-- dump date   	20120504_150647
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004169298.1	COGs: COG0515 Serine/threonine protein kinase; InterPro IPR002290: IPR019734: IPR000719: IPR017442: IPR001440; KEGG: sus:Acid_1208 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tetratricopeptide repeat; SPTR: Serine/threonine protein kinase with TPR repeats; PFAM: Protein kinase domain
YP_004169299.1	KEGG: bcj:BCAS0416 putative oxidoreductase; SPTR: 75c
YP_004169300.1	SPTR: Bacterial lipid A biosynthesis acyltransferase family
YP_004169301.1	COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); InterPro IPR015994: IPR001272; KEGG: rmr:Rmar_1197 phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP); SPTR: Phosphoenolpyruvate carboxykinase [ATP]; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP)
YP_004169302.1	COGs: COG0515 Serine/threonine protein kinase; InterPro IPR020635: IPR002290: IPR017441: IPR008271: IPR000719: IPR0174 42; KEGG: rop:ROP_67030 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Putative uncharacterized protein; PFAM: Protein kinase domain
YP_004169303.1	COGs: COG1027 Aspartate ammonia-lyase; InterPro IPR020557: IPR000362: IPR018951; KEGG: azo:azo0437 aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; SPTR: Aspartate ammonia-lyase; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase
YP_004169304.1	KEGG: mmi:MMAR_2116 PE-PGRS family protein; SPTR: PE-PGRS family protein
YP_004169305.1	SPTR: Putative uncharacterized protein P0463F06.44
YP_004169307.1	KEGG: cqu:CpipJ_CPIJ015082 gbx homeobox protein; SPTR: Gbx homeobox protein
YP_004169308.1	COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: plm:Plim_4103 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Putative UDPglucoseGDPmannose dehydrogenase protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_004169309.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1027 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1
YP_004169310.1	InterPro IPR022272; KEGG: mgm:Mmc1_2179 putative outer membrane adhesin like proteiin; SPTR: Putative outer membrane adhesin like proteiin
YP_004169311.1	COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR020583: IPR020550: IPR000760; KEGG: uma:UM01664.1 hypothetical protein; PFAM: inositol monophosphatase; SPTR: Ammonium transporter protein-like; PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, HAL2 family
YP_004169312.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1026 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1
YP_004169313.1	KEGG: ppl:POSPLDRAFT_134953 eukaryotic translation initiation factor 5B; SPTR: Predicted protein
YP_004169314.1	KEGG: sus:Acid_4663 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein
YP_004169315.1	COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856; KEGG: plm:Plim_4111 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family
YP_004169316.1	InterPro IPR019127: IPR013426; KEGG: dde:Dde_0847 hypothetical protein; PFAM: Exosortase EpsH-related; SPTR: Membrane protein, putative; TIGRFAM: eight transmembrane protein EpsH; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: eight transmembrane protein EpsH (proposed exosortase)
YP_004169317.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004169318.1	InterPro IPR007627: IPR013249: IPR014284; KEGG: rba:RB8027 hypothetical protein; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Serine/threonine protein kinase; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004169319.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR020904: IPR001509; KEGG: rrs:RoseRS_2395 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004169320.1	KEGG: paa:Paes_0409 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase ECF-type sigma factor; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004169321.1	KEGG: cyn:Cyan7425_1090 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004169322.1	KEGG: dpo:Dpse_GA22350 GA22350 gene product from transcript GA22350-RA; SPTR: GA22350
YP_004169323.1	KEGG: msv:Mesil_3348 cupin 2 conserved barrel domain protein; SPTR: Hypothetical conserved protein; PFAM: Replication initiator protein A
YP_004169324.1	InterPro IPR013026; KEGG: tgo:TGME49_065500 voltage gated chloride channel domain-containing protein; SPTR: Plus agglutinin
YP_004169325.1	InterPro IPR003751; KEGG: ppp:PHYPADRAFT_159956 hypothetical protein; PFAM: carbon storage regulator; SPTR: Predicted protein; PFAM: Global regulator protein family
YP_004169326.1	InterPro IPR002797; KEGG: gvi:gll3854 hypothetical protein; PFAM: polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein
YP_004169327.1	KEGG: sro:Sros_9182 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily
YP_004169328.1	COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: afn:Acfer_2072 cobyrinic acid ac-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004169329.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: chl:Chy400_1889 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004177147.1	COGs: COG0593 ATPase involved in DNA replication initiation; InterProIPR001957: IPR020591: IPR018312: IPR013317: IPR 013159: IPR003593; KEGG: scl:sce0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; SPTR: Chromosomal replication initiator protein dnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_004177148.1	COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: plm:Plim_3666 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_004177149.1	COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; InterPro IPR022272; KEGG: afw:Anae109_0563 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily
YP_004177150.1	COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: dol:Dole_2523 hypothetical protein; PFAM: Protein of unknown function DUF2088; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088)
YP_004177151.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020476: IPR020084: IPR000086; KEGG: ngr:NAEGRDRAFT_49855 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: Hydrolase, NUDIX family protein; PFAM: NUDIX domain
YP_004177152.1	COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR011761: IPR006275: IPR005483: IPR005479: IPR 005481: IPR005480: IPR011607; KEGG: psl:Psta_1525 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: Carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_004177153.1	InterPro IPR018247; KEGG: sit:TM1040_0284 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177154.1	COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: bts:Btus_0242 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator ArsR; PFAM: Bacterial regulatory protein, arsR family
YP_004177155.1	COGs: COG5658 integral membrane protein; InterPro IPR012867; KEGG: tpd:Teth39_1876 hypothetical protein; PFAM: protein of unknown function DUF1648; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1648)
YP_004177156.1	KEGG: rba:RB6463 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177157.1	COGs: COG1109 Phosphomannomutase; InterPro IPR005841: IPR016066: IPR005844: IPR005845; KEGG: rba:RB6061 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_004177158.1	COGs: COG3380 NAD/FAD-dependent oxidoreductase; InterPro IPR006076; KEGG: caa:Caka_1904 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein
YP_004177159.1	COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: psl:Psta_2815 stationary-phase survival protein SurE; PFAM: Survival protein SurE; SPTR: 5'-nucleotidase surE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE
YP_004177160.1	KEGG: psl:Psta_2816 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177161.1	KEGG: mno:Mnod_6296 glycosyl transferase family 2; SPTR: Glycosyl transferase family 2
YP_004177162.1	KEGG: eba:ebA1583 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177163.1	KEGG: mrd:Mrad2831_0866 8-amino-7-oxononanoate synthase; SPTR: Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase
YP_004177164.1	KEGG: plm:Plim_0750 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177165.1	KEGG: tva:TVAG_069880 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177166.1	COGs: COG0492 Thioredoxin reductase; InterPro IPR005982: IPR000103: IPR013027: IPR008255; KEGG: acp:A2cp1_4094 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_004177167.1	COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: nam:NAMH_0494 carbon storage regulator; PFAM: carbon storage regulator; SPTR: Carbon storage regulator homolog; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_004177168.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: psl:Psta_2596 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Phosphate regulon response regulator PhoB; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004177170.1	COGs: COG1117 ABC-type phosphate transport system ATPase component; InterPro IPR003439: IPR015850: IPR003593; KEGG: tkm:TK90_0954 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter
YP_004177171.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mmi:MMAR_2311 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase; PFAM: Glycosyl transferase family 2
YP_004177172.1	COGs: COG4102 conserved hypothetical protein; InterPro IPR001295: IPR010869; KEGG: psl:Psta_4282 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004177173.1	InterPro IPR003343: IPR011444; KEGG: plm:Plim_4094 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004177174.1	KEGG: psl:Psta_4284 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177175.1	KEGG: kse:Ksed_00190 serine/threonine protein kinase; SPTR: Serine/threonine protein kinase
YP_004177176.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: psl:Psta_4286 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004177177.1	KEGG: tfu:Tfu_2006 hypothetical protein; SPTR: Serine/threonine protein kinase
YP_004177178.1	SPTR: Putative uncharacterized protein
YP_004177179.1	COGs: COG1225 Peroxiredoxin; InterPro IPR017936: IPR000866; KEGG: aac:Aaci_1040 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PRIAM: Peroxiredoxin; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004177181.1	InterPro IPR002035; KEGG: psl:Psta_3985 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177182.1	COGs: COG2262 GTPase; InterPro IPR016496: IPR005225: IPR006073: IPR002917; KEGG: psl:Psta_3580 GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding proten HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain
YP_004177183.1	COGs: COG0130 Pseudouridine synthase; InterPro IPR014780: IPR002501; KEGG: sti:Sthe_1260 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: TRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_004177184.1	KEGG: scl:sce2251 hypothetical protein; SPTR: Hypothetical protein
YP_004177185.1	COGs: COG0253 Diaminopimelate epimerase; InterPro IPR001653: IPR018510; KEGG: plm:Plim_0185 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; PRIAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase
YP_004177186.1	KEGG: kse:Ksed_00620 malate dehydrogenase; SPTR: Predicted protein
YP_004177188.1	COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR009056: IPR019781: IPR 003343: IPR011444: IPR001680; KEGG: plm:Plim_1151 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; WD40 repeat, subgroup; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; WD-40 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: WD domain, G-beta repeat; Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553)
YP_004177189.1	InterPro IPR017909: IPR006311: IPR010869; KEGG: plm:Plim_1150 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004177190.1	COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR011603: IPR001017: IPR005475; KEGG: sfu:Sfum_3547 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component; PRIAM: Oxoglutarate dehydrogenase (succinyl-transferring); SPTR: 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component
YP_004177191.1	COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089: IPR006255: IPR004167: IPR001078; KEGG: sti:Sthe_2057 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
YP_004177192.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR006258: IPR013027: IPR000815: IPR012999: IPR 004099; KEGG: mag:amb3963 pyruvate/2-oxoglutarate dehydrogenase complex; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_004177193.1	COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR017936; KEGG: plm:Plim_0535 cytochrome c biogenesis protein transmembrane region; PRIAM: Protein-disulfide reductase; SPTR: Cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255
YP_004177194.1	KEGG: sus:Acid_2051 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177195.1	COGs: COG3183 restriction endonuclease; InterPro IPR002711; KEGG: tra:Trad_1508 HNH endonuclease; PFAM: HNH endonuclease; SPTR: HNH endonuclease; PFAM: HNH endonuclease
YP_004177196.1	COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: cyb:CYB_0994 hypothetical protein; SPTR: Putative membrane protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004177197.1	COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822: IPR001932; KEGG: plm:Plim_3158 stage II sporulation E family protein; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; SPTR: Stage II sporulation E family protein; PFAM: Stage II sporulation protein E (SpoIIE)
YP_004177198.1	COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR012795: IPR012796: IPR011063; KEGG: dau:Daud_0086 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; SPTR: tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_004177199.1	KEGG: ade:Adeh_3797 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177200.1	COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002528; KEGG: gbm:Gbem_1791 polysaccharide biosynthesis protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein
YP_004177201.1	InterPro IPR000595; KEGG: tcr:504449.30 hypothetical protein; PFAM: cyclic nucleotide-binding; SPTR: Putative uncharacterized protein; PFAM: Cyclic nucleotide-binding domain
YP_004177202.1	COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: ami:Amir_2074 SCP-like extracellular; PFAM: SCP-like extracellular; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich secretory protein family
YP_004177203.1	COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR019775: IPR014044; KEGG: ter:Tery_4644 allergen V5/TPX-1 related; PFAM: SCP-like extracellular; SPTR: SCP-like extracellular protein, putative; PFAM: Cysteine-rich secretory protein family
YP_004177204.1	KEGG: zpr:ZPR_0251 putative secreted protein; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase
YP_004177205.1	InterPro IPR010298; KEGG: psl:Psta_2939 protein of unknown function DUF901; PFAM: protein of unknown function DUF901; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF901)
YP_004177206.1	COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: psl:Psta_1357 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_004177207.1	COGs: COG0174 Glutamine synthetase; InterPro IPR004809: IPR008147: IPR008146; KEGG: psl:Psta_1754 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_004177208.1	KEGG: dba:Dbac_1387 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177209.1	KEGG: cin:100178638 similar to topoisomerase (DNA) III alpha; SPTR: Putative uncharacterized protein
YP_004177210.1	InterPro IPR012902; KEGG: plm:Plim_4074 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004177211.1	KEGG: tgu:100226598 RAS p21 protein activator (GTPase activating protein) 1; SPTR: TRAP transporter solute receptor, TAXI family
YP_004177212.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639: IPR000073; KEGG: svi:Svir_29320 predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold; SPTR: Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_004177213.1	KEGG: ttr:Tter_2666 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177214.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR019782: IPR017986: IPR006530: IPR 017441: IPR008271: IPR019775: IPR017442: IPR019781: IPR020635:I PR002290: IPR001680; KEGG: psl:Psta_3450 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; WD-40 repeat-containing protein; SPTR: Serine/threonine protein kinase; TIGRFAM: YD repeat protein; PFAM: Protein kinase domain; WD domain, G-beta repeat; TIGRFAM: YD repeat (two copies)
YP_004177215.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007630; KEGG: psl:Psta_2501 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 4 domain protein; SPTR: Probable RNA polymerase sigma-E factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1; RNA polymerase sigma factor, sigma-70 family
YP_004177216.1	COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: zpr:ZPR_2605 acyl-CoA thioester hydrolase; PFAM: thioesterase superfamily protein; SPTR: Acyl-CoA thioester hydrolase; PFAM: Thioesterase superfamily
YP_004177217.1	KEGG: psl:Psta_1977 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177218.1	COGs: COG4964 Flp pilus assembly protein secretin CpaC; InterPro IPR001775: IPR001814: IPR007055: IPR004846; KEGG: rba:RB13104 type II secretion system protein; PFAM: type II and III secretion system protein; transport-associated; SPTR: Probable type II secretion system protein; PFAM: Bacterial type II and III secretion system protein
YP_004177219.1	InterPro IPR000209; KEGG: bja:blr0521 hypothetical protein; SPTR: Blr0521 protein
YP_004177220.1	COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734: IPR013026: IPR001440; KEGG: ade:Adeh_2822 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat protein; PFAM: Tetratricopeptide repeat
YP_004177221.1	KEGG: pan:PODANSg8032 hypothetical protein; SPTR: Chromosome 10 SCAF15123, whole genome shotgun sequence.
YP_004177222.1	COGs: COG0443 Molecular chaperone; InterPro IPR001023: IPR018181: IPR013126; KEGG: cac:CA_C0472 HSP70/DnaK family protein; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; PFAM: Hsp70 protein
YP_004177223.1	InterPro IPR003675; KEGG: noc:Noc_1193 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family
YP_004177224.1	InterPro IPR000866: IPR005123: IPR006620; KEGG: rlg:Rleg_5934 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004177225.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: plm:Plim_2996 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004177226.1	InterPro IPR001845; KEGG: plm:Plim_2033 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: ArsR family transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family
YP_004177227.1	InterPro IPR014284: IPR000792; KEGG: bxe:Bxe_C1157 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004177228.1	COGs: COG0465 ATP-dependent Zn protease; InterProIPR005936: IPR003960: IPR003959: IPR000642: IPR 003593; KEGG: plm:Plim_1623 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: Cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_004177229.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002139: IPR011611; KEGG: syx:SynWH7803_0167 ribokinase family sugar kinase; PFAM: PfkB domain protein; SPTR: Putative sugar kinase; PFAM: pfkB family carbohydrate kinase
YP_004177230.1	COGs: COG0560 Phosphoserine phosphatase; InterPro IPR006383: IPR006385: IPR005834; KEGG: hch:HCH_05985 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Phosphoserine phosphatase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
YP_004177231.1	COGs: COG1109 Phosphomannomutase; InterProIPR005841: IPR005844: IPR005845: IPR005846: IPR 005843; KEGG: rba:RB9832 phosphomannomutase (pmm); PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Phosphomannomutase (Pmm); PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_004177232.1	COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014027; KEGG: nml:Namu_4191 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase; SPTR: Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_004177233.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: mmi:MMAR_2310 UDP-glucose 4-epimerase, GalE5; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase, GalE5; manually curated; PFAM: NAD dependent epimerase/dehydratase family
YP_004177234.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: hoh:Hoch_4258 peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region
YP_004177235.1	COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR010819; KEGG: bts:Btus_0399 protein of unknown function DUF255; PFAM: N-acylglucosamine 2-epimerase; SPTR: Putative uncharacterized protein; PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); Protein of unknown function, DUF255
YP_004177236.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000253: IPR000160; KEGG: afw:Anae109_4141 diguanylate cyclase; PFAM: GGDEF domain containing protein; Forkhead-associated protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004177237.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: plm:Plim_3631 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel
YP_004177238.1	COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; InterPro IPR000672: IPR020867: IPR020630: IPR020631; KEGG: acr:Acry_2656 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methenyltetrahydrofolate cyclohydrolase; SPTR: Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004177239.1	InterPro IPR002645; KEGG: tle:Tlet_0344 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004177240.1	KEGG: bpl:BURPS1106A_3676 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177241.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891: IPR005675: IPR002034: IPR013709; KEGG: plm:Plim_2070 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein
YP_004177242.1	COGs: COG0525 Valyl-tRNA synthetase; InterProIPR002303: IPR019754: IPR001412: IPR002300: IPR 013155: IPR019499; KEGG: plm:Plim_2069 valyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: Valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase
YP_004177243.1	InterPro IPR000086; KEGG: sus:Acid_0573 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain
YP_004177244.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR019782: IPR017986: IPR017441: IPR 008271: IPR019775: IPR017442: IPR019781: IPR020635: IPR002290:I PR001680; KEGG: psl:Psta_3450 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; WD-40 repeat-containing protein; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; WD domain, G-beta repeat
YP_004177245.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: psl:Psta_2330 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004177246.1	KEGG: cmi:CMM_0482 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177247.1	COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: psl:Psta_1334 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; manually curated; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase
YP_004177248.1	KEGG: ptr:461611 F-box protein 8; SPTR: Putative uncharacterized protein
YP_004177249.1	KEGG: slo:Shew_0685 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177250.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: chl:Chy400_1467 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase
YP_004177251.1	COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterProIPR010243: IPR007121: IPR007644: IPR007642: IPR 007645: IPR019462: IPR007120: IPR007641; KEGG: psl:Psta_2551 DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_004177252.1	COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR000206: IPR013823; KEGG: rmr:Rmar_1107 ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_004177253.1	COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: plm:Plim_0441 ribosomal protein L10-like protein; PFAM: ribosomal protein L10; SPTR: Probable 50S ribosomal protein L10; PFAM: Ribosomal protein L10
YP_004177254.1	COGs: COG0081 Ribosomal protein L1; InterPro IPR002143: IPR005878; KEGG: psl:Psta_2555 ribosomal protein L1; PFAM: ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_004177255.1	COGs: COG0080 Ribosomal protein L11; InterPro IPR006519: IPR020784: IPR020783: IPR000911; KEGG: tit:Thit_1987 ribosomal protein L11; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_004177256.1	COGs: COG0250 Transcription antiterminator; InterPro IPR001062: IPR006645: IPR005824; KEGG: plm:Plim_0438 transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; SMART: NGN domain-containing protein; KOW domain protein; SPTR: Transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG
YP_004177257.1	InterPro IPR005807: IPR001901; KEGG: rba:RB7897 SecE protein; PFAM: protein secE/sec61-gamma protein; SPTR: Putative uncharacterized protein secE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_004177258.1	InterPro IPR001705; KEGG: plm:Plim_0436 ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_004177259.1	COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541: IPR005225: IPR000795: IPR004161: IPR 004160; KEGG: rba:RB7894 elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; SPTR: Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; manually curated; PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_004177260.1	KEGG: ptr:473093 similar to Gene model 996, (NCBI); SPTR: Putative uncharacterized protein
YP_004177261.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: phe:Phep_3646 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_004177262.1	COGs: COG4961 Flp pilus assembly protein TadG; InterPro IPR012495; KEGG: pca:Pcar_1749 Flp pilus assembly protein TadG; PFAM: TadE family protein; SPTR: Flp pilus assembly protein TadG; PFAM: TadE-like protein
YP_004177263.1	InterPro IPR012495; KEGG: ctt:CtCNB1_2097 TadE-like protein; PFAM: TadE family protein; SPTR: TadE family protein; PFAM: TadE-like protein
YP_004177264.1	KEGG: psl:Psta_0521 von Willebrand factor type A; SPTR: von Willebrand factor type A
YP_004177265.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: sru:SRU_1197 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_004177266.1	KEGG: psl:Psta_0817 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177267.1	COGs: COG2170 conserved hypothetical protein; InterPro IPR011793: IPR006336; KEGG: gvi:gll2294 hypothetical protein; PFAM: glutamate--cysteine ligase GCS2; SPTR: Carboxylate-amine ligase PM8797T_05430; PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme
YP_004177268.1	COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR017439: IPR010168: IPR002933: IPR011650; KEGG: rba:RB4484 IAA-amino acid hydrolase 1; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: N-acetyldiaminopimelate deacetylase; SPTR: IAA-amino acid hydrolase 1; TIGRFAM: amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_004177269.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160: IPR002872: IPR015590; KEGG: psl:Psta_0870 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; SPTR: 1-pyrroline-5 carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative
YP_004177270.1	COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterPro IPR018512: IPR018511: IPR001343; KEGG: swp:swp_1383 hemolysin-type calcium-binding region; SPTR: Type I secretion target repeat protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies)
YP_004177271.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: cyb:CYB_1571 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat protein
YP_004177272.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004177273.1	KEGG: tth:TT_P0178 hemin transport system permease protein HmuU; SPTR: Hemin transport system permease protein hmuU
YP_004177274.1	InterPro IPR000866; KEGG: sus:Acid_3880 redoxin domain-containing protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Peroxiredoxin-like protein; PFAM: AhpC/TSA family
YP_004177275.1	COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR016228: IPR006264: IPR001986; KEGG: psl:Psta_2422 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_004177276.1	COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR003509; KEGG: psl:Psta_2264 protein of unknown function UPF0102; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein PM8797T_28449; PFAM: Uncharacterised protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252
YP_004177277.1	COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR000644: IPR004800: IPR018506: IPR001347; KEGG: psl:Psta_0845 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; PRIAM: Arabinose-5-phosphate isomerase; SPTR: KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein
YP_004177278.1	COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023: IPR006549; KEGG: psl:Psta_0844 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PRIAM: 3-deoxy-manno-octulosonate-8-phosphatase; SPTR: Phosphatase kdsC; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA
YP_004177279.1	KEGG: plm:Plim_3739 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177280.1	InterPro IPR007047; KEGG: psl:Psta_2071 Flp/Fap pilin component; PFAM: Flp/Fap pilin component; SPTR: Flp/Fap pilin component; PFAM: Flp/Fap pilin component
YP_004177281.1	InterPro IPR000045; KEGG: plm:Plim_0796 peptidase A24A prepilin type IV; PFAM: peptidase A24A prepilin type IV; SPTR: Peptidase A24A prepilin type IV; PFAM: Type IV leader peptidase family
YP_004177282.1	COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR017592; KEGG: bbt:BBta_7030 putative pilus assembly protein, CpaB; SPTR: Putative pilus assembly protein, cpaB; TIGRFAM: Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB
YP_004177283.1	COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: plm:Plim_0793 response regulator receiver; SPTR: Response regulator receiver protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004177284.1	COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR017975: IPR001482; KEGG: plm:Plim_1918 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein
YP_004177285.1	COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: rba:RB5941 secretion system protein TadB; PFAM: Type II secretion system F domain; SPTR: Secretion system protein TadB; PFAM: Bacterial type II secretion system protein F domain
YP_004177286.1	COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: plm:Plim_1916 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain
YP_004177287.1	KEGG: eat:EAT1b_1475 arginine/ornithine antiporter; SPTR: Putative uncharacterized protein
YP_004177288.1	KEGG: gga:423772 similar to KIAA0592 protein; SPTR: Putative uncharacterized protein
YP_004177289.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284: IPR018247: IPR000838: IPR007627: IPR 013249; KEGG: sth:STH2677 RNA polymerase ECF-type sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004177290.1	KEGG: hoh:Hoch_3681 serine/threonine protein kinase; SPTR: Serine/threonine protein kinase
YP_004177291.1	KEGG: rle:RL3065 hypothetical protein; SPTR: Fork head transcription factor 1
YP_004177292.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001940: IPR001254; KEGG: plm:Plim_3737 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SPTR: 2-alkenal reductase; PFAM: Trypsin
YP_004177293.1	COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR009056: IPR013428: IPR013427; KEGG: sli:Slin_5811 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; HEAT repeat; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004177294.1	COGs: COG0101 Pseudouridylate synthase; InterPro IPR001406: IPR020097; KEGG: psl:Psta_4219 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_004177295.1	COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterProIPR012080: IPR005986: IPR000319: IPR000534: IPR 012280; KEGG: dma:DMR_16050 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
YP_004177296.1	COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: cvi:CV_2967 ubiquinone biosynthesis protein; PFAM: ABC-1 domain-containing protein; SPTR: Probable ubiquinone biosynthesis protein; PFAM: ABC1 family
YP_004177297.1	COGs: COG1767 Triphosphoribosyl-dephospho-CoA synthetase; InterPro IPR002736; KEGG: psl:Psta_4265 triphosphoribosyl-dephospho-CoA protein; PFAM: triphosphoribosyl-dephospho-CoA protein; SPTR: Triphosphoribosyl-dephospho-CoA protein; PFAM: ATP:dephospho-CoA triphosphoribosyl transferase
YP_004177298.1	COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR011761: IPR004666: IPR013651; KEGG: psl:Psta_3185 alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; SPTR: Probable ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family
YP_004177299.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR017442: IPR 020635: IPR002290; KEGG: psl:Psta_1107 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004177300.1	COGs: COG2947 conserved hypothetical protein; InterPro IPR002740; KEGG: tel:tlr0743 hypothetical protein; PFAM: protein of unknown function DUF55; SPTR: Tlr0743 protein; PFAM: Protein of unknown function DUF55
YP_004177301.1	KEGG: plm:Plim_2797 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177302.1	InterPro IPR007267; KEGG: sat:SYN_02391 cell wall biogenesis glycosyltransferase; PFAM: GtrA family protein; SPTR: Glycosyltransferase involved in cell wall biogenesis; PFAM: GtrA-like protein
YP_004177303.1	COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506; KEGG: plm:Plim_4028 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_004177304.1	KEGG: sro:Sros_1356 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: CDP-alcohol phosphatidyltransferase
YP_004177305.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006140: IPR006139; KEGG: aco:Amico_1309 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004177306.1	KEGG: sco:SCO4215 GntR family regulatory protein; SPTR: Sec-independent protein translocase TatC
YP_004177307.1	KEGG: cpi:Cpin_1010 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177308.1	COGs: COG2071 glutamine amidotransferase; InterPro IPR017926: IPR011697; KEGG: gau:GAU_1361 glutamine amidotransferase class-I family protein; PFAM: peptidase C26; SPTR: Glutamine amidotransferase class-I family protein; PFAM: Peptidase C26
YP_004177309.1	InterPro IPR011467; KEGG: rba:RB1699 signal peptide; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573)
YP_004177310.1	COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; InterPro IPR001353; KEGG: dhd:Dhaf_3713 ATP-dependent protease peptidase subunit; PFAM: 20S proteasome A and B subunits; SPTR: ATP-dependent protease peptidase subunit; manually curated; PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit
YP_004177311.1	COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR004491: IPR013093: IPR003593; KEGG: adg:Adeg_0577 ATP-dependent protease ATP-binding subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; SPTR: ATP-dependent protease ATPase subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: ATP-dependent protease HslVU, ATPase subunit
YP_004177312.1	KEGG: ppa:PAS_chr2-1_0824 hypothetical protein; SPTR: GATA zinc finger domain-containing protein 1
YP_004177313.1	KEGG: dpe:Dper_GL15605 GL15605 gene product from transcript GL15605-RA; SPTR: GL15605
YP_004177314.1	COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterPro IPR005121: IPR004532: IPR005146: IPR005147; KEGG: rba:RB7112 phenylalanyl-tRNA synthetase beta chain; PFAM: B3/4 domain protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_004177315.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_0904 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004177316.1	InterPro IPR004360; KEGG: bpy:Bphyt_1430 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004177317.1	KEGG: rba:RB5189 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177318.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psl:Psta_3646 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase
YP_004177319.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004838: IPR013216; KEGG: bcv:Bcav_2198 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004177320.1	KEGG: clj:CLJU_c05530 putative polysaccharide biosynthesis protein; SPTR: Membrane protein involved in the export of O-antigen and teichoic acid
YP_004177321.1	InterPro IPR003342; KEGG: psl:Psta_0545 hypothetical protein; PFAM: glycosyl transferase family 39; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004177322.1	COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: rme:Rmet_5199 fumarylacetoacetate hydrolase; PFAM: fumarylacetoacetate (FAA) hydrolase; PRIAM: Ureidoglycolate lyase; SPTR: 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_004177323.1	KEGG: eba:ebA4323 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177324.1	KEGG: eba:ebA4323 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177325.1	KEGG: eba:ebA4323 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177326.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR010071: IPR020845: IPR000873; KEGG: eba:ebA4326 putative acyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: Putative acyl-CoA synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_004177327.1	COGs: COG1560 Lauroyl/myristoyl acyltransferase; KEGG: aeh:Mlg_2805 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; SPTR: Lipid A biosynthesis acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_004177328.1	KEGG: rba:RB9030 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177329.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659; KEGG: mxa:MXAN_6601 S9C family peptidase; PFAM: WD40-like beta Propeller containing protein; SPTR: Prolyl oligopeptidase family protein; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat
YP_004177330.1	KEGG: psl:Psta_2531 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DinB family
YP_004177331.1	COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterPro IPR018044: IPR001466: IPR002477: IPR001967; KEGG: psl:Psta_1647 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Peptidoglycan-binding domain 1 protein; beta-lactamase; SPTR: Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: Putative peptidoglycan binding domain; D-alanyl-D-alanine carboxypeptidase
YP_004177332.1	COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006236: IPR006140: IPR006139: IPR002912; KEGG: plm:Plim_2827 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase
YP_004177333.1	COGs: COG1570 Exonuclease VII large subunit; InterPro IPR003753: IPR004365: IPR020579; KEGG: plm:Plim_0430 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: Exodeoxyribonuclease VII; SPTR: Exodeoxyribonuclease 7 large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_004177334.1	KEGG: cpv:cgd1_590 hypothetical protein; SPTR: Subtilisin, putative
YP_004177335.1	COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR006674; KEGG: cfa:488744 HD domain containing 3; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: HD domain protein
YP_004177336.1	KEGG: dal:Dalk_2888 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177337.1	KEGG: xcb:XC_0878 protein kinases, catalytic domain; region: PKc_like; cl09925; SPTR: Putative uncharacterized protein
YP_004177338.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: gau:GAU_0826 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_004177339.1	KEGG: afo:Afer_1728 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Putative uncharacterized protein
YP_004177340.1	COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR004383: IPR007197; KEGG: plm:Plim_2783 radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family
YP_004177341.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: psl:Psta_1783 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004177342.1	COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: cja:CJA_0425 competence protein ComF; PFAM: phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein
YP_004177343.1	COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: psl:Psta_2360 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_004177344.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR001176: IPR004838: IPR004839; KEGG: ttr:Tter_0434 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and II
YP_004177345.1	KEGG: mbr:MONBRDRAFT_8053 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177346.1	KEGG: dre:445226 zgc:100957; SPTR: Putative uncharacterized protein
YP_004177347.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: ttr:Tter_1808 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_004177348.1	KEGG: plm:Plim_3249 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177349.1	COGs: COG4099 peptidase; InterPro IPR001330: IPR010496: IPR003140; KEGG: plm:Plim_2385 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; Prenyltransferase/squalene oxidase; phospholipase/Carboxylesterase; SPTR: Putative uncharacterized protein; PFAM: Prenyltransferase and squalene oxidase repeat; Domain of Unknown Function (DUF1080); Putative esterase
YP_004177350.1	KEGG: mac:MA3428 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177352.1	KEGG: cag:Cagg_3809 protein of unknown function DUF88; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88
YP_004177353.1	KEGG: tva:TVAG_332710 hypothetical protein
YP_004177354.1	COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: psl:Psta_1182 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme
YP_004177355.1	COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000111: IPR020578: IPR000192; KEGG: ddf:DEFDS_2124 serine--glyoxylate transaminase; PFAM: aminotransferase class V; SPTR: Serine--glyoxylate transaminase; PFAM: Aminotransferase class-V
YP_004177356.1	COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496; KEGG: dde:Dde_3567 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; PRIAM: Phosphoribosyl-AMP cyclohydrolase; SPTR: Phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase
YP_004177357.1	InterPro IPR013026; KEGG: afw:Anae109_3372 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004177358.1	InterPro IPR013026: IPR004027: IPR019734; KEGG: psl:Psta_1877 hypothetical protein; PFAM: SEC-C motif domain protein; SMART: Tetratricopeptide repeat; SPTR: Protein disulfide-isomerase-like protein; PFAM: SEC-C motif
YP_004177359.1	COGs: COG1160 GTPase; InterPro IPR005225: IPR016484: IPR002917; KEGG: psl:Psta_1973 small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain
YP_004177360.1	KEGG: smd:Smed_5899 protein of unknown function DUF395 YeeE/YedE; SPTR: Putative uncharacterized protein
YP_004177361.1	KEGG: nca:Noca_1392 PAS sensor protein; SPTR: PAS sensor protein
YP_004177362.1	KEGG: xce:Xcel_3000 NLP/P60 protein; SPTR: NLP/P60 protein
YP_004177363.1	COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004635: IPR002142; KEGG: nde:NIDE2543 putative signal peptide peptidase SppA; PFAM: peptidase S49; SPTR: Signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type
YP_004177364.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: nhl:Nhal_0558 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004177365.1	COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR001404: IPR020575: IPR003594; KEGG: lic:LIC12469 HSP90 family protein; PFAM: ATP-binding region ATPase domain protein; SPTR: HtpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004177366.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 004358: IPR013655: IPR003661: IPR003594: IPR001610; KEGG: dma:DMR_33580 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver; SPTR: Two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004177367.1	COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR019554; KEGG: rba:RB754 polysaccharide export protein; PFAM: Soluble ligand binding domain; SPTR: Wza; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain
YP_004177368.1	KEGG: uma:UM06005.1 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177369.1	KEGG: cre:CHLREDRAFT_196816 glyoxal or galactose oxidase; SPTR: Minus agglutinin
YP_004177370.1	KEGG: pic:PICST_85888 transcription factor which mediates glucose repression; SPTR: Transcription factor which mediates glucose repression
YP_004177371.1	KEGG: oaa:100080472 similar to Src homology 3 domain-containing guanine nucleotide exchange factor; SPTR: Putative uncharacterized protein
YP_004177372.1	KEGG: bcl:ABC1424 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177373.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: plm:Plim_0746 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family
YP_004177374.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: psl:Psta_2466 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_004177375.1	COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: gau:GAU_2047 hypothetical membrane protein; PFAM: SNARE associated Golgi protein; SPTR: Hypothetical membrane protein; PFAM: SNARE associated Golgi protein
YP_004177376.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: plm:Plim_1577 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004177377.1	COGs: COG2096 conserved hypothetical protein; InterPro IPR017858: IPR002779; KEGG: rmr:Rmar_1592 ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase
YP_004177378.1	COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: psl:Psta_4140 WD40 domain protein beta propeller; PFAM: WD40-like beta Propeller containing protein; SPTR: WD40 domain protein beta Propeller; PFAM: WD40-like Beta Propeller Repeat
YP_004177379.1	KEGG: plm:Plim_3923 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF664)
YP_004177380.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR017442: IPR 020635: IPR002290; KEGG: cya:CYA_2146 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004177381.1	InterPro IPR001478; KEGG: ote:Oter_4030 PDZ/DHR/GLGF domain-containing protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: PDZ/DHR/GLGF domain protein; PFAM: PDZ domain (Also known as DHR or GLGF)
YP_004177382.1	InterPro IPR001478: IPR001969; KEGG: rlt:Rleg2_1589 membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Membrane-associated zinc metalloprotease; PFAM: PDZ domain (Also known as DHR or GLGF)
YP_004177383.1	KEGG: pyo:PY00560 hypothetical protein; SPTR: Putative uncharacterized protein PY00560; manually curated
YP_004177384.1	KEGG: sna:Snas_2029 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177385.1	KEGG: der:Dere_GG18161 GG18161 gene product from transcript GG18161-RA; SPTR: GG18161
YP_004177386.1	COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR002035: IPR013694: IPR006587; KEGG: psl:Psta_0406 von Willebrand factor type A; PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain-containing protein; SMART: von Willebrand factor type A; Vault protein inter-alpha-trypsin, metazoa; SPTR: Inter-alpha-trypsin inhibitor family heavy chain-related protein-hypothetical secreted or membrane-associated; PFAM: Vault protein inter-alpha-trypsin; von Willebrand factor type A domain
YP_004177387.1	KEGG: chu:CHU_3727 b-glycosidase, CBM9 module, glycoside hydrolase family 8 protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1083)
YP_004177388.1	KEGG: plm:Plim_0217 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177389.1	KEGG: nfi:NFIA_102750 hypothetical protein; SPTR: Predicted protein; PFAM: Lipoprotein Rz1 precursor
YP_004177390.1	InterPro IPR011465; KEGG: cre:CHLREDRAFT_10029 fibrocystin-L-like protein; PFAM: protein of unknown function DUF1571; SPTR: Plus agglutinin; PFAM: Protein of unknown function (DUF1571)
YP_004177391.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: psl:Psta_0568 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator-like protein; PFAM: Response regulator receiver domain
YP_004177392.1	COGs: COG2215 ABC-type uncharacterized transport system permease component; KEGG: cai:Caci_3988 high-affinity nickel-transporter; SPTR: High-affinity nickel-transporter; PFAM: High-affinity nickel-transport protein
YP_004177393.1	InterPro IPR010496; KEGG: rmr:Rmar_1742 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080)
YP_004177394.1	KEGG: srm:SRM_01011 conserved hypothetical protein, secreted; SPTR: Putative uncharacterized protein
YP_004177395.1	COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569; KEGG: nmu:Nmul_A2452 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_004177396.1	KEGG: cag:Cagg_0419 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088)
YP_004177397.1	InterPro IPR013424; KEGG: bja:blr0478 hypothetical protein; SPTR: Conserved repeat domain protein; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004177398.1	COGs: COG1869 ABC-type ribose transport system auxiliary component; InterPro IPR007721; KEGG: gct:GC56T3_3248 RbsD or FucU transport; PFAM: RbsD or FucU transport; SPTR: Putative uncharacterized protein; PFAM: RbsD / FucU transport protein family
YP_004177399.1	KEGG: dia:Dtpsy_3135 primosomal protein N'; SPTR: Putative DNA internalization-related competence protein ComEC/Rec2
YP_004177400.1	KEGG: tcr:510625.10 dispersed gene family protein 1 (DGF-1); SPTR: Dispersed gene family protein 1 (DGF-1), putative
YP_004177401.1	COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: rba:RB10853 lysophospholipase; PFAM: alpha/beta hydrolase fold; SPTR: Probable lysophospholipase; PFAM: Putative lysophospholipase
YP_004177402.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: rba:RB10855 muconate cycloisomerase I; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: Muconate cycloisomerase I; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
YP_004177403.1	COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterProIPR020599: IPR011768: IPR013185: IPR001059: IPR 015365; KEGG: aca:ACP_2876 translation elongation factor P; PFAM: Elongation factor P; Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein; SPTR: Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_004177404.1	InterPro IPR008454; KEGG: rca:Rcas_2197 hypothetical protein; PFAM: Cna B domain protein; SPTR: Conserved repeat domain; PFAM: Cna protein B-type domain
YP_004177405.1	KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; SPTR: Putative uncharacterized protein
YP_004177406.1	COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR003583; KEGG: plm:Plim_2967 helix-hairpin-helix DNA-binding class 1; SMART: Helix-hairpin-helix DNA-binding class 1; SPTR: Helix-hairpin-helix DNA-binding class 1; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_004177407.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR019734: IPR000719: IPR013026: IPR017442: IPR 001440: IPR020635: IPR002290; KEGG: mno:Mnod_2431 peptidase C14 caspase catalytic subunit P20; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: TPR domain protein; PFAM: Protein kinase domain; Tetratricopeptide repeat; TIGRFAM: DNA binding domain, excisionase family
YP_004177408.1	KEGG: phe:Phep_2409 heparinase II/III family protein; SPTR: Heparinase II/III family protein
YP_004177409.1	KEGG: tbr:Tb11.01.4480 hypothetical protein; SPTR: Predicted protein
YP_004177410.1	COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078: IPR001608; KEGG: psl:Psta_1019 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR: Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_004177411.1	COGs: COG1872 conserved hypothetical protein; InterPro IPR003746; KEGG: scl:sce8156 hypothetical protein; PFAM: protein of unknown function DUF167; SPTR: UPF0235 protein DehlyDRAFT_1349; PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: conserved hypothetical protein TIGR00251
YP_004177412.1	COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482: IPR001208: IPR000523: IPR003593; KEGG: plm:Plim_0159 Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_004177413.1	COGs: COG1706 Flagellar basal-body P-ring protein; InterPro IPR001782; KEGG: plm:Plim_1168 flagellar P-ring protein; PFAM: flagellar P-ring protein; SPTR: Flagellar P-ring protein; PFAM: Flagellar P-ring protein
YP_004177414.1	KEGG: fra:Francci3_0051 hypothetical protein; SPTR: Lyase
YP_004177415.1	InterPro IPR001789: IPR010093; KEGG: psl:Psta_3012 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Response regulator receiver domain; TIGRFAM: DNA binding domain, excisionase family
YP_004177416.1	COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: mbt:JTY_3390 molybdenum cofactor biosynthesis protein MoaC; PFAM: molybdopterin cofactor biosynthesis protein MoaC; SPTR: Molybdenum cofactor biosynthesis protein C 3 moaC3; TIGRFAM: molybdenum cofactor biosynthesis protein C; manually curated; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_004177417.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: plm:Plim_0149 trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; SPTR: Trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase
YP_004177418.1	COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR004447: IPR005151; KEGG: plm:Plim_2514 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_004177419.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006655: IPR006963: IPR006656: IPR006657; KEGG: hau:Haur_4673 molybdopterin oxidoreductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; PRIAM: Nitrate reductase; SPTR: Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_004177420.1	COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: gsu:GSU0485 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2064)
YP_004177421.1	COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268: IPR011270: IPR000845; KEGG: psl:Psta_3240 purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; SPTR: Purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family
YP_004177422.1	COGs: COG0474 Cation transport ATPase; InterProIPR001757: IPR000695: IPR018303: IPR004014: IPR 008250: IPR005834: IPR006068; KEGG: sat:SYN_00872 calcium-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Calcium-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type
YP_004177423.1	COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR013108: IPR012855; KEGG: sro:Sros_1552 N-acyl-D-glutamate deacylase; PFAM: D-aminoacylase domain protein; Amidohydrolase 3; PRIAM: N-acyl-D-glutamate deacylase; SPTR: N-acyl-D-glutamate deacylase; PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family
YP_004177424.1	InterPro IPR000834: IPR008391; KEGG: psl:Psta_2878 hypothetical protein; PFAM: Acetyl xylan esterase; SPTR: Putative uncharacterized protein; PFAM: Acetyl xylan esterase (AXE1)
YP_004177425.1	KEGG: fre:Franean1_5618 ATP-dependent transcription regulator LuxR; SPTR: ATP-dependent transcriptional regulator, MalT-like, LuxR family
YP_004177426.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: pvi:Cvib_1640 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily
YP_004177427.1	InterPro IPR011444: IPR010869; KEGG: psl:Psta_3333 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); Protein of unknown function (DUF1549)
YP_004177428.1	KEGG: min:Minf_1147 Zn-dependent hydrolase, glyoxylase family; SPTR: Putative uncharacterized protein
YP_004177429.1	COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR013023: IPR013116: IPR000506; KEGG: psl:Psta_4689 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_004177430.1	COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789: IPR002912: IPR019455; KEGG: psl:Psta_4688 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: Acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit
YP_004177431.1	InterPro IPR017504; KEGG: rba:RB4470 signal peptide; SPTR: Putative uncharacterized protein; TIGRFAM: Planctomycetes uncharacterized domain TIGR03067
YP_004177432.1	InterPro IPR005829; KEGG: rrs:RoseRS_0128 peptidase C14, caspase catalytic subunit P20; SPTR: Peptidase C14, caspase catalytic subunit p20
YP_004177433.1	COGs: COG1904 Glucuronate isomerase; KEGG: plm:Plim_2160 amidohydrolase 2; SPTR: Putative uncharacterized protein; PFAM: Glucuronate isomerase
YP_004177434.1	KEGG: cdi:DIP0357 putative secreted bifunctional (alpha-amylase and endo-alpha-glucosidase): starch degradation and integral membrane protein; SPTR: Putative secreted bifunctional (Alpha-amylase and endo-alpha-glucosidase): starch degradation and integral membrane protein
YP_004177435.1	COGs: COG3379 conserved hypothetical protein; InterPro IPR001917: IPR002591; KEGG: hoh:Hoch_2285 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_004177436.1	KEGG: psb:Psyr_1958 non-ribosomal peptide synthase:amino acid adenylation; SPTR: Non-ribosomal peptide synthase:Amino acid adenylation
YP_004177437.1	InterPro IPR009056: IPR013427; KEGG: plm:Plim_3308 heme-binding protein; SPTR: Putative uncharacterized protein; TIGRFAM: heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004177438.1	InterPro IPR001173; KEGG: jan:Jann_0217 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004177439.1	KEGG: nda:Ndas_1372 transcriptional regulator, winged helix family; SPTR: Transcriptional regulator, winged helix family
YP_004177440.1	COGs: COG0259 Pyridoxamine-phosphate oxidase; InterPro IPR000659: IPR019740: IPR011576: IPR019576; KEGG: bmj:BMULJ_02532 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; PRIAM: Pyridoxal 5'-phosphate synthase; SPTR: Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase
YP_004177441.1	KEGG: aor:AO090020000039 guanine nucleotide exchange factor; SPTR: Alpha-2-macroglobulin domain protein; manually curated
YP_004177442.1	InterPro IPR018247; KEGG: rbi:RB2501_05365 probable large multifunctional protein-putative glycosyl hydrolase; SPTR: Probable large multifunctional protein-putative glycosyl hydrolase
YP_004177443.1	COGs: COG3169 conserved hypothetical protein; InterPro IPR007437; KEGG: dia:Dtpsy_2708 protein of unknown function DUF486; PFAM: protein of unknown function DUF486; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF486
YP_004177444.1	COGs: COG2382 Enterochelin esterase; InterPro IPR004193: IPR000801; KEGG: sli:Slin_1254 putative esterase; PFAM: esterase; glycoside hydrolase family 13 domain protein; SPTR: Putative esterase; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Putative esterase
YP_004177445.1	KEGG: psl:Psta_3458 methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: DsrE/DsrF-like family
YP_004177446.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: plm:Plim_0571 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase
YP_004177447.1	COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: rba:RB4366 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; SPTR: Putative uncharacterized protein; PFAM: Macro domain
YP_004177448.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: rba:RB7823 transaminase; PFAM: aminotransferase class I and II; SPTR: Probable transaminase; PFAM: Aminotransferase class I and II
YP_004177449.1	InterPro IPR000297; KEGG: plm:Plim_2735 PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004177450.1	COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: gau:GAU_2335 gamma-glutamyltranspeptidase precursor; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_004177451.1	InterPro IPR000119; KEGG: tgr:Tgr7_2924 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Histone family protein DNA-binding protein; PFAM: Bacterial DNA-binding protein
YP_004177452.1	InterPro IPR013096; KEGG: mka:MK0873 mannose-6-phosphate isomerase; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain
YP_004177453.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: psl:Psta_1220 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004177454.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR004099: IPR000815; KEGG: hch:HCH_00152 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Putative pyridine nucleotide-disulfide oxidoreductase, class I; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_004177455.1	InterPro IPR010869: IPR006311: IPR017909; KEGG: rba:RB12159 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004177456.1	InterPro IPR011444; KEGG: rba:RB12155 signal peptide; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553)
