Co(2+) transport protein; PFAM: Mg2 transporter protein CorA family protein; SPTR: A8UTF0 Mg(2+) and Co(2+) transport protein; PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA)
YP_005511363.1	COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: aae:aq_1695a hypothetical protein; PFAM: glycosyl transferase family 39; SPTR: O67601 Uncharacterized protein aq_1704; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_005511364.1	COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR010916:IPR003697; KEGG: aae:aq_1718 MAF protein; PFAM: Maf family protein; SPTR: O67613 Maf-like protein aq_1718; TIGRFAM: maf protein; manually curated; PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_005511365.1	COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR005791:IPR003335; KEGG: aae:aq_973 protein export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: A8URN1 Protein export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family
YP_005511366.1	COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: aae:aq_326 3-deoxy-D-manno-2-octulosonic acid transferase; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; SPTR: O66663 3-deoxy-D-manno-2-octulosonic acid transferase; manually curated; PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
YP_005511367.1	COGs: COG0474 Cation transport ATPase; InterPro IPR018303:IPR006415:IPR001757:IPR004014:IPR 008250:IPR005834:IPR006068; KEGG: tte:TTE2509 cation transport ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; PRIAM: Magnesium-importing ATPase; SPTR: B7R9U8 Magnesium-translocating P-type ATPase; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase
YP_005511368.1	InterPro IPR010980; KEGG: cph:Cpha266_2129 hypothetical protein; SPTR: A1BIA9 Putative uncharacterized protein
YP_005511369.1	COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: mka:MK0287 metal-sulfur cluster biosynthetic protein; PFAM: protein of unknown function DUF59; SPTR: C8SBQ3 Putative uncharacterized protein; PFAM: Domain of unknown function DUF59
YP_005511370.1	InterPro IPR001455:IPR015077; KEGG: pfu:PF0693 hypothetical protein; PFAM: Domain of unknown function DUF1858; SPTR: Q8U2Y5 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1858); SirA-like protein
YP_005511371.1	KEGG: hya:HY04AAS1_1272 hypothetical protein; SPTR: B4U9Z6 Putative uncharacterized protein
YP_005511372.1	COGs: COG1586 S-adenosylmethionine decarboxylase; InterPro IPR016067:IPR017716:IPR003826; KEGG: aae:aq_254 S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; SPTR: A8UVX5 S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Bacillus form
YP_005511373.1	COGs: COG0742 N6-adenine-specific methylase; InterPro IPR002052:IPR016065:IPR004398; KEGG: pmx:PERMA_1756 hypothetical protein; PFAM: Protein of unknown function methylase putative; SPTR: A8UVX6 Putative uncharacterized protein; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_005511374.1	COGs: COG0669 Phosphopantetheine adenylyltransferase; InterPro IPR014729:IPR004821:IPR001980:IPR004820; KEGG: aae:aq_253 lipopolysaccharide core biosynthesis protein; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: A8UVX7 Lipopolysaccharide core biosynthesis protein; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_005511375.1	KEGG: sfu:Sfum_2019 hypothetical protein; SPTR: A0LJV0 Putative uncharacterized protein
YP_005511376.1	InterPro IPR003594; KEGG: pmx:PERMA_1156 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; SPTR: C0QQJ2 Putative uncharacterized protein
YP_005511377.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011991:IPR001789:IPR001867:IPR011006; KEGG: sul:SYO3AOP1_0871 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B2V976 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005511378.1	COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: aae:aq_1814 hypothetical protein; PFAM: zinc/iron permease; SPTR: O67678 Putative uncharacterized protein; PFAM: ZIP Zinc transporter
YP_005511379.1	COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR004467:IPR000836; KEGG: aae:aq_1907 uridine 5-monophosphate synthase; PFAM: phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: A8UT55 Uridine 5-monophosphate synthase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase
YP_005511380.1	COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR015928:IPR011824:IPR011827:IPR000573; KEGG: aae:aq_1398 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein; SPTR: A8UYD4 3-isopropylmalate dehydratase; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_005511381.1	COGs: COG0233 Ribosome recycling factor; InterPro IPR002661; KEGG: aae:aq_712 ribosome recycling factor; PFAM: ribosome recycling factor; SPTR: O66928 Ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_005511382.1	COGs: COG0528 Uridylate kinase; InterPro IPR001048:IPR015963:IPR011817; KEGG: aae:aq_713 UMP kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: A8UY71 UMP kinase; TIGRFAM: uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_005511383.1	COGs: COG0264 Translation elongation factor Ts; InterPro IPR014039:IPR018101:IPR001816:IPR000449:IPR 009060; KEGG: aae:aq_715 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; SPTR: A8UY70 Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_005511384.1	COGs: COG0052 Ribosomal protein S2; InterPro IPR018130:IPR005706:IPR001865; KEGG: aae:aq_2007 30S ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: O67809 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_005511385.1	COGs: COG1281 Disulfide bond chaperones of the HSP33 family; InterPro IPR016153:IPR016154:IPR000397; KEGG: aae:aq_2009 hypothetical protein; PFAM: Hsp33 protein; SPTR: A8USE1 S-adenosylmethionine synthetase; PFAM: Hsp33 protein
YP_005511386.1	COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: aae:aq_153 heme O oxygenase; PFAM: cytochrome oxidase assembly; SPTR: A8UU94 Heme O oxygenase; PFAM: Cytochrome oxidase assembly protein
YP_005511387.1	COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); InterPro IPR000537:IPR006369; KEGG: aae:aq_154 cytochrome c oxidase assembly factor; PFAM: UbiA prenyltransferase; SPTR: A8UU95 Cytochrome c oxidase assembly factor; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase
YP_005511388.1	InterPro IPR000883; KEGG: aae:aq_155 hypothetical protein; PFAM: cytochrome c oxidase subunit I; SPTR: A8UU96 Putative uncharacterized protein; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_005511390.1	COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR016192:IPR002125:IPR016193; KEGG: aae:aq_903 hypothetical protein; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: O67050 tRNA-specific adenosine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005511391.1	KEGG: saz:Sama_0198 pantothenate kinase; SPTR: Q0G522 Putative uncharacterized protein
YP_005511392.1	COGs: COG0320 Lipoate synthase; InterPro IPR013785:IPR003698:IPR007197:IPR006638; KEGG: aae:aq_1355 lipoyl synthase; PFAM: Radical SAM domain protein; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: O67368 Lipoyl synthase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase
YP_005511393.1	COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR014710:IPR006375:IPR005835:IPR001538:IPR 011051; KEGG: dtu:Dtur_0056 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: B8DYL2 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_005511394.1	COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: aae:aq_853 hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: O67020 Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase
YP_005511395.1	KEGG: hya:HY04AAS1_0105 hypothetical protein; SPTR: B4U6M9 Putative uncharacterized protein
YP_005511396.1	COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: aae:aq_1427 lipid A disaccharide synthetase; PFAM: glycosyl transferase family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: A8UTA1 Lipid A disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase
YP_005511397.1	COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942:IPR006224:IPR006225:IPR006145:IPR 020103; KEGG: aae:aq_1758 hypothetical protein; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: O67638 Uncharacterized RNA pseudouridine synthase aq_1758; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_005511398.1	KEGG: hya:HY04AAS1_1521 hypothetical protein; SPTR: A8UV05 Putative uncharacterized protein
YP_005511399.1	COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395:IPR009053; KEGG: aae:aq_1006 hypothetical protein; PFAM: SMC domain protein; SPTR: O67124 Probable DNA double-strand break repair rad50 ATPase; TIGRFAM: exonuclease SbcC
YP_005511400.1	COGs: COG0420 DNA repair exonuclease; InterPro IPR004593:IPR004843; KEGG: aae:aq_1886 ATP-dependent dsDNA exonuclease; PFAM: metallophosphoesterase; SPTR: A8UQZ4 ATP-dependent dsDNA exonuclease; TIGRFAM: nuclease SbcCD, D subunit; PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD
YP_005511401.1	COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: aae:aq_1884 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8UQZ3 Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2
YP_005511402.1	KEGG: ASH1L; ash1 (absent, small, or homeotic)-like (Drosophila); K06101 histone-lysine N-methyltransferase ASH1L; SPTR: A8UQZ2 Putative uncharacterized protein
YP_005511403.1	COGs: COG0093 Ribosomal protein L14; InterPro IPR000218:IPR019972:IPR005745; KEGG: aae:aq_1654 ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; SPTR: A8UWX3 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_005511404.1	COGs: COG0198 Ribosomal protein L24; InterPro IPR014723:IPR005825:IPR003256:IPR005824:IPR 008991; KEGG: aae:aq_1653 ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; SPTR: A8UWX5 Aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_005511405.1	COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: aae:aq_1652 50S ribosomal protein L5; PFAM: ribosomal protein L5; SPTR: A8UWX6 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_005511406.1	COGs: COG0199 Ribosomal protein S14; InterPro IPR018271:IPR001209; KEGG: hya:HY04AAS1_0278 ribosomal protein S14; PFAM: ribosomal protein S14; SPTR: A8UWX7 Ribosomal protein S14; PFAM: Ribosomal protein S14p/S29e
YP_005511407.1	COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: aae:aq_1651 ribosomal protein S08; PFAM: ribosomal protein S8; SPTR: A8UWX8 Ribosomal protein S08; PFAM: Ribosomal protein S8
YP_005511408.1	COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040:IPR002358:IPR019906:IPR000702; KEGG: hya:HY04AAS1_0280 ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: A8UWY0 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_005511409.1	COGs: COG0256 Ribosomal protein L18; InterPro IPR004389:IPR005484; KEGG: aae:aq_1648 ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; SPTR: A8UWY1 Ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_005511410.1	COGs: COG0098 Ribosomal protein S5; InterPro IPR014720:IPR014721:IPR013810:IPR018192:IPR 005712:IPR005324:IPR020568; KEGG: hya:HY04AAS1_0282 ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; SPTR: A8UWY2 Ribosomal protein S05; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_005511411.1	InterPro IPR018038:IPR005996:IPR000517:IPR016082; KEGG: aae:aq_1644 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: A8UWY3 Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle
YP_005511412.1	COGs: COG0200 Ribosomal protein L15; InterPro IPR001196:IPR005749; KEGG: saf:SULAZ_1736 ribosomal protein L15; PFAM: ribosomal protein L15; SPTR: A8UWY4 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_005511413.1	COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: hya:HY04AAS1_0285 preprotein translocase subunit SecY; PFAM: SecY protein; SPTR: A8UWY6 Preprotein translocase subunit secY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_005511414.1	COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850:IPR006259:IPR007862; KEGG: saf:SULAZ_1733 adenylate kinase (ATP-AMP transphosphorylase) (AK)(superoxide-inducible protein 16) (SOI16); PFAM: adenylate kinase; adenylate kinase lid domain protein; SPTR: A8UWY7 Adenylate kinase; TIGRFAM: adenylate kinase; PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases
YP_005511415.1	COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994:IPR002467:IPR001714; KEGG: aae:aq_076 methionyl aminopeptidase; PFAM: peptidase M24; SPTR: A8UWY8 Methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_005511416.1	COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR012340:IPR006196:IPR004368:IPR016027; KEGG: pmx:PERMA_1219 translation initiation factor IF-1; PFAM: S1 IF1 family protein; SPTR: C0QQP6 Translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_005511417.1	InterPro IPR000473; KEGG: aac:Aaci_2687 ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: C7H925 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_005511418.1	COGs: COG0099 Ribosomal protein S13; InterPro IPR001892:IPR018269:IPR019980:IPR010979; KEGG: aae:aq_074 30S ribosomal protein S13; PFAM: ribosomal protein S13; SPTR: O66486 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13
YP_005511419.1	COGs: COG0100 Ribosomal protein S11; InterPro IPR001971:IPR018102:IPR019981; KEGG: saf:SULAZ_1727 30S ribosomal protein S11; PFAM: ribosomal protein S11; SPTR: C1DX47 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_005511420.1	COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR002942:IPR018079:IPR005709:IPR001912; KEGG: aae:aq_072 30S ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; SMART: RNA-binding S4 domain protein; SPTR: O66484 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_005511421.1	COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterPro IPR011262:IPR011260:IPR011773:IPR011261:IPR 011263:IPR009025; KEGG: aae:aq_070 DNA-directed RNA polymerase subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: A8UW60 DNA-directed RNA polymerase alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_005511422.1	COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: aae:aq_069 ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: A8UW62 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_005511423.1	InterPro IPR003425; KEGG: hya:HY04AAS1_0295 protein of unknown function YGGT; PFAM: protein of unknown function YGGT; SPTR: A8UW63 Putative uncharacterized protein; PFAM: YGGT family
YP_005511424.1	COGs: COG1189 rRNA methylase; InterPro IPR002942:IPR004538:IPR002877; KEGG: aae:aq_773 hemolysin; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: O66971 Hemolysin; TIGRFAM: hemolysin A; PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein
YP_005511425.1	KEGG: aae:aq_1627 hypothetical protein; SPTR: O67549 Uncharacterized protein aq_1627
YP_005511426.1	KEGG: hya:HY04AAS1_1522 hypothetical protein; SPTR: A8UUP2 Putative uncharacterized protein
YP_005511427.1	KEGG: glo:Glov_3524 beta-lactamase domain protein; SPTR: A8UUP4 Putative uncharacterized protein
YP_005511428.1	COGs: COG0681 Signal peptidase I; InterPro IPR011056:IPR019756:IPR019757:IPR019758:IPR 000223:IPR019759:IPR015927; KEGG: hya:HY04AAS1_1140 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: B4U9L5 Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_005511429.1	COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR004383:IPR007197; KEGG: aae:aq_416 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: A8UUP6 Putative uncharacterized protein; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family
YP_005511430.1	InterPro IPR012675:IPR010038:IPR003749:IPR016155; KEGG: hya:HY04AAS1_0115 MoaD family protein; PFAM: thiamineS protein; SPTR: A8USB7 MoaD family protein; TIGRFAM: MoaD family protein; PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal
YP_005511431.1	KEGG: cpf:CPF_2372 selenocysteine-specific translation elongation factor; SPTR: A8UTG3 Type IV pilus assembly protein TapB
YP_005511432.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: aae:aq_1457 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: O67440 Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_005511433.1	COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterPro IPR001943:IPR014021:IPR001650:IPR004807:IPR 006935:IPR014001:IPR009055; KEGG: aae:aq_1856 excinuclease ABC subunit B; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8UVC5 UvrABC system protein B; TIGRFAM: excinuclease ABC, B subunit; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit
YP_005511434.1	COGs: COG0177 EndoIII-related endonuclease; InterPro IPR004036:IPR005759:IPR003265:IPR003651:IPR 011257; KEGG: dth:DICTH_0519 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: B5YCZ3 Endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III
YP_005511435.1	COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR020596:IPR011530:IPR001737:IPR020598; KEGG: aae:aq_1816 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: O67680 Ribosomal RNA small subunit methyltransferase A; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_005511436.1	COGs: COG0421 Spermidine synthase; InterPro IPR001045; KEGG: aae:aq_062 spermidine synthase; PFAM: Spermine synthase; SPTR: A8UWF7 Spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase
YP_005511437.1	COGs: COG0143 Methionyl-tRNA synthetase; InterPro IPR014729:IPR002304:IPR015413:IPR014758:IPR 009080; KEGG: aae:aq_1257 methionyl-tRNA synthetase alpha subunit; PFAM: tRNA synthetase class I (M); SPTR: A8UTD0 Methionyl-tRNA synthetase alpha subunit; TIGRFAM: methionyl-tRNA synthetase; PFAM: Anticodon-binding domain; tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase
YP_005511438.1	COGs: COG1391 Glutamine synthetase adenylyltransferase; InterPro IPR005190:IPR013546; KEGG: aae:aq_1774 glutamate ammonia ligase adenylyl-transferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; PRIAM: [Glutamate--ammonia-ligase] adenylyltransferase; SPTR: A8UU00 Glutamate ammonia ligase adenylyl-transferase; PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase
YP_005511439.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001969:IPR001173; KEGG: saf:SULAZ_0926 glycosyl transferase, group 2 family; PFAM: glycosyl transferase family 2; SPTR: C1DUW2 Glycosyl transferase, group 2 family; PFAM: Glycosyl transferase family 2
YP_005511440.1	COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; InterPro IPR005251:IPR011559:IPR000649; KEGG: aae:aq_2114 initiation factor eIF-2B alpha subunit; PFAM: initiation factor 2B related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: O67879 Methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase
YP_005511441.1	COGs: COG2269 Truncated possibly inactive lysyl-tRNA synthetase (class II); InterPro IPR006195:IPR004364; KEGG: aae:aq_763 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); PRIAM: Lysine--tRNA ligase; SPTR: A8UU36 Lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: lysyl-tRNA synthetase-related protein GenX
YP_005511442.1	COGs: COG0864 transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; InterPro IPR013321:IPR014864:IPR002145:IPR010985; KEGG: pmx:PERMA_0919 repressor; PFAM: NikR nickel binding; CopG domain protein DNA-binding domain protein; SPTR: C0QPW0 Putative nickel-responsive regulator; PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR
YP_005511443.1	COGs: COG2077 Peroxiredoxin; InterPro IPR012335:IPR017936:IPR018219:IPR013740:IPR 012336; KEGG: aae:aq_488 thiol peroxidase; PFAM: Redoxin domain protein; SPTR: O66780 Probable thiol peroxidase; PFAM: Redoxin
YP_005511444.1	COGs: COG0787 Alanine racemase; InterPro IPR020622:IPR000821:IPR001608:IPR011079:IPR 009006; KEGG: aae:aq_1827 alanine racemase; PFAM: alanine racemase domain protein; PRIAM: Alanine racemase; SPTR: O67687 Alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_005511445.1	COGs: COG1048 Aconitase A; InterPro IPR015931:IPR015932:IPR015928:IPR018136:IPR 006250:IPR001030:IPR000573; KEGG: aae:aq_1784 aconitate hydratase; PFAM: aconitate hydratase domain protein; SPTR: A8UUM9 Aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type; homoaconitate hydratase family protein
YP_005511446.1	COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR016040:IPR015955:IPR011275:IPR001236:IPR 001557; KEGG: aae:aq_1782 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: O67655 Malate dehydrogenase 1; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent
YP_005511447.1	COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: aae:aq_1780 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; PRIAM: Fumarate hydratase; SPTR: O67654 Fumarate hydratase (Fumarase); TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
YP_005511448.1	SPTR: A8UUM4 Putative uncharacterized protein
YP_005511449.1	KEGG: hya:HY04AAS1_0478 hypothetical protein; SPTR: A8UUM3 Putative uncharacterized protein
YP_005511450.1	COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR019814:IPR019815:IPR019813:IPR001288; KEGG: aae:aq_1777 initiation factor IF-3; PFAM: Translation initiation factor 3-like; SPTR: A8UUM1 Translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_005511451.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pai:PAE1278 trehalose synthase; PFAM: glycosyl transferase group 1; SPTR: A8USK9 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_005511452.1	KEGG: mtp:Mthe_0798 hypothetical protein; SPTR: A8USL1 Putative uncharacterized protein
YP_005511453.1	COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337:IPR006379:IPR001830; KEGG: mtp:Mthe_0799 HAD family hydrolase; PFAM: glycosyl transferase family 20; trehalose-phosphatase; SPTR: A0B7B4 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB
YP_005511454.1	KEGG: hypothetical protein; SPTR: A1ZG33 Putative uncharacterized protein
YP_005511455.1	COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V); InterPro IPR007581; KEGG: aae:aq_548 hypothetical protein; PFAM: Endonuclease V; PRIAM: Deoxyribonuclease V; SPTR: A8UXG3 Putative uncharacterized protein; PFAM: Endonuclease V
YP_005511456.1	COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR013785:IPR007197:IPR006638; KEGG: dtu:Dtur_1798 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8UTM5 Putative uncharacterized protein; PFAM: Radical SAM superfamily
YP_005511457.1	COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR018357:IPR007691:IPR001451:IPR011004; KEGG: hya:HY04AAS1_0200 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; SPTR: O66817 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_005511458.1	COGs: COG2825 Outer membrane protein; InterPro IPR005632; KEGG: aae:aq_157 hypothetical protein; PFAM: outer membrane chaperone Skp (OmpH); SPTR: A8UUA0 Putative uncharacterized protein; PFAM: Outer membrane protein (OmpH-like)
YP_005511459.1	COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterPro IPR004487:IPR010603:IPR013093:IPR019489:IPR 003593; KEGG: aae:aq_1337 ATP-dependent protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8UR94 ATP-dependent protease ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_005511460.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR018215:IPR001907; KEGG: aae:aq_1339 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: A8UR95 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_005511461.1	COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR008881:IPR005215:IPR008880; KEGG: aae:aq_1340 trigger factor; PFAM: trigger factor domain; trigger factor domain protein; SPTR: A8UR97 Trigger factor; TIGRFAM: trigger factor; PFAM: Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor
YP_005511462.1	COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR005801:IPR005256:IPR006805:IPR015890:IPR 019999; KEGG: aae:aq_582 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: O66849 Anthranilate synthase component 1; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages
YP_005511463.1	KEGG: aae:aq_581 hypothetical protein; SPTR: A8UXY1 Putative uncharacterized protein
YP_005511464.1	COGs: COG1867 N2 N2-dimethylguanosine tRNA methyltransferase; InterPro IPR002905; KEGG: aae:aq_841 N(2),N(2)-dimethylguanosine tRNA methyltransferase; PFAM: N2N2-dimethylguanosine tRNA methyltransferase; SPTR: A8UVZ8 N(2),N(2)-dimethylguanosine tRNA methyltransferase; PFAM: N2,N2-dimethylguanosine tRNA methyltransferase; TIGRFAM: tRNA(guanine-26,N2-N2) methyltransferase
YP_005511465.1	COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR000257:IPR006361; KEGG: aae:aq_334 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: A8UV79 Uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase
YP_005511466.1	COGs: COG2143 Thioredoxin-related protein; InterPro IPR000866:IPR012336; KEGG: aae:aq_1343 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A8UQL1 Putative uncharacterized protein
YP_005511467.1	COGs: COG0546 phosphatase; InterPro IPR006402:IPR006439:IPR005834:IPR005833; KEGG: aae:aq_1342 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8UQK9 Phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic
YP_005511468.1	KEGG: dde:Dde_1695 phosphoglucomutase; SPTR: A8UWD9 Putative uncharacterized protein
YP_005511469.1	COGs: COG0780 Enzyme related to GTP cyclohydrolase I; InterPro IPR016856:IPR020602; KEGG: aae:aq_931 hypothetical protein; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: PreQ(1) synthase; SPTR: A8URV7 Putative uncharacterized protein; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase
YP_005511470.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: aae:aq_1912 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: A8USN0 Putative uncharacterized protein; PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488)
YP_005511471.1	COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR006674:IPR003607; KEGG: aae:aq_1910 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: O67745 Putative uncharacterized protein; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_005511472.1	KEGG: aae:aq_1909 hypothetical protein; SPTR: A8USN3 ATP-dependent protease ATP-binding subunit
YP_005511473.1	KEGG: hypothetical protein; SPTR: A8UYA8 Putative uncharacterized protein
YP_005511474.1	COGs: COG1484 DNA replication protein; InterPro IPR002611; KEGG: aae:aq_910 DNA replication protein DnaC; PFAM: IstB domain protein ATP-binding protein; SPTR: A8URZ6 DNA replication protein DnaC; PFAM: IstB-like ATP binding protein
YP_005511475.1	COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: aae:aq_832 stationary phase survival protein SurE; PFAM: Survival protein SurE; SPTR: A8UY79 Stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE
YP_005511476.1	COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR010074:IPR000728:IPR010918:IPR016188; KEGG: aae:aq_1836 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: A8USS2 Phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II
YP_005511477.1	COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: aae:aq_1837 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; SPTR: O67692 Lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_005511478.1	COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; InterPro IPR003837; KEGG: aae:aq_2147a glutamyl-tRNA (Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase C subunit; SPTR: A8UQJ6 Glutamyl-tRNA (Gln) amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit
YP_005511479.1	COGs: COG0468 RecA/RadA recombinase; InterPro IPR020588:IPR020587:IPR020584:IPR013765:IPR 003593:IPR001553; KEGG: aae:aq_2150 recombinase A; PFAM: RecA domain protein; SMART: AAA ATPase; SPTR: A8UQJ4 Protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_005511480.1	COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482:IPR006321:IPR003593; KEGG: aae:aq_2151 twitching mobility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: A8UQJ3 Twitching mobility protein; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_005511481.1	COGs: COG0283 Cytidylate kinase; InterPro IPR003136:IPR011994; KEGG: aae:aq_2153 cytidylate kinase; PFAM: cytidylate kinase region; SPTR: O67907 Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_005511482.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016162:IPR015590:IPR016161; KEGG: aae:aq_186 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: O66573 Aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family
YP_005511483.1	InterPro IPR011991:IPR013249:IPR000792:IPR016032; KEGG: gur:Gura_0622 response regulator receiver protein; PFAM: Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; SPTR: A5GC71 Response regulator receiver protein; PFAM: Bacterial regulatory proteins, luxR family
YP_005511484.1	InterPro IPR007110:IPR000897; KEGG: KIAA0892; K11266 MAternally affected uncoordination; SPTR: C1MXQ4 Predicted protein
YP_005511485.1	COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR013785:IPR003733; KEGG: aae:aq_558 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; SPTR: A8USJ4 Thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_005511486.1	COGs: COG0258 5'-3' exonuclease (including N-terminal domain of PolI); InterPro IPR020046:IPR020047:IPR002421:IPR008918:IPR 020045; KEGG: aae:aq_1628 DNA polymerase I; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; SPTR: O67550 5'-3' exonuclease; PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain
YP_005511487.1	KEGG: aae:aq_406 hypothetical protein; SPTR: O66723 Putative uncharacterized protein; manually curated; PFAM: Uncharacterised protein family (UPF0104)
YP_005511488.1	InterPro IPR002934; KEGG: saf:SULAZ_0334 DNA polymerase, beta domain protein region; PFAM: DNA polymerase beta domain protein region; SPTR: C1DT91 DNA polymerase, beta domain protein region; PFAM: Nucleotidyltransferase domain
YP_005511489.1	KEGG: nis:NIS_1264 hypothetical protein; SPTR: A6Q4G3 Putative uncharacterized protein
YP_005511490.1	COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: aae:aq_1820 nodulation competitiveness protein NfeD; PFAM: protein of unknown function DUF107; SPTR: A8UTE4 Nodulation competitiveness protein NfeD; PFAM: Clp protease; NfeD-like
YP_005511491.1	COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: hya:HY04AAS1_0233 ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: B4U714 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_005511492.1	COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR012281:IPR003664; KEGG: aae:aq_1101 putative glycerol-3-phosphate acyltransferase PlsX; PFAM: fatty acid synthesis plsX protein; SPTR: O67186 Fatty acid/phospholipid synthesis protein plsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX
YP_005511493.1	COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR016038:IPR004655:IPR013751:IPR013747:IPR 016039; KEGG: aae:aq_1099 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: A8UUZ2 Tryptophan synthase subunit beta; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_005511494.1	COGs: COG0474 Cation transport ATPase; InterPro IPR018303:IPR006415:IPR001757:IPR004014:IPR 008250:IPR005834:IPR006068; KEGG: sul:SYO3AOP1_0795 magnesium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; PRIAM: Magnesium-importing ATPase; SPTR: B2V905 Magnesium-translocating P-type ATPase; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase
YP_005511495.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014021:IPR001650:IPR014014:IPR011545:IPR 014001; KEGG: hya:HY04AAS1_0299 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: B4U778 DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_005511496.1	COGs: COG2041 Sulfite oxidase; InterPro IPR000572:IPR005066:IPR017909:IPR006311:IPR 019546:IPR008335:IPR014756; KEGG: sul:SYO3AOP1_0084 oxidoreductase molybdopterin binding; PFAM: oxidoreductase molybdopterin binding; Twin-arginine translocation pathway, signal sequence, subgroup; Mo-co oxidoreductase dimerisation domain; SPTR: B2V6K0 Oxidoreductase molybdopterin binding; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_005511497.1	InterPro IPR009056; KEGG: sul:SYO3AOP1_0083 cytochrome c oxidoreductase subunit B; SPTR: B9Z8V9 Cytochrome c oxidoreductase subunit B
YP_005511498.1	COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR011777:IPR006076:IPR003042; KEGG: aae:aq_104 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: A8URP5 Putative uncharacterized protein; TIGRFAM: geranylgeranyl reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: geranylgeranyl reductase family
YP_005511499.1	COGs: COG1659 conserved hypothetical protein; InterPro IPR007544; KEGG: aae:aq_1760 hypothetical protein; PFAM: Linocin_M18 bacteriocin protein; SPTR: A8UW07 Putative uncharacterized protein; PFAM: Encapsulating protein for peroxidase
YP_005511500.1	InterPro IPR012287:IPR001647:IPR009057; KEGG: hya:HY04AAS1_0353 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: A8UY04 Transcriptional regulator (TetR/AcrR family) protein; PFAM: Bacterial regulatory proteins, tetR family
YP_005511501.1	COGs: COG0274 Deoxyribose-phosphate aldolase; InterPro IPR013785:IPR011343:IPR002915; KEGG: aae:aq_148 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: A8UST9 Deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_005511502.1	COGs: COG0492 Thioredoxin reductase; InterPro IPR008255:IPR013027:IPR000103; KEGG: hya:HY04AAS1_0845 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B4U8S1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_005511503.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR013785:IPR000891:IPR002034:IPR005671:IPR 013709; KEGG: aae:aq_2090 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; SPTR: O67862 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type
YP_005511504.1	COGs: COG2187 conserved hypothetical protein; InterPro IPR011009; KEGG: aae:aq_288 hypothetical protein; SPTR: O66641 Putative uncharacterized protein
YP_005511505.1	COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR015323:IPR013027:IPR016156; KEGG: sul:SYO3AOP1_0519 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; SPTR: B2V886 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding
YP_005511506.1	COGs: COG0723 Rieske Fe-S protein; InterPro IPR017941:IPR006311; KEGG: saf:SULAZ_1678 Rieske-I iron sulfur protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: C1DWZ9 Rieske-I iron sulfur protein; PFAM: Rieske [2Fe-2S] domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_005511507.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR017909:IPR006311:IPR013027:IPR015323; KEGG: aae:aq_232 flavocytochrome c sulfide dehydrogenase; PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: O66598 Flavocytochrome C sulfide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding
YP_005511508.1	COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR013785:IPR003733; KEGG: aae:aq_1366 thiamine phosphate synthase; PFAM: thiamine monophosphate synthase; SPTR: O67378 Uncharacterized protein aq_1366; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_005511509.1	COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: hya:HY04AAS1_1495 integral membrane protein MviN; PFAM: virulence factor MVIN family protein; SPTR: A8UUI9 Putative uncharacterized protein; TIGRFAM: integral membrane protein MviN; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_005511510.1	COGs: COG0268 Ribosomal protein S20; InterPro IPR002583; KEGG: aae:aq_1767 ribosomal protein S20; PFAM: ribosomal protein S20; SPTR: A8UUJ0 Ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_005511511.1	COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627:IPR000045:IPR014032; KEGG: aae:aq_1601 type 4 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; PRIAM: Prepilin peptidase; SPTR: O67535 Type 4 prepilin peptidase; PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family
YP_005511512.1	COGs: COG1618 nucleotide kinase; InterPro IPR004948:IPR003593; KEGG: aae:aq_1292 putative NTPase; PFAM: protein of unknown function DUF265; PRIAM: Nucleoside-triphosphatase; SMART: AAA ATPase; SPTR: O67322 Nucleoside-triphosphatase THEP1; PFAM: Protein of unknown function, DUF265
YP_005511513.1	COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR013817:IPR013816:IPR011761:IPR005479:IPR 005481:IPR011607:IPR012607:IPR005483:IPR016185; KEGG: aae:aq_1172 carbamoyl-phosphate synthase large subunit; PFAM: MGS domain protein; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthase L chain ATP-binding; 30S ribosomal subunit S22; SPTR: A8UTC2 Carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_005511514.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR001789:IPR002197:IPR003593:IPR 020441:IPR011006:IPR009057; KEGG: aae:aq_1117 NtrC family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: O67198 Transcriptional regulator (NtrC family); PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_005511515.1	COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551:IPR004518; KEGG: aae:aq_342 hypothetical protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: O66673 Putative uncharacterized protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein
YP_005511516.1	KEGG: cyh:Cyan8802_4008 hypothetical protein; SPTR: C7QRR4 Putative uncharacterized protein
YP_005511517.1	COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR016040:IPR000594:IPR007901:IPR009036; KEGG: aae:aq_1329 molybdopterin biosynthesis protein MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SPTR: O67348 Molybdopterin biosynthesis protein MoeB; PFAM: MoeZ/MoeB domain; ThiF family
YP_005511518.1	COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813:IPR016117; KEGG: aae:aq_970 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: A8UVX3 Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase
YP_005511519.1	COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003594:IPR005467:IPR000014:IPR003660:IPR 013656:IPR003661:IPR004358:IPR009082; KEGG: aae:aq_1115 histidine kinase sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: A8UUR1 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005511520.1	COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: aae:aq_1113 hypothetical protein; PFAM: protein of unknown function DUF534; SPTR: A8UUQ9 Putative uncharacterized protein; PFAM: ABC transporter substrate binding protein
YP_005511521.1	COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR016040:IPR013328:IPR006168:IPR011128:IPR 006109:IPR008927; KEGG: aae:aq_1634 glycerol-3-phosphate dehydrogenase (NAD+); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: A8UXI2 Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_005511522.1	COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR013758:IPR013757:IPR002205:IPR006691:IPR 013760; KEGG: aae:aq_980 DNA gyrase A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: A8UVW0 DNA gyrase A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller
YP_005511523.1	InterPro IPR000408:IPR004477; KEGG: aae:aq_1618 hypothetical protein; PFAM: ComEC/Rec2-related protein; SPTR: A8UTX5 Putative uncharacterized protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein
YP_005511524.1	COGs: COG1199 Rad3-related DNA helicase; InterPro IPR014013:IPR014001:IPR006555; KEGG: aae:aq_358 ATP-dependent helicase DinG; SMART: helicase c2; DEAD-like helicase; SPTR: A8URH3 ATP-dependent helicase (DinG family) protein; manually curated; PFAM: DEAD/DEAH box helicase
YP_005511525.1	COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: aav:Aave_4145 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q7BG52 Wzt; PFAM: ABC transporter
YP_005511526.1	COGs: COG0538 Isocitrate dehydrogenase; InterPro IPR019818:IPR001804; KEGG: hya:HY04AAS1_1432 isocitrate/isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Q76LM6 Isocitrate dehydrogenase [NADP]; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type
YP_005511527.1	COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: hya:HY04AAS1_0580 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: B4U806 Cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_005511528.1	KEGG: bte:BTH_II1419 hypothetical protein; SPTR: A8UTN8 Putative uncharacterized protein
YP_005511529.1	COGs: COG0648 Endonuclease IV; InterPro IPR013022:IPR001719:IPR018246:IPR012307; KEGG: aae:aq_1629 deoxyribonuclease IV; PFAM: Xylose isomerase domain protein TIM barrel; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: AP endonuclease family 2; SPTR: O67551 Probable endonuclease 4; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)
YP_005511530.1	COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: aae:aq_1630 hypothetical protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: A8UR79 Putative uncharacterized protein; PFAM: DHH family; DHHA1 domain
YP_005511531.1	COGs: COG0060 Isoleucyl-tRNA synthetase; InterPro IPR014729:IPR001412:IPR002301:IPR002300:IPR 013155:IPR010663:IPR015905:IPR009080:IPR009008; KEGG: aae:aq_305 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; zinc finger Fpg domain protein; SPTR: A8UR80 Isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase
YP_005511532.1	COGs: COG0186 Ribosomal protein S17; InterPro IPR012340:IPR000266:IPR019979:IPR019984:IPR 016027; KEGG: aae:aq_020 30S ribosomal protein S17; PFAM: ribosomal protein S17; SPTR: O66439 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_005511533.1	InterPro IPR001854; KEGG: aae:aq_018a 50S ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: A8UWN7 50S Ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_005511534.1	COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR020798:IPR000114:IPR016180; KEGG: hya:HY04AAS1_0272 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: A8UWN6 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_005511535.1	COGs: COG0092 Ribosomal protein S3; InterPro IPR015946:IPR001351:IPR004044:IPR018280:IPR 005704:IPR008282:IPR004087:IPR009019; KEGG: hya:HY04AAS1_0271 ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; SPTR: B4U750 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_005511536.1	COGs: COG0091 Ribosomal protein L22; InterPro IPR001063:IPR018260:IPR005727; KEGG: saf:SULAZ_1751 ribosomal protein L22; PFAM: ribosomal protein L22/L17; SPTR: A8UWN3 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_005511537.1	COGs: COG0185 Ribosomal protein S19; InterPro IPR002222:IPR005732; KEGG: hya:HY04AAS1_0269 ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: B4U748 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; ribosomal protein S19(archaeal)/S15(eukaryotic)
YP_005511538.1	COGs: COG0090 Ribosomal protein L2; InterPro IPR012340:IPR014722:IPR002171:IPR005880:IPR 008991:IPR016027; KEGG: aae:aq_013 50S ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: A8UWN1 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_005511539.1	COGs: COG0089 Ribosomal protein L23; InterPro IPR012677:IPR013025:IPR012678; KEGG: aae:aq_012 ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: A8UWM9 50S ribosomal protein L23; PFAM: Ribosomal protein L23
YP_005511540.1	COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: aae:aq_011 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: A8UWM8 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family
YP_005511541.1	COGs: COG0087 Ribosomal protein L3; InterPro IPR019926:IPR019927:IPR000597:IPR009000; KEGG: aae:aq_009 ribosomal protein L03; PFAM: ribosomal protein L3; SPTR: A8UWM6 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_005511542.1	COGs: COG0051 Ribosomal protein S10; InterPro IPR001848:IPR018268:IPR005731; KEGG: aae:aq_008 ribosomal protein S10; PFAM: ribosomal protein S10; SPTR: O66430 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_005511543.1	COGs: COG0050 GTPase - translation elongation factors; InterPro IPR000795:IPR004541:IPR005225:IPR004161:IPR 004160:IPR009001:IPR009000; KEGG: hya:HY04AAS1_0263 elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: B4U729 Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_005511544.1	COGs: COG0480 Translation elongation factors (GTPase); InterPro IPR014721:IPR000640:IPR000795:IPR004540:IPR 005225:IPR004161:IPR005517:IPR020568:IPR009000:IPR009022; KEGG: aae:aq_001 elongation factor EF-G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; SPTR: A8UYL8 Putative uncharacterized protein; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_005511545.1	COGs: COG0049 Ribosomal protein S7; InterPro IPR000235:IPR005717; KEGG: aae:aq_734 30S ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: O66944 30S ribosomal protein S7-2; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_005511546.1	COGs: COG0048 Ribosomal protein S12; InterPro IPR012340:IPR006032:IPR005679:IPR016027; KEGG: hya:HY04AAS1_0260 30S ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: B4U739 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_005511547.1	COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; InterPro IPR007080:IPR000722:IPR012754:IPR007066:IPR 007083:IPR007081:IPR006592:IPR011054; KEGG: aae:aq_1945 RNA polymerase beta prime subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; SPTR: O67763 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_005511548.1	COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterPro IPR007121:IPR010243:IPR007644:IPR007642:IPR 007645:IPR019462:IPR007120:IPR007641; KEGG: aae:aq_1939 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; SPTR: O67762 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_005511549.1	COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR014719:IPR013823:IPR000206:IPR008932; KEGG: hya:HY04AAS1_0257 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: B4U736 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_005511550.1	COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: hya:HY04AAS1_0256 ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: B4U735 Ribosomal protein L10; PFAM: Ribosomal protein L10
YP_005511551.1	COGs: COG0081 Ribosomal protein L1; InterPro IPR016094:IPR002143:IPR005878; KEGG: aae:aq_1935 50S ribosomal protein L1; PFAM: ribosomal protein L1; SPTR: A8UYN3 Ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_005511552.1	COGs: COG0080 Ribosomal protein L11; InterPro IPR020784:IPR020783:IPR020785:IPR006519:IPR 000911; KEGG: aae:aq_1933 ribosomal protein L11; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: O67758 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_005511553.1	COGs: COG0250 Transcription antiterminator; InterPro IPR014722:IPR015869:IPR001062:IPR006645:IPR 005824:IPR008991; KEGG: aae:aq_1931 transcription antitermination protein NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein; SPTR: O67757 Transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG
YP_005511554.1	InterPro IPR005807:IPR001901; KEGG: aae:aq_1930b preprotein translocase subunit SecE; PFAM: protein secE/sec61-gamma protein; SPTR: D0VWU4 SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_005511555.1	InterPro IPR018264:IPR001705; KEGG: aae:aq_1930a 50S ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: O67756 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_005511556.1	COGs: COG0050 GTPase - translation elongation factors; InterPro IPR000795:IPR004541:IPR005225:IPR004161:IPR 004160:IPR009001:IPR009000; KEGG: hya:HY04AAS1_0263 elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: B4U729 Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_005511557.1	KEGG: GH20174 gene product from transcript GH20174-RA ; K13138 integrator complex subunit 1; SPTR: C6N7V8 Putative uncharacterized protein; PFAM: Bacterial cellulose synthase subunit
YP_005511558.1	COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: aae:aq_1138 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: A8UWV9 Ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family
YP_005511559.1	KEGG: hya:HY04AAS1_0092 hypothetical protein; SPTR: A8UQP1 Putative uncharacterized protein
YP_005511560.1	COGs: COG0069 Glutamate synthase domain 2; InterPro IPR006982:IPR002489:IPR002932:IPR017932:IPR 000583:IPR013785; KEGG: aae:aq_1565 glutamate synthase large subunit; PFAM: glutamate synthase; ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: A1IJT7 Ferredoxin-dependent glutamate synthase; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_005511561.1	KEGG: aae:aq_1428 hypothetical protein; SPTR: A8UYQ3 Putative uncharacterized protein
YP_005511562.1	COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR013785:IPR018089:IPR014732:IPR001754:IPR 011060; KEGG: pmx:PERMA_0426 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: A8UVH9 Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1
YP_005511563.1	COGs: COG0118 Glutamine amidotransferase; InterPro IPR017926:IPR010139:IPR000991:IPR016226; KEGG: aae:aq_732 imidazole glycerol phosphate synthase subunit HisH; PFAM: glutamine amidotransferase class-I; SPTR: C4FHW0 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_005511564.1	COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: aae:aq_731 cytochrome c-type biogenesis protein; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: A8UT81 Cytochrome c-type biogenesis protein; PFAM: Cytochrome C biogenesis protein transmembrane region
YP_005511565.1	COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR012335:IPR017936:IPR017937:IPR000866:IPR 012336; KEGG: dtu:Dtur_1223 redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A8UU88 Alkyl hydroperoxide reductase; PFAM: AhpC/TSA family
YP_005511566.1	COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: saf:SULAZ_0952 putative transposase DNA-binding domain family; PFAM: transposase IS605 OrfB; SPTR: C1DUY8 Putative transposase DNA-binding domain family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; TIGRFAM: transposase, IS605 OrfB family, central region
YP_005511567.1	COGs: COG2452 site-specific integrase-resolvase; InterPro IPR006119:IPR006118:IPR010093:IPR000551:IPR 009061; KEGG: adg:Adeg_0131 DNA binding domain protein, excisionase family; PFAM: Resolvase domain; regulatory protein MerR; SPTR: C9RAL9 DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; Resolvase, N terminal domain; TIGRFAM: DNA binding domain, excisionase family
YP_005511568.1	KEGG: nis:NIS_0466 hypothetical protein; SPTR: C0W9L6 Putative uncharacterized protein
YP_005511569.1	KEGG: plu:plu3449 hypothetical protein; SPTR: Q7N1M2 Similar to probable DNA adenine methylase of a bacteriophage
YP_005511570.1	KEGG: nis:NIS_0468 hypothetical protein; SPTR: A6Q273 Putative uncharacterized protein
YP_005511571.1	COGs: COG5362 Phage-related terminase; InterPro IPR006517; KEGG: pmx:PERMA_1815 hypothetical protein; SPTR: C0QSD2 Putative uncharacterized protein; TIGRFAM: phage uncharacterized protein; PFAM: Terminase-like family; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain
YP_005511572.1	KEGG: pmx:PERMA_1814 hypothetical protein; SPTR: C0QSD1 Putative uncharacterized protein
YP_005511573.1	KEGG: pmx:PERMA_1813 hypothetical protein; SPTR: C0QSD0 Putative uncharacterized protein
YP_005511574.1	KEGG: pmo:Pmob_0083 phosphodiesterase; SPTR: A9BEV4 2',3'-cyclic-nucleotide 2'-phosphodiesterase
YP_005511576.1	KEGG: ses:SARI_00427 ethanolamine ammonia-lyase small subunit; SPTR: Q22SJ1 Putative uncharacterized protein
YP_005511577.1	KEGG: GD24847 gene product from transcript GD24847-RA; SPTR: D1JNV9 Putative uncharacterized protein
YP_005511578.1	KEGG: ITGA2; integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor); K06481 integrin alpha 2; SPTR: Q8FP14 Putative uncharacterized protein
YP_005511579.1	KEGG: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase ; K09699 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase); SPTR: A5C2N6 Putative uncharacterized protein
YP_005511580.1	KEGG: dvl:Dvul_1076 tail tape meausure protein, putative; SPTR: A1VCD0 Tail tape meausure protein, putative
YP_005511582.1	KEGG: Os04g0421700; hypothetical protein; SPTR: Q7XMG4 OSJNBa0028I23.18 protein
YP_005511583.1	KEGG: hch:HCH_02908 hypothetical protein; SPTR: Q2SI42 Putative uncharacterized protein
YP_005511584.1	KEGG: dia:Dtpsy_3200 hypothetical protein; SPTR: B9MH03 Putative uncharacterized protein
YP_005511585.1	KEGG: hypothetical protein; SPTR: A3WD52 Putative uncharacterized protein
YP_005511586.1	COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR011056:IPR001387:IPR019756:IPR019759:IPR 015927:IPR010982; KEGG: gem:GM21_0647 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Peptidase S24/S26A/S26B, conserved region; SMART: helix-turn-helix domain protein; SPTR: A7VTE0 Putative uncharacterized protein; PFAM: Helix-turn-helix; Peptidase S24-like
YP_005511587.1	KEGG: pmx:PERMA_1797 hypothetical protein; SPTR: C0QSB4 Putative uncharacterized protein
YP_005511588.1	KEGG: lin:lin0827 hypothetical protein; SPTR: Q92DI6 Lin0827 protein
YP_005511589.1	SPTR: B6FM65 Putative uncharacterized protein
YP_005511590.1	KEGG: GK10161 gene product from transcript GK10161-RA; SPTR: B4ND46 GK10161
YP_005511591.1	InterPro IPR001387:IPR003115:IPR009057:IPR009061; KEGG: pmx:PERMA_1795 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: ParB domain protein nuclease; helix-turn-helix domain protein; SPTR: A8UX04 Chromosome partitioning protein; PFAM: Helix-turn-helix; ParB-like nuclease domain
YP_005511592.1	InterPro IPR001584:IPR012337; KEGG: pmx:PERMA_1794 integrase core domain protein; PFAM: Integrase catalytic region; SPTR: C0QSB1 Integrase core domain protein; PFAM: Integrase core domain
YP_005511593.1	KEGG: pmx:PERMA_1793 hypothetical protein; SPTR: C0QSB0 Putative uncharacterized protein; PFAM: ATPase family associated with various cellular activities (AAA)
YP_005511594.1	KEGG: pmx:PERMA_1792 hypothetical protein; SPTR: C0QSA9 Putative uncharacterized protein
YP_005511595.1	KEGG: pmx:PERMA_1791 hypothetical protein; SPTR: C0QSA8 Putative uncharacterized protein
YP_005511596.1	KEGG: similar to CG8112-PA; K00637 sterol O-acyltransferase; SPTR: D1JDB5 Putative uncharacterized protein
YP_005511597.1	KEGG: pmx:PERMA_1790 hypothetical protein; SPTR: C0QSA7 Putative uncharacterized protein
YP_005511598.1	InterPro IPR010093:IPR000551:IPR009061; KEGG: acl:ACL_0586 DNA-binding excisionase-like protein; PFAM: regulatory protein MerR; SPTR: B6RT33 Truncated MerR-like protein; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family
YP_005511599.1	KEGG: tme:Tmel_1459 hypothetical protein; SPTR: A6LN05 Putative uncharacterized protein
YP_005511600.1	KEGG: hypothetical protein; SPTR: Q54KW6 Putative uncharacterized protein DDB_G0287113
YP_005511601.1	KEGG: sty:HCM2.0067c hypothetical protein; SPTR: Q934Z9 Putative uncharacterized protein HCM2.0067c
YP_005511602.1	KEGG: cff:CFF8240_0648 hypothetical protein; SPTR: A0RNP0 Gp27; PFAM: Bacteriophage protein of unknown function (DUF646)
YP_005511603.1	KEGG: hypothetical protein; SPTR: C7IJA1 Bacteriocin/lantibiotic exporter, bacteriocin-binding protein
YP_005511604.1	KEGG: hypothetical protein; SPTR: B7G5C7 Predicted protein
YP_005511605.1	KEGG: syw:SYNW2390 putative alkaline phosphatase/5' nucleotidase; SPTR: Q8V9M7 Putative uncharacterized protein
YP_005511606.1	KEGG: hypothetical protein; SPTR: Q54QL9 Putative uncharacterized protein
YP_005511608.1	KEGG: hypothetical protein
YP_005511609.1	KEGG: similar to GA20615-PA; K10405 kinesin family member C1; SPTR: Q7Q6B6 AGAP005934-PA
YP_005511610.1	KEGG: transporter, putative; SPTR: B2WNR6 Putative uncharacterized protein
YP_005511611.1	KEGG: hypothetical protein; SPTR: B9CTD7 Putative membrane protein
YP_005511612.1	KEGG: hypothetical protein; SPTR: B6AIE9 Putative uncharacterized protein
YP_005511613.1	COGs: COG2200 FOG: EAL domain; InterPro IPR000014:IPR000160:IPR003018:IPR001610:IPR 001633:IPR013767:IPR000700; KEGG: aae:aq_1442 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; GAF domain protein; PAC repeat-containing protein; SPTR: A8UUX8 Preprotein translocase ATPase subunit; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005511614.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; Contains selenocysteine; InterPro IPR006443:IPR006311:IPR009010:IPR006963:IPR 006656:IPR006657:IPR006655:IPR017909; KEGG: aae:aq_1039 formate dehydrogenase alpha subunit; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: O67146 Formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; manually curated; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type; Tat (twin-arginine translocation) pathway signal sequence
YP_005511615.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006470:IPR001450:IPR015246:IPR017900:IPR 014603:IPR017896; KEGG: aae:aq_1046 formate dehydrogenase beta subunit; PFAM: Formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: O67147 Formate dehydrogenase beta subunit; TIGRFAM: formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase N, transmembrane; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing
YP_005511616.1	COGs: COG2864 Cytochrome b subunit of formate dehydrogenase; InterPro IPR006471:IPR016174; KEGG: aae:aq_1049 formate dehydrogenase gamma subunit; SPTR: O67148 Formate dehydrogenase gamma subunit; TIGRFAM: formate dehydrogenase, gamma subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit
YP_005511617.1	COGs: COG2032 Cu/Zn superoxide dismutase; InterPro IPR001424:IPR018152; KEGG: aae:aq_1050 superoxide dismutase (Cu/Zn); PFAM: superoxide dismutase copper/zinc binding; SPTR: O67149 Superoxide dismutase [Cu-Zn] 1; PFAM: Copper/zinc superoxide dismutase (SODC)
YP_005511618.1	COGs: COG3058 Uncharacterized protein involved in formate dehydrogenase formation; InterPro IPR006452; KEGG: aae:aq_1051 formate dehydrogenase formation protein FdhE; PFAM: formate dehydrogenase accessory protein; SPTR: O67150 Protein fdhE homolog; PFAM: Protein involved in formate dehydrogenase formation; TIGRFAM: formate dehydrogenase accessory protein FdhE
YP_005511619.1	COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR002930:IPR011053; KEGG: aae:aq_1052 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: A8UVJ8 Glycine cleavage system protein H; PFAM: Glycine cleavage H-protein
YP_005511620.1	COGs: COG3581 conserved hypothetical protein; InterPro IPR018709; KEGG: sus:Acid_0921 hypothetical protein; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; SPTR: A8UV53 Putative uncharacterized protein; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component
YP_005511621.1	COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275:IPR002731; KEGG: sus:Acid_0922 putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: A8UV51 Putative uncharacterized protein; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative
YP_005511622.1	COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sat:SYN_01995 export ABC transporter permease protein; PFAM: protein of unknown function DUF214; SPTR: Q2LU96 Export ABC transporter permease protein; PFAM: Predicted permease
YP_005511623.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: coc:Coch_0175 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7M538 ABC transporter related; PFAM: ABC transporter
YP_005511624.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: tye:THEYE_A0120 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: B5YHF0 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005511625.1	InterPro IPR000326:IPR016118; KEGG: aae:aq_1706 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: O67603 Putative uncharacterized protein; PFAM: PAP2 superfamily
YP_005511626.1	KEGG: sul:SYO3AOP1_1611 hypothetical protein; SPTR: A8UT96 Putative uncharacterized protein
YP_005511627.1	COGs: COG0084 Mg-dependent DNase; InterPro IPR015991:IPR001130:IPR007197:IPR018228; KEGG: aae:aq_2060 hypothetical protein; PFAM: TatD-related deoxyribonuclease; Radical SAM domain protein; SPTR: A8UV45 Putative uncharacterized protein; TIGRFAM: hydrolase, TatD family; PFAM: Radical SAM superfamily; TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_005511629.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: aae:aq_2191 cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I; SPTR: A8UU92 Cytochrome c oxidase subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I
YP_005511630.1	COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR014222:IPR011759:IPR008972:IPR002429:IPR 001505:IPR015964; KEGG: aae:aq_2190 cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; SPTR: A8UU91 Cytochrome c oxidase subunit 2; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II
YP_005511631.1	InterPro IPR012335:IPR012336; KEGG: aae:aq_2189 hypothetical protein; SPTR: A8URQ4 Putative uncharacterized protein; PFAM: SCO1/SenC
YP_005511632.1	COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: aae:aq_2188 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III; SPTR: A8UU90 Cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase subunit III
YP_005511633.1	COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR006664; KEGG: pmx:PERMA_0100 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: A8UVX1 Putative uncharacterized protein; PFAM: OmpA family
YP_005511634.1	COGs: COG1490 D-Tyr-tRNAtyr deacylase; InterPro IPR003732; KEGG: aae:aq_428 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: A8US95 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_005511635.1	COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367:IPR016040; KEGG: aae:aq_1237 siroheme synthase; SPTR: O67282 Siroheme synthase; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain
YP_005511636.1	COGs: COG0031 Cysteine synthase; InterPro IPR005858:IPR005856:IPR001926:IPR001216; KEGG: aae:aq_1556 cysteine synthase, O-acetylserine (thiol) lyase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A8UW08 Cysteine synthase; TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B
YP_005511637.1	COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR006004:IPR012285:IPR013027:IPR000103:IPR 009051; KEGG: aae:aq_2064 glutamate synthase small subunit GltD; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: O67845 Glutamate synthase small subunit gltD; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric
YP_005511638.1	KEGG: aae:aq_142 hypothetical protein; SPTR: O66537 Uncharacterized protein aq_142
YP_005511639.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: aae:aq_145 ADP-heptose:LPS heptosyltransferase; PFAM: glycosyl transferase family 9; SPTR: O66538 ADP-heptose:LPS heptosyltransferase; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II
YP_005511640.1	COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: aae:aq_1875 hypothetical protein; PFAM: methyltransferase; SPTR: A8UUK6 Putative uncharacterized protein; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_005511641.1	KEGG: hya:HY04AAS1_0854 hypothetical protein; SPTR: A8UUK5 Putative uncharacterized protein
YP_005511642.1	COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: aae:aq_203 ATP synthase F1 gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: A8UUE4 ATP synthase F1 gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_005511643.1	COGs: COG0162 Tyrosyl-tRNA synthetase; InterPro IPR002307:IPR014729:IPR002305:IPR002942:IPR 001412; KEGG: aae:aq_1751 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; SPTR: A8UQM7 Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_005511644.1	COGs: COG0717 Deoxycytidine deaminase; InterPro IPR011962:IPR008180; KEGG: hya:HY04AAS1_0561 deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; SPTR: B4U7Y7 Deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase
YP_005511645.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: aae:aq_1585 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: A8UVC2 Putative uncharacterized protein; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family
YP_005511646.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: aae:aq_417 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: O66733 ABC transporter; PFAM: ABC transporter
YP_005511647.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: aae:aq_1899 dolichol-phosphate mannosyltransferase; PFAM: glycosyl transferase family 2; SPTR: O67737 Dolichol-phosphate mannosyltransferase; PFAM: Glycosyl transferase family 2
YP_005511648.1	COGs: COG3272 conserved hypothetical protein; InterPro IPR007553:IPR013560; KEGG: dtu:Dtur_1655 protein of unknown function DUF1722; PFAM: Protein of unknown function DUF1722; protein of unknown function DUF523; SPTR: B8E353 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722)
YP_005511649.1	COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977; KEGG: aae:aq_1985 hypothetical protein; PRIAM: Dephospho-CoA kinase; SPTR: O67792 Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_005511650.1	COGs: COG0247 Fe-S oxidoreductase; InterPro IPR012285:IPR001450:IPR004017:IPR017900:IPR 012257:IPR017896:IPR009051; KEGG: aae:aq_1639 oxido/reductase iron sulfur protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8UY93 Oxido/reductase iron sulfur protein; PFAM: Cysteine-rich domain
YP_005511651.1	COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR006311:IPR013027:IPR015323:IPR017909; KEGG: sul:SYO3AOP1_0521 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; SPTR: B2V888 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Flavocytochrome c sulphide dehydrogenase, flavin-binding; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_005511652.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR004358:IPR005467:IPR 009082; KEGG: aae:aq_231 histidine kinase sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8UVW7 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005511653.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR011006:IPR 009057; KEGG: aae:aq_230 NtrC family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: O66596 Transcriptional regulator (NtrC family); PFAM: Response regulator receiver domain; Sigma-54 interaction domain
YP_005511654.1	COGs: COG1159 GTPase; InterPro IPR005225:IPR005662:IPR015946:IPR002917:IPR 004044:IPR009019; KEGG: aae:aq_1994 GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; SPTR: A8USH5 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain
YP_005511655.1	KEGG: aae:aq_126 hypothetical protein; SPTR: A8URL5 Putative uncharacterized protein
YP_005511656.1	COGs: COG0863 DNA modification methylase; InterPro IPR002941:IPR017985:IPR001091; KEGG: dth:DICTH_0253 m4C-methyltransferase; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: B5YC28 M4C-methyltransferase; manually curated; PFAM: DNA methylase
YP_005511657.1	KEGG: hya:HY04AAS1_0475 hypothetical protein; SPTR: B4U7Q2 Putative uncharacterized protein
YP_005511658.1	COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); InterPro IPR000711; KEGG: aae:aq_1588 ATP synthase F1 delta chain; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; SPTR: A8UR48 ATP synthase; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit
YP_005511659.1	InterPro IPR002146; KEGG: aae:aq_1587 ATP synthase F0 subunit B; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: A8UR49 ATP synthase F0 subunit b; PFAM: ATP synthase B/B' CF(0)
YP_005511660.1	InterPro IPR002146; KEGG: aae:aq_1586 ATP synthase F0 subunit B; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: A8UR50 ATP synthase F0 subunit b; PFAM: ATP synthase B/B' CF(0)
YP_005511661.1	COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR020817:IPR001453:IPR008284; KEGG: aae:aq_061 molybdenum cofactor biosynthesis protein; PFAM: molybdopterin binding domain; SPTR: O66472 Molybdenum cofactor biosynthesis MOG; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_005511662.1	COGs: COG0148 Enolase; InterPro IPR000941:IPR020811:IPR020810:IPR020809; KEGG: aae:aq_484 enolase; PFAM: Enolase-like; PRIAM: Phosphopyruvate hydratase; SPTR: O66778 Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_005511663.1	KEGG: hya:HY04AAS1_1254 hypothetical protein; SPTR: A8USW7 Putative uncharacterized protein; PFAM: Septum formation initiator
YP_005511664.1	COGs: COG0117 Pyrimidine deaminase; InterPro IPR004794:IPR011549:IPR002125:IPR002734:IPR 016192:IPR016193; KEGG: aae:aq_138 riboflavin specific deaminase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: O66534 Riboflavin biosynthesis protein ribD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD
YP_005511665.1	COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR005793:IPR001555:IPR 011034; KEGG: aae:aq_2131 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; SPTR: O67890 Methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_005511666.1	COGs: COG2445 conserved hypothetical protein; InterPro IPR008201; KEGG: aae:aq_1668 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: A8UVR4 Putative uncharacterized protein; PFAM: Protein of unknown function DUF86
YP_005511667.1	COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041:IPR006058:IPR012675:IPR012285:IPR 009051:IPR017900:IPR004489; KEGG: aae:aq_553 fumarate reductase iron-sulfur subunit; SPTR: B5BT01 Fumarate reductase, B subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_005511668.1	KEGG: sul:SYO3AOP1_1058 hypothetical protein; SPTR: C4FJ96 Putative curli production assembly/transport component CsgG
YP_005511669.1	COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: hya:HY04AAS1_1359 peptidase U62 modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: A8UV00 TldD protein; PFAM: Putative modulator of DNA gyrase
YP_005511670.1	COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: hya:HY04AAS1_0074 nitrogen-fixing NifU domain protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: A8URH4 NifU-like domain protein; PFAM: NifU-like domain
YP_005511671.1	COGs: COG0806 RimM protein required for 16S rRNA processing; InterPro IPR011961:IPR002676:IPR007903; KEGG: aae:aq_1057 hypothetical protein; PFAM: RimM protein; PRC-barrel domain protein; SPTR: O67156 Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM
YP_005511672.1	COGs: COG4654 Cytochrome c551/c552; InterPro IPR009056:IPR003088:IPR002324; KEGG: dar:Daro_3321 cytochrome c, class I; PFAM: cytochrome c class I; SPTR: P15452 Cytochrome c-552; PFAM: Cytochrome c
YP_005511673.1	KEGG: aae:aq_1029 hypothetical protein; SPTR: A8UVF8 Putative uncharacterized protein