YP_004177457.1	KEGG: aag:AaeL_AAEL001032 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177458.1	InterPro IPR013740: IPR009056: IPR017936; KEGG: psl:Psta_2862 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin domain protein; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; Redoxin
YP_004177459.1	COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197: IPR006638; KEGG: rba:RB5334 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Fe-S oxidoreductase; PFAM: Radical SAM superfamily
YP_004177460.1	KEGG: rrs:RoseRS_1412 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177461.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004033; KEGG: psl:Psta_1787 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases
YP_004177462.1	COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: plm:Plim_2359 protein of unknown function DUF1009; PFAM: protein of unknown function DUF1009; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1009)
YP_004177463.1	COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR020573: IPR001451: IPR018357: IPR007691; KEGG: plm:Plim_2360 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_004177464.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR013655: IPR013656: IPR003661: IPR003594: IPR 001789: IPR000014: IPR004358: IPR005467: IPR000700; KEGG: nde:NIDE1908 putative sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; SPTR: Sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004177465.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834: IPR006439; KEGG: plm:Plim_4115 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Putative uncharacterized protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_004177466.1	COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR000905: IPR017861; KEGG: plm:Plim_2513 metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family
YP_004177467.1	COGs: COG2730 Endoglucanase; InterPro IPR001547: IPR018087; KEGG: trq:TRQ2_1074 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5; SPTR: Glycoside hydrolase family 5; PFAM: Cellulase (glycosyl hydrolase family 5)
YP_004177468.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: psl:Psta_2870 peptidase M24; PFAM: peptidase M24; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24
YP_004177469.1	COGs: COG3252 Methenyltetrahydromethanopterin cyclohydrolase; InterPro IPR003209; KEGG: plm:Plim_2586 methenyltetrahydromethanopterin cyclohydrolase; PFAM: Methenyltetrahydromethanopterin cyclohydrolase; PRIAM: Methenyltetrahydromethanopterin cyclohydrolase; SPTR: Methenyltetrahydromethanopterin cyclohydrolase; TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; PFAM: Cyclohydrolase (MCH); TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase
YP_004177470.1	COGs: COG2218 Formylmethanofuran dehydrogenase subunit C; InterPro IPR002489: IPR017550; KEGG: nhl:Nhal_0012 formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein; PRIAM: Formylmethanofuran dehydrogenase; SPTR: Formylmethanofuran dehydrogenase subunit C; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C
YP_004177471.1	COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: tgr:Tgr7_0480 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis lauroyl (Or palmitoleoyl) acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_004177472.1	InterPro IPR006163: IPR009081; KEGG: drt:Dret_1416 acyl carrier protein; PFAM: phosphopantetheine-binding; SPTR: Phosphopantetheine-binding; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_004177473.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031; KEGG: aae:aq_1717 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_004177474.1	COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451: IPR018357; KEGG: scl:sce6563 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial transferase hexapeptide (three repeats)
YP_004177475.1	InterPro IPR006163: IPR006162: IPR009081; KEGG: scl:sce6564 hypothetical protein; PFAM: phosphopantetheine-binding; SPTR: Putative uncharacterized protein; manually curated; PFAM: Phosphopantetheine attachment site
YP_004177476.1	InterPro IPR002314: IPR000408: IPR006195; KEGG: scl:sce6565 hypothetical protein; PFAM: tRNA synthetase class II (G H P and S); SPTR: SerS1 protein; PFAM: tRNA synthetase class II core domain (G, H, P, S and T)
YP_004177477.1	InterPro IPR000182; KEGG: scl:sce6566 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177478.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: psl:Psta_4753 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_004177479.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: sth:STH913 peptidase; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 inactive domain family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_004177481.1	COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376: IPR001555: IPR004607; KEGG: sti:Sthe_1363 phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_004177482.1	COGs: COG0060 Isoleucyl-tRNA synthetase; InterProIPR002300: IPR013155: IPR010663: IPR001412: IPR 002301: IPR015905; KEGG: mta:Moth_0863 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; SPTR: Strongly similar to isoleucine tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase
YP_004177483.1	COGs: COG3696 Putative silver efflux pump; InterPro IPR001036: IPR004763; KEGG: mca:MCA2324 CzcA family heavy metal efflux protein; PFAM: acriflavin resistance protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_004177484.1	InterPro IPR006143; KEGG: mca:MCA2325 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004177485.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mca:MCA2329 outer membrane efflux family protein, putative; PFAM: outer membrane efflux protein; SPTR: Putative outer membrane efflux family protein; PFAM: Outer membrane efflux protein
YP_004177486.1	InterPro IPR011447: IPR017909; KEGG: psl:Psta_3460 protein of unknown function DUF1552; PFAM: protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552)
YP_004177487.1	InterPro IPR013036: IPR013043: IPR013042: IPR013039; KEGG: plm:Plim_0129 protein of unknown function DUF1592; PFAM: protein of unknown function DUF1592; protein of unknown function DUF1595; protein of unknown function DUF1587; protein of unknown function DUF1588; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1592); Protein of unknown function (DUF1587); Protein of unknown function (DUF1588); Protein of unknown function (DUF1595); Protein of unknown function (DUF1585)
YP_004177488.1	InterPro IPR004861; KEGG: hypothetical protein; PFAM: tyrosine phosphatase; SPTR: Putative uncharacterized protein; PFAM: Tyrosine phosphatase family
YP_004177489.1	COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839; KEGG: caa:Caka_0677 putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; SPTR: Aminotransferase; PFAM: Aminotransferase class I and II
YP_004177490.1	COGs: COG0795 permease; InterPro IPR005495; KEGG: plm:Plim_2512 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family
YP_004177491.1	COGs: COG0795 permease; InterPro IPR005495; KEGG: psl:Psta_2358 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family
YP_004177492.1	KEGG: plm:Plim_3310 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177493.1	KEGG: plm:Plim_3310 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177494.1	KEGG: fre:Franean1_4095 hypothetical protein
YP_004177495.1	COGs: COG0620 Methionine synthase II (cobalamin-independent); InterPro IPR002629; KEGG: rca:Rcas_2758 methionine synthase vitamin-B12 independent; PFAM: Methionine synthase vitamin-B12 independent; SPTR: Methionine synthase vitamin-B12 independent; PFAM: Cobalamin-independent synthase, Catalytic domain
YP_004177496.1	COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: sli:Slin_6275 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177497.1	COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484: IPR018485: IPR018483: IPR006000; KEGG: plm:Plim_0722 xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Xylulose kinase; TIGRFAM: xylulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase
YP_004177498.1	KEGG: ade:Adeh_0165 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177499.1	KEGG: pan:PODANSg5339 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177500.1	KEGG: plm:Plim_0529 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177501.1	KEGG: cfa:474868 bromodomain containing 2; SPTR: Putative uncharacterized protein Brd2
YP_004177502.1	KEGG: dre:797750 KIAA1447-like; SPTR: Putative uncharacterized protein
YP_004177503.1	KEGG: plm:Plim_0766 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177504.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: plm:Plim_1158 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004177505.1	KEGG: nda:Ndas_3773 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104)
YP_004177506.1	KEGG: rcu:RCOM_0939530 protein binding protein, putative; SPTR: Proline-rich extensin-like protein
YP_004177507.1	COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: plm:Plim_3748 sulphate transporter; PFAM: sulphate transporter; SPTR: Sulphate transporter; PFAM: Sulfate transporter family
YP_004177508.1	COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137: IPR017900: IPR017896; KEGG: geo:Geob_1699 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_004177509.1	COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR001268; KEGG: geo:Geob_1700 NADH dehydrogenase (ubiquinone) 30 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: NADH dehydrogenase (Ubiquinone) 30 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit
YP_004177510.1	COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: dat:HRM2_39000 HyfF; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: HyfF; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_004177511.1	COGs: COG4237 Hydrogenase 4 membrane component (E); KEGG: dat:HRM2_38990 HyfE; SPTR: NAD-dependent dehydrogenase subunit
YP_004177512.1	COGs: COG0650 Formate hydrogenlyase subunit 4; KEGG: gme:Gmet_0374 respiratory-chain NADH dehydrogenase subunit 1; SPTR: Respiratory-chain NADH dehydrogenase, subunit 1; PFAM: NADH dehydrogenase
YP_004177513.1	COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750: IPR003918; KEGG: dat:HRM2_38970 HyfB; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: HyfB; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_004177514.1	COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR000551: IPR010093: IPR002178; KEGG: gur:Gura_0893 putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: regulatory protein MerR; SPTR: Putative PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: DNA binding domain, excisionase family
YP_004177515.1	COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: plm:Plim_3775 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family
YP_004177516.1	InterPro IPR002645: IPR003658; KEGG: plm:Plim_2057 anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Probable anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor); TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004177517.1	COGs: COG0249 Mismatch repair ATPase (MutS family); InterProIPR007695: IPR007860: IPR007696: IPR007861: IPR 000432: IPR005748; KEGG: plm:Plim_4057 DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: DNA mismatch repair protein mutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS
YP_004177518.1	InterPro IPR013517; KEGG: psl:Psta_0040 FG-GAP repeat protein; PFAM: FG-GAP repeat protein; SPTR: FG-GAP repeat protein; PFAM: FG-GAP repeat
YP_004177519.1	COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001440: IPR019734: IPR013026; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat
YP_004177520.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_3345 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004177521.1	KEGG: mxa:MXAN_3772 putative lipoprotein; SPTR: Putative lipoprotein
YP_004177522.1	KEGG: reu:Reut_A1745 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177523.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR003148; KEGG: rba:RB2059 putative nucleoside-diphosphate-sugar epimerase; PFAM: TrkA-N domain protein; SPTR: Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family
YP_004177524.1	COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); InterPro IPR005227: IPR006641; KEGG: psl:Psta_3924 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; SPTR: Putative Holliday junction resolvase; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF
YP_004177525.1	COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835: IPR001538; KEGG: ttr:Tter_0486 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_004177526.1	COGs: COG4284 UDP-glucose pyrophosphorylase; InterPro IPR002618; KEGG: rba:RB6977 UDP-N-acetylhexosamine pyrophosphorylase; PFAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: UTP--glucose-1-phosphate uridylyltransferase subfamily; PFAM: UTP--glucose-1-phosphate uridylyltransferase
YP_004177527.1	COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: rba:RB11859 PhnP protein homolog-putative hydrolase; SPTR: PhnP protein homolog-putative hydrolase; PFAM: Metallo-beta-lactamase superfamily
YP_004177528.1	KEGG: psl:Psta_2877 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177529.1	COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: plm:Plim_3516 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004177530.1	KEGG: kfl:Kfla_1513 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177531.1	KEGG: vha:VIBHAR_00898 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- D-alanyl-D -alanyl ligase; SPTR: Abhydrolase domain-containing protein
YP_004177532.1	COGs: COG0863 DNA modification methylase; InterPro IPR002941: IPR002052: IPR001091; KEGG: psl:Psta_0519 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: Adenine-specific methyltransferase; PFAM: DNA methylase
YP_004177533.1	InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996
YP_004177534.1	InterPro IPR003590; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain TIGR02996
YP_004177535.1	InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996
YP_004177536.1	InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996
YP_004177537.1	KEGG: ani:AN8715.2 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177538.1	KEGG: dya:Dyak_GE20054 GE20054 gene product from transcript GE20054-RA; SPTR: GE20054
YP_004177539.1	KEGG: srm:SRM_00401 conserved hypothetical protein, secreted; SPTR: Putative uncharacterized protein; PFAM: Cytochrome oxidase maturation protein cbb3-type
YP_004177540.1	COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: srm:SRM_00402 cytochrome c oxidase subunit 1; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Putative cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I
YP_004177541.1	COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468: IPR009056; KEGG: sru:SRU_0323 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome c oxidase mono-heme subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II
YP_004177542.1	InterPro IPR003088: IPR008168: IPR009056; KEGG: caa:Caka_0027 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Cytochrome c class I; PFAM: Cytochrome c
YP_004177543.1	COGs: COG2217 Cation transport ATPase; InterProIPR008250: IPR005834: IPR018303: IPR006416: IPR 001757; KEGG: caa:Caka_0015 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_004177544.1	KEGG: cpi:Cpin_4113 hypothetical protein; SPTR: Bacterial pre-peptidase C-terminal domain family
YP_004177545.1	COGs: COG1032 Fe-S oxidoreductase; InterPro IPR013704: IPR007197: IPR006638: IPR020612; KEGG: psl:Psta_1639 radical SAM domain protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal
YP_004177546.1	InterPro IPR003735; KEGG: ele:Elen_1552 protein of unknown function DUF156; PFAM: protein of unknown function DUF156; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937
YP_004177547.1	COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: sti:Sthe_3396 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004177548.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR003593: IPR017871; KEGG: sti:Sthe_3397 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004177549.1	COGs: COG2998 ABC-type tungstate transport system permease component; KEGG: pth:PTH_0602 ABC-type tungstate transport system, permease component; SPTR: ABC-type tungstate transport system, permease component
YP_004177550.1	KEGG: dhd:Dhaf_1705 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177551.1	InterPro IPR001048; KEGG: swo:Swol_2454 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Aspartate/glutamate/uridylate kinase; PFAM: Amino acid kinase family
YP_004177552.1	COGs: COG0528 Uridylate kinase; InterPro IPR001048; KEGG: swo:Swol_2454 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Uridylate kinase; PFAM: Amino acid kinase family
YP_004177553.1	InterPro IPR001330; KEGG: plm:Plim_0306 A-macroglobulin complement component; PFAM: Prenyltransferase/squalene oxidase; SPTR: A-macroglobulin complement component
YP_004177554.1	KEGG: cse:Cseg_3119 integral membrane sensor hybrid histidine kinase; SPTR: Putative uncharacterized protein
YP_004177555.1	KEGG: rcu:RCOM_1935260 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177556.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR003593: IPR016366; KEGG: psl:Psta_1557 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: MoxR protein; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004177557.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: psl:Psta_1558 von Willebrand factor type A; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58
YP_004177558.1	InterPro IPR011933; KEGG: psl:Psta_0478 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain
YP_004177559.1	InterPro IPR010768: IPR002035; KEGG: plm:Plim_2313 hypothetical protein; PFAM: protein of unknown function DUF1355; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1355)
YP_004177560.1	COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089: IPR004167: IPR001078: IPR003016; KEGG: sth:STH413 pyruvate dehydrogenase E2; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: Pyruvate dehydrogenase E2; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme
YP_004177561.1	COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475: IPR005476; KEGG: mxa:MXAN_4565 2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit; PFAM: Transketolase domain-containing protein; Transketolase central region; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: 2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_004177562.1	COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017; KEGG: mxa:MXAN_4564 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit; PFAM: dehydrogenase E1 component; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); SPTR: 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit; PFAM: Dehydrogenase E1 component
YP_004177564.1	KEGG: psl:Psta_2735 pyrrolo-quinoline quinone; SPTR: Pyrrolo-quinoline quinone
YP_004177565.1	COGs: COG3284 Transcriptional activator of acetoin/glycerol metabolism; InterProIPR003018: IPR002078: IPR002197: IPR003593: IPR 020441; KEGG: afw:Anae109_3045 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: GAF modulated sigma54 specific transcriptional regulator, Fis family; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004177566.1	COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterPro IPR013154: IPR013149: IPR002328; KEGG: rca:Rcas_4434 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: Alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004177567.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160; KEGG: aba:Acid345_1381 aldehyde dehydrogenase (acceptor); PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde dehydrogenase (Acceptor); PFAM: Aldehyde dehydrogenase family
YP_004177568.1	KEGG: act:ACLA_076560 integral membrane protein; SPTR: Integral membrane protein
YP_004177569.1	COGs: COG0464 ATPase of the AAA+ class; InterProIPR003338: IPR004201: IPR003959: IPR003593: IPR 003960: IPR005938; KEGG: mxa:MXAN_2773 AAA family ATPase; PFAM: AAA ATPase central domain protein; AAA ATPase VAT domain protein; cell division protein 48 CDC48 domain 2; PRIAM: Adenosinetriphosphatase; SMART: AAA ATPase; SPTR: ATPase, AAA family; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: ATPase family associated with various cellular activities (AAA); Cell division protein 48 (CDC48), N-terminal domain; Cell division protein 48 (CDC48), domain 2; TIGRFAM: AAA family ATPase, CDC48 subfamily
YP_004177570.1	KEGG: pin:Ping_1246 heat shock protein, HSP20 family protein; SPTR: Heat shock protein, HSP20 family protein
YP_004177571.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789: IPR002078: IPR002197: IPR003593: IPR 020441; KEGG: ank:AnaeK_1971 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004177572.1	COGs: COG2217 Cation transport ATPase; InterProIPR006121: IPR008250: IPR005834: IPR018303: IPR 017969: IPR000150: IPR006403: IPR006416: IPR001757; KEGG: rsc:RCFBP_10117 copper transporting P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Cation-transporting atpase protein; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_004177573.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB4815 arylsulphatase A; PFAM: sulfatase; SPTR: Arylsulphatase A; PFAM: Sulfatase
YP_004177574.1	KEGG: cre:CHLREDRAFT_151536 hypothetical protein; SPTR: Predicted protein
YP_004177575.1	KEGG: psl:Psta_3507 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177576.1	InterPro IPR013428: IPR013427: IPR009056; KEGG: psl:Psta_1994 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004177577.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR007627: IPR007630: IPR014284: IPR000943; KEGG: psl:Psta_2560 RNA polymerase, sigma 32 subunit, RpoH; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004177578.1	KEGG: rba:RB7149 signal peptide; SPTR: Putative uncharacterized protein
YP_004177579.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000253: IPR017442: IPR020635: IPR002290: IPR 017441: IPR008271: IPR000719; KEGG: sro:Sros_3456 serine/threonine protein kinase-like protein; PFAM: Serine/threonine-protein kinase-like domain; Forkhead-associated protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Forkhead-associated protein; SPTR: Serine/threonine protein kinase-like protein; PFAM: Protein kinase domain; FHA domain
YP_004177580.1	COGs: COG2313 Uncharacterized protein involved in pigment biosynthesis; InterPro IPR007342; KEGG: rce:RC1_0645 indigoidine synthase A like protein; PFAM: Indigoidine synthase A family protein; SPTR: Pseudouridine-5'-phosphate glycosidase; PFAM: Indigoidine synthase A like protein
YP_004177581.1	InterPro IPR011138; KEGG: amu:Amuc_0986 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; SPTR: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
YP_004177582.1	COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953: IPR004112: IPR010916: IPR011280; KEGG: chl:Chy400_2032 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup
YP_004177583.1	COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR017900: IPR004489: IPR017896; KEGG: sro:Sros_8456 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; SPTR: Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_004177584.1	InterPro IPR011449: IPR013424; KEGG: lch:Lcho_2328 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004177585.1	KEGG: ncr:NCU02592 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177586.1	COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: psl:Psta_2371 carbon storage regulator, CsrA; PFAM: carbon storage regulator; SPTR: Probable carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_004177587.1	COGs: COG1699 conserved hypothetical protein; InterPro IPR003775; KEGG: gsu:GSU3040 flagellar assembly protein FliW; PFAM: protein of unknown function DUF180; SPTR: Transmembrane protein; PFAM: FliW protein
YP_004177588.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: phe:Phep_0342 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family
YP_004177589.1	COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR004193: IPR006047: IPR006589: IPR011837; KEGG: dak:DaAHT2_1644 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX
YP_004177590.1	InterPro IPR010916; KEGG: dre:100330916 hypothetical protein LOC100330916; SPTR: Cell surface flocculin
YP_004177591.1	KEGG: rso:RS03706 transcription regulator protein; SPTR: Probable transcription regulator protein
YP_004177592.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: afw:Anae109_1425 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004177593.1	COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR003664: IPR012281; KEGG: plm:Plim_2567 fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; SPTR: Phosphate acyltransferase; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX
YP_004177594.1	COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043: IPR004410; KEGG: psl:Psta_1725 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_004177595.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR020904: IPR011284: IPR002347; KEGG: psl:Psta_1726 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_004177596.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_1302 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004177598.1	KEGG: ptr:749912 hypothetical protein LOC749912; SPTR: Copper-exporting ATPase
YP_004177599.1	KEGG: cat:CA2559_07901 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177600.1	KEGG: act:ACLA_046450 IKI3 family protein
YP_004177601.1	KEGG: dpe:Dper_GL18878 GL18878 gene product from transcript GL18878-RA; SPTR: GA17967
YP_004177602.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: tkm:TK90_1969 D-amino-acid transaminase; PFAM: aminotransferase class IV; SPTR: D-amino-acid transaminase; PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase
YP_004177603.1	COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR013766: IPR017937: IPR005746: IPR006662: IPR 017936; KEGG: tal:Thal_1357 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_004177604.1	COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: gme:Gmet_2492 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase
YP_004177605.1	COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: psl:Psta_3009 peptidase U32; PFAM: peptidase U32; SPTR: Peptidase U32; PFAM: Collagenase; Peptidase family U32
YP_004177606.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR006311; KEGG: plm:Plim_1207 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Probable dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004177607.1	COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: bcv:Bcav_1377 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: LamB/YcsF family protein; PFAM: LamB/YcsF family
YP_004177608.1	COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833; KEGG: nde:NIDE1154 putative allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: Putative uncharacterized protein; PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370
YP_004177609.1	KEGG: rba:RB13032 putative permease; SPTR: Putative uncharacterized protein; PFAM: Predicted permease
YP_004177610.1	KEGG: plm:Plim_0653 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177611.1	COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR000583: IPR001347: IPR005855: IPR017932; KEGG: plm:Plim_1342 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; SPTR: Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_004177612.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR001173: IPR013216; KEGG: plm:Plim_3541 glycosyl transferase family 2; PFAM: Methyltransferase type 11; glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Methyltransferase domain; Glycosyl transferase family 2
YP_004177613.1	COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382; KEGG: tad:TRIADDRAFT_49959 hypothetical protein; PFAM: flavoprotein; PRIAM: Phosphopantothenoylcysteine decarboxylase; SPTR: Putative uncharacterized protein; PFAM: Flavoprotein
YP_004177614.1	KEGG: hne:HNE_1503 Tat pathway signal sequence domain-containing protein
YP_004177615.1	COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR002314: IPR004154: IPR004516: IPR015807: IPR 006195; KEGG: rba:RB251 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_004177616.1	COGs: COG0124 Histidyl-tRNA synthetase; InterPro IPR002314: IPR006195; KEGG: hau:Haur_3835 histidine--tRNA ligase; PFAM: tRNA synthetase class II (G H P and S); SPTR: Histidine--tRNA ligase; PFAM: tRNA synthetase class II core domain (G, H, P, S and T)
YP_004177617.1	COGs: COG0040 ATP phosphoribosyltransferase; InterPro IPR013820: IPR018198; KEGG: hau:Haur_2634 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase
YP_004177618.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: rba:RB2626 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_004177619.1	COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR019814: IPR019815: IPR019813: IPR001288; KEGG: psl:Psta_1536 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; SPTR: Translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_004177620.1	InterPro IPR021137: IPR018265: IPR001706; KEGG: pfr:PFREUD_14060 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_004177621.1	COGs: COG0292 Ribosomal protein L20; InterPro IPR005813; KEGG: psl:Psta_0380 ribosomal protein L20; PFAM: ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_004177622.1	COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterPro IPR002319: IPR004529: IPR006195; KEGG: psl:Psta_0379 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; SPTR: Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_004177623.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: psl:Psta_2472 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_004177624.1	InterPro IPR019775; KEGG: rca:Rcas_1659 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177625.1	KEGG: cre:CHLREDRAFT_144070 flagellar associated protein; SPTR: Flagellar associated protein
YP_004177626.1	InterPro IPR003590: IPR014338; KEGG: amd:AMED_5837 leucine-rich repeat-containing protein; SMART: Leucine-rich repeat, ribonuclease inhibitor subtype; SPTR: Putative uncharacterized protein; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996
YP_004177627.1	COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331: IPR002177; KEGG: psl:Psta_1613 ferritin Dps family protein; PFAM: Ferritin Dps family protein; SPTR: Ferritin Dps family protein; PFAM: Ferritin-like domain
YP_004177628.1	COGs: COG0308 Aminopeptidase N; InterPro IPR014782: IPR015211; KEGG: amc:MADE_03140 putative cold-active aminopeptidase; secreted using a signal peptide; PFAM: Peptidase M1 membrane alanine aminopeptidase; Leukotriene A4 hydrolase; SPTR: Peptidase M1 membrane alanine aminopeptidase; PFAM: Leukotriene A4 hydrolase, C-terminal; Peptidase family M1
YP_004177629.1	KEGG: sus:Acid_1892 isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family; Trehalose utilisation
YP_004177630.1	InterPro IPR002035: IPR017802; KEGG: plm:Plim_0632 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; TIGRFAM: VWFA-related Acidobacterial domain protein; PFAM: von Willebrand factor type A domain; TIGRFAM: VWFA-related Acidobacterial domain
YP_004177631.1	InterPro IPR000253; KEGG: pic:PICST_67887 hypothetical protein; PFAM: Forkhead-associated protein; SPTR: Predicted protein; PFAM: FHA domain
YP_004177632.1	KEGG: cai:Caci_6850 type IV secretory pathway VirD4 protein-like protein; SPTR: Type IV secretory pathway VirD4 protein-like protein
YP_004177633.1	COGs: COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase large terminal subunit; InterPro IPR017941: IPR001663; KEGG: chl:Chy400_2532 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] domain
YP_004177634.1	KEGG: mac:MA3330 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177635.1	COGs: COG1331 Highly conserved protein containing a thioredoxin domain; KEGG: psl:Psta_0467 protein of unknown function DUF255; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255
YP_004177636.1	COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148; KEGG: gym:GYMC10_1212 glucosamine-6-phosphate deaminase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine/galactosamine-6-phosphate isomerase; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
YP_004177637.1	KEGG: bte:BTH_II0854 ubiquitin-specific proteinase 31, putative; SPTR: Ubiquitin-specific proteinase 31, putative
YP_004177638.1	InterPro IPR008538; KEGG: rca:Rcas_2194 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820)
YP_004177639.1	InterPro IPR011444: IPR009056; KEGG: rba:RB6511 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004177640.1	COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942: IPR006145: IPR006225; KEGG: sds:SDEG_0791 ribosomal large subunit pseudouridine synthase D; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_004177641.1	COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760; KEGG: chl:Chy400_3622 inositol-phosphate phosphatase; PFAM: inositol monophosphatase; SPTR: Inositol-phosphate phosphatase; PFAM: Inositol monophosphatase family
YP_004177642.1	KEGG: lbz:LbrM27_V2.1500 hypothetical protein; SPTR: Paramyosin
YP_004177643.1	InterPro IPR017504; KEGG: cmi:CMM_1969 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Planctomycetes uncharacterized domain TIGR03067
YP_004177644.1	InterPro IPR014284; KEGG: clj:CLJU_c27510 putative RNA polymerase sigma factor; SPTR: RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004177645.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR002290: IPR017441: IPR008271: IPR 000719; KEGG: rba:RB5593 serine/threonine-protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; SPTR: Serine/threonine-protein kinase; PFAM: Protein kinase domain
YP_004177646.1	COGs: COG0153 Galactokinase; InterProIPR019539: IPR006204: IPR013750: IPR000705: IPR 006203: IPR006206; KEGG: rrs:RoseRS_3819 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; SPTR: Galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase
YP_004177647.1	COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: svi:Svir_35400 NAD-dependent protein deacetylase, SIR2 family; PFAM: Silent information regulator protein Sir2; SPTR: NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family
YP_004177648.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: chl:Chy400_2903 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004177649.1	InterPro IPR001611: IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; PFAM: Leucine Rich Repeat; TIGRFAM: repeat-companion domain TIGR02996
YP_004177650.1	COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR000583: IPR001962: IPR006426: IPR017932; KEGG: psl:Psta_1424 asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; SPTR: Asparagine synthetase [glutamine-hydrolyzing] 1; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_004177651.1	KEGG: plm:Plim_2156 transmembrane prediction; SPTR: Putative uncharacterized protein
YP_004177652.1	COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729: IPR013343; KEGG: tgr:Tgr7_2433 CRISPR-associated Cas1/Cas4 family protein; PFAM: protein of unknown function DUF48; SPTR: CRISPR-associated protein Cas1/Cas4; TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas4; PFAM: Domain of unknown function DUF83; CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated endonuclease Cas1
YP_004177653.1	InterPro IPR021127; KEGG: hoh:Hoch_4853 CRISPR-associated protein Cas2; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2
YP_004177654.1	InterPro IPR019089; KEGG: hoh:Hoch_4849 hypothetical protein; PFAM: CRISPR-associated protein, GSU0054; SPTR: Putative uncharacterized protein; manually curated; PFAM: CRISPR-associated protein, GSU0054 family (Cas_GSU0054)
YP_004177655.1	InterPro IPR005650; KEGG: hoh:Hoch_4716 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family protein; PFAM: Penicillinase repressor
YP_004177656.1	COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: plm:Plim_2219 protein of unknown function DUF151; PFAM: protein of unknown function DUF151; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG1259
YP_004177657.1	InterPro IPR004993; KEGG: plm:Plim_0953 GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter
YP_004177658.1	KEGG: plm:Plim_3438 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; SPTR: Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; PFAM: Prolyl oligopeptidase family
YP_004177659.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031: IPR017441: IPR017568; KEGG: plm:Plim_3120 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_004177660.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031; KEGG: plm:Plim_2562 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_004177661.1	COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: plm:Plim_3121 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: FabA-like domain
YP_004177662.1	InterPro IPR006163: IPR009081; KEGG: plm:Plim_3122 phosphopantetheine-binding protein; PFAM: phosphopantetheine-binding; SPTR: Probable acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_004177663.1	COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: plm:Plim_3124 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Probable hydroxymyristoyl-(Acyl carrier protein) dehydratase; PFAM: FabA-like domain
YP_004177664.1	InterPro IPR002202; KEGG: tro:trd_0931 acylaminoacyl-peptidase; SPTR: Acylaminoacyl-peptidase; PFAM: WD40-like Beta Propeller Repeat
YP_004177665.1	COGs: COG2037 Formylmethanofuran:tetrahydromethanopterin formyltransferase; InterPro IPR002770: IPR014053; KEGG: plm:Plim_0767 formylmethanofuran/tetrahydromethanopterin N-formyltransferase; PFAM: formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr); PRIAM: Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; SPTR: Formyltransferase/hydrolase complex subunit D; TIGRFAM: formylmethanofuran/tetrahydromethanopterin N-formyltransferase; PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase
YP_004177666.1	COGs: COG1229 Formylmethanofuran dehydrogenase subunit A; InterPro IPR013108: IPR012027; KEGG: psl:Psta_0063 formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; SPTR: Formylmethanofuran dehydrogenase subunit A; TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A
YP_004177667.1	COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR011607: IPR013982: IPR002695; KEGG: plm:Plim_1423 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_004177668.1	KEGG: psl:Psta_0848 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177669.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198: IPR002347; KEGG: psl:Psta_0898 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase family protein; PFAM: short chain dehydrogenase
YP_004177670.1	InterPro IPR000209; KEGG: cyt:cce_1400 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Major intracellular serine protease; PFAM: Subtilase family
YP_004177671.1	KEGG: mgl:MGL_2709 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177672.1	COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR003329: IPR004528; KEGG: psl:Psta_0160 3-deoxy-D-manno-octulosonatecytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase
YP_004177673.1	KEGG: cin:100177691 similar to nuclear receptor corepressor; SPTR: TetR-family transcriptional regulator
YP_004177674.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: psl:Psta_4220 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyl transferase (WbnE); PFAM: Glycosyl transferases group 1
YP_004177675.1	COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760: IPR020583: IPR020550; KEGG: plm:Plim_1820 inositol monophosphatase; PFAM: inositol monophosphatase; SPTR: Inositol monophosphatase; PFAM: Inositol monophosphatase family
YP_004177676.1	KEGG: mdo:100028759 similar to Sfi1 homolog, spindle assembly associated (yeast); SPTR: Chloride channel, putative
YP_004177677.1	COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805: IPR015890: IPR005256: IPR019999; KEGG: psl:Psta_3829 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages
YP_004177678.1	KEGG: scl:sce6932 hypothetical protein; SPTR: Myosin tail region-interacting protein MTI1
YP_004177679.1	InterPro IPR003590: IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996
YP_004177680.1	KEGG: cfa:478778 xin actin-binding repeat containing 2; SPTR: Putative uncharacterized protein Xirp2
YP_004177681.1	KEGG: mxa:MXAN_2893 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177682.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011704: IPR003593; KEGG: mxa:MXAN_2895 AAA family ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: ATPase, AAA family; PFAM: AAA domain (dynein-related subfamily)
YP_004177683.1	KEGG: mxa:MXAN_2896 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177684.1	KEGG: mxa:MXAN_2897 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177685.1	COGs: COG0465 ATP-dependent Zn protease; InterPro IPR003959: IPR000642: IPR003593: IPR003960; KEGG: mxa:MXAN_2898 ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; SPTR: ATP-dependent metalloprotease, FtsH family; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA)
YP_004177686.1	KEGG: mxa:MXAN_2899 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177687.1	KEGG: mxa:MXAN_2900 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177688.1	COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: mca:MCA2182 decarboxylase family protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Decarboxylase family protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2
YP_004177689.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR002197: IPR020441; KEGG: psa:PST_3225 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: PAS domain S-box
YP_004177690.1	KEGG: plm:Plim_2336 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177691.1	KEGG: rba:RB10354 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177692.1	COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546: IPR001469; KEGG: psl:Psta_4414 ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: ATP synthase epsilon chain; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_004177693.1	COGs: COG0055 F0F1-type ATP synthase beta subunit; InterProIPR004100: IPR000194: IPR000793: IPR003593: IPR 020003: IPR005722; KEGG: rba:RB10217 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: H(+)-transporting two-sector ATPase; SMART: AAA ATPase; SPTR: F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit
YP_004177694.1	COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: psl:Psta_4412 ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_004177695.1	COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterProIPR004100: IPR000194: IPR000793: IPR020003: IPR 005294; KEGG: psl:Psta_4410 ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SPTR: ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit
YP_004177696.1	COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); InterPro IPR000711; KEGG: plm:Plim_0173 ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; SPTR: Probable ATP synthase delta chain; TIGRFAM: ATP synthase F1, delta subunit; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit
YP_004177697.1	COGs: COG0711 F0F1-type ATP synthase subunit b; InterPro IPR002146: IPR005864; KEGG: plm:Plim_0172 ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: ATP synthase subunit b; TIGRFAM: ATP synthase F0, B subunit; PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b
YP_004177698.1	InterPro IPR002379: IPR020537: IPR000454; KEGG: rbi:RB2501_06560 hypothetical protein; PFAM: H+transporting two-sector ATPase C subunit; SPTR: Putative uncharacterized protein; PFAM: ATP synthase subunit C
YP_004177699.1	COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568; KEGG: plm:Plim_0170 ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; SPTR: ATP synthase subunit a; TIGRFAM: ATP synthase F0, A subunit; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_004177700.1	KEGG: bts:Btus_3241 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177701.1	InterPro IPR003088: IPR009056; KEGG: psl:Psta_3515 hypothetical protein; PFAM: cytochrome c class I; SPTR: Putative uncharacterized protein; PFAM: Cytochrome c
YP_004177702.1	KEGG: psl:Psta_3514 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177703.1	COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: psl:Psta_3513 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I
YP_004177704.1	COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468; KEGG: psl:Psta_3512 cytochrome c oxidase mono-heme subunit/FixO; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome C oxidase mono-heme subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II
YP_004177705.1	KEGG: psl:Psta_3511 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177706.1	KEGG: psl:Psta_3510 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177707.1	COGs: COG2217 Cation transport ATPase; InterProIPR008250: IPR005834: IPR018303: IPR006416: IPR 001757; KEGG: ank:AnaeK_1237 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_004177708.1	COGs: COG2836 conserved hypothetical protein; KEGG: psl:Psta_3508 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177709.1	COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: psl:Psta_0163 exporter of the RND superfamily protein-like protein; SPTR: Exporter of the RND superfamily protein-like protein; PFAM: MMPL family
YP_004177710.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: plm:Plim_0391 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel
YP_004177711.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: plm:Plim_2489 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_004177712.1	InterPro IPR012307: IPR017441; KEGG: rba:RB12035 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel
YP_004177713.1	KEGG: plm:Plim_1608 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177714.1	COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: aca:ACP_1745 hydrolase, carbon-nitrogen family; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Hydrolase, carbon-nitrogen family; PFAM: Carbon-nitrogen hydrolase
YP_004177715.1	COGs: COG2957 Peptidylarginine deiminase; InterPro IPR007466; KEGG: aca:ACP_1746 peptidyl-arginine deiminase family protein; PFAM: Porphyromonas-type peptidyl-arginine deiminase; PRIAM: Agmatine deiminase; SPTR: Agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase
YP_004177717.1	InterPro IPR000866: IPR017936; KEGG: psl:Psta_1644 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004177718.1	InterPro IPR000866: IPR017936; KEGG: plm:Plim_0203 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004177719.1	InterPro IPR013740: IPR017936; KEGG: shn:Shewana3_1881 redoxin domain-containing protein; PFAM: Redoxin domain protein; SPTR: Thioredoxin-like protein; PFAM: AhpC/TSA family
YP_004177720.1	COGs: COG0216 Protein chain release factor A; InterPro IPR005139: IPR000352: IPR004373; KEGG: plm:Plim_0922 peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: Peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_004177721.1	COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848: IPR002052: IPR004556: IPR019874; KEGG: plm:Plim_3974 modification methylase, HemK family; PFAM: methyltransferase small; SPTR: HemK protein; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_004177722.1	COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR010603: IPR013093: IPR019489: IPR003593: IPR 004487; KEGG: psl:Psta_4171 ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent Clp protease ATP-binding subunit clpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_004177723.1	COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: rsh:Rsph17029_1561 cystathionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_004177724.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1032 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; manually curated; PFAM: Glycosyl transferases group 1
YP_004177725.1	KEGG: sti:Sthe_3495 ABC-type sugar transport system periplasmic component-like protein; SPTR: ABC-type sugar transport system periplasmic component-like protein
YP_004177726.1	COGs: COG0527 Aspartokinase; InterProIPR001048: IPR002912: IPR018042: IPR005260: IPR 001341; KEGG: psl:Psta_4303 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase
YP_004177727.1	COGs: COG3635 phosphoglycerate mutase AP superfamily; InterPro IPR019304: IPR006124: IPR004456: IPR013371; KEGG: psl:Psta_4304 proposed homoserine kinase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein; PRIAM: Phosphoglycerate mutase; SPTR: Cofactor-independent phosphoglycerate mutase; TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase
YP_004177728.1	InterPro IPR004564; KEGG: plm:Plim_3543 hypothetical protein; PFAM: outer membrane lipoprotein carrier protein LolA; SPTR: Putative uncharacterized protein; PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: Planctomycetes uncharacterized domain TIGR03009
YP_004177729.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839: IPR004838: IPR001176; KEGG: plm:Plim_0135 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: Aspartate aminotransferase; PFAM: Aminotransferase class I and II
YP_004177730.1	KEGG: plm:Plim_4199 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177731.1	KEGG: bfu:BC1G_14869 hypothetical protein; SPTR: NADH dehydrogenase subunit J
YP_004177733.1	KEGG: zro:ZYRO0A11154g hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177734.1	COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: sus:Acid_1803 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004177735.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tro:trd_1295 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_004177736.1	COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: adg:Adeg_1620 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase
YP_004177737.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: rca:Rcas_2202 oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_004177738.1	KEGG: rpt:Rpal_2847 alginate O-acetyltransferase AlgJ; SPTR: Alginate O-acetyltransferase AlgJ
YP_004177739.1	COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: azl:AZL_019970 membrane bound O-acyl transferase; PFAM: membrane bound O-acyl transferase MBOAT family protein; SPTR: Membrane bound O-acyl transferase MBOAT family protein; PFAM: MBOAT family
YP_004177740.1	KEGG: rrs:RoseRS_1291 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 2
YP_004177741.1	COGs: COG2006 conserved hypothetical protein; KEGG: sus:Acid_1417 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362)
YP_004177742.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyc:PCC7424_4195 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004177743.1	KEGG: sus:Acid_4318 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177744.1	KEGG: cre:CHLREDRAFT_141529 hypothetical protein; SPTR: Predicted protein
YP_004177745.1	COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: dal:Dalk_4700 class I peptide chain release factor; PFAM: Class I peptide chain release factor; SPTR: Class I peptide chain release factor; PFAM: RF-1 domain
YP_004177746.1	InterPro IPR003140; KEGG: sus:Acid_1148 putative esterase; PFAM: phospholipase/Carboxylesterase; SPTR: Putative esterase; PFAM: Phospholipase/Carboxylesterase
YP_004177747.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: psl:Psta_0651 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel
YP_004177748.1	InterPro IPR010496; KEGG: tra:Trad_1254 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080)
YP_004177749.1	KEGG: cfa:609955 hypothetical protein LOC609955; SPTR: Putative uncharacterized protein
YP_004177750.1	InterPro IPR000834; KEGG: sti:Sthe_2480 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SPTR: Putative uncharacterized protein; PFAM: Zinc carboxypeptidase
YP_004177751.1	COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: tte:TTE2694 aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; SPTR: Peptidase family M1, putative; PFAM: Peptidase family M1
YP_004177752.1	COGs: COG1038 Pyruvate carboxylase; InterProIPR005481: IPR005479: IPR005482: IPR000891: IPR 003379: IPR000089: IPR005930: IPR011761: IPR011764: IPR001882; KEGG: psl:Psta_2726 pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxyltransferase; Conserved carboxylase region; biotin/lipoyl attachment domain-containing protein; SPTR: Pyruvate carboxylase; TIGRFAM: pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; HMGL-like; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Conserved carboxylase domain; Biotin-requiring enzyme; TIGRFAM: pyruvate carboxylase
YP_004177753.1	COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013740: IPR017936: IPR017937: IPR006650; KEGG: son:SO_0269 thioredoxin, putative; PFAM: Redoxin domain protein; SPTR: Thioredoxin, putative; PFAM: Redoxin
YP_004177754.1	KEGG: dal:Dalk_3286 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177755.1	COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: hau:Haur_2689 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004177756.1	COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013740: IPR017936; KEGG: mch:Mchl_0201 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin
YP_004177757.1	KEGG: bcl:ABC2207 Zn-dependent protease; SPTR: Zn-dependent protease
YP_004177758.1	InterPro IPR013740: IPR017936: IPR017937; KEGG: mch:Mchl_0201 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin
YP_004177759.1	InterPro IPR011449; KEGG: npu:Npun_F2645 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein
YP_004177761.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001940: IPR001254: IPR001478; KEGG: azl:AZL_e02840 trypsin-like serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin
YP_004177762.1	InterPro IPR000866: IPR017936; KEGG: tgr:Tgr7_0547 peroxiredoxin-like protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Peroxiredoxin-like protein; PFAM: AhpC/TSA family
YP_004177763.1	InterPro IPR011031; KEGG: sus:Acid_4315 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177764.1	InterPro IPR011031; KEGG: sus:Acid_4315 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177765.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: plm:Plim_3483 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004177766.1	KEGG: drt:Dret_1844 methyltransferase type 11; SPTR: Methyltransferase type 11
YP_004177767.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: scl:sce2804 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Putative HlyD-like secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004177768.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: scl:sce2805 hypothetical protein; PFAM: acriflavin resistance protein; SPTR: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_004177769.1	COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439; KEGG: sfu:Sfum_1602 excinuclease ABC, A subunit; PFAM: ABC transporter related; SPTR: Excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit
YP_004177770.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: psl:Psta_3605 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_004177771.1	COGs: COG0283 Cytidylate kinase; InterPro IPR003136: IPR011994; KEGG: alv:Alvin_1646 cytidylate kinase; PFAM: cytidylate kinase region; SPTR: Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_004177772.1	COGs: COG4911 conserved hypothetical protein; InterPro IPR018699; KEGG: tro:trd_A0913 hypothetical protein; PFAM: Protein of unknown function DUF2203; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2203)
YP_004177773.1	KEGG: vsp:VS_II1081 transcriptional regulators, LysR family; SPTR: Transcriptional regulators, LysR family
YP_004177774.1	KEGG: sfu:Sfum_1331 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177775.1	COGs: COG2006 conserved hypothetical protein; InterPro IPR006311; KEGG: hoh:Hoch_0562 protein of unknown function DUF362; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362)
YP_004177776.1	COGs: COG0348 Polyferredoxin; InterPro IPR017896: IPR017900; KEGG: hoh:Hoch_0561 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain
YP_004177777.1	COGs: COG2255 Holliday junction resolvasome helicase subunit; InterProIPR004605: IPR008824: IPR003959: IPR008823: IPR 003593: IPR002464; KEGG: plm:Plim_2430 Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase; SPTR: Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_004177778.1	COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; InterPro IPR000085; KEGG: rba:RB4610 holliday junction DNA helicase RuvA; SPTR: Holliday junction ATP-dependent DNA helicase ruvA
YP_004177779.1	COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: plm:Plim_2866 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004177780.1	COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: plm:Plim_2867 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004177781.1	COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: plm:Plim_2868 NMT1/THI5 like domain protein; SPTR: NMT1/THI5 like domain protein; PFAM: NMT1/THI5 like
YP_004177782.1	COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR001381: IPR013708: IPR006151: IPR011342; KEGG: psl:Psta_4018 shikimate 5-dehydrogenase; PFAM: dehydroquinase class I; Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; SPTR: Shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; Type I 3-dehydroquinase; Shikimate / quinate 5-dehydrogenase; TIGRFAM: 3-dehydroquinate dehydratase, type I; shikimate 5-dehydrogenase
YP_004177783.1	COGs: COG0703 Shikimate kinase; InterPro IPR000623; KEGG: nha:Nham_0490 shikimate kinase; PFAM: shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; PFAM: Shikimate kinase
YP_004177784.1	InterPro IPR000045; KEGG: plm:Plim_1841 peptidase A24A domain protein; PFAM: peptidase A24A prepilin type IV; SPTR: Probable type 4 prepilin-like proteins leader peptide processing enzyme; PFAM: Type IV leader peptidase family
YP_004177785.1	KEGG: blo:BL0962 membrane protein with acetylase function; SPTR: Hypothetical membrane protein with possible acetylase function
YP_004177786.1	KEGG: lma:LmjF35.0520 proteophosphoglycan ppg4; SPTR: Proteophosphoglycan ppg4
YP_004177787.1	KEGG: bfo:BRAFLDRAFT_86726 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177788.1	COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834: IPR006402; KEGG: nde:NIDE1522 putative beta-phosphoglucomutase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_004177789.1	InterPro IPR001789; KEGG: rxy:Rxyl_2770 response regulator receiver protein; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain
YP_004177790.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: plm:Plim_1175 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: Heat shock protein, HSP20 family; PFAM: Hsp20/alpha crystallin family
YP_004177791.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: csa:Csal_3255 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: Small heat shock protein (Class I); PFAM: Hsp20/alpha crystallin family
YP_004177792.1	KEGG: plm:Plim_3756 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177793.1	COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR002292: IPR006130: IPR006132: IPR006131; KEGG: rba:RB5986 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; PRIAM: Ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_004177794.1	COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814: IPR004636; KEGG: psl:Psta_2678 acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; SPTR: Acetylornithine and succinylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases
YP_004177795.1	COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048: IPR004662: IPR011148; KEGG: psl:Psta_2677 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_004177796.1	COGs: COG4747 ACT domain-containing protein; KEGG: psl:Psta_2888 amino acid-binding ACT domain protein; SPTR: Amino acid-binding ACT domain protein
YP_004177797.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020476: IPR000086: IPR020084; KEGG: pru:PRU_0340 ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase; SPTR: ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_004177798.1	COGs: COG1960 Acyl-CoA dehydrogenase; KEGG: psl:Psta_0990 putative isovaleryl-CoA dehydrogenase protein; SPTR: Putative isovaleryl-CoA dehydrogenase protein
YP_004177799.1	COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: plm:Plim_1770 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; PRIAM: Ureidoglycolate lyase; SPTR: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_004177800.1	KEGG: dal:Dalk_0843 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177801.1	COGs: COG0015 Adenylosuccinate lyase; InterPro IPR000362: IPR019468: IPR004769: IPR020557; KEGG: plm:Plim_3831 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase
YP_004177802.1	COGs: COG1402 Uncharacterized protein putative amidase; InterPro IPR003785; KEGG: psl:Psta_1670 creatininase; PFAM: Creatininase; SPTR: Putative uncharacterized protein; PFAM: Creatinine amidohydrolase
YP_004177803.1	COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR000866: IPR017936; KEGG: aba:Acid345_3047 electron transport protein SCO1/SenC; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Electron transport protein SCO1/SenC; PFAM: Copper binding periplasmic protein CusF; SCO1/SenC
YP_004177804.1	KEGG: vap:Vapar_2637 asparaginase; SPTR: Bud20p
YP_004177805.1	KEGG: cya:CYA_0440 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177806.1	COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006140; KEGG: ttr:Tter_1328 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; SPTR: Dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YP_004177807.1	KEGG: ade:Adeh_4091 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004177808.1	KEGG: mav:MAV_3625 hypothetical protein; SPTR: (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
YP_004177809.1	COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR003726: IPR000489: IPR003759: IPR006158: IPR 004223: IPR011822; KEGG: scl:sce5871 methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; SPTR: Methionine synthase; TIGRFAM: methionine synthase; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; 5-methyltetrahydrofolate--homocysteine methyltransferase
YP_004177810.1	COGs: COG0541 Signal recognition particle GTPase; InterProIPR013822: IPR000897: IPR004125: IPR004780: IPR 003593; KEGG: plm:Plim_0181 signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; SPTR: Signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle protein
YP_004177811.1	COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: psl:Psta_0743 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_004177812.1	COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006137: IPR006138; KEGG: psl:Psta_0742 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit
YP_004177813.1	COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR001268: IPR010218: IPR020396; KEGG: plm:Plim_3858 NADH dehydrogenase (ubiquinone) 30 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: NADH dehydrogenase (Ubiquinone) 30 kDa subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C
YP_004177814.1	COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR001135; KEGG: psl:Psta_0740 NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase (Quinone); PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit
YP_004177815.1	COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: psl:Psta_0739 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: NADH dehydrogenase (Ubiquinone) 24 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_004177816.1	COGs: COG3386 Gluconolactonase; InterPro IPR005511: IPR013658; KEGG: plm:Plim_3928 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; PRIAM: Gluconolactonase; SPTR: Gluconolactonase (Precursor); PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_004177817.1	COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterProIPR006318: IPR008731: IPR008279: IPR000121: IPR 018274; KEGG: psl:Psta_1586 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; SPTR: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_004177818.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160; KEGG: cai:Caci_5460 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family
YP_004177819.1	InterPro IPR001911; KEGG: psl:Psta_3640 ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21
YP_004177820.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: pab:PAB1765 menaquinone biosynthesis methlytransferase related; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_004177821.1	COGs: COG3693 Beta-1 4-xylanase; KEGG: plm:Plim_3847 glycoside hydrolase family 10; SPTR: Glycoside hydrolase family 10
YP_004177822.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: mta:Moth_1954 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004177823.1	COGs: COG0460 Homoserine dehydrogenase; InterProIPR005106: IPR001342: IPR002912: IPR016204: IPR 019811; KEGG: rba:RB8510 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; SPTR: Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain
YP_004177825.1	KEGG: rpb:RPB_3001 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177826.1	InterPro IPR012902: IPR001120; KEGG: psl:Psta_1428 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004177827.1	InterPro IPR003369; KEGG: plm:Plim_2724 twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Putative Sec-independent protein translocase component; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_004177828.1	COGs: COG1826 Sec-independent protein secretion pathway components; InterPro IPR003369: IPR006312; KEGG: dge:Dgeo_1396 twin arginine-targeting protein translocase; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Putative Sec-independent protein translocase component; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_004177829.1	COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR018158: IPR004095: IPR012947: IPR002314: IPR 004154: IPR002320: IPR006195; KEGG: plm:Plim_4204 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; SPTR: Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase
YP_004177830.1	COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001789: IPR010822: IPR001932; KEGG: sus:Acid_4295 response regulator receiver modulated serine phosphatase; PFAM: Stage II sporulation protein E; response regulator receiver; SMART: protein phosphatase 2C domain protein; response regulator receiver; SPTR: Response regulator receiver modulated serine phosphatase; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE)
YP_004177831.1	InterPro IPR003594; KEGG: azl:AZL_018000 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004177832.1	InterPro IPR002645: IPR003658; KEGG: mbn:Mboo_1159 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004177833.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR016366; KEGG: plm:Plim_4014 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004177834.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: psl:Psta_1578 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58
YP_004177835.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: plm:Plim_1293 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase domain protein; PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488)
YP_004177836.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: plm:Plim_4196 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1
YP_004177837.1	KEGG: bge:BC1002_5539 mammalian cell entry related domain protein; SPTR: Putative uncharacterized protein
YP_004177838.1	COGs: COG1201 Lhr-like helicase; InterProIPR011545: IPR001650: IPR013701: IPR014001: IPR 014021: IPR017170; KEGG: tga:TGAM_0576 ATP-dependent helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent helicase, lhr-like protein (Lhr); PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase
YP_004177839.1	KEGG: tca:100141858 similar to broad-complex; SPTR: ORF87
YP_004177840.1	COGs: COG2041 Sulfite oxidase; InterPro IPR008335: IPR000572: IPR005066: IPR017909; KEGG: sus:Acid_7248 sulfite dehydrogenase (cytochrome) subunit SorA apoprotein; PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; SPTR: Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain
YP_004177841.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pca:Pcar_2305 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1
YP_004177842.1	InterPro IPR013766: IPR017936; KEGG: rba:RB5782 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Probable thioredoxin; PFAM: Thioredoxin
YP_004177843.1	COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: psl:Psta_4489 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II
YP_004177844.1	COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: psl:Psta_1753 glutamine synthetase catalytic region; PFAM: glutamine synthetase catalytic region; SPTR: Glutamine synthetase, type III; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal
YP_004177845.1	KEGG: mgi:Mflv_4416 hypothetical protein; SPTR: Transcription factor TFIID complex subunit Taf11
YP_004177846.1	InterPro IPR011506: IPR000209: IPR011459: IPR006626; KEGG: mar:MAE_50880 hypothetical protein; PFAM: protein of unknown function DUF1565; Planctomycete extracellular domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Peptidase families S8 and S53 domain protein; PFAM: Protein of unknown function (DUF1565); Subtilase family
YP_004177847.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005833: IPR005834: IPR006402; KEGG: spe:Spro_4879 phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; Epoxide hydrolase N-terminal domain-like phosphatase
YP_004177848.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR001270: IPR004176: IPR003959: IPR013093: IPR 019489: IPR017730: IPR003593: IPR018368; KEGG: psl:Psta_0837 ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_004177849.1	COGs: COG0443 Molecular chaperone; InterPro IPR012725: IPR001023: IPR013126: IPR018181; KEGG: plm:Plim_2047 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_004177850.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036: IPR004764; KEGG: sfu:Sfum_3922 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: acriflavin resistance protein; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_004177851.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dvm:DvMF_0035 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004177852.1	InterPro IPR001647; KEGG: gsu:GSU2666 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_004177853.1	COGs: COG0077 Prephenate dehydratase; InterProIPR020822: IPR001086: IPR002912: IPR010957: IPR 002701: IPR008242; KEGG: plm:Plim_2048 prephenate dehydratase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein; SPTR: Prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: Prephenate dehydratase; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2
YP_004177854.1	COGs: COG0673 dehydrogenase and related protein; InterProIPR000683: IPR004104: IPR006311: IPR017909: IPR 017970; KEGG: sus:Acid_3950 oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_004177855.1	KEGG: rba:RB8980 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559)
YP_004177856.1	KEGG: rba:RB8980 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559)
YP_004177857.1	KEGG: lbz:LbrM22_V2.1600 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177858.1	KEGG: dac:Daci_4306 NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004177859.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR002290: IPR020635: IPR000719: IPR 001789: IPR008271; KEGG: psl:Psta_1859 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; Response regulator receiver domain
YP_004177860.1	COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504; KEGG: plm:Plim_1587 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
YP_004177861.1	KEGG: psl:Psta_0112 glycosyl transferase family 39; SPTR: Putative uncharacterized protein
YP_004177862.1	InterPro IPR001440: IPR019734: IPR013026: IPR019794; KEGG: ade:Adeh_2705 response regulator receiver; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Response regulator receiver
YP_004177863.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: sfu:Sfum_3136 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004177864.1	COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050: IPR005101; KEGG: aca:ACP_1875 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; SPTR: Deoxyribodipyrimidine photolyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: photolyase PhrII
YP_004177865.1	KEGG: rba:RB5663 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1570)
YP_004177866.1	COGs: COG0515 Serine/threonine protein kinase; InterPro IPR017442: IPR020635: IPR002290: IPR000719; KEGG: plm:Plim_1234 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain
YP_004177867.1	KEGG: rba:RB4576 signal peptide; SPTR: Putative uncharacterized protein
YP_004177868.1	KEGG: plm:Plim_0783 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177869.1	KEGG: plm:Plim_3460 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177870.1	COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR005770; KEGG: cyb:CYB_0011 putative phosphonate ABC transporter, phosphonate-binding protein; SPTR: Putative phosphonate ABC transporter, phosphonate-binding protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
YP_004177871.1	COGs: COG0481 Membrane GTPase LepA; InterProIPR006297: IPR000795: IPR004161: IPR000640: IPR 013842: IPR005225; KEGG: plm:Plim_3466 GTP-binding protein LepA; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein lepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_004177872.1	InterPro IPR000223: IPR019759: IPR019757: IPR019758; KEGG: plm:Plim_1125 peptidase S24 and S26 domain protein; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Probable signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_004177873.1	InterPro IPR000223: IPR019759: IPR019757: IPR019758; KEGG: plm:Plim_1125 peptidase S24 and S26 domain protein; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Peptidase S24 and S26 domain protein; PFAM: Peptidase S24-like
YP_004177874.1	COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: psl:Psta_0620 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004177875.1	InterPro IPR001330: IPR004155; KEGG: psl:Psta_2719 hypothetical protein; PFAM: Prenyltransferase/squalene oxidase; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Putative uncharacterized protein
YP_004177876.1	COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: plm:Plim_1356 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; SPTR: Malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase
YP_004177877.1	COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: plm:Plim_0702 aldose 1-epimerase; PFAM: Aldose 1-epimerase; SPTR: Aldose 1-epimerase; PFAM: Aldose 1-epimerase
YP_004177878.1	KEGG: mxa:MXAN_2290 putative lipoprotein; SPTR: Putative lipoprotein
YP_004177879.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004177880.1	COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; InterPro IPR003265; KEGG: msv:Mesil_1125 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: Probable DNA-3-methyladenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein
YP_004177881.1	COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600: IPR002731; KEGG: psl:Psta_4719 ROK family protein; PFAM: ROK family protein; ATPase BadF/BadG/BcrA/BcrD type; SPTR: Glucokinase; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase)
YP_004177882.1	COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: plm:Plim_1339 iojap-like protein; PFAM: Iojap-related protein; SPTR: Iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein
YP_004177883.1	COGs: COG0018 Arginyl-tRNA synthetase; InterProIPR001278: IPR015945: IPR005148: IPR008909: IPR 001800: IPR001412; KEGG: psl:Psta_0209 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; DALR anticodon binding domain protein; PRIAM: Arginine--tRNA ligase; SPTR: Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_004177884.1	COGs: COG3391 conserved hypothetical protein; InterPro IPR011964: IPR009056; KEGG: psl:Psta_0767 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat
YP_004177885.1	KEGG: psl:Psta_2460 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177886.1	KEGG: tai:Taci_1732 protein of unknown function UPF0118; SPTR: Phosphatidylglycerophosphatase, putative
YP_004177887.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: plm:Plim_2211 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Forkhead-associated protein; PFAM: FHA domain
YP_004177888.1	KEGG: cbt:CLH_0103 prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase
YP_004177889.1	InterPro IPR005632; KEGG: plm:Plim_0920 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like)
YP_004177890.1	COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; InterPro IPR010084: IPR004463: IPR013114; KEGG: gau:GAU_1588 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: FabA-like domain; UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
YP_004177891.1	COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR001451: IPR010137: IPR018357; KEGG: psl:Psta_3189 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR:Acyl-(Acyl-carrier-protein)--UDP-N-acetylgluco samineO-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_004177892.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: plm:Plim_0917 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Similar to 1-carboxy-3-chloro-3,4-dihydroxycyclohexa-1, 5-diene dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_004177893.1	KEGG: rba:RB2304 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177894.1	COGs: COG1985 Pyrimidine reductase riboflavin biosynthesis; InterProIPR002125: IPR002734: IPR004794: IPR011549: IPR 016192; KEGG: psl:Psta_1878 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: Riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; diaminohydroxyphosphoribosylaminopyrimidine deaminase
YP_004177895.1	InterPro IPR013428: IPR013427: IPR009056; KEGG: psl:Psta_0498 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004177896.1	COGs: COG0274 Deoxyribose-phosphate aldolase; InterPro IPR002915: IPR011343; KEGG: rba:RB6729 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: Deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_004177897.1	InterPro IPR010496; KEGG: caa:Caka_0473 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080)
YP_004177898.1	KEGG: rba:RB6409 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3500)
YP_004177899.1	InterPro IPR010869: IPR017909; KEGG: psl:Psta_2356 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004177900.1	InterPro IPR000638: IPR018493; KEGG: sma:SAV_1884 gas vesicle synthesis protein; PFAM: gas vesicle protein GVPa; SPTR: Gas vesicle protein; PFAM: Gas vesicle protein
YP_004177901.1	InterPro IPR001305; KEGG: sen:SACE_7208 molecular chaperone; PFAM: DnaJ central domain protein; SPTR: Molecular chaperone
YP_004177902.1	InterPro IPR007805; KEGG: aba:Acid345_2406 gas vesicle K; PFAM: Gas vesicle K; SPTR: Gas vesicle protein K; PFAM: Gas vesicle protein K
YP_004177903.1	InterPro IPR000638; KEGG: pin:Ping_1260 gas vesicle protein GVPa; PFAM: gas vesicle protein GVPa; SPTR: Gas vesicle protein GVPa; PFAM: Gas vesicle protein
YP_004177904.1	KEGG: lbc:LACBIDRAFT_304787 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177905.1	KEGG: pin:Ping_1259 gas vesicle protein G; SPTR: Gas vesicle protein G; PFAM: Gas vesicle protein G
YP_004177906.1	InterPro IPR009430; KEGG: mxa:MXAN_2769 GvpL/GvpF family gas vesicle protein; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: Putative gas vesicle synthesis GvpLGvpF; PFAM: Gas vesicle synthesis protein GvpL/GvpF
YP_004177907.1	KEGG: xcv:XCV2837 translation initiation factor IF-2; SPTR: Translation initiation factor IF-2
YP_004177908.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011704: IPR013462: IPR003593; KEGG: cya:CYA_0826 gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: Gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN; PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; TIGRFAM: gas vesicle protein GvpN
YP_004177909.1	KEGG: nca:Noca_1794 hypothetical protein; SPTR: Predicted protein
YP_004177910.1	InterPro IPR000638: IPR018493; KEGG: pin:Ping_1748 gas vesicle synthesis protein GvpA; PFAM: gas vesicle protein GVPa; SPTR: Gas vesicle protein; PFAM: Gas vesicle protein
YP_004177911.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: syx:SynWH7803_2446 short-chain dehydrogenase/reductase of unknown specificity; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase (SDR) superfamily protein; PFAM: short chain dehydrogenase
YP_004177912.1	COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: mca:MCA2806 pyridoxal-dependent decarboxylase domain-containing protein; PFAM: Pyridoxal-dependent decarboxylase; SPTR: Pyridoxal-dependent decarboxylase domain protein; PFAM: Pyridoxal-dependent decarboxylase conserved domain
YP_004177913.1	InterPro IPR011449: IPR013424; KEGG: cte:CT1750 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Endonuclease/exonuclease/phosphatase
YP_004177914.1	InterPro IPR007312; KEGG: bts:Btus_0523 40-residue YVTN family beta-propeller repeat protein; PFAM: phosphoesterase; SPTR: Phosphoesterase; PFAM: Phosphoesterase family
YP_004177915.1	KEGG: bta:539055 tetraspanin 14; SPTR: Tetraspanin 14
YP_004177916.1	COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: plm:Plim_2995 Nuz; SPTR: Putative uncharacterized protein
YP_004177917.1	COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468: IPR009056; KEGG: min:Minf_1953 Cbb3-type cytochrome oxidase, cytochrome c subunit; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome C oxidase, mono-heme subunit/FixO superfamily; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II
YP_004177918.1	KEGG: ncr:NCU03263 similar to transmembrane protein; SPTR: Peptidoglycan-binding LysM
YP_004177919.1	KEGG: scl:sce7589 hypothetical protein; SPTR: Conserved hypothetical membrane protein
YP_004177920.1	InterPro IPR009056; KEGG: caa:Caka_0021 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome c
YP_004177921.1	KEGG: scl:sce7587 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3341)
YP_004177922.1	COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: rmr:Rmar_0223 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: Polysulphide reductase NrfD; PFAM: Polysulphide reductase, NrfD
YP_004177923.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896; KEGG: ote:Oter_3934 Fe-S-cluster-containing hydrogenase components 1-like protein; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit
YP_004177924.1	InterPro IPR002322: IPR011031; KEGG: caa:Caka_0017 cytochrome c family protein; SPTR: Cytochrome c family protein; PFAM: Class III cytochrome C family; Cytochrome c552
YP_004177925.1	KEGG: aha:AHA_1433 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177926.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: plm:Plim_2198 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_004177927.1	COGs: COG0162 Tyrosyl-tRNA synthetase; InterPro IPR002307: IPR002305; KEGG: plm:Plim_2197 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_004177928.1	InterPro IPR003675; KEGG: rba:RB10877 hypothetical protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; PFAM: CAAX amino terminal protease family
YP_004177929.1	KEGG: cci:CC1G_00588 GTPase activating protein; SPTR: GTPase activating protein
YP_004177930.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR005532: IPR020635: IPR002290: IPR 000719: IPR008271; KEGG: hoh:Hoch_0080 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme
YP_004177931.1	COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076; KEGG: ank:AnaeK_0718 general secretion pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain
YP_004177932.1	KEGG: nfi:NFIA_014140 myosin class II heavy chain (MHC), putative; SPTR: GI11144
YP_004177933.1	KEGG: plm:Plim_2619 SH3 type 3 domain protein; SPTR: Putative uncharacterized protein
YP_004177934.1	COGs: COG1163 GTPase; InterPro IPR006073: IPR002917: IPR004095: IPR005225; KEGG: psl:Psta_1013 GTP-binding protein HSR1-related protein; PFAM: GTP-binding protein HSR1-related; TGS domain-containing protein; SPTR: GTP-binding protein HSR1-related protein; TIGRFAM: small GTP-binding protein; PFAM: GTPase of unknown function; TGS domain; TIGRFAM: small GTP-binding protein domain
YP_004177935.1	InterPro IPR003594: IPR016160; KEGG: sus:Acid_7798 response regulator receiver protein; PFAM: ATP-binding region ATPase domain protein; SPTR: Response regulator receiver protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004177936.1	KEGG: rba:RB1138 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Sugar-specific transcriptional regulator TrmB
YP_004177937.1	COGs: COG3002 conserved hypothetical protein; InterPro IPR018752; KEGG: chl:Chy400_1924 hypothetical protein; PFAM: Protein of unknown function DUF2309; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2309)
YP_004177938.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003916: IPR018393: IPR001516: IPR001750; KEGG: bra:BRADO2284 putative NADH dehydrogenase (NADH quinone oxidoreductase)(nuoL3-like); PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Putative NADH dehydrogenase (NADH quinone oxidoreductase)(NuoL3-like); PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_004177939.1	COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017: IPR017896: IPR017900; KEGG: psl:Psta_2647 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich domain
YP_004177940.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094: IPR004113: IPR016166; KEGG: psl:Psta_2648 FAD linked oxidase domain protein; PFAM: FAD linked oxidase domain protein; SPTR: Glycolate oxidase subunit; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_004177941.1	KEGG: act:ACLA_069350 SH3 domain protein; SPTR: SH3 domain protein; manually curated
YP_004177942.1	InterPro IPR011449: IPR013424; KEGG: sus:Acid_6948 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004177943.1	COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR003042: IPR006076; KEGG: plm:Plim_3358 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: Thi4 family; FAD dependent oxidoreductase
YP_004177944.1	COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR000253: IPR003018: IPR010822: IPR001932; KEGG: nhl:Nhal_1223 stage II sporulation E family protein; PFAM: Stage II sporulation protein E; GAF domain protein; Forkhead-associated protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; Forkhead-associated protein; SPTR: Stage II sporulation E family protein; PFAM: GAF domain; Stage II sporulation protein E (SpoIIE); FHA domain
YP_004177945.1	KEGG: scl:sce5120 protein kinase; SPTR: Serine/threonine protein kinase
YP_004177946.1	KEGG: rba:RB12189 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177947.1	COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: rba:RB5038 monoamine oxidase regulatory protein; PFAM: MaoC domain protein dehydratase; SPTR: Similar to monoamine oxidase regulatory protein; PFAM: MaoC like domain
YP_004177948.1	KEGG: hmu:Hmuk_2248 O-succinylbenzoate-CoA ligase; SPTR: Putative uncharacterized protein Sb07g024970
YP_004177949.1	KEGG: cur:cur_1975 major facilitator superfamily permease; SPTR: Putative permease of the major facilitator superfamily
YP_004177950.1	KEGG: plm:Plim_0531 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177951.1	COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804; KEGG: cbl:CLK_3621 isocitrate/isopropylmalate family dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; SPTR: Isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004177952.1	COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125: IPR016192; KEGG: psl:Psta_0541 CMP/dCMP deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: CMP/dCMP deaminase zinc-binding protein; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_004177953.1	COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834: IPR006402; KEGG: mxa:MXAN_2697 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_004177954.1	COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192: IPR016454; KEGG: cre:CHLREDRAFT_191269 cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; PFAM: Aminotransferase class-V
YP_004177955.1	KEGG: psl:Psta_3746 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177956.1	InterPro IPR003343: IPR011444; KEGG: psl:Psta_3533 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004177957.1	COGs: COG4102 conserved hypothetical protein; InterPro IPR010869: IPR017909; KEGG: psl:Psta_2015 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004177958.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sus:Acid_3710 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel
YP_004177959.1	COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR013216; KEGG: nve:NEMVE_v1g164983 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Predicted protein; PFAM: Methyltransferase domain
YP_004177960.1	KEGG: cai:Caci_3165 ricin B lectin; SPTR: Putative uncharacterized protein
YP_004177961.1	KEGG: ptm:GSPATT00000501001 hypothetical protein; SPTR: Chromosome undetermined scaffold_1, whole genome shotgun sequence
YP_004177962.1	COGs: COG0344 membrane protein; InterPro IPR003811: IPR020788; KEGG: plm:Plim_0829 protein of unknown function DUF205; PFAM: protein of unknown function DUF205; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase
YP_004177963.1	COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835; KEGG: rrs:RoseRS_4077 nucleotidyl transferase; PFAM: Nucleotidyl transferase; SPTR: Nucleotidyl transferase; PFAM: Nucleotidyl transferase
YP_004177964.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sfu:Sfum_0373 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Probable glycosyltransferase; PFAM: Glycosyl transferases group 1
YP_004177965.1	KEGG: pca:Pcar_1265 putative LPS biosynthesis enzyme; SPTR: Mn2+-dependent serine/threonine protein kinase; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family
YP_004177966.1	KEGG: tcx:Tcr_2091 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177967.1	COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347; KEGG: plm:Plim_1528 sugar isomerase (SIS); PFAM: sugar isomerase (SIS); SPTR: Sugar isomerase (SIS); PFAM: SIS domain
YP_004177968.1	COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: plm:Plim_1388 ROK family protein; PFAM: ROK family protein; SPTR: ROK protein; PFAM: ROK family
YP_004177969.1	InterPro IPR018062; KEGG: syf:Synpcc7942_0287 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177970.1	COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR004013: IPR003141; KEGG: cbf:CLI_3812 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: PHP domain protein; manually curated; PFAM: PHP domain
YP_004177971.1	COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: bse:Bsel_2310 rhomboid protease; PFAM: Rhomboid family protein; SPTR: Rhomboid protease; PFAM: Rhomboid family
YP_004177972.1	COGs: COG4293 conserved hypothetical protein; InterPro IPR014923; KEGG: dra:DR_0097 hypothetical protein; PFAM: protein of unknown function DUF1802; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1802)
YP_004177973.1	COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR006168: IPR011128: IPR006109; KEGG: plm:Plim_1353 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_004177974.1	COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: hau:Haur_0806 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004177975.1	COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase); InterPro IPR002891: IPR002650; KEGG: cag:Cagg_1550 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; PFAM: ATP-sulfurylase; adenylylsulfate kinase; PRIAM: Sulfate adenylyltransferase., Adenylyl-sulfate kinase; SPTR: Sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; adenylylsulfate kinase; PFAM: ATP-sulfurylase; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); ATP sulphurylase
YP_004177976.1	COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: psl:Psta_0335 transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator)
YP_004177977.1	COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500: IPR004511; KEGG: psl:Psta_0334 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; PRIAM: Phosphoadenylyl-sulfate reductase (thioredoxin); SPTR: Phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin)
YP_004177978.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR003661: IPR003594: IPR005467; KEGG: psl:Psta_2875 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004177979.1	COGs: COG1048 Aconitase A; InterPro IPR001030: IPR000573: IPR006249: IPR018136; KEGG: chl:Chy400_3402 aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein; SPTR: Aconitate hydratase 1; TIGRFAM: aconitate hydratase 1; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_004177980.1	COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017: IPR017597; KEGG: phe:Phep_0171 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: Pyruvate dehydrogenase; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit
YP_004177981.1	COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475: IPR005476; KEGG: scl:sce3801 pyruvate dehydrogenase (acetyl-transferring); PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Pyruvate dehydrogenase (Acetyl-transferring); PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_004177982.1	COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089: IPR004167: IPR001078: IPR003016; KEGG: ace:Acel_0588 dehydrogenase catalytic domain-containing protein; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: Catalytic domain of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
YP_004177983.1	InterPro IPR001901; KEGG: plm:Plim_0565 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177984.1	KEGG: plm:Plim_2152 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177985.1	KEGG: spu:576647 receptor for egg jelly protein; SPTR: Receptor for egg jelly protein 9
YP_004177986.1	COGs: COG2501 conserved hypothetical protein; InterPro IPR002942; KEGG: vfm:VFMJ11_A0298 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177987.1	InterPro IPR003825; KEGG: plm:Plim_1277 colicin V production protein; PFAM: Colicin V production protein; SPTR: Colicin V production protein; PFAM: Colicin V production protein
YP_004177988.1	KEGG: psl:Psta_2453 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177989.1	KEGG: plm:Plim_2412 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177990.1	InterPro IPR002645: IPR003658; KEGG: plm:Plim_0153 anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Putative uncharacterized protein; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004177991.1	COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: mmh:Mmah_1165 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Cytoplasmic membrane protein; PFAM: Rhomboid family
YP_004177992.1	InterPro IPR000182; KEGG: srm:SRM_03016 acetyltransferase, GNAT family; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; PFAM: Acetyltransferase (GNAT) family
YP_004177993.1	KEGG: pti:PHATRDRAFT_43752 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004177994.1	KEGG: cwo:Cwoe_4269 FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase
YP_004177995.1	KEGG: cpc:Cpar_0045 F0F1 ATP synthase subunit beta; SPTR: Putative uncharacterized protein
YP_004177996.1	InterPro IPR006186: IPR004843; KEGG: plm:Plim_0868 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_004177997.1	COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: plm:Plim_3297 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: FabA-like domain
YP_004177998.1	COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; InterPro IPR003358; KEGG: plm:Plim_3296 tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase
YP_004177999.1	KEGG: psl:Psta_1696 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178000.1	COGs: COG2319 FOG: WD40 repeat; InterProIPR020472: IPR019781: IPR001680: IPR019782: IPR 017986: IPR019775; KEGG: psl:Psta_3242 WD-40 repeat protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C
YP_004178001.1	KEGG: psl:Psta_4371 hypothetical protein; SPTR: Probable serine proteinase, subtilase family protein
YP_004178002.1	InterPro IPR004238; KEGG: mgr:MGG_06862 hypothetical protein; PFAM: Late embryogenesis abundant protein; SPTR: Putative uncharacterized protein; PFAM: Late embryogenesis abundant protein
YP_004178003.1	KEGG: gtn:GTNG_0567 ABC transporter (permease) EscB; SPTR: ABC transporter (Permease) EscB
YP_004178004.1	COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; KEGG: srm:SRM_00402 cytochrome c oxidase subunit 1; SPTR: Putative cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_004178005.1	InterPro IPR009056; KEGG: psl:Psta_2931 cytochrome c class I; SPTR: Probable PbrT protein-possibly cytochrome c; PFAM: Cytochrome c
YP_004178006.1	InterPro IPR003088: IPR009056; KEGG: psl:Psta_2931 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Cytochrome c class I; PFAM: Cytochrome c
YP_004178007.1	COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR002429: IPR011759: IPR014222: IPR001505; KEGG: psl:Psta_2930 cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; SPTR: Cytochrome c oxidase subunit 2; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II
YP_004178008.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: psl:Psta_2929 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; SPTR: Cytochrome c oxidase subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I
YP_004178009.1	COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; KEGG: rba:RB11934 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome oxidase assembly protein
YP_004178010.1	COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); InterPro IPR006369: IPR000537; KEGG: plm:Plim_2955 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; SPTR: Protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase
YP_004178011.1	COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298: IPR020606; KEGG: hwa:HQ2352A cytochrome-C-like terminal oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome-c-like terminal oxidase, subunit III; PFAM: Cytochrome c oxidase subunit III
YP_004178012.1	COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814: IPR005815; KEGG: dvu:DVU2559 adenosylmethionine--8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; SPTR: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase
YP_004178013.1	COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: hoh:Hoch_6892 dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase
YP_004178014.1	KEGG: lbz:LbrM34_V2.0530 proteophosphoglycan ppg4; SPTR: Proteophosphoglycan ppg4
YP_004178015.1	KEGG: rde:RD1_1585 VBCS repeat-containing protein; SPTR: VCBS repeat domain protein
YP_004178016.1	InterPro IPR013424; KEGG: sml:Smlt1009 putative glycine-rich autotransporter protein; SPTR: Putative glycine-rich autotransporter protein
YP_004178017.1	InterPro IPR017481; KEGG: nca:Noca_3554 TPR repeat-containing protein; SPTR: TPR repeat; TIGRFAM: conserved hypothetical protein TIGR03032
YP_004178018.1	COGs: COG3914 O-linked N-acetylglucosamine transferase SPINDLY family; InterPro IPR001440: IPR019734: IPR013026; KEGG: ote:Oter_3958 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat
YP_004178019.1	COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: psl:Psta_1377 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC
YP_004178020.1	COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: aca:ACP_0275 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_004178021.1	COGs: COG1377 Flagellar biosynthesis pathway component FlhB; KEGG: aac:Aaci_1409 flagellar biosynthetic protein FlhB; SPTR: Flagellar biosynthetic protein FlhB; PFAM: FlhB HrpN YscU SpaS Family
YP_004178022.1	COGs: COG0682 Prolipoprotein diacylglyceryltransferase; InterPro IPR001640; KEGG: plm:Plim_2253 prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_004178023.1	COGs: COG0853 Aspartate 1-decarboxylase; InterPro IPR003190; KEGG: adg:Adeg_1875 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_004178024.1	COGs: COG0414 Panthothenate synthetase; InterPro IPR003721; KEGG: adg:Adeg_1876 pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantoate/beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; manually curated; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase
YP_004178025.1	COGs: COG3411 Ferredoxin; InterPro IPR009737; KEGG: psl:Psta_4693 ferredoxin-like protein; PFAM: Sucraseferredoxin family protein; SPTR: Ferredoxin, 2Fe-2S; PFAM: Sucrase/ferredoxin-like
YP_004178026.1	InterPro IPR018392: IPR002482; KEGG: dpo:Dpse_GA28568 GA28568 gene product from transcript GA28568-RA; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: GA28568; PFAM: LysM domain
YP_004178027.1	COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: psl:Psta_2958 S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_004178028.1	SPTR: Hemolysin III family channel protein
YP_004178029.1	COGs: COG3828 conserved hypothetical protein; InterPro IPR006311: IPR017909; KEGG: ote:Oter_2820 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation
YP_004178030.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: aba:Acid345_0284 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATPase subunit; PFAM: ABC transporter
YP_004178031.1	COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525: IPR000412; KEGG: aba:Acid345_0285 ABC multidrug efflux pump, inner membrane subunit; PFAM: ABC-2 type transporter; SPTR: ABC multidrug efflux pump, inner membrane subunit; PFAM: ABC-2 type transporter
YP_004178032.1	KEGG: dmo:Dmoj_GI11778 GI11778 gene product from transcript GI11778-RA; SPTR: Flagelliform silk protein
YP_004178034.1	InterPro IPR007055; KEGG: rba:RB8487 signal peptide; PFAM: transport-associated; SPTR: Putative uncharacterized protein; PFAM: Putative phospholipid-binding domain
YP_004178035.1	InterPro IPR000073: IPR002471; KEGG: mma:MM_3198 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Putative uncharacterized protein; PFAM: X-Pro dipeptidyl-peptidase (S15 family)
YP_004178036.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR020635: IPR002290: IPR000719: IPR 017441: IPR008271; KEGG: tte:TTE1500 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Protein tyrosine kinase family; PFAM: Protein kinase domain
YP_004178037.1	InterPro IPR018580; KEGG: psl:Psta_4419 hypothetical protein; PFAM: Protein of unknown function, membrane YfhO; SPTR: Putative uncharacterized protein; PFAM: Bacterial membrane protein YfhO
YP_004178038.1	COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852: IPR009056: IPR011031; KEGG: psl:Psta_3944 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase
YP_004178039.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000253: IPR000160: IPR012307; KEGG: sus:Acid_4909 xylose isomerase domain-containing protein; PFAM: GGDEF domain containing protein; Forkhead-associated protein; Xylose isomerase domain-containing protein TIM barrel; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Xylose isomerase domain protein TIM barrel; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Xylose isomerase-like TIM barrel; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004178040.1	InterPro IPR001845; KEGG: plm:Plim_2033 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family
YP_004178041.1	COGs: COG3253 conserved hypothetical protein; InterPro IPR010644; KEGG: psl:Psta_0500 chlorite dismutase; PFAM: Chlorite dismutase; SPTR: Putative uncharacterized protein; PFAM: Chlorite dismutase
YP_004178042.1	InterPro IPR000089; KEGG: fre:Franean1_7269 dehydrogenase catalytic domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Probable hydrolase; PFAM: Biotin-requiring enzyme
YP_004178043.1	InterPro IPR020476: IPR000086: IPR020084; KEGG: hut:Huta_0878 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain
YP_004178044.1	COGs: COG0125 Thymidylate kinase; InterPro IPR018094: IPR000062: IPR005829: IPR018095; KEGG: psl:Psta_2097 thymidylate kinase; PFAM: thymidylate kinase; PRIAM: dTMP kinase; SPTR: Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_004178045.1	COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR004622; KEGG: psl:Psta_2096 DNA polymerase III gamma/tau subunits-like protein; SPTR: DNA polymerase III, tau/gamma subunit; TIGRFAM: DNA polymerase III, delta prime subunit; TIGRFAM: DNA polymerase III, delta' subunit
YP_004178046.1	KEGG: paa:Paes_2121 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178047.1	COGs: COG0082 Chorismate synthase; InterPro IPR000453: IPR020541; KEGG: psl:Psta_4767 chorismate synthase; PFAM: chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: chorismate synthase; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_004178048.1	COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR001636: IPR018236; KEGG: psl:Psta_4309 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_004178049.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003018: IPR003661: IPR003594: IPR001789: IPR 005467: IPR004358; KEGG: tcx:Tcr_2068 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; response regulator receiver; SPTR: Sensory transduction histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004178050.1	InterPro IPR009056; KEGG: noc:Noc_1610 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178051.1	KEGG: dpo:Dpse_GA21277 GA21277 gene product from transcript GA21277-RA; SPTR: Putative uncharacterized protein
YP_004178052.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: isc:IscW_ISCW012637 dtdp-glucose 4-6-dehydratase, putative; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Dtdp-glucose 4-6-dehydratase, putative; PFAM: NAD dependent epimerase/dehydratase family
YP_004178053.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: mpl:Mpal_2127 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004178054.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sru:SRU_0620 putative colanic acid biosynthesis glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Putative colanic acid biosynthesis glycosyl transferase; PFAM: Glycosyl transferases group 1
YP_004178055.1	InterPro IPR011658: IPR009056: IPR011031: IPR017937; KEGG: psl:Psta_3883 PA14 domain protein; SMART: PA14 domain protein; SPTR: PA14 domain protein; PFAM: PA14 domain
YP_004178056.1	KEGG: plm:Plim_1580 large, multifunctional secreted protein; SPTR: Large, multifunctional secreted protein
YP_004178057.1	KEGG: similar to SET domain containing 1A; SPTR: Putative uncharacterized protein
YP_004178058.1	KEGG: act:ACLA_011820 myosin type II heavy chain, putative; SPTR: Myosin type II heavy chain, putative; manually curated
YP_004178059.1	KEGG: nar:Saro_3560 dehydrogenase catalytic domain-containing protein; SPTR: Catalytic domain of components of various dehydrogenase complexes
YP_004178060.1	KEGG: scl:sce2655 two-component hybrid sensor and regulator; SPTR: Two-component hybrid sensor and regulator
YP_004178061.1	COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: cyb:CYB_1783 sugar transferase family protein; PFAM: sugar transferase; SPTR: Bacterial sugar transferase family protein; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
YP_004178062.1	COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: rxy:Rxyl_3119 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2
YP_004178063.1	KEGG: gem:GM21_3502 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178064.1	InterPro IPR008912; KEGG: psl:Psta_0364 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SPTR: VWA containing CoxE family protein; PFAM: VWA domain containing CoxE-like protein
YP_004178065.1	InterPro IPR002092; KEGG: psl:Psta_0365 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178066.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: psl:Psta_0366 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5; SPTR: ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily)
YP_004178067.1	KEGG: psl:Psta_0367 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178068.1	InterPro IPR007527; KEGG: psl:Psta_0368 zinc finger SWIM domain protein; SPTR: Zinc finger SWIM domain protein
YP_004178069.1	COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006323: IPR005834; KEGG: azl:AZL_a10480 phosphonoacetaldehyde hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Phosphonoacetaldehyde hydrolase; TIGRFAM: phosphonoacetaldehyde hydrolase; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphonoacetaldehyde hydrolase
YP_004178070.1	COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR012703: IPR017688: IPR000192; KEGG: bfo:BRAFLDRAFT_77063 hypothetical protein; PFAM: aminotransferase class V; SPTR: Putative uncharacterized protein; TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; PFAM: Aminotransferase class-V; TIGRFAM: 2-aminoethylphosphonate aminotransferase; 2-aminoethylphosphonate--pyruvate transaminase
YP_004178071.1	COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterProIPR012846: IPR012001: IPR012000: IPR011766: IPR 000399; KEGG: psl:Psta_1779 acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; SPTR: Acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_004178072.1	InterPro IPR002321; KEGG: tmz:Tmz1t_1007 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome C'
YP_004178073.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: plm:Plim_0700 RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma factor sigW; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004178074.1	KEGG: xtr:448447 paired box 6; SPTR: Pax6 variant
YP_004178075.1	KEGG: rba:RB4703 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178076.1	KEGG: mva:Mvan_3126 beta-ketoacyl synthase; SPTR: Beta-ketoacyl synthase
YP_004178077.1	COGs: COG0486 GTPase; InterPro IPR005225: IPR018948: IPR002917; KEGG: tra:Trad_1190 tRNA modification GTPase TrmE; PFAM: GTP-binding protein HSR1-related; GTP-binding protein TrmE-like; SPTR: TRNA modification GTPase TrmE; TIGRFAM: small GTP-binding protein; manually curated; PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain
YP_004178078.1	KEGG: gvi:gvip179 dihydrobiliverdin:ferredoxin oxidoreductase; SPTR: Ferredoxin-dependent bilin reductase; PFAM: Ferredoxin-dependent bilin reductase
YP_004178079.1	COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670: IPR017972; KEGG: reu:Reut_C6426 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase
YP_004178080.1	KEGG: rba:RB3171 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178081.1	COGs: COG3684 Tagatose-1 6-bisphosphate aldolase; InterPro IPR002915; KEGG: deb:DehaBAV1_1156 tagatose 1,6-diphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Tagatose-bisphosphate aldolase; SPTR: Tagatose-bisphosphate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: tagatose 1,6-diphosphate aldolase
YP_004178082.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014: IPR003661: IPR003594: IPR001789: IPR 005467: IPR000700: IPR013767: IPR004358; KEGG: rba:RB13181 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: Sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004178083.1	InterPro IPR013517; KEGG: plm:Plim_3628 FG-GAP repeat protein; PFAM: FG-GAP repeat protein; SPTR: Lipoprotein, putative
YP_004178085.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031: IPR018201; KEGG: adg:Adeg_0960 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_004178086.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR006638: IPR002792: IPR013848: IPR005839: IPR 005840: IPR007197: IPR020612; KEGG: psl:Psta_3170 MiaB-like tRNA modifying enzyme YliG; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: MiaB-like tRNA modifying enzyme YliG; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family
YP_004178087.1	COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570: IPR000462; KEGG: psl:Psta_3169 CDP-diacylglycerol/glycerol-3-phosphate3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR:CDP-diacylglycerol/glycerol-3-phosphate3-phosp hatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_004178088.1	COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: chy:CHY_1158 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_004178089.1	COGs: COG3857 ATP-dependent nuclease subunit B; InterPro IPR014017; KEGG: plm:Plim_2361 ATP-dependent nuclease subunit B-like protein; SPTR: ATP-dependent deoxyribonuclease subunit B
YP_004178090.1	COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016: IPR014017: IPR000212; KEGG: plm:Plim_1377 exodeoxyribonuclease V; PFAM: UvrD/REP helicase; PRIAM: Exodeoxyribonuclease V; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase
YP_004178091.1	COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: rxy:Rxyl_1295 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Cna protein B-type domain; PFAM: Subtilase family
YP_004178092.1	COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804: IPR019818; KEGG: tbi:Tbis_2812 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004178093.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_1302 protein of unknown function DUF1559; SPTR: Probable fimbrial protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178094.1	KEGG: psl:Psta_3881 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178095.1	KEGG: sus:Acid_6147 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362)
YP_004178096.1	InterPro IPR019734: IPR013026; KEGG: sus:Acid_3324 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004178097.1	InterPro IPR013424: IPR011449; KEGG: gur:Gura_2610 filamentous haemagglutinin outer membrane protein; PFAM: protein of unknown function DUF1555; SPTR: ATPase with chaperone activity, ATP-binding subunit
YP_004178098.1	InterPro IPR013424; KEGG: ote:Oter_0535 hypothetical protein; SPTR: Hemolysin-type calcium-binding region; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004178099.1	KEGG: mch:Mchl_4671 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178100.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593: IPR001943: IPR004176: IPR003959: IPR 013093: IPR019489: IPR001270: IPR018368; KEGG: plm:Plim_0603 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATPase AAA-2 domain protein; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif
YP_004178101.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR006626: IPR000719: IPR 017442: IPR008271; KEGG: chl:Chy400_0060 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Parallel beta-helix repeat; SPTR: Serine/threonine kinase Pkn10; PFAM: Protein kinase domain; TIGRFAM: parallel beta-helix repeat (two copies)
YP_004178102.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR020904; KEGG: rrs:RoseRS_4078 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004178103.1	KEGG: plm:Plim_2797 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178104.1	KEGG: rba:RB6127 signal peptide; SPTR: Putative uncharacterized protein
YP_004178105.1	KEGG: rba:RB6127 signal peptide; SPTR: Putative uncharacterized protein
YP_004178106.1	COGs: COG4589 CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; InterPro IPR000374; KEGG: psl:Psta_0097 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family
YP_004178107.1	COGs: COG0020 Undecaprenyl pyrophosphate synthase; InterPro IPR001441: IPR018520; KEGG: psl:Psta_0098 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_004178108.1	COGs: COG0104 Adenylosuccinate synthase; InterPro IPR001114: IPR018220; KEGG: plm:Plim_2072 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; manually curated; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_004178109.1	InterPro IPR000014: IPR001789: IPR013767: IPR013656; KEGG: mgm:Mmc1_3367 multi-sensor hybrid histidine kinase; PFAM: PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; SMART: PAS domain containing protein; response regulator receiver; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004178110.1	COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: nde:NIDE3566 putative peptidase; PFAM: peptidase M28; SPTR: Aminopeptidase; PFAM: Peptidase family M28
YP_004178111.1	KEGG: xtr:496424 heterogeneous nuclear ribonucleoprotein D-like; SPTR: Heterogeneous nuclear ribonucleoprotein D-like
YP_004178112.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650: IPR001261; KEGG: psl:Psta_1795 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Acetylornithine deacetylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase (ArgE); acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
YP_004178113.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347: IPR020904; KEGG: bbt:BBta_3977 putative 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Putative 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short chain dehydrogenase
YP_004178114.1	COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: gym:GYMC10_1924 peptidase M29 aminopeptidase II; PFAM: peptidase M29 aminopeptidase II; SPTR: Peptidase M29 aminopeptidase II; PFAM: Thermophilic metalloprotease (M29)
YP_004178115.1	KEGG: ske:Sked_36150 putative collagen-binding protein; SPTR: Putative collagen-binding protein
YP_004178116.1	InterPro IPR000209: IPR018247; KEGG: mar:MAE_50880 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Putative uncharacterized protein; PFAM: Subtilase family
YP_004178118.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: pca:Pcar_1263 ADP-heptose--LPS heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: Lipopolysaccharide heptosyltransferase II; manually curated; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II
YP_004178119.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tjr:TherJR_2845 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004178120.1	InterPro IPR002509; KEGG: dat:HRM2_19910 hypothetical protein; PFAM: polysaccharide deacetylase; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide deacetylase
YP_004178121.1	COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: sus:Acid_4738 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004178122.1	KEGG: hor:Hore_18870 glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004178123.1	COGs: COG1216 glycosyltransferase; InterPro IPR001173: IPR000276; KEGG: sus:Acid_7437 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2
YP_004178124.1	KEGG: psl:Psta_0111 organic solvent tolerance protein OstA-like protein; SPTR: Organic solvent tolerance protein OstA-like protein