YP_005511674.1	COGs: COG0426 flavoprotein; KEGG: aae:aq_990 hypothetical protein; SPTR: O67114 Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily
YP_005511675.1	COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR019734:IPR011990:IPR001915:IPR013105:IPR 013026; KEGG: aae:aq_972 hypothetical protein; PFAM: peptidase M48 Ste24p; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: O67101 Putative uncharacterized protein; PFAM: Peptidase family M48; Tetratricopeptide repeat
YP_005511676.1	COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: aae:aq_933 hypothetical protein; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: A8US59 Putative uncharacterized protein; PFAM: Protein phosphatase 2C
YP_005511677.1	COGs: COG0467 RecA-superfamily ATPase implicated in signal transduction; InterPro IPR014774:IPR020588:IPR010624; KEGG: aae:aq_204 hypothetical protein; PFAM: Circadian clock protein KaiC central region; SPTR: O66582 Putative uncharacterized protein; PFAM: KaiC
YP_005511678.1	COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: sul:SYO3AOP1_0828 NLP/P60 protein; PFAM: NLP/P60 protein; SPTR: B2V938 NLP/P60 protein; PFAM: NlpC/P60 family
YP_005511679.1	COGs: COG2603 ATPase; InterPro IPR017582:IPR001763:IPR001307; KEGG: dhd:Dhaf_3130 tRNA 2-selenouridine synthase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: A8UTI4 Probable ATP /GTP binding protein; TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase
YP_005511680.1	InterPro IPR014865:IPR002052; KEGG: tbd:Tbd_1843 hypothetical protein; PFAM: Domain of unknown function DUF1791; SPTR: A8UYD2 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_005511681.1	InterPro IPR003716:IPR006110; KEGG: aae:aq_183a RNA polymerase omega subunit; PFAM: RNA polymerase Rpb6; SPTR: A8UUP8 RNA polymerase omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_005511682.1	COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: aae:aq_1796 hypothetical protein; PFAM: Lytic transglycosylase catalytic; SPTR: A8URW7 Putative uncharacterized protein; PFAM: Transglycosylase SLT domain
YP_005511683.1	COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR004639:IPR015421:IPR005814:IPR015424; KEGG: aae:aq_816 glutamate-1-semialdehyde aminotransferase; PFAM: aminotransferase class-III; SPTR: O66998 Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_005511684.1	COGs: COG1993 conserved hypothetical protein; InterPro IPR015867:IPR003793:IPR011322; KEGG: saf:SULAZ_1500 CBS domain containing protein; PFAM: protein of unknown function DUF190; SPTR: A8UV09 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1993
YP_005511685.1	COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: aae:aq_449 hypothetical protein; PFAM: Camphor resistance CrcB protein; SPTR: A8UV08 Protein crcB homolog; TIGRFAM: CrcB protein; PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_005511686.1	COGs: COG1993 conserved hypothetical protein; InterPro IPR015867:IPR003793:IPR011322; KEGG: saf:SULAZ_1500 CBS domain containing protein; PFAM: protein of unknown function DUF190; SPTR: A8UV06 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1993
YP_005511687.1	COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR004392:IPR012202:IPR003495; KEGG: aae:aq_671 hydrogenase expression/formation protein B; PFAM: cobalamin synthesis protein P47K; SPTR: A7BI78 Hydrogenase accessory protein; TIGRFAM: hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB
YP_005511688.1	COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR006137; KEGG: aae:aq_802 hydrogenase small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: A7BI77 Ni,Fe-hydrogenase small subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_005511689.1	COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501:IPR018194; KEGG: aae:aq_804 hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: A7BI76 Ni,Fe-hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase
YP_005511690.1	COGs: COG0309 Hydrogenase maturation factor; InterPro IPR011854:IPR010918:IPR016188:IPR000728; KEGG: aae:aq_1019 hydrogenase expression/formation protein; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; SPTR: A7BI75 Hydrogenase expression/formation protein; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE
YP_005511691.1	COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); InterPro IPR020538:IPR000688; KEGG: aae:aq_1021 hydrogenase accessory protein HypA; PFAM: hydrogenase expression/synthesis HypA; SPTR: A7BI74 Hydrogenase nickel incorporation protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA
YP_005511692.1	COGs: COG0068 Hydrogenase maturation factor; InterPro IPR006070:IPR017945:IPR001792:IPR017968:IPR 004421:IPR011125; KEGG: aae:aq_672 transcriptional regulatory protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; SPTR: A7BI73 Hydrogenase maturation protein; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF
YP_005511693.1	InterPro IPR006894; KEGG: aae:aq_669 hypothetical protein; PFAM: HupH hydrogenase expression protein; SPTR: A7BI72 Putative uncharacterized protein hupH; PFAM: HupH hydrogenase expression protein, C-terminal conserved region
YP_005511694.1	InterPro IPR012336:IPR010893:IPR012335; KEGG: aae:aq_668 hypothetical protein; SPTR: A7BI71 Putative uncharacterized protein hupG; PFAM: Hydrogenase-1 expression protein HyaE
YP_005511695.1	COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671:IPR004419; KEGG: aae:aq_667 HupD hydrogenase related function; PFAM: peptidase M52 hydrogen uptake protein; SPTR: A7BI70 Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease
YP_005511696.1	COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit; InterPro IPR000516:IPR016174:IPR011577; KEGG: aae:aq_665 Ni/Fe hydrogenase B-type cytochrome subunit; PFAM: cytochrome B561; SPTR: A7BI69 Hydrogenase cytochrome b subunit; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit
YP_005511697.1	COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501:IPR018194; KEGG: aae:aq_662 hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: A7BI68 Ni,Fe-hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase
YP_005511698.1	COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR006311:IPR006137:IPR017909; KEGG: aae:aq_660 hydrogenase small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: A7BI67 Ni,Fe-hydrogenase small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); Tat (twin-arginine translocation) pathway signal sequence
YP_005511699.1	COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006424:IPR020828:IPR020829:IPR020830:IPR 020831:IPR020832:IPR016040; KEGG: aae:aq_1065 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: A8UW81 Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_005511700.1	COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119:IPR010992; KEGG: hoh:Hoch_3742 integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: D0LY92 Integration host factor, alpha subunit; PFAM: Bacterial DNA-binding protein
YP_005511701.1	COGs: COG0539 Ribosomal protein S1; InterPro IPR012340:IPR003029:IPR000110:IPR016027; KEGG: aae:aq_1485 ribosomal protein S01; PFAM: RNA binding S1 domain protein; SPTR: A8USK3 Ribosomal protein S01; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_005511702.1	COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: aae:aq_032 hypothetical protein; PFAM: protein of unknown function UPF0027; SPTR: O66450 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027
YP_005511703.1	InterPro IPR015943:IPR017909:IPR011044; KEGG: msl:Msil_3892 hypothetical protein; SPTR: B8EMU4 Putative uncharacterized protein
YP_005511704.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: msl:Msil_3893 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: B8EMU5 Putative uncharacterized protein; PFAM: Predicted permease
YP_005511705.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: tna:CTN_0280 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9KBR0 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_005511706.1	InterPro IPR003838; KEGG: gbm:Gbem_2168 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: B5EDI4 Putative uncharacterized protein; PFAM: Predicted permease
YP_005511707.1	InterPro IPR003838; KEGG: glo:Glov_0545 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: B3E361 Putative uncharacterized protein; PFAM: Predicted permease
YP_005511708.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: ctc:pE88_15 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q899Z9 ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_005511709.1	KEGG: msl:Msil_3895 hypothetical protein; SPTR: B8EMU7 Putative uncharacterized protein
YP_005511710.1	KEGG: sul:SYO3AOP1_1709 hypothetical protein; SPTR: A8UTK8 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2231)
YP_005511711.1	KEGG: mlo:mll1164 auxin-binding protein; SPTR: Q98L62 Auxin-binding protein
YP_005511712.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR004358:IPR005467; KEGG: saf:SULAZ_1673 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1DWZ4 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005511713.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197:IPR 011006:IPR009057; KEGG: pmx:PERMA_1491 transcriptional regulatory protein ZraR; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: C0QRG3 Transcriptional regulatory protein ZraR; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_005511714.1	InterPro IPR000209; KEGG: eat:EAT1b_0321 peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: B5JPP7 Peptidase families S8 and S53 domain protein
YP_005511715.1	COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525:IPR000412; KEGG: bxe:Bxe_B0650 ABC polysaccharide efflux pump, inner membrane subunit; PFAM: ABC-2 type transporter; SPTR: B0P6V4 Putative uncharacterized protein; PFAM: ABC-2 type transporter
YP_005511716.1	COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR006654:IPR001926:IPR006653; KEGG: aae:aq_706 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: O66923 Tryptophan synthase beta chain 1; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_005511717.1	COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; KEGG: aae:aq_1761 hypothetical protein; SPTR: A8UUI8 Putative uncharacterized protein; TIGRFAM: primosomal protein N'
YP_005511718.1	COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: aae:aq_269 hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: A8UW36 Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein
YP_005511719.1	KEGG: hya:HY04AAS1_1290 hypothetical protein; SPTR: A8UW37 Putative uncharacterized protein; TIGRFAM: sulfur relay protein TusB/DsrH
YP_005511720.1	InterPro IPR003787; KEGG: hya:HY04AAS1_1291 hypothetical protein; PFAM: DsrE family protein; SPTR: A8UW38 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_005511721.1	KEGG: hya:HY04AAS1_1292 hypothetical protein; SPTR: A8UW39 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_005511722.1	InterPro IPR001455; KEGG: sul:SYO3AOP1_0950 SirA family protein; PFAM: SirA family protein; SPTR: A8UW40 Putative uncharacterized protein; PFAM: SirA-like protein
YP_005511723.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482; KEGG: aae:aq_1971 type IV pilus assembly protein TapB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: A8UTG3 Type IV pilus assembly protein TapB; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E
YP_005511724.1	COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700:IPR015813; KEGG: aae:aq_1973 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: O67783 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_005511725.1	KEGG: lpn:lpg1355 SidG; SPTR: A8UUX6 Putative uncharacterized protein
YP_005511726.1	COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302:IPR014729:IPR015413:IPR001412:IPR 009008; KEGG: aae:aq_351 leucyl-tRNA synthetase alpha subunit; PFAM: tRNA synthetase class I (M); SPTR: A8UUX7 Leucyl-tRNA synthetase alpha subunit; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_005511727.1	COGs: COG0443 Molecular chaperone; InterPro IPR012725:IPR013126:IPR018181:IPR001023; KEGG: aae:aq_996 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: A8UVT4 Hsp70 chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_005511728.1	COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: aae:aq_1952 hypothetical protein; PFAM: biotin/lipoate A/B protein ligase; SPTR: O67765 Putative uncharacterized protein; PFAM: Bacterial lipoate protein ligase C-terminus; Biotin/lipoate A/B protein ligase family
YP_005511729.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pmx:PERMA_2003 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: C0QSW0 Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1
YP_005511730.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tpd:Teth39_1632 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: C6PM71 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_005511731.1	COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR012902:IPR010054:IPR013545:IPR001120:IPR 000983; KEGG: hor:Hore_18680 type II secretion system protein G; PFAM: type II secretion system protein G; SPTR: Q1Q643 Strongly similar to bacterial general secretion protein G; TIGRFAM: general secretion pathway protein G; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain
YP_005511732.1	COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR002308:IPR014729:IPR015803:IPR015273:IPR 009080; KEGG: aae:aq_1068 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: O67163 Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_005511733.1	COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002306:IPR014729:IPR002305:IPR001412; KEGG: aae:aq_992 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: A8UYG2 Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_005511734.1	InterPro IPR003141:IPR004013:IPR016195; KEGG: aae:aq_993 hypothetical protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: O67116 Putative uncharacterized protein; PFAM: PHP domain
YP_005511735.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: aae:aq_429 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: O66743 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005511736.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: aae:aq_429 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8UYF9 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005511737.1	InterPro IPR002781; KEGG: tpd:Teth39_0912 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: B7R779 Conserved domain protein, putative; PFAM: Sulfite exporter TauE/SafE
YP_005511738.1	COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: tpd:Teth39_0911 nitroreductase; PFAM: nitroreductase; SPTR: B0K8V3 Nitroreductase; PFAM: Nitroreductase family
YP_005511739.1	COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683:IPR013838; KEGG: sul:SYO3AOP1_1545 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B2V670 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005511740.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR018170; KEGG: saf:SULAZ_1263 oxidoreductase, aldo/keto reductase family; PFAM: aldo/keto reductase; SPTR: C1DVU5 Oxidoreductase, aldo/keto reductase family; PFAM: Aldo/keto reductase family
YP_005511741.1	COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR008274:IPR000674:IPR012368; KEGG: saf:SULAZ_1264 aldehyde dehydrogenase; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; SPTR: C1DVU6 Aldehyde dehydrogenase; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase
YP_005511742.1	COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR012675:IPR001041:IPR002888:IPR006058; KEGG: saf:SULAZ_1265 isoquinoline 1-oxidoreductase subunit alpha; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: C1DVU7 Isoquinoline 1-oxidoreductase subunit alpha; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain
YP_005511743.1	COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR013785:IPR001155; KEGG: saf:SULAZ_1266 NADPH dehydrogenase (xenobiotic reductase); PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: C1DVU8 NADPH dehydrogenase (Xenobiotic reductase); PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005511744.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: saf:SULAZ_1267 transcriptional regulator; PFAM: helix-turn-helix HxlR type; SPTR: C1DVU9 Transcriptional regulator; PFAM: HxlR-like helix-turn-helix
YP_005511745.1	COGs: COG1350 alternative tryptophan synthase beta-subunit (paralog of TrpB); InterPro IPR006316:IPR001926:IPR006653; KEGG: aae:aq_1410 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Tryptophan synthase; SPTR: O67409 Tryptophan synthase beta chain 2; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme
YP_005511746.1	KEGG: mei:Msip34_2190 putative transmembrane protein; SPTR: C6X7G7 Putative transmembrane protein
YP_005511747.1	COGs: COG0850 Septum formation inhibitor; InterPro IPR013033:IPR016098:IPR005526; KEGG: aae:aq_878 septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; SPTR: A8UVZ0 Septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC
YP_005511748.1	COGs: COG2894 Septum formation inhibitor-activating ATPase; InterPro IPR010223:IPR002586; KEGG: hya:HY04AAS1_1353 septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: A8UVZ1 Septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD
YP_005511749.1	InterPro IPR005527; KEGG: hya:HY04AAS1_1352 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; SPTR: B4U5J7 Cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE
YP_005511750.1	COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR006357; KEGG: hya:HY04AAS1_0438 HAD-superfamily hydrolase, subfamily IIA; SPTR: A8UV31 Putative uncharacterized protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA
YP_005511751.1	InterPro IPR002509:IPR011330; KEGG: saf:SULAZ_1151 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: C1DVI6 Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase
YP_005511752.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: saf:SULAZ_1153 glucosyl transferase I; PFAM: glycosyl transferase group 1; SPTR: C1DVI7 Glucosyl transferase I; PFAM: Glycosyl transferases group 1
YP_005511753.1	InterPro IPR015391; KEGG: hya:HY04AAS1_0418 SurA domain; PFAM: SurA domain; SPTR: A8URR5 Putative uncharacterized protein; PFAM: SurA N-terminal domain
YP_005511754.1	InterPro IPR000297; KEGG: aae:aq_1695 hypothetical protein; SPTR: O67600 Putative uncharacterized protein
YP_005511755.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016167:IPR016168:IPR006094:IPR004113:IPR 016166:IPR016164; KEGG: aae:aq_1769 D-lactate dehydrogenase; PFAM: FAD linked oxidase domain protein; SPTR: A8UYD8 D-lactate dehydrogenase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_005511756.1	COGs: COG2952 conserved hypothetical protein; InterPro IPR007463; KEGG: aae:aq_1752 hypothetical protein; PFAM: protein of unknown function DUF507; SPTR: A8UUN7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF507)
YP_005511757.1	COGs: COG4123 O-methyltransferase; InterPro IPR007848:IPR002052; KEGG: aae:aq_674 hypothetical protein; PFAM: methyltransferase small; SPTR: A8UUN5 Putative uncharacterized protein; PFAM: Methyltransferase small domain
YP_005511758.1	COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR001469:IPR020546; KEGG: aae:aq_673 ATP synthase F1 epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: A8UUN4 ATP synthase F1 epsilon subunit; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_005511759.1	COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR017714:IPR001303; KEGG: hya:HY04AAS1_1514 methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; SPTR: A8UVQ1 Putative uncharacterized protein; TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: methylthioribulose-1-phosphate dehydratase
YP_005511760.1	COGs: COG0620 Methionine synthase II (cobalamin-independent); InterPro IPR006276:IPR013215:IPR002629:IPR018116; KEGG: aae:aq_1710 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; PRIAM:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase; SPTR: O67606 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TIGRFAM:5-methyltetrahydropteroyltriglutamate/homoc ysteineS-methyltransferase; PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
YP_005511761.1	COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR004358:IPR005467:IPR 009082; KEGG: sul:SYO3AOP1_0746 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8UYW1 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005511762.1	COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR000422:IPR000926:IPR017945:IPR016299; KEGG: aae:aq_350 GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; SPTR: O66679 Riboflavin biosynthesis protein ribBA; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_005511763.1	SPTR: A8UWP0 Putative uncharacterized protein
YP_005511764.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439:IPR017871:IPR 017940:IPR011527; KEGG: aae:aq_1563 ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A8UUQ0 ABC transporter (MsbA subfamily) protein; PFAM: ABC transporter transmembrane region; ABC transporter
YP_005511765.1	COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: aae:aq_1276 hypothetical protein; PFAM: protein of unknown function DUF1009; SPTR: A8UTH3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1009)
YP_005511766.1	COGs: COG0302 GTP cyclohydrolase I; InterPro IPR001474:IPR020602:IPR018234; KEGG: aae:aq_239 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: A8UY02 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_005511767.1	COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002300:IPR013155:IPR009080; KEGG: aae:aq_1770 leucyl-tRNA synthetase beta subunit; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; aminoacyl-tRNA synthetase class Ia; SPTR: O67646 Leucyl-tRNA synthetase subunit beta; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain
YP_005511768.1	InterPro IPR002636; KEGG: sul:SYO3AOP1_1740 protein of unknown function DUF29; PFAM: protein of unknown function DUF29; SPTR: Q9AJL7 Putative uncharacterized protein; PFAM: Domain of unknown function DUF29
YP_005511769.1	COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: hya:HY04AAS1_1438 pentapeptide repeat protein; SPTR: Q9AJL8 Putative uncharacterized protein; PFAM: Pentapeptide repeats (8 copies)
YP_005511770.1	COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766:IPR011896; KEGG: hya:HY04AAS1_1437 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Q9AJL9 2-oxoglutarate ferredoxin oxidoreductase beta subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family
YP_005511771.1	COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752:IPR009014:IPR002880:IPR002869; KEGG: hya:HY04AAS1_1436 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; SPTR: Q9AJM0 2-oxoglutarate ferredoxin oxidoreductase alpha subunit; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase
YP_005511772.1	InterPro IPR003704; KEGG: aae:aq_1166 hypothetical protein; PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; SPTR: Q93RA4 Subunit of 2-oxoglutarate:ferredoxin oxidoredutase; PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
YP_005511773.1	COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR009014:IPR002880:IPR015941; KEGG: hya:HY04AAS1_0042 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: Q93RA3 Subunit of 2-oxoglutarate:ferredoxin oxidoredutase; PFAM: domain; Transketolase, C-terminal domain
YP_005511774.1	COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: aae:aq_1168 ferredoxin oxidoreductase beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Q93RA2 Subunit of 2-oxoglutarate:ferredoxin oxidoredutase; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005511775.1	COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR011894:IPR002869; KEGG: hya:HY04AAS1_0040 pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: Q93RA1 Subunit of 2-oxoglutarate:ferredoxin oxidoredutase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
YP_005511776.1	COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit; InterPro IPR017896:IPR015880; KEGG: hya:HY04AAS1_0039 ferredoxin; SPTR: Q93RA0 Ferredoxin-like protein
YP_005511777.1	KEGG: saf:SULAZ_0646 ForF protein; SPTR: Q93R99 ForF protein
YP_005511778.1	COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495:IPR011629; KEGG: aae:aq_147 cobalamin synthesis related protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SPTR: Q93R98 Putative uncharacterized protein (Fragment); PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain
YP_005511779.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001516:IPR001750:IPR003916; KEGG: aae:aq_866 NADH dehydrogenase I chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: C4FIQ7 NADH dehydrogenase i chain l; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
YP_005511780.1	COGs: COG3002 conserved hypothetical protein; InterPro IPR018752; KEGG: aae:aq_863 hypothetical protein; PFAM: Protein of unknown function DUF2309; SPTR: C4FIQ8 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2309)
YP_005511781.1	COGs: COG1858 Cytochrome c peroxidase; InterPro IPR009056:IPR004852; KEGG: aae:aq_136 cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: C4FLV5 Cytochrome c551 peroxidase; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase
YP_005511782.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: aae:aq_323 hypothetical protein; PFAM: aldo/keto reductase; SPTR: O66660 Putative uncharacterized protein; PFAM: Aldo/keto reductase family
YP_005511783.1	COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR004489:IPR012675:IPR012285:IPR001041:IPR 006058:IPR017900:IPR017896:IPR009051; KEGG: aae:aq_655 fumarate reductase iron-sulfur subunit; PFAM: ferredoxin; PRIAM: Succinate dehydrogenase; SPTR: A8URC5 Fumarate reductase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_005511784.1	COGs: COG1636 conserved hypothetical protein; InterPro IPR003828; KEGG: aae:aq_701 hypothetical protein; PFAM: protein of unknown function DUF208; SPTR: O66919 Putative uncharacterized protein; PFAM: Uncharacterized BCR, COG1636
YP_005511785.1	COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR014777:IPR014776:IPR000878:IPR 003043; KEGG: sul:SYO3AOP1_0051 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Q3LGA4 Uroporphyrinogen III methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_005511786.1	COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: sul:SYO3AOP1_0052 uroporphyrinogen III synthase HEM4; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: B2V6G9 Uroporphyrinogen III synthase HEM4; PFAM: Uroporphyrinogen-III synthase HemD
YP_005511787.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR009010:IPR006963:IPR006656:IPR006657; KEGG: sul:SYO3AOP1_0053 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: B2V6H0 Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_005511788.1	COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701:IPR016196; KEGG: aae:aq_215 nitrate transporter; PFAM: major facilitator superfamily MFS_1; SPTR: O66589 Nitrate transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator)
YP_005511789.1	COGs: COG1513 Cyanate lyase; InterPro IPR008076:IPR003712:IPR010982; KEGG: sto:ST1023 cyanate hydratase; PFAM: Cyanate lyase domain protein; PRIAM: Cyanase; SPTR: Q972W5 Cyanate hydratase; TIGRFAM: cyanate lyase; PFAM: Cyanate lyase C-terminal domain; TIGRFAM: cyanate hydratase
YP_005511790.1	COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR015867:IPR002187:IPR017918:IPR011322; KEGG: aae:aq_213 PII-like protein GlnBi; PFAM: nitrogen regulatory protein P-II; SPTR: A8UQY1 PII-like protein GlnBi; PFAM: Nitrogen regulatory protein P-II
YP_005511791.1	COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR015867:IPR002187:IPR011322; KEGG: aae:aq_213 PII-like protein GlnBi; PFAM: nitrogen regulatory protein P-II; SPTR: O66588 PII-like protein GlnBi; PFAM: Nitrogen regulatory protein P-II
YP_005511792.1	COGs: COG1017 Hemoglobin-like flavoprotein; InterPro IPR012292:IPR000971:IPR009050; KEGG: swi:Swit_5203 nitric oxide dioxygenase; PFAM: globin; SPTR: A5VG98 Nitric oxide dioxygenase; PFAM: Globin
YP_005511793.1	COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027:IPR007419:IPR005117:IPR006067:IPR 006066; KEGG: aae:aq_206 nitrite reductase (NAD(P)H) large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; SPTR: O66583 Nitrite reductase (NAD(P)H) large subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit
YP_005511794.1	KEGG: min:Minf_1731 hypothetical protein; SPTR: B3DX76 Putative uncharacterized protein
YP_005511795.1	InterPro IPR006121; KEGG: psa:PST_3433 periplasmic transport protein; MerP; SPTR: A8UT35 Putative uncharacterized protein; PFAM: Heavy-metal-associated domain
YP_005511796.1	COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR015867:IPR002187:IPR017918:IPR011322; KEGG: tye:THEYE_A1712 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: B5YH13 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II
YP_005511797.1	COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR015867:IPR002187:IPR017918:IPR011322; KEGG: tye:THEYE_A1711 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: C6HVD5 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II
YP_005511798.1	InterPro IPR009727; KEGG: mag:amb1581 protein FixU-like protein; PFAM: NifT/FixU family protein; SPTR: Q2W6Z0 Protein fixU homolog; TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU protein; TIGRFAM: probable nitrogen fixation protein FixT
YP_005511799.1	InterPro IPR001450:IPR017900:IPR017896; KEGG: hya:HY04AAS1_0945 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B4U921 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain
YP_005511800.1	InterPro IPR004893; KEGG: hya:HY04AAS1_0946 nitrogen fixation protein NifW; PFAM: nitrogen fixation protein NifW; SPTR: B4U922 Nitrogen fixation protein NifW; PFAM: Nitrogen fixation protein NifW
YP_005511801.1	InterPro IPR007415; KEGG: hya:HY04AAS1_0947 NifZ family protein; PFAM: NifZ family protein; SPTR: B4U923 NifZ family protein; PFAM: NifZ domain
YP_005511802.1	KEGG: hya:HY04AAS1_0948 hypothetical protein; SPTR: B4U924 Putative uncharacterized protein; PFAM: TOBE domain
YP_005511803.1	InterPro IPR001080; KEGG: tsi:TSIB_0129 ferredoxin; SPTR: B5ISH0 4Fe-4S binding domain protein; PFAM: Protein of unknown function (DUF1271)
YP_005511804.1	InterPro IPR014283:IPR001450:IPR017900:IPR017896; KEGG: mca:MCA0238 ferredoxin, 4Fe-4S; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A7L4W4 FdxA; TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S binding domain; TIGRFAM: ferredoxin III, nif-specific
YP_005511805.1	InterPro IPR007774; KEGG: rpc:RPC_4456 hypothetical protein; PFAM: protein of unknown function DUF683; SPTR: A4U5P8 Protein containing DUF683; PFAM: Protein of unknown function (DUF683)
YP_005511806.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR013785:IPR000891:IPR002034; KEGG: gbm:Gbem_2073 trans-homoaconitate synthase; PFAM: pyruvate carboxyltransferase; SPTR: B5ECQ1 Homocitrate synthase; PFAM: HMGL-like
YP_005511807.1	COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR015421:IPR000192:IPR015424; KEGG: aae:aq_739 FeS cluster formation protein NifS; PFAM: aminotransferase class V; SPTR: O66947 FeS cluster formation protein NifS; PFAM: Aminotransferase class-V
YP_005511808.1	COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR013984:IPR001203; KEGG: ton:TON_1354 aor-2 tungsten-containing aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; SPTR: C8SAN4 Aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3
YP_005511809.1	InterPro IPR003749; KEGG: tga:TGAM_1912 molybdopterin synthase, small subunit, MoaD-like protein (MoaD); PFAM: thiamineS protein; SPTR: C5A1Z5 Molybdopterin synthase, small subunit, moaD-like protein (MoaD); PFAM: ThiS family
YP_005511810.1	COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR003018:IPR003593:IPR002078:IPR002197:IPR 020441:IPR009057; KEGG: aae:aq_1792 NtrC family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; GAF domain protein; SPTR: O67661 Transcriptional regulator (NtrC family); PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein
YP_005511811.1	COGs: COG1348 Nitrogenase subunit NifH (ATPase); InterPro IPR005977:IPR000392; KEGG: ava:Ava_4247 nitrogenase iron protein subunit NifH; PFAM: NifH/frxC-family protein; PRIAM: Nitrogenase; SPTR: Q44484 Nitrogenase iron protein 2; TIGRFAM: nitrogenase iron protein; PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein
YP_005511812.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR014710:IPR000595:IPR018490; KEGG: aae:aq_490 Crp family transcriptional regulator; PFAM: cyclic nucleotide-binding; SPTR: O66781 Transcriptional regulator (Crp/Fnr family); PFAM: Cyclic nucleotide-binding domain
YP_005511813.1	InterPro IPR004952; KEGG: afr:AFE_1514 hypothetical protein; PFAM: protein of unknown function DUF269; SPTR: B7JA91 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF269; TIGRFAM: probable nitrogen fixation protein
YP_005511814.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015421:IPR000653:IPR015424; KEGG: xau:Xaut_0120 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A7IBI6 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_005511815.1	COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR005973:IPR000510:IPR000318; KEGG: min:Minf_1872 nitrogenase molybdenum-cofactor synthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; SPTR: B3DXX4 Nitrogenase molybdenum-cofactor synthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE
YP_005511816.1	COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR005975:IPR000510:IPR000318; KEGG: bja:blr1746 nitrogenase molybdenum-cofactor synthesis protein; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: P26507 Nitrogenase iron-molybdenum cofactor biosynthesis protein nifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN
YP_005511817.1	InterPro IPR013480:IPR003731; KEGG: rpc:RPC_4458 dinitrogenase iron-molybdenum cofactor biosynthesis; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Q20Y05 Dinitrogenase iron-molybdenum cofactor biosynthesis; TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX
YP_005511818.1	KEGG: bmj:BMULJ_00707 hypothetical protein; SPTR: C4TXD5 Putative uncharacterized protein
YP_005511819.1	InterPro IPR008972; KEGG: geo:Geob_2353 hypothetical protein; SPTR: B9LZF4 Putative uncharacterized protein
YP_005511820.1	KEGG: component of the spliceosome complex, putative
YP_005511821.1	KEGG: saf:SULAZ_1558 hypothetical protein; SPTR: C1DWN6 Putative uncharacterized protein
YP_005511822.1	SPTR: A8UX01 Putative uncharacterized protein
YP_005511823.1	COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750:IPR003916; KEGG: sul:SYO3AOP1_0700 NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: B2V8R3 NADH dehydrogenase (Quinone); PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_005511824.1	InterPro IPR002355; KEGG: sul:SYO3AOP1_0701 hydrogenase 4 membrane component (E); SPTR: B2V8R4 Hydrogenase 4 membrane component (E)