YP_004178125.1	KEGG: eba:ebA607 diacylglycerol kinase; SPTR: Probable diacylglycerol kinase; PFAM: Prokaryotic diacylglycerol kinase
YP_004178126.1	COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR014105: IPR006076; KEGG: rca:Rcas_2535 zeta-phytoene desaturase; PFAM: FAD dependent oxidoreductase; SPTR: Zeta-phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase
YP_004178127.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: rrs:RoseRS_0386 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2
YP_004178128.1	InterPro IPR008009; KEGG: rci:RRC213 hypothetical protein; PFAM: Ig family protein; SPTR: Putative uncharacterized protein; PFAM: Putative Ig domain
YP_004178129.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR019734: IPR000719: IPR 013026: IPR017442: IPR001440: IPR017441: IPR008271; KEGG: plm:Plim_4000 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain; Tetratricopeptide repeat
YP_004178130.1	InterPro IPR001434: IPR008454; KEGG: rca:Rcas_2197 hypothetical protein; PFAM: protein of unknown function DUF11; Cna B domain protein; SPTR: Conserved repeat domain; TIGRFAM: conserved repeat domain protein; TIGRFAM: conserved repeat domain
YP_004178131.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR000719: IPR017442: IPR 017441: IPR008271; KEGG: psl:Psta_3332 serine/threonine protein kinase with WD40 repeats; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004178132.1	COGs: COG2138 conserved hypothetical protein; InterPro IPR002762; KEGG: plm:Plim_2903 cobalamin (vitamin B12) biosynthesis CbiX protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; SPTR: Cobalamin (Vitamin B12) biosynthesis CbiX protein; PFAM: CbiX
YP_004178133.1	InterPro IPR002123; KEGG: bse:Bsel_2210 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase
YP_004178134.1	COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR017932: IPR006426: IPR000583: IPR001962; KEGG: dvl:Dvul_0358 asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthetase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_004178135.1	KEGG: smt:Smal_3076 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF962)
YP_004178136.1	KEGG: sna:Snas_3664 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178137.1	COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099: IPR001509: IPR013549; KEGG: cwo:Cwoe_2865 domain of unknown function DUF1731; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; manually curated; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777
YP_004178138.1	KEGG: aav:Aave_1628 prophage tail length tape measure; SPTR: Prophage tail length tape measure
YP_004178139.1	InterPro IPR001129: IPR001446; KEGG: gvi:glr3057 glutathione S-transferase; PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); SPTR: Glr3057 protein; PFAM: MAPEG family
YP_004178140.1	InterPro IPR007087; KEGG: rba:RB12890 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178141.1	KEGG: bbt:BBta_7857 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory protein, arsR family
YP_004178142.1	InterPro IPR001588; KEGG: aba:Acid345_3138 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178143.1	COGs: COG2441 butyrate kinase; InterPro IPR009927; KEGG: pfu:PF1187 hypothetical protein; PFAM: protein of unknown function DUF1464; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1464)
YP_004178144.1	KEGG: tit:Thit_0694 CRISPR-associated protein, TIGR02710 family; SPTR: CRISPR-associated protein, TIGR02710 family
YP_004178145.1	KEGG: tet:TTHERM_00218470 hypothetical protein; SPTR: Exodeoxyribonuclease V, gamma subunit
YP_004178146.1	KEGG: nfi:NFIA_056950 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178147.1	KEGG: rpc:RPC_1740 RNA polymerase sigma factor; SPTR: Sigma-24 (FecI-like); TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004178148.1	KEGG: bvi:Bcep1808_3098 uracil-xanthine permease; SPTR: Putative uncharacterized protein
YP_004178149.1	KEGG: spu:758811 similar to isthmin
YP_004178150.1	InterPro IPR015259; KEGG: psl:Psta_2659 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Methylene-tetrahydromethanopterin dehydrogenase; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: Methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal
YP_004178151.1	COGs: COG1795 conserved hypothetical protein; InterPro IPR014826; KEGG: plm:Plim_1285 formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); SPTR: Formaldehyde-activating enzyme; TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme
YP_004178152.1	COGs: COG0486 GTPase; InterPro IPR018948: IPR002917: IPR004520; KEGG: plm:Plim_1709 small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; SPTR: tRNA modification GTPase mnmE; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain
YP_004178153.1	COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR000620; KEGG: afw:Anae109_2782 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_004178154.1	COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: sit:TM1040_1780 hypothetical protein; PFAM: protein of unknown function DUF140; SPTR: Membrane protein; PFAM: Domain of unknown function DUF140
YP_004178155.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_004178156.1	COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR000740; KEGG: cac:CA_C0471 GrpE protein HSP-70 cofactor; PFAM: GrpE protein; SPTR: GrpE protein HSP-70 cofactor; PFAM: GrpE
YP_004178157.1	COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR011611: IPR002173; KEGG: sth:STH1246 tagatose-6-phosphate kinase; PFAM: PfkB domain protein; SPTR: Tagatose-6-phosphate kinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family
YP_004178158.1	COGs: COG0107 Imidazoleglycerol-phosphate synthase; InterPro IPR004651: IPR006062; KEGG: plm:Plim_2829 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_004178159.1	COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321: IPR001482; KEGG: psl:Psta_1744 twitching motility protein; PFAM: type II secretion system protein E; SPTR: Twitching motility protein; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_004178160.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482; KEGG: plm:Plim_0082 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein
YP_004178161.1	KEGG: plm:Plim_0083 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Colicin V production protein
YP_004178163.1	KEGG: plm:Plim_2350 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178164.1	KEGG: plm:Plim_2686 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178165.1	InterPro IPR001648; KEGG: psl:Psta_1727 ribosomal protein S18; PFAM: ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_004178166.1	COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR012768: IPR004193: IPR006047; KEGG: cyb:CYB_2529 malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; SPTR: Malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: malto-oligosyltrehalose trehalohydrolase
YP_004178167.1	COGs: COG3280 Maltooligosyl trehalose synthase; InterPro IPR006589: IPR012767: IPR004300: IPR006047; KEGG: cag:Cagg_2094 maltooligosyl trehalose synthase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 57; SMART: alpha amylase catalytic sub domain; SPTR: Malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: Alpha amylase, catalytic domain; Glycosyl hydrolase family 57; Domain of unknown function (DUF3536); TIGRFAM: malto-oligosyltrehalose synthase
YP_004178168.1	KEGG: adg:Adeg_1075 FMN-dependent alpha-hydroxy acid dehydrogenase; SPTR: Putative PAS/PAC sensor protein
YP_004178169.1	COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: pca:Pcar_0019 hypothetical protein; PFAM: protein of unknown function UPF0027; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027
YP_004178170.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839: IPR004838; KEGG: psl:Psta_4235 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and II
YP_004178171.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR000719: IPR017442: IPR 002355: IPR017441: IPR008271; KEGG: psl:Psta_4528 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004178172.1	InterPro IPR017871; KEGG: plm:Plim_0078 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178173.1	KEGG: plm:Plim_0077 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178174.1	COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: plm:Plim_0076 type IV pilus assembly protein PilM; SPTR: Probable fimbrial assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM
YP_004178175.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014: IPR001610: IPR003661: IPR003594: IPR 001789: IPR005467: IPR013767: IPR013656: IPR004358; KEGG: cyb:CYB_1640 sensory box histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; SPTR: Sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004178176.1	COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR004602: IPR003439: IPR017871; KEGG: rba:RB10876 excinuclease ABC subunit A; PFAM: ABC transporter related; SPTR: Excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_004178177.1	COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: psl:Psta_3561 protein of unknown function DUF374; PFAM: protein of unknown function DUF374; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF374)
YP_004178178.1	COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: hsa:51076 cutC copper transporter homolog (E. coli); PFAM: CutC family protein; SPTR: CGI-32 protein; PFAM: CutC family
YP_004178179.1	COGs: COG0443 Molecular chaperone; InterPro IPR002035: IPR013126: IPR001023: IPR018181; KEGG: cac:CA_C0473 heat shock protein DnaK; PFAM: Heat shock protein 70; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: DnaK protein (Heat shock protein), C-terminal region has VWA type A domain; PFAM: Hsp70 protein; von Willebrand factor type A domain
YP_004178180.1	COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: mei:Msip34_1120 small multidrug resistance protein; PFAM: small multidrug resistance protein; SPTR: Small multidrug resistance protein; PFAM: Small Multidrug Resistance protein
YP_004178181.1	COGs: COG0295 Cytidine deaminase; InterPro IPR006262: IPR002125: IPR016192; KEGG: ote:Oter_2657 cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric
YP_004178182.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873: IPR020845; KEGG: sus:Acid_0587 2-acyl-glycerophospho-ethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme
YP_004178183.1	COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: psl:Psta_3892 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain
YP_004178184.1	KEGG: rba:RB8370 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C
YP_004178185.1	COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR006196: IPR004368; KEGG: tme:Tmel_0976 translation initiation factor IF-1; PFAM: S1 IF1 family protein; SPTR: Probable translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_004178186.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; KEGG: geo:Geob_3152 3-beta hydroxysteroid dehydrogenase/isomerase; SPTR: 3-beta hydroxysteroid dehydrogenase/isomerase; PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase family
YP_004178187.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873: IPR020845; KEGG: geo:Geob_3151 peptide synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme
YP_004178188.1	COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: sus:Acid_4848 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase
YP_004178189.1	COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: gur:Gura_2358 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004178190.1	COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412: IPR013525: IPR013526; KEGG: bts:Btus_0876 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter
YP_004178191.1	COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: plm:Plim_3155 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase; PRIAM: 4-hydroxy-2-oxovalerate aldolase; SPTR: 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_004178192.1	COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: rba:RB1703 maf protein; PFAM: Maf family protein; SPTR: Maf protein; TIGRFAM: maf protein; PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_004178193.1	COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR005117: IPR006067: IPR006066; KEGG: psl:Psta_1330 sulfite reductase (NADPH); PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PRIAM: Sulfite reductase (NADPH); SPTR: Sulfite reductase; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: ferredoxin-sulfite reductase
YP_004178194.1	COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR000559: IPR020628; KEGG: amu:Amuc_1860 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase
YP_004178195.1	COGs: COG0486 GTPase; InterPro IPR002917; KEGG: alv:Alvin_1744 GTP-binding protein HSR1-related protein; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein HSR1-related protein; PFAM: GTPase of unknown function
YP_004178196.1	COGs: COG3597 Uncharacterized protein/domain associated with GTPase; KEGG: alv:Alvin_1745 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: GTPase of unknown function; Domain of unknown function (DUF697)
YP_004178197.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001367: IPR001626; KEGG: psl:Psta_4677 ABC-3 protein; PFAM: ABC-3 protein; iron dependent repressor; SMART: iron dependent repressor; SPTR: ABC-3 protein; PFAM: ABC 3 transport family; Iron dependent repressor, metal binding and dimerisation domain
YP_004178198.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: psl:Psta_4676 ABC-3 protein; PFAM: ABC-3 protein; SPTR: ABC-3 protein; PFAM: ABC 3 transport family
YP_004178199.1	COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: psl:Psta_4675 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004178200.1	COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006311: IPR006127: IPR006128: IPR006129; KEGG: sth:STH1506 ABC transporter permease protein; PFAM: periplasmic solute binding protein; SPTR: ABC transporter permease protein; PFAM: Periplasmic solute binding protein family
YP_004178201.1	COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR016303: IPR002658; KEGG: rba:RB6147 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase
YP_004178202.1	COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: rso:RS01755 putative tryptophan-2,3-dioxygenase oxidoreductase protein; PFAM: tryptophan 23-dioxygenase; SPTR: Tryptophan 2 3 dioxygenase; PFAM: Tryptophan 2,3-dioxygenase
YP_004178203.1	COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR014001: IPR001650: IPR014021: IPR004576: IPR 003711: IPR011545: IPR005118; KEGG: plm:Plim_3728 transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)
YP_004178204.1	KEGG: tro:trd_0686 transcriptional regulator; SPTR: Putative regulatory protein
YP_004178206.1	KEGG: fra:Francci3_2916 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2029)
YP_004178207.1	COGs: COG0196 FAD synthase; InterPro IPR015864: IPR015865; KEGG: psl:Psta_3846 riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; SPTR: Riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase
YP_004178208.1	InterPro IPR010719; KEGG: rmr:Rmar_1203 putative rRNA methylase; PFAM: rRNA methylase; SPTR: Putative rRNA methylase; PFAM: Putative rRNA methylase
YP_004178209.1	COGs: COG4767 Glycopeptide antibiotics resistance protein; InterPro IPR006976; KEGG: cac:CA_C0829 hypothetical protein; PFAM: VanZ family protein; SPTR: VanZ family protein; PFAM: VanZ like family
YP_004178210.1	COGs: COG4935 Regulatory P domain of the subtilisin-like proprotein convertase and other protease; InterPro IPR000209: IPR002884; KEGG: mar:MAE_12430 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; SPTR: Putative uncharacterized protein; PFAM: Proprotein convertase P-domain; Subtilase family
YP_004178211.1	COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: psl:Psta_2684 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Syringomycin biosynthesis enzyme 2-like protein; PFAM: Phytanoyl-CoA dioxygenase (PhyH)
YP_004178212.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683; KEGG: plm:Plim_0006 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_004178213.1	COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437: IPR001387; KEGG: rba:RB2296 chromosome partitioning protein ParB; PFAM: ParB domain protein nuclease; helix-turn-helix domain protein; SMART: ParB domain protein nuclease; SPTR: Probable chromosome partitioning protein parB; TIGRFAM: parB-like partition protein; PFAM: Helix-turn-helix; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_004178214.1	COGs: COG0205 6-phosphofructokinase; InterPro IPR011403: IPR000023; KEGG: psl:Psta_4392 6-phosphofructokinase; PFAM: phosphofructokinase; SPTR: 6-phosphofructokinase; PFAM: Phosphofructokinase
YP_004178215.1	KEGG: fre:Franean1_2999 MmpL domain-containing protein; SPTR: MMPL domain protein
YP_004178216.1	COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: rba:RB3195 carboxyl-terminal processing protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Carboxyl-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_004178217.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1030 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1
YP_004178218.1	KEGG: eba:ebB145 acyl carrier protein; SPTR: Predicted acyl carrier protein; PFAM: Phosphopantetheine attachment site
YP_004178219.1	COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715; KEGG: rba:RB754 polysaccharide export protein; PFAM: polysaccharide export protein; SPTR: Probable polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein
YP_004178220.1	InterPro IPR001509; KEGG: xac:XAC4039 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein
YP_004178221.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004839: IPR004838; KEGG: pth:PTH_1314 histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; PFAM: aminotransferase class I and II; SPTR: Aminotransferase class I and II; manually curated; PFAM: Aminotransferase class I and II
YP_004178222.1	InterPro IPR017136; KEGG: dge:Dgeo_1820 hypothetical protein; PFAM: Uncharacterised conserved protein UCP037205; SPTR: Zn-ribbon protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2256)
YP_004178223.1	COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135: IPR008136: IPR001453; KEGG: rxy:Rxyl_2558 competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: CinA-like protein; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain
YP_004178224.1	COGs: COG1403 Restriction endonuclease; InterPro IPR003615: IPR002711; KEGG: plm:Plim_1211 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease domain protein; PFAM: HNH endonuclease
YP_004178225.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: rca:Rcas_3656 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004178226.1	KEGG: msl:Msil_3355 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178227.1	KEGG: rba:RB9030 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178228.1	COGs: COG0550 Topoisomerase IA; InterProIPR006154: IPR003601: IPR003602: IPR005733: IPR 006171: IPR013497: IPR013498: IPR000380; KEGG: hau:Haur_4389 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_004178229.1	COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); InterPro IPR004568: IPR002582: IPR008278; KEGG: psl:Psta_3536 holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Acyl-carrier protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_004178231.1	COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: rsk:RSKD131_2807 beta-Ig-H3/fasciclin precursor; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Beta-Ig-H3/Fasciclin; PFAM: Fasciclin domain
YP_004178232.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR011912: IPR001509; KEGG: dvu:DVU0481 ADP-L-glycero-D-mannoheptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase
YP_004178233.1	COGs: COG1899 Deoxyhypusine synthase; InterPro IPR002773; KEGG: aca:ACP_1729 deoxyhypusine synthase-like protein; PFAM: deoxyhypusine synthase; SPTR: Deoxyhypusine synthase family protein; PFAM: Deoxyhypusine synthase; TIGRFAM: deoxyhypusine synthase
YP_004178234.1	InterPro IPR014346: IPR003675; KEGG: amr:AM1_1967 CAAX prenyl protease-related protein, putative; PFAM: Abortive infection protein; SPTR: Caax prenyl protease-related protein, putative; TIGRFAM: CAAX prenyl protease-related protein; PFAM: CAAX amino terminal protease family; TIGRFAM: CAAX prenyl protease-related protein
YP_004178235.1	COGs: COG3391 conserved hypothetical protein; InterPro IPR011964: IPR007312; KEGG: sus:Acid_4558 YVTN beta-propeller repeat-containing protein; PFAM: phosphoesterase; SPTR: 40-residue YVTN family beta-propeller repeat protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: Phosphoesterase family; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat
YP_004178236.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: nhl:Nhal_0824 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004178237.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: nhl:Nhal_0822 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family
YP_004178238.1	KEGG: ami:Amir_6377 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily
YP_004178239.1	InterPro IPR013517; KEGG: rba:RB8789 hypothetical protein; PFAM: FG-GAP repeat protein; SPTR: Putative uncharacterized protein; PFAM: FG-GAP repeat
YP_004178240.1	COGs: COG3808 Inorganic pyrophosphatase; InterPro IPR004131; KEGG: pvi:Cvib_0758 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: V-type H(+)-translocating pyrophosphatase; TIGRFAM: V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase
YP_004178241.1	COGs: COG1530 Ribonuclease G and E; InterPro IPR003029: IPR004659: IPR019307; KEGG: psl:Psta_2436 ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family
YP_004178242.1	KEGG: lch:Lcho_2901 hypothetical protein; SPTR: Helicase
YP_004178243.1	COGs: COG5011 conserved hypothetical protein; InterPro IPR018768; KEGG: afw:Anae109_0737 radical SAM domain-containing protein; PFAM: Protein of unknown function DUF2344; SPTR: Radical SAM domain protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2344)
YP_004178244.1	COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterPro IPR006318: IPR008731: IPR008279: IPR000121; KEGG: plm:Plim_0359 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; SPTR: Phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_004178245.1	COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR000032: IPR005698; KEGG: gau:GAU_1482 phosphocarrier protein HPr; PFAM: phosphoryl transfer system HPr; SPTR: Phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_004178246.1	COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: plm:Plim_0361 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_004178247.1	KEGG: xop:PXO_05780 ISXo8 transposase; SPTR: ISXo8 transposase
YP_004178248.1	InterPro IPR000387: IPR004861; KEGG: geo:Geob_0068 protein tyrosine/serine phosphatase; PFAM: tyrosine phosphatase; SPTR: Protein tyrosine/serine phosphatase; PFAM: Tyrosine phosphatase family
YP_004178249.1	COGs: COG1371 conserved hypothetical protein; InterPro IPR002804; KEGG: rmr:Rmar_0655 protein of unknown function DUF101; PFAM: protein of unknown function DUF101; SPTR: Putative uncharacterized protein; PFAM: Archease protein family (DUF101/UPF0211)
YP_004178250.1	KEGG: fal:FRAAL3740 epoxide hydrolase; SPTR: Whole genome shotgun sequence assembly, scaffold_116
YP_004178251.1	COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR019734: IPR001440: IPR004846; KEGG: plm:Plim_0641 hypothetical protein; PFAM: type II and III secretion system protein; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II and III secretion system protein
YP_004178252.1	KEGG: clu:CLUG_03274 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178253.1	KEGG: syr:SynRCC307_1777 hypothetical protein
YP_004178254.1	InterPro IPR001701; KEGG: tfu:Tfu_2176 endoglucanase; PFAM: glycoside hydrolase family 9; SPTR: Endoglucanase. Glycosyl Hydrolase family 9; PFAM: Glycosyl hydrolase family 9
YP_004178255.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917: IPR022272; KEGG: plm:Plim_3419 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; TIGRFAM: choline-sulfatase
YP_004178256.1	KEGG: hoh:Hoch_0150 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2760)
YP_004178257.1	KEGG: aca:ACP_0440 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178258.1	COGs: COG0158 Fructose-1 6-bisphosphatase; InterPro IPR000146; KEGG: amr:AM1_6321 fructose-1,6-bisphosphatase; PFAM: Inositol phosphatase/fructose-16-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase class 1 2; PFAM: Fructose-1-6-bisphosphatase
YP_004178259.1	COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; InterPro IPR007886: IPR007698; KEGG: sus:Acid_3375 NAD(P) transhydrogenase subunit alpha; PFAM: alanine dehydrogenase/PNT domain protein; SPTR: Alanine dehydrogenase/PNT domain protein; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit
YP_004178260.1	COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; KEGG: hoh:Hoch_1909 oxidoreductase; SPTR: Proton-translocating transhydrogenase subunit alpha 2
YP_004178261.1	COGs: COG1282 NAD/NADP transhydrogenase beta subunit; InterPro IPR012136: IPR004003; KEGG: lbf:LBF_0176 NAD(P)(+) transhydrogenase subunit beta; PFAM: NAD(P) transhydrogenase beta subunit; PRIAM: NAD(P)(+) transhydrogenase (AB-specific); SPTR: NAD(P) transhydrogenase subunit beta; PFAM: NAD(P) transhydrogenase beta subunit
YP_004178262.1	COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839: IPR001917; KEGG: gau:GAU_2840 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase
YP_004178263.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031; KEGG: tro:trd_A0447 beta-ketoacyl-acyl-carrier-protein synthase II; PFAM: Beta-ketoacyl synthase; SPTR: Putative uncharacterized protein; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_004178264.1	COGs: COG0502 Biotin synthase; InterPro IPR006638: IPR002684: IPR007197: IPR010722; KEGG: sli:Slin_2405 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase
YP_004178265.1	KEGG: mth:MTH1810 hypothetical protein
YP_004178266.1	KEGG: plm:Plim_3503 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178267.1	InterPro IPR005358; KEGG: plm:Plim_3260 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153)
YP_004178268.1	COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: ade:Adeh_1778 homocysteine S-methyltransferase; PFAM: homocysteine S-methyltransferase; SPTR: Homocysteine S-methyltransferase; PFAM: Homocysteine S-methyltransferase
YP_004178269.1	InterPro IPR008915; KEGG: sno:Snov_3348 peptidase M50; PFAM: peptidase M50; SPTR: Putative uncharacterized protein; manually curated; PFAM: Peptidase family M50
YP_004178270.1	COGs: COG2154 Pterin-4a-carbinolamine dehydratase; InterPro IPR001533; KEGG: plm:Plim_4232 transcriptional coactivator/pterin dehydratase; PFAM: transcriptional coactivator/pterin dehydratase; SPTR: Probable pterin-4-alpha-carbinolamine dehydratase; PFAM: Pterin 4 alpha carbinolamine dehydratase
YP_004178271.1	COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070: IPR004388: IPR010923: IPR005145; KEGG: aba:Acid345_4092 translation factor SUA5; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein; SPTR: Sua5/YciO/YrdC/YwlC; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_004178272.1	COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR005101; KEGG: rca:Rcas_4249 deoxyribodipyrimidine photolyase-like protein; PFAM: DNA photolyase FAD-binding; SPTR: Probable deoxyribodipyrimidine photolyase; PFAM: FAD binding domain of DNA photolyase
YP_004178273.1	COGs: COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase; InterPro IPR007357: IPR005101; KEGG: rrs:RoseRS_0009 deoxyribodipyrimidine photolyase-related protein; PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; SPTR: Deoxyribodipyrimidine photolyase-related protein; PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein
YP_004178274.1	InterPro IPR000182; KEGG: rer:RER_23190 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004178275.1	COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: scl:sce7444 NAD-dependent deacetylase; PFAM: Silent information regulator protein Sir2; SPTR: Transcriptional regulatory protein, Sir2 family; manually curated; PFAM: Sir2 family
YP_004178276.1	KEGG: scb:SCAB_17871 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178277.1	COGs: COG0165 Argininosuccinate lyase; InterPro IPR009049: IPR000362: IPR003031: IPR020557; KEGG: psl:Psta_0383 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; manually curated; PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_004178278.1	COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002986: IPR000183; KEGG: plm:Plim_1775 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_004178279.1	SPTR: IP09468p
YP_004178280.1	InterPro IPR004155; KEGG: plm:Plim_1773 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: LigA
YP_004178281.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR003593: IPR002078: IPR002197; KEGG: psl:Psta_0385 sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Acetoacetate metabolism regulatory protein atoC; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004178282.1	KEGG: bfr:BF0490 D-alanyl-alanine synthetase A
YP_004178283.1	COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR005279: IPR000109: IPR018456; KEGG: xal:XALc_Yp01 hypothetical amino acid/peptide transporter protein; PFAM: TGF-beta receptor type I/II extracellular region; SPTR: Di-/tripeptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial
YP_004178284.1	KEGG: psl:Psta_0548 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178285.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: plm:Plim_1311 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004178286.1	InterPro IPR001387: IPR013096; KEGG: plm:Plim_2075 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: DNA-binding protein; PFAM: Cupin domain; Helix-turn-helix
YP_004178287.1	COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR004627: IPR013154: IPR013149: IPR002328; KEGG: plm:Plim_2076 L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_004178288.1	COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR011282: IPR004839: IPR001917; KEGG: plm:Plim_2077 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; PRIAM: Glycine C-acetyltransferase; SPTR: 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase
YP_004178289.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789: IPR003661: IPR003594: IPR005467: IPR 004358; KEGG: dsa:Desal_1726 Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Hpt sensor hybrid histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004178290.1	COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR003018: IPR000014: IPR001610: IPR003594: IPR 016132: IPR005467: IPR000700: IPR013515: IPR013767: IPR013655:I PR013656: IPR011495: IPR001294; KEGG: rpe:RPE_1343 putative PAS/PAC sensor protein; PFAM: GAF domain protein; Phytochrome central region domain protein; PAS fold domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: GAF domain protein; PAS domain containing protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Phytochrome region; PAS fold; TIGRFAM: PAS domain S-box
YP_004178291.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: csa:Csal_1351 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004178292.1	InterPro IPR000412: IPR013525: IPR013526; KEGG: maq:Maqu_1098 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter
YP_004178293.1	InterPro IPR011444; KEGG: rba:RB4803 signal peptide; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553)
YP_004178294.1	InterPro IPR017909: IPR006311: IPR010869; KEGG: psl:Psta_0183 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004178295.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: dge:Dgeo_0058 ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: Methyltransferase type 11; SPTR: Putative methyltransferase; PFAM: Methyltransferase domain
YP_004178296.1	COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734: IPR013026: IPR001440; KEGG: azl:AZL_f01560 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat
YP_004178297.1	COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterProIPR013840: IPR003583: IPR001357: IPR001679: IPR 013839: IPR004150: IPR000445: IPR018239; KEGG: psl:Psta_2044 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein; SMART: NAD-dependent DNA ligase; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; SPTR: DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; Helix-hairpin-helix motif; TIGRFAM: DNA ligase, NAD-dependent
YP_004178298.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nde:NIDE2987 putative glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1
YP_004178299.1	COGs: COG0438 Glycosyltransferase; InterPro IPR006589: IPR001296: IPR006047; KEGG: tro:trd_1930 possible glycanase or glycogenase with amylase domain; PFAM: glycosyl transferase group 1; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Possible glycanase or glycogenase with amylase domain; PFAM: Glycosyl transferases group 1; Alpha amylase, catalytic domain; Domain of unknown function (DUF3416)
YP_004178300.1	COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: psl:Psta_0154 protein of unknown function DUF178; PFAM: protein of unknown function DUF178; SPTR: Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178)
YP_004178301.1	COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050: IPR005244: IPR007197; KEGG: plm:Plim_2811 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily; menaquinone biosynthesis protein, SCO4550 family
YP_004178302.1	COGs: COG0412 Dienelactone hydrolase; KEGG: dar:Daro_3231 dienelactone hydrolase; PRIAM: Carboxymethylenebutenolidase; SPTR: Dienelactone hydrolase; PFAM: Dienelactone hydrolase family
YP_004178303.1	KEGG: nfa:nfa19400 ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase
YP_004178304.1	InterPro IPR006342; KEGG: rru:Rru_A3719 methyltransferase FkbM; SPTR: Genome sequencing data, contig C315; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family
YP_004178305.1	COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: acp:A2cp1_2280 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase family
YP_004178306.1	KEGG: rba:RB4919 signal peptide; SPTR: Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_004178307.1	COGs: COG0021 Transketolase; InterProIPR005478: IPR005474: IPR005475: IPR005476: IPR 020826; KEGG: mea:Mex_1p1861 transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; SPTR: Transketolase; TIGRFAM: transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_004178308.1	COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: rba:RB8208 chlorohydrolase; PFAM: amidohydrolase; SPTR: Probable chlorohydrolase; PFAM: Amidohydrolase family
YP_004178309.1	COGs: COG1678 Putative transcriptional regulator protein; InterPro IPR003774; KEGG: psl:Psta_3870 protein of unknown function DUF179; PFAM: protein of unknown function DUF179; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1678
YP_004178310.1	COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466: IPR001586; KEGG: srm:SRM_02930 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase
YP_004178311.1	KEGG: tra:Trad_0396 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178312.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: ppp:PHYPADRAFT_141539 hypothetical protein; PFAM: aminotransferase class IV; SPTR: Putative branched chain amino acid aminotransferase; PFAM: Aminotransferase class IV
YP_004178313.1	InterPro IPR013424: IPR011449; KEGG: mno:Mnod_0484 glycerophosphoryl diester phosphodiesterase; PFAM: protein of unknown function DUF1555; SPTR: Glycerophosphoryl diester phosphodiesterase; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004178314.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: rba:RB183 putative outer membrane protein; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein
YP_004178316.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170; KEGG: swo:Swol_1763 hypothetical protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_004178317.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253: IPR018247; KEGG: plm:Plim_0878 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Forkhead-associated protein; PFAM: FHA domain
YP_004178318.1	COGs: COG0539 Ribosomal protein S1; InterPro IPR003029: IPR000110; KEGG: plm:Plim_1620 ribosomal protein S1; PFAM: RNA binding S1 domain protein; SPTR: Ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_004178319.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: psl:Psta_3458 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004178320.1	COGs: COG0049 Ribosomal protein S7; InterPro IPR005717: IPR000235: IPR020606; KEGG: psl:Psta_2548 ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_004178321.1	COGs: COG0048 Ribosomal protein S12; InterPro IPR005679: IPR006032; KEGG: hau:Haur_3275 30S ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_004178322.1	COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; InterPro IPR011763: IPR001095: IPR020582; KEGG: psl:Psta_4222 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
YP_004178323.1	COGs: COG0515 Serine/threonine protein kinase; InterPro IPR020635: IPR002290: IPR000719: IPR017442; KEGG: psl:Psta_4221 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable protein kinase yloP; PFAM: Protein kinase domain
YP_004178324.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593: IPR002543: IPR018541; KEGG: psl:Psta_2807 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: Cell divisionFtsK/SpoIIIE; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_004178325.1	InterPro IPR019734: IPR001440; KEGG: pca:Pcar_1872 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat protein
YP_004178326.1	InterPro IPR013517: IPR011519; KEGG: sus:Acid_1964 ASPIC/UnbV domain-containing protein; PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; SPTR: ASPIC/UnbV domain protein; PFAM: ASPIC and UnbV
YP_004178327.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789: IPR003593: IPR002078: IPR002197: IPR 020441; KEGG: plm:Plim_2084 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Sigma-54 factor interaction domain-containing protein; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004178328.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR005467: IPR 004358; KEGG: psl:Psta_0490 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: Histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004178329.1	KEGG: mfa:Mfla_1237 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178330.1	KEGG: psl:Psta_1651 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dienelactone hydrolase family
YP_004178331.1	COGs: COG3008 Paraquat-inducible protein B; InterPro IPR007498: IPR003399; KEGG: abo:ABO_2405 PqiB family protein; PFAM: Paraquat-inducible protein A; Mammalian cell entry related domain protein; SPTR: Mce related protein; PFAM: mce related protein; Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family
YP_004178332.1	KEGG: psl:Psta_4060 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178333.1	COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR011831: IPR005835: IPR005836; KEGG: plm:Plim_1974 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase
YP_004178334.1	COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR012902: IPR001120; KEGG: psl:Psta_2986 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178335.1	KEGG: psl:Psta_0693 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated
YP_004178336.1	COGs: COG1770 Protease II; InterPro IPR004106: IPR002470; KEGG: sus:Acid_3709 oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; PRIAM: Oligopeptidase B; SPTR: Oligopeptidase B; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family
YP_004178337.1	KEGG: cfa:485022 KH-type splicing regulatory protein; SPTR: Whole genome shotgun sequence assembly, scaffold_139
YP_004178338.1	InterPro IPR012902; KEGG: plm:Plim_4084 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178339.1	KEGG: abo:ABO_1105 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178340.1	InterPro IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178341.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_4084 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178342.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178343.1	KEGG: syp:SYNPCC7002_A0336 ABC-type phosphate/phosphonate transport system periplasmic component; SPTR: Activating transcription factor 6-like protein
YP_004178344.1	KEGG: rha:RHA1_ro01893 ABC amino acid transporter, periplasmic binding protein; SPTR: ABC amino acid transporter, periplasmic binding protein
YP_004178345.1	KEGG: aba:Acid345_0515 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BNR/Asp-box repeat
YP_004178346.1	KEGG: tgo:TGME49_015600 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178347.1	COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495: IPR011629; KEGG: rme:Rmet_1098 cobalamin synthesis protein P47K; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SPTR: Cobalamin synthesis protein/P47K; PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain
YP_004178348.1	InterPro IPR019613; KEGG: abu:Abu_2284 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region
YP_004178349.1	KEGG: bta:508527 biorientation of chromosomes in cell division 1-like; SPTR: BOD1L protein
YP_004178350.1	COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR005765: IPR000836; KEGG: ttr:Tter_1755 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase
YP_004178351.1	InterPro IPR000182; KEGG: psl:Psta_0547 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family
YP_004178352.1	InterPro IPR011444; KEGG: sus:Acid_0974 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553)
YP_004178353.1	InterPro IPR017909: IPR010869; KEGG: psl:Psta_4533 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004178354.1	KEGG: sli:Slin_2951 glycosyl transferase family protein; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2
YP_004178355.1	InterPro IPR010496; KEGG: rba:RB9196 secreted glycosyl hydrolase; PFAM: protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; PFAM: Domain of Unknown Function (DUF1080)
YP_004178356.1	COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: plm:Plim_1905 ferrochelatase; PFAM: ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_004178357.1	COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: mca:MCA0477 allophanate hydrolase, subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; SPTR: Allophanate hydrolase, subunit 2; PFAM: Allophanate hydrolase subunit 2
YP_004178358.1	COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR005764: IPR000836; KEGG: plm:Plim_3653 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_004178359.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR005829: IPR001958; KEGG: gvi:gll1490 tetracycline resistance protein; PFAM: major facilitator superfamily MFS_1; SPTR: Tetracycline resistance protein; PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein
YP_004178360.1	COGs: COG0151 Phosphoribosylamine-glycine ligase; InterProIPR011761: IPR000115: IPR020562: IPR020561: IPR 020560: IPR020559; KEGG: plm:Plim_1777 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_004178361.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cag:Cagg_2495 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004178362.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_0904 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004178363.1	KEGG: rca:Rcas_2085 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178364.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: jan:Jann_1467 oxidoreductase-like; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase-like protein; manually curated; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004178365.1	COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR005263: IPR002220; KEGG: plm:Plim_1370 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_004178366.1	COGs: COG0591 Na+/proline symporter; InterPro IPR001734: IPR006311; KEGG: phe:Phep_2815 SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SPTR: Sodium-dependent multivitamin transporter; PFAM: Sodium:solute symporter family
YP_004178367.1	COGs: COG3613 Nucleoside 2-deoxyribosyltransferase; InterPro IPR007710; KEGG: mbn:Mboo_2452 nucleoside 2-deoxyribosyltransferase; PFAM: nucleoside 2-deoxyribosyltransferase; SPTR: Nucleoside 2-deoxyribosyltransferase; PFAM: Nucleoside 2-deoxyribosyltransferase
YP_004178368.1	KEGG: cal:CaO19.4334 Proline_Alanine_Serine repeat protein; SPTR: Fe-S oxidoreductase
YP_004178369.1	KEGG: ame:725726 hypothetical protein LOC725726; SPTR: Histidine-rich jaw structural protein
YP_004178370.1	KEGG: scl:sce8575 PE-PGRS family protein; SPTR: Whole genome shotgun sequence assembly, scaffold_14
YP_004178371.1	KEGG: scl:sce9323 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178372.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568: IPR014030: IPR014031: IPR018201; KEGG: adg:Adeg_0960 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_004178373.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568: IPR014030: IPR014031: IPR018201; KEGG: plm:Plim_2564 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_004178374.1	COGs: COG0236 Acyl carrier protein; InterPro IPR009081: IPR003231: IPR006163: IPR006162; KEGG: rba:RB318 acyl carrier protein precursor; PFAM: phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_004178375.1	COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR004534: IPR018319; KEGG: hmo:HM1_2507 L-seryl-tRNA selenium transferase; PFAM: Pyridoxal phosphate-dependent transferase; PRIAM: L-seryl-tRNA(Sec) selenium transferase; SPTR: L-seryl-tRNA selenium transferase; TIGRFAM: L-seryl-tRNA selenium transferase; PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase
YP_004178376.1	KEGG: swi:Swit_1745 aldehyde dehydrogenase (acceptor); SPTR: Putative uncharacterized protein
YP_004178377.1	KEGG: psl:Psta_2273 protein of unknown function DUF1588; SPTR: Putative uncharacterized protein
YP_004178378.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR006311: IPR000683; KEGG: dfe:Dfer_1237 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004178379.1	COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR006311: IPR012307; KEGG: zpr:ZPR_4222 probable glyoxylate-induced protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Probable glyoxylate-induced protein; PFAM: Xylose isomerase-like TIM barrel
YP_004178380.1	InterPro IPR017504; KEGG: rba:RB4470 signal peptide; SPTR: Putative uncharacterized protein; TIGRFAM: Planctomycetes uncharacterized domain TIGR03067
YP_004178382.1	KEGG: dpo:Dpse_GA11831 GA11831 gene product from transcript GA11831-RA; SPTR: Putative uncharacterized protein
YP_004178383.1	COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR005743: IPR002205: IPR006691; KEGG: rba:RB8841 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit
YP_004178384.1	KEGG: ddr:Deide_06010 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2721)
YP_004178385.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dde:Dde_0462 sulfatase; PFAM: sulfatase; SPTR: Sulfatase, putative; PFAM: Sulfatase
YP_004178386.1	COGs: COG0531 Amino acid transporter; InterPro IPR006016; KEGG: pcu:pc0262 hypothetical protein; PFAM: UspA domain-containing protein; SPTR: Amino acid permease-associated region; PFAM: Universal stress protein family
YP_004178387.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR006311: IPR000683; KEGG: plm:Plim_0111 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004178388.1	InterProIPR019734: IPR000719: IPR013026: IPR017442: IPR 001440; KEGG: dal:Dalk_5269 TPR repeat-containing protein; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Protein kinase domain; Tetratricopeptide repeat
YP_004178389.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: rca:Rcas_0525 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine-protein kinase; PFAM: Protein kinase domain
YP_004178390.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterProIPR020817: IPR005110: IPR001453: IPR005111: IPR 008284; KEGG: met:M446_3276 putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: Molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_004178391.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: tpd:Teth39_1750 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family
YP_004178392.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR013108; KEGG: swi:Swit_0080 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Putative uncharacterized protein; PFAM: Amidohydrolase family
YP_004178393.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: dau:Daud_2020 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family
YP_004178394.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: rmr:Rmar_1420 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family
YP_004178395.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: ami:Amir_0524 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family
YP_004178396.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: tte:TTE0530 imidazolonepropionase and related amidohydrolase; PFAM: amidohydrolase; SPTR: Imidazolonepropionase and related amidohydrolases; PFAM: Amidohydrolase family
YP_004178397.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR013108: IPR006680; KEGG: sth:STH1913 putative amidohydrolase; PFAM: Amidohydrolase 3; amidohydrolase; SPTR: Putative amidohydrolase; PFAM: Amidohydrolase family
YP_004178398.1	KEGG: plm:Plim_2865 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178399.1	KEGG: sus:Acid_2874 transmembrane prediction; SPTR: Putative uncharacterized protein
YP_004178400.1	COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR005790: IPR010372; KEGG: plm:Plim_3591 DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; SPTR: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_004178401.1	COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: pmx:PERMA_0988 adenylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_004178402.1	InterPro IPR009056: IPR013428: IPR013427: IPR003088; KEGG: rba:RB3322 cytochrome c; PFAM: cytochrome c class I; SPTR: Putative uncharacterized protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004178403.1	COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398: IPR002052; KEGG: sfu:Sfum_3033 putative methyltransferase; PFAM: Conserved hypothetical protein CHP00095; SPTR: Putative methyltransferase; TIGRFAM: methyltransferase; manually curated; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_004178404.1	COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646; KEGG: psl:Psta_2057 tRNA adenylyltransferase; PFAM: Polynucleotide adenylyltransferase region; SPTR: Metal dependent phosphohydrolase; PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase
YP_004178405.1	KEGG: amd:AMED_5754 putative O-methyltransferase; SPTR: Beta-lactamase regulatory protein BlaB
YP_004178406.1	COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273: IPR005122; KEGG: aca:ACP_0612 uracil-DNA glycosylase, family 4; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Uracil-DNA glycosylase, family 4; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_004178407.1	InterPro IPR002018: IPR004155; KEGG: plm:Plim_3568 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; Carboxylesterase type B; SPTR: Putative uncharacterized protein; PFAM: PBS lyase HEAT-like repeat
YP_004178408.1	COGs: COG4112 phosphoesterase (MutT family); KEGG: psl:Psta_3526 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain
YP_004178409.1	KEGG: plm:Plim_1299 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178410.1	KEGG: ppe:PEPE_0573 polysaccharide polymerase; SPTR: Putative uncharacterized protein
YP_004178411.1	KEGG: naz:Aazo_0786 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178412.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: plm:Plim_3949 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase
YP_004178413.1	KEGG: plm:Plim_2804 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF962)
YP_004178414.1	COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804: IPR019818; KEGG: psl:Psta_0983 isocitrate dehydrogenase (NAD(+)); PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NAD-dependent, mitochondrial type; isocitrate dehydrogenase, NADP-dependent, prokaryotic type
YP_004178415.1	COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; InterPro IPR003758; KEGG: rba:RB7300 tetraacyldisaccharide 4-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase
YP_004178416.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011910: IPR002201; KEGG: plm:Plim_0899 lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: ADP-heptose--LPS heptosyltransferase II, putative; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II
YP_004178417.1	COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097: IPR006096: IPR006095: IPR014362; KEGG: ath:AT5G18170 GDH1 (GLUTAMATE DEHYDROGENASE 1); ATP binding / glutamate dehydrogenase [NAD(P)+]/ oxidoreductase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SPTR: Putative uncharacterized protein; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_004178418.1	COGs: COG0319 metal-dependent hydrolase; InterPro IPR002036: IPR020549; KEGG: plm:Plim_2234 protein of unknown function UPF0054; PFAM: protein of unknown function UPF0054; SPTR: Putative metalloprotease Plim_2234; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family
YP_004178419.1	COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR006675: IPR006674: IPR003607; KEGG: plm:Plim_2233 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Putative uncharacterized protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG
YP_004178420.1	COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: psl:Psta_2532 PhoH family protein; PFAM: PhoH family protein; SPTR: PhoH family protein; PFAM: PhoH-like protein
YP_004178421.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: pla:Plav_1850 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Response regulator receiver domain
YP_004178422.1	KEGG: bcv:Bcav_4123 HNH nuclease
YP_004178423.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160: IPR001261; KEGG: plm:Plim_1868 retinal dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Retinal dehydrogenase; PFAM: Aldehyde dehydrogenase family
YP_004178424.1	COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: psl:Psta_1920 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; PFAM: Penicillinase repressor
YP_004178425.1	KEGG: pat:Patl_1507 major facilitator transporter; SPTR: Major facilitator superfamily MFS_1
YP_004178426.1	KEGG: pfu:PF0725 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178427.1	KEGG: ferrichrome ABC transporter (permease) homolog; SPTR: ABC transporter, membrane spanning protein
YP_004178428.1	COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130: IPR011506: IPR001343; KEGG: psl:Psta_1955 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; Planctomycete extracellular domain protein; Hemolysin-type calcium-binding region; SPTR: Peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_004178429.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR010197: IPR013341: IPR013342; KEGG: chl:Chy400_0934 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: Mandelate racemase/muconate lactonizing protein; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase
YP_004178430.1	InterPro IPR017909: IPR006311: IPR010869; KEGG: rba:RB12732 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004178431.1	InterPro IPR011444; KEGG: plm:Plim_0522 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004178432.1	KEGG: sbi:SORBI_05g025880 hypothetical protein; SPTR: Putative uncharacterized protein Sb05g025880
YP_004178433.1	KEGG: mse:Msed_0762 SMC domain-containing protein; SPTR: AcrB
YP_004178434.1	KEGG: plm:Plim_0688 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA binding domain, excisionase family
YP_004178435.1	KEGG: psl:Psta_4199 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178436.1	KEGG: cqu:CpipJ_CPIJ010111 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178437.1	InterPro IPR007029: IPR011017; KEGG: rba:RB1174 signal peptide; PFAM: YHS domain-containing protein; SMART: TRASH domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: YHS domain
YP_004178438.1	COGs: COG2193 Bacterioferritin (cytochrome b1); InterPro IPR009040: IPR008331; KEGG: psl:Psta_4002 ferritin Dps family protein; PFAM: Ferritin Dps family protein; SPTR: Putative uncharacterized protein; PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin
YP_004178439.1	KEGG: pcs:Pc16g05880 Pc16g05880; SPTR: Pc16g05880 protein
YP_004178440.1	KEGG: pcs:Pc16g05880 Pc16g05880; SPTR: Pc16g05880 protein
YP_004178441.1	KEGG: psl:Psta_1622 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178442.1	KEGG: fre:Franean1_6664 FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase
YP_004178443.1	COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: bcj:BCAL2009 hypothetical protein; PFAM: protein of unknown function DUF1800; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1800)
YP_004178444.1	COGs: COG4102 conserved hypothetical protein; InterPro IPR017909: IPR006311: IPR010869; KEGG: plm:Plim_4236 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004178445.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_2547 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178446.1	KEGG: scl:sce1709 putative secreted proline rich protein; SPTR: Putative secreted proline rich protein
YP_004178447.1	COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR017963: IPR001126; KEGG: psl:Psta_3727 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; PRIAM: DNA-directed DNA polymerase; SPTR: DNA-directed DNA polymerase; PFAM: impB/mucB/samB family
YP_004178448.1	KEGG: psl:Psta_3728 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178449.1	InterPro IPR009430; KEGG: mxa:MXAN_2772 GvpL/GvpF family gas vesicle protein; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: Gas vesicle protein, GvpL/GvpF family; PFAM: Gas vesicle synthesis protein GvpL/GvpF
YP_004178450.1	COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: nmu:Nmul_A2462 rhomboid-like protein; PFAM: Rhomboid family protein; SPTR: Rhomboid family protein; PFAM: Rhomboid family
YP_004178451.1	InterPro IPR000352; KEGG: plm:Plim_0816 class I peptide chain release factor; PFAM: Class I peptide chain release factor; SPTR: Putative uncharacterized protein; PFAM: RF-1 domain
YP_004178452.1	InterPro IPR003644: IPR000169: IPR006626; KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; Parallel beta-helix repeat; SPTR: Na-Ca exchanger/integrin-beta4; PFAM: Calx-beta domain
YP_004178453.1	KEGG: rba:RB2412 signal peptide; SPTR: Putative uncharacterized protein
YP_004178454.1	KEGG: bhy:BHWA1_00453 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178455.1	KEGG: ddc:Dd586_0514 putative capsular polysaccharide biosynthesis protein; SPTR: Putative capsular polysaccharide biosynthesis protein
YP_004178456.1	COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: plm:Plim_4237 protein of unknown function DUF1800; PFAM: protein of unknown function DUF1800; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1800)
YP_004178457.1	COGs: COG4102 conserved hypothetical protein; InterPro IPR010869; KEGG: plm:Plim_4236 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004178458.1	COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402: IPR005834; KEGG: gem:GM21_1179 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_004178459.1	InterPro IPR002052: IPR002296; KEGG: cyn:Cyan7425_5355 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative RNA methylase family UPF0020
YP_004178460.1	COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805: IPR004013: IPR011708: IPR004365: IPR 003141; KEGG: plm:Plim_1265 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: phosphoesterase PHP domain protein; SPTR: DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_004178461.1	KEGG: gsu:GSU1537 general secretion pathway protein-related protein; SPTR: General secretion pathway protein-related protein
YP_004178462.1	KEGG: tgu:100220437 collagen type III alpha 1; SPTR: Whole genome shotgun sequence assembly, scaffold_15, strain Mel28
YP_004178463.1	KEGG: ttr:Tter_1099 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178464.1	COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: psl:Psta_4420 serine O-acetyltransferase; PRIAM: Serine O-acetyltransferase; SPTR: Serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase
YP_004178465.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR011418; KEGG: psl:Psta_1535 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel
YP_004178466.1	KEGG: gox:GOX0933 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178467.1	COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: rxy:Rxyl_2988 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase
YP_004178468.1	KEGG: pgu:PGUG_01177 hypothetical protein
YP_004178469.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: psl:Psta_4229 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family
YP_004178470.1	InterPro IPR001455; KEGG: mar:MAE_49330 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178471.1	COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960: IPR018124; KEGG: plm:Plim_1862 lipid A biosynthesis acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: Probable lipid A biosynthesis lauroyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_004178472.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: rca:Rcas_3889 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004178473.1	KEGG: plm:Plim_0620 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178474.1	KEGG: psl:Psta_4149 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178475.1	InterPro IPR000608; KEGG: psl:Psta_4148 ubiquitin-conjugating protein E2; SPTR: Ubiquitin-conjugating protein E2; PFAM: Ubiquitin-conjugating enzyme
YP_004178476.1	COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594; KEGG: psl:Psta_4146 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: UBA/THIF-type NAD/FAD binding protein; PFAM: ThiF family
YP_004178477.1	InterPro IPR000555; KEGG: psl:Psta_4145 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family protein; SPTR: Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family
YP_004178478.1	COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR000731; KEGG: nca:Noca_2163 MmpL domain-containing protein; SPTR: MMPL domain protein; PFAM: MMPL family
YP_004178479.1	KEGG: cag:Cagg_3648 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178480.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: bmr:BMI_II322 spermidine/putrescine ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter
YP_004178481.1	COGs: COG1178 ABC-type Fe3+ transport system permease component; KEGG: ttj:TTHA0716 molybdenum ABC transporter, permease protein; SPTR: Binding-protein-dependent transport systems inner membrane component
YP_004178482.1	COGs: COG2133 Glucose/sorbosone dehydrogenase; InterProIPR021133: IPR009056: IPR013427: IPR004155: IPR 014795; KEGG: plm:Plim_1957 heme-binding protein; PFAM: protein of unknown function DUF1778; PBS lyase HEAT domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: heme-binding protein; PFAM: Cytochrome c; HEAT repeat; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004178483.1	KEGG: psl:Psta_0447 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178484.1	COGs: COG2513 PEP phosphonomutase; InterPro IPR012695: IPR000918: IPR018523; KEGG: psl:Psta_3159 methylisocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; SPTR: Methylisocitrate lyase; TIGRFAM: methylisocitrate lyase; PFAM: Isocitrate lyase family; TIGRFAM: methylisocitrate lyase
YP_004178485.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: psl:Psta_2824 PfkB domain protein; PFAM: PfkB domain protein; SPTR: PfkB domain protein; PFAM: pfkB family carbohydrate kinase
YP_004178486.1	COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR000214: IPR012319: IPR000191: IPR015886: IPR 015887; KEGG: slp:Slip_1694 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: Putative uncharacterized protein; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_004178487.1	InterPro IPR012902: IPR001120: IPR000983; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178488.1	COGs: COG0321 Lipoate-protein ligase B; InterPro IPR004143; KEGG: plm:Plim_3383 lipoate-protein ligase B-like protein; PFAM: biotin/lipoate A/B protein ligase; SPTR: Lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B
YP_004178489.1	COGs: COG0320 Lipoate synthase; InterPro IPR003698: IPR007197: IPR006638; KEGG: plm:Plim_3382 lipoic acid synthetase; PFAM: Radical SAM domain protein; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Lipoyl synthase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase
YP_004178490.1	KEGG: sus:Acid_3388 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004178491.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439: IPR017940: IPR006162; KEGG: cpe:CPE1525 ABC transporter; SPTR: Phospholipid-lipopolysaccharide ABC transporter
YP_004178492.1	KEGG: plm:Plim_0058 putative membrane bound transporter; SPTR: Putative uncharacterized protein
YP_004178493.1	COGs: COG2217 Cation transport ATPase; InterProIPR006416: IPR008250: IPR005834: IPR018303: IPR 001757: IPR000695; KEGG: rba:RB4891 cadmium-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; PRIAM: Zinc-exporting ATPase; SPTR: Cadmium-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_004178494.1	COGs: COG0388 amidohydrolase; InterPro IPR003010: IPR001110; KEGG: plm:Plim_2311 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Predicted amidohydrolase; PFAM: Carbon-nitrogen hydrolase
YP_004178495.1	KEGG: syn:slr1959 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178496.1	COGs: COG4145 Na+/panthothenate symporter; InterPro IPR001734: IPR019900; KEGG: psl:Psta_2785 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family
YP_004178497.1	KEGG: psl:Psta_2784 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178498.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rba:RB12167 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein
YP_004178499.1	KEGG: hsa:203286 ankyrin repeat and sterile alpha motif domain containing 6; SPTR: cDNA FLJ45802 fis, clone NT2RI3001967, highly similar to Ankyrin repeat and SAM domain-containing protein 6
YP_004178500.1	KEGG: ara:Arad_0807 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178501.1	COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR014284: IPR012845: IPR007627: IPR007624: IPR 007630: IPR000943; KEGG: psl:Psta_3555 RNA polymerase, sigma 28 subunit, FliA/WhiG; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family
YP_004178502.1	COGs: COG1419 Flagellar GTP-binding protein; KEGG: psl:Psta_3558 GTP-binding signal recognition particle SRP54 G-domain protein; SPTR: GTP-binding signal recognition particle SRP54 G-domain protein
YP_004178503.1	COGs: COG1298 Flagellar biosynthesis pathway component FlhA; InterPro IPR001712; KEGG: plm:Plim_1138 flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; SPTR: Flagella-associated protein; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA
YP_004178504.1	COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367: IPR007167; KEGG: psl:Psta_3183 iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; SPTR: Iron (Metal) dependent repressor, DtxR family; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_004178505.1	COGs: COG2343 conserved hypothetical protein; InterPro IPR007361: IPR010916; KEGG: msl:Msil_3182 protein of unknown function DUF427; PFAM: protein of unknown function DUF427; SPTR: Uncharacterized protein conserved in bacteria; PFAM: Domain of unknown function (DUF427)
YP_004178506.1	InterPro IPR019500; KEGG: ote:Oter_0618 hypothetical protein; PFAM: Peptidase S46; SPTR: Putative uncharacterized protein; PFAM: Peptidase S46
YP_004178507.1	COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR000620; KEGG: scl:sce4294 DMT family permease; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Permease of the drug/metabolite transporter (DMT) superfamily; PFAM: EamA-like transporter family
YP_004178508.1	COGs: COG0498 Threonine synthase; InterPro IPR004450: IPR001926; KEGG: tye:THEYE_A1678 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_004178509.1	InterPro IPR003749; KEGG: tfu:Tfu_2369 hypothetical protein; PFAM: thiamineS protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: ThiS family
YP_004178510.1	COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594: IPR007901; KEGG: sti:Sthe_0801 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SPTR: Molybdopterin biosynthesis protein MoeB; PFAM: MoeZ/MoeB domain; ThiF family
YP_004178511.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: sti:Sthe_0800 cysteine desulfurase family protein; PFAM: aminotransferase class V; SPTR: Similar to selenocysteine lyase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein
YP_004178512.1	KEGG: srm:SRM_02168 conserved hypothetical protein, secreted; SPTR: Putative uncharacterized protein
YP_004178513.1	COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: mxa:MXAN_0644 M1 family peptidase; PFAM: Peptidase M1 membrane alanine aminopeptidase; SPTR: Peptidase, M1 (Aminopeptidase N) family; PFAM: Peptidase family M1
YP_004178514.1	KEGG: rca:Rcas_3850 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase
YP_004178515.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149; KEGG: rba:RB11985 quinone oxidoreductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Quinone oxidoreductase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004178516.1	KEGG: tgo:TGME49_078190 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178517.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907: IPR018215; KEGG: ote:Oter_2740 endopeptidase Clp; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_004178518.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907: IPR018215; KEGG: plm:Plim_3338 endopeptidase Clp; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_004178519.1	COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012838: IPR007197: IPR001989; KEGG: nha:Nham_0890 pyruvate formate-lyase activating; PFAM: Radical SAM domain protein; PRIAM: [Formate-C-acetyltransferase]-activating enzyme; SPTR: Pyruvate formate-lyase activating; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme
YP_004178520.1	COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: mxa:MXAN_2064 carbon-nitrogen family hydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Possible nitrilase; PFAM: Carbon-nitrogen hydrolase
YP_004178521.1	KEGG: dpo:Dpse_GA28568 GA28568 gene product from transcript GA28568-RA; SPTR: GA28568
YP_004178522.1	COGs: COG1882 Pyruvate-formate lyase; InterPro IPR001150: IPR005949: IPR004184: IPR019777; KEGG: cya:CYA_0477 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: Formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1
YP_004178523.1	KEGG: acp:A2cp1_0253 Fe-S oxidoreductase; SPTR: Fe-S oxidoreductase
YP_004178524.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: plm:Plim_3007 RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004178525.1	InterPro IPR000182; KEGG: psl:Psta_4773 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Nourseothricin acetyltransferase-like protein; PFAM: Acetyltransferase (GNAT) family
YP_004178526.1	KEGG: eli:ELI_05005 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Flp/Fap pilin component
YP_004178527.1	KEGG: ure:UREG_00791 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178528.1	KEGG: cfa:609399 hypothetical protein LOC609399; SPTR: Putative uncharacterized protein
YP_004178529.1	COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: psl:Psta_3353 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: tRNA/rRNA methyltransferase (SpoU); PFAM: SpoU rRNA Methylase family
YP_004178530.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR003661: IPR003594: IPR 004358; KEGG: plm:Plim_1346 PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; MASE1
YP_004178531.1	COGs: COG2721 Altronate dehydratase; InterPro IPR013974: IPR007392; KEGG: kra:Krad_0582 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; PRIAM: Galactarate dehydratase; SPTR: Altronate dehydratase; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus
YP_004178532.1	KEGG: mmr:Mmar10_1970 spore coat polysaccharide biosynthesis protein glycosyltransferase-like protein
YP_004178533.1	KEGG: rmr:Rmar_0200 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178534.1	COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: sti:Sthe_3396 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004178535.1	KEGG: bta:100336730 myocyte enhancer factor 2D-like; SPTR: Putative uncharacterized protein
YP_004178536.1	KEGG: mjl:Mjls_5025 polysaccharide deacetylase; SPTR: Polysaccharide deacetylase
YP_004178537.1	KEGG: der:Dere_GG14334 GG14334 gene product from transcript GG14334-RA; SPTR: GG14334
YP_004178538.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178539.1	KEGG: plm:Plim_2744 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178540.1	KEGG: rca:Rcas_4172 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178541.1	COGs: COG0430 RNA 3'-terminal phosphate cyclase; InterPro IPR000228; KEGG: tgr:Tgr7_1692 RNA 3'-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase; PRIAM: RNA-3'-phosphate cyclase; SPTR: RNA 3'-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase; TIGRFAM: RNA 3'-phosphate cyclase
YP_004178542.1	InterPro IPR005349; KEGG: ter:Tery_4061 hypothetical protein; PFAM: protein of unknown function UPF0136; SPTR: Putative uncharacterized protein; PFAM: Transmembrane proteins 14C
YP_004178543.1	KEGG: gvi:glr4340 hypothetical protein; SPTR: Glr4340 protein; PFAM: SOUL heme-binding protein
YP_004178544.1	COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013: IPR002054: IPR003583: IPR003141; KEGG: tte:TTE2516 family X DNA polymerase IV; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; DNA polymerase X; Helix-hairpin-helix DNA-binding class 1; SPTR: PHP domain protein; PFAM: PHP domain
YP_004178545.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: psl:Psta_2844 LmbE family protein; PFAM: LmbE family protein; SPTR: Putative uncharacterized protein; PFAM: GlcNAc-PI de-N-acetylase
YP_004178546.1	KEGG: plm:Plim_3397 4-amino-4-deoxy-L-arabinose transferase-like glycosyltransferase of PMT family; SPTR: Putative uncharacterized protein
YP_004178547.1	COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR006405: IPR015977: IPR007229; KEGG: pzu:PHZ_c0648 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; SPTR: Nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase
YP_004178548.1	InterPro IPR017936: IPR013740: IPR017937; KEGG: mch:Mchl_0201 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin
YP_004178549.1	COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR000432; KEGG: afw:Anae109_2424 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; SPTR: DNA mismatch repair protein MutS domain protein; PFAM: MutS domain V
YP_004178550.1	COGs: COG3670 Lignostilbene-alpha beta-dioxygenase; InterPro IPR006311: IPR004294; KEGG: cyt:cce_2215 retinal pigment epithelial membrane protein; PFAM: Carotenoid oxygenase; PRIAM: 9-cis-epoxycarotenoid dioxygenase; SPTR: Putative uncharacterized protein; PFAM: Retinal pigment epithelial membrane protein
YP_004178551.1	COGs: COG0173 Aspartyl-tRNA synthetase; InterProIPR006195: IPR004524: IPR004365: IPR004364: IPR 004115: IPR002312; KEGG: plm:Plim_3302 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_004178552.1	KEGG: rrs:RoseRS_2250 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2357); Protein of unknown function (DUF524)
YP_004178553.1	COGs: COG1401 GTPase subunit of restriction endonuclease; KEGG: bcb:BCB4264_A0433 ATPase associated with various cellular activities AAA_5; SPTR: GTPase subunit of restriction endonuclease
YP_004178554.1	InterPro IPR006148; KEGG: plm:Plim_2730 glucosamine/galactosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine-6-phosphate isomerase, putative; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
YP_004178555.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003439: IPR017940: IPR005074: IPR001140: IPR 017871: IPR003593; KEGG: npu:Npun_F3763 ABC transporter related; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; TIGRFAM: NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein; NHPM bacteriocin system ABC transporter, ATP-binding protein
YP_004178556.1	KEGG: ana:alr7298 hypothetical protein; SPTR: Alr7298 protein; TIGRFAM: NHPM bacteriocin system secretion protein
YP_004178557.1	COGs: COG1915 conserved hypothetical protein; InterPro IPR005239: IPR007545; KEGG: psl:Psta_3748 LOR/SDH bifunctional protein conserved domain protein; PFAM: LOR/SDH bifunctional protein conserved domain protein; SPTR: LOR/SDH bifunctional protein conserved domain protein; PFAM: LOR/SDH bifunctional enzyme conserved region; TIGRFAM: conserved hypothetical protein TIGR00300
YP_004178558.1	COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: rrs:RoseRS_0174 cobalamin (vitamin B12) biosynthesis CbiM protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: Cobalamin (Vitamin B12) biosynthesis CbiM protein; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM
YP_004178559.1	COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439: IPR003339: IPR017871: IPR003593; KEGG: tbi:Tbis_0515 cobalt ABC transporter ATPase subunit; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase; SPTR: Cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter; Cobalt transport protein
YP_004178560.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198: IPR020904: IPR002347; KEGG: psl:Psta_3581 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Glucose 1-dehydrogenase-like protein; PFAM: short chain dehydrogenase
YP_004178561.1	KEGG: tel:tll2350 virulence factor MviN-like protein
YP_004178562.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: htu:Htur_3376 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase
YP_004178563.1	COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474: IPR010827: IPR000184; KEGG: plm:Plim_2365 outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein
YP_004178564.1	InterPro IPR019734: IPR013026: IPR001440: IPR020053; KEGG: rca:Rcas_1124 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; manually curated
YP_004178565.1	InterPro IPR014284; KEGG: sis:LS215_1063 protein of unknown function DUF1156; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004178566.1	InterPro IPR014338: IPR001611; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; PFAM: Leucine Rich Repeat; TIGRFAM: repeat-companion domain TIGR02996
YP_004178567.1	InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996
YP_004178568.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR020904: IPR002347; KEGG: mno:Mnod_1178 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004178569.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: fal:FRAAL4418 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Putative serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004178570.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: hoh:Hoch_1100 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004178571.1	KEGG: plm:Plim_3700 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178572.1	COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942: IPR006225: IPR006145: IPR006224; KEGG: psl:Psta_2843 pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_004178573.1	InterPro IPR019734: IPR013026: IPR001440: IPR001917; KEGG: plm:Plim_3586 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_004178574.1	COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR006283: IPR000728: IPR010918; KEGG: psl:Psta_3917 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; PRIAM: Thiamine-phosphate kinase; SPTR: Thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase
YP_004178575.1	COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: mta:Moth_0404 glycerate kinase; PFAM: glycerate kinase; PRIAM: Glycerate kinase; SPTR: Glycerate kinase; TIGRFAM: glycerate kinase; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase
YP_004178576.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467: IPR001789: IPR003661: IPR003594: IPR 004358; KEGG: sus:Acid_4297 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Response regulator receiver sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain
YP_004178577.1	COGs: COG0171 NAD synthase; InterPro IPR003010: IPR003694: IPR014445; KEGG: psl:Psta_3194 NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase
YP_004178578.1	COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: rrs:RoseRS_1915 WD40 domain-containing protein; PFAM: WD40-like beta Propeller containing protein; SPTR: WD40 domain protein beta Propeller; PFAM: WD40-like Beta Propeller Repeat
YP_004178579.1	COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; InterPro IPR005251: IPR011559: IPR000649; KEGG: mta:Moth_0703 translation initiation factor 2B subunit I; PFAM: initiation factor 2B related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: Methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase
YP_004178580.1	KEGG: pan:PODANSg7841 hypothetical protein; SPTR: Predicted protein
YP_004178581.1	COGs: COG0686 Alanine dehydrogenase; InterPro IPR008141: IPR007886: IPR007698: IPR008143; KEGG: plm:Plim_3804 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; SPTR: Alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase
YP_004178582.1	KEGG: cci:CC1G_09301 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178583.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090; KEGG: gur:Gura_2352 acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004178584.1	COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888: IPR001509; KEGG: msl:Msil_2711 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase
YP_004178585.1	COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907: IPR005835; KEGG: dol:Dole_1011 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form
YP_004178586.1	COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: rxy:Rxyl_3120 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase
YP_004178587.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: psl:Psta_3399 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain
YP_004178588.1	KEGG: rcu:RCOM_0218920 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178589.1	COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: ade:Adeh_2974 L-lactate transporter; PFAM: L-lactate permease; SPTR: L-lactate transporter; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; TIGRFAM: L-lactate transport
YP_004178590.1	COGs: COG4301 conserved hypothetical protein; InterPro IPR017804: IPR019257; KEGG: npu:Npun_F2219 hypothetical protein; PFAM: Protein of unknown function DUF2260; SPTR: Putative uncharacterized protein; TIGRFAM: methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase
YP_004178591.1	COGs: COG3572 Gamma-glutamylcysteine synthetase; InterPro IPR006336; KEGG: nml:Namu_1082 glutamate/cysteine ligase family protein; PFAM: glutamate--cysteine ligase GCS2; PRIAM: Glutamate--cysteine ligase; SPTR: Glutamate/cysteine ligase family protein; PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, plant type
YP_004178592.1	KEGG: bpm:BURPS1710b_1193 phosphoglycerate mutase family protein; SPTR: Possible integral membrane protein
YP_004178593.1	KEGG: sen:SACE_3494 enantiomer-selective amidase; SPTR: Enantiomer-selective amidase
YP_004178594.1	COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR011761: IPR006284: IPR004215: IPR004218; KEGG: scl:sce7568 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; PRIAM: Glutathione synthase; SPTR: Glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic
YP_004178595.1	KEGG: mca:MCA2974 PKD domain-containing protein; SPTR: PKD domain protein
YP_004178596.1	KEGG: pop:POPTR_658978 hypothetical protein; SPTR: Predicted protein
YP_004178597.1	COGs: COG1510 transcriptional regulator protein; KEGG: bpt:Bpet0455 putative transcriptional regulator; SPTR: Transcriptional regulator; PFAM: Sugar-specific transcriptional regulator TrmB
YP_004178598.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: mxa:MXAN_2962 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: Response regulator receiver domain
YP_004178599.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467: IPR000014: IPR000700: IPR013656: IPR 013767: IPR003661: IPR003594: IPR004358; KEGG: pin:Ping_1250 sensor histidine kinase PAS domain-containing protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004178600.1	KEGG: mxa:MXAN_2771 GvpL/GvpF family gas vesicle protein; SPTR: Gas vesicle protein, GvpL/GvpF family; PFAM: Gas vesicle synthesis protein GvpL/GvpF
YP_004178601.1	KEGG: azl:AZL_b00450 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178602.1	COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: sfu:Sfum_0568 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Similar to peptidyl-prolyl cis-trans isomerase (Survival protein SurA); PFAM: PPIC-type PPIASE domain
YP_004178603.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: plm:Plim_3596 LmbE family protein; PFAM: LmbE family protein; SPTR: LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase
YP_004178604.1	KEGG: pla:Plav_2132 phosphomethylpyrimidine kinase; SPTR: Phosphomethylpyrimidine kinase
YP_004178605.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: rrs:RoseRS_3938 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: FHA domain containing protein; PFAM: FHA domain
YP_004178606.1	COGs: COG0780 Enzyme related to GTP cyclohydrolase I; InterPro IPR016856: IPR020602; KEGG: plm:Plim_2723 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: PreQ(1) synthase; SPTR: NADPH-dependent 7-cyano-7-deazaguanine reductase; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase
YP_004178607.1	COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: psl:Psta_4032 protein of unknown function DUF62; PFAM: protein of unknown function DUF62; SPTR: Putative uncharacterized protein; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase
YP_004178608.1	KEGG: plm:Plim_3431 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178609.1	COGs: COG0438 Glycosyltransferase; KEGG: ami:Amir_3661 glycosyl transferase group 1; SPTR: Putative uncharacterized protein
YP_004178610.1	InterPro IPR010496; KEGG: rba:RB569 hypothetical protein; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080)
YP_004178611.1	COGs: COG0531 Amino acid transporter; InterPro IPR004841: IPR002293; KEGG: rpc:RPC_1838 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region; PFAM: Amino acid permease; TC 2.A.3
YP_004178612.1	COGs: COG1199 Rad3-related DNA helicase; InterPro IPR014013: IPR014001: IPR006554: IPR006555; KEGG: plm:Plim_0188 helicase C2; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicase; SPTR: Helicase c2; PFAM: Type III restriction enzyme, res subunit
YP_004178613.1	InterPro IPR002509; KEGG: plm:Plim_0677 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase
YP_004178614.1	KEGG: sus:Acid_1360 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178615.1	COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR017909: IPR001395: IPR020471; KEGG: hoh:Hoch_0560 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family
YP_004178616.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyc:PCC7424_0330 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004178617.1	COGs: COG3536 conserved hypothetical protein; KEGG: ank:AnaeK_3736 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF971)
YP_004178618.1	KEGG: cbr:CBG23538 Hypothetical protein CBG23538; SPTR: Putative uncharacterized protein
YP_004178619.1	COGs: COG1413 FOG: HEAT repeat; InterPro IPR009056: IPR013427: IPR004155; KEGG: psl:Psta_1217 heme-binding protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: heme-binding protein; PFAM: Cytochrome c; PBS lyase HEAT-like repeat; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004178620.1	COGs: COG2706 3-carboxymuconate cyclase; KEGG: psl:Psta_1125 6-phosphogluconolactonase; PRIAM: 6-phosphogluconolactonase; SPTR: 6-phosphogluconolactonase; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme
YP_004178621.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psl:Psta_4258 sulfatase; PFAM: sulfatase; SPTR: Arylsulfatase; PFAM: Sulfatase
YP_004178622.1	COGs: COG0354 aminomethyltransferase related to GcvT; InterPro IPR017703: IPR006222; KEGG: psl:Psta_1957 folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); SPTR: Putative uncharacterized protein; TIGRFAM: folate-binding protein YgfZ; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ
YP_004178623.1	COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268: IPR000845; KEGG: gtn:GTNG_2244 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: Purine nucleoside phosphorylase; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; PFAM: Phosphorylase superfamily; TIGRFAM: inosine guanosine and xanthosine phosphorylase family
YP_004178624.1	COGs: COG1972 Nucleoside permease; InterPro IPR002668: IPR011642: IPR011657; KEGG: aca:ACP_1720 nucleoside:Na+ symporter, concentrative nucleoside transporter (CNT) family; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; SPTR: Nucleoside:Na+ symporter, concentrative nucleoside transporter (CNT) family; PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter
YP_004178625.1	KEGG: sbi:SORBI_06g026125 hypothetical protein; SPTR: Hypothetical membrane protein
YP_004178626.1	COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR004722: IPR006680: IPR002195; KEGG: nde:NIDE2540 dihydroorotase; PFAM: amidohydrolase; SPTR: Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type
YP_004178627.1	COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterProIPR002082: IPR006132: IPR006131: IPR006130: IPR 003006; KEGG: plm:Plim_2268 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; SPTR: Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_004178628.1	COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: pth:PTH_1813 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Bifunctional protein pyrR; PFAM: Phosphoribosyl transferase domain
YP_004178629.1	COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: plm:Plim_3576 beta-Ig-H3/fasciclin; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Beta-Ig-H3/fasciclin; PFAM: Fasciclin domain
YP_004178630.1	COGs: COG4398 conserved hypothetical protein; InterPro IPR013702: IPR019494: IPR016741; KEGG: psl:Psta_0358 domain of unknown function DUF1745; PFAM: domain of unknown function DUF1745; FIST C domain; SPTR: Putative uncharacterized protein; PFAM: FIST C domain; FIST N domain
YP_004178631.1	KEGG: scl:sce5405 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178632.1	KEGG: scl:sce5406 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: KAP family P-loop domain
YP_004178633.1	COGs: COG0433 ATPase; InterPro IPR003593; KEGG: scl:sce5407 hypothetical protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87
YP_004178634.1	COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component; InterProIPR003439: IPR014769: IPR005666: IPR013611: IPR 017871: IPR003593; KEGG: cyb:CYB_0238 sulfate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter; TOBE domain; TIGRFAM: sulfate ABC transporter, ATP-binding protein
YP_004178635.1	COGs: COG4208 ABC-type sulfate transport system permease component; InterPro IPR000515: IPR005667; KEGG: cya:CYA_0468 sulfate ABC transporter, permease protein CysW; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sulfate ABC transporter, permease protein CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein
YP_004178636.1	COGs: COG0555 ABC-type sulfate transport system permease component; InterPro IPR000515: IPR005667; KEGG: hau:Haur_0258 sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sulfate ABC transporter, inner membrane subunit; TIGRFAM: sulfate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT
YP_004178637.1	COGs: COG1613 ABC-type sulfate transport system periplasmic component; InterPro IPR005669; KEGG: gym:GYMC10_5202 sulfate ABC transporter, periplasmic sulfate-binding protein; SPTR: Sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein
YP_004178638.1	COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: psl:Psta_3676 glycosyl transferase family 39; PFAM: glycosyl transferase family 39; SPTR: Glycosyl transferase family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004178639.1	COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950: IPR017228; KEGG: plm:Plim_0024 translation initiation factor SUI1; PFAM: translation initiation factor SUI1; SPTR: Putative uncharacterized protein; PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic
YP_004178640.1	COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR004507: IPR003382; KEGG: plm:Plim_2148 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases
YP_004178641.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198: IPR020904: IPR002347; KEGG: cyb:CYB_0005 short chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short chain dehydrogenase/reductase family; PFAM: short chain dehydrogenase
YP_004178642.1	COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR006371: IPR000537; KEGG: psl:Psta_1373 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase
YP_004178643.1	COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: bxe:Bxe_A2227 putative lipopolysaccharide biosynthesis-related membrane protein; PFAM: acyltransferase 3; SPTR: Putative lipopolysaccharide biosynthesis-related membrane protein; PFAM: Acyltransferase family
YP_004178644.1	COGs: COG2115 Xylose isomerase; InterPro IPR001998: IPR013452: IPR012307; KEGG: psl:Psta_4262 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase
YP_004178645.1	KEGG: psl:Psta_2505 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Proteins of 100 residues with WXG
YP_004178646.1	KEGG: psl:Psta_2506 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178647.1	KEGG: psl:Psta_2507 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178648.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543: IPR003593; KEGG: psl:Psta_2508 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; SPTR: Cell divisionFtsK/SpoIIIE; PFAM: FtsK/SpoIIIE family
YP_004178649.1	COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: psl:Psta_3800 protein of unknown function DUF182; PFAM: protein of unknown function DUF182; SPTR: Putative uncharacterized protein; PFAM: XdhC and CoxI family
YP_004178650.1	COGs: COG2068 Uncharacterized MobA-related protein; KEGG: psl:Psta_3801 MobA-like protein; SPTR: Uncharacterized MobA-related protein-like protein; PFAM: Uncharacterized protein family UPF0007
YP_004178651.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014021: IPR001650: IPR014014: IPR000629: IPR 014001: IPR011545; KEGG: psl:Psta_1620 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_004178652.1	KEGG: plm:Plim_2599 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178653.1	KEGG: ote:Oter_3848 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178654.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: dak:DaAHT2_1784 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein
YP_004178655.1	COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130: IPR020892; KEGG: ppf:Pput_1349 peptidyl-prolyl cis-trans isomerase, cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_004178656.1	InterPro IPR017896: IPR000813: IPR017900; KEGG: psl:Psta_3004 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain
YP_004178657.1	COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR002478; KEGG: psl:Psta_0223 methyltransferase small; SMART: PUA domain containing protein; SPTR: Putative uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase
YP_004178658.1	KEGG: dpo:Dpse_GA26185 GA26185 gene product from transcript GA26185-RA; SPTR: Putative uncharacterized protein
YP_004178659.1	KEGG: tro:trd_1801 hypothetical protein; SPTR: Putative membrane protein
YP_004178660.1	COGs: COG1162 GTPase; InterPro IPR010914: IPR004881; KEGG: psl:Psta_2967 ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; SPTR: Ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_004178661.1	COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR011762: IPR011763: IPR000022; KEGG: psl:Psta_0088 propionyl-CoA carboxylase; PFAM: carboxyl transferase; PRIAM: Methylcrotonoyl-CoA carboxylase; SPTR: Propionyl-CoA carboxylase; PFAM: Carboxyl transferase domain
YP_004178662.1	COGs: COG0369 Sulfite reductase alpha subunit (flavoprotein); InterProIPR017927: IPR001709: IPR012146: IPR008333: IPR 001433; KEGG: gvi:gvip312 ferredoxin--NADP+ reductase; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: Ferredoxin--NADP+ reductase; manually curated; PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_004178663.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115; KEGG: hoh:Hoch_3369 6-phosphogluconate dehydrogenase NAD-binding protein; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_004178664.1	COGs: COG0657 Esterase/lipase; KEGG: psl:Psta_2974 alpha/beta hydrolase fold-3 domain protein; SPTR: Alpha/beta hydrolase fold-3 domain protein; PFAM: alpha/beta hydrolase fold
YP_004178665.1	InterPro IPR002035: IPR013026; KEGG: dma:DMR_35140 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Tetratricopeptide TPR_2 repeat protein; manually curated; PFAM: von Willebrand factor type A domain
YP_004178666.1	COGs: COG0217 conserved hypothetical protein; InterPro IPR002876; KEGG: plm:Plim_2554 protein of unknown function DUF28; PFAM: protein of unknown function DUF28; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family
YP_004178667.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_2555 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004178668.1	COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: vha:VIBHAR_06660 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Beta-Ig-H3/fasciclin; PFAM: Fasciclin domain
YP_004178669.1	KEGG: psl:Psta_4659 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178670.1	COGs: COG0858 Ribosome-binding factor A; InterPro IPR000238: IPR020053; KEGG: psl:Psta_4658 ribosome-binding factor A; PFAM: ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_004178671.1	COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR000178: IPR005225: IPR006847: IPR000795: IPR 004161; KEGG: psl:Psta_4657 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; SPTR: Translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_004178672.1	COGs: COG0195 Transcription elongation factor; InterProIPR004088: IPR003029: IPR004087: IPR010213: IPR 013735; KEGG: plm:Plim_2559 transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; SMART: KH domain protein; SPTR: Transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication
YP_004178673.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: tte:TTE1767 Fe2+/Zn2+ uptake regulation proteins; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family
YP_004178674.1	COGs: COG0084 Mg-dependent DNase; InterPro IPR018228: IPR015991: IPR012278: IPR001130; KEGG: psl:Psta_3152 hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; SPTR: Hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; manually curated; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_004178675.1	COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR019775: IPR001680: IPR 019781; KEGG: rrs:RoseRS_0892 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: WD-40 repeat; PFAM: WD domain, G-beta repeat
YP_004178676.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR020635: IPR 002290: IPR017442: IPR005532; KEGG: plm:Plim_1473 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme
YP_004178677.1	InterProIPR019782: IPR017986: IPR018247: IPR001680: IPR 019781; KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: NB-ARC domain protein; PFAM: WD domain, G-beta repeat
YP_004178678.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: rba:RB5336 assimilatory nitrite reductase [NAD(P)H] small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Probable assimilatory nitrite reductase [NAD(P)H] small subunit; PFAM: Rieske [2Fe-2S] domain
YP_004178679.1	KEGG: psl:Psta_4540 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178680.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: psl:Psta_4539 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004178681.1	InterPro IPR001387; KEGG: ami:Amir_3407 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix
YP_004178682.1	InterPro IPR000866; KEGG: nca:Noca_1643 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; manually curated; PFAM: AhpC/TSA family
YP_004178683.1	KEGG: psl:Psta_1016 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178684.1	COGs: COG1196 Chromosome segregation ATPase; KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178685.1	COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterPro IPR001937; KEGG: nde:NIDE3393 galactose-1-phosphate uridylyltransferase; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: Galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1
YP_004178686.1	COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR015178: IPR004300: IPR015179; KEGG: psl:Psta_3212 4-alpha-glucanotransferase; PFAM: Domain of unknown function DUF1926; Domain of unknown function DUF1925; glycoside hydrolase family 57; PRIAM: 4-alpha-glucanotransferase; SPTR: Alpha-amylase; PFAM: Domain of unknown function (DUF1925); Glycosyl hydrolase family 57; Domain of unknown function (DUF1926)
YP_004178687.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: dal:Dalk_3474 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58
YP_004178688.1	COGs: COG0539 Ribosomal protein S1; InterPro IPR003029: IPR000110; KEGG: psl:Psta_0370 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_004178689.1	COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR017926: IPR004468: IPR017456: IPR000991; KEGG: psl:Psta_0161 CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_004178690.1	COGs: COG3119 Arylsulfatase A; InterPro IPR002052: IPR008265: IPR001087: IPR000917; KEGG: psl:Psta_3960 sulfatase; PFAM: sulfatase; lipolytic protein G-D-S-L family; SPTR: Choline sulfatase; PFAM: GDSL-like Lipase/Acylhydrolase; Sulfatase
YP_004178691.1	COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789: IPR003607: IPR006674; KEGG: dak:DaAHT2_0731 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; SPTR: Response regulator receiver modulated metal dependent phosphohydrolase; PFAM: HD domain; Response regulator receiver domain
YP_004178692.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817: IPR005110: IPR001453: IPR005111; KEGG: scl:sce9309 molybdenum cofactor biosynthesis protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: Molybdenum cofactor biosynthesis protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_004178693.1	KEGG: aav:Aave_4115 putative phage repressor; SPTR: Putative uncharacterized protein
YP_004178694.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR008271: IPR020635: IPR002290: IPR 017442; KEGG: hau:Haur_2960 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Transmembrane serine/threonine protein kinase D; PFAM: Protein kinase domain
YP_004178695.1	InterPro IPR017871; KEGG: cwo:Cwoe_4509 glycosyl transferase family 39; SPTR: Glycosyl transferase family 39
YP_004178696.1	COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: reu:Reut_A0291 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II
YP_004178697.1	COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: plm:Plim_0341 carbon storage regulator; PFAM: carbon storage regulator; SPTR: Carbon storage regulator homolog; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_004178698.1	InterPro IPR010791; KEGG: cch:Cag_0393 hydroxyneurosporene synthase CrtC; PFAM: hydroxyneurosporene synthase; SPTR: Hydroxyneurosporene synthase; PFAM: Hydroxyneurosporene synthase (CrtC)
YP_004178699.1	COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR019845: IPR002060; KEGG: mxa:MXAN_0896 phytoene synthetase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase; PFAM: Squalene/phytoene synthase
YP_004178700.1	COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR008150: IPR014105: IPR002937; KEGG: hau:Haur_3185 zeta-phytoene desaturase; PFAM: amine oxidase; SPTR: Zeta-phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase
YP_004178701.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: saq:Sare_4930 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase
YP_004178702.1	InterPro IPR005584; KEGG: ade:Adeh_1859 hypothetical protein; PFAM: protein of unknown function DUF329; SPTR: UPF0243 zinc-binding protein Adeh_1859; PFAM: Domain of unknown function (DUF329)
YP_004178703.1	COGs: COG2331 conserved hypothetical protein; InterPro IPR013429; KEGG: plm:Plim_2923 regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; SPTR: Regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family
YP_004178704.1	COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR000740; KEGG: tjr:TherJR_2451 GrpE protein; PFAM: GrpE protein; SPTR: GrpE protein; PFAM: GrpE
YP_004178705.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR001623: IPR001305: IPR012724: IPR003095: IPR 018253: IPR002939; KEGG: psl:Psta_3026 chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Chaperone protein dnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_004178706.1	COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844: IPR002423; KEGG: plm:Plim_2926 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_004178707.1	COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR001476: IPR018369: IPR020818; KEGG: psl:Psta_3024 chaperonin Cpn10; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit
YP_004178708.1	COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844: IPR002423; KEGG: psl:Psta_3023 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_004178709.1	KEGG: pno:SNOG_10790 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178710.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tro:trd_1849 glycosyl transferase, family 2:glycosyl transferase, group 1; PFAM: Methyltransferase type 11; SPTR: Glycosyl transferase, family 2:Glycosyl transferase, group 1; PFAM: Methyltransferase domain
YP_004178711.1	COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220: IPR005829; KEGG: psl:Psta_3336 dihydrodipicolinate synthetase; PFAM: dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase family
YP_004178712.1	COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR011530: IPR020596: IPR020598: IPR001737; KEGG: psl:Psta_2598 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: Ribosomal RNA small subunit methyltransferase A; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_004178713.1	COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: rba:RB12379 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase alpha chain; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_004178714.1	COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR000812: IPR005129; KEGG: mav:MAV_3276 arginine/ornithine transport system ATPase; PFAM: ArgK protein; SPTR: Arginine/ornithine transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase
YP_004178715.1	COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006158: IPR006098: IPR006159: IPR006099; KEGG: mxa:MXAN_2263 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase, alpha subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain
YP_004178716.1	COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006099; KEGG: rru:Rru_A2480 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase, heterodimeric type, beta chain
YP_004178717.1	COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR017821: IPR003702; KEGG: dal:Dalk_0129 succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; PRIAM: Acetyl-CoA hydrolase; SPTR: Succinate CoA transferase; TIGRFAM: succinate CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; Citrate lyase, alpha subunit (CitF); TIGRFAM: succinate CoA transferases
YP_004178718.1	COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: plt:Plut_1434 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; PRIAM: Oxaloacetate decarboxylase; SPTR: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit
YP_004178719.1	COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089; KEGG: cag:Cagg_0997 biotin/lipoyl attachment domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Biotin/lipoyl attachment domain-containing protein; PFAM: Biotin-requiring enzyme
YP_004178720.1	InterPro IPR005899; KEGG: caa:Caka_0798 sodium pump decarboxylase gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; SPTR: Sodium pump decarboxylase gamma subunit; PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit
YP_004178721.1	COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR011762: IPR011763: IPR000438: IPR000022; KEGG: sus:Acid_6960 carboxyl transferase; PFAM: carboxyl transferase; SPTR: Carboxyl transferase; PFAM: Carboxyl transferase domain
YP_004178722.1	InterPro IPR017515: IPR004360; KEGG: glo:Glov_3258 methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase
YP_004178723.1	COGs: COG3391 conserved hypothetical protein; InterPro IPR007312; KEGG: sli:Slin_6217 40-residue YVTN family beta-propeller repeat protein; PFAM: phosphoesterase; SPTR: 40-residue YVTN family beta-propeller repeat protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; Phosphoesterase family; 3-carboxy-cis,cis-muconate lactonizing enzyme
YP_004178724.1	COGs: COG1538 Outer membrane protein; KEGG: plm:Plim_2805 outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein
YP_004178725.1	InterPro IPR000788: IPR013344: IPR013678; KEGG: psl:Psta_0580 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase class II vitamin B12-dependent; ribonucleotide reductase large subunit; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Class II vitamin B12-dependent ribonucleotide reductase; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
YP_004178726.1	COGs: COG0261 Ribosomal protein L21; InterPro IPR001787: IPR018258; KEGG: psl:Psta_2437 ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_004178727.1	COGs: COG0052 Ribosomal protein S2; InterPro IPR001865: IPR018130: IPR005706; KEGG: psl:Psta_0952 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: Ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_004178728.1	COGs: COG0264 Translation elongation factor Ts; InterPro IPR001816: IPR018101: IPR014039; KEGG: ele:Elen_1104 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; SPTR: Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; TIGRFAM: translation elongation factor Ts
YP_004178729.1	COGs: COG0528 Uridylate kinase; InterPro IPR015963: IPR011817: IPR001048; KEGG: psl:Psta_0954 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Uridylate kinase; TIGRFAM: uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_004178730.1	COGs: COG0233 Ribosome recycling factor; InterPro IPR015998: IPR002661; KEGG: plm:Plim_3273 ribosome recycling factor; PFAM: ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_004178731.1	KEGG: sli:Slin_2345 oxidoreductase molybdopterin binding protein; SPTR: Oxidoreductase molybdopterin binding protein; PFAM: Oxidoreductase molybdopterin binding domain
YP_004178732.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_4074 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178733.1	KEGG: plm:Plim_3406 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178734.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR020635: IPR 002290: IPR017442: IPR010432; KEGG: rba:RB7928 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; RDD domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; RDD family
YP_004178735.1	KEGG: psp:PSPPH_1090 ribosomal subunit interface protein, putative; SPTR: Ribosomal subunit interface protein, putative; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein
YP_004178736.1	InterPro IPR018480; KEGG: mar:MAE_61060 hyalin repeat-containing protein; SPTR: Hyalin repeat protein
YP_004178737.1	KEGG: plm:Plim_3407 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178738.1	KEGG: yli:YALI0C22924g YALI0C22924p; SPTR: YALI0C22924p
YP_004178739.1	KEGG: cwo:Cwoe_0044 helix-turn-helix type 11 domain protein; SPTR: Helix-turn-helix type 11 domain protein
YP_004178740.1	KEGG: hor:Hore_13760 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178741.1	InterProIPR003961: IPR005084: IPR018247: IPR006626: IPR 006584: IPR011459; KEGG: sco:SCO7170 secreted sugar hydrolase; PFAM: Carbohydrate binding family 6; protein of unknown function DUF1565; Fibronectin type III domain protein; SMART: cellulose binding type IV; Parallel beta-helix repeat; Fibronectin type III domain protein; SPTR: Carbohydrate binding family 6; PFAM: Carbohydrate binding module (family 6); Fibronectin type III domain
YP_004178742.1	KEGG: fal:FRAAL6628 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178743.1	COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795: IPR005225: IPR006298: IPR004161: IPR 000640; KEGG: plm:Plim_1239 GTP-binding protein TypA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain
YP_004178744.1	KEGG: sus:Acid_2658 neuraminidase (sialidase)-like protein; SPTR: Neuraminidase (Sialidase)-like protein; PFAM: BNR/Asp-box repeat
YP_004178746.1	KEGG: gob:Gobs_5081 glycoprotein; SPTR: Glycoprotein
YP_004178747.1	InterPro IPR006118: IPR003644; KEGG: mpd:MCP_2796 hypothetical protein; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Probable aggregation factor core protein MAFp3, isoform C; PFAM: Calx-beta domain
YP_004178748.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: amr:AM1_G0129 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004178749.1	KEGG: cja:CJA_3342 nucleoside-transport system protein; SPTR: Nucleoside:H symporter; PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter
YP_004178750.1	InterPro IPR018506; KEGG: rba:RB6867 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1570)
YP_004178751.1	InterPro IPR001128; KEGG: mrd:Mrad2831_3371 cytochrome P450; PFAM: cytochrome P450; SPTR: Cytochrome P450; PFAM: Cytochrome P450
YP_004178752.1	KEGG: cre:CHLREDRAFT_10029 fibrocystin-L-like protein; SPTR: Minus agglutinin
YP_004178753.1	COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR010916; KEGG: plm:Plim_0066 MmpL domain protein; SPTR: Probable membrane protein-putative transporter; PFAM: MMPL family
YP_004178754.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838: IPR004839; KEGG: sfu:Sfum_0054 aminotransferase, class I and II; PFAM: aminotransferase class I and II; SPTR: LL-diaminopimelate aminotransferase; PFAM: Aminotransferase class I and II
YP_004178755.1	COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: psl:Psta_2023 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; SPTR:2-amino-4-hydroxy-6-hydroxymethyldihydropterid inepyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_004178756.1	COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034: IPR018356: IPR014036; KEGG: psl:Psta_3278 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: Transcriptional regulator, DeoR family; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_004178757.1	COGs: COG4869 Propanediol utilization protein; InterPro IPR008300; KEGG: plm:Plim_1757 propanediol utilization protein; PFAM: Propanediol utilization protein; SPTR: Propanediol utilization protein; PFAM: Propanediol utilisation protein PduL
YP_004178758.1	COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808: IPR000249; KEGG: psl:Psta_3280 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein; PFAM: BMC domain
YP_004178759.1	COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808: IPR000249; KEGG: psl:Psta_3281 microcompartments protein; PFAM: microcompartments protein; SPTR: Ethanolamine utilization protein; PFAM: BMC domain
YP_004178760.1	COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: psl:Psta_3281 microcompartments protein; PFAM: microcompartments protein; SPTR: Putative uncharacterized protein; PFAM: BMC domain
YP_004178761.1	COGs: COG0282 Acetate kinase; InterPro IPR000890: IPR004372; KEGG: psl:Psta_3282 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_004178762.1	COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: psl:Psta_3283 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Probable ethanolamine utilization protein EutN; PFAM: Ethanolamine utilisation protein EutN/carboxysome
YP_004178763.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR012408: IPR015590; KEGG: plm:Plim_1751 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Ethanolamine utilization protein EutE; PFAM: Aldehyde dehydrogenase family
YP_004178764.1	COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: plm:Plim_1750 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Putative uncharacterized protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome
YP_004178765.1	KEGG: psl:Psta_3287 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; SPTR: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; PFAM: Ethanolamine utilisation protein EutN/carboxysome
YP_004178766.1	COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: plm:Plim_1747 class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; SPTR: Class II aldolase/adducin family protein; PFAM: Class II Aldolase and Adducin N-terminal domain
YP_004178767.1	COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001557: IPR018177: IPR001236; KEGG: psl:Psta_3289 lactate/malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: L-lactate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain
YP_004178768.1	KEGG: ote:Oter_4087 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178769.1	KEGG: azl:AZL_b00450 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178770.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR019782: IPR017986: IPR020472: IPR 017441: IPR008271: IPR019775: IPR020635: IPR002290: IPR001680:I PR017442: IPR019781; KEGG: tcu:Tcur_0419 serine/threonine protein kinase with WD40 repeats; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; WD-40 repeat-containing protein; SPTR: Serine/threonine protein kinase with WD40 repeats; PFAM: Protein kinase domain; WD domain, G-beta repeat