YP_005511825.1	COGs: COG0650 Formate hydrogenlyase subunit 4; KEGG: sul:SYO3AOP1_0702 respiratory-chain NADH dehydrogenase subunit 1; SPTR: B2V8R5 Respiratory-chain NADH dehydrogenase subunit 1; PFAM: NADH dehydrogenase
YP_005511826.1	COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750:IPR003918; KEGG: sul:SYO3AOP1_0703 NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: B2V8R6 NADH dehydrogenase (Quinone); PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_005511827.1	COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR001268:IPR001135:IPR020396; KEGG: sul:SYO3AOP1_0699 NADH dehydrogenase (ubiquinone) 30 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH-ubiquinone oxidoreductase chain 49kDa; SPTR: B2V8R2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit
YP_005511828.1	COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137; KEGG: sul:SYO3AOP1_0698 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: A8V3B9 Putative uncharacterized protein; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_005511829.1	COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: aae:aq_162 folate biosynthesis 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase; SPTR: O66550 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_005511830.1	COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR015421:IPR000192:IPR016454:IPR015424; KEGG: aae:aq_739 FeS cluster formation protein NifS; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: A8UXT7 FeS cluster formation protein NifS; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS
YP_005511831.1	COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591:IPR000808; KEGG: aae:aq_737 hypothetical protein; PFAM: ATPase-like, ParA/MinD; SPTR: A8UXT6 Putative uncharacterized protein; PFAM: ParA/MinD ATPase like; Anion-transporting ATPase
YP_005511832.1	COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; KEGG: pmx:PERMA_1505 twitching mobility protein; SPTR: A8UXT2 Twitching mobility protein
YP_005511833.1	COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183:IPR002433:IPR009006; KEGG: aae:aq_728 ornithine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: A8UXT1 Ornithine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain
YP_005511834.1	COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR004479:IPR018317; KEGG: aae:aq_831 trans-regulatory protein ExsB; PFAM: Queuosine synthesis-like; SPTR: O67003 Queuosine biosynthesis protein queC; TIGRFAM: exsB protein; PFAM: ExsB; TIGRFAM: exsB protein
YP_005511835.1	COGs: COG1978 conserved hypothetical protein; InterPro IPR007405; KEGG: aae:aq_114 hypothetical protein; PFAM: protein of unknown function DUF458; SPTR: A8UUC9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF458)
YP_005511836.1	KEGG: hya:HY04AAS1_1058 hypothetical protein; SPTR: A8UUC8 Putative uncharacterized protein
YP_005511837.1	COGs: COG1514 2'-5' RNA ligase; InterPro IPR004175:IPR014051:IPR009097; KEGG: aae:aq_768 hypothetical protein; PFAM: Phosphoesterase HXTX; SPTR: A8UTL9 Putative uncharacterized protein; TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase
YP_005511838.1	COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR004733:IPR000728:IPR010918:IPR016188; KEGG: aae:aq_769 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: A8UTM0 Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_005511839.1	COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184:IPR018184; KEGG: aae:aq_1300 outer membrane protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; SPTR: A8UVR2 Outer membrane protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein
YP_005511840.1	COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: saf:SULAZ_0039 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; SPTR: C1DXC5 Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_005511841.1	COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: aae:aq_527 molybdenum cofactor biosynthesis MoaC; PFAM: molybdopterin cofactor biosynthesis MoaC region; SPTR: O66810 Molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_005511842.1	COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488:IPR010994; KEGG: aae:aq_1191 hypothetical protein; PFAM: SMF family protein; SPTR: A8URR9 Putative uncharacterized protein; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_005511843.1	InterPro IPR000182:IPR016181; KEGG: mca:MCA2548 hypothetical protein; SPTR: Q604J1 Putative uncharacterized protein
YP_005511844.1	COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076:IPR003004; KEGG: dat:HRM2_30250 GspF2; PFAM: Type II secretion system F domain; SPTR: C0QK82 GspF2; PFAM: Bacterial type II secretion system protein F domain
YP_005511845.1	COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR006638:IPR007197:IPR016431; KEGG: saf:SULAZ_1650 [pyruvate formate-lyase]-activating enzyme; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1DWX1 [pyruvate formate-lyase]-activating enzyme; PFAM: Radical SAM superfamily
YP_005511846.1	COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: saf:SULAZ_1253 Na+:H+ antiporter, NhaA family; PFAM: sodium/hydrogen exchanger; SPTR: C1DVT6 Na+:H+ antiporter, NhaA family; PFAM: Sodium/hydrogen exchanger family
YP_005511847.1	InterPro IPR014710:IPR013096:IPR011051; KEGG: sul:SYO3AOP1_0812 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: B2V922 Cupin 2 conserved barrel domain protein; PFAM: Cupin domain
YP_005511848.1	COGs: COG0756 dUTPase; InterPro IPR008181:IPR008180; KEGG: aae:aq_220 deoxyuridine 5'triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase; PRIAM: dUTP diphosphatase; SPTR: O66592 Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_005511849.1	COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterPro IPR012162:IPR004087:IPR015848:IPR012340:IPR 001247:IPR015847:IPR018111:IPR003029:IPR004088:IPR020568; KEGG: aae:aq_221 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: A8UXR1 Polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase
YP_005511850.1	COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR005290:IPR009068:IPR000589; KEGG: aae:aq_226a ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: O66594 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_005511851.1	KEGG: hya:HY04AAS1_0677 dephospho-CoA kinase; SPTR: A8UTH2 Putative uncharacterized protein
YP_005511852.1	COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: aae:aq_635 hypothetical protein; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: O66881 Putative uncharacterized protein; manually curated; PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005511853.1	COGs: COG0583 Transcriptional regulator; InterPro IPR011991:IPR000847:IPR005119; KEGG: aae:aq_638 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: A8UQS1 Transcriptional regulator (LysR family) protein; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005511854.1	COGs: COG0546 phosphatase; InterPro IPR006439:IPR005834; KEGG: pmx:PERMA_0094 histidinol-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8UQS3 HAD superfamily (Subfamily IA) hydrolase, TIGR01548; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005511855.1	COGs: COG2835 conserved hypothetical protein; InterPro IPR005651; KEGG: hya:HY04AAS1_0488 protein of unknown function DUF343; PFAM: protein of unknown function DUF343; SPTR: B4U7R4 Putative uncharacterized protein; PFAM: Trm112p-like protein
YP_005511856.1	KEGG: aae:aq_919 hypothetical protein; SPTR: O67064 Uncharacterized protein aq_919
YP_005511857.1	COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR013483:IPR006638:IPR013785:IPR007197:IPR 010505:IPR000385; KEGG: reh:H16_A2581 molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8URQ9 Molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_005511858.1	COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: aae:aq_2181 molybdopterin converting factor subunit 2; PFAM: molybdopterin biosynthesis MoaE protein; SPTR: A8URR0 Molybdopterin converting factor subunit 2; PFAM: MoaE protein
YP_005511859.1	SPTR: A8UTR5 Putative uncharacterized protein
YP_005511860.1	SPTR: A8UUS3 Putative uncharacterized protein
YP_005511861.1	InterPro IPR002035; KEGG: aae:aq_345 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: A8UT41 Putative uncharacterized protein; PFAM: von Willebrand factor type A domain
YP_005511862.1	COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: aae:aq_2137 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8USB0 ABC transporter; PFAM: ABC transporter
YP_005511863.1	InterPro IPR011576:IPR009002; KEGG: hya:HY04AAS1_1632 pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: A8UUI7 Putative uncharacterized protein; PFAM: Pyridoxamine 5'-phosphate oxidase
YP_005511864.1	KEGG: hin:HI0465 D-3-phosphoglycerate dehydrogenase; SPTR: C4G229 Putative uncharacterized protein
YP_005511865.1	COGs: COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferase; InterPro IPR013216; KEGG: aae:aq_311 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: O66653 Putative uncharacterized protein; PFAM: tRNA methyltransferase complex GCD14 subunit
YP_005511866.1	COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; InterPro IPR003682; KEGG: aae:aq_1582 glucose inhibited division protein B; PFAM: glucose inhibited division protein; SPTR: A8UVI0 Glucose inhibited division protein B; TIGRFAM: methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB
YP_005511867.1	COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR012335:IPR003782:IPR017936:IPR012336; KEGG: aae:aq_988 hypothetical protein; PFAM: electron transport protein SCO1/SenC; SPTR: A8UUH6 Putative uncharacterized protein; PFAM: SCO1/SenC
YP_005511868.1	COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); InterPro IPR004413:IPR006075:IPR006107:IPR018027:IPR 017958:IPR003789; KEGG: aae:aq_461 aspartyl/glutamyl-tRNA amidotransferase subunit B; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase; SPTR: O66766 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit
YP_005511869.1	COGs: COG0682 Prolipoprotein diacylglyceryltransferase; InterPro IPR001640; KEGG: aae:aq_270 prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; SPTR: O66627 Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_005511870.1	KEGG: hhe:HH0893 ferric uptake regulation protein; SPTR: A8URK3 Putative uncharacterized protein
YP_005511871.1	COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR005761:IPR013221:IPR004101:IPR000713; KEGG: aae:aq_1747 UDP-MurNac-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: A8URK2 UDP-MurNac-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases
YP_005511872.1	COGs: COG1465 alternative 3-dehydroquinate synthase; InterPro IPR002812; KEGG: aae:aq_1922 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; SPTR: O67751 3-dehydroquinate synthase homolog; PFAM: 3-dehydroquinate synthase
YP_005511873.1	COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR002292:IPR006132:IPR006131:IPR006130; KEGG: aae:aq_1711 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; SPTR: A8UV16 Ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_005511874.1	InterPro IPR005106:IPR016040; KEGG: wsu:WS1377 hypothetical protein; PFAM: homoserine dehydrogenase NAD-binding; SPTR: B9ZPK5 Homoserine dehydrogenase, NAD-binding; PFAM: Homoserine dehydrogenase, NAD binding domain
YP_005511875.1	COGs: COG0456 Acetyltransferase; InterPro IPR006464:IPR016181:IPR000182; KEGG: aae:aq_567 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: O66838 Ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; manually curated; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase
YP_005511876.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR008949:IPR000092; KEGG: aae:aq_748 geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; SPTR: O66952 Geranyltranstransferase; PFAM: Polyprenyl synthetase
YP_005511877.1	KEGG: mpd:MCP_1829 hypothetical protein; SPTR: A8USV3 Putative uncharacterized protein
YP_005511878.1	COGs: COG0322 Nuclease subunit of the excinuclease complex; InterPro IPR004791:IPR000305:IPR001943:IPR001162:IPR 010994:IPR009055; KEGG: aae:aq_2126 repair excision nuclease subunit C; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: O67887 UvrABC system protein C; TIGRFAM: excinuclease ABC, C subunit; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit
YP_005511879.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR008949:IPR000092; KEGG: aae:aq_895 octoprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; SPTR: O67044 Octoprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase
YP_005511880.1	InterPro IPR008258; KEGG: ppd:Ppro_0193 lytic transglycosylase, catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: A8V1U0 Transglycosylase SLT domain protein (Fragment); PFAM: Transglycosylase SLT domain
YP_005511881.1	InterPro IPR000209:IPR002114; KEGG: cts:Ctha_0236 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: B3QTG1 Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family
YP_005511882.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR004099:IPR013027:IPR012999:IPR 000815:IPR016156; KEGG: aae:aq_736 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: O66945 Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_005511883.1	KEGG: hya:HY04AAS1_0329 hypothetical protein; SPTR: B4U7A8 Putative uncharacterized protein
YP_005511884.1	KEGG: ate:Athe_1928 transposase; SPTR: B9ML08 Transposase; TIGRFAM: transposase, putative, N-terminal domain
YP_005511885.1	COGs: COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C; InterPro IPR011845:IPR016084:IPR004305; KEGG: esa:ESA_02994 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 domain protein; PRIAM: Pyrroloquinoline-quinone synthase; SPTR: A7MN58 Pyrroloquinoline-quinone synthase; TIGRFAM: coenzyme PQQ biosynthesis protein C; PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C
YP_005511886.1	COGs: COG0535 Fe-S oxidoreductase; InterPro IPR011843:IPR006638:IPR013785:IPR007197:IPR 017200; KEGG: mei:Msip34_1525 coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C6XDZ5 Coenzyme PQQ biosynthesis protein E; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis protein E
YP_005511887.1	COGs: COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C; InterPro IPR011845:IPR016084:IPR004305; KEGG: min:Minf_1235 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 domain protein; PRIAM: Pyrroloquinoline-quinone synthase; SPTR: B4CZR1 Coenzyme PQQ biosynthesis protein C; TIGRFAM: coenzyme PQQ biosynthesis protein C; PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C
YP_005511888.1	COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: vap:Vapar_6247 coenzyme PQQ biosynthesis protein B; SPTR: B4CZR2 Coenzyme PQQ biosynthesis protein B; PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: coenzyme PQQ biosynthesis protein B
YP_005511889.1	InterPro IPR011701:IPR016196; KEGG: ttr:Tter_1284 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: D1CBM7 Major facilitator superfamily MFS_1; PFAM: Bacterial protein of unknown function (DUF894)
YP_005511890.1	InterPro IPR008792; KEGG: msl:Msil_1150 coenzyme PQQ synthesis D; PFAM: coenzyme PQQ synthesis D; SPTR: B8ENI8 Coenzyme PQQ synthesis D; PFAM: Coenzyme PQQ synthesis protein D (PqqD)
YP_005511891.1	InterPro IPR001706:IPR018265; KEGG: aae:aq_792a ribosomal protein L35; PFAM: ribosomal protein L35; SPTR: A8UUM0 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_005511892.1	KEGG: aae:aq_252 hypothetical protein; SPTR: A8UVX8 Putative uncharacterized protein
YP_005511893.1	COGs: COG3439 conserved hypothetical protein; InterPro IPR005180:IPR016796; KEGG: aae:aq_598 hypothetical protein; PFAM: protein of unknown function DUF302; SPTR: A8UVX9 Putative uncharacterized protein; PFAM: Domain of unknown function DUF302
YP_005511894.1	KEGG: hya:HY04AAS1_0897 hypothetical protein; SPTR: A8UYH7 Fructose-6-phosphate aldolase 2; PFAM: Protein of unknown function (DUF3501)
YP_005511895.1	COGs: COG1592 Rubrerythrin; InterPro IPR012347:IPR003251:IPR009040:IPR009078; KEGG: hya:HY04AAS1_0899 rubrerythrin; PFAM: Rubrerythrin; SPTR: B4U8X5 Rubrerythrin; PFAM: Rubrerythrin
YP_005511896.1	KEGG: aae:aq_aa40 hypothetical protein; SPTR: O70075 Uncharacterized protein aq_1391/aq_1640/aq_aa40
YP_005511897.1	InterPro IPR004096; KEGG: hya:HY04AAS1_0523 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: A8UVQ3 Putative uncharacterized protein; PFAM: V4R domain
YP_005511898.1	KEGG: cpb:Cphamn1_2363 hypothetical protein; SPTR: C4FJR6 Putative uncharacterized protein
YP_005511899.1	COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR017938:IPR008333:IPR017927:IPR001709:IPR 001221:IPR001433; KEGG: afo:Afer_0935 oxidoreductase FAD-binding domain protein; PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; SPTR: B9ZYL6 Ferredoxin-NADP+ reductase; PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005511900.1	COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: aae:aq_894 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: O67043 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_005511901.1	COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR006675:IPR002646:IPR006674; KEGG: aae:aq_2158 poly A polymerase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SPTR: O67911 Poly A polymerase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG
YP_005511902.1	InterPro IPR016047:IPR011055; KEGG: hya:HY04AAS1_0164 peptidase M23; PFAM: Peptidase M23; SPTR: A8UT23 Lipoprotein; PFAM: Peptidase family M23
YP_005511903.1	COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631:IPR017953; KEGG: aae:aq_1365 hypothetical protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; SPTR: O67377 Putative uncharacterized protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region
YP_005511904.1	COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR013785:IPR002220:IPR005263:IPR020624:IPR 020625; KEGG: aae:aq_1143 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: A8UTD8 Dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_005511905.1	KEGG: aae:aq_125 hypothetical protein; SPTR: O66525 Uncharacterized protein aq_125
YP_005511906.1	COGs: COG4570 Holliday junction resolvase; InterPro IPR016281:IPR008822; KEGG: aae:aq_1953 hypothetical protein; PFAM: endodeoxyribonuclease RusA; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: A8UWI3 Putative uncharacterized protein; PFAM: Endodeoxyribonuclease RusA
YP_005511907.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR011055:IPR002482:IPR018392:IPR016047; KEGG: sul:SYO3AOP1_1448 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: B2V5V6 Peptidase M23; PFAM: Peptidase family M23; LysM domain
YP_005511908.1	COGs: COG1254 Acylphosphatase; InterPro IPR001792:IPR017968; KEGG: tpe:Tpen_1052 acylphosphatase; PFAM: acylphosphatase; SPTR: A8UQS7 Acylphosphatase; PFAM: Acylphosphatase
YP_005511909.1	KEGG: aae:aq_914 hypothetical protein; SPTR: O67059 Uncharacterized protein aq_914
YP_005511910.1	COGs: COG0761 Penicillin tolerance protein; InterPro IPR003451; KEGG: aae:aq_1739 LytB protein; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: A8URF9 LytB protein; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
YP_005511911.1	COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR005244:IPR006638:IPR013785:IPR007197:IPR 020050; KEGG: aae:aq_648 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: O66888 Putative uncharacterized protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily
YP_005511912.1	InterPro IPR000883; KEGG: tgr:Tgr7_3135 hypothetical protein; SPTR: B8GQI0 Putative uncharacterized protein; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_005511913.1	InterPro IPR011051:IPR014710:IPR013096; KEGG: aae:aq_943 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: O67079 Putative uncharacterized protein; PFAM: Cupin domain
YP_005511914.1	InterPro IPR007500; KEGG: cac:CAC0071 hypothetical protein; PFAM: protein of unknown function DUF542 ScdA domain protein; SPTR: C2L0Z3 Possible cell division and morphogenesis protein ScdA; PFAM: Domain of Unknown function (DUF542)
YP_005511915.1	COGs: COG2210 conserved hypothetical protein; KEGG: tbd:Tbd_1983 hypothetical protein; SPTR: A8URF6 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_005511916.1	COGs: COG1309 Transcriptional regulator; InterPro IPR009057:IPR012287:IPR001647; KEGG: chy:CHY_2030 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A8URF7 Possible Transcriptional Regulator, TetR family protein; PFAM: Bacterial regulatory proteins, tetR family
YP_005511917.1	COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: saf:SULAZ_0864 crispr-associated protein Cas2; PFAM: protein of unknown function DUF196; SPTR: A8UUT9 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2
YP_005511918.1	COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729:IPR019858; KEGG: tpd:Teth39_0134 CRISPR-associated Cas1 family protein; PFAM: protein of unknown function DUF48; SPTR: A8UUT6 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1, HMARI/TNEAP subtype; CRISPR-associated protein Cas1
YP_005511919.1	COGs: COG1468 RecB family exonuclease; InterPro IPR013343; KEGG: cth:Cthe_2298 CRISPR-associated Cas4 family protein; PFAM: CRISPR-associated protein Cas4; SPTR: A8UUT5 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas4; PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4
YP_005511920.1	COGs: COG1203 helicase; InterPro IPR014001:IPR001650:IPR006483:IPR006474:IPR 014021; KEGG: tpd:Teth39_0125 CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: A8UUT3 Predicted helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein
YP_005511921.1	InterPro IPR007552:IPR013421:IPR013422; KEGG: saf:SULAZ_0869 crispr-associated protein Cas5, hmari subtype; PFAM: protein of unknown function DUF522; SPTR: A8UUT1 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas5, Hmari subtype; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, Hmari subtype; CRISPR-associated protein Cas5, N-terminal domain
YP_005511922.1	COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR006482:IPR013419; KEGG: dtu:Dtur_0623 CRISPR-associated protein, Csh2 family; PFAM: CRISPR-associated protein TM1801; SPTR: A8UUS8 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein, Csh2 family; CRISPR-associated protein, CT1132 family; PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csh2 family
YP_005511923.1	InterPro IPR013389:IPR013420; KEGG: dtu:Dtur_0624 CRISPR-associated protein, TM1802 family; PFAM: CRISPR-associated protein TM1802; SPTR: A8UUS7 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein, TM1802 family; CRISPR-associated protein, Csh1 family; manually curated; PFAM: CRISPR-associated protein TM1802 (cas_TM1802); TIGRFAM: CRISPR-associated protein, TM1802 family; CRISPR-associated protein, Csh1 family
YP_005511924.1	COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR002743:IPR010156; KEGG: dtu:Dtur_0625 CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; SPTR: A8UUS5 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas6; PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6
YP_005511925.1	COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR016185:IPR005480:IPR013817:IPR013816:IPR 005481:IPR005479:IPR005483:IPR011761; KEGG: aae:aq_2101 carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; SPTR: O67869 Carbamoyl-phosphate synthase large chain, N-terminal section; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_005511926.1	COGs: COG0442 Prolyl-tRNA synthetase; InterPro IPR007214:IPR004154:IPR002314:IPR002316:IPR 004500:IPR006195; KEGG: aae:aq_365 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; SPTR: A8UQR1 Prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II
YP_005511927.1	COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: aae:aq_557 dethiobiotin synthetase; PRIAM: Dethiobiotin synthase; SPTR: O66832 Dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase
YP_005511928.1	COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR012338:IPR005311:IPR001460; KEGG: hya:HY04AAS1_0853 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: A8UTV1 Penicillin binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_005511929.1	COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR002474:IPR000991:IPR001317:IPR011702:IPR 006220:IPR006274:IPR017926; KEGG: aae:aq_410 carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; SPTR: O66727 Carbamoyl-phosphate synthase small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_005511930.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994:IPR000587:IPR001714:IPR001131; KEGG: aae:aq_1535 Xaa-Pro dipeptidase; PFAM: peptidase M24; creatinase; SPTR: O67493 Xaa-pro dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005511931.1	COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR007046:IPR007634:IPR000394:IPR000843; KEGG: aae:aq_599 RNA polymerase sigma factor RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; SPTR: A8UUG6 RNA polymerase sigma factor RpoN; PFAM: Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor
YP_005511932.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550:IPR005170; KEGG: aae:aq_2120 hemolysin homolog protein; PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; SPTR: A8UT88 Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_005511933.1	COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593:IPR003439:IPR013563:IPR017871; KEGG: aae:aq_2122 ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: O67885 ABC transporter; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005511934.1	COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR007197:IPR010723:IPR004558; KEGG: aae:aq_2124 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8UT90 Coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase
YP_005511935.1	COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR009012:IPR013805:IPR000740; KEGG: aae:aq_433 heat shock protein GrpE; PFAM: GrpE protein; SPTR: A8USD9 Protein grpE; PFAM: GrpE
YP_005511936.1	COGs: COG1432 conserved hypothetical protein; InterPro IPR002790; KEGG: aae:aq_430 hypothetical protein; PFAM: protein of unknown function DUF88; SPTR: O66744 Putative uncharacterized protein; PFAM: Protein of unknown function DUF88
YP_005511937.1	COGs: COG1893 Ketopantoate reductase; InterPro IPR008927:IPR016040:IPR013328:IPR013332:IPR 013752:IPR003710; KEGG: aae:aq_1727 hypothetical protein; PFAM: Ketopantoate reductase ApbA/PanE domain protein; PRIAM: 2-dehydropantoate 2-reductase; SPTR: O67619 Putative 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_005511938.1	COGs: COG1796 DNA polymerase IV (family X); InterPro IPR016195:IPR010996:IPR002054:IPR003583:IPR 003141:IPR004013:IPR002008; KEGG: aae:aq_1422 DNA polymerase beta family protein; PFAM: PHP domain protein; SMART: DNA polymerase X; Helix-hairpin-helix DNA-binding class 1; phosphoesterase PHP domain protein; SPTR: A8UUB1 DNA polymerase beta family protein; PFAM: PHP domain
YP_005511939.1	COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: aae:aq_263 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; PRIAM: Hydroxymethylbilane synthase; SPTR: A8UUB7 Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_005511940.1	COGs: COG0433 ATPase; KEGG: aae:aq_1682 hypothetical protein; SPTR: O67593 Putative uncharacterized protein
YP_005511941.1	COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: aae:aq_1681 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: A8UUB9 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase
YP_005511942.1	COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: aae:aq_2035 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: A8UQS0 Putative uncharacterized protein; PFAM: Radical SAM superfamily
YP_005511943.1	COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterPro IPR009000:IPR009061:IPR006847:IPR000795:IPR 004161:IPR001806:IPR000178:IPR005225; KEGG: aae:aq_2032 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; SPTR: A8UQR9 Translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_005511944.1	COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: aae:aq_264 hypothetical protein; PFAM: biotin/lipoate A/B protein ligase; SPTR: O66622 Putative uncharacterized protein; PFAM: Biotin/lipoate A/B protein ligase family
YP_005511945.1	COGs: COG0502 Biotin synthase; InterPro IPR006638:IPR013785:IPR007197:IPR010722:IPR 002684; KEGG: aae:aq_975 biotin synthetase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8UVP6 Biotin synthetase; TIGRFAM: biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase
YP_005511946.1	COGs: COG3022 conserved hypothetical protein; KEGG: aae:aq_644 hypothetical protein; SPTR: O66885 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF328)
YP_005511947.1	COGs: COG0313 methyltransferase; InterPro IPR000878:IPR014777:IPR008189; KEGG: aae:aq_1111 hypothetical protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: O67195 Putative uncharacterized protein; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: conserved hypothetical protein TIGR00096
YP_005511948.1	COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR014729:IPR006016:IPR006015; KEGG: aae:aq_1024 hypothetical protein; PFAM: UspA domain protein; SPTR: A8UW74 Putative uncharacterized protein; PFAM: Universal stress protein family
YP_005511949.1	COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR013760:IPR003594:IPR020568:IPR001241:IPR 013759:IPR013506:IPR006171:IPR002288:IPR000565:IPR011557:I PR002173; KEGG: aae:aq_1026 gyrase B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: A8UW73 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit
YP_005511950.1	COGs: COG1568 methyltransferase; InterPro IPR014435:IPR002723; KEGG: aae:aq_1754 hypothetical protein; PFAM: protein of unknown function DUF43; SPTR: A8UUP0 Putative uncharacterized protein; PFAM: Protein of unknown function DUF43
YP_005511951.1	COGs: COG0492 Thioredoxin reductase; InterPro IPR006076:IPR000103; KEGG: aae:aq_407 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: A8UQZ6 Putative uncharacterized protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005511952.1	KEGG: aae:aq_1287 hypothetical protein; SPTR: O67319 Uncharacterized protein aq_1287
YP_005511953.1	COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR005644:IPR004846:IPR001775:IPR013356; KEGG: aae:aq_1288 general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: A8UQX4 General secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D
YP_005511954.1	COGs: COG3031 Type II secretory pathway component PulC; InterPro IPR001478:IPR001639; KEGG: aae:aq_1473 hypothetical protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: A8US73 Putative uncharacterized protein; TIGRFAM: general secretion pathway protein C; PFAM: PDZ domain (Also known as DHR or GLGF); TIGRFAM: general secretion pathway protein C
YP_005511955.1	COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; InterPro IPR001353; KEGG: aae:aq_1671 ATP-dependent protease peptidase subunit; PFAM: 20S proteasome A and B subunits; SPTR: A8URN7 ATP-dependent protease peptidase subunit; PFAM: Proteasome subunit
YP_005511956.1	COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: aae:aq_1223 hypothetical protein; PFAM: protein of unknown function DUF164; SPTR: A8UW72 Putative uncharacterized protein; PFAM: Putative zinc ribbon domain
YP_005511957.1	COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182:IPR011923; KEGG: aae:aq_025 rod shape determining protein RodA; PFAM: cell cycle protein; SPTR: A8UVL0 Rod shape determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA
YP_005511958.1	COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR007197:IPR010723:IPR004559; KEGG: aae:aq_1424 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: O67418 Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase
YP_005511959.1	COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: pmx:PERMA_0896 L-fuculose phosphate aldolase; PFAM: class II aldolase/adducin family protein; SPTR: A8UT60 Glycine cleavage system protein H; PFAM: Class II Aldolase and Adducin N-terminal domain
YP_005511960.1	COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR011053:IPR002930:IPR003016; KEGG: aae:aq_1657 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: A8UT59 Glycine cleavage system protein H; PFAM: Glycine cleavage H-protein
YP_005511961.1	COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR015424:IPR018319:IPR004534; KEGG: aae:aq_1031 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase; PRIAM: L-seryl-tRNA(Sec) selenium transferase; SPTR: O67140 L-seryl-tRNA(Sec) selenium transferase; TIGRFAM: L-seryl-tRNA selenium transferase; PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase
YP_005511962.1	COGs: COG3276 Selenocysteine-specific translation elongation factor; InterPro IPR009000:IPR011991:IPR000795:IPR004161:IPR 015191:IPR005225:IPR004535; KEGG: aae:aq_1033 elongation factor SelB; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3; SPTR: O67141 Elongation factor SelB; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: Elongation factor SelB, winged helix; Elongation factor Tu GTP binding domain; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU
YP_005511963.1	COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR007229:IPR015977:IPR006405; KEGG: aae:aq_1056 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; PRIAM: Nicotinate phosphoribosyltransferase; SPTR: A8US61 Nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase
YP_005511964.1	COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: aae:aq_2059 hypothetical protein; PFAM: phosphoribosyltransferase; SPTR: A8UTC0 Putative uncharacterized protein; manually curated; PFAM: Phosphoribosyl transferase domain
YP_005511965.1	COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR013221:IPR004101:IPR016040:IPR000713:IPR 005758; KEGG: aae:aq_1360 UDP-N-acetylmuramate-alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: A8UTB7 UDP-N-acetylmuramate-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--alanine ligase
YP_005511966.1	COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156:IPR004610; KEGG: aae:aq_2155 single-strand-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: A8UQI8 Single-strand-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ
YP_005511967.1	COGs: COG2389 Uncharacterized metal-binding protein; InterPro IPR019250; KEGG: aae:aq_2157 hypothetical protein; PFAM: Protein of unknown function DUF2227, metal-binding; SPTR: A8UQI6 Putative uncharacterized protein; PFAM: Uncharacterized metal-binding protein (DUF2227)