YP_004178771.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR019782: IPR017986: IPR017441: IPR 008271: IPR020635: IPR002290: IPR001680: IPR017442: IPR019781; KEGG: sro:Sros_7190 WD40 repeat-domain-containing protein-like protein; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; WD-40 repeat-containing protein; SPTR: WD40 repeat-domain-containing protein-like protein; PFAM: Protein kinase domain; WD domain, G-beta repeat
YP_004178772.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: rca:Rcas_0781 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_004178773.1	COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR004036: IPR003265: IPR003651; KEGG: plm:Plim_3349 A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; SPTR: A/G-specific adenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: A/G-specific adenine glycosylase
YP_004178774.1	COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: abi:Aboo_1239 nucleoside-diphosphate kinase; PFAM: nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase
YP_004178775.1	KEGG: psl:Psta_3854 protein of unknown function DUF1570; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1570)
YP_004178776.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: nmi:NMO_0284 rhodanese-related sulfur transferase; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain
YP_004178777.1	InterPro IPR001478; KEGG: rmr:Rmar_0910 glycosyl hydrolase BNR repeat-containing protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR/Asp-box repeat
YP_004178778.1	COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795: IPR004540: IPR005225: IPR004161: IPR 005517: IPR000640; KEGG: sti:Sthe_1033 translation elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; SPTR: Strongly similar to translation elongation factor EF-G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_004178779.1	COGs: COG4712 conserved hypothetical protein; InterPro IPR001012; KEGG: msv:Mesil_2611 Rad52/22 double-strand break repair protein; PFAM: UBX; SPTR: Rad52/22 double-strand break repair protein; PFAM: Rad52/22 family double-strand break repair protein
YP_004178780.1	COGs: COG3429 Glucose-6-P dehydrogenase subunit; InterPro IPR019297; KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein; PFAM: Glucose-6-phosphate dehydrogenase subunit; SPTR: Glucose-6-P dehydrogenase subunit-like protein; PFAM: Glucose-6-phosphate dehydrogenase subunit
YP_004178781.1	KEGG: psl:Psta_2467 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178782.1	InterPro IPR007922; KEGG: psl:Psta_1043 protein of unknown function DUF721; PFAM: protein of unknown function DUF721; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF721)
YP_004178783.1	COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR000565: IPR001241: IPR018522: IPR003594: IPR 013506: IPR002288; KEGG: psl:Psta_1044 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: DNA gyrase subunit B; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit
YP_004178784.1	COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterProIPR007527: IPR014021: IPR001650: IPR014001: IPR 000330; KEGG: sus:Acid_3907 SNF2-related protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: SNF2-related protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; SWIM zinc finger
YP_004178785.1	KEGG: psl:Psta_2349 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178786.1	COGs: COG1408 phosphohydrolase; InterPro IPR006311: IPR004843; KEGG: zpr:ZPR_1393 calcineurin-like phosphoesterase; PFAM: metallophosphoesterase; SPTR: Calcineurin-like phosphoesterase; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004178787.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR000834: IPR002469; KEGG: sus:Acid_5302 peptidase S9B dipeptidylpeptidase IV subunit; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: Peptidase S9B, dipeptidylpeptidase IV domain protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; Zinc carboxypeptidase
YP_004178788.1	COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR003335: IPR005791: IPR005665; KEGG: plm:Plim_1349 protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Protein-export membrane protein secD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_004178789.1	COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: cpb:Cphamn1_2348 preprotein translocase, YajC subunit; PFAM: YajC family protein; SPTR: Putative uncharacterized protein; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit
YP_004178790.1	COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; InterPro IPR004803: IPR002616; KEGG: plm:Plim_1347 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_004178791.1	COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterPro IPR019734: IPR013026: IPR011260: IPR001440; KEGG: psl:Psta_3991 RNA polymerase alpha subunit domain protein; PFAM: RNA polymerase alpha subunit domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: RNA polymerase alpha subunit domain protein; PFAM: Tetratricopeptide repeat; Bacterial RNA polymerase, alpha chain C terminal domain
YP_004178792.1	KEGG: yli:YALI0E22572g YALI0E22572p; SPTR: LysM domain protein
YP_004178793.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR008271: IPR020635: IPR002290: IPR 017442; KEGG: plm:Plim_3456 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain
YP_004178794.1	KEGG: psl:Psta_0447 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178795.1	InterPro IPR000297; KEGG: plm:Plim_3331 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Probable peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain
YP_004178796.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_2840 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178797.1	KEGG: pna:Pnap_4853 signal peptide prediction; SPTR: Putative uncharacterized protein
YP_004178798.1	KEGG: gau:GAU_1101 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178799.1	COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151; KEGG: gau:GAU_1102 peptidase S41A family protein; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Peptidase S41A family protein; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_004178800.1	COGs: COG0432 conserved hypothetical protein; InterPro IPR018356: IPR001602; KEGG: hoh:Hoch_6559 protein of unknown function UPF0047; PFAM: protein of unknown function UPF0047; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme
YP_004178801.1	KEGG: psl:Psta_1715 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase
YP_004178802.1	COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408: IPR004143; KEGG: hne:HNE_1759 biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: Biotin [acetyl-CoA-carboxylase] ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_004178803.1	KEGG: nth:Nther_2175 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178804.1	KEGG: gga:422595 lin-54 homolog (C. elegans); SPTR: Putative uncharacterized protein
YP_004178805.1	InterPro IPR001120: IPR012902; KEGG: rba:RB1052 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004178806.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: plm:Plim_0256 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_004178807.1	KEGG: psl:Psta_2902 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178808.1	InterPro IPR004518; KEGG: psl:Psta_2903 MazG nucleotide pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: MazG nucleotide pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase domain
YP_004178809.1	COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR008284: IPR020817: IPR001453; KEGG: pca:Pcar_2074 molybdenum cofactor biosynthesis protein; PFAM: molybdopterin binding domain; SPTR: Molybdenum cofactor biosynthesis mog; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_004178810.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1031 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1
YP_004178811.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR020635: IPR 002290: IPR017442; KEGG: plm:Plim_1535 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain
YP_004178812.1	COGs: COG1117 ABC-type phosphate transport system ATPase component; InterProIPR000387: IPR003439: IPR017871: IPR016130: IPR 003593: IPR003595: IPR000340; KEGG: dac:Daci_1595 ABC transporter related; PFAM: ABC transporter related; Dual specificity protein phosphatase; SMART: AAA ATPase; Protein-tyrosine phosphatase, catalytic; SPTR: ABC transporter related; PFAM: ABC transporter; Dual specificity phosphatase, catalytic domain
YP_004178813.1	COGs: COG0515 Serine/threonine protein kinase; InterPro IPR000719: IPR020635: IPR002290: IPR017442; KEGG: scl:sce9150 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Protein kinase; PFAM: Protein kinase domain
YP_004178814.1	InterPro IPR013216; KEGG: gsu:GSU0628 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Conserved domain protein; PFAM: Methyltransferase domain
YP_004178815.1	InterPro IPR020084: IPR000086; KEGG: chu:CHU_2826 pyrophosphohydrolase related protein; PFAM: NUDIX hydrolase; SPTR: Pyrophosphohydrolase related protein; PFAM: NUDIX domain
YP_004178816.1	COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR005810: IPR017440: IPR003781: IPR005811; KEGG: mxa:MXAN_3542 succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit
YP_004178817.1	COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterPro IPR005809: IPR017866: IPR013650: IPR005811; KEGG: rba:RB10617 succinyl-CoA synthetase (beta subunit); PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit
YP_004178818.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: psl:Psta_1640 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyl transferase; PFAM: Glycosyl transferases group 1
YP_004178819.1	COGs: COG0421 Spermidine synthase; InterPro IPR001045; KEGG: kfl:Kfla_1557 spermine synthase; PFAM: Spermine synthase; SPTR: Spermine synthase; PFAM: Spermine/spermidine synthase
YP_004178820.1	COGs: COG0628 permease; InterPro IPR002549; KEGG: hoh:Hoch_2065 protein of unknown function UPF0118; PFAM: protein of unknown function UPF0118; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF20
YP_004178821.1	COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); InterProIPR020667: IPR014762: IPR014763: IPR003594: IPR 013507: IPR014790; KEGG: plm:Plim_1838 DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; SPTR: DNA mismatch repair protein MutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL
YP_004178822.1	COGs: COG1521 Putative transcriptional regulator protein; InterPro IPR004619; KEGG: psl:Psta_1900 putative transcriptional acitvator, Baf family; PFAM: Bvg accessory factor; SPTR: Putative uncharacterized protein; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III
YP_004178823.1	COGs: COG0536 GTPase; InterProIPR006073: IPR006074: IPR014100: IPR006169: IPR 002917; KEGG: psl:Psta_1899 GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; SPTR: GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; small GTP-binding protein domain
YP_004178824.1	COGs: COG0211 Ribosomal protein L27; InterPro IPR001684: IPR018261; KEGG: plm:Plim_0238 ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_004178825.1	COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR004479: IPR018317; KEGG: azl:AZL_006140 queuosine biosynthesis protein; PFAM: Queuosine synthesis-like; SPTR: Queuosine biosynthesis protein; TIGRFAM: exsB protein; PFAM: ExsB; TIGRFAM: exsB protein
YP_004178827.1	COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR020474: IPR003591: IPR001611; KEGG: npu:Npun_F6039 Miro domain-containing protein; PFAM: leucine-rich repeat-containing protein; PRIAM: Adenylate cyclase; SPTR: Predicted protein; PFAM: Leucine Rich Repeat
YP_004178828.1	COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: psl:Psta_0480 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative uncharacterized protein; PFAM: NfeD-like
YP_004178829.1	COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: plm:Plim_0730 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative uncharacterized protein; PFAM: NfeD-like
YP_004178830.1	KEGG: sus:Acid_0265 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178831.1	InterPro IPR003737; KEGG: nfa:nfa45970 hypothetical protein; PFAM: LmbE family protein; SPTR: Putative uncharacterized protein; PFAM: GlcNAc-PI de-N-acetylase
YP_004178832.1	COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR018321: IPR006148; KEGG: coc:Coch_2021 glucosamine-6-phosphate deaminase-like protein; PFAM: glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine-6-phosphate isomerase; tmRNA as predicted by Rfam (RF00023), score 139.03; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase
YP_004178833.1	InterPro IPR013424: IPR011449; KEGG: neu:NE2239 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Probable aggregation factor core protein MAFp3, isoform C; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004178834.1	InterPro IPR019734: IPR013026; KEGG: gem:GM21_3832 TPR repeat-containing protein; SPTR: Serine/threonine protein kinase containing TPR domain
YP_004178835.1	COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734: IPR013026: IPR001440; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein
YP_004178836.1	KEGG: dac:Daci_1596 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178837.1	InterPro IPR017909: IPR010869; KEGG: psl:Psta_4556 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004178838.1	InterPro IPR009056: IPR011444; KEGG: psl:Psta_4557 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553)
YP_004178839.1	InterPro IPR017909: IPR006311: IPR010869; KEGG: psl:Psta_1944 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004178840.1	KEGG: tva:TVAG_204370 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178841.1	InterPro IPR003675; KEGG: rrs:RoseRS_1918 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family
YP_004178842.1	KEGG: cyn:Cyan7425_0636 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Sulfotransferase domain
YP_004178843.1	KEGG: fal:FRAAL3971 putative short-chain acyl dehydrogenase; SPTR: Putative short-chain acyl dehydrogenase
YP_004178844.1	COGs: COG1117 ABC-type phosphate transport system ATPase component; InterProIPR003439: IPR015850: IPR017871: IPR003593: IPR 005670; KEGG: msl:Msil_2650 phosphate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_004178845.1	COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515: IPR005672; KEGG: pfs:PFLU3316 phosphate transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate transport system permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_004178846.1	COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515: IPR011864; KEGG: msl:Msil_2652 phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC
YP_004178847.1	COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR005673: IPR006059; KEGG: gvi:gll2034 phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein
YP_004178848.1	KEGG: rlt:Rleg2_2803 putative transmembrane anti-sigma factor; SPTR: Putative transmembrane anti-sigma factor
YP_004178849.1	KEGG: nhl:Nhal_3367 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated
YP_004178850.1	COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496; KEGG: pde:Pden_1336 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; PRIAM: Phosphoribosyl-AMP cyclohydrolase; SPTR: Phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase
YP_004178851.1	KEGG: tel:tlr2278 hypothetical protein; SPTR: Tlr2278 protein; PFAM: DsrE/DsrF-like family
YP_004178852.1	COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR018022: IPR002627; KEGG: psl:Psta_4706 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA)
YP_004178853.1	InterPro IPR019734: IPR013026; KEGG: psl:Psta_3994 hypothetical protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein
YP_004178854.1	COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012837: IPR007197; KEGG: mxa:MXAN_2901 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Putative radical SAM domain protein; PFAM: Radical SAM superfamily
YP_004178855.1	COGs: COG0148 Enolase; InterPro IPR000941: IPR020809: IPR020811: IPR020810; KEGG: dae:Dtox_3933 enolase; PFAM: Enolase-like; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_004178856.1	InterPro IPR020845; KEGG: ade:Adeh_0700 type III secretion exporter; SPTR: Ribose transport system permease rbsC
YP_004178857.1	COGs: COG0588 Phosphoglycerate mutase 1; InterPro IPR005952: IPR001345: IPR013078; KEGG: cpc:Cpar_1493 phosphoglyceromutase; PFAM: Phosphoglycerate mutase; PRIAM: Bisphosphoglycerate mutase; SPTR: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1
YP_004178858.1	InterPro IPR017909: IPR006076; KEGG: dfe:Dfer_4473 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: FAD dependent oxidoreductase
YP_004178859.1	KEGG: rmr:Rmar_1662 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178860.1	COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: mxa:MXAN_6849 peptidyl-prolyl cis-trans isomerase, FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_004178861.1	COGs: COG0393 conserved hypothetical protein; InterPro IPR002765; KEGG: eba:ebA2875 hypothetical protein; PFAM: protein of unknown function DUF74; SPTR: UPF0145 protein AZOSEA16190; manually curated; PFAM: Domain of unknown function (DUF74)
YP_004178862.1	COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: dae:Dtox_0578 integral membrane protein TerC; PFAM: Integral membrane protein TerC; SPTR: Membrane protein, TerC family; PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YkoY family
YP_004178863.1	KEGG: azo:azo0200 exonuclease SbcC, putative; SPTR: Exonuclease SbcC, putative
YP_004178864.1	KEGG: cpb:Cphamn1_0874 D12 class N6 adenine-specific DNA methyltransferase; SPTR: D12 class N6 adenine-specific DNA methyltransferase
YP_004178865.1	COGs: COG2344 AT-rich DNA-binding protein; InterPro IPR009718: IPR003781; KEGG: psl:Psta_1966 CoA-binding domain protein; PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; SPTR: CoA-binding domain protein; PFAM: CoA binding domain; Putative DNA-binding protein N-terminus
YP_004178866.1	COGs: COG0531 Amino acid transporter; InterPro IPR002293: IPR004841; KEGG: hoh:Hoch_1917 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region; PFAM: Amino acid permease
YP_004178867.1	InterPro IPR004155; KEGG: rrs:RoseRS_3392 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat
YP_004178868.1	KEGG: syg:sync_1768 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178869.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR020635: IPR 002290: IPR017442; KEGG: plm:Plim_3104 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Tyrosine protein kinase:Serine/threonine protein kinase:PASTA; PFAM: Protein kinase domain
YP_004178870.1	KEGG: ava:Ava_4226 peptidase S8/S53 subtilisin kexin sedolisin; SPTR: APHP domain protein
YP_004178871.1	KEGG: tra:Trad_2522 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178872.1	COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: plm:Plim_1981 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_004178873.1	COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: bpt:Bpet2495 putative glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_004178874.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR001638: IPR010065; KEGG: tai:Taci_0574 polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_004178875.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; KEGG: tye:THEYE_A1783 ceramide glucosyltransferase, putative; PRIAM: Ceramide glucosyltransferase; SPTR: Ceramide glucosyltransferase, putative; TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI
YP_004178876.1	InterPro IPR017909; KEGG: rfr:Rfer_1421 thiopurine S-methyltransferase; SPTR: Secreted protein
YP_004178877.1	COGs: COG0466 ATP-dependent Lon protease; InterProIPR001984: IPR008268: IPR003111: IPR003593: IPR 004815: IPR003959; KEGG: dtu:Dtur_1560 ATP-dependent protease La; PFAM: AAA ATPase central domain protein; peptidase S16 lon domain protein; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_004178878.1	COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR017909: IPR020471: IPR006311: IPR001395; KEGG: sus:Acid_7548 oxidoreductase; PFAM: aldo/keto reductase; SPTR: Oxidoreductase, aldo/keto reductase family; PFAM: Aldo/keto reductase family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004178879.1	COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: kra:Krad_4167 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Carbon starvation protein CstA; PFAM: Carbon starvation protein CstA
YP_004178880.1	COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: mxa:MXAN_3138 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Glucose / Sorbosone dehydrogenase; TIGRFAM: conserved hypothetical protein, HNE_0200 family
YP_004178882.1	COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: psl:Psta_2136 protein of unknown function DUF140; PFAM: protein of unknown function DUF140; SPTR: Probable permease of ABC transporter; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_004178883.1	COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: psl:Psta_2135 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004178884.1	COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: psl:Psta_2134 mammalian cell entry related domain protein; PFAM: Mammalian cell entry related domain protein; SPTR: Putative uncharacterized protein; PFAM: mce related protein
YP_004178885.1	InterPro IPR019734: IPR013026; KEGG: cts:Ctha_0597 TPR repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat
YP_004178886.1	COGs: COG1768 phosphohydrolase; InterPro IPR004843; KEGG: hau:Haur_4804 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_004178887.1	KEGG: psl:Psta_2876 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178888.1	COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR011914: IPR004821: IPR011611: IPR004820; KEGG: plm:Plim_0898 cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; SPTR: Cytidyltransferase-related domain protein; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain
YP_004178889.1	COGs: COG4637 ATPase; InterPro IPR003395; KEGG: alv:Alvin_0247 SMC domain protein; PFAM: SMC domain protein; SPTR: SMC domain protein
YP_004178890.1	KEGG: alv:Alvin_0246 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178891.1	InterPro IPR017936: IPR001258; KEGG: psl:Psta_3322 NHL repeat containing protein; PFAM: NHL repeat containing protein; SPTR: Putative uncharacterized protein; PFAM: NHL repeat; AhpC/TSA family
YP_004178892.1	COGs: COG3391 conserved hypothetical protein; InterPro IPR017936: IPR001258; KEGG: psl:Psta_3322 NHL repeat containing protein; PFAM: NHL repeat containing protein; SPTR: NHL repeat containing protein; PFAM: NHL repeat; AhpC/TSA family
YP_004178893.1	KEGG: tcu:Tcur_2365 glucose-methanol-choline oxidoreductase; SPTR: AMP-dependent synthetase and ligase
YP_004178894.1	COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR000808: IPR002744: IPR019591; KEGG: sti:Sthe_0642 protein of unknown function DUF59; PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; SPTR: Putative uncharacterized protein; PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; Anion-transporting ATPase
YP_004178895.1	KEGG: ade:Adeh_2641 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178896.1	InterPro IPR008915; KEGG: plm:Plim_2044 peptidase M50; PFAM: peptidase M50; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M50
YP_004178897.1	KEGG: plm:Plim_1832 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178898.1	KEGG: plm:Plim_1833 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178899.1	KEGG: nca:Noca_1954 putative lipoprotein; SPTR: Putative lipoprotein
YP_004178900.1	KEGG: bac:BamMC406_3019 type VI secretion system Vgr family protein; SPTR: Type VI secretion system Vgr family protein
YP_004178901.1	KEGG: rba:RB11569 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178902.1	KEGG: nca:Noca_4359 ATPase domain-containing protein; SPTR: ATP-binding region, ATPase domain protein domain protein
YP_004178903.1	KEGG: psl:Psta_2465 MotA/TolQ/ExbB proton channel; SPTR: Probable biopolymer transport ExbB-related protein; PFAM: MotA/TolQ/ExbB proton channel family
YP_004178904.1	KEGG: hoh:Hoch_4942 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178905.1	KEGG: rrs:RoseRS_1099 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004178906.1	KEGG: spu:577326 similar to Cpsf6 protein; SPTR: Extensin-like protein; TIGRFAM: conserved hypothetical protein TIGR01244
YP_004178907.1	COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: rmr:Rmar_1191 pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase
YP_004178908.1	COGs: COG0585 conserved hypothetical protein; InterPro IPR011760: IPR020119: IPR001656; KEGG: plm:Plim_3118 tRNA pseudouridine synthase D TruD; PFAM: tRNA pseudouridine synthase D TruD; SPTR: tRNA pseudouridine synthase D TruD; PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family
YP_004178909.1	KEGG: plm:Plim_0875 Flp/Fap pilin component; SPTR: Putative uncharacterized protein; PFAM: Flp/Fap pilin component
YP_004178910.1	COGs: COG0062 conserved hypothetical protein; InterPro IPR004443; KEGG: mgm:Mmc1_3307 carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain-containing protein; SPTR: Carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; TIGRFAM: yjeF N-terminal region
YP_004178911.1	KEGG: hsa:643314 KIAA0754; SPTR: Uncharacterized protein KIAA0754
YP_004178912.1	COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: psl:Psta_3742 peptidase M28; PFAM: peptidase M28; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M28
YP_004178913.1	COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000842: IPR000169: IPR005946: IPR000836; KEGG: plm:Plim_0451 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_004178914.1	COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR018517: IPR004652: IPR001269; KEGG: plm:Plim_2300 TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; SPTR: TIM-barrel protein, nifR3 family; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family
YP_004178915.1	COGs: COG0061 sugar kinase; InterPro IPR002504; KEGG: plm:Plim_1521 ATP-NAD/AcoX kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD kinase
YP_004178916.1	COGs: COG1154 Deoxyxylulose-5-phosphate synthase; InterPro IPR005477: IPR005475: IPR005476; KEGG: plm:Plim_2440 deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_004178917.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: alv:Alvin_0767 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase
YP_004178918.1	InterPro IPR003761; KEGG: hch:HCH_05864 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; SPTR: Exodeoxyribonuclease 7 small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit
YP_004178919.1	COGs: COG0062 conserved hypothetical protein; InterPro IPR004443; KEGG: rxy:Rxyl_0802 YjeF-related protein-like protein; PFAM: YjeF-family domain-containing protein; SPTR: Carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; TIGRFAM: yjeF N-terminal region
YP_004178920.1	COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376: IPR001753; KEGG: msv:Mesil_1247 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family
YP_004178921.1	COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001972: IPR001107; KEGG: pca:Pcar_2837 membrane protease subunit, stomatin/prohibitin-like; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family
YP_004178922.1	InterPro IPR004843; KEGG: gau:GAU_1565 UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; SPTR: UDP-2,3-diacylglucosamine hydrolase; PFAM: Calcineurin-like phosphoesterase
YP_004178923.1	COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: pca:Pcar_1329 beta-lactamase superfamily hydrolase; SPTR: Metal-dependent hydrolases of the beta-lactamase superfamily I; PFAM: Metallo-beta-lactamase superfamily
YP_004178924.1	InterPro IPR011637; KEGG: cpi:Cpin_4093 DoxX family protein; PFAM: DoxX family protein; SPTR: DoxX family protein; PFAM: DoxX
YP_004178925.1	COGs: COG0669 Phosphopantetheine adenylyltransferase; InterPro IPR001980: IPR004821: IPR004820; KEGG: plm:Plim_1290 pantetheine-phosphate adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; manually curated; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_004178926.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: psl:Psta_3767 aminotransferase class V; PFAM: aminotransferase class V; SPTR: Aminotransferase class V; PFAM: Aminotransferase class-V
YP_004178927.1	InterPro IPR008454; KEGG: ami:Amir_2421 conserved repeat domain protein; PFAM: Cna B domain protein; SPTR: Conserved repeat domain protein; PFAM: Cna protein B-type domain
YP_004178928.1	KEGG: plm:Plim_2486 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178929.1	COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462; KEGG: gob:Gobs_4045 CDP-diacylglycerol-cholineO-phosphatidyl transferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol-choline O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004178930.1	KEGG: psl:Psta_3977 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178931.1	KEGG: psl:Psta_3976 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178932.1	COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: afw:Anae109_3492 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; manually curated; PFAM: Flavin containing amine oxidoreductase
YP_004178933.1	COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR018089: IPR011995: IPR001754; KEGG: psl:Psta_1002 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2
YP_004178934.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR008391; KEGG: rba:RB5616 hypothetical protein; PFAM: Acetyl xylan esterase; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family
YP_004178936.1	COGs: COG4935 Regulatory P domain of the subtilisin-like proprotein convertase and other protease; InterPro IPR018247: IPR002884; KEGG: scl:sce1039 hypothetical protein; PFAM: Proprotein convertase P; SPTR: Serine protease, subtilase family protein; PFAM: Proprotein convertase P-domain
YP_004178937.1	InterPro IPR006626: IPR003644: IPR001434: IPR002884; KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; PFAM: Proprotein convertase P; SMART: Na-Ca exchanger/integrin-beta4; Parallel beta-helix repeat; SPTR: Integrin alpha chain; TIGRFAM: conserved repeat domain protein; PFAM: Calx-beta domain; Proprotein convertase P-domain; TIGRFAM: conserved repeat domain
YP_004178938.1	COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR017926: IPR010075: IPR011698; KEGG: adg:Adeg_0621 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: DJ-1/PfpI family; TIGRFAM: phosphoribosylformylglycinamidine synthase I
YP_004178939.1	KEGG: hoh:Hoch_4264 protein of unknown function DUF88; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88
YP_004178940.1	COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR010074: IPR000728: IPR010918; KEGG: plm:Plim_1829 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II
YP_004178941.1	COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: dau:Daud_1182 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase
YP_004178942.1	KEGG: plm:Plim_3162 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178943.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943: IPR014284: IPR009042: IPR007627: IPR 007624: IPR007630; KEGG: rba:RB3727 RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004178944.1	KEGG: plm:Plim_0226 signal peptide-containing protein; SPTR: Putative uncharacterized protein
YP_004178945.1	InterPro IPR000253; KEGG: psl:Psta_2773 FHA domain containing protein; PFAM: Forkhead-associated protein; SPTR: FHA domain containing protein
YP_004178946.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR020635: IPR002290: IPR 017442; KEGG: psl:Psta_2774 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004178947.1	KEGG: fre:Franean1_2472 copper resistance protein CopC; SPTR: Copper resistance protein CopC
YP_004178948.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: psl:Psta_2776 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Probable RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004178949.1	KEGG: rba:RB1994 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178950.1	COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658: IPR016303: IPR016037; KEGG: rsc:RCFBP_10481 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_004178951.1	COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: psl:Psta_1070 DNA protecting protein DprA; PFAM: SMF family protein; SPTR: DNA processing chain A; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_004178952.1	KEGG: plm:Plim_2849 tyrosine protein kinase; SPTR: Tyrosine protein kinase
YP_004178953.1	KEGG: hmu:Hmuk_0186 hypothetical protein
YP_004178954.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: psl:Psta_4154 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase-like protein; PFAM: Transglutaminase-like superfamily
YP_004178955.1	COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: gur:Gura_1842 UbiD family decarboxylase; PFAM: Carboxylyase-related protein; SPTR: UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases
YP_004178956.1	KEGG: plm:Plim_3517 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178958.1	COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR020081; KEGG: tfu:Tfu_2476 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_004178959.1	KEGG: sti:Sthe_2169 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178960.1	KEGG: cdi:DIP0772 putative ATP-dependent DNA helicase; SPTR: Putative ATP-dependent DNA helicase
YP_004178961.1	COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR006935: IPR001650: IPR014001: IPR001161: IPR 014021; KEGG: mta:Moth_1918 DEAD/DEAH box helicase-like; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase-like; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_004178962.1	KEGG: hoh:Hoch_4851 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178963.1	COGs: COG1203 helicase; InterPro IPR013444: IPR006483; KEGG: hoh:Hoch_4850 CRISPR-associated helicase Cas3, Anaes-subtype; SPTR: CRISPR-associated helicase Cas3, Anaes-subtype; TIGRFAM: CRISPR-associated helicase Cas3, Anaes-subtype; CRISPR-associated HD domain protein; TIGRFAM: CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase Cas3, Anaes-subtype
YP_004178964.1	InterPro IPR019089; KEGG: hoh:Hoch_4849 hypothetical protein; PFAM: CRISPR-associated protein, GSU0054; SPTR: Putative uncharacterized protein; PFAM: CRISPR-associated protein, GSU0054 family (Cas_GSU0054); TIGRFAM: CRISPR-associated protein, GSU0054 family
YP_004178965.1	InterPro IPR013403; KEGG: hoh:Hoch_4848 CRISPR-associated protein GSU0053; PFAM: CRISPR-associated protein GSU0053; SPTR: CRISPR-associated protein GSU0053; PFAM: CRISPR-associated protein GSU0053 (Cas_GSU0053); TIGRFAM: CRISPR-associated protein, GSU0053 family, N-terminal domain
YP_004178966.1	InterPro IPR007029; KEGG: psl:Psta_0875 hypothetical protein; PFAM: YHS domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: YHS domain
YP_004178967.1	COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836: IPR005904; KEGG: psl:Psta_1642 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: Hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_004178968.1	InterPro IPR000253; KEGG: scl:sce6746 sigma-54 dependent transcriptional regulator; PFAM: Forkhead-associated protein; SPTR: Whole genome shotgun sequence assembly, scaffold_139; PFAM: FHA domain
YP_004178969.1	KEGG: ptm:GSPATT00033131001 hypothetical protein; SPTR: Chromosome undetermined scaffold_134, whole genome shotgun sequence
YP_004178970.1	InterPro IPR002545; KEGG: enc:ECL_03259 purine-binding chemotaxis protein CheW; PFAM: CheW domain protein; SPTR: Purine-binding chemotaxis protein CheW; PFAM: CheW-like domain
YP_004178971.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089: IPR004090; KEGG: cyb:CYB_1935 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_004178972.1	COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207: IPR004105: IPR003594: IPR002545: IPR 001789: IPR004358: IPR005467; KEGG: aeh:Mlg_0359 CheA signal transduction histidine kinases; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; SPTR: CheA signal transduction histidine kinases; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_004178973.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: afw:Anae109_0804 multi-sensor signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain
YP_004178974.1	KEGG: dgr:Dgri_GH24162 GH24162 gene product from transcript GH24162-RA; SPTR: Kinesin K39, putative (ISS)
YP_004178975.1	KEGG: scl:sce4929 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178976.1	COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: psl:Psta_4609 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme
YP_004178977.1	KEGG: psl:Psta_4608 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178978.1	InterPro IPR010916; KEGG: psl:Psta_4607 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178979.1	KEGG: caa:Caka_2983 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178980.1	KEGG: bmy:Bm1_35930 Kelch-like protein X
YP_004178981.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR004358: IPR 005467; KEGG: plm:Plim_3217 ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: Sensory transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004178982.1	KEGG: gga:424533 vitellogenin 2; SPTR: Vitellogenin
YP_004178983.1	COGs: COG0443 Molecular chaperone; InterPro IPR001023: IPR018181; KEGG: sfu:Sfum_0343 DnaK-related protein; SPTR: DnaK-related protein; PFAM: DNA-K related protein; Hsp70 protein
YP_004178984.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: aac:Aaci_2618 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_004178985.1	KEGG: sli:Slin_1397 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178986.1	InterPro IPR004360; KEGG: cja:CJA_0178 glyoxylase family protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxylase family protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004178987.1	COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: rsl:RPSI07_2195 50S ribosomal protein L31, type B subfamily; PFAM: ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_004178988.1	InterPro IPR019794; KEGG: mmr:Mmar10_1967 flagellin modification protein FlmD; SPTR: Flagellin modification protein FlmD
YP_004178989.1	KEGG: sli:Slin_3037 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family
YP_004178990.1	InterPro IPR007167; KEGG: tit:Thit_1666 FeoA family protein; PFAM: FeoA family protein; SPTR: FeoA family protein; PFAM: FeoA domain
YP_004178991.1	COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: det:DET0097 iron dependent repressor, putative; PFAM: FeoA family protein; SPTR: Iron dependent repressor, putative; PFAM: FeoA domain
YP_004178992.1	KEGG: gbr:Gbro_0510 colicin V production protein; SPTR: Colicin V production protein
YP_004178993.1	COGs: COG0370 Fe2+ transport system protein B; InterProIPR002917: IPR011619: IPR011642: IPR011640: IPR 006073: IPR005225: IPR003373; KEGG: psl:Psta_2393 ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; SPTR: Ferrous iron transport protein b; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain
YP_004178994.1	KEGG: cme:CMB008C similar to vacuolar sorting protein DID4; SPTR: NimA-related protein kinase 8
YP_004178995.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR017909; KEGG: psl:Psta_2217 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Probable IolI protein; PFAM: Xylose isomerase-like TIM barrel
YP_004178996.1	COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: psl:Psta_1348 3-methyl-2-oxobutanoatehydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_004178997.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094: IPR004113: IPR016166; KEGG: psl:Psta_2649 FAD linked oxidase domain protein; PFAM: FAD linked oxidase domain protein; SPTR: Glycolate oxidase subunit; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_004178998.1	KEGG: psl:Psta_3802 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004178999.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: rba:RB279 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_004179000.1	KEGG: psl:Psta_4021 ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter
YP_004179001.1	InterPro IPR013525; KEGG: plm:Plim_3249 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein
YP_004179002.1	InterPro IPR001440: IPR019734: IPR013026; KEGG: rpt:Rpal_2530 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat
YP_004179003.1	COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002305: IPR002306: IPR001412; KEGG: plm:Plim_0771 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_004179004.1	KEGG: dfe:Dfer_2054 signal peptide; SPTR: Membrane-bound dehydrogenase domain protein; PFAM: Trehalose utilisation
YP_004179005.1	COGs: COG2091 Phosphopantetheinyl transferase; InterPro IPR008278; KEGG: ava:Ava_2597 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase superfamily
YP_004179006.1	InterPro IPR003716; KEGG: plm:Plim_2053 DNA-directed RNA polymerase, omega subunit; SPTR: DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6
YP_004179007.1	COGs: COG0194 Guanylate kinase; InterProIPR008144: IPR008145: IPR017665: IPR022272: IPR 020590; KEGG: rxy:Rxyl_1473 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_004179009.1	COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527: IPR013551: IPR005229; KEGG: rba:RB7091 hypothetical protein; PFAM: domain of unknown function DUF1732; YicC-like domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255
YP_004179010.1	InterPro IPR004692; KEGG: psl:Psta_3127 preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; SPTR: Putative uncharacterized protein; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_004179011.1	COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652: IPR020861; KEGG: ote:Oter_3825 triose-phosphate isomerase; PFAM: triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_004179012.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR001440: IPR020635: IPR002290: IPR 019734: IPR002151: IPR017441: IPR008271: IPR000719: IPR013026; KEGG: aba:Acid345_2310 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Putative serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004179013.1	COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: rbi:RB2501_14084 probable aminopeptidase; PFAM: peptidase M28; SPTR: Peptidase M28; PFAM: Peptidase family M28
YP_004179014.1	COGs: COG0118 Glutamine amidotransferase; InterPro IPR000991: IPR016226: IPR010139: IPR017926; KEGG: plm:Plim_2081 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; SPTR: Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_004179015.1	COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR006062: IPR006063; KEGG: msl:Msil_2551 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_004179016.1	COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795: IPR004161: IPR005517: IPR000640: IPR 005225: IPR018116; KEGG: sth:STH3140 protein translation elongation factor G; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: Protein translation elongation factor G; TIGRFAM: small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_004179017.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR006311: IPR017909; KEGG: rsl:RPSI07_2135 putative oxidoreductase; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004179018.1	KEGG: pkn:PKH_127070 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179020.1	KEGG: bta:521058 collagen, type XXII, alpha 1; SPTR: Putative uncharacterized protein Sb02g041242
YP_004179021.1	COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR000422: IPR000926: IPR016299; KEGG: psl:Psta_2110 GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; SPTR: Riboflavin biosynthesis protein RibA; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_004179022.1	InterPro IPR006342; KEGG: mar:MAE_13110 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family
YP_004179023.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659; KEGG: kko:Kkor_1452 peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: WD40-like beta Propeller containing protein; PRIAM: Acylaminoacyl-peptidase; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family
YP_004179024.1	KEGG: cse:Cseg_2143 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179025.1	COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR007197: IPR005244: IPR020050; KEGG: plm:Plim_0097 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Putative uncharacterized protein; PFAM: Radical SAM superfamily; TIGRFAM: putative menaquinone biosynthesis protein, SCO4494 family; radical SAM domain protein, CofH subfamily
YP_004179026.1	COGs: COG1437 Adenylate cyclase class 2 (thermophilic); InterPro IPR008172: IPR008173; KEGG: rba:RB6328 adenylyl cyclase related protein; PFAM: adenylate cyclase; SPTR: Adenylyl cyclase related protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB, putative
YP_004179027.1	COGs: COG3330 conserved hypothetical protein; KEGG: psl:Psta_4403 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179028.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042: IPR007627: IPR007624: IPR007630: IPR 000943: IPR014284: IPR005479; KEGG: psl:Psta_2413 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179029.1	KEGG: rmr:Rmar_0460 VanZ family protein; SPTR: VanZ family protein
YP_004179030.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: afw:Anae109_1425 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1
YP_004179031.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR020635: IPR002290: IPR017441: IPR 000719; KEGG: plm:Plim_3400 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain
YP_004179032.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0890 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A-glycosyltransferase, glycosyltransferase family 4 protein; PFAM: Glycosyl transferases group 1
YP_004179033.1	KEGG: chu:CHU_0867 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179034.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sfu:Sfum_3338 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1
YP_004179035.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296: IPR001173; KEGG: ote:Oter_3266 glycosyl transferase family protein; PFAM: glycosyl transferase group 1; glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2
YP_004179036.1	InterPro IPR010496; KEGG: sus:Acid_0701 hypothetical protein; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080)
YP_004179037.1	KEGG: nhl:Nhal_0677 methane monooxygenase/ammonia monooxygenase, subunit B; SPTR: Methane monooxygenase/ammonia monooxygenase, subunit B
YP_004179038.1	COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439: IPR003593: IPR017871; KEGG: fre:Franean1_5458 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004179039.1	KEGG: tgu:100190202 WW domain binding protein 2-like; SPTR: GA12129
YP_004179040.1	InterPro IPR006311: IPR017909; KEGG: psl:Psta_0688 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179041.1	InterPro IPR003088: IPR013428: IPR013427: IPR009056; KEGG: plm:Plim_0902 heme-binding protein; PFAM: cytochrome c class I; SPTR: Heme-binding protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004179042.1	InterPro IPR004843; KEGG: sli:Slin_6603 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase
YP_004179043.1	COGs: COG3375 conserved hypothetical protein; KEGG: tpe:Tpen_1785 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179044.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650: IPR017150: IPR001261; KEGG: cag:Cagg_3807 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Peptidase M20; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_004179045.1	COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782: IPR007352: IPR017936; KEGG: plm:Plim_0216 protein of unknown function DUF420; PFAM: protein of unknown function DUF420; electron transport protein SCO1/SenC; SPTR: Putative uncharacterized protein; PFAM: SCO1/SenC; Protein of unknown function (DUF420)
YP_004179046.1	KEGG: tml:GSTUM_00009071001 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179047.1	InterPro IPR000792: IPR014284; KEGG: sli:Slin_5409 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Two component transcriptional regulator, LuxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179048.1	SPTR: Putative uncharacterized protein
YP_004179049.1	KEGG: plm:Plim_3404 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Natural resistance-associated macrophage protein
YP_004179050.1	KEGG: slt:Slit_2521 S23 ribosomal protein; SPTR: S23 ribosomal protein; manually curated; PFAM: S23 ribosomal protein
YP_004179051.1	COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR020046: IPR020047: IPR001098: IPR002421: IPR 008918: IPR002298: IPR018320: IPR019760; KEGG: plm:Plim_3011 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I
YP_004179052.1	KEGG: psl:Psta_3786 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179053.1	COGs: COG0372 Citrate synthase; InterPro IPR002020: IPR011278: IPR019810; KEGG: psl:Psta_3158 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II
YP_004179054.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347: IPR020904; KEGG: psl:Psta_2335 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004179055.1	COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: bam:Bamb_0934 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: Putative lysophospholipase
YP_004179056.1	COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: psl:Psta_2332 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004179057.1	COGs: COG0322 Nuclease subunit of the excinuclease complex; InterPro IPR000305: IPR001943: IPR001162; KEGG: rba:RB7010 excinuclease ABC subunit C; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: Excinuclease ABC subunit C; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit
YP_004179058.1	KEGG: amr:AM1_0371 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179059.1	COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: lic:LIC11875 putative hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: Putative hydrolase; PFAM: ab-hydrolase associated lipase region; alpha/beta hydrolase fold
YP_004179060.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000253: IPR000160; KEGG: scl:sce8626 FHA domain-containing protein; PFAM: GGDEF domain containing protein; Forkhead-associated protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: FHA domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004179061.1	COGs: COG2077 Peroxiredoxin; InterPro IPR013740: IPR017936; KEGG: glo:Glov_2959 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin
YP_004179062.1	KEGG: dvu:DVU2153 tail fiber protein, putative; SPTR: Tail fiber protein, putative
YP_004179063.1	COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR002218: IPR013027: IPR004416: IPR020595; KEGG: plm:Plim_2536 glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; TIGRFAM: glucose inhibited division protein A; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A
YP_004179064.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR010093; KEGG: plm:Plim_2544 DNA binding domain protein, excisionase family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Probable regulatory components of sensory transduction system; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Response regulator receiver domain; TIGRFAM: DNA binding domain, excisionase family
YP_004179065.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR004358: IPR005467; KEGG: psl:Psta_1094 histidine kinase; PFAM: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004179066.1	COGs: COG1668 ABC-type Na+ efflux pump permease component; InterPro IPR003675; KEGG: psl:Psta_2528 abortive infection protein; PFAM: Abortive infection protein; SPTR: Probable sodium extrusion protein NatB; PFAM: CAAX amino terminal protease family
YP_004179067.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: rba:RB7633 sodium ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter (ATP-binding protein)-putative sodium extrusion ABC transporter; PFAM: ABC transporter
YP_004179068.1	KEGG: sma:SAV_5137 dehydrogenase; SPTR: Putative dehydrogenase
YP_004179069.1	COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; InterPro IPR001962: IPR005232; KEGG: psl:Psta_4402 ExsB family protein; PFAM: asparagine synthase; SPTR: ExsB family protein; manually curated; PFAM: Asparagine synthase; TIGRFAM: conserved hypothetical protein TIGR00268
YP_004179070.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149: IPR014189; KEGG: mxa:MXAN_4429 PIG3 family NAD(P)H quinone oxidoreductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: NAD(P)H quinone oxidoreductase, PIG3 family; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family
YP_004179071.1	KEGG: afw:Anae109_2789 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179072.1	InterPro IPR004861: IPR016130: IPR000387; KEGG: gme:Gmet_0085 protein tyrosine/serine phosphatase; PFAM: tyrosine phosphatase; SPTR: Protein tyrosine/serine phosphatase; PFAM: Tyrosine phosphatase family
YP_004179073.1	InterPro IPR011444: IPR009056; KEGG: rba:RB13137 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553)
YP_004179074.1	InterPro IPR010869: IPR006311: IPR006186; KEGG: psl:Psta_3350 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004179075.1	COGs: COG0349 Ribonuclease D; InterPro IPR002562: IPR002121: IPR006292; KEGG: plm:Plim_0672 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; PRIAM: Ribonuclease D; SMART: 3'-5' exonuclease; HRDC domain protein; SPTR: Ribonuclease D; TIGRFAM: ribonuclease D; PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D
YP_004179076.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR005532: IPR020635: IPR002290: IPR 017441: IPR008271: IPR000719; KEGG: plm:Plim_1535 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme
YP_004179077.1	KEGG: afw:Anae109_0871 TonB family protein; SPTR: Kexin-like serine endoprotease
YP_004179078.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550: IPR000644: IPR005170; KEGG: msv:Mesil_2233 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_004179079.1	COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797: IPR009056; KEGG: gau:GAU_0696 putative menaquinol-cytochrome c reductase cytochrome b/c subunit; PFAM: Cytochrome b/b6 domain; SPTR: Putative menaquinol-cytochrome c reductase cytochrome b/c subunit; PFAM: Cytochrome c; Cytochrome b(C-terminal)/b6/petD
YP_004179080.1	InterPro IPR017941; KEGG: plm:Plim_0423 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Menaquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain
YP_004179081.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: plm:Plim_4219 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Forkhead-associated protein; PFAM: FHA domain
YP_004179082.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: plm:Plim_4219 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: FHA domain containing protein; PFAM: FHA domain
YP_004179084.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: neu:NE1170 putative dihydroflavonol-4-reductase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: hopanoid-associated sugar epimerase
YP_004179085.1	KEGG: plm:Plim_0336 hypothetical protein; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase protein
YP_004179086.1	KEGG: rba:RB10292 signal peptide; SPTR: Putative uncharacterized protein
YP_004179087.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001940; KEGG: psl:Psta_3797 peptidase S1 and S6 chymotrypsin/Hap; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_004179088.1	COGs: COG0013 Alanyl-tRNA synthetase; InterProIPR018164: IPR012947: IPR003156: IPR002318: IPR 018165; KEGG: plm:Plim_2551 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; SPTR: Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase
YP_004179089.1	COGs: COG2127 conserved hypothetical protein; InterPro IPR003769; KEGG: rxy:Rxyl_2055 ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS; SPTR: ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS
YP_004179090.1	KEGG: mcc:705891 Rho guanine nucleotide exchange factor (GEF) 5; SPTR: Small Conductance Mechanosensitive ion Channel family protein
YP_004179091.1	COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR013216; KEGG: psl:Psta_1671 protein of unknown function Met10; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase
YP_004179092.1	COGs: COG0468 RecA/RadA recombinase; InterProIPR013765: IPR003593: IPR001553: IPR020584: IPR 020588: IPR020587; KEGG: plm:Plim_2553 RecA protein; PFAM: RecA domain protein; SMART: AAA ATPase; SPTR: Protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_004179093.1	KEGG: vpr:Vpar_1579 DNA repair ATPase-like protein; SPTR: ATPase involved in DNA repair-like protein
YP_004179094.1	KEGG: psl:Psta_3038 peptidase-like protein; SPTR: Peptidase-like protein
YP_004179095.1	COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR013200: IPR000150: IPR006379; KEGG: ttr:Tter_1448 Cof-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_004179096.1	InterPro IPR013517: IPR011519; KEGG: sus:Acid_0215 ASPIC/UnbV domain-containing protein; PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; SPTR: ASPIC/UnbV domain protein; PFAM: ASPIC and UnbV; FG-GAP repeat
YP_004179097.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR000192: IPR010970; KEGG: ace:Acel_1138 SufS subfamily cysteine desulfurase; PFAM: aminotransferase class V; SPTR: Cysteine desulfurases, SufS subfamily; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily
YP_004179098.1	COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871; KEGG: plm:Plim_1321 nitrogen-fixing NifU domain protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Nitrogen-fixing NifU domain protein; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family
YP_004179099.1	InterPro IPR003961: IPR011658: IPR018247; KEGG: lhk:LHK_00825 cellulose-binding domain protein; PFAM: Fibronectin type III domain protein; SMART: PA14 domain protein; Fibronectin type III domain protein; SPTR: Putative uncharacterized protein; PFAM: PA14 domain; Fibronectin type III domain
YP_004179100.1	COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751: IPR013747: IPR004655; KEGG: plm:Plim_2221 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_004179101.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR013655: IPR013767: IPR003661: IPR003594: IPR 001789: IPR008207: IPR000014: IPR004358: IPR000896: IPR005467; KEGG: rba:RB159 sensory transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: Sensory transduction histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box
YP_004179102.1	InterPro IPR011467; KEGG: rba:RB12489 signal peptide; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573)
YP_004179103.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tkm:TK90_2517 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004179104.1	InterPro IPR002035; KEGG: srm:SRM_02789 von Willebrand factor type A domain protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A domain protein; PFAM: von Willebrand factor type A domain
YP_004179105.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: psl:Psta_4009 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: Probable transcription regulator FurR family protein; PFAM: Ferric uptake regulator family
YP_004179106.1	COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V); InterPro IPR007581; KEGG: dau:Daud_2187 deoxyribonuclease V; PFAM: Endonuclease V; PRIAM: Deoxyribonuclease V; SPTR: Deoxyribonuclease V; PFAM: Endonuclease V
YP_004179107.1	InterPro IPR005181; KEGG: rba:RB10048 sialic acid-specific 9-O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase; PRIAM: Sialate O-acetylesterase; SPTR: Sialic acid-specific 9-O-acetylesterase; PFAM: Domain of unknown function (DUF303)
YP_004179108.1	KEGG: dev:DhcVS_293 phage domain protein; SPTR: Phage domain protein
YP_004179109.1	KEGG: cyb:CYB_2329 OmpA family protein; SPTR: Putative DNA-binding protein
YP_004179110.1	KEGG: sus:Acid_4111 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: P22 coat protein - gene protein 5
YP_004179111.1	KEGG: pno:SNOG_05675 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179112.1	KEGG: htu:Htur_1455 pyrrolo-quinoline quinone; SPTR: Pyrrolo-quinoline quinone
YP_004179113.1	KEGG: plm:Plim_4245 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179114.1	KEGG: plm:Plim_2121 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179115.1	KEGG: mdo:100024436 hypothetical protein LOC100024436; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily
YP_004179116.1	KEGG: aav:Aave_2261 hypothetical protein; SPTR: Beta-galactosidase family protein
YP_004179117.1	KEGG: bfo:BRAFLDRAFT_281325 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179118.1	KEGG: fal:FRAAL6684 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179119.1	KEGG: sro:Sros_5147 phosphoenolpyruvate synthase; SPTR: Phosphoenolpyruvate synthase
YP_004179120.1	KEGG: blo:BL1281 ribonuclease G; SPTR: Ribonuclease G
YP_004179121.1	KEGG: rsq:Rsph17025_0363 hypothetical protein; SPTR: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase-like protein
YP_004179122.1	InterPro IPR000866: IPR017936; KEGG: rpf:Rpic12D_3102 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
YP_004179123.1	COGs: COG0297 Glycogen synthase; InterPro IPR013534: IPR001296: IPR011835; KEGG: psl:Psta_3210 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; SPTR: Glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type
YP_004179124.1	KEGG: ppp:PHYPADRAFT_72648 hypothetical protein; SPTR: Predicted protein
YP_004179125.1	InterProIPR003088: IPR004155: IPR013428: IPR013427: IPR 009056; KEGG: psl:Psta_0923 membrane-bound dehydrogenase domain protein; PFAM: cytochrome c class I; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004179126.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: ote:Oter_1985 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179127.1	KEGG: act:ACLA_088300 WW domain protein; SPTR: WW domain protein
YP_004179128.1	COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR001307; KEGG: pfl:PFL_0553 fused rhodanese domain-containing protein/phosphatidylserine decarboxylase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein/phosphatidylserine decarboxylase; manually curated; PFAM: Rhodanese-like domain
YP_004179129.1	COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: mgm:Mmc1_3093 carbon storage regulator, CsrA / carbon storage regulator, CsrA; PFAM: carbon storage regulator; SPTR: Carbon storage regulator homolog; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_004179130.1	COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136: IPR014179; KEGG: plm:Plim_0463 PfaD family protein; PFAM: 2-nitropropane dioxygenase NPD; SPTR: PfaD family protein; TIGRFAM: PfaD family protein; PFAM: 2-nitropropane dioxygenase; TIGRFAM: PfaD family protein
YP_004179131.1	COGs: COG3321 Polyketide synthase modules and related protein; InterPro IPR014030: IPR018201; KEGG: gur:Gura_2012 erythronolide synthase; PFAM: Beta-ketoacyl synthase; SPTR: Erythronolide synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain
YP_004179132.1	COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR014031: IPR014043: IPR006163: IPR013968: IPR 009081; KEGG: glo:Glov_2267 polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: KR domain protein; Beta-ketoacyl synthase; Acyl transferase; phosphopantetheine-binding; SPTR: Polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: acyl carrier protein
YP_004179133.1	COGs: COG3321 Polyketide synthase modules and related protein; InterPro IPR014030: IPR014031: IPR013114; KEGG: glo:Glov_2268 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Beta-ketoacyl synthase; PFAM: FabA-like domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: PfaB family protein
YP_004179134.1	COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013747; KEGG: plm:Plim_3323 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; SPTR: 3-Oxoacyl-(Acyl-carrier-protein (ACP)) synthase III domain protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; Thiolase, N-terminal domain
YP_004179135.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073: IPR000639; KEGG: glo:Glov_2270 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold
YP_004179136.1	COGs: COG3379 conserved hypothetical protein; InterPro IPR002591; KEGG: hor:Hore_17270 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_004179137.1	COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: rms:RMA_0089 sugar phosphate permease; PFAM: major facilitator superfamily MFS_1; SPTR: Glycerol-3-phosphate transporter; PFAM: Major Facilitator Superfamily
YP_004179138.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB4638 arylsulphatase A; PFAM: sulfatase; SPTR: Arylsulphatase A; PFAM: Sulfatase
YP_004179139.1	KEGG: phu:Phum_PHUM263440 spliceosome associated protein, putative; SPTR: Putative uncharacterized protein
YP_004179140.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212: IPR014016: IPR014017; KEGG: ank:AnaeK_2052 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase
YP_004179141.1	KEGG: rba:RB12718 putative tRNA adenylyltransferase; SPTR: Putative uncharacterized protein; PFAM: HD domain
YP_004179142.1	COGs: COG3386 Gluconolactonase; InterPro IPR000801: IPR013658: IPR005511; KEGG: plm:Plim_2162 SMP-30/gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; esterase; SPTR: SMP-30/Gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; Putative esterase
YP_004179143.1	InterPro IPR007341; KEGG: cli:Clim_0730 transglycosylase-associated protein; PFAM: Transglycosylase-associated protein; SPTR: Transglycosylase-associated protein; PFAM: Transglycosylase associated protein
YP_004179144.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR020635: IPR002290: IPR017441: IPR 008271: IPR000719; KEGG: gob:Gobs_1752 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase with PASTA sensor(S); PFAM: Protein kinase domain
YP_004179145.1	COGs: COG0819 Putative transcription activator; InterPro IPR004305; KEGG: mjl:Mjls_0346 TenA family transcription regulator; PFAM: TENA/THI-4 domain-containing protein; PRIAM: Thiaminase; SPTR: Transcriptional activator, TenA family; PFAM: TENA/THI-4/PQQC family
YP_004179146.1	InterPro IPR002035; KEGG: psl:Psta_0969 hypothetical protein; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: Predicted metallopeptidase (DUF2201)
YP_004179147.1	KEGG: cpc:Cpar_0963 hypothetical protein; SPTR: Conserved hypothetical membrane protein
YP_004179148.1	InterPro IPR004360; KEGG: cvi:CV_2020 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004179150.1	COGs: COG3211 phosphatase; InterPro IPR008557: IPR006311: IPR017909; KEGG: hau:Haur_4431 hypothetical protein; PFAM: protein of unknown function DUF839; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF839)
YP_004179151.1	KEGG: rpt:Rpal_3870 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179152.1	COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: msl:Msil_0420 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; PFAM: Delta-aminolevulinic acid dehydratase
YP_004179153.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1029 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase; PFAM: Glycosyl transferases group 1
YP_004179154.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661: IPR003594: IPR001789: IPR004358: IPR 005467; KEGG: rba:RB8873 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: Sensory transduction histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004179155.1	InterPro IPR000866: IPR017936; KEGG: fjo:Fjoh_2938 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: Redoxin
YP_004179156.1	COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR013749: IPR004399; KEGG: cja:CJA_2910 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; PRIAM: Phosphomethylpyrimidine kinase; SPTR: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_004179157.1	InterPro IPR001943; KEGG: psl:Psta_3649 hypothetical protein; PFAM: UvrB/UvrC protein; SPTR: Putative uncharacterized protein; PFAM: UvrB/uvrC motif
YP_004179158.1	InterPro IPR008538; KEGG: rrs:RoseRS_2740 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820)
YP_004179159.1	KEGG: osa:4341597 hypothetical protein; SPTR: Os06g0634600 protein
YP_004179160.1	KEGG: aca:ACP_1356 BNR/Asp-box repeat protein; SPTR: BNR/Asp-box repeat protein; PFAM: BNR/Asp-box repeat
YP_004179161.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347; KEGG: psl:Psta_2635 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004179162.1	KEGG: ppp:PHYPADRAFT_224311 hypothetical protein; SPTR: Predicted protein
YP_004179163.1	KEGG: cyh:Cyan8802_2208 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179164.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: psl:Psta_2904 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] domain
YP_004179165.1	InterPro IPR011444; KEGG: rba:RB544 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004179166.1	InterPro IPR010869: IPR006311: IPR017909; KEGG: rba:RB546 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004179167.1	KEGG: plm:Plim_2790 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179168.1	KEGG: kse:Ksed_00180 protein kinase family protein with PASTA domain; SPTR: Protein kinase family protein with PASTA domain
YP_004179169.1	COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006218: IPR006269; KEGG: psl:Psta_3993 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase
YP_004179170.1	COGs: COG1597 Sphingosine kinase; InterPro IPR001206; KEGG: psl:Psta_3992 diacylglycerol kinase catalytic region; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; SPTR: Putative uncharacterized protein; PFAM: Diacylglycerol kinase catalytic domain
YP_004179171.1	KEGG: tbi:Tbis_1120 RNA binding metal dependent phosphohydrolase; SPTR: RNA binding metal dependent phosphohydrolase
YP_004179172.1	InterPro IPR012902; KEGG: rba:RB6458 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179173.1	InterPro IPR013424; KEGG: rba:RB4575 signal peptide; SPTR: Putative uncharacterized protein
YP_004179174.1	KEGG: mac:MA4289 cell surface protein; SPTR: Cell surface protein
YP_004179175.1	KEGG: jde:Jden_1212 anthranilate synthase component I; SPTR: Anthranilate synthase component I
YP_004179176.1	InterPro IPR011521; KEGG: psl:Psta_1964 YTV domain protein; PFAM: YTV repeat-containing protein; SPTR: YTV domain protein; PFAM: YTV
YP_004179177.1	KEGG: osa:4328854 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179178.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000253: IPR017442: IPR020635: IPR002290: IPR 017441: IPR008271: IPR000719; KEGG: sro:Sros_3456 serine/threonine protein kinase-like protein; PFAM: Serine/threonine-protein kinase-like domain; Forkhead-associated protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Forkhead-associated protein; SPTR: Serine/threonine protein kinase-like protein; PFAM: Protein kinase domain; FHA domain
YP_004179179.1	COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589: IPR012810; KEGG: mxa:MXAN_3684 trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Trehalose synthase; TIGRFAM: trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase
YP_004179180.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623: IPR002939: IPR003095: IPR018253; KEGG: psl:Psta_4209 chaperone DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Chaperone DnaJ domain protein; PFAM: DnaJ C terminal region; DnaJ domain
YP_004179181.1	KEGG: gla:GL50803_113836 High cysteine membrane protein EGF-like; SPTR: High cysteine membrane protein EGF-like
YP_004179182.1	COGs: COG0594 RNase P protein component; InterPro IPR000100; KEGG: psl:Psta_4212 ribonuclease P protein component; PFAM: ribonuclease P protein; SPTR: Ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial
YP_004179183.1	COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: aeh:Mlg_1511 hypothetical protein; PFAM: protein of unknown function DUF37; SPTR: UPF0161 protein Mlg_1511; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD
YP_004179184.1	KEGG: scb:SCAB_10901 putative membrane-bound oxidoreductase; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004179185.1	KEGG: plm:Plim_2899 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179186.1	KEGG: rba:RB7689 signal peptide; SPTR: Putative uncharacterized protein
YP_004179187.1	InterPro IPR012902; KEGG: plm:Plim_2901 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179188.1	COGs: COG1164 Oligoendopeptidase F; InterPro IPR001567: IPR011976; KEGG: min:Minf_1983 oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; SPTR: Oligoendopeptidase, M3 family; TIGRFAM: oligoendopeptidase, M3 family; PFAM: Peptidase family M3; TIGRFAM: oligoendopeptidase, M3 family
YP_004179189.1	COGs: COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetase; InterPro IPR013120: IPR010080; KEGG: mxa:MXAN_4525 non-ribosomal peptide synthase MxaA; PFAM: Male sterility domain; SPTR: MxaA; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility protein; TIGRFAM: thioester reductase domain
YP_004179190.1	COGs: COG0012 GTPase probable translation factor; InterPro IPR013029: IPR004396: IPR006073; KEGG: mta:Moth_2477 GTP-dependent nucleic acid-binding protein EngD; PFAM: protein of unknown function DUF933; SPTR: Putative uncharacterized protein; TIGRFAM: GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_004179191.1	COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583: IPR000836: IPR005854: IPR017932; KEGG: rba:RB5050 amidophosphoribosyltransferase [precursor]; PFAM: phosphoribosyltransferase; glutamine amidotransferase class-II; SPTR: Amidophosphoribosyltransferase [precursor]; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_004179192.1	COGs: COG0263 Glutamate 5-kinase; InterProIPR001048: IPR002478: IPR011529: IPR001057: IPR 005715: IPR019797; KEGG: plm:Plim_1538 glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein; SPTR: Glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase
YP_004179193.1	InterPro IPR003825; KEGG: det:DET0192 CvpA family protein; PFAM: Colicin V production protein; SPTR: CvpA family protein; PFAM: Colicin V production protein
YP_004179194.1	KEGG: oan:Oant_2034 phosphatidate cytidylyltransferase; SPTR: Putative uncharacterized protein
YP_004179195.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: srm:SRM_01110 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_004179196.1	COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994: IPR001714: IPR002467; KEGG: dsa:Desal_2239 methionine aminopeptidase, type I; PFAM: peptidase M24; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_004179197.1	COGs: COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218: IPR006219; KEGG: plm:Plim_0134 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_004179198.1	COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR001307; KEGG: rxy:Rxyl_2802 thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Thiosulfate sulfurtransferase; PFAM: Rhodanese-like domain
YP_004179199.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149; KEGG: plm:Plim_0729 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: Alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004179200.1	COGs: COG0863 DNA modification methylase; InterPro IPR002941: IPR001091: IPR002052; KEGG: chl:Chy400_0713 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase; PFAM: DNA methylase
YP_004179201.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: plm:Plim_4088 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004179202.1	InterPro IPR012902; KEGG: psl:Psta_3084 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179203.1	COGs: COG2232 ATP-dependent carboligase related to biotin carboxylase; InterPro IPR003806: IPR011761; KEGG: met:M446_5779 hypothetical protein; PFAM: protein of unknown function DUF201; SPTR: Putative uncharacterized protein; PFAM: ATP-grasp domain
YP_004179204.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: aba:Acid345_2211 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2
YP_004179205.1	KEGG: fra:Francci3_3136 serine/threonine protein kinase; SPTR: Serine/threonine protein kinase
YP_004179206.1	COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: plm:Plim_2400 protein of unknown function DUF111; PFAM: protein of unknown function DUF111; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF111; TIGRFAM: conserved hypothetical protein TIGR00299
YP_004179207.1	COGs: COG0051 Ribosomal protein S10; InterPro IPR001848: IPR005731; KEGG: plm:Plim_0476 ribosomal protein S10; PFAM: ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_004179208.1	COGs: COG0087 Ribosomal protein L3; InterPro IPR000597: IPR019927: IPR019926; KEGG: rba:RB7833 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_004179209.1	COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: psl:Psta_2601 ribosomal protein L4/L1e; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family
YP_004179210.1	COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: plm:Plim_0479 ribosomal protein L25/L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; PFAM: Ribosomal protein L23
YP_004179211.1	COGs: COG0090 Ribosomal protein L2; InterPro IPR002171: IPR005880; KEGG: plm:Plim_0480 ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_004179212.1	COGs: COG0185 Ribosomal protein S19; InterPro IPR002222: IPR005732: IPR020934; KEGG: tye:THEYE_A1442 ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_004179213.1	COGs: COG0091 Ribosomal protein L22; InterPro IPR001063: IPR005727; KEGG: psl:Psta_2605 ribosomal protein L22; PFAM: ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_004179214.1	COGs: COG0092 Ribosomal protein S3; InterProIPR008282: IPR004044: IPR001351: IPR004087: IPR 005704: IPR018280; KEGG: psl:Psta_2606 ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; SPTR: 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_004179215.1	COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR016180: IPR000114: IPR020798; KEGG: rba:RB7841 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_004179216.1	InterPro IPR001854; KEGG: psl:Psta_2608 ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: Probable 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_004179217.1	COGs: COG0186 Ribosomal protein S17; InterPro IPR000266: IPR019984: IPR019979; KEGG: plm:Plim_0486 ribosomal protein S17; PFAM: ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_004179218.1	COGs: COG0093 Ribosomal protein L14; InterPro IPR000218: IPR005745; KEGG: shi:Shel_23370 LSU ribosomal protein L14P; PFAM: ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_004179219.1	COGs: COG0198 Ribosomal protein L24; InterPro IPR005824: IPR003256: IPR005825; KEGG: rba:RB7851 50S ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; SPTR: 50S ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_004179220.1	COGs: COG0094 Ribosomal protein L5; InterPro IPR002132: IPR020929; KEGG: aba:Acid345_1238 50S ribosomal protein L5; SPTR: 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_004179221.1	COGs: COG0199 Ribosomal protein S14; InterPro IPR001209: IPR018271; KEGG: emi:Emin_1405 ribosomal protein S14; PFAM: ribosomal protein S14; SPTR: 30S ribosomal protein S14 type Z; manually curated; PFAM: Ribosomal protein S14p/S29e
YP_004179222.1	COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: psl:Psta_2614 ribosomal protein S8; PFAM: ribosomal protein S8; SPTR: 30S ribosomal protein S8; PFAM: Ribosomal protein S8
YP_004179223.1	COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040: IPR000702: IPR019906: IPR002358; KEGG: rba:RB7856 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_004179224.1	COGs: COG0256 Ribosomal protein L18; InterPro IPR005484: IPR004389; KEGG: sth:STH3059 50S ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; SPTR: 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_004179226.1	COGs: COG0098 Ribosomal protein S5; InterPro IPR013810: IPR005324: IPR005712: IPR018192; KEGG: rba:RB7859 30S ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; SPTR: 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_004179227.1	COGs: COG0200 Ribosomal protein L15; InterPro IPR005749: IPR001196; KEGG: trq:TRQ2_1375 50S ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_004179228.1	COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: plm:Plim_0496 preprotein translocase, SecY subunit; PFAM: SecY protein; SPTR: Preprotein translocase subunit secY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit
YP_004179229.1	InterPro IPR000473; KEGG: ele:Elen_2808 ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_004179230.1	COGs: COG0099 Ribosomal protein S13; InterPro IPR001892: IPR019980: IPR018269; KEGG: psl:Psta_2623 ribosomal protein S13; PFAM: ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13
YP_004179231.1	COGs: COG0100 Ribosomal protein S11; InterPro IPR001971: IPR019981: IPR018102; KEGG: plm:Plim_0498 ribosomal protein S11; PFAM: ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_004179232.1	COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR001912: IPR002942: IPR005709; KEGG: tpd:Teth39_0401 30S ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_004179233.1	COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterProIPR011261: IPR011262: IPR011260: IPR011263: IPR 011773; KEGG: plm:Plim_0499 DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_004179234.1	COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: mca:MCA2346 ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_004179235.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: tgo:TGME49_043580 HIT domain-containing protein; PFAM: histidine triad (HIT) protein; SPTR: Predicted protein; PFAM: HIT domain
YP_004179236.1	COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455: IPR000304; KEGG: acp:A2cp1_1474 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_004179237.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198: IPR002347; KEGG: ade:Adeh_3849 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004179238.1	COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: sti:Sthe_2745 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2
YP_004179239.1	COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR000257: IPR006361; KEGG: scl:sce8628 putative uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase
YP_004179240.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: hoh:Hoch_2233 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004179241.1	KEGG: sus:Acid_7688 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179242.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: hoh:Hoch_2235 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004179243.1	KEGG: sti:Sthe_1080 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179244.1	COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: cyb:CYB_0846 hypothetical protein; PFAM: formylmethanofuran dehydrogenase subunit E region; SPTR: Conserved domain protein; PFAM: FmdE, Molybdenum formylmethanofuran dehydrogenase operon
YP_004179245.1	KEGG: drt:Dret_1972 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179246.1	COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR002142: IPR004635; KEGG: rba:RB1371 proteinase IV homolog YteI; PFAM: peptidase S49; SPTR: Proteinase IV homolog yteI; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type
YP_004179247.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: rba:RB6502 putative permease; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease
YP_004179248.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR017871: IPR003439; KEGG: gau:GAU_2113 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter-related protein; PFAM: ABC transporter
YP_004179249.1	InterPro IPR014338; KEGG: reu:Reut_A0701 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; SPTR: Transcriptional regulator, MarR family; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996
YP_004179250.1	KEGG: bfo:BRAFLDRAFT_63381 hypothetical protein; SPTR: Gap in sequence
YP_004179251.1	KEGG: mar:MAE_47960 GP63-like protein; SPTR: GP63-like protein
YP_004179252.1	KEGG: tit:Thit_1395 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179253.1	COGs: COG3481 HD-superfamily hydrolase; InterPro IPR003607: IPR006674; KEGG: psl:Psta_4761 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Nucleic acid-binding protein, putative; PFAM: HD domain
YP_004179254.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_4084 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179255.1	COGs: COG0497 ATPase involved in DNA repair; InterPro IPR004604: IPR003395; KEGG: mta:Moth_1507 DNA repair protein RecN; PFAM: SMC domain protein; SPTR: DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_004179256.1	COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: tel:tlr1214 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrB; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase
YP_004179257.1	InterPro IPR013424; KEGG: oan:Oant_2810 outer membrane autotransporter; SPTR: Putative uncharacterized protein; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004179258.1	KEGG: plm:Plim_0945 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179259.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sus:Acid_6453 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein
YP_004179260.1	COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR016454: IPR000192; KEGG: rmr:Rmar_1215 aminotransferase class V; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase class V; PFAM: Aminotransferase class-V
YP_004179261.1	COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR019798: IPR022272: IPR001085; KEGG: tro:trd_0755 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_004179262.1	KEGG: cma:Cmaq_1622 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179263.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sit:TM1040_3346 xylose isomerase-like TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Myo-inositol catabolism protein; PFAM: Xylose isomerase-like TIM barrel
YP_004179264.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR008271: IPR 017442: IPR000719; KEGG: hoh:Hoch_1432 serine/threonine protein kinase with WD40 repeats; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase with WD40 repeats; PFAM: Protein kinase domain
YP_004179265.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR008271: IPR017442: IPR 000719: IPR013026; KEGG: psl:Psta_0270 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine-protein kinase; PFAM: Protein kinase domain
YP_004179266.1	InterPro IPR004993; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein; PFAM: GH3 auxin-responsive promoter; SPTR: Auxin-responsive GH3-related protein; PFAM: GH3 auxin-responsive promoter
YP_004179267.1	COGs: COG3963 Phospholipid N-methyltransferase; InterPro IPR020598: IPR020596: IPR001737; KEGG: bbe:BBR47_00590 hypothetical protein; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: Putative uncharacterized protein; PFAM: Ribosomal RNA adenine dimethylase
YP_004179268.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rmr:Rmar_0379 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold
YP_004179269.1	KEGG: tro:trd_1801 hypothetical protein; SPTR: Putative membrane protein
YP_004179270.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593: IPR017871: IPR003439; KEGG: psl:Psta_2421 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family
YP_004179271.1	KEGG: psl:Psta_4324 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; SPTR: Hypothetical membrane protein
YP_004179272.1	InterPro IPR002052; KEGG: aau:AAur_pTC10295 hypothetical protein; SPTR: N-6-adenine-methyltransferase; PFAM: DNA N-6-adenine-methyltransferase (Dam)
YP_004179273.1	COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: rba:RB10108 DNA polymerase III, beta chain; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_004179274.1	KEGG: dae:Dtox_2979 CRISPR-associated protein, Crm2 family; SPTR: CRISPR-associated protein, Crm2 family; PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein, Crm2 family
YP_004179275.1	COGs: COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR019117; KEGG: hha:Hhal_0628 CRISPR-associated Cmr3 family protein; PFAM: CRISPR-associated protein, Cmr3; SPTR: CRISPR-associated protein, Cmr3 family; PFAM: CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR-associated protein, Cmr3 family
YP_004179276.1	COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013410: IPR005537; KEGG: rce:RC1_3484 CRISPR-associated RAMP protein, putative; PFAM: protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, putative; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family
YP_004179277.1	InterPro IPR010160; KEGG: dae:Dtox_2976 CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein TM1791.1; SPTR: CRISPR-associated protein, Cmr5 family; TIGRFAM: CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein (Cas_Cmr5); TIGRFAM: CRISPR-associated protein, Cmr5 family
YP_004179278.1	COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR010172: IPR005537; KEGG: hor:Hore_15110 CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family
YP_004179279.1	InterPro IPR007522; KEGG: rxy:Rxyl_0264 CRISPR-associated RAMP Cmr1 family protein; SPTR: CRISPR-associated protein, Cmr1 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family
YP_004179280.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR018130: IPR013154: IPR013149; KEGG: gbe:GbCGDNIH1_0098 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004179281.1	KEGG: eca:ECA0170 hypothetical protein; SPTR: Putative exported peptidase
YP_004179282.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_3656 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179283.1	InterPro IPR011701; KEGG: bpy:Bphyt_0287 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004179284.1	KEGG: tva:TVAG_189160 chitinase; SPTR: Putative uncharacterized protein; manually curated
YP_004179285.1	KEGG: bpy:Bphyt_0986 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179286.1	COGs: COG1225 Peroxiredoxin; InterPro IPR000866: IPR019734: IPR017936; KEGG: plm:Plim_3941 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: TPR repeat protein; PFAM: AhpC/TSA family
YP_004179287.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR008271: IPR 017442: IPR005532: IPR000719; KEGG: psl:Psta_0057 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine-protein kinase pknB; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme
YP_004179288.1	InterPro IPR003997: IPR006143; KEGG: rba:RB10473 alkaline protease secretion protein AprE; PFAM: secretion protein HlyD family protein; SPTR: Similar to alkaline proteinase secretion protein aprE
YP_004179289.1	COGs: COG1566 Multidrug resistance efflux pump; KEGG: psl:Psta_0858 hypothetical protein; SPTR: Probable multidrug efflux pump; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004179290.1	InterPro IPR008915; KEGG: psl:Psta_0857 peptidase, M50 family; PFAM: peptidase M50; SPTR: Peptidase, M50 family; PFAM: Peptidase family M50
YP_004179291.1	KEGG: scb:SCAB_72391 putative ATPase; SPTR: Putative ATPase
YP_004179292.1	COGs: COG1432 conserved hypothetical protein; KEGG: bgl:bglu_2g12170 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88; TIGRFAM: conserved hypothetical protein TIGR00288
YP_004179293.1	InterPro IPR004843; KEGG: scl:sce5969 calcineurin-like phosphoesterase; PFAM: metallophosphoesterase; SPTR: Calcineurin-like phosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_004179294.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: psl:Psta_4481 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Putative peptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_004179295.1	COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249: IPR000089; KEGG: plm:Plim_0064 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_004179296.1	COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR005479: IPR004549: IPR005481: IPR005482: IPR 011761: IPR011764; KEGG: plm:Plim_0063 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: Acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit
YP_004179297.1	COGs: COG0692 Uracil DNA glycosylase; InterPro IPR018085: IPR002043: IPR005122; KEGG: cai:Caci_5297 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase
YP_004179298.1	KEGG: dma:DMR_46130 hypothetical membrane protein; SPTR: Hypothetical membrane protein
YP_004179299.1	COGs: COG0695 Glutaredoxin and related protein; InterPro IPR011767: IPR014025: IPR002109; KEGG: pde:Pden_2586 glutaredoxin 3; PFAM: glutaredoxin; SPTR: Glutaredoxin 3; PFAM: Glutaredoxin
YP_004179300.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR017900: IPR006655: IPR006478: IPR001041: IPR 006963: IPR006656: IPR006657: IPR017896; KEGG: mno:Mnod_5226 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; ferredoxin; molydopterin dinucleotide-binding region; SPTR: Formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; NAD-dependent formate dehydrogenase iron-sulfur protein
YP_004179301.1	COGs: COG1891 conserved hypothetical protein; InterPro IPR007565; KEGG: mex:Mext_1844 hypothetical protein; PFAM: protein of unknown function DUF556; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF556)
YP_004179302.1	InterPro IPR010496; KEGG: psl:Psta_3759 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative large multi-functional protein; PFAM: Domain of Unknown Function (DUF1080)
YP_004179303.1	COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: syf:Synpcc7942_1562 ADP-ribosylglycohydrolase-like; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Probable ADP-ribosylglycohydrolase; PFAM: ADP-ribosylglycohydrolase
YP_004179305.1	KEGG: lma:LmjF06.1150 hypothetical protein
YP_004179306.1	KEGG: plm:Plim_2074 hypothetical protein; SPTR: Probable xanthan lyase
YP_004179307.1	COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR000169: IPR008257; KEGG: psl:Psta_1911 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase; PRIAM: Membrane dipeptidase; SPTR: Membrane dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19)
YP_004179308.1	KEGG: dal:Dalk_2449 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179309.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR008271: IPR017442: IPR 005532: IPR000719; KEGG: rba:RB1892 serine/threonine protein kinase; PFAM: protein of unknown function DUF323; Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme
YP_004179310.1	COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: cag:Cagg_1301 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Hydroxypyruvate isomerase; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel
YP_004179311.1	InterPro IPR002035; KEGG: psl:Psta_3764 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain
YP_004179312.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311: IPR012307: IPR017909; KEGG: psl:Psta_2977 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004179313.1	InterPro IPR005543; KEGG: mta:Moth_0837 stage V sporulation protein D; PFAM: PASTA domain containing protein; SPTR: PASTA domain containing protein; PFAM: PASTA domain
YP_004179314.1	COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: cwo:Cwoe_0017 serine/threonine protein kinase with PASTA sensor(s); PFAM: PASTA domain containing protein; SPTR: Serine/threonine protein kinase with PASTA sensor(S); PFAM: PASTA domain
YP_004179315.1	COGs: COG1225 Peroxiredoxin; InterPro IPR017937: IPR000866: IPR017936; KEGG: ote:Oter_2095 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004179316.1	InterPro IPR017937: IPR000866: IPR017936; KEGG: ote:Oter_2095 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004179317.1	KEGG: tro:trd_0839 O-antigen polymerase family; SPTR: O-Antigen Polymerase family
YP_004179318.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR000560: IPR012307; KEGG: gym:GYMC10_3280 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel
YP_004179319.1	COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR001412: IPR020060: IPR020058; KEGG: afw:Anae109_0319 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: Glutamyl-Q tRNA(Asp) synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase
YP_004179320.1	COGs: COG1186 Protein chain release factor B; InterPro IPR004374: IPR005139: IPR000352; KEGG: amu:Amuc_0245 peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: Peptide chain release factor 2; TIGRFAM: peptide chain release factor 2; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2
YP_004179321.1	COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: psl:Psta_2022 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Hydrolase, carbon-nitrogen family protein; PFAM: Carbon-nitrogen hydrolase
YP_004179322.1	InterPro IPR001917: IPR001330; KEGG: plm:Plim_4048 cycloartenol synthase-like protein; PFAM: Prenyltransferase/squalene oxidase; SPTR: Putative uncharacterized protein
YP_004179323.1	KEGG: mtp:Mthe_1075 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179324.1	InterPro IPR013216; KEGG: rca:Rcas_0141 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004179325.1	COGs: COG3379 conserved hypothetical protein; InterPro IPR005829: IPR002591; KEGG: htu:Htur_5256 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_004179326.1	InterPro IPR005829: IPR003663; KEGG: nml:Namu_4863 sugar transporter; SPTR: Sugar transporter; TIGRFAM: sugar transporter; PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family
YP_004179327.1	KEGG: pan:PODANSg965 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PGAP1-like protein
YP_004179328.1	KEGG: rba:RB6430 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179329.1	InterPro IPR006162; KEGG: kpe:KPK_A0192 hypothetical protein; SPTR: Membrane protein
YP_004179330.1	KEGG: cnb:CNBH3510 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179331.1	KEGG: cci:CC1G_14467 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179332.1	KEGG: ure:UREG_05390 hypothetical protein
YP_004179333.1	KEGG: hdu:HD0089 transcription regulator; SPTR: Probable transcription regulator
YP_004179334.1	COGs: COG0207 Thymidylate synthase; InterPro IPR020940: IPR000398; KEGG: msv:Mesil_0097 thymidylate synthase; PFAM: thymidylate synthase; PRIAM: Thymidylate synthase; SPTR: Thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase
YP_004179335.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179336.1	KEGG: sco:SCO5580 docking protein; SPTR: Putative prokaryotic docking protein
YP_004179337.1	KEGG: psl:Psta_0705 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179338.1	KEGG: ana:all4578 hypothetical protein; SPTR: All4578 protein
YP_004179339.1	KEGG: aau:AAur_3400 putative lipoprotein; SPTR: Predicted protein
YP_004179340.1	COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: psl:Psta_0198 transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_004179341.1	COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583: IPR006982: IPR002932: IPR002489: IPR 017932; KEGG: ttr:Tter_0474 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin); PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II
YP_004179342.1	COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR006005: IPR000759: IPR013027; KEGG: tcu:Tcur_2865 glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Glutamate synthase, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit
YP_004179343.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR017442: IPR 000719; KEGG: rba:RB2673 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004179344.1	KEGG: ana:all7320 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Predicted periplasmic protein (DUF2233)
YP_004179345.1	InterPro IPR004096; KEGG: cyp:PCC8801_1056 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR; PFAM: V4R domain
YP_004179346.1	InterPro IPR012128; KEGG: cyb:CYB_0575 phycobilisome protein; PFAM: Phycocyanin; SPTR: Phycobilisome protein; PFAM: Phycobilisome protein
YP_004179347.1	KEGG: ade:Adeh_0691 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179348.1	COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: tel:tll0856 hypothetical protein; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR; PFAM: V4R domain
YP_004179349.1	COGs: COG0633 Ferredoxin; InterPro IPR001055: IPR001041; KEGG: cyt:cce_2108 ferredoxin; PFAM: ferredoxin; SPTR: Probable ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_004179350.1	InterPro IPR016053; KEGG: tps:THAPSDRAFT_17865 hypothetical protein; PFAM: Haem oxygenase-like; SPTR: Predicted protein; PFAM: Heme oxygenase
YP_004179351.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR017442: IPR 000719; KEGG: ttr:Tter_1004 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004179352.1	COGs: COG0515 Serine/threonine protein kinase; InterPro IPR002290: IPR020635: IPR017442: IPR000719; KEGG: hoh:Hoch_5516 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine kinase PKN9; PFAM: Protein kinase domain
YP_004179353.1	COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: rxy:Rxyl_2476 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004179354.1	COGs: COG5002 Signal transduction histidine kinase; InterProIPR000014: IPR003661: IPR003594: IPR004358: IPR 013767: IPR005467; KEGG: plm:Plim_1491 PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: Sensory box sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004179355.1	COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: mxa:MXAN_3783 hexapaptide repeat-containing transferase; SPTR: Transferase hexapeptide repeat family protein
YP_004179356.1	KEGG: dac:Daci_2332 beta-lactamase; SPTR: Putative uncharacterized protein
YP_004179357.1	KEGG: cpi:Cpin_1878 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179358.1	COGs: COG0308 Aminopeptidase N; KEGG: rba:RB5627 aminopeptidase; SPTR: Putative aminopeptidase; PFAM: Peptidase family M1
YP_004179359.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR017871: IPR003439; KEGG: sus:Acid_6574 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004179360.1	KEGG: xac:XAC1202 oligopeptide transporter; SPTR: Oligopeptide transporter
YP_004179361.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dma:DMR_42800 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004179362.1	COGs: COG2217 Cation transport ATPase; InterProIPR018303: IPR006404: IPR006416: IPR001757: IPR 008250: IPR005834; KEGG: dsh:Dshi_3947 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Cation transport ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_004179363.1	InterPro IPR019734: IPR001440: IPR013026; KEGG: mxa:MXAN_6419 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR domain protein
YP_004179364.1	InterPro IPR019734: IPR001440: IPR013026; KEGG: sus:Acid_3324 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR domain protein
YP_004179365.1	InterPro IPR019734: IPR001440: IPR013026; KEGG: ade:Adeh_3311 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR domain protein
YP_004179366.1	InterPro IPR019127; KEGG: rba:RB2461 hypothetical protein; PFAM: Exosortase EpsH-related; SPTR: Putative uncharacterized protein; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: eight transmembrane protein EpsH (proposed exosortase)
YP_004179367.1	KEGG: azl:AZL_027420 UvrD/REP helicase; SPTR: SNF2-related protein
YP_004179368.1	KEGG: bgl:bglu_1p1330 TonB family protein; SPTR: Predicted protein
YP_004179369.1	COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268: IPR006218; KEGG: psl:Psta_4054 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_004179370.1	KEGG: mgr:MGG_12809 hypothetical protein
YP_004179371.1	KEGG: cyn:Cyan7425_3991 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179372.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: pde:Pden_1042 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold
YP_004179373.1	COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR003593: IPR002078: IPR020441: IPR002197; KEGG: plm:Plim_0197 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Sigma-54 factor interaction domain-containing protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004179374.1	KEGG: plm:Plim_2351 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA cap guanine-N2 methyltransferase
YP_004179375.1	COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR017937: IPR006662: IPR013766: IPR017936; KEGG: psl:Psta_1606 thioredoxin domain protein; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin domain protein; PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_004179376.1	KEGG: psl:Psta_1030 endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase
YP_004179377.1	COGs: COG1335 Amidase related to nicotinamidase; KEGG: sus:Acid_4520 isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family
YP_004179378.1	InterPro IPR001007; KEGG: ctp:CTRG_06004 hypothetical protein; SPTR: Predicted protein
YP_004179379.1	KEGG: tcr:503551.20 hypothetical protein
YP_004179380.1	KEGG: rba:RB4002 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179381.1	KEGG: aba:Acid345_4727 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179382.1	KEGG: ank:AnaeK_3620 GAF sensor signal transduction histidine kinase; SPTR: GAF sensor signal transduction histidine kinase
YP_004179383.1	COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391: IPR002372; KEGG: plm:Plim_3570 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; SPTR: Predicted cell surface protein/ lipoprotein; PFAM: PQQ enzyme repeat
YP_004179384.1	COGs: COG0140 Phosphoribosyl-ATP pyrophosphohydrolase; InterPro IPR008179: IPR021130; KEGG: psl:Psta_4703 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; SPTR: Phosphoribosyl-ATP diphosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase
YP_004179385.1	COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: scl:sce3068 putative secreted protein; PFAM: Amidohydrolase 3; SPTR: Putative lipoprotein; PFAM: Amidohydrolase family
YP_004179386.1	KEGG: psl:Psta_2862 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain
YP_004179387.1	COGs: COG3970 Fumarylacetoacetate (FAA) hydrolase family protein; InterPro IPR002529; KEGG: scl:sce8243 fumarylacetoacetase family protein; PFAM: fumarylacetoacetate (FAA) hydrolase; SPTR: Fumarylacetoacetase family protein; PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_004179388.1	COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: aba:Acid345_3078 gamma-glutamyltransferase 2; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_004179389.1	COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: plm:Plim_0363 glucose sorbosone dehydrogenase; SPTR: Protein up-regulated by thyroid hormone-putative PQQ-dependent glucose dehydrogenase; PFAM: Glucose / Sorbosone dehydrogenase
YP_004179390.1	KEGG: rba:RB2907 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179391.1	COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR000846: IPR011770; KEGG: psl:Psta_0616 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_004179392.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931: IPR013589; KEGG: cag:Cagg_2254 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; transglutaminase domain protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase domain protein; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region
YP_004179393.1	COGs: COG2307 conserved hypothetical protein; InterPro IPR007296; KEGG: rca:Rcas_3760 hypothetical protein; PFAM: protein of unknown function DUF403; SPTR: Putative uncharacterized protein; PFAM: Bacterial domain of unknown function (DUF403)
YP_004179394.1	COGs: COG2308 conserved hypothetical protein; InterPro IPR016450: IPR007297: IPR007302; KEGG: hau:Haur_3415 hypothetical protein; PFAM: protein of unknown function DUF404; protein of unknown function DUF407; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF407); Domain of unknown function (DUF404)
YP_004179395.1	KEGG: amc:MADE_02276 vcbs repeat-containing protein; SPTR: Putative uncharacterized protein
YP_004179396.1	KEGG: cmi:CMM_2338 putative SAM-dependant methyltransferase; SPTR: Putative SAM-dependant methyltransferase
YP_004179397.1	KEGG: bta:518970 SH3 and multiple ankyrin repeat domains 1; SPTR: Putative uncharacterized protein Shank1
YP_004179398.1	KEGG: plm:Plim_1926 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179399.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR008089: IPR001509; KEGG: rmr:Rmar_1858 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004179400.1	COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR018109: IPR001645: IPR013221: IPR004101; KEGG: sti:Sthe_3030 FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; PRIAM: Tetrahydrofolate synthase; SPTR: FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_004179401.1	COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: bpf:BpOF4_07255 hypothetical protein; PFAM: protein of unknown function DUF423; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF423)
YP_004179402.1	InterPro IPR001623; KEGG: tcu:Tcur_1396 fibronectin type III domain protein; PFAM: heat shock protein DnaJ domain protein; SPTR: Fibronectin type III domain protein
YP_004179403.1	COGs: COG0761 Penicillin tolerance protein; InterPro IPR003451; KEGG: psl:Psta_0598 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; manually curated; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
YP_004179404.1	COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005794: IPR002376: IPR005793; KEGG: gtn:GTNG_1025 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_004179405.1	COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: plm:Plim_0246 peptide deformylase; PFAM: formylmethionine deformylase; SPTR: Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_004179406.1	KEGG: rba:RB12630 signal peptide; SPTR: Putative uncharacterized protein
YP_004179407.1	COGs: COG0495 Leucyl-tRNA synthetase; InterProIPR001412: IPR002302: IPR015413: IPR002300: IPR 013155; KEGG: plm:Plim_3733 leucyl-tRNA synthetase; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; aminoacyl-tRNA synthetase class Ia; tRNA synthetase class I (M); SPTR: Putative leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_004179408.1	InterPro IPR007055; KEGG: plm:Plim_3429 transport-associated protein; PFAM: transport-associated; SPTR: Transport-associated protein; PFAM: Putative phospholipid-binding domain
YP_004179409.1	KEGG: aas:Aasi_1452 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179410.1	COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845; KEGG: psl:Psta_1736 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: Purine or other phosphorylase family 1; PFAM: Phosphorylase superfamily
YP_004179411.1	COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017833: IPR007197; KEGG: ppd:Ppro_1192 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM superfamily; Domain of unknown function (DUF3463); TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH
YP_004179412.1	COGs: COG1657 Squalene cyclase; InterPro IPR006400: IPR018333: IPR001330; KEGG: psl:Psta_1738 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; PRIAM: Squalene--hopene cyclase; SPTR: Squalene-hopene cyclase; TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; PFAM: Prenyltransferase and squalene oxidase repeat; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase
YP_004179413.1	COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR000644: IPR006669: IPR006668: IPR006667; KEGG: dal:Dalk_4723 magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; SPTR: Magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE)
YP_004179414.1	InterPro IPR006311; KEGG: rba:RB2096 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3500); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004179415.1	InterPro IPR001258; KEGG: sus:Acid_1144 NHL repeat-containing protein; PFAM: NHL repeat containing protein; SPTR: Serine/threonine protein kinase; PFAM: NHL repeat
YP_004179416.1	KEGG: dma:DMR_08260 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179417.1	KEGG: psl:Psta_2852 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179418.1	KEGG: ara:Arad_3044 amino acid transporter protein; SPTR: Amino acid transporter protein
YP_004179419.1	COGs: COG1505 Serine protease of the peptidase family S9A; InterPro IPR002471: IPR002470: IPR004106; KEGG: npu:Npun_F5151 peptidase S9 prolyl oligopeptidase; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; PRIAM: Prolyl oligopeptidase; SPTR: Peptidase, S9A (Prolyl oligopeptidase) family, N-terminal beta-propeller domain protein; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family
YP_004179420.1	COGs: COG0031 Cysteine synthase; InterPro IPR005856: IPR005859: IPR001926; KEGG: psl:Psta_1771 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases
YP_004179421.1	InterPro IPR002052: IPR002296; KEGG: rca:Rcas_1074 modification methylase NspV; SPTR: Modification methylase NspV
YP_004179422.1	COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: tjr:TherJR_2271 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; SPTR: Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family
YP_004179423.1	COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850; KEGG: plm:Plim_0733 adenylate kinase; PFAM: adenylate kinase; SPTR: Adenylate kinase; PFAM: Adenylate kinase
YP_004179424.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: stp:Strop_3355 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family
YP_004179426.1	COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: gau:GAU_2005 glutamate-aspartate carrier protein; PFAM: sodium:dicarboxylate symporter; SPTR: Glutamate-aspartate carrier protein; PFAM: Sodium:dicarboxylate symporter family
YP_004179427.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR006638: IPR020612: IPR005839: IPR006463: IPR 013848: IPR007197: IPR002792; KEGG: plm:Plim_1655 RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Probable MiaB protein-putative tRNA-thiotransferase; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family
YP_004179428.1	KEGG: sro:Sros_2633 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179429.1	COGs: COG1391 Glutamine synthetase adenylyltransferase; InterPro IPR021158: IPR005190: IPR013546; KEGG: psl:Psta_3571 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; PRIAM: [Glutamate--ammonia-ligase] adenylyltransferase; SPTR: Glutamate-ammonia-ligase adenylyltransferase; PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase
YP_004179430.1	COGs: COG2234 aminopeptidase; InterPro IPR001478: IPR017441: IPR003137: IPR007484; KEGG: psl:Psta_3192 peptidase M28; PFAM: peptidase M28; protease-associated PA domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Probable aminopeptidase; PFAM: PA domain; PDZ domain (Also known as DHR or GLGF); Peptidase family M28
YP_004179431.1	InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996
YP_004179432.1	InterPro IPR013217; KEGG: mem:Memar_0201 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein
YP_004179433.1	InterPro IPR018062: IPR001120: IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179434.1	KEGG: azo:azo3956 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179435.1	KEGG: dra:DR_0458 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179436.1	COGs: COG3481 HD-superfamily hydrolase; InterPro IPR003607: IPR006675: IPR004365: IPR006674; KEGG: plm:Plim_2466 metal-dependent phosphohydrolase HD sub domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region; SPTR: CMP-binding protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; OB-fold nucleic acid binding domain; TIGRFAM: uncharacterized domain HDIG
YP_004179437.1	COGs: COG0557 Exoribonuclease R; InterPro IPR004476: IPR013223: IPR001900: IPR003029; KEGG: psl:Psta_4682 ribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SPTR: Ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases
YP_004179438.1	COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterPro IPR018511: IPR018512: IPR001343; KEGG: swp:swp_1383 hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding region; SPTR: Hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding repeat (2 copies)
YP_004179439.1	KEGG: sbi:SORBI_10g021900 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179440.1	InterPro IPR013229; KEGG: plm:Plim_2448 PEGA domain protein; PFAM: PEGA domain protein; SPTR: PEGA domain protein; PFAM: PEGA domain
YP_004179441.1	COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: rci:RCIX762 putative amidohydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: MelJ protein; PFAM: Carbon-nitrogen hydrolase
YP_004179442.1	KEGG: cci:CC1G_06487 hypothetical protein
YP_004179443.1	COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426: IPR000583: IPR001962: IPR017932; KEGG: scl:sce2064 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_004179444.1	KEGG: rmr:Rmar_0763 flagellar biosynthetic protein FliR; SPTR: Flagellar biosynthetic protein fliR; PFAM: Bacterial export proteins, family 1
YP_004179445.1	InterPro IPR002191; KEGG: hha:Hhal_0483 flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; SPTR: Probable flagellar biosynthetic protein fliQ; PFAM: Bacterial export proteins, family 3
YP_004179446.1	COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838; KEGG: adg:Adeg_2033 flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: Flagellar biosynthetic protein FliP; PFAM: FliP family
YP_004179447.1	KEGG: ske:Sked_02910 HNH endonuclease; SPTR: HNH endonuclease
YP_004179448.1	InterPro IPR000090; KEGG: aeh:Mlg_0710 flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein fliG; PFAM: FliG C-terminal domain
YP_004179449.1	KEGG: bfa:Bfae_21550 FHA domain-containing protein; SPTR: FHA domain-containing protein
YP_004179450.1	KEGG: bfa:Bfae_02760 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179451.1	COGs: COG0782 Transcription elongation factor; InterPro IPR006359: IPR001437; KEGG: rba:RB2780 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein; SPTR: Transcription elongation factor greA; TIGRFAM: transcription elongation factor GreA; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA
YP_004179452.1	KEGG: nde:NIDE0216 putative filamentous haemagglutinin; SPTR: Nucleoporin, putative (Serine peptidase, clan sp, family s59, putative)
YP_004179453.1	COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: plm:Plim_0127 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Probable ATP-binding/permease fusion ABC transporter; PFAM: Predicted permease