YP_005511968.1	COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR016040:IPR014027:IPR008927:IPR001732:IPR 014026:IPR017476; KEGG: tye:THEYE_A0424 VI polysaccharide biosynthesis protein VipA/TviB; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: B5YJ56 VI polysaccharide biosynthesis protein VipA/tviB; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_005511969.1	COGs: COG0441 Threonyl-tRNA synthetase; InterPro IPR018163:IPR004154:IPR012947:IPR002314:IPR 018158:IPR002320:IPR006195; KEGG: aae:aq_1667 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; Anticodon-binding domain protein; SPTR: A8US89 Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase
YP_005511970.1	InterPro IPR014729; KEGG: tye:THEYE_A1200 universal stress protein, putative; SPTR: C2W446 Universal stress protein; PFAM: Universal stress protein family
YP_005511971.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123:IPR004552; KEGG: aae:aq_2058 2-acylglycerophosphoethanolamine acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: A8US87 2-acylglycerophosphoethanolamine acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005511972.1	COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; InterPro IPR002616:IPR004803; KEGG: aae:aq_1308 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: A8UVF4 Queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_005511973.1	KEGG: aae:aq_1571 hypothetical protein; SPTR: A8UUI2 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0227)
YP_005511974.1	COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871; KEGG: aae:aq_896 NifU protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: O67045 NifU-like protein; PFAM: NifU-like N terminal domain
YP_005511975.1	COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR018317; KEGG: hya:HY04AAS1_0405 thiamine biosynthesis protein; PFAM: Queuosine synthesis-like; SPTR: A8UYJ6 Putative uncharacterized protein; PFAM: Thiamine biosynthesis protein (ThiI)
YP_005511976.1	InterPro IPR001455; KEGG: hya:HY04AAS1_0404 SirA family protein; PFAM: SirA family protein; SPTR: A8UYJ4 Putative uncharacterized protein; PFAM: SirA-like protein
YP_005511977.1	InterPro IPR015077; KEGG: hya:HY04AAS1_0403 hypothetical protein; PFAM: Domain of unknown function DUF1858; SPTR: A8UYJ2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1858)
YP_005511978.1	InterPro IPR001075; KEGG: hya:HY04AAS1_0402 nitrogen-fixing NifU domain protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: A8UYJ1 Putative uncharacterized protein; PFAM: NifU-like domain
YP_005511979.1	COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR016040:IPR013708:IPR006151:IPR011342; KEGG: aae:aq_901 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; SPTR: O67049 Shikimate dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase
YP_005511980.1	COGs: COG1458 DNA-binding protein containing PIN domain; InterPro IPR014856; KEGG: aae:aq_880 hypothetical protein; PFAM: Protein of unknown function UPF0278; SPTR: A8UVW4 Putative uncharacterized protein; PFAM: UPF0278 family
YP_005511981.1	COGs: COG1423 ATP-dependent DNA ligase homolog of eukaryotic ligase III; InterPro IPR012310:IPR001072; KEGG: aae:aq_1106 hypothetical protein; PFAM: ATP dependent DNA ligase; SPTR: O67191 Putative uncharacterized protein; PFAM: ATP dependent DNA ligase domain; TIGRFAM: conserved hypothetical protein TIGR01209
YP_005511982.1	COGs: COG0481 Membrane GTPase LepA; InterPro IPR009022:IPR009000:IPR000640:IPR000795:IPR 004161:IPR013842:IPR005225:IPR006297; KEGG: aae:aq_1725 GTP-binding protein LepA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; GTP-binding protein LepA domain protein; SPTR: A8UT31 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_005511983.1	COGs: COG1200 RecG-like helicase; InterPro IPR016027:IPR014001:IPR001650:IPR004365:IPR 011545:IPR004609:IPR014021; KEGG: aae:aq_2053 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: O67837 ATP-dependent DNA helicase recG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG
YP_005511984.1	KEGG: aae:aq_766 hypothetical protein; SPTR: A8UTL8 Putative uncharacterized protein
YP_005511985.1	COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: aae:aq_765 hypothetical protein; PFAM: glycosyl transferase family 39; SPTR: O66965 Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_005511986.1	COGs: COG0344 membrane protein; InterPro IPR003811:IPR020788:IPR018062; KEGG: aae:aq_676 hypothetical protein; PFAM: protein of unknown function DUF205; SPTR: O66905 UPF0078 membrane protein aq_676; PFAM: Domain of unknown function (DUF205); TIGRFAM: conserved hypothetical integral membrane protein TIGR00023
YP_005511987.1	COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterPro IPR014729:IPR000991:IPR018318:IPR001674:IPR 011702:IPR006220:IPR004739:IPR017926; KEGG: aae:aq_236 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like; SPTR: O66601 GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_005511988.1	COGs: COG0797 Lipoprotein; InterPro IPR009009:IPR005132:IPR012997; KEGG: aae:aq_1174 rare lipoprotein A; PFAM: Rare lipoprotein A; SPTR: O67235 RlpA-like lipoprotein; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A
YP_005511989.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: sul:SYO3AOP1_0680 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B2V8P3 ABC transporter related; PFAM: ABC transporter; TIGRFAM: molybdenum ABC transporter, ATP-binding protein
YP_005511990.1	COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515:IPR011867; KEGG: saf:SULAZ_0046 molybdate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1DXD1 Molybdate ABC transporter, permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein
YP_005511991.1	InterPro IPR008995:IPR005116; KEGG: saf:SULAZ_0047 hypothetical protein; PFAM: TOBE domain protein; SPTR: C1DXD2 Putative uncharacterized protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain
YP_005511992.1	COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR006059:IPR005950; KEGG: saf:SULAZ_0049 molybdate ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1DXD4 Molybdate ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_005511993.1	COGs: COG3585 Molybdopterin-binding protein; InterPro IPR008995:IPR005116:IPR004606; KEGG: dae:Dtox_3442 TOBE domain protein; PFAM: TOBE domain protein; SPTR: C8W6Q6 TOBE domain protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain
YP_005511994.1	COGs: COG1910 Periplasmic molybdate-binding protein/domain; InterPro IPR010982:IPR001387; KEGG: pca:Pcar_0149 molybdate-binding domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Q3A882 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix
YP_005511995.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR016156:IPR006121:IPR004099:IPR013027:IPR 000815:IPR011796:IPR012999:IPR017969; KEGG: hya:HY04AAS1_1213 mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: A8UT36 Mercuric reductase MerA; TIGRFAM: mercuric reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase
YP_005511996.1	InterPro IPR006121:IPR001802; KEGG: abu:Abu_1506 heavy-metal transporting ATPase; PFAM: Heavy metal transport/detoxification protein; SPTR: A8UT35 Putative uncharacterized protein; PFAM: Heavy-metal-associated domain
YP_005511997.1	KEGG: hya:HY04AAS1_1211 membrane protein containing heavy metal transport/detoxification domain; SPTR: A8UT34 Mercuric transport protein MerT; PFAM: MerT mercuric transport protein
YP_005511998.1	COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: hya:HY04AAS1_1210 protein of unknown function DUF156; PFAM: protein of unknown function DUF156; SPTR: A8UT32 Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937
YP_005511999.1	COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; InterPro IPR006121:IPR000428:IPR017969; KEGG: aae:aq_1419 molybdopterin-guanine dinucleotide biosynthesis protein A; PFAM: Heavy metal transport/detoxification protein; SPTR: A8UVP0 Molybdopterin-guanine dinucleotide biosynthesis protein A; PFAM: Heavy-metal-associated domain
YP_005512000.1	COGs: COG2112 Ser/Thr protein kinase; InterPro IPR011009; KEGG: aae:aq_578 hypothetical protein; SPTR: O66846 Putative uncharacterized protein
YP_005512001.1	COGs: COG2231 Uncharacterized protein related to Endonuclease III; InterPro IPR011257:IPR003265; KEGG: aae:aq_172 endonuclease III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: A8UW35 Endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein
YP_005512002.1	COGs: COG2857 Cytochrome c1; InterPro IPR009056:IPR003088; KEGG: hya:HY04AAS1_1535 ubiquinol-cytochrome c reductase cytochrome c1 subunit; PFAM: cytochrome c class I; SPTR: A8UUQ7 Cytochrome c; PFAM: Cytochrome c
YP_005512003.1	COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR016174:IPR005798:IPR016175:IPR005797; KEGG: hya:HY04AAS1_1534 cytochrome b/b6 domain; PFAM: Cytochrome b/b6 domain; SPTR: A8UUQ5 Cytochrome b; PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD
YP_005512004.1	COGs: COG0723 Rieske Fe-S protein; InterPro IPR017941:IPR019470:IPR005805:IPR006317; KEGG: hya:HY04AAS1_1533 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; SPTR: A8UUQ4 Ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; Rieske [2Fe-2S] domain; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit
YP_005512005.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: nca:Noca_1338 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: A1SGB7 Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2
YP_005512006.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyt:cce_3460 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: B4VZT8 Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1
YP_005512007.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: aae:aq_2186 sulfide-quinone reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8URQ6 Sulfide-quinone reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005512008.1	COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR005747:IPR007696:IPR000432:IPR002625; KEGG: aae:aq_1242 DNA mismatch repair protein MutS; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2; SPTR: A8USA7 DNA mismatch repair protein MutS; TIGRFAM: MutS2 family protein; PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein
YP_005512009.1	COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: rmr:Rmar_1189 transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; SPTR: A7BLI4 Transposase ISC1316; PFAM: Putative transposase DNA-binding domain; TIGRFAM: transposase, IS605 OrfB family, central region
YP_005512010.1	KEGG: sai:Saci_1941 ISC1913-like transposase; SPTR: Q4J7I9 ISC1913-like transposase
YP_005512011.1	KEGG: cts:Ctha_2483 hypothetical protein; SPTR: A8UTG2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3108)
YP_005512012.1	InterPro IPR019734:IPR011990:IPR013026; KEGG: aae:aq_1409 hypothetical protein; SPTR: O67408 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_005512013.1	COGs: COG3634 Alkyl hydroperoxide reductase large subunit; InterPro IPR012336:IPR012335:IPR011903:IPR002109; KEGG: aae:aq_443 glutaredoxin-like protein; SPTR: A8UXG4 Glutaredoxin-like protein; TIGRFAM: glutaredoxin-like domain protein; PFAM: Thioredoxin; TIGRFAM: Glutaredoxin-like domain protein
YP_005512014.1	InterPro IPR013216; KEGG: rpf:Rpic12D_0598 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: A8UWQ9 Methylase involved in ubiquinone/menaquinone biosynthesis-like protein; PFAM: Methyltransferase domain
YP_005512015.1	COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR015424:IPR015421:IPR003329:IPR005814; KEGG: dal:Dalk_0629 aminotransferase class-III; PFAM: aminotransferase class-III; acylneuraminate cytidylyltransferase; SPTR: B8FJQ6 Aminotransferase class-III; PFAM: Cytidylyltransferase; Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_005512016.1	KEGG: spp:SPP_1353 hypothetical protein; SPTR: A8UWS0 Putative uncharacterized protein
YP_005512017.1	COGs: COG3980 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase; InterPro IPR020023; KEGG: msi:Msm_1538 CMP-sialic acid synthetase, NeuA; SPTR: A8UWQ8 Glycosyltransferase; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG
YP_005512018.1	COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034; KEGG: hya:HY04AAS1_0502 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: A8USP0 Putative uncharacterized protein; PFAM: NosL; DeoR-like helix-turn-helix domain
YP_005512019.1	KEGG: geo:Geob_2791 hypothetical protein; SPTR: A8URJ5 Putative uncharacterized protein
YP_005512020.1	COGs: COG1651 Protein-disulfide isomerase; InterPro IPR012336:IPR012335:IPR018950:IPR017936; KEGG: hya:HY04AAS1_0642 thiol:disulfide interchange protein; PFAM: Disulphide bond isomerase, DsbC/G-like; SPTR: A8USM4 Thiol:disulfide interchange protein; PFAM: Disulfide bond isomerase protein N-terminus
YP_005512021.1	COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR015424:IPR015421:IPR004839:IPR004723:IPR 001917; KEGG: aae:aq_626 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: O66875 Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase
YP_005512022.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011044:IPR015943:IPR011704; KEGG: aae:aq_2011 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_5; SPTR: O67811 Putative uncharacterized protein; PFAM: AAA domain (dynein-related subfamily)
YP_005512023.1	COGs: COG1110 Reverse gyrase; InterPro IPR000380:IPR014001:IPR006154:IPR003601:IPR 003602:IPR013826:IPR013824:IPR006171:IPR013497:IPR005736:I PR014021:IPR001650; KEGG: sul:SYO3AOP1_1663 reverse gyrase; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DEAD-like helicase; SPTR: B2V6S9 Reverse gyrase; TIGRFAM: reverse gyrase; PFAM: Toprim domain; DNA topoisomerase; DEAD/DEAH box helicase; TIGRFAM: reverse gyrase
YP_005512024.1	KEGG: hya:HY04AAS1_1060 hypothetical protein; SPTR: A8UUA4 Putative uncharacterized protein
YP_005512025.1	COGs: COG1154 Deoxyxylulose-5-phosphate synthase; InterPro IPR009014:IPR015941:IPR005475:IPR005476:IPR 005477:IPR005474:IPR020826; KEGG: aae:aq_881 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; SPTR: O67036 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_005512026.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509:IPR008089; KEGG: hya:HY04AAS1_1457 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8UVD0 Nucleotide sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_005512027.1	COGs: COG0474 Cation transport ATPase; InterPro IPR004014:IPR008250:IPR005834:IPR006068:IPR 001757:IPR000695:IPR018303; KEGG: sul:SYO3AOP1_0112 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: C4FIX7 Cation-transporting ATPase Pma1; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005512028.1	InterPro IPR002636; KEGG: sul:SYO3AOP1_1740 protein of unknown function DUF29; PFAM: protein of unknown function DUF29; SPTR: Q9AJL7 Putative uncharacterized protein; PFAM: Domain of unknown function DUF29
YP_005512029.1	COGs: COG0358 DNA primase; InterPro IPR002694:IPR006154:IPR013264:IPR006171:IPR 006295; KEGG: aae:aq_1493 DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; SPTR: A8UQQ4 DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; TIGRFAM: DNA primase, catalytic core
YP_005512030.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR013709:IPR013785:IPR000891:IPR005675:IPR 002034; KEGG: aae:aq_356 putative alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; PRIAM: (R)-citramalate synthase; SPTR: O66682 Uncharacterized AIPM/Hcit synthase family transferase aq_356; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein
YP_005512031.1	KEGG: aae:aq_796 hypothetical protein; SPTR: O66984 Uncharacterized protein aq_796
YP_005512032.1	COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447:IPR002143; KEGG: aae:aq_797 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: A8UTJ2 Carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_005512033.1	COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR000905:IPR017861:IPR017860; KEGG: aae:aq_801 sialoglycoprotease; PFAM: peptidase M22 glycoprotease; SPTR: A8UTJ1 Sialoglycoprotease; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: Glycoprotease family; TIGRFAM: metalloendopeptidase, putative, glycoprotease family
YP_005512034.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR015797:IPR000086:IPR020476:IPR020084; KEGG: aae:aq_158 AP4A hydrolase; PFAM: NUDIX hydrolase; SPTR: O66548 AP4A hydrolase; PFAM: NUDIX domain
YP_005512035.1	KEGG: hya:HY04AAS1_0514 conserved hypothetical lipoprotein; SPTR: B4U7U0 Conserved hypothetical lipoprotein
YP_005512036.1	COGs: COG0498 Threonine synthase; InterPro IPR001926:IPR004450:IPR000634; KEGG: aae:aq_425 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: O66740 Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_005512037.1	COGs: COG0009 Putative translation factor (SUA5); InterPro IPR017945:IPR006070:IPR004388; KEGG: aae:aq_651 hypothetical protein; PFAM: SUA5/yciO/yrdC domain; SPTR: O66889 Putative uncharacterized protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_005512038.1	COGs: COG1351 alternative thymidylate synthase; InterPro IPR003669; KEGG: aae:aq_640 thymidylate synthase complementing protein; PFAM: thymidylate synthase complementing protein ThyX; SPTR: A8UR90 Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent
YP_005512039.1	COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551; KEGG: pmx:PERMA_1350 hypothetical protein; PFAM: domain of unknown function DUF1732; YicC domain protein; SPTR: A8UTA5 Coproporphyrinogen III oxidase; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255
YP_005512040.1	COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR012336:IPR008928:IPR012335:IPR004879; KEGG: afu:AF1737 hypothetical protein; PFAM: protein of unknown function DUF255; SPTR: C8S9N9 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255
YP_005512041.1	KEGG: gbm:Gbem_2163 hypothetical protein; SPTR: A8UXS2 Putative uncharacterized protein
YP_005512042.1	COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568; KEGG: aae:aq_179 ATP synthase F0 subunit A; PFAM: H+transporting two-sector ATPase A subunit; SPTR: A8UV71 ATP synthase subunit a; TIGRFAM: ATP synthase F0, A subunit; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_005512043.1	InterPro IPR002379:IPR000454:IPR005953:IPR020537; KEGG: aae:aq_177 ATP synthase F0 subunit C; PFAM: H+transporting two-sector ATPase C subunit; SPTR: O66564 ATP synthase subunit c; TIGRFAM: ATP synthase F0, C subunit; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c
YP_005512044.1	COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: hya:HY04AAS1_0880 protein of unknown function DUF37; PFAM: protein of unknown function DUF37; SPTR: A8UV66 Putative uncharacterized protein; manually curated; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein TIGR00278
YP_005512045.1	COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708:IPR013308:IPR019998:IPR020001; KEGG: aae:aq_175 hypothetical protein; PFAM: 60 kDa inner membrane insertion protein; SPTR: A8UV65 Putative uncharacterized protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain
YP_005512046.1	COGs: COG0709 Selenophosphate synthase; InterPro IPR004536:IPR016188:IPR010918:IPR000728; KEGG: aae:aq_1030 selenophosphate synthase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; SPTR: A8UVI4 Selenophosphate synthase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein
YP_005512048.1	InterPro IPR011050:IPR006626:IPR003368; KEGG: chl:Chy400_0321 polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; SPTR: A6C557 Polymorphic membrane protein; TIGRFAM: polymorphic outer membrane protein; TIGRFAM: Chlamydial polymorphic outer membrane protein repeat; Listeria/Bacterioides repeat
YP_005512049.1	KEGG: mhu:Mhun_2030 major facilitator transporter; SPTR: B6K1K8 Rik1-associated factor 2
YP_005512050.1	COGs: COG1977 Molybdopterin converting factor small subunit; InterPro IPR016155:IPR012675:IPR003749; KEGG: aae:aq_1106a molybdopterin converting factor, small subunit; PFAM: thiamineS protein; SPTR: A8UU28 Molybdopterin converting factor, small subunit; PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal
YP_005512051.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: aae:aq_1543 ADP-heptose:LPS heptosyltransferase; PFAM: glycosyl transferase family 9; SPTR: O67498 ADP-heptose:LPS heptosyltransferase; PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_005512052.1	KEGG: aae:aq_058 hypothetical protein; SPTR: O66470 Uncharacterized protein aq_058
YP_005512053.1	COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005268; KEGG: aae:aq_134 hypothetical protein; SPTR: O66531 Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1
YP_005512054.1	KEGG: aae:aq_545 hypothetical protein; SPTR: O66822 Uncharacterized protein aq_545
YP_005512055.1	KEGG: pmx:PERMA_1116 hypothetical protein; SPTR: A8UT46 Putative uncharacterized protein
YP_005512056.1	COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: aae:aq_2110 acetoin utilization protein; PFAM: histone deacetylase superfamily; SPTR: O67877 Acetoin utilization protein; PFAM: Histone deacetylase domain
YP_005512057.1	KEGG: saf:SULAZ_1081 hypothetical protein; SPTR: C1DVB7 Putative uncharacterized protein
YP_005512058.1	KEGG: saf:SULAZ_1558 hypothetical protein; SPTR: C1DWN6 Putative uncharacterized protein
YP_005512059.1	COGs: COG0354 aminomethyltransferase related to GcvT; InterPro IPR006222:IPR013977:IPR017703; KEGG: saf:SULAZ_0939 glycine cleavage T-protein C-barrel domain protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; SPTR: A8UVY2 Putative uncharacterized protein; TIGRFAM: folate-binding protein YgfZ; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ
YP_005512060.1	COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891:IPR003379:IPR000089:IPR013785:IPR 001882:IPR011053; KEGG: aae:aq_1520 pyruvate carboxylase subunit B; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein; SPTR: Q05KD8 2-oxoglutarate carboxylase large subunit; PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain
YP_005512061.1	COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR013816:IPR011764:IPR013817:IPR005479:IPR 004549:IPR016185:IPR011054:IPR005482:IPR005481:IPR011761; KEGG: aae:aq_1517 pyruvate carboxylase N-terminal domain-containing protein; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; SMART: biotin carboxylase domain protein; SPTR: Q05KD9 2-oxoglutarate carboxylase small subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase
YP_005512062.1	COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR015946:IPR003718; KEGG: aae:aq_1515 hypothetical protein; PFAM: OsmC family protein; SPTR: Q05KE0 Putative uncharacterized protein; PFAM: OsmC-like protein
YP_005512063.1	COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: aae:aq_707 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: A8UW19 Reverse gyrase; PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO
YP_005512064.1	KEGG: saf:SULAZ_1558 hypothetical protein; SPTR: A8UTA2 Putative uncharacterized protein
YP_005512065.1	COGs: COG0077 Prephenate dehydratase; InterPro IPR008242:IPR020822:IPR001086:IPR002912:IPR 018528:IPR002701; KEGG: aae:aq_951 chorismate mutase/prephenate dehydratase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein; SPTR: A8UTM7 Chorismate mutase/prephenate dehydratase; PFAM: Prephenate dehydratase; Chorismate mutase type II
YP_005512066.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: aae:aq_1508 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: A8UY61 Glycyl-tRNA synthetase subunit alpha; PFAM: Protein of unknown function DUF58
YP_005512067.1	COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR001972; KEGG: saf:SULAZ_1585 SpfH domain protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: A8UVX4 RNA 3'-terminal-phosphate cyclase; PFAM: SPFH domain / Band 7 family
YP_005512068.1	COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR011066:IPR010920:IPR011014:IPR006685; KEGG: rxy:Rxyl_1210 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: Q1AWQ2 MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel
YP_005512069.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: sul:SYO3AOP1_1201 ADP-heptose:LPS heptosyltransferase-like protein; PFAM: glycosyl transferase family 9; SPTR: C4FJU0 Putative uncharacterized protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_005512070.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: aae:aq_2165 hypothetical protein; PFAM: ABC-3 protein; SPTR: O67916 Putative uncharacterized protein; PFAM: ABC 3 transport family; TIGRFAM: type IV conjugative transfer system protein TraL
YP_005512071.1	COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127:IPR006129:IPR006128; KEGG: aae:aq_2166 adhesion protein; PFAM: periplasmic solute binding protein; SPTR: O67917 Adhesion protein; PFAM: Periplasmic solute binding protein family
YP_005512072.1	KEGG: aae:aq_2168 hypothetical protein; SPTR: O67918 Uncharacterized protein aq_2168
YP_005512073.1	COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: aae:aq_1890 rRNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: A8UV59 rRNA methylase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3
YP_005512074.1	COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR014729:IPR018318:IPR004506; KEGG: aae:aq_1224 hypothetical protein; PFAM: tRNA methyl transferase-like; SPTR: A8UR99 Putative uncharacterized protein; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_005512075.1	KEGG: aae:aq_272 hypothetical protein; SPTR: A8URA0 Putative uncharacterized protein
YP_005512076.1	InterPro IPR009056; KEGG: nha:Nham_3676 cytochrome c, class I; SPTR: A8US34 Putative uncharacterized protein
YP_005512077.1	COGs: COG0552 Signal recognition particle GTPase; InterPro IPR013822:IPR003593:IPR000897:IPR004390:IPR 019734:IPR013026; KEGG: aae:aq_920 cell division protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; SPTR: A8UT65 Cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_005512078.1	COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: aae:aq_1310 NADH dehydrogenase I chain A; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: A8UR30 NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_005512079.1	COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006137:IPR006138; KEGG: aae:aq_1312 NADH dehydrogenase I chain B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: A8UR29 NADH dehydrogenase I chain B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit
YP_005512080.1	COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR001268:IPR001135:IPR010219; KEGG: aae:aq_1314 NADH dehydrogenase I chain D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: O67335 NADH-quinone oxidoreductase subunit C/D 2; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit
YP_005512081.1	KEGG: hya:HY04AAS1_0439 hypothetical protein; SPTR: A8URJ1 Putative uncharacterized protein
YP_005512082.1	KEGG: saf:SULAZ_1553 hypothetical protein; SPTR: A8URJ2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF465)
YP_005512083.1	COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR018317; KEGG: aae:aq_848 hypothetical protein; PFAM: Queuosine synthesis-like; SPTR: A8URJ3 Putative uncharacterized protein; PFAM: ExsB
YP_005512084.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: aae:aq_1010 dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8URJ4 Dehydrogenase; PFAM: short chain dehydrogenase
YP_005512085.1	COGs: COG0498 Threonine synthase; InterPro IPR001926:IPR004450; KEGG: aae:aq_608 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: O66864 Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_005512086.1	InterPro IPR012336:IPR012335:IPR000866:IPR017936; KEGG: sul:SYO3AOP1_0183 redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A8UUH4 Putative thioredoxin-family protein; PFAM: AhpC/TSA family
YP_005512087.1	COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR016185:IPR011054:IPR013817:IPR013816:IPR 003135:IPR005875:IPR011761; KEGG: aae:aq_245 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: A8USF3 Phosphoribosylaminoimidazole carboxylase ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein
YP_005512088.1	COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003952:IPR004112:IPR003953:IPR014006:IPR 015939; KEGG: aae:aq_594 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: B5BT00 Fumarate reductase, A subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
YP_005512089.1	COGs: COG2149 membrane protein; InterPro IPR003807; KEGG: aae:aq_913 hypothetical protein; PFAM: protein of unknown function DUF202; SPTR: O67058 Putative uncharacterized protein; PFAM: Domain of unknown function DUF
YP_005512090.1	COGs: COG0015 Adenylosuccinate lyase; InterPro IPR008948:IPR000362:IPR019468:IPR003031:IPR 004769:IPR020557; KEGG: aae:aq_597 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: A8URZ2 Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase
YP_005512091.1	InterPro IPR002636; KEGG: sul:SYO3AOP1_1740 protein of unknown function DUF29; PFAM: protein of unknown function DUF29; SPTR: Q9AJL7 Putative uncharacterized protein; PFAM: Domain of unknown function DUF29
YP_005512092.1	COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR005854:IPR000583:IPR000836:IPR017932; KEGG: aae:aq_1175 amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; SPTR: O67236 Amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_005512093.1	COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR013785:IPR006218:IPR006269; KEGG: aae:aq_085 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: A8USD0 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase
YP_005512094.1	COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; InterPro IPR002310:IPR006194; KEGG: aae:aq_945 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; PRIAM: Glycine--tRNA ligase; SPTR: O67081 Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit
YP_005512095.1	COGs: COG1530 Ribonuclease G and E; InterPro IPR016027:IPR012340:IPR003029:IPR019307:IPR 004659; KEGG: pmx:PERMA_0998 ribonuclease G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: A8UTH4 Cytoplasmic axial filament protein; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family
YP_005512096.1	COGs: COG4105 DNA uptake lipoprotein; InterPro IPR011990:IPR017689:IPR019734:IPR013026; KEGG: aae:aq_1273 hypothetical protein; SPTR: A8UTH6 Putative uncharacterized protein; TIGRFAM: outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO
YP_005512097.1	COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: aae:aq_1272 hypothetical protein; PFAM: Iojap-related protein; SPTR: O67309 Putative uncharacterized protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein
YP_005512098.1	KEGG: hya:HY04AAS1_1150 hypothetical protein; SPTR: A8UTH8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1049)
YP_005512099.1	COGs: COG2229 GTPase; InterPro IPR001806:IPR005225; KEGG: aae:aq_1560 gliding motility protein; SPTR: A8UTH9 Gliding motility protein; TIGRFAM: small GTP-binding protein; PFAM: ADP-ribosylation factor family; TIGRFAM: small GTP-binding protein domain
YP_005512100.1	KEGG: aae:aq_1562 hypothetical protein; SPTR: A8UTI0 Putative uncharacterized protein
YP_005512101.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: hya:HY04AAS1_1151 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B4U9M6 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005512102.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR009082:IPR003660:IPR003661:IPR 004358:IPR005467; KEGG: hya:HY04AAS1_1011 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: B4U986 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005512103.1	KEGG: pap:PSPA7_3482 hypothetical protein; SPTR: A8UTD1 Putative uncharacterized protein
YP_005512104.1	InterPro IPR011990:IPR013105:IPR019734:IPR013026; KEGG: hya:HY04AAS1_1459 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SPTR: A8UXQ8 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_005512105.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: aae:aq_1207 FUR family transcriptional regulator; PFAM: ferric-uptake regulator; SPTR: A8UQK5 Transcriptional regulator (FurR family) protein; PFAM: Ferric uptake regulator family
YP_005512106.1	COGs: COG2154 Pterin-4a-carbinolamine dehydratase; InterPro IPR001533; KEGG: aae:aq_049 pterin-4A-carbinolamine dehydratase; PFAM: transcriptional coactivator/pterin dehydratase; SPTR: A8UW03 Pterin-4a-carbinolamine dehydratase; PFAM: Pterin 4 alpha carbinolamine dehydratase
YP_005512107.1	KEGG: tye:THEYE_A0595 hypothetical protein; SPTR: B5YJM3 Putative uncharacterized protein
YP_005512108.1	InterPro IPR012902; KEGG: sul:SYO3AOP1_1014 hypothetical protein; SPTR: B2V9L0 Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005512109.1	InterPro IPR012902; KEGG: saf:SULAZ_1010 prepilin-type N-cleavage/methylation domain protein; SPTR: C1DV46 Prepilin-type N-cleavage/methylation domain protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005512110.1	COGs: COG4970 Tfp pilus assembly protein FimT; InterPro IPR012902; KEGG: saf:SULAZ_1011 prokaryotic N-methylation motif domain protein; SPTR: C1DV47 Prokaryotic N-methylation motif domain protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005512111.1	COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; InterPro IPR018247; KEGG: sul:SYO3AOP1_1017 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; SPTR: B2V9L3 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_005512112.1	KEGG: sul:SYO3AOP1_1018 hypothetical protein; SPTR: C4FIW5 Putative uncharacterized protein
YP_005512113.1	KEGG: saf:SULAZ_0101 hypothetical protein; SPTR: C1DXI6 Putative uncharacterized protein
YP_005512114.1	COGs: COG0164 Ribonuclease HII; InterPro IPR012337:IPR001352; KEGG: aae:aq_1955 RNase HII; PFAM: ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: A8UUK9 Ribonuclease; PFAM: Ribonuclease HII
YP_005512115.1	COGs: COG0335 Ribosomal protein L19; InterPro IPR001857:IPR018257; KEGG: hya:HY04AAS1_1046 50S ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: B4U9C1 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_005512116.1	SPTR: A8UV58 Putative uncharacterized protein
YP_005512117.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120:IPR004412:IPR020556; KEGG: aae:aq_247 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; SPTR: O66610 Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit
YP_005512118.1	COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR005776:IPR000891:IPR003379:IPR000089:IPR 013785:IPR001882:IPR011053; KEGG: aae:aq_1614 pyruvate carboxylase subunit B; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein; SPTR: Q05KD6 Pyruvate carboxylase large subunit; TIGRFAM: oxaloacetate decarboxylase alpha subunit; PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit
YP_005512119.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR011991:IPR001867; KEGG: aae:aq_319 transcriptional regulator (PhoB-like); PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: Q05KD5 Putative PhoB-like transcriptional regulator (Fragment); PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005512120.1	COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: sul:SYO3AOP1_1218 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: B2VA56 Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_005512121.1	COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR017456:IPR000991:IPR004468:IPR017926; KEGG: aae:aq_1334 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: A8UU02 CTP synthetase; TIGRFAM: CTP synthase; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_005512122.1	COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: aae:aq_979 hypothetical protein; PFAM: oxidoreductase molybdopterin binding; SPTR: A8UUG9 Putative uncharacterized protein; PFAM: Oxidoreductase molybdopterin binding domain
YP_005512123.1	COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR020103:IPR002942:IPR006145:IPR000748:IPR 018496; KEGG: aae:aq_1464 hypothetical protein; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: A8UYH6 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase family
YP_005512124.1	InterPro IPR012336:IPR012335; KEGG: hya:HY04AAS1_1262 thioredoxin domain; SPTR: A8UYH4 Putative uncharacterized protein; PFAM: Thioredoxin
YP_005512125.1	KEGG: similar to predicted protein; SPTR: B4SA19 Putative uncharacterized protein
YP_005512126.1	COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003593:IPR003439:IPR004602:IPR017871; KEGG: aae:aq_686 excinuclease ABC subunit A; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8UY32 Repair excision nuclease subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_005512127.1	COGs: COG3258 Cytochrome c; InterPro IPR009056:IPR003088; KEGG: hna:Hneap_1476 cytochrome c class I; PFAM: cytochrome c class I; SPTR: C7I4V2 Cytochrome c class I; PFAM: Cytochrome c
YP_005512129.1	InterPro IPR009056; KEGG: bur:Bcep18194_B0409 cytochrome c, class I; SPTR: Q39AI6 Cytochrome c, class I; PFAM: Cytochrome c
YP_005512130.1	InterPro IPR005242; KEGG: hya:HY04AAS1_1341 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8UVN5 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein
YP_005512131.1	COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012340:IPR012308:IPR012310:IPR012309:IPR 000977:IPR016059; KEGG: dth:DICTH_0616 thermostable DNA ligase; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein; PRIAM: DNA ligase (ATP); SPTR: B5YD88 Probable DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
YP_005512132.1	KEGG: hor:Hore_18640 fimbrial assembly family protein; SPTR: B8CZ94 Fimbrial assembly family protein
YP_005512133.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR013325:IPR013324:IPR011991:IPR007127:IPR 009042:IPR007627:IPR007624:IPR007630:IPR000943:IPR014284:I PR012760; KEGG: aae:aq_1490 RNA polymerase sigma factor RpoD; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; SPTR: A8UQQ5 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_005512134.1	COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: tgr:Tgr7_0813 nitroreductase; PFAM: nitroreductase; SPTR: B8GN43 Nitroreductase; PFAM: Nitroreductase family
YP_005512135.1	COGs: COG1926 phosphoribosyltransferase; KEGG: saf:SULAZ_1382 phosphoribosyltransferase; SPTR: A8US27 Putative uncharacterized protein; PFAM: Phosphoribosyl transferase domain
YP_005512136.1	InterPro IPR018664; KEGG: hya:HY04AAS1_1618 hypothetical protein; PFAM: Protein of unknown function DUF2103, metal-binding; SPTR: B4U6G3 Putative uncharacterized protein; PFAM: Predicted metal-binding protein (DUF2103)
YP_005512137.1	COGs: COG1521 Putative transcriptional regulator protein; InterPro IPR004619; KEGG: aae:aq_1924 hypothetical protein; PFAM: Bvg accessory factor; SPTR: A8URH7 Putative uncharacterized protein; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III
YP_005512138.1	COGs: COG0083 Homoserine kinase; InterPro IPR000870:IPR020568:IPR014721:IPR006204:IPR 013750:IPR006203; KEGG: aae:aq_1309 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; SPTR: A8URH5 Homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase
YP_005512139.1	InterPro IPR000064; KEGG: tex:Teth514_0626 NLP/P60 protein; PFAM: NLP/P60 protein; SPTR: C6PH39 NLP/P60 protein; manually curated; PFAM: NlpC/P60 family
YP_005512140.1	COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: sul:SYO3AOP1_0909 ApbE family lipoprotein; PFAM: ApbE family lipoprotein; SPTR: B2V9B4 ApbE family lipoprotein; manually curated; PFAM: ApbE family
YP_005512141.1	COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: aae:aq_2188 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III; SPTR: A8UU90 Cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase subunit III
YP_005512142.1	COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR012336:IPR012335; KEGG: aae:aq_2189 hypothetical protein; SPTR: A8URQ4 Putative uncharacterized protein
YP_005512143.1	COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR008972:IPR015964:IPR011759:IPR002429:IPR 014222:IPR001505; KEGG: aae:aq_2190 cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; SPTR: A8URQ3 Cytochrome c oxidase subunit 2; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II
YP_005512144.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: aae:aq_2191 cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I; SPTR: A8URQ2 Cytochrome c oxidase subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_005512145.1	COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: hya:HY04AAS1_0523 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: B4U7U9 4-vinyl reductase 4VR; PFAM: V4R domain
YP_005512146.1	InterPro IPR012827:IPR012312; KEGG: pmx:PERMA_1876 hemerythrin sipunculid; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: C0QSJ3 Hemerythrin sipunculid; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain
YP_005512148.1	KEGG: aae:aq_1428 hypothetical protein; SPTR: A8UYQ3 Putative uncharacterized protein
YP_005512149.1	KEGG: hma:rrnAC1152 halocyanin precursor-like; SPTR: A8URQ1 Putative uncharacterized protein
YP_005512150.1	COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR008972:IPR002429:IPR001505; KEGG: aae:aq_2191a cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; SPTR: A8URQ0 Cytochrome c oxidase subunit II; PFAM: Cytochrome C oxidase subunit II, periplasmic domain
YP_005512151.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: aae:aq_2192 cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I; SPTR: A8URP8 Cytochrome c oxidase subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_005512152.1	COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR012336:IPR012335:IPR000866; KEGG: aae:aq_2194 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A8URP7 Putative uncharacterized protein; PFAM: SCO1/SenC
YP_005512153.1	COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR000312:IPR017459:IPR005940; KEGG: aae:aq_196 phosphoribosylanthranilate transferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; SPTR: A8UXX3 Phosphoribosylanthranilate transferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase
YP_005512154.1	COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: hya:HY04AAS1_0146 protein of unknown function DUF178; PFAM: protein of unknown function DUF178; SPTR: A8UUI4 Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178)
YP_005512155.1	InterPro IPR008816; KEGG: aae:aq_615 hypothetical protein; PFAM: 17 kDa surface antigen; SPTR: O66867 Uncharacterized lipoprotein aq_615
YP_005512156.1	COGs: COG1544 Ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: aae:aq_1603 hypothetical protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; SPTR: A8UXI9 Putative uncharacterized protein; TIGRFAM: ribosomal subunit interface protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_005512157.1	COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376:IPR004607:IPR001555; KEGG: aae:aq_857 phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: A8URG0 Phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_005512158.1	COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017; KEGG: saf:SULAZ_1513 putative dehydrogenase complex, E1 component, alpha subunit; PFAM: dehydrogenase E1 component; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: A8UYT4 Dehydrogenase complex, E1 component, alpha subunit; PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit
YP_005512159.1	COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR009014:IPR015941:IPR005475:IPR005476; KEGG: saf:SULAZ_1514 pyruvate dehydrogenase E1 component subunit beta, precursor (pdhe1-b); PFAM: Transketolase central region; Transketolase domain protein; SPTR: C1DWJ4 Pyruvate dehydrogenase e1 component suBunit beta, (Pdhe1-b); PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_005512160.1	COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR011053:IPR000089:IPR001078:IPR003016; KEGG: saf:SULAZ_1516 dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvatedehydrogenase complex, (pyruvatedehydrogenase complex E2 subunit 2) (pdce2) (e2) (dihydrolipoamide S-acetyltransferase component 2 of pyruvate dehydrogenase complex) (pdc-e2); PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; PRIAM: Dihydrolipoyllysine-residue acetyltransferase; SPTR: C1DWJ5 Putative uncharacterized protein; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme
YP_005512161.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR016156:IPR004099:IPR013027:IPR000815:IPR 012999; KEGG: sun:SUN_1208 pyruvate/2-oxoglutarate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: A6Q9K4 Dihydrolipoyl dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005512162.1	COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760:IPR020550; KEGG: aae:aq_1983 myo-inositol-1(or 4)-monophosphatase; PFAM: inositol monophosphatase; SPTR: A8UV20 Myo-inositol-1(Or 4)-monophosphatase; PFAM: Inositol monophosphatase family
YP_005512163.1	COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR014729:IPR006016:IPR006015; KEGG: aae:aq_855 hypothetical protein; PFAM: UspA domain protein; SPTR: A8UV19 Putative uncharacterized protein; PFAM: Universal stress protein family
YP_005512164.1	COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734:IPR011990:IPR001440:IPR013105:IPR 011716:IPR013026; KEGG: aae:aq_854 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; SPTR: A8UV17 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_005512165.1	InterPro IPR005495; KEGG: aae:aq_539 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: A8UU62 Putative uncharacterized protein; PFAM: Predicted permease YjgP/YjgQ family
YP_005512166.1	KEGG: hypothetical protein; SPTR: B3L857 Putative uncharacterized protein
YP_005512167.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR009057:IPR001789:IPR003593:IPR 002078; KEGG: aae:aq_164 NtrC family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: A8UR84 Transcriptional regulator (NtrC family) protein; PFAM: Response regulator receiver domain; Sigma-54 interaction domain
YP_005512168.1	KEGG: hya:HY04AAS1_1031 hypothetical protein; SPTR: B4U9A6 Putative uncharacterized protein
YP_005512169.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: nar:Saro_2066 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: Q2G6L8 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005512170.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR009082:IPR003661:IPR005467; KEGG: tye:THEYE_A0751 sensor histidine kinase, putative; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; SPTR: B5YK28 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005512171.1	KEGG: sul:SYO3AOP1_1709 hypothetical protein; SPTR: B2V6X5 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2231)
YP_005512172.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: pmx:PERMA_0877 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A8UWA8 DNA-directed RNA polymerase subunit alpha; PFAM: Outer membrane efflux protein
YP_005512173.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: aae:aq_468 cation efflux system (CzcB-like); PFAM: secretion protein HlyD family protein; SPTR: O66769 Cation efflux system (CzcB-like); TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005512174.1	COGs: COG3696 Putative silver efflux pump; InterPro IPR001036:IPR004763; KEGG: saf:SULAZ_0690 cation efflux system protein CzcA; PFAM: acriflavin resistance protein; SPTR: C1DU88 Cation efflux system protein CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_005512175.1	COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR002645:IPR011547:IPR001902; KEGG: aae:aq_1268 high affinity sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: A8URU6 High affinity sulfate transporter; TIGRFAM: sulfate transporter; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1
YP_005512176.1	COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR014729:IPR004820:IPR004821:IPR005248; KEGG: saf:SULAZ_0934 nicotinate-nucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: A8UV89 Putative uncharacterized protein; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; Cytidylyltransferase C-terminal domain (DUF2432); TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_005512177.1	COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: aae:aq_835 NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B5BT03 Fumarate reductase, D subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005512178.1	KEGG: saf:SULAZ_1092 hypothetical protein; SPTR: C1DUH2 Putative uncharacterized protein; manually curated
YP_005512179.1	InterPro IPR012336:IPR012335:IPR017936; KEGG: aae:aq_1811 thioredoxin; SPTR: A8UQT3 Thioredoxin; PFAM: Thioredoxin
YP_005512180.1	COGs: COG5501 secreted protein; InterPro IPR016568:IPR006311; KEGG: aae:aq_1810 hypothetical protein; SPTR: O67675 Putative uncharacterized protein
YP_005512181.1	InterPro IPR014880; KEGG: aae:aq_1809 hypothetical protein; PFAM: Sulphur oxidation protein SoxZ; SPTR: A8UQT6 Putative uncharacterized protein; PFAM: Sulphur oxidation protein SoxZ
YP_005512182.1	InterPro IPR009056; KEGG: aae:aq_1807 hypothetical protein; SPTR: O67673 Putative uncharacterized protein
YP_005512183.1	InterPro IPR009056; KEGG: aae:aq_1807 hypothetical protein; SPTR: O67673 Putative uncharacterized protein
YP_005512184.1	InterPro IPR016823:IPR009056:IPR003088; KEGG: aae:aq_1806 hypothetical protein; PFAM: cytochrome c class I; SPTR: Q72IT1 Putative uncharacterized protein; PFAM: Cytochrome c
YP_005512185.1	COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR008334:IPR004843:IPR006179:IPR006311:IPR 017909; KEGG: aae:aq_1803 sulfur oxidation protein SoxB; PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; SPTR: O67671 Sulfur oxidation protein SoxB; PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain
YP_005512186.1	COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: aae:aq_1800 hypothetical protein; PFAM: protein of unknown function DUF302; SPTR: A8UQU2 Putative uncharacterized protein; PFAM: Domain of unknown function DUF302
YP_005512187.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: aae:aq_1798 beta lactamase precursor; SPTR: O67667 Beta lactamase; PFAM: Metallo-beta-lactamase superfamily
YP_005512188.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR011146:IPR011151:IPR001310:IPR019808; KEGG: aae:aq_141 protein kinase C inhibitor; PFAM: histidine triad (HIT) protein; SPTR: O66536 Uncharacterized HIT-like protein aq_141; PFAM: HIT domain
YP_005512189.1	COGs: COG1565 conserved hypothetical protein; InterPro IPR003788; KEGG: aae:aq_622 hypothetical protein; PFAM: protein of unknown function DUF185; SPTR: O66873 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1565
YP_005512190.1	KEGG: hya:HY04AAS1_1261 hypothetical protein; SPTR: A8UYB1 Putative uncharacterized protein
YP_005512191.1	COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804:IPR004429:IPR019818; KEGG: aae:aq_244 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: A8UYA9 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase
YP_005512192.1	COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017:IPR017900:IPR017896; KEGG: hya:HY04AAS1_0898 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A8UYH8 Putative ferredoxin (Fragment); PFAM: Cysteine-rich domain; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit
YP_005512193.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR015424:IPR015421:IPR004839:IPR005861; KEGG: aae:aq_2084 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: O67857 Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_005512194.1	KEGG: mvu:Metvu_0546 chromosome segregation protein SMC; SPTR: A8UUY3 Putative uncharacterized protein
YP_005512195.1	COGs: COG3016 Uncharacterized iron-regulated protein; InterPro IPR007314; KEGG: aae:aq_1477 hypothetical protein; PFAM: protein of unknown function DUF399; SPTR: O67454 Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function, DUF399
YP_005512196.1	COGs: COG0353 Recombinational DNA repair protein (RecF pathway); InterPro IPR000093:IPR006154:IPR015967:IPR006171; KEGG: aae:aq_1478 recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein; SPTR: A8UTV5 Recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_005512197.1	KEGG: hya:HY04AAS1_0243 hypothetical protein; SPTR: A8UTV6 Putative uncharacterized protein
YP_005512198.1	COGs: COG1260 Myo-inositol-1-phosphate synthase; InterPro IPR002587:IPR016040:IPR013021; KEGG: aae:aq_1763 hypothetical protein; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; SPTR: O67641 Putative uncharacterized protein; PFAM: Myo-inositol-1-phosphate synthase
YP_005512199.1	KEGG: aae:aq_255 hypothetical protein; SPTR: A8UT98 Putative uncharacterized protein
YP_005512200.1	COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR011053:IPR002930:IPR017453; KEGG: aae:aq_1108 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: A8UWB4 Acetyltransferase; TIGRFAM: glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_005512201.1	COGs: COG0403 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain; InterPro IPR015424:IPR015421:IPR020580; KEGG: aae:aq_1109 glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein-like; PRIAM: Glycine dehydrogenase (decarboxylating); SPTR: A8UWB6 Glycine dehydrogenase (Decarboxylating); PFAM: Glycine cleavage system P-protein
YP_005512202.1	COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR016181:IPR000182:IPR020036; KEGG: wsu:WS2108 flagellar protein G FlaG; PFAM: GCN5-related N-acetyltransferase; SPTR: Q7M7S9 FLAGELLAR PROTEIN G FLAG; TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase
YP_005512203.1	COGs: COG2089 Sialic acid synthase; InterPro IPR006190:IPR013785:IPR013132:IPR013974:IPR 020030; KEGG: cby:CLM_3086 pseudaminic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acetylneuraminate synthase; SPTR: C6Q9G1 N-acylneuraminate-9-phosphate synthase; TIGRFAM: pseudaminic acid synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase
YP_005512204.1	COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR016040:IPR020025:IPR003869; KEGG: dsa:Desal_3630 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: A8UWS3 UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase
YP_005512205.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015424:IPR015421:IPR015422:IPR 020026; KEGG: msi:Msm_1536 pleiotropic regulatory protein DegT (PLP-dependent); PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8UWS2 DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
YP_005512206.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR020471:IPR001395; KEGG: swo:Swol_0202 oxidoreductase; PFAM: aldo/keto reductase; SPTR: A8UWR3 Aldo/keto reductase; PFAM: Aldo/keto reductase family
YP_005512207.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR018368:IPR001270:IPR003593:IPR004176:IPR 003959:IPR013093:IPR019489; KEGG: aae:aq_1672 ATPase subunit of ATP-dependent protease; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8UTS2 ATPase subunit of ATP-dependent protease; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)
YP_005512208.1	COGs: COG1160 GTPase; InterPro IPR006073:IPR016484:IPR015946:IPR005225:IPR 002917; KEGG: aae:aq_1919 GTP-binding protein EngA; PFAM: GTP-binding protein HSR1-related; SPTR: O67749 GTP-binding protein engA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain
YP_005512209.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: aae:aq_2160 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: O67913 ABC transporter; PFAM: ABC transporter
YP_005512210.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR011146:IPR011151:IPR001310; KEGG: aae:aq_2159 hypothetical protein; SPTR: O67912 Putative uncharacterized protein; PFAM: HIT domain
YP_005512211.1	InterPro IPR012336:IPR012335; KEGG: aae:aq_419 hypothetical protein; SPTR: O66735 Putative uncharacterized protein; PFAM: Thioredoxin
YP_005512212.1	COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR010917:IPR012910:IPR000531; KEGG: pna:Pnap_3599 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: C0N7T2 TonB-dependent receptor domain protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor
YP_005512213.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR001789; KEGG: cyb:CYB_1654 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q2JL09 Response regulator; PFAM: Response regulator receiver domain
YP_005512214.1	COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR005467:IPR011495; KEGG: rci:LRC339 putative signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Q0W8I2 Putative signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005512215.1	COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086:IPR001694; KEGG: aae:aq_1315 NADH dehydrogenase I chain H; PFAM: respiratory-chain NADH dehydrogenase subunit 1; SPTR: A8UR25 NADH dehydrogenase I chain H; PFAM: NADH dehydrogenase
YP_005512216.1	COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR011894:IPR002869; KEGG: saf:SULAZ_0657 pyruvate:ferredoxin oxidoreductase gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: Q9LBF7 Pyruvate:ferredoxin oxidoreductase gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
YP_005512217.1	COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: hya:HY04AAS1_1636 thiamine pyrophosphate protein domain protein TPP-binding; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Q9LBF8 Pyruvate:ferredoxin oxidoreductase beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005512218.1	COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR009014:IPR005476:IPR002880:IPR015941; KEGG: saf:SULAZ_0655 pyruvate:ferredoxin oxidoreductase alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; SPTR: Q9LBF9 Pyruvate:ferredoxin oxidoreductase alpha subunit; PFAM: domain; Transketolase, C-terminal domain
YP_005512219.1	InterPro IPR003704; KEGG: aae:aq_1192 hypothetical protein; PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; SPTR: Q9LBG0 Pyruvate:ferredoxin oxidoreductase delta subunit; PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
YP_005512220.1	COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit; InterPro IPR017896; KEGG: hya:HY04AAS1_1059 ferredoxin; SPTR: Q9LBG1 Pyruvate:ferredoxin oxidoreductase epsilon subunit
YP_005512221.1	COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151; KEGG: dhd:Dhaf_4427 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: C6PWI1 Carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_005512222.1	COGs: COG0645 kinase; KEGG: aae:aq_1484 hypothetical protein; SPTR: O67460 Putative uncharacterized protein; PFAM: Chloramphenicol phosphotransferase-like protein
YP_005512223.1	COGs: COG1651 Protein-disulfide isomerase; InterPro IPR012336:IPR012335; KEGG: aae:aq_1740 hypothetical protein; SPTR: A8URF8 Putative uncharacterized protein
YP_005512224.1	COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR012337:IPR006055:IPR013520; KEGG: aae:aq_2108 hypothetical protein; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: A8UVH7 Putative uncharacterized protein; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family
YP_005512225.1	COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR018490:IPR014710:IPR000595:IPR000644:IPR 005105:IPR018821; KEGG: tye:THEYE_A0034 putative nucleotidyltransferase family; PFAM: Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; protein of unknown function DUF294 nucleotidyltransferase putative; CBS domain containing protein; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; CBS domain containing protein; SPTR: A8UVH6 Putative uncharacterized protein; PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294
YP_005512226.1	COGs: COG4147 symporter; InterPro IPR018212:IPR019900:IPR001734; KEGG: tye:THEYE_A0030 cation/acetate symporter ActP; PFAM: Na+/solute symporter; SPTR: B5YGV4 Cation/acetate symporter ActP; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily
YP_005512227.1	COGs: COG3162 membrane protein; InterPro IPR007436; KEGG: saf:SULAZ_1442 membrane protein; PFAM: protein of unknown function DUF485; SPTR: B3WUS0 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF485
YP_005512228.1	InterPro IPR016155:IPR012675:IPR010035:IPR003749; KEGG: hya:HY04AAS1_1142 thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; SPTR: A8UYB3 Thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS
YP_005512229.1	COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; InterPro IPR008867:IPR013785; KEGG: aae:aq_2178 thiazole synthase; PFAM: thiazole biosynthesis family protein; SPTR: A8UYB6 Thiamine biosynthesis, thiazole moiety; PFAM: Thiazole biosynthesis protein ThiG
YP_005512230.1	COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR000759:IPR004572:IPR002937; KEGG: aae:aq_2015 protoporphyrinogen oxidase; PFAM: amine oxidase; SPTR: A8UYB9 Protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase
YP_005512231.1	COGs: COG0176 Transaldolase; InterPro IPR018225:IPR013785:IPR004731:IPR001585; KEGG: aae:aq_119 putative translaldolase; PFAM: Transaldolase; SPTR: O66520 Probable transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; TIGRFAM: transaldolase, putative, TalC family
YP_005512232.1	COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478:IPR004387:IPR008915; KEGG: aae:aq_1964 hypothetical protein; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: A8UV75 Putative uncharacterized protein; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP
YP_005512233.1	COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: aae:aq_1965 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: O67777 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: conserved hypothetical protein TIGR00149
YP_005512234.1	COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: aae:aq_1655 hypothetical protein; PFAM: 4-vinyl reductase 4VR; SPTR: A8UVQ3 Putative uncharacterized protein; PFAM: V4R domain; TIGRFAM: bacteriochlorophyll 4-vinyl reductase
YP_005512235.1	COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: pho:PH0311 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: A8UVQ4 Putative uncharacterized protein; PFAM: Domain of unknown function DUF59
YP_005512236.1	COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR016040:IPR005886:IPR001509; KEGG: aae:aq_1069 UDP-glucose-4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: O67164 UDP-glucose-4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_005512237.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR018368:IPR001270:IPR003593:IPR001943:IPR 004176:IPR003959:IPR013093:IPR019489; KEGG: aae:aq_1296 ATP-dependent Clp protease; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8UVR3 ATP-dependent Clp protease; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif
YP_005512238.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cch:Cag_1481 glycosyltransferase-like protein; PFAM: glycosyl transferase group 1; SPTR: Q3AQI8 Glycosyltransferase-like; PFAM: Glycosyl transferases group 1
YP_005512239.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mar:MAE_13210 putative glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: B0JTV5 Putative glycosyl transferase; PFAM: Glycosyl transferases group 1
YP_005512240.1	KEGG: GE19518 gene product from transcript GE19518-RA; SPTR: B4PI42 GE19518
YP_005512241.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: cts:Ctha_2151 LmbE family protein; PFAM: LmbE family protein; SPTR: B3QVK3 LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase
YP_005512242.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tro:trd_0418 putative glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: B9KY75 Putative glycosyltransferase; PFAM: Glycosyl transferases group 1
YP_005512243.1	COGs: COG4229 enolase-phosphatase; InterPro IPR005833:IPR010041:IPR006439:IPR005834; KEGG: saf:SULAZ_1667 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; PRIAM: Acireductone synthase; SPTR: A8UQN2 Enolase-phosphatase E-1; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
YP_005512244.1	COGs: COG1791 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR011051:IPR014710:IPR004313; KEGG: hya:HY04AAS1_1513 acireductone dioxygenase ARD; PFAM: Acireductone dioxygenase ARD; PRIAM: Acireductone dioxygenase (Fe(2+)-requiring); SPTR: B4U606 Acireductone dioxygenase; PFAM: ARD/ARD' family
YP_005512245.1	COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304:IPR016040:IPR004455; KEGG: aae:aq_166 pyrroline carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: A8UYC7 Pyrroline carboxylate reductase (Fragment); TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_005512246.1	COGs: COG1496 conserved hypothetical protein; InterPro IPR011324:IPR003730; KEGG: aae:aq_167 hypothetical protein; PFAM: protein of unknown function DUF152; SPTR: A8UXU1 Putative uncharacterized protein (Fragment); PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726
YP_005512247.1	COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: mpt:Mpe_A0492 cation efflux system protein; PFAM: cation efflux protein; SPTR: A2SD15 Cation efflux system protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_005512248.1	COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR017918:IPR002187:IPR011322:IPR015867; KEGG: aae:aq_109 nitrogen regulatory PII protein; PFAM: nitrogen regulatory protein P-II; SPTR: O66513 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II
YP_005512249.1	COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR014746:IPR004809:IPR008146; KEGG: aae:aq_111 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: O66514 Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_005512250.1	COGs: COG0004 Ammonia permease; InterPro IPR018047:IPR001905; KEGG: tye:THEYE_A1707 ammonium transporter; PFAM: ammonium transporter; SPTR: B5YH08 Ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_005512251.1	KEGG: hya:HY04AAS1_0937 hypothetical protein; SPTR: B4U913 Putative uncharacterized protein
YP_005512252.1	COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR006355:IPR006357:IPR005834; KEGG: pmx:PERMA_0929 HAD-superfamily subfamily IIA hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: C0QPX0 HAD-superfamily subfamily IIA hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily subfamily IIA hydrolase, TIGR01458
YP_005512253.1	COGs: COG0518 GMP synthase - Glutamine amidotransferase domain; InterPro IPR017926:IPR000991; KEGG: tna:CTN_1417 glutamine amidotransferase class-I; PFAM: glutamine amidotransferase class-I; SPTR: B9K9G0 Glutamine amidotransferase class-I; PFAM: Glutamine amidotransferase class-I
YP_005512254.1	COGs: COG2107 periplasmic solute-binding protein; InterPro IPR003794; KEGG: aae:aq_313 hypothetical protein; PFAM: protein of unknown function DUF191; SPTR: A8UVM7 Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178)
YP_005512255.1	COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: aae:aq_987 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; SPTR: O67112 UPF0189 protein aq_987; PFAM: Macro domain
YP_005512256.1	COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis; KEGG: aae:aq_1155 histidyl-tRNA synthetase; SPTR: A8USD5 Histidyl-tRNA synthetase
YP_005512257.1	COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: aae:aq_1154 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: O67222 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase
YP_005512258.1	COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR018156:IPR002317:IPR010978:IPR015866:IPR 006195:IPR002314; KEGG: aae:aq_298 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: A8URF2 Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase
YP_005512259.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020084:IPR020476:IPR015797:IPR000086; KEGG: aae:aq_1449 8-oxo-dGTPase domain-containing protein; PFAM: NUDIX hydrolase; SPTR: A8URY1 8-OXO-dGTPase domain (MutT domain); PFAM: NUDIX domain
YP_005512260.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: aae:aq_477 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: O66774 Putative uncharacterized protein; PFAM: Rhodanese-like domain
YP_005512261.1	KEGG: aae:aq_1501 hypothetical protein; SPTR: Q05KD2 Putative uncharacterized protein
YP_005512262.1	COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005479:IPR016185:IPR011054:IPR013817:IPR 013816:IPR011761:IPR011764:IPR005481:IPR005482; KEGG: aae:aq_1470 biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: Q05KD3 Pyruvate carboxylase small subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase
YP_005512263.1	COGs: COG2703 Hemerythrin; InterPro IPR012827:IPR012312:IPR016131; KEGG: aae:aq_1719 hypothetical protein; SPTR: Q05KD4 Putative uncharacterized protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain
YP_005512264.1	InterPro IPR018449; KEGG: hya:HY04AAS1_0398 iron-sulfur cluster-binding protein; PFAM: NIL domain; SPTR: A8UVC9 Putative uncharacterized protein; PFAM: NIL domain
YP_005512265.1	COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR006283:IPR016188:IPR010918:IPR000728; KEGG: aae:aq_2119 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; PRIAM: Thiamine-phosphate kinase; SPTR: O67883 Thiamine monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase
YP_005512266.1	COGs: COG0691 tmRNA-binding protein; InterPro IPR020081:IPR000037; KEGG: aae:aq_287 SsrA-binding protein; PFAM: SmpB protein; SPTR: A8UXX1 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_005512267.1	COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143:IPR002829:IPR003704; KEGG: aae:aq_1638 lipoate-protein ligase A; PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; biotin/lipoate A/B protein ligase; protein of unknown function DUF116; SPTR: A8UTN3 Lipoate-protein ligase A; PFAM: Protein of unknown function DUF116; CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase
YP_005512268.1	COGs: COG0170 Dolichol kinase; InterPro IPR000374; KEGG: aae:aq_1542 hypothetical protein; PFAM: phosphatidate cytidylyltransferase; SPTR: A8UY83 Putative uncharacterized protein; PFAM: Cytidylyltransferase family
YP_005512269.1	KEGG: dma:DMR_37990 hypothetical protein; SPTR: D1C8G1 Glycoside hydrolase family 13 domain protein