YP_004179454.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR017871: IPR003439; KEGG: psl:Psta_4732 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004179455.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: psl:Psta_4731 efflux transporter, RND family, MFP subunit; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004179456.1	KEGG: psl:Psta_4730 hypothetical protein; SPTR: Outer membrane protein-like protein
YP_004179457.1	InterPro IPR013519: IPR013517; KEGG: noc:Noc_2093 integrins alpha chain; PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; SPTR: Integrins alpha chain
YP_004179458.1	COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: shw:Sputw3181_2798 Fmu (Sun) domain-containing protein; PFAM: Fmu (Sun) domain protein; SPTR: NOL1/NOP2/sun family putative RNA methylase; PFAM: NOL1/NOP2/sun family
YP_004179459.1	KEGG: psl:Psta_1770 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase
YP_004179460.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR001431: IPR011765: IPR007863; KEGG: tro:trd_A0561 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16-like; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_004179461.1	KEGG: cwo:Cwoe_1217 transcriptional regulator, GntR family with aminotransferase domain; SPTR: Transcriptional regulator, GntR family with aminotransferase domain
YP_004179462.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: kra:Krad_1062 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004179463.1	InterPro IPR002656; KEGG: bja:bll7034 MDO-like protein; PFAM: acyltransferase 3; SPTR: MDO-like protein; PFAM: Acyltransferase family
YP_004179464.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: psl:Psta_3890 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Probable NADH-dependent dyhydrogenase related protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_004179465.1	KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide repeat domain protein
YP_004179466.1	KEGG: rba:RB3324 signal peptide; SPTR: Putative uncharacterized protein
YP_004179467.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR000838: IPR014284: IPR007627: IPR013249; KEGG: psl:Psta_4738 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Probable RNA polymerase sigma factor sigW; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179468.1	KEGG: hmg:100202799 hypothetical protein LOC100202799; SPTR: Putative uncharacterized protein
YP_004179469.1	KEGG: sna:Snas_5781 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179470.1	KEGG: rsc:RCFBP_20244 putative helicase, C_term RecB family exonuclease; SPTR: Putative uncharacterized protein
YP_004179471.1	COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814: IPR004636; KEGG: cyc:PCC7424_4452 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine transaminase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; acetylornithine and succinylornithine aminotransferases
YP_004179472.1	KEGG: wch:wcw_0825 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179473.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: plm:Plim_2239 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Probable membrane protein; PFAM: Protein of unknown function DUF58
YP_004179474.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: plm:Plim_2238 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase domain protein; PFAM: Transglutaminase-like superfamily
YP_004179475.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR003593: IPR016366: IPR011703; KEGG: psl:Psta_3996 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004179476.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: maq:Maqu_0100 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Response regulator receiver domain
YP_004179477.1	InterPro IPR004155; KEGG: plm:Plim_1500 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Cell division protein FtsK, putative
YP_004179478.1	KEGG: bts:Btus_0261 protein of unknown function DUF58; SPTR: Putative uncharacterized protein
YP_004179479.1	COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610: IPR001667: IPR003156; KEGG: psl:Psta_2157 single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Single-strand DNA-specific exonuclease; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ
YP_004179480.1	KEGG: psl:Psta_1891 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179481.1	KEGG: rmr:Rmar_2792 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1083)
YP_004179482.1	KEGG: rcu:RCOM_1609340 structural constituent of nuclear pore, putative; SPTR: Type I secretion target repeat protein
YP_004179483.1	COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR005836: IPR011831: IPR005835; KEGG: plm:Plim_1691 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase
YP_004179484.1	COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504; KEGG: plm:Plim_1587 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
YP_004179485.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR008271: IPR 017442: IPR000719; KEGG: psl:Psta_4044 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004179486.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123: IPR018221; KEGG: plm:Plim_2369 AMP-dependent synthetase and ligase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: AMP-dependent synthetase and ligase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_004179487.1	InterPro IPR011701; KEGG: vei:Veis_2436 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Probable transport transmembrane protein; PFAM: Major Facilitator Superfamily
YP_004179488.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: tye:THEYE_A1927 heat shock protein, HSP20 family; PFAM: heat shock protein Hsp20; SPTR: Heat shock protein, Hsp20 family; PFAM: Hsp20/alpha crystallin family
YP_004179489.1	InterPro IPR008538; KEGG: mar:MAE_05220 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820)
YP_004179490.1	InterPro IPR008538; KEGG: cyh:Cyan8802_0022 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820)
YP_004179491.1	InterPro IPR008538; KEGG: mar:MAE_05220 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820)
YP_004179492.1	InterPro IPR011031; KEGG: psl:Psta_4660 5'-nucleotidase/2' 3'-cyclic phosphodiesterase esterase-like protein; SPTR: 5'-nucleotidase/2' 3'-cyclic phosphodiesterase esterase-like protein
YP_004179493.1	InterPro IPR011467; KEGG: psl:Psta_1338 protein of unknown function DUF1573; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573)
YP_004179494.1	InterPro IPR001075; KEGG: dal:Dalk_0569 nitrogen-fixing NifU domain protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Nitrogen-fixing NifU domain protein; PFAM: NifU-like domain
YP_004179495.1	COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638: IPR004559: IPR007197: IPR010723; KEGG: psl:Psta_0038 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase
YP_004179496.1	InterPro IPR020476: IPR000086; KEGG: psl:Psta_2454 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; TIGRFAM: mutator mutT protein
YP_004179498.1	COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002347; KEGG: plm:Plim_3893 short-chain dehydrogenase/reductase SDR; SPTR: Enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: short chain dehydrogenase
YP_004179499.1	InterPro IPR013424: IPR011449; KEGG: rcu:RCOM_0136370 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004179501.1	InterPro IPR018247: IPR018242; KEGG: aba:Acid345_4018 integrin-like protein; PFAM: Dockerin type 1; SPTR: Integrin-like protein; PFAM: Dockerin type I repeat
YP_004179502.1	InterPro IPR000253; KEGG: cwo:Cwoe_0012 FHA domain containing protein; PFAM: Forkhead-associated protein; SPTR: FHA domain containing protein; PFAM: FHA domain
YP_004179503.1	KEGG: plm:Plim_0704 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179504.1	COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: psl:Psta_0392 cobyrinic acid ac-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004179505.1	InterPro IPR017937: IPR013740: IPR000866: IPR017936; KEGG: ote:Oter_0137 redoxin domain-containing protein; PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004179506.1	COGs: COG3828 conserved hypothetical protein; InterPro IPR013428: IPR013427: IPR009056; KEGG: psl:Psta_1431 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; Trehalose utilisation; Membrane bound L-sorbosone dehydrogenase; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004179507.1	InterPro IPR011444: IPR009056; KEGG: plm:Plim_0775 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553)
YP_004179508.1	InterPro IPR006311: IPR010869: IPR017909; KEGG: rba:RB2170 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004179509.1	COGs: COG3651 conserved hypothetical protein; InterPro IPR018714; KEGG: tel:tll1086 hypothetical protein; PFAM: Protein of unknown function DUF2237; SPTR: Tll1086 protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2237)
YP_004179510.1	COGs: COG0364 Glucose-6-phosphate 1-dehydrogenase; InterPro IPR019796: IPR001282; KEGG: cyb:CYB_1985 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; PRIAM: Glucose-6-phosphate dehydrogenase; SPTR: Glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_004179511.1	COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR016914: IPR001537; KEGG: psl:Psta_0030 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: tRNA/rRNA methyltransferase (SpoU); PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2
YP_004179512.1	InterPro IPR002123; KEGG: psl:Psta_3295 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_004179513.1	KEGG: psl:Psta_2133 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179514.1	COGs: COG0443 Molecular chaperone; InterPro IPR018181; KEGG: mxa:MXAN_5322 heat shock protein 70 family protein; SPTR: Heat shock protein 70 family protein; PFAM: Hsp70 protein
YP_004179515.1	KEGG: xom:XOO_4334 hypothetical protein; SPTR: Putative uncharacterized protein XOO4334; manually curated
YP_004179516.1	COGs: COG4637 ATPase; InterPro IPR014555; KEGG: sat:SYN_00010 ATPase; SPTR: ATPase
YP_004179517.1	COGs: COG3372 conserved hypothetical protein; InterPro IPR008508; KEGG: scl:sce6812 hypothetical protein; PFAM: protein of unknown function DUF790; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF790)
YP_004179518.1	COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014001: IPR001650: IPR006935: IPR014021; KEGG: scl:sce6811 DNA repair protein; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DNA repair protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_004179519.1	InterPro IPR013424: IPR011449; KEGG: ote:Oter_2200 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Extracellular repeat protein, HAF family; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004179520.1	KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20; SPTR: Peptidase C14, caspase catalytic subunit p20
YP_004179521.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR008271: IPR017442: IPR 005532: IPR000719; KEGG: cya:CYA_2859 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine kinase PKN9; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme
YP_004179522.1	COGs: COG0658 membrane metal-binding protein; InterPro IPR004477: IPR000073; KEGG: rba:RB9840 competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; alpha/beta hydrolase fold; SPTR: Probable competence protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; Metallo-beta-lactamase superfamily; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2
YP_004179523.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR018215: IPR001907; KEGG: psl:Psta_1762 endopeptidase Clp; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_004179524.1	COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR005215: IPR008881: IPR008880; KEGG: psl:Psta_1761 trigger factor; PFAM: trigger factor domain-containing protein; SPTR: Trigger factor; TIGRFAM: trigger factor; PFAM: Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor
YP_004179525.1	COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR006589: IPR011837: IPR004193: IPR006047; KEGG: dak:DaAHT2_0475 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX
YP_004179526.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: plm:Plim_1026 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family
YP_004179527.1	COGs: COG0368 Cobalamin-5-phosphate synthase; InterPro IPR003805; KEGG: plm:Plim_1024 cobalamin-5-phosphate synthase CobS; PFAM: cobalamin-5-phosphate synthase CobS; SPTR: Cobalamin-5-phosphate synthase CobS; PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase
YP_004179528.1	COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR017846: IPR003200; KEGG: plm:Plim_1023 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PRIAM: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; SPTR: Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
YP_004179529.1	COGs: COG2102 ATPase of PP-loop superfamily; InterPro IPR002761; KEGG: aba:Acid345_3648 protein of unknown function DUF71, ATPase; PFAM: protein of unknown function DUF71 ATP-binding region; SPTR: Putative uncharacterized protein; PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain
YP_004179530.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: rba:RB11981 ABC transporter substrate-binding protein; SPTR: Probable ABC transporter (Substrate-binding protein); PFAM: Periplasmic binding protein
YP_004179531.1	KEGG: plm:Plim_1022 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179532.1	InterPro IPR013442; KEGG: tra:Trad_1670 CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein APE2256; SPTR: CRISPR-associated protein, APE2256 family; TIGRFAM: CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein (Cas_APE2256); TIGRFAM: putative CRISPR-associated protein, APE2256 family
YP_004179533.1	KEGG: btk:BT9727_2837 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179534.1	COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR007087: IPR006119: IPR011109; KEGG: mag:amb1201 site-specific recombinase; PFAM: Resolvase domain; Recombinase; SPTR: Site-specific recombinase; PFAM: Recombinase; Resolvase, N terminal domain
YP_004179535.1	KEGG: sus:Acid_6199 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179536.1	COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: npu:Npun_R2704 hypothetical protein; PFAM: protein of unknown function DUF433; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF433)
YP_004179537.1	COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119: IPR011109; KEGG: fre:Franean1_0458 resolvase domain-containing protein; PFAM: Resolvase domain; Recombinase; SPTR: Resolvase domain; PFAM: Recombinase; Resolvase, N terminal domain
YP_004179538.1	KEGG: ngr:NAEGRDRAFT_37179 U5 snRNP-specific spliceosomal protein; SPTR: Putative uncharacterized protein
YP_004179539.1	KEGG: bmi:BMEA_A1879 pyridoxamine kinase; SPTR: Putative uncharacterized protein
YP_004179540.1	KEGG: pol:Bpro_2708 N-formylglutamate amidohydrolase
YP_004179541.1	KEGG: bfr:BF1384 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated
YP_004179542.1	COGs: COG3209 Rhs family protein; InterPro IPR003587: IPR006530: IPR006141; KEGG: plm:Plim_1036 AmoP; PFAM: YD repeat-containing protein; SMART: Hedgehog/intein hint domain protein; SPTR: AmoP; TIGRFAM: YD repeat protein; PFAM: RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies)
YP_004179543.1	InterPro IPR006342; KEGG: naz:Aazo_5202 FkbM family methyltransferase; SPTR: Methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family
YP_004179544.1	KEGG: cre:CHLREDRAFT_149710 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Mannosyltransferase putative
YP_004179545.1	KEGG: cgr:CAGL0J01771g hypothetical protein; SPTR: Similarity
YP_004179546.1	KEGG: xop:PXO_02602 transcriptional regulatory protein, C terminal; SPTR: Putative uncharacterized protein
YP_004179547.1	KEGG: dac:Daci_0928 AMP-dependent synthetase and ligase; SPTR: Putative uncharacterized protein
YP_004179548.1	KEGG: sit:TM1040_1281 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179549.1	KEGG: ppf:Pput_4105 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179550.1	KEGG: psl:Psta_2206 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179551.1	InterPro IPR018114; KEGG: lsg:lse_0520 peptidoglycan bound protein (LPXTG motif); SPTR: Peptidoglycan bound protein (LPXTG motif)
YP_004179552.1	KEGG: chy:CHY_1665 hypothetical protein; SPTR: Antigen A; PFAM: Phage major tail protein 2
YP_004179553.1	KEGG: avi:Avi_8200 replication protein B; SPTR: Replication protein B
YP_004179554.1	KEGG: htu:Htur_3964 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179555.1	KEGG: plm:Plim_2119 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179556.1	COGs: COG5471 conserved hypothetical protein; InterPro IPR011231; KEGG: sbl:Sbal_3597 gifsy-2 prophage; putative RecA/RadA recombinase; PFAM: protein of unknown function UCP030771; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2190)
YP_004179557.1	KEGG: dsa:Desal_2132 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Mu-like prophage major head subunit gpT
YP_004179558.1	COGs: COG5511 Bacteriophage capsid protein; InterPro IPR006429; KEGG: lhk:LHK_01658 phage portal protein, lambda family; PFAM: portal protein lambda; SPTR: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family
YP_004179559.1	KEGG: osa:4346641 hypothetical protein; SPTR: Putative Peptidyl Prolyl cis-trans isomerase
YP_004179560.1	KEGG: sfu:Sfum_3782 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179561.1	InterPro IPR000843: IPR014284; KEGG: sfu:Sfum_3783 ECF subfamily RNA polymerase sigma-24 factor; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179562.1	KEGG: oan:Oant_0214 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179563.1	KEGG: mag:amb0352 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179564.1	InterPro IPR007731; KEGG: mgm:Mmc1_2920 hypothetical protein; PFAM: protein of unknown function DUF669; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF669)
YP_004179565.1	COGs: COG4570 Holliday junction resolvase; InterPro IPR008822; KEGG: sgl:SG0745 putative phage endonuclease; PFAM: endodeoxyribonuclease RusA; SPTR: Endodeoxyribonuclease RusA; PFAM: Endodeoxyribonuclease RusA
YP_004179566.1	COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR014021: IPR001650: IPR006935: IPR018886: IPR 014001; KEGG: mag:amb0356 superfamily II DNA/RNA helicase; PFAM: type III restriction protein res subunit; helicase domain protein; Uncharacterised protein family UPF0547; SMART: helicase domain protein; DEAD-like helicase; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Uncharacterised protein family UPF0547
YP_004179567.1	COGs: COG3598 RecA-family ATPase; InterPro IPR015330: IPR014820; KEGG: aeh:Mlg_0791 ATPase-like protein; PFAM: Bifunctional DNA primase/polymerase; Primase 1; SPTR: Bifunctional DNA primase/polymerase; PFAM: Bifunctional DNA primase/polymerase, N-terminal; Primase C terminal 1 (PriCT-1)
YP_004179568.1	COGs: COG0863 DNA modification methylase; InterPro IPR003115: IPR002941: IPR002295: IPR015840; KEGG: cbe:Cbei_1632 DNA methylase N-4/N-6 domain-containing protein; PFAM: ParB domain protein nuclease; DNA methylase N-4/N-6 domain protein; SMART: ParB domain protein nuclease; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; ParB-like nuclease domain
YP_004179569.1	KEGG: rlt:Rleg2_1131 hypothetical protein; SPTR: ORF87
YP_004179570.1	KEGG: btr:Btr_0991 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179571.1	InterPro IPR015235; KEGG: pag:PLES_39201 hypothetical protein; PFAM: Domain of unknown function DUF1937; SPTR: Putative uncharacterized protein; PFAM: Nucleoside 2-deoxyribosyltransferase; Domain of unknown function (DUF1937)
YP_004179572.1	KEGG: rlt:Rleg2_0092 hypothetical protein; SPTR: Prepilin peptidase
YP_004179573.1	KEGG: dde:Dde_1858 restriction endonuclease-like; SPTR: Putative uncharacterized protein
YP_004179574.1	KEGG: xce:Xcel_1612 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179575.1	KEGG: plm:Plim_2131 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phage terminase large subunit (GpA)
YP_004179576.1	KEGG: dac:Daci_1505 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179577.1	KEGG: tai:Taci_1503 putative bacteriophage related protein; SPTR: Putative bacteriophage related protein; PFAM: Protein of unknown function (DUF2924)
YP_004179578.1	COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119: IPR011109; KEGG: hoh:Hoch_2866 resolvase domain protein; PFAM: Resolvase domain; Recombinase; SPTR: Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain
YP_004179579.1	KEGG: hoh:Hoch_2796 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179580.1	KEGG: dde:Dde_0892 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179581.1	KEGG: sfu:Sfum_3781 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179582.1	InterPro IPR006626; KEGG: rlg:Rleg_1748 hemolysin-type calcium-binding region; SPTR: Hemolysin-type calcium-binding region; PFAM: Protein of unknown function (DUF1565)
YP_004179583.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: plm:Plim_2616 RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179584.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789; KEGG: plm:Plim_2180 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver; PFAM: Response regulator receiver domain
YP_004179585.1	KEGG: ava:Ava_0857 putative phosphate transport system substrate-binding protein; SPTR: Putative phosphate transport system substrate-binding protein
YP_004179586.1	COGs: COG1543 conserved hypothetical protein; KEGG: noc:Noc_0099 glycoside hydrolase family protein; SPTR: Glycoside hydrolase, family 57
YP_004179587.1	KEGG: sbi:SORBI_08g017780 hypothetical protein
YP_004179588.1	KEGG: tpr:Tpau_1451 ABC transporter related protein; SPTR: Transmembrane transport protein
YP_004179589.1	COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: scl:sce6178 hypothetical protein; PFAM: protein of unknown function DUF885; SPTR: Putative uncharacterized protein; manually curated; PFAM: Bacterial protein of unknown function (DUF885)
YP_004179590.1	KEGG: cre:CHLREDRAFT_147815 flagellar associated protein; SPTR: Polysaccharide deacetylase
YP_004179591.1	COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176: IPR006108; KEGG: afw:Anae109_2134 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; SPTR: 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_004179592.1	KEGG: nhl:Nhal_2099 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179593.1	InterPro IPR017909: IPR006311; KEGG: rba:RB5268 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004179594.1	KEGG: mrd:Mrad2831_1437 inner-membrane translocator; SPTR: ABC transporter related protein
YP_004179595.1	InterPro IPR013249: IPR014284; KEGG: psl:Psta_3331 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179596.1	COGs: COG1490 D-Tyr-tRNAtyr deacylase; InterPro IPR003732; KEGG: afw:Anae109_0196 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_004179597.1	COGs: COG0554 Glycerol kinase; InterProIPR022272: IPR018483: IPR018484: IPR018485: IPR 005999; KEGG: gme:Gmet_1676 glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Glycerol kinase; TIGRFAM: glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_004179598.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: plm:Plim_0037 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004179599.1	COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: plm:Plim_0907 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme
YP_004179600.1	COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: sus:Acid_6143 ApbE family lipoprotein; PFAM: ApbE family lipoprotein; SPTR: Membrane-associated lipoprotein involved in thiamine biosynthesis; PFAM: ApbE family
YP_004179601.1	KEGG: plm:Plim_1979 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179602.1	KEGG: rca:Rcas_4229 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179603.1	COGs: COG0054 Riboflavin synthase beta-chain; InterPro IPR002180; KEGG: hna:Hneap_1866 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_004179605.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: psl:Psta_2011 dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase family 2; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Dolichyl-phosphate beta-D-mannosyltransferase; PFAM: Glycosyl transferase family 2
YP_004179606.1	KEGG: tcu:Tcur_1098 chromosome partitioning ATPase; SPTR: Mucin-like protein
YP_004179607.1	COGs: COG0498 Threonine synthase; InterPro IPR001926: IPR004450; KEGG: psl:Psta_0617 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase (ThrC); TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_004179608.1	KEGG: cef:CE1458 PTS glucose-specific IIABC; SPTR: PTS glucose-specific IIABC
YP_004179609.1	InterPro IPR010839; KEGG: sus:Acid_3874 hypothetical protein; PFAM: protein of unknown function DUF1446; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1446)
YP_004179610.1	KEGG: rpf:Rpic12D_0110 protein of unknown function DUF1446; SPTR: Putative uncharacterized protein
YP_004179611.1	InterPro IPR013424; KEGG: cai:Caci_0452 NHL repeat-containing protein; SPTR: Putative uncharacterized protein
YP_004179612.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR002197: IPR003593; KEGG: plm:Plim_0701 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Transcriptional regulatory protein zraR; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004179613.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467: IPR020003: IPR003661: IPR003594: IPR 004358; KEGG: plm:Plim_3849 ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: ATP-binding region ATPase domain protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004179614.1	InterPro IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179615.1	COGs: COG1692 conserved hypothetical protein; KEGG: psl:Psta_3982 calcineurin-like phosphoesterase; SPTR: Calcineurin-like phosphoesterase; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family
YP_004179616.1	COGs: COG1418 HD superfamily hydrolase; InterProIPR004088: IPR018111: IPR006674: IPR004087: IPR 003607: IPR017705: IPR006675; KEGG: psl:Psta_3981 RNA binding metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; SPTR: RNA binding metal dependent phosphohydrolase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG
YP_004179617.1	COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006037: IPR006153; KEGG: rba:RB11069 potassium/proton antiporter; PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; SPTR: Putative Na(+)/H(+) exchanger ycgO; PFAM: Sodium/hydrogen exchanger family; TrkA-C domain; TC 2.A.36
YP_004179618.1	InterPro IPR017909: IPR006311; KEGG: swi:Swit_2537 manganese and iron superoxide dismutase; SPTR: Manganese and iron superoxide dismutase
YP_004179619.1	COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: gvi:glr0111 ADP-ribosylglycohydrolase; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Glr0111 protein; PFAM: ADP-ribosylglycohydrolase
YP_004179620.1	KEGG: rrs:RoseRS_0098 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179621.1	InterPro IPR001818: IPR021190; KEGG: hwa:HQ1193A cell surface glycoprotein; PFAM: peptidase M10A and M12B matrixin and adamalysin; SPTR: Probable cell surface glycoprotein; PFAM: Matrixin
YP_004179622.1	COGs: COG0605 Superoxide dismutase; InterPro IPR019833: IPR019831: IPR019832: IPR001189; KEGG: xca:xccb100_1900 superoxidase dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain
YP_004179623.1	KEGG: cre:CHLREDRAFT_205670 hypothetical protein; SPTR: Predicted protein
YP_004179624.1	COGs: COG2360 Leu/Phe-tRNA-protein transferase; InterPro IPR004616; KEGG: pfo:Pfl01_3587 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; PRIAM: Leucyltransferase; SPTR: Leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_004179625.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173: IPR011611; KEGG: psl:Psta_3794 PfkB domain protein; PFAM: PfkB domain protein; SPTR: PfkB; PFAM: pfkB family carbohydrate kinase
YP_004179626.1	COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR001412: IPR020058: IPR020060: IPR004527; KEGG: rba:RB7600 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_004179627.1	KEGG: plm:Plim_3939 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179628.1	InterPro IPR005651; KEGG: sti:Sthe_1322 protein of unknown function DUF343; PFAM: protein of unknown function DUF343; SPTR: Putative uncharacterized protein
YP_004179629.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: psl:Psta_1537 peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: Alpha/beta hydrolase domain-containing protein; PFAM: alpha/beta hydrolase fold
YP_004179630.1	KEGG: bcj:BCAL1681 hypothetical protein; SPTR: Putative exported protein
YP_004179631.1	InterPro IPR001818: IPR021190: IPR006026; KEGG: nml:Namu_5076 serine/threonine protein kinase; PFAM: peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; SPTR: Serine/threonine protein kinase; PFAM: Matrixin; TIGRFAM: conserved repeat domain
YP_004179632.1	KEGG: osa:4336587 hypothetical protein; SPTR: OSIGBa0134H18.7 protein
YP_004179633.1	InterPro IPR000835; KEGG: psl:Psta_1616 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Probable marR-family transcription regulator; PFAM: MarR family
YP_004179634.1	COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: wch:wcw_1265 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Putative uncharacterized protein; PFAM: NADPH-dependent FMN reductase
YP_004179635.1	KEGG: lma:LmjF35.0540 proteophosphoglycan 5; SPTR: Proteophosphoglycan 5
YP_004179636.1	KEGG: hsa:4583 mucin 2, oligomeric mucus/gel-forming; SPTR: Mucin-2
YP_004179637.1	InterPro IPR017909: IPR010869: IPR006311; KEGG: sus:Acid_5708 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004179638.1	KEGG: rrs:RoseRS_4239 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179639.1	InterPro IPR006650: IPR019758: IPR000223; KEGG: plm:Plim_1125 peptidase S24 and S26 domain protein; SPTR: Peptidase S24 and S26 domain protein
YP_004179640.1	KEGG: rbi:RB2501_02765 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation
YP_004179641.1	InterPro IPR019410; KEGG: plm:Plim_1383 methyltransferase type 12; PFAM: Methyltransferase-16, putative; SPTR: Methyltransferase domain family; PFAM: Putative methyltransferase
YP_004179642.1	COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: azl:AZL_b05760 hypothetical protein; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Putative uncharacterized protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_004179643.1	KEGG: met:M446_0109 response regulator receiver protein; SPTR: Two component sensor kinase/response regulator hybrid
YP_004179644.1	COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR009056: IPR019775: IPR 019781: IPR001680; KEGG: sus:Acid_5711 hypothetical protein; PFAM: WD40 repeat, subgroup; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C
YP_004179645.1	InterPro IPR003343: IPR011444; KEGG: sus:Acid_5709 hypothetical protein; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004179646.1	InterPro IPR000014; KEGG: ade:Adeh_3529 PAS/PAC sensor hybrid histidine kinase; SMART: PAS domain containing protein; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; TIGRFAM: PAS domain S-box
YP_004179647.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: plm:Plim_3510 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004179648.1	KEGG: hoh:Hoch_6408 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SpoIVB peptidase S55
YP_004179649.1	COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR020580; KEGG: psl:Psta_4670 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein-like; SPTR: Glycine dehydrogenase (Decarboxylating); manually curated; PFAM: Glycine cleavage system P-protein
YP_004179650.1	COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: plm:Plim_2597 biotin/lipoate A/B protein ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: Biotin/lipoate A/B protein ligase; PFAM: Biotin/lipoate A/B protein ligase family
YP_004179651.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: psl:Psta_4736 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: FHA domain containing protein; PFAM: FHA domain
YP_004179652.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR016366; KEGG: mrb:Mrub_1314 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004179653.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: cpc:Cpar_1554 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat
YP_004179654.1	COGs: COG3485 Protocatechuate 3 4-dioxygenase beta subunit; InterPro IPR017909: IPR000627: IPR006311; KEGG: psl:Psta_3106 intradiol ring-cleavage dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; SPTR: Intradiol ring-cleavage dioxygenase; PFAM: Dioxygenase
YP_004179655.1	InterPro IPR017909: IPR010869: IPR006311; KEGG: psl:Psta_2356 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004179656.1	COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: ote:Oter_1589 major intrinsic protein; PFAM: major intrinsic protein; SPTR: Major intrinsic protein; PFAM: Major intrinsic protein
YP_004179657.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_1361 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179658.1	COGs: COG1203 helicase; InterPro IPR001650: IPR006474: IPR006483; KEGG: mba:Mbar_A3123 hypothetical protein; PFAM: helicase domain protein; SMART: helicase domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated helicase Cas3, Anaes-subtype; CRISPR-associated endonuclease Cas3-HD
YP_004179659.1	KEGG: tgr:Tgr7_2441 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179660.1	InterPro IPR013403; KEGG: tgr:Tgr7_2440 hypothetical protein; PFAM: CRISPR-associated protein GSU0053; SPTR: Putative uncharacterized protein; PFAM: CRISPR-associated protein GSU0053 (Cas_GSU0053); TIGRFAM: CRISPR-associated protein, GSU0053 family, N-terminal domain
YP_004179661.1	InterPro IPR019089; KEGG: bts:Btus_2681 CRISPR-associated protein; PFAM: CRISPR-associated protein, GSU0054; SPTR: Putative uncharacterized protein; PFAM: CRISPR-associated protein, GSU0054 family (Cas_GSU0054)
YP_004179662.1	InterPro IPR000489; KEGG: psl:Psta_2634 dihydropteroate synthase DhpS; PFAM: dihydropteroate synthase DHPS; SPTR: Dihydropteroate synthase DHPS; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase-related protein
YP_004179663.1	COGs: COG2457 conserved hypothetical protein; InterPro IPR007386; KEGG: psl:Psta_2631 protein of unknown function DUF447; PFAM: protein of unknown function DUF447; SPTR: Conserved protein; PFAM: Protein of unknown function (DUF447)
YP_004179664.1	KEGG: tcr:510989.60 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179665.1	KEGG: psl:Psta_4479 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559)
YP_004179666.1	COGs: COG3696 Putative silver efflux pump; InterPro IPR001036: IPR004763; KEGG: rba:RB11240 cation efflux system protein CZCA; PFAM: acriflavin resistance protein; SPTR: Cation efflux system protein CZCA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_004179667.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: plm:Plim_1584 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Cobalt-zinc-cadmium resistance protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004179668.1	KEGG: scl:sce5336 alpha/beta hydrolase fold protein; SPTR: Alpha/beta hydrolase fold protein
YP_004179669.1	KEGG: ote:Oter_4251 Ig family protein; SPTR: Conserved hypothetical membrane associated protein
YP_004179670.1	COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR006118: IPR006674: IPR003607; KEGG: bcl:ABC3321 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal-dependent phosphohydrolase; PFAM: HD domain
YP_004179671.1	KEGG: rba:RB11573 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179672.1	COGs: COG0358 DNA primase; InterPro IPR002694; KEGG: fsu:Fisuc_0292 zinc finger CHC2-family protein; SPTR: Zinc finger CHC2-family protein; PFAM: CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core
YP_004179674.1	COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR003148: IPR006037: IPR006153; KEGG: dol:Dole_0855 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; SPTR: Sodium/hydrogen exchanger; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family
YP_004179675.1	KEGG: ncr:NCU00388 hypothetical protein; SPTR: Putative HOS4 protein
YP_004179676.1	KEGG: svi:Svir_10910 predicted RND superfamily drug exporter; SPTR: Predicted RND superfamily drug exporter
YP_004179677.1	KEGG: rce:RC1_0935 peptidase, U32 family, putative; SPTR: Periplasmic binding protein and sugar binding domain of the LacI family protein
YP_004179678.1	InterPro IPR005079; KEGG: mbr:MONBRDRAFT_36634 hypothetical protein; PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; SPTR: Putative uncharacterized protein; PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
YP_004179679.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: sus:Acid_6183 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase
YP_004179680.1	KEGG: cbr:CBG23595 Hypothetical protein CBG23595; SPTR: Phf21b protein
YP_004179681.1	COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: sdl:Sdel_2220 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_004179682.1	KEGG: mpr:MPER_05333 hypothetical protein; SPTR: UDP-glucose:anthocysnin 5-O-glucosyltransferase
YP_004179683.1	COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: bmj:BMULJ_03600 putative glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2
YP_004179684.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rca:Rcas_3522 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Mannosyltransferase; PFAM: Glycosyl transferases group 1
YP_004179685.1	KEGG: plm:Plim_0618 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1570)
YP_004179686.1	InterPro IPR008271; KEGG: plm:Plim_0617 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family
YP_004179687.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pca:Pcar_2590 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1
YP_004179688.1	COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: psl:Psta_2002 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1015)
YP_004179689.1	COGs: COG0499 S-adenosylhomocysteine hydrolase; InterPro IPR020082: IPR000043: IPR015878; KEGG: ddf:DEFDS_1514 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; S-adenosyl-L-homocysteine hydrolase; PRIAM: Adenosylhomocysteinase; SPTR: Adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase
YP_004179690.1	KEGG: ani:AN6864.2 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179691.1	COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657: IPR004706; KEGG: nde:NIDE3708 putative arsenite resistance protein ArsB; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; TIGRFAM: arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein
YP_004179692.1	KEGG: chu:CHU_1515 protein-tyrosine-phosphatase; SPTR: Probable arsenate reductase
YP_004179693.1	InterPro IPR005243; KEGG: acp:A2cp1_1090 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2
YP_004179694.1	COGs: COG0701 permease; InterPro IPR005524; KEGG: tel:tll1886 hypothetical protein; PFAM: permease; SPTR: Tll1886 protein; PFAM: Predicted permease
YP_004179695.1	KEGG: shw:Sputw3181_2951 cytochrome c biogenesis protein, transmembrane region; SPTR: Cytochrome c biogenesis protein, transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region
YP_004179696.1	KEGG: shn:Shewana3_2349 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179697.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: nfi:NFIA_003560 UbiE/COQ5 family methyltransferase, putative; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase UbiE/COQ5 family protein; PFAM: Methyltransferase domain
YP_004179698.1	KEGG: tpt:Tpet_1749 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; PFAM: Arsenical resistance operon trans-acting repressor ArsD
YP_004179699.1	InterPro IPR001845; KEGG: afw:Anae109_3644 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family
YP_004179700.1	COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692: IPR014395; KEGG: ote:Oter_0831 penicillin amidase; PFAM: peptidase S45 penicillin amidase; SPTR: Penicillin amidase; PFAM: Penicillin amidase
YP_004179701.1	COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977; KEGG: sth:STH851 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; manually curated; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_004179702.1	COGs: COG1158 Transcription termination factor; InterProIPR011112: IPR011113: IPR000194: IPR011129: IPR 003593: IPR004665; KEGG: plm:Plim_3599 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; SMART: Cold shock protein; AAA ATPase; SPTR: Probable transcription termination factor; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho
YP_004179703.1	COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796: IPR017925: IPR003529: IPR012259; KEGG: aeh:Mlg_0423 dihydrofolate reductase; PFAM: dihydrofolate reductase region; PRIAM: Dihydrofolate reductase; SPTR: Dihydrofolate reductase; PFAM: Dihydrofolate reductase
YP_004179704.1	KEGG: hwa:HQ1193A cell surface glycoprotein; SPTR: Probable cell surface glycoprotein
YP_004179705.1	InterPro IPR007412; KEGG: psl:Psta_4010 anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor FlgM family protein; SPTR: Anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM
YP_004179706.1	COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: tye:THEYE_A0330 mce-related protein; PFAM: Mammalian cell entry related domain protein; SPTR: Mce-related protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004179707.1	COGs: COG0781 Transcription termination factor; InterPro IPR006027: IPR011605; KEGG: adg:Adeg_1279 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; SPTR: NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_004179708.1	COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR018247: IPR004013: IPR003141; KEGG: afw:Anae109_1278 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: PHP domain protein; PFAM: PHP domain
YP_004179709.1	COGs: COG0552 Signal recognition particle GTPase; InterPro IPR000897: IPR013822: IPR003593: IPR004390; KEGG: slp:Slip_1285 signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; SPTR: Signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_004179711.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR002078: IPR001789: IPR002197: IPR020441: IPR 003593; KEGG: dde:Dde_0109 two component Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two component transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004179712.1	KEGG: plm:Plim_1135 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179713.1	KEGG: plm:Plim_1137 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2752)
YP_004179714.1	COGs: COG0205 6-phosphofructokinase; InterPro IPR000023; KEGG: plm:Plim_2681 phosphofructokinase; PFAM: phosphofructokinase; SPTR: 6-phosphofructokinase I; PFAM: Phosphofructokinase
YP_004179715.1	COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR000399: IPR012001: IPR012000: IPR011766; KEGG: rce:RC1_0235 acetolactate synthase large subunit, putative; PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Thiamine pyrophosphate enzyme-like TPP binding protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_004179716.1	COGs: COG4586 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: psl:Psta_3780 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_004179717.1	COGs: COG4587 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: psl:Psta_3885 protein of unknown function DUF990; PFAM: protein of unknown function DUF990; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF990)
YP_004179718.1	COGs: COG3694 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: rba:RB6337 hypothetical protein; PFAM: protein of unknown function DUF990; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF990)
YP_004179719.1	COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; InterPro IPR003682: IPR001537; KEGG: sfu:Sfum_1152 methyltransferase GidB; PFAM: glucose inhibited division protein; tRNA/rRNA methyltransferase (SpoU); SPTR: Ribosomal RNA small subunit methyltransferase G 2; TIGRFAM: methyltransferase GidB; PFAM: SpoU rRNA Methylase family; rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB
YP_004179720.1	COGs: COG0622 phosphoesterase; InterPro IPR004843: IPR011152: IPR000979; KEGG: afw:Anae109_3653 phosphodiesterase; PFAM: metallophosphoesterase; SPTR: Putative serine/threonine protein phosphatase; TIGRFAM: phosphodiesterase, MJ0936 family; manually curated; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family
YP_004179721.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: ccs:CCNA_02753 aminoacyl peptidase; SPTR: Peptidase, S9A/B/C family, catalytic domain protein; PFAM: Prolyl oligopeptidase family
YP_004179722.1	InterPro IPR019004; KEGG: coc:Coch_1384 hypothetical protein; SPTR: Yqey-like protein; PFAM: Yqey-like protein
YP_004179723.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: gau:GAU_2836 Fur family transcriptional regulator; PFAM: ferric-uptake regulator; SPTR: Fur family transcriptional regulator; PFAM: Ferric uptake regulator family
YP_004179724.1	KEGG: bta:768080 transmembrane and coiled-coil domain family 2; SPTR: Transmembrane and coiled-coil domain family 2
YP_004179725.1	COGs: COG0114 Fumarase; InterPro IPR020557: IPR000362: IPR018951: IPR005677; KEGG: syn:slr0018 fumarate hydratase; PFAM: fumarate lyase; Fumarase C-like; SPTR: Fumarate hydratase class II; TIGRFAM: fumarate hydratase, class II; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II
YP_004179726.1	InterPro IPR013216; KEGG: sdl:Sdel_2220 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_004179727.1	COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: plm:Plim_1236 peptidase M22 glycoprotease; PFAM: peptidase M22 glycoprotease; SPTR: Peptidase M22 glycoprotease; PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ
YP_004179728.1	InterPro IPR004843: IPR011152; KEGG: plm:Plim_1711 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Probable phosphoesterase PH1616; PFAM: Calcineurin-like phosphoesterase
YP_004179729.1	COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708: IPR019998: IPR020001; KEGG: plm:Plim_1710 60 kDa inner membrane insertion protein; PFAM: 60 kDa inner membrane insertion protein; SPTR: Putative uncharacterized protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain
YP_004179730.1	InterPro IPR017969: IPR010496; KEGG: psl:Psta_2463 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080)
YP_004179731.1	COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286: IPR002818; KEGG: sus:Acid_5493 PfpI family intracellular peptidase; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_004179732.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: plm:Plim_0206 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Probable oxidoreductase; PFAM: NAD dependent epimerase/dehydratase family
YP_004179733.1	COGs: COG0176 Transaldolase; InterPro IPR018225: IPR001585: IPR004730; KEGG: alv:Alvin_2311 transaldolase; PFAM: Transaldolase; SPTR: Transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; TIGRFAM: transaldolase
YP_004179734.1	COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR018189: IPR000169: IPR001672; KEGG: mxa:MXAN_6908 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase
YP_004179735.1	KEGG: ank:AnaeK_1001 cytochrome bd ubiquinol oxidase subunit II; SPTR: Cytochrome bd ubiquinol oxidase subunit II
YP_004179736.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: plm:Plim_3131 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Probable tolQ protein; PFAM: MotA/TolQ/ExbB proton channel family
YP_004179737.1	InterPro IPR003400; KEGG: plm:Plim_3761 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_004179738.1	InterPro IPR003400; KEGG: plm:Plim_3133 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_004179739.1	KEGG: plm:Plim_3759 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179740.1	KEGG: fgr:FG02805.1 hypothetical protein; SPTR: Protocadherin gamma a7 isoform
YP_004179741.1	InterPro IPR019775; KEGG: hmg:100215998 hypothetical protein LOC100215998; SPTR: Minus agglutinin
YP_004179742.1	COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: psl:Psta_4163 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; PRIAM: C-terminal processing peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Periplasmic tail-specific proteinase; TIGRFAM: carboxyl-terminal protease; PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_004179743.1	COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: psl:Psta_4163 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; PRIAM: C-terminal processing peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Periplasmic tail-specific proteinase; TIGRFAM: carboxyl-terminal protease; PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_004179744.1	InterPro IPR007627: IPR013249: IPR014284; KEGG: nca:Noca_0767 FliA/WhiG family RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma factor, FliA/WhiG family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179745.1	KEGG: plm:Plim_1469 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179746.1	KEGG: tva:TVAG_007500 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein, putative
YP_004179747.1	KEGG: amd:AMED_4814 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179748.1	KEGG: tgu:100218739 hypothetical protein LOC100218739; SPTR: Putative uncharacterized protein
YP_004179749.1	KEGG: cyb:CYB_1139 TonB family protein; SPTR: TonB family protein
YP_004179750.1	KEGG: tgu:100221410 similar to RIKEN cDNA 2900083I11
YP_004179751.1	InterPro IPR003749: IPR010034; KEGG: psl:Psta_2343 thiamineS protein; PFAM: thiamineS protein; SPTR: ThiamineS protein; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal
YP_004179752.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: gau:GAU_3554 putative dipeptidyl peptidase; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region
YP_004179753.1	COGs: COG1850 Ribulose 1 5-bisphosphate carboxylase large subunit; KEGG: dac:Daci_5642 ribulose-bisphosphate carboxylase; SPTR: Ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase large chain, catalytic domain
YP_004179754.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: adg:Adeg_1011 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain
YP_004179755.1	COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822: IPR003594: IPR001932; KEGG: cli:Clim_1832 putative PAS/PAC sensor protein; PFAM: Stage II sporulation protein E; ATP-binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; SPTR: Putative PAS/PAC sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Stage II sporulation protein E (SpoIIE)
YP_004179756.1	COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645: IPR003658; KEGG: lhk:LHK_00821 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004179757.1	KEGG: caa:Caka_2962 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: ParB-like nuclease domain
YP_004179758.1	COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR001412: IPR001509; KEGG: gvi:glr3121 methionine adenosyltransferase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Glr3121 protein; PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase
YP_004179759.1	COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: psl:Psta_2761 transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; SPTR: Putative uncharacterized protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator)
YP_004179760.1	COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR020845: IPR000873: IPR011904; KEGG: aba:Acid345_3520 acetyl-coenzyme A synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: Acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase
YP_004179761.1	KEGG: psl:Psta_0185 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179762.1	InterPro IPR000866; KEGG: psl:Psta_0186 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004179763.1	KEGG: tbi:Tbis_2730 helicase domain-containing protein; SPTR: Helicase domain protein
YP_004179764.1	KEGG: bfu:BC1G_09600 hypothetical protein
YP_004179765.1	InterPro IPR000387: IPR000340; KEGG: olu:OSTLU_7942 predicted protein; PFAM: Dual specificity protein phosphatase; SPTR: Predicted protein; PFAM: Dual specificity phosphatase, catalytic domain
YP_004179766.1	InterPro IPR000834; KEGG: psl:Psta_3804 peptidase M14 carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: Peptidase M14, carboxypeptidase A; PFAM: Zinc carboxypeptidase
YP_004179767.1	InterPro IPR000834; KEGG: psl:Psta_3805 peptidase M14 carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SPTR: Peptidase M14 carboxypeptidase A; PFAM: Zinc carboxypeptidase
YP_004179768.1	KEGG: mex:Mext_3570 O-antigen polymerase; SPTR: Putative uncharacterized protein
YP_004179769.1	COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805: IPR015890: IPR019999: IPR005802; KEGG: mta:Moth_2108 aminodeoxychorismate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: Aminodeoxychorismate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade
YP_004179770.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_4208 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein
YP_004179771.1	COGs: COG3828 conserved hypothetical protein; KEGG: sus:Acid_5410 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation
YP_004179772.1	COGs: COG3387 Glucoamylase and related glycosyl hydrolase; KEGG: tjr:TherJR_2725 glycoside hydrolase 15-related protein; SPTR: Glycoside hydrolase 15-related protein
YP_004179773.1	KEGG: nwa:Nwat_1803 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179774.1	COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: plm:Plim_2408 hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase
YP_004179775.1	COGs: COG1029 Formylmethanofuran dehydrogenase subunit B; KEGG: plm:Plim_2299 formylmethanofuran dehydrogenase subunit B-like protein; SPTR: Formyltransferase/hydrolase complex subunit B
YP_004179776.1	KEGG: har:HEAR1234 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179777.1	COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: ade:Adeh_0989 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_004179778.1	COGs: COG0516 IMP dehydrogenase/GMP reductase; InterProIPR000644: IPR015875: IPR001093: IPR018529: IPR 005990; KEGG: psl:Psta_4277 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; PRIAM: IMP dehydrogenase; SMART: CBS domain containing protein; SPTR: Inosine-5-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_004179779.1	COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: plm:Plim_1649 Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; SPTR: Na+/H+ antiporter NhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; TC 2.A.33.1.1
YP_004179780.1	COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: scl:sce1562 glycosyl hydrolase; PFAM: glycoside hydrolase 15-related; SPTR: Glycoside hydrolase 15-related protein; PFAM: Glycosyl hydrolases family 15
YP_004179781.1	COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; InterPro IPR004588: IPR016425; KEGG: tpd:Teth39_1216 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein; SPTR: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_004179782.1	KEGG: csa:Csal_0765 nucleoside:H+ symporter; SPTR: Putative uncharacterized protein; PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter
YP_004179783.1	KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179784.1	COGs: COG1297 membrane protein; InterPro IPR004813: IPR004814; KEGG: ote:Oter_4609 OPT family oligopeptide transporter; PFAM: Oligopeptide transporter OPT superfamily protein; SPTR: Oligopeptide transporter, OPT family; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily
YP_004179785.1	KEGG: sli:Slin_5931 leucine-rich repeat, ribonuclease inhibitor subtype; SPTR: Putative regulatory subunit
YP_004179786.1	COGs: COG4287 PhoPQ-activated pathogenicity-related protein; InterPro IPR009199; KEGG: sus:Acid_2416 PhoPQ-activated pathogenicity-related protein; PFAM: PhoPQ-activated pathogenicity-related protein PqaA type; SPTR: PhoPQ-activated pathogenicity-related protein; PFAM: PhoPQ-activated pathogenicity-related protein
YP_004179787.1	KEGG: bpm:BURPS1710b_A1559 LysE family protein; SPTR: Putative uncharacterized protein
YP_004179788.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891: IPR002034: IPR013709: IPR005671; KEGG: psl:Psta_4375 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type
YP_004179789.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR001949: IPR002023: IPR011538: IPR019554: IPR 019575; KEGG: mno:Mnod_8359 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_004179790.1	InterPro IPR020084: IPR000086: IPR020476; KEGG: sti:Sthe_1370 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain
YP_004179791.1	COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016: IPR006015; KEGG: plm:Plim_2355 UspA domain protein; PFAM: UspA domain-containing protein; SPTR: UspA domain protein; PFAM: Universal stress protein family
YP_004179792.1	KEGG: ath:AT1G68690 ATP binding / protein kinase/ protein serine/threonine kinase; SPTR: F24J5.8 protein
YP_004179793.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR018300: IPR001544: IPR005785; KEGG: psl:Psta_0643 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; PRIAM: D-amino-acid transaminase; SPTR: Branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; D-amino acid aminotransferase
YP_004179794.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR015854: IPR017871: IPR003593; KEGG: plm:Plim_2517 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004179795.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: psl:Psta_0645 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease
YP_004179796.1	COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR006195: IPR004365: IPR004364: IPR018149: IPR 002313; KEGG: psl:Psta_0647 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_004179797.1	InterPro IPR009056: IPR013427; KEGG: plm:Plim_2734 membrane-bound dehydrogenase domain protein; SPTR: Heme-binding protein; TIGRFAM: heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004179798.1	KEGG: rme:Rmet_5987 negative regulation of plasmid gene expression transcriptional repressor activity; SPTR: Negative regulation of plasmid gene expression transcriptional repressor activity
YP_004179799.1	InterPro IPR005135; KEGG: sal:Sala_1018 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_004179800.1	COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044: IPR003644; KEGG: dal:Dalk_4321 hypothetical protein; PFAM: Na-Ca exchanger/integrin-beta4; SCP-like extracellular; SMART: Na-Ca exchanger/integrin-beta4; SPTR: SCP-like extracellular protein, putative; PFAM: Cysteine-rich secretory protein family; Calx-beta domain
YP_004179801.1	KEGG: tmz:Tmz1t_0364 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179802.1	KEGG: hoh:Hoch_5342 response regulator receiver; SPTR: p150 dynactin NUDM; PFAM: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
YP_004179803.1	COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); InterPro IPR006222: IPR013977: IPR006223; KEGG: plm:Plim_2455 glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; SPTR: Aminomethyltransferase; TIGRFAM: glycine cleavage system T protein; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein
YP_004179804.1	COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR003016: IPR002930: IPR017