YP_005512270.1	InterPro IPR010095; KEGG: chy:CHY_0928 ISChy5, transposase; PFAM: transposase IS605 OrfB; SPTR: Q3ADK9 ISChy5, transposase; TIGRFAM: transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain
YP_005512271.1	COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: aae:aq_1871 peptide maturation; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: O67719 Peptide maturation; PFAM: Putative modulator of DNA gyrase
YP_005512272.1	KEGG: hya:HY04AAS1_1029 hypothetical protein; SPTR: A8URZ4 Putative uncharacterized protein
YP_005512273.1	InterPro IPR011006; KEGG: aae:aq_1873 hypothetical protein; SPTR: O67720 Uncharacterized protein aq_1873
YP_005512274.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: aae:aq_1441 extracellular solute binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: A8UUN3 Transporter (Extracellular solute binding protein family 5); PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005512275.1	COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821:IPR016040:IPR013512:IPR013644; KEGG: aae:aq_404 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: A8UQZ9 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_005512276.1	COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR000644:IPR004800:IPR001347; KEGG: aae:aq_1546 polysialic acid capsule expression protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein; SPTR: A8UV73 Polysialic acid capsule expression protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein
YP_005512277.1	COGs: COG0221 Inorganic pyrophosphatase; InterPro IPR008162; KEGG: aae:aq_1547 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: A8UV74 Inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase
YP_005512278.1	COGs: COG2322 membrane protein; InterPro IPR007352; KEGG: aae:aq_156 hypothetical protein; PFAM: protein of unknown function DUF420; SPTR: O66546 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF420)
YP_005512279.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: aae:aq_1418 FUR family transcriptional regulator; PFAM: ferric-uptake regulator; SPTR: A8USI1 Transcriptional regulator (FurR family) protein; PFAM: Ferric uptake regulator family
YP_005512280.1	COGs: COG2189 Adenine specific DNA methylase Mod; InterPro IPR002052:IPR002295:IPR002941; KEGG: fno:Fnod_0500 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: A7HKD1 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase
YP_005512281.1	InterPro IPR002345:IPR014001:IPR014021:IPR006935; KEGG: fno:Fnod_0501 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; SPTR: A8UX39 Type III restriction enzyme R protein; PFAM: Type III restriction enzyme, res subunit
YP_005512282.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR001431:IPR011249:IPR011237:IPR011765:IPR 007863; KEGG: aae:aq_1271 processing protease; PFAM: peptidase M16 domain protein; SPTR: A8USI3 Processing protease; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005512283.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR011249:IPR011237:IPR011765:IPR007863; KEGG: aae:aq_2204 processing protease; PFAM: peptidase M16 domain protein; SPTR: O67945 Processing protease; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005512284.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001808:IPR018490:IPR014710:IPR011991:IPR 012318:IPR000595; KEGG: chl:Chy400_1399 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; SPTR: B9LC23 Transcriptional regulator, Crp/Fnr family; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_005512285.1	COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR002695:IPR013982:IPR011607; KEGG: aae:aq_1963 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: O67775 Bifunctional purine biosynthesis protein purH; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_005512286.1	COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: aae:aq_1254 hypothetical protein; PFAM: YajC family protein; SPTR: A8UYA4 Elongation factor Ts; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit
YP_005512287.1	COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR000438:IPR011762:IPR000022; KEGG: aae:aq_445 acetyl-CoA carboxyltransferase beta subunit; PFAM: carboxyl transferase; SPTR: A8UWU6 Acetyl-CoA carboxyltransferase beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_005512288.1	COGs: COG1354 conserved hypothetical protein; InterPro IPR003768; KEGG: aae:aq_423 hypothetical protein; PFAM: chromosome segregation and condensation protein ScpA; SPTR: A8USC1 Putative uncharacterized protein; PFAM: ScpA/B protein
YP_005512289.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: aae:aq_338 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: A8UUG0 Putative uncharacterized protein; PFAM: ubiE/COQ5 methyltransferase family
YP_005512290.1	COGs: COG0211 Ribosomal protein L27; InterPro IPR018261:IPR001684; KEGG: hya:HY04AAS1_0110 50S ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: A8USS4 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_005512291.1	COGs: COG0261 Ribosomal protein L21; InterPro IPR018258:IPR001787; KEGG: aae:aq_1641a ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: A8USS3 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_005512292.1	KEGG: hypothetical protein; SPTR: C3YL84 Putative uncharacterized protein
YP_005512293.1	KEGG: aae:aq_805 hypothetical protein; SPTR: O66989 Uncharacterized protein aq_805
YP_005512294.1	COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR008927:IPR016040:IPR013023:IPR013116:IPR 000506; KEGG: aae:aq_1245 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; PRIAM: Ketol-acid reductoisomerase; SPTR: A8UVK7 Ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_005512295.1	COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: aae:aq_1244 hypothetical protein; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: A8UVK6 Selenocysteine synthase; PFAM: CDP-alcohol phosphatidyltransferase
YP_005512296.1	COGs: COG1985 Pyrimidine reductase riboflavin biosynthesis; InterPro IPR011549:IPR006401:IPR002734; KEGG: aae:aq_436 riboflavin specific deaminase; PFAM: bifunctional deaminase-reductase domain protein; PRIAM: 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: O66747 Riboflavin specific deaminase; TIGRFAM:2,5-diamino-6-hydroxy-4-(5-phosphoribosylam ino)pyrimidine1-reductase; PFAM: RibD C-terminal domain; TIGRFAM: riboflavin-specific deaminase C-terminal domain; 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal
YP_005512297.1	KEGG: tcx:Tcr_2172 hypothetical protein; SPTR: Q31DL3 Putative uncharacterized protein
YP_005512298.1	COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR013785:IPR004136; KEGG: hya:HY04AAS1_0091 2-nitropropane dioxygenase NPD; PFAM: 2-nitropropane dioxygenase NPD; SPTR: A8UXT9 Polynucleotide phosphorylase/polyadenylase; PFAM: 2-nitropropane dioxygenase
YP_005512299.1	KEGG: pmx:PERMA_1409 hypothetical protein; SPTR: A8URG7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2905)
YP_005512300.1	COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation; InterPro IPR020595:IPR013027:IPR016040:IPR004417:IPR 002218; KEGG: aae:aq_691 tRNA (uracil-5-)-methyltransferase Gid; PFAM: glucose-inhibited division protein A; PRIAM:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase(FADH(2)-oxidizing); SPTR: O66913 Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO; TIGRFAM: gid protein; PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase
YP_005512301.1	COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412:IPR013525; KEGG: ecm:EcSMS35_2268 O-antigen export system permease protein RfbA; PFAM: ABC-2 type transporter; SPTR: Q48478 O-antigen export system permease protein rfbA; PFAM: ABC-2 type transporter
YP_005512302.1	COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ecm:EcSMS35_2267 O-antigen export system ATP-binding protein RfbB; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q48479 O-antigen export system ATP-binding protein rfbB; PFAM: ABC transporter
YP_005512303.1	COGs: COG0341 Preprotein translocase subunit SecF; InterPro IPR003335:IPR005665; KEGG: aae:aq_1602 protein-export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: O67536 Protein-export membrane protein secF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_005512304.1	KEGG: pmx:PERMA_0524 hypothetical protein; SPTR: C0QUE8 Putative uncharacterized protein
YP_005512305.1	COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterPro IPR002311:IPR015944:IPR006194; KEGG: aae:aq_2141 glycyl-tRNA synthetase beta subunit; PFAM: glycyl-tRNA synthetase beta subunit; PRIAM: Glycine--tRNA ligase; SPTR: A8UY22 Phosphoenolpyruvate synthase; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit
YP_005512306.1	COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR018274:IPR000121:IPR015813:IPR008279:IPR 013815:IPR006319:IPR002192; KEGG: aae:aq_2142 phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; SPTR: O67899 Phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase
YP_005512307.1	KEGG: aae:aq_2144 hypothetical protein; SPTR: A8UY19 Putative uncharacterized protein; PFAM: Competence protein A
YP_005512308.1	KEGG: saf:SULAZ_0674 fimbrial assembly protein (PilN); SPTR: A8UY18 Putative uncharacterized protein; PFAM: B-cell receptor-associated protein 31-like
YP_005512309.1	KEGG: sul:SYO3AOP1_1679 hypothetical protein; SPTR: A8UY17 Putative uncharacterized protein (Fragment); PFAM: Pilus assembly protein, PilO
YP_005512310.1	KEGG: saf:SULAZ_0676 hypothetical protein; SPTR: A8V1V4 Putative uncharacterized protein
YP_005512311.1	COGs: COG4796 Type II secretory pathway component HofQ; InterPro IPR001775:IPR004846; KEGG: aae:aq_585 hypothetical protein; PFAM: type II and III secretion system protein; SPTR: A8UYL2 Putative uncharacterized protein; PFAM: Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ
YP_005512312.1	KEGG: sul:SYO3AOP1_1003 hypothetical protein; SPTR: B2V9J9 Putative uncharacterized protein
YP_005512313.1	InterPro IPR002797; KEGG: tye:THEYE_A0578 hypothetical protein; PFAM: polysaccharide biosynthesis protein; SPTR: B5YJK6 Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein
YP_005512314.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sul:SYO3AOP1_1005 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B2V9K1 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_005512315.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sul:SYO3AOP1_1006 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: B2V9K2 Methyltransferase type 11; PFAM: Methyltransferase domain
YP_005512316.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: saf:SULAZ_1001 dolichol-phosphate mannosyltransferase (dolichol-phosphate mannose synthase) (dolichyl-phosphate beta-D-mannosyltransferase) (mannose-P-dolichol synthase) (MPD synthase) (DPMsynthase); PFAM: glycosyl transferase family 2; SPTR: C1DV37 Dolichol-phosphate mannosyltransferase (Dolichol-phosphate mannose synthase) (Dolichyl-phosphate beta-D-mannosyltransferase) (Mannose-P-dolichol synthase) (MPD synthase) (DPMsynthase); PFAM: Glycosyl transferase family 2
YP_005512317.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: saf:SULAZ_1002 glycosyltransferase, family 4; PFAM: glycosyl transferase group 1; SPTR: C1DV38 Glycosyltransferase, family 4; PFAM: Glycosyl transferases group 1
YP_005512318.1	KEGG: tye:THEYE_A0413 hypothetical protein; SPTR: B5YJ45 Putative uncharacterized protein
YP_005512319.1	KEGG: tye:THEYE_A0414 hypothetical protein; SPTR: B5YJ46 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723)
YP_005512320.1	InterPro IPR001120:IPR012902; KEGG: saf:SULAZ_1005 prepilin; SPTR: C1DV41 Prepilin; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005512321.1	InterPro IPR001120:IPR012902; KEGG: sul:SYO3AOP1_1012 fimbrial protein; SPTR: B2V9K8 Fimbrial protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005512322.1	KEGG: min:Minf_0151 hypothetical protein; SPTR: B3DXH7 Putative uncharacterized protein
YP_005512323.1	KEGG: mse:Msed_1031 hypothetical protein; SPTR: A4YFJ4 Putative uncharacterized protein
YP_005512324.1	KEGG: kcr:Kcr_0723 hypothetical protein; SPTR: B1L4U4 Putative uncharacterized protein
YP_005512325.1	COGs: COG0316 conserved hypothetical protein; InterPro IPR017870:IPR000361:IPR016092; KEGG: aae:aq_1857 hypothetical protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: O67709 Protein aq_1857; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein
YP_005512326.1	KEGG: hya:HY04AAS1_0551 hypothetical protein; SPTR: A8UYF2 Putative uncharacterized protein
YP_005512327.1	COGs: COG1624 conserved hypothetical protein; InterPro IPR014046:IPR003390; KEGG: aae:aq_1467 hypothetical protein; PFAM: protein of unknown function DUF147; SPTR: A8UYF0 Putative uncharacterized protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: conserved hypothetical protein TIGR00159
YP_005512328.1	COGs: COG0294 Dihydropteroate synthase; InterPro IPR000489:IPR011005:IPR006390; KEGG: aae:aq_1468 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: O67448 Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_005512329.1	COGs: COG0338 Site-specific DNA methylase; InterPro IPR002052:IPR002294:IPR012326:IPR012327; KEGG: gtn:GTNG_2051 putative adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: A8UWH2 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam)
YP_005512330.1	InterPro IPR011335; KEGG: vpa:VP0518 DNA mismatch repair protein; SPTR: Q87SA6 DNA mismatch repair protein mutH
YP_005512331.1	InterPro IPR011335; KEGG: avi:Avi_7309 polyketide synthase; SPTR: B9K536 Polyketide synthase
YP_005512333.1	COGs: COG0125 Thymidylate kinase; InterPro IPR018095:IPR018094:IPR000062; KEGG: aae:aq_969 thymidylate kinase; PFAM: thymidylate kinase; PRIAM: dTMP kinase; SPTR: O67099 Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_005512334.1	COGs: COG1225 Peroxiredoxin; InterPro IPR012336:IPR012335:IPR017936:IPR000866; KEGG: hya:HY04AAS1_1406 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A8USL2 Putative uncharacterized protein; PFAM: AhpC/TSA family
YP_005512335.1	COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR011857:IPR001347:IPR019490; KEGG: aae:aq_750 bifunctional phosphoglucose/phosphomannose isomerase; PFAM: Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase-like; sugar isomerase (SIS); SPTR: O66954 Bifunctional phosphoglucose/phosphomannose isomerase; TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase; PFAM: Bacterial phospho-glucose isomerase C-terminal region; SIS domain; TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase
YP_005512336.1	COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: ttr:Tter_2416 integral membrane protein TerC; PFAM: Integral membrane protein TerC; SPTR: D1CHU0 Integral membrane protein TerC; PFAM: Integral membrane protein TerC family
YP_005512337.1	COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003538:IPR006260; KEGG: aae:aq_531 hypothetical protein; PFAM: Gram-negative tonB protein; SPTR: A8URK1 TonB protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_005512338.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: aae:aq_1839 biopolymer transport ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8URK0 Biopolymer transport ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2
YP_005512339.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR014172:IPR002898; KEGG: ppd:Ppro_1465 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8URJ9 TolQ protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB, group 2
YP_005512340.1	InterPro IPR013055; KEGG: cbu:CBU_1950 hypothetical membrane spanning protein; SPTR: A8USV3 Putative uncharacterized protein
YP_005512341.1	COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336:IPR012335; KEGG: sul:SYO3AOP1_0029 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: B2V6E8 NADH dehydrogenase (Ubiquinone) 24 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_005512342.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR001949:IPR012336:IPR011538:IPR019554:IPR 019575; KEGG: sul:SYO3AOP1_0030 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: B2V6E9 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_005512343.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR017900:IPR006655:IPR009010:IPR001041:IPR 006478:IPR017896:IPR019574:IPR001450:IPR006963:IPR006656:I PR006657; KEGG: min:Minf_1229 NAD-dependent formate dehydrogenase alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molydopterin dinucleotide-binding region; SPTR: A9QPG6 NAD-dependent formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type
YP_005512344.1	KEGG: min:Minf_1228 NAD-dependent formate dehydrogenase delta subunit; SPTR: A9QPG7 NAD-dependent formate dehydrogenase delta subunit; PFAM: NADH-dependant formate dehydrogenase delta subunit FdsD
YP_005512345.1	COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; InterPro IPR003786; KEGG: cyp:PCC8801_0758 formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; SPTR: B7JYH1 Formate dehydrogenase family accessory protein FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_005512346.1	COGs: COG0292 Ribosomal protein L20; InterPro IPR005813; KEGG: aae:aq_952 50S ribosomal protein L20; PFAM: ribosomal protein L20; SPTR: A8UUG2 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_005512347.1	COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterPro IPR010978:IPR004529:IPR006195:IPR004188:IPR 002319; KEGG: aae:aq_953 phenylalanyl-tRNA synthetase alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; SPTR: O67087 Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_005512348.1	InterPro IPR016196; KEGG: saf:SULAZ_0077 transporter, major facilitator family; SPTR: C1DXG1 Transporter, major facilitator family
YP_005512349.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR009082:IPR003661:IPR005467; KEGG: hya:HY04AAS1_0804 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: B6FQP5 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005512350.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR016032:IPR001789:IPR001867; KEGG: hya:HY04AAS1_0381 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B4U7G0 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005512351.1	KEGG: coc:Coch_0868 putative phage repressor; SPTR: A6EDE3 Cardiolipin synthetase
YP_005512352.1	KEGG: eck:EC55989_0378 putative flagellin structural protein; putative exported protein; SPTR: B7L524 Putative flagellin structural protein; putative exported protein
YP_005512353.1	COGs: COG3696 Putative silver efflux pump; InterPro IPR001036; KEGG: sul:SYO3AOP1_1612 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: B2V6D7 Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_005512354.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143:IPR000089; KEGG: sul:SYO3AOP1_1613 efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: B2V6D8 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005512355.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sul:SYO3AOP1_1614 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: B2V6D9 Outer membrane efflux protein; PFAM: Outer membrane efflux protein
YP_005512356.1	COGs: COG1313 Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating protein; InterPro IPR016431:IPR007197; KEGG: aae:aq_729 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: O66941 Putative uncharacterized protein; PFAM: Radical SAM superfamily
YP_005512357.1	KEGG: DNA-directed RNA polymerase 3 largest subunit; K03018 DNA-directed RNA polymerase III subunit C1; SPTR: A8UTS4 Putative uncharacterized protein
YP_005512358.1	COGs: COG0605 Superoxide dismutase; InterPro IPR001189:IPR019832:IPR019831; KEGG: hya:HY04AAS1_0075 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; SPTR: A5PF69 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain
YP_005512359.1	COGs: COG3748 membrane protein; InterPro IPR010389; KEGG: mca:MCA2966 hypothetical protein; PFAM: protein of unknown function DUF989; SPTR: B6AKS0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF989)
YP_005512360.1	COGs: COG2847 conserved hypothetical protein; InterPro IPR007410; KEGG: pmx:PERMA_1264 periplasmiC protein conserved in bacteria with histidine; PFAM: protein of unknown function DUF461; SPTR: A8UUH5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF461)
YP_005512361.1	COGs: COG1837 RNA-binding protein (contains KH domain); InterPro IPR009019:IPR004088; KEGG: aae:aq_124a hypothetical protein; SPTR: O66524 UPF0109 protein aq_124
YP_005512362.1	COGs: COG0228 Ribosomal protein S16; InterPro IPR020592:IPR000307; KEGG: aae:aq_123 ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: A8UQV6 Ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_005512363.1	COGs: COG2217 Cation transport ATPase; InterPro IPR018303:IPR017969:IPR001757:IPR001756:IPR 006121:IPR006403:IPR006416:IPR008250:IPR005834; KEGG: aae:aq_1445 cation transporter E1-E2 family ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: A8URU1 Cation transporting ATPase (E1-E2 family) protein; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005512364.1	COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR018204:IPR011060:IPR013785:IPR002028:IPR 000489; KEGG: aae:aq_1548 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain; PRIAM: Tryptophan synthase; SPTR: O67502 Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_005512365.1	COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718:IPR015946; KEGG: aae:aq_1549 hypothetical protein; PFAM: OsmC family protein; SPTR: A8UUR6 Putative uncharacterized protein; PFAM: OsmC-like protein
YP_005512366.1	COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249:IPR011053:IPR000089; KEGG: aae:aq_1363 biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: O67375 Biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_005512367.1	COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterPro IPR013852:IPR020599:IPR016027:IPR008991:IPR 014722:IPR012340:IPR011768:IPR013185:IPR001059:IPR015365; KEGG: aae:aq_1364 elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW domain protein; Elongation factor P/YeiP protein; SPTR: A8UTB0 Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_005512368.1	COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: aae:aq_2196 hypothetical protein; PFAM: protein of unknown function DUF62; SPTR: A8UQR2 Putative uncharacterized protein; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase
YP_005512369.1	InterPro IPR001315; KEGG: tte:TTE1841 hypothetical protein; SPTR: Q8R8Z1 Putative uncharacterized protein
YP_005512370.1	COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR005673:IPR006059; KEGG: sul:SYO3AOP1_0741 phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: B2V8V1 Phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein
YP_005512371.1	COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR011864:IPR000515; KEGG: saf:SULAZ_1290 phosphate ABC transporter, permease protein PstC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1DVX2 Phosphate ABC transporter, permease protein PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC
YP_005512372.1	COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR005672:IPR000515; KEGG: saf:SULAZ_1289 phosphate ABC transporter, permease protein PstA; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1DVX1 Phosphate ABC transporter, permease protein PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_005512373.1	COGs: COG1117 ABC-type phosphate transport system ATPase component; InterPro IPR017871:IPR003593:IPR005670:IPR003439:IPR 015850; KEGG: saf:SULAZ_1288 phosphate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1DVX0 Phosphate ABC transporter, ATP-binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_005512374.1	COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: aae:aq_1480 hypothetical protein; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: O67456 Uncharacterized protein aq_1480; PFAM: CDP-alcohol phosphatidyltransferase
YP_005512375.1	KEGG: hya:HY04AAS1_0335 hypothetical protein; SPTR: B4U7B4 Putative uncharacterized protein; PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone
YP_005512376.1	InterPro IPR019020; KEGG: hya:HY04AAS1_0336 hypothetical protein; PFAM: Cytochrome c-552/DMSO reductase-like, haem-binding domain; SPTR: B4U7B5 Putative uncharacterized protein; PFAM: Ethylbenzene dehydrogenase; TIGRFAM: DMSO reductase family type II enzyme, heme b subunit
YP_005512377.1	COGs: COG1140 Nitrate reductase beta subunit; InterPro IPR017896; KEGG: hya:HY04AAS1_0337 selenate reductase; SPTR: B4U7B6 Selenate reductase
YP_005512378.1	COGs: COG5013 Nitrate reductase alpha subunit; InterPro IPR009010:IPR006311:IPR017909:IPR006656:IPR 006657; KEGG: hya:HY04AAS1_0338 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: B4U7B7 Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase
YP_005512379.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439:IPR015854; KEGG: aae:aq_297 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8UWB2 ABC transporter; PFAM: ABC transporter
YP_005512380.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sul:SYO3AOP1_0832 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: B2V942 Putative uncharacterized protein; PFAM: Predicted permease
YP_005512381.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: sul:SYO3AOP1_0831 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: B2V941 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005512382.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: aae:aq_362 hypothetical protein; PFAM: glycosyl transferase family 9; SPTR: A8UU48 Diaminopimelate epimerase; PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_005512383.1	COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR005855:IPR017932:IPR000583:IPR001347; KEGG: aae:aq_301 glucosamine--fructose-6-phosphate aminotransferase; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); SPTR: O66648 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_005512384.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: aae:aq_695 AcrB/AcrD/AcrF family cation efflux protein; PFAM: acriflavin resistance protein; SPTR: A8UUC2 Cation efflux system (AcrB/AcrD/AcrF family) protein; PFAM: AcrB/AcrD/AcrF family
YP_005512385.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: aae:aq_698 acriflavin resistance protein AcrE; PFAM: secretion protein HlyD family protein; SPTR: O66917 Acriflavin resistance protein AcrE; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005512386.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: aae:aq_699 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: O66918 Putative uncharacterized protein; PFAM: Outer membrane efflux protein
YP_005512387.1	KEGG: aae:aq_820 hypothetical protein; SPTR: A8UY81 Putative uncharacterized protein
YP_005512388.1	COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR013221:IPR004101:IPR005863:IPR000713; KEGG: aae:aq_821 UDP-MurNAc-pentapeptide sythetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: A8UY80 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-d iaminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_005512389.1	COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR001986:IPR016228:IPR013792:IPR006264; KEGG: aae:aq_1536 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: A8UT19 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_005512390.1	InterPro IPR007418; KEGG: pmx:PERMA_0320 hypothetical protein; PFAM: protein of unknown function DUF474; SPTR: C0QTU8 Putative uncharacterized protein; PFAM: Copper resistance protein D
YP_005512391.1	COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR007085:IPR003382:IPR005252; KEGG: aae:aq_815 pantothenate metabolism flavoprotein; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: Q75VX0 Putative pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_005512392.1	COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023:IPR006549:IPR005834; KEGG: aae:aq_2171 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; PRIAM: 3-deoxy-manno-octulosonate-8-phosphatase; SPTR: Q75VW9 Putative uncharacterized protein; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA
YP_005512393.1	COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterPro IPR013816:IPR016102:IPR013650; KEGG: hya:HY04AAS1_1267 succinate--CoA ligase (ADP-forming); PFAM: ATP-grasp domain protein; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Q75VW8 Citryl-CoA synthetase large subunit; PFAM: ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit
YP_005512394.1	COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR001989:IPR012840:IPR007197; KEGG: pmx:PERMA_0296 anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; SPTR: Q64AP5 Pyruvate-formate lyase-activating enzyme; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein
YP_005512395.1	COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR005144; KEGG: cts:Ctha_0685 anaerobic ribonucleoside triphosphate reductase; SPTR: Q64A13 Oxygen-sensitive ribonucleoside-triphosphate reductase; PFAM: ATP cone domain
YP_005512396.1	COGs: COG3302 DMSO reductase anchor subunit; InterPro IPR007059; KEGG: aae:aq_1231 DMSO reductase chain C; PFAM: DMSO reductase anchor subunit (DmsC); SPTR: O67278 DMSO reductase chain C; PFAM: DMSO reductase anchor subunit (DmsC)
YP_005512397.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017900:IPR017896:IPR001450; KEGG: aae:aq_1232 DMSO reductase chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8UWU2 DMSO reductase chain B
YP_005512398.1	InterPro IPR010094:IPR010095; KEGG: saf:SULAZ_1198 transposase, OrfB family; PFAM: transposase IS605 OrfB; SPTR: C1DVN2 Transposase, OrfB family; TIGRFAM: transposase ; transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain
YP_005512399.1	KEGG: dps:DP1896 methyl-accepting chemotaxis protein (TlpB); SPTR: C6PST3 Methyl-accepting chemotaxis sensory transducer
YP_005512400.1	COGs: COG4636 conserved hypothetical protein; InterPro IPR012296:IPR008538; KEGG: mta:Moth_2061 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: C4FKA3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820)
YP_005512401.1	COGs: COG4636 conserved hypothetical protein; InterPro IPR012296:IPR008538; KEGG: mta:Moth_1166 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: C4FKA3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820)
YP_005512402.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006655:IPR009010:IPR006963:IPR006656:IPR 006657; KEGG: aae:aq_1234 DMSO reductase chain A; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: A8UWU3 DMSO reductase chain A; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_005512403.1	COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042:IPR011777:IPR006076; KEGG: aae:aq_121 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: A8UYA2 Putative uncharacterized protein; TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; TIGRFAM: geranylgeranyl reductase family
YP_005512404.1	COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119:IPR010992; KEGG: aae:aq_2174 integration host factor beta subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: O67923 Integration host factor beta subunit; PFAM: Bacterial DNA-binding protein
YP_005512405.1	COGs: COG1934 conserved hypothetical protein; InterPro IPR014340:IPR005653; KEGG: aae:aq_2173 hypothetical protein; PFAM: OstA family protein; SPTR: O67922 Putative uncharacterized protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA
YP_005512406.1	KEGG: aae:aq_2172 hypothetical protein; SPTR: A8UY98 Putative uncharacterized protein
YP_005512407.1	COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR006130:IPR002082:IPR006132:IPR006131; KEGG: aae:aq_409 aspartate carbamoyltransferase catalytic chain; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; SPTR: A8UVP9 Bifunctional GMP synthase/glutamine amidotransferase protein; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_005512408.1	COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; InterPro IPR020555:IPR003526; KEGG: aae:aq_957 hypothetical protein; PFAM: MECDP-synthase; PRIAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; SPTR: A8UU41 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_005512409.1	COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR016035:IPR002641; KEGG: aae:aq_1386 hypothetical protein; PFAM: Patatin; SPTR: A8UU42 Translation-associated GTPase; PFAM: Patatin-like phospholipase
YP_005512410.1	COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: aae:aq_128 hypothetical protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: A8UWD0 Putative uncharacterized protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005512411.1	KEGG: sul:SYO3AOP1_0908 hypothetical protein; SPTR: A8UXG9 Putative uncharacterized protein
YP_005512412.1	InterPro IPR007329; KEGG: sul:SYO3AOP1_0907 FMN-binding domain protein; PFAM: FMN-binding domain protein; SPTR: A8UXG8 Putative uncharacterized protein; PFAM: FMN-binding domain
YP_005512413.1	KEGG: sul:SYO3AOP1_0906 hypothetical protein; SPTR: B2V9B1 Putative uncharacterized protein
YP_005512414.1	KEGG: sul:SYO3AOP1_0905 hypothetical protein; SPTR: B2V9B0 Putative uncharacterized protein
YP_005512415.1	COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: sul:SYO3AOP1_0608 NAD(P)H dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone); SPTR: B2V8H2 NAD(P)H dehydrogenase (Quinone); PFAM: Flavodoxin-like fold
YP_005512416.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: aae:aq_262 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: O66620 Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_005512417.1	KEGG: bgl:bglu_2p0880 hypothetical protein; SPTR: A8USV3 Putative uncharacterized protein
YP_005512418.1	KEGG: hya:HY04AAS1_1508 hypothetical protein; SPTR: B4U601 Putative uncharacterized protein
YP_005512420.1	InterPro IPR006622:IPR018967; KEGG: hya:HY04AAS1_1509 zinc finger CDGSH-type domain protein; PFAM: Iron sulphur domain-containing, CDGSH-type; SMART: zinc finger CDGSH-type domain protein; SPTR: A8UU78 Putative uncharacterized protein; PFAM: Iron-binding zinc finger CDGSH type
YP_005512421.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: saf:SULAZ_1267 transcriptional regulator; PFAM: helix-turn-helix HxlR type; SPTR: A8UU79 Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix
YP_005512422.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001808:IPR018490:IPR014710:IPR011991:IPR 000595:IPR012318; KEGG: aae:aq_490 Crp family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; SPTR: A8UTJ5 Transcriptional regulator (Crp/Fnr family) protein; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_005512423.1	COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000937; KEGG: aae:aq_492 hypothetical protein; SPTR: A8UTJ6 Putative uncharacterized protein; PFAM: Thermophilic metalloprotease (M29)
YP_005512424.1	COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR005693:IPR003399; KEGG: hya:HY04AAS1_0838 virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; SPTR: A8UTJ7 Putative uncharacterized protein; TIGRFAM: virulence factor Mce family protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005512425.1	InterPro IPR002173; KEGG: sul:SYO3AOP1_0959 hypothetical protein; SPTR: B2V9F9 Conserved hypothetical membrane protein
YP_005512426.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR005074; KEGG: saf:SULAZ_0561 peptidase, C39 family; PFAM: peptidase C39 bacteriocin processing; SPTR: C1DTW4 Peptidase, C39 family; PFAM: Peptidase C39 family
YP_005512427.1	COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR018236:IPR013816:IPR001636; KEGG: pmx:PERMA_0523 phosphoribosylaminoimidazolesuccinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: A8UQQ3 Phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_005512428.1	COGs: COG2067 Long-chain fatty acid transport protein; InterPro IPR005017; KEGG: pmx:PERMA_0666 membrane protein involved in aromatic hydrocarbon degradation; PFAM: membrane protein involved in aromatic hydrocarbon degradation; SPTR: C0QP59 Membrane protein involved in aromatic hydrocarbon degradation; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX)
YP_005512429.1	COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: aae:aq_716 hypothetical protein; PFAM: transposase IS605 OrfB; SPTR: A8US90 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_005512430.1	COGs: COG1424 Pimeloyl-CoA synthetase; InterPro IPR005499; KEGG: aae:aq_1659 6-carboxyhexanoate--CoA ligase; PFAM: 6-carboxyhexanoate--CoA ligase; PRIAM: 6-carboxyhexanoate--CoA ligase; SPTR: A8UXE0 6-carboxyhexanoate--CoA ligase; TIGRFAM: 6-carboxyhexanoate/CoA ligase; PFAM: 6-carboxyhexanoate--CoA ligase; TIGRFAM: 6-carboxyhexanoate--CoA ligase
YP_005512431.1	COGs: COG0606 ATPase with chaperone activity; InterPro IPR001208:IPR020568:IPR003593:IPR004482:IPR 000523; KEGG: aae:aq_291 hypothetical protein; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: A8UTX1 Putative uncharacterized protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_005512432.1	COGs: COG0253 Diaminopimelate epimerase; InterPro IPR018510:IPR001653; KEGG: aae:aq_1838 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; SPTR: O67693 Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase
YP_005512433.1	COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR011991; KEGG: hya:HY04AAS1_0576 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: B4U802 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_005512434.1	COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: aae:aq_685 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: O66910 Arsenate reductase; PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin)
YP_005512435.1	InterPro IPR012336:IPR012335; KEGG: sul:SYO3AOP1_0935 glutaredoxin family protein; SPTR: C4FKQ6 Glutaredoxin family protein; TIGRFAM: small redox-active disulfide protein 2
YP_005512436.1	COGs: COG0701 permease; InterPro IPR005524; KEGG: aae:aq_1388 hypothetical protein; PFAM: permease; SPTR: O67395 Putative uncharacterized protein; PFAM: Predicted permease
YP_005512437.1	COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR000802; KEGG: saf:SULAZ_0803 arsenic efflux pump; PFAM: Arsenical pump membrane protein; SPTR: C1DUJ6 Arsenic efflux pump; PFAM: Arsenical pump membrane protein
YP_005512438.1	KEGG: hya:HY04AAS1_0120 ATP synthase protein I; SPTR: A8UQP9 Putative uncharacterized protein
YP_005512439.1	COGs: COG1416 conserved hypothetical protein; InterPro IPR006311:IPR014865; KEGG: aae:aq_1119 hypothetical protein; PFAM: Domain of unknown function DUF1791; SPTR: A8UUR3 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_005512440.1	InterPro IPR010870; KEGG: aae:aq_1121 hypothetical protein; PFAM: phosphate-selective porin O and P; SPTR: A8UUR4 Putative uncharacterized protein
YP_005512441.1	COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: aae:aq_891 exopolyphosphatase; PFAM: Ppx/GppA phosphatase; SPTR: O67040 Exopolyphosphatase; PFAM: Ppx/GppA phosphatase family
YP_005512442.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: aae:aq_2135 hypothetical protein; SPTR: A8USA9 Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily
YP_005512443.1	COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096:IPR001750; KEGG: aae:aq_1322 NADH dehydrogenase I chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: O67342 NADH dehydrogenase I chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_005512444.1	COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR003918:IPR010227:IPR001750; KEGG: aae:aq_1321 NADH dehydrogenase I chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A8UR05 NADH dehydrogenase I chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_005512445.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003916:IPR018393:IPR003945:IPR001516:IPR 001750; KEGG: aae:aq_1320 NADH dehydrogenase I chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: A8UR06 NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_005512446.1	COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: aae:aq_1319 NADH dehydrogenase I chain K; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: A8UR21 NADH dehydrogenase I chain K; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_005512447.1	COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: aae:aq_1318 NADH dehydrogenase I chain J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: O67338 NADH dehydrogenase I chain J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_005512448.1	COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017900:IPR009051:IPR017896:IPR001450; KEGG: aae:aq_1317 NADH dehydrogenase I chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8UR24 NADH dehydrogenase I chain I; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_005512449.1	COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR001476:IPR011032:IPR020818; KEGG: hya:HY04AAS1_0859 chaperonin Cpn10; PFAM: Chaperonin Cpn10; SPTR: A8URU8 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit
YP_005512450.1	COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR018370:IPR001844:IPR002423; KEGG: aae:aq_2200 GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: A8URU7 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_005512451.1	COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: aae:aq_1249 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: A8USC4 Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family
YP_005512452.1	COGs: COG0020 Undecaprenyl pyrophosphate synthase; InterPro IPR018520:IPR001441; KEGG: aae:aq_1248 hypothetical protein; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: O67291 Undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_005512453.1	COGs: COG1729 conserved hypothetical protein; InterPro IPR011990:IPR019734:IPR013026; KEGG: aae:aq_1247 hypothetical protein; SPTR: O67290 Putative uncharacterized protein; TIGRFAM: tol-pal system protein YbgF
YP_005512454.1	COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR014743:IPR013785:IPR000644; KEGG: pmx:PERMA_1270 chloride channel protein; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; SMART: CBS domain containing protein; SPTR: A8UVV7 tRNA (Uracil-5-)-methyltransferase Gid; PFAM: CBS domain; Voltage gated chloride channel
YP_005512455.1	COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterPro IPR016166:IPR011601:IPR016167:IPR016169:IPR 003170:IPR006094; KEGG: aae:aq_520 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: A8USE9 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_005512456.1	COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR000291:IPR016185:IPR013817:IPR013816:IPR 005905:IPR011761:IPR011127:IPR011095; KEGG: aae:aq_521 D-alanine:D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: A8USE7 D-alanine:D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_005512457.1	InterPro IPR010827; KEGG: hya:HY04AAS1_0136 hypothetical protein; PFAM: surface antigen variable number repeat protein; SPTR: A8USE6 Putative uncharacterized protein
YP_005512458.1	COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR010916:IPR020823:IPR003494; KEGG: hya:HY04AAS1_1412 cell division protein FtsA; PFAM: cell division protein FtsA; SPTR: A8USE5 Cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA
YP_005512459.1	COGs: COG0206 Cell division GTPase; InterPro IPR020805:IPR000158:IPR019746:IPR008280:IPR 003008:IPR018316; KEGG: aae:aq_525 cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: A8USE3 Cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ
YP_005512460.1	KEGG: pho:PH1812 hypothetical protein; SPTR: A8USE2 Putative uncharacterized protein
YP_005512461.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: aae:aq_1133 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: O67208 Putative uncharacterized protein; PFAM: Outer membrane efflux protein
YP_005512462.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: saf:SULAZ_0789 cation efflux system; SPTR: C1DUI2 Cation efflux system; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005512463.1	KEGG: vsa:VSAL_p840_13 conjugal transfer mating pair stabilization protein TraN
YP_005512464.1	KEGG: pmx:PERMA_0048 membrane or secreted protein; SPTR: C0QT31 Membrane or secreted protein
YP_005512465.1	KEGG: sul:SYO3AOP1_1709 hypothetical protein; SPTR: A8UTK8 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2231)
YP_005512466.1	COGs: COG4314 lipoprotein involved in nitrous oxide reduction; InterPro IPR008719; KEGG: saf:SULAZ_0790 hypothetical protein; PFAM: NosL family protein; SPTR: A8UTK7 Putative uncharacterized protein; PFAM: NosL
YP_005512467.1	KEGG: oca:OCAR_4023 hypothetical protein; SPTR: A8UTK6 Putative uncharacterized protein
YP_005512468.1	COGs: COG2217 Cation transport ATPase; InterPro IPR018303:IPR001757:IPR000695:IPR006403:IPR 006416:IPR008250:IPR005834; KEGG: aae:aq_1125 cation transporter E1-E2 family ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: A8UTK5 Cation transporting ATPase (E1-E2 family) protein; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_005512469.1	COGs: COG3696 Putative silver efflux pump; InterPro IPR001036:IPR004763; KEGG: saf:SULAZ_0792 cation efflux system protein CusA; PFAM: acriflavin resistance protein; SPTR: C1DUI4 Cation efflux system protein CusA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_005512470.1	COGs: COG0298 Hydrogenase maturation factor; InterPro IPR001109; KEGG: pmx:PERMA_1010 hydrogenase assembly chaperone HypC/HupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); SPTR: A8USG5 Hydrogenase assembly chaperone hypC/hupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF
YP_005512471.1	COGs: COG0409 Hydrogenase maturation factor; InterPro IPR002780; KEGG: aae:aq_1157 hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; SPTR: A8USG7 Hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD
YP_005512472.1	COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR018376:IPR009188:IPR002376:IPR011034:IPR 005793:IPR001753; KEGG: aae:aq_1156 hydrogenase regulation HoxX; PFAM: formyl transferase domain protein; Enoyl-CoA hydratase/isomerase; SPTR: O67224 Hydrogenase regulation HoxX; PFAM: Enoyl-CoA hydratase/isomerase family; Formyl transferase; Formyl transferase, C-terminal domain
YP_005512473.1	COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR009057:IPR011075:IPR012287; KEGG: aae:aq_321 hypothetical protein; PFAM: regulatory protein TetR; SPTR: A8UUF6 Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family
YP_005512474.1	COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: hya:HY04AAS1_1199 carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; PRIAM: Carboxymethylenebutenolidase; SPTR: B4U9S3 Carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase family
YP_005512475.1	COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: gyc:GYMC61_1403 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: C9RX42 Carbon starvation protein CstA; PFAM: Carbon starvation protein CstA
YP_005512476.1	COGs: COG0040 ATP phosphoribosyltransferase; InterPro IPR018198:IPR013820; KEGG: aae:aq_1613 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: O67543 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase
YP_005512477.1	KEGG: aae:aq_1369 hypothetical protein; SPTR: A8UTD3 Putative uncharacterized protein
YP_005512478.1	COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: aae:aq_1526 hypothetical protein; SPTR: O67486 Putative uncharacterized protein; TIGRFAM: DNA polymerase III, delta' subunit
YP_005512479.1	COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: hya:HY04AAS1_1188 phospholipase D/transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; SPTR: B4U9R2 Phospholipase D/Transphosphatidylase
YP_005512480.1	InterPro IPR003675; KEGG: sul:SYO3AOP1_0580 abortive infection protein; PFAM: Abortive infection protein; SPTR: B2V8E5 Abortive infection protein; PFAM: CAAX amino terminal protease family
YP_005512481.1	KEGG: aae:aq_1286 hypothetical protein; SPTR: A8UVK4 Putative uncharacterized protein; PFAM: General secretion pathway protein K
YP_005512482.1	KEGG: aae:aq_1465 hypothetical protein; SPTR: O67445 Uncharacterized protein aq_1465
YP_005512483.1	KEGG: aae:aq_1843 hypothetical protein; SPTR: A8UUH8 Putative uncharacterized protein
YP_005512484.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR003593:IPR007831; KEGG: aae:aq_1474 general secretion pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: A8UYH2 General secretion pathway protein E; PFAM: Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E
YP_005512485.1	InterPro IPR003660; KEGG: aae:aq_1825 hypothetical protein; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; SPTR: A8USM0 Putative uncharacterized protein; PFAM: HAMP domain; Protein of unknown function (DUF3365)
YP_005512486.1	KEGG: aae:aq_1824 hypothetical protein; SPTR: A8USL9 Putative uncharacterized protein
YP_005512487.1	COGs: COG2229 GTPase; InterPro IPR001806; KEGG: aae:aq_1823 gliding motility protein MglA; SPTR: A8USL8 Gliding motility protein MglA; PFAM: Ras family
YP_005512488.1	InterPro IPR004942; KEGG: aae:aq_1822 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: A8USL7 Putative uncharacterized protein; PFAM: Roadblock/LC7 domain
YP_005512489.1	COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR019798:IPR001085:IPR015424:IPR015421; KEGG: aae:aq_479 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: A8USQ5 Serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_005512490.1	COGs: COG0165 Argininosuccinate lyase; InterPro IPR020557:IPR003031:IPR000362:IPR008948:IPR 009049; KEGG: aae:aq_1372 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: A8UXH0 Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_005512491.1	COGs: COG1913 Zn-dependent protease; InterPro IPR012091:IPR012962; KEGG: aae:aq_459 hypothetical protein; PFAM: peptidase zinc-dependent; SPTR: O66764 Putative uncharacterized protein; PFAM: Peptidase family M54
YP_005512492.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701; KEGG: hya:HY04AAS1_0610 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: A8USR9 Transporter (Major facilitator family) protein; PFAM: Major Facilitator Superfamily
YP_005512493.1	COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR020565:IPR020568:IPR000807; KEGG: aae:aq_039 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: O66455 Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase
YP_005512494.1	COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR008921:IPR005790:IPR010372; KEGG: aae:aq_1104 hypothetical protein; PFAM: DNA polymerase III delta; SPTR: O67189 Uncharacterized protein aq_1104; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_005512495.1	COGs: COG1158 Transcription termination factor; InterPro IPR016027:IPR011112:IPR012340:IPR011129:IPR 003593:IPR004665:IPR011113:IPR000194; KEGG: aae:aq_873 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; SMART: Cold shock protein; AAA ATPase; SPTR: A8UVZ5 Transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho
YP_005512496.1	COGs: COG0486 GTPase; InterPro IPR006073:IPR018948:IPR004520:IPR005225:IPR 002917; KEGG: aae:aq_871 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; SPTR: O67030 tRNA modification GTPase mnmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE
YP_005512497.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838:IPR015424:IPR015421:IPR015422:IPR 004839; KEGG: aae:aq_2094 aminotransferase; PFAM: aminotransferase class I and II; SPTR: O67864 Aminotransferase (AspC family); PFAM: Aminotransferase class I and II
YP_005512498.1	COGs: COG1734 DnaK suppressor protein; InterPro IPR020458:IPR020460:IPR012784:IPR000962; KEGG: aae:aq_2095 DnaK suppressor protein; PFAM: zinc finger DksA/TraR C4-type; SPTR: A8US32 DnaK suppressor protein; TIGRFAM: RNA polymerase-binding protein DksA; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA
YP_005512499.1	COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: aae:aq_1771 uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: O67647 Putative uncharacterized protein; PFAM: Uroporphyrinogen-III synthase HemD
YP_005512500.1	COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; InterPro IPR020568:IPR015870:IPR011334:IPR004463; KEGG: aae:aq_1772 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; SPTR: A8UVV4 UDP-3-0-acyl N-acetylglcosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase
YP_005512501.1	COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR004528:IPR003329; KEGG: aae:aq_692 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: O66914 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase
YP_005512502.1	COGs: COG0450 Peroxiredoxin; InterPro IPR012336:IPR012335:IPR017936:IPR000866; KEGG: aae:aq_486 alkyl hydroperoxide reductase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A8URS8 Alkyl hydroperoxide reductase; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin
YP_005512503.1	COGs: COG0492 Thioredoxin reductase; InterPro IPR000103:IPR013027:IPR005982; KEGG: hya:HY04AAS1_1451 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8URS7 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_005512504.1	InterPro IPR019270; KEGG: gvi:gsr0563 hypothetical protein; PFAM: Protein of unknown function DUF2283; SPTR: Q7NN51 Gsr0563 protein; PFAM: Protein of unknown function (DUF2283)
YP_005512505.1	KEGG: syp:SYNPCC7002_C0015 hypothetical protein; SPTR: Q4CA65 Putative uncharacterized protein
YP_005512506.1	COGs: COG1832 CoA-binding protein; InterPro IPR016040:IPR003781; KEGG: aae:aq_1869 hypothetical protein; PFAM: CoA-binding domain protein; SPTR: A8UUW7 Putative uncharacterized protein; PFAM: CoA binding domain
YP_005512507.1	COGs: COG0263 Glutamate 5-kinase; InterPro IPR001048:IPR019797:IPR005715:IPR001057:IPR 002478:IPR015947:IPR011529; KEGG: aae:aq_1134 gamma-glutamyl kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein; SPTR: A8UXF0 Gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase; uncharacterized domain 2
YP_005512508.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR018130:IPR011032:IPR016040:IPR013154:IPR 013149; KEGG: aae:aq_1362 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: O67374 Alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005512509.1	COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR002318:IPR018164:IPR018162:IPR018163:IPR 018165:IPR012947:IPR003156; KEGG: aae:aq_1293 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; SPTR: A8UQV1 Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanyl-tRNA synthetase
YP_005512510.1	COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: aae:aq_873a ribosomal protein L31; PFAM: ribosomal protein L31; SPTR: P58413 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_005512511.1	COGs: COG0216 Protein chain release factor A; InterPro IPR000352:IPR004373:IPR005139; KEGG: aae:aq_876 peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: O67032 Peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_005512512.1	COGs: COG0130 Pseudouridine synthase; InterPro IPR014780:IPR020103:IPR015947:IPR002501:IPR 015240; KEGG: aae:aq_705 tRNA pseudouridine 55 synthase; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; SPTR: O66922 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_005512513.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR011991:IPR000943:IPR014284:IPR013325:IPR 013324:IPR009042:IPR007627:IPR007624:IPR007630; KEGG: aae:aq_1452 RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; SPTR: A8UY45 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005512514.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR011782:IPR001940:IPR001478:IPR009003:IPR 001254; KEGG: aae:aq_1450 periplasmic serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: A8UY43 Periplasmic serine protease; TIGRFAM: protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family
YP_005512515.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: aae:aq_2139 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: A8UY42 Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_005512516.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: aae:aq_2138 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: A8UY41 Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold
YP_005512517.1	COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR013785:IPR020050:IPR005244:IPR007197; KEGG: aae:aq_789 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: A8UQM1 Putative uncharacterized protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily
YP_005512518.1	COGs: COG3635 phosphoglycerate mutase AP superfamily; InterPro IPR000589:IPR004456:IPR017850:IPR019304:IPR 006124; KEGG: aae:aq_542 cofactor-independent phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein; PRIAM: Phosphoglycerate mutase; SPTR: O66820 Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: phosphonopyruvate decarboxylase-related protein; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme superfamily; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form
YP_005512519.1	KEGG: hya:HY04AAS1_0661 hypothetical protein; SPTR: A8UTI5 Putative uncharacterized protein
YP_005512520.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR017896:IPR017900; KEGG: aae:aq_067 dimethylsulfoxide reductase chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B5BT04 Fumarate reductase, E subunit; PFAM: 4Fe-4S binding domain
YP_005512521.1	COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001589:IPR010095; KEGG: saf:SULAZ_0153 transposase ORF_B; PFAM: transposase IS605 OrfB; SPTR: C1DXN8 Transposase ORF_B; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_005512522.1	COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006140:IPR006236:IPR006139:IPR 002912; KEGG: aae:aq_1905 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; SPTR: A8URU0 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase
YP_005512523.1	InterPro IPR008258; KEGG: glo:Glov_0248 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: A8V1U0 Transglycosylase SLT domain protein (Fragment); PFAM: Transglycosylase SLT domain
YP_005512524.1	COGs: COG0587 DNA polymerase III alpha subunit; InterPro IPR004805:IPR003141:IPR016195:IPR004013:IPR 011708:IPR004365; KEGG: aae:aq_1008 DNA polymerase III alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: phosphoesterase PHP domain protein; SPTR: O67125 DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_005512525.1	COGs: COG2383 conserved hypothetical protein; InterPro IPR007014; KEGG: pab:PAB7281 hypothetical protein; PFAM: FUN14 family protein; SPTR: Q9UZM8 Putative uncharacterized protein; PFAM: FUN14 family
YP_005512526.1	COGs: COG2516 Biotin synthase-related protein; InterPro IPR013785:IPR006638:IPR007197; KEGG: aae:aq_1958 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8UTV0 Putative uncharacterized protein; PFAM: Radical SAM superfamily
YP_005512527.1	COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR002637; KEGG: aae:aq_202 hypothetical protein; PFAM: Ham1 family protein; SPTR: A8UUE2 Nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_005512528.1	COGs: COG1856 Uncharacterized homolog of biotin synthetase; InterPro IPR013785:IPR006638:IPR007197; KEGG: aae:aq_403 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: O66721 Putative uncharacterized protein; PFAM: Radical SAM superfamily
YP_005512529.1	COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR003016:IPR011053:IPR002930; KEGG: hya:HY04AAS1_1073 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: B4U9E8 Glycine cleavage H-protein; PFAM: Glycine cleavage H-protein
YP_005512530.1	COGs: COG2044 peroxiredoxins; InterPro IPR003787; KEGG: aae:aq_401 hypothetical protein; PFAM: DsrE family protein; SPTR: O66719 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_005512531.1	InterPro IPR012335:IPR012336; KEGG: hya:HY04AAS1_1075 hypothetical protein; SPTR: B4U9F0 Putative uncharacterized protein
YP_005512532.1	COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR003016:IPR011053:IPR002930; KEGG: aae:aq_1657 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: A8URD0 Glycine cleavage system protein H; PFAM: Glycine cleavage H-protein
YP_005512533.1	COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: aae:aq_400 heterodisulfide reductase subunit B; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: A8USP9 Heterodisulfide reductase subunit B; PFAM: Cysteine-rich domain
YP_005512534.1	COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR012285:IPR017900:IPR009051:IPR017896; KEGG: aae:aq_398 heterodisulfide reductase subunit C; SPTR: A8USP8 Heterodisulfide reductase subunit C
YP_005512535.1	KEGG: aae:aq_397 hypothetical protein; SPTR: A8USP7 Putative uncharacterized protein
YP_005512536.1	COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR016040:IPR013027; KEGG: aae:aq_395 heterodisulfide reductase subunit A; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: O66715 Heterodisulfide reductase subunit A; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005512537.1	COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: hya:HY04AAS1_1081 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A8USP5 Heterodisulfite reductase, subunit B (HdrB-1); PFAM: Cysteine-rich domain
YP_005512538.1	COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR012285:IPR017900:IPR009051:IPR017896; KEGG: hya:HY04AAS1_1082 hypothetical protein; SPTR: A8USP4 Putative uncharacterized protein
YP_005512539.1	COGs: COG2044 peroxiredoxins; KEGG: aae:aq_390 hypothetical protein; SPTR: A8USP3 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_005512540.1	COGs: COG2210 conserved hypothetical protein; KEGG: hya:HY04AAS1_1084 hypothetical protein; SPTR: B4U9F9 Putative uncharacterized protein
YP_005512541.1	InterPro IPR001455; KEGG: hya:HY04AAS1_1085 SirA family protein; PFAM: SirA family protein; SPTR: A8USP1 Putative uncharacterized protein; PFAM: SirA-like protein
YP_005512542.1	COGs: COG4911 conserved hypothetical protein; InterPro IPR018699; KEGG: aae:aq_1797 hypothetical protein; PFAM: Protein of unknown function DUF2203; SPTR: Q4R2T3 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2203)
YP_005512543.1	COGs: COG1238 membrane protein; InterPro IPR015414; KEGG: hya:HY04AAS1_0734 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein; SPTR: Q4R2T4 Putative uncharacterized protein; PFAM: SNARE associated Golgi protein
YP_005512544.1	COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: aae:aq_1625 hypothetical protein; SPTR: Q4R2T5 Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily
YP_005512545.1	InterPro IPR017896; KEGG: hya:HY04AAS1_0923 hypothetical protein; SPTR: Q4R2T6 [4Fe-4S] ferredoxin 2; PFAM: Protein of unknown function (DUF1271)
YP_005512546.1	InterPro IPR017896; KEGG: hya:HY04AAS1_0923 hypothetical protein; SPTR: Q75VV9 Putative ferredoxin; PFAM: Protein of unknown function (DUF1271)
YP_005512547.1	COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR016040:IPR005810:IPR016102:IPR003781:IPR 017440:IPR005811; KEGG: aae:aq_1622 succinyl-CoA ligase alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; SMART: CoA-binding domain protein; SPTR: Q75VW0 Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit
YP_005512548.1	COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterPro IPR013816:IPR005811:IPR016102:IPR013650:IPR 005809:IPR017866:IPR011761; KEGG: aae:aq_1620 succinyl-CoA ligase beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Q75VW1 Succinyl-CoA synthetase large subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit
YP_005512549.1	COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR012337:IPR006055:IPR013520:IPR006054; KEGG: aae:aq_932 DNA polymerase III epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: Q75VW2 Putative DNA polymerase III epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family
YP_005512550.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001305:IPR001623:IPR012724:IPR008971:IPR 002939:IPR003095; KEGG: aae:aq_1735 chaperone DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Q75VW3 Chaperone protein dnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ domain; DnaJ central domain (4 repeats); DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ
YP_005512551.1	KEGG: aae:aq_1502 hypothetical protein; SPTR: Q75VW4 Putative uncharacterized protein; manually curated
YP_005512552.1	COGs: COG0018 Arginyl-tRNA synthetase; InterPro IPR005148:IPR014729:IPR001412:IPR001278:IPR 015945:IPR009080:IPR008909; KEGG: aae:aq_923 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; DALR anticodon binding domain protein; PRIAM: Arginine--tRNA ligase; SPTR: O67068 Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_005512553.1	InterPro IPR007730; KEGG: aae:aq_1894 hypothetical protein; PFAM: Sporulation domain protein; SPTR: A8UW92 Putative uncharacterized protein; PFAM: Sporulation related domain
YP_005512554.1	COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR011990:IPR007730:IPR019734:IPR013026:IPR 001440; KEGG: aae:aq_1896 hypothetical protein; PFAM: Sporulation domain protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: A8UW91 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat; Sporulation related domain
YP_005512555.1	COGs: COG1041 DNA modification methylase; InterPro IPR001091:IPR002941; KEGG: dth:DICTH_1800 putative DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: B5YB86 Putative DNA methylase; PFAM: DNA methylase
YP_005512556.1	COGs: COG1656 conserved hypothetical protein; InterPro IPR002782; KEGG: aae:aq_1110 hypothetical protein; PFAM: protein of unknown function DUF82; SPTR: A8USH8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF82
YP_005512557.1	COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterPro IPR015931:IPR015932:IPR018136:IPR011823:IPR 011826:IPR006251:IPR001030; KEGG: hya:HY04AAS1_0519 3-isopropylmalate dehydratase large subunit; PFAM: aconitate hydratase domain protein; SPTR: B4U7U5 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein
YP_005512558.1	COGs: COG0465 ATP-dependent Zn protease; InterPro IPR003960:IPR005936:IPR003593:IPR011546:IPR 003959:IPR000642; KEGG: aae:aq_936 cell division protein FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: A8UWH5 Tryptophan synthase subunit beta; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_005512559.1	COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR014729:IPR012795:IPR011063; KEGG: aae:aq_1887 cell cycle protein MesJ; PFAM: PP-loop domain protein; SPTR: A8UWH4 Cell cycle protein MesJ; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_005512560.1	InterPro IPR005358:IPR010836; KEGG: bbk:BARBAKC583_0084 SapC family protein; PFAM: SapC family protein; protein of unknown function UPF0153; SPTR: A1UR19 SapC family protein; PFAM: SapC
YP_005512561.1	COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; KEGG: aae:aq_082 hypothetical protein; SPTR: O66494 Putative uncharacterized protein; PFAM: Glycoprotease family
YP_005512562.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015421:IPR015422:IPR015424:IPR000653; KEGG: aae:aq_1724 DegT/DnrJ/EryC1 family transcriptional regulator; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: O67617 Transcriptional regulator (DegT/DnrJ/Eryc1 family); PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_005512563.1	KEGG: aae:aq_116 hypothetical protein; SPTR: B5BT02 Fumarate reductase, C subunit
YP_005512564.1	COGs: COG1546 Uncharacterized protein (competence- and mitomycin-induced); InterPro IPR008136; KEGG: aae:aq_1996 hypothetical protein; PFAM: CinA domain protein; SPTR: O67801 Putative uncharacterized protein; PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain
YP_005512565.1	COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR018357:IPR010137:IPR011004:IPR001451; KEGG: aae:aq_604 UDP-N-acetylglucosamine acyltransferase; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR: A8UVU8 UDP-N-acetylglucosamine acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_005512566.1	COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR018357:IPR005882:IPR011004:IPR005835:IPR 001451; KEGG: aae:aq_607 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; SPTR: O66863 Bifunctional protein glmU; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_005512567.1	COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR018099:IPR010044:IPR000845; KEGG: aae:aq_568 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: O66839 Purine nucleoside phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase
YP_005512568.1	COGs: COG0858 Ribosome-binding factor A; InterPro IPR015946:IPR020053:IPR000238; KEGG: aae:aq_106a ribosome-binding factor A; PFAM: ribosome-binding factor A; SPTR: A9ZHY1 Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_005512569.1	COGs: COG1204 Superfamily II helicase; InterPro IPR014001:IPR001650:IPR014021:IPR011545; KEGG: aae:aq_1328 hypothetical protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: O67347 Putative uncharacterized protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_005512570.1	KEGG: aae:aq_408 hypothetical protein; SPTR: O66725 Putative uncharacterized protein
YP_005512571.1	COGs: COG0796 Glutamate racemase; InterPro IPR001920:IPR018187:IPR004391:IPR015942; KEGG: aae:aq_325 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: Q05KC9 Putative glutamate racemase (Fragment); TIGRFAM: glutamate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_005512572.1	COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR013816:IPR011764:IPR013817:IPR005479:IPR 004549:IPR016185:IPR011054:IPR005482:IPR005481:IPR011761; KEGG: aae:aq_1664 biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; SMART: biotin carboxylase domain protein; SPTR: Q05KD0 Biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; manually curated; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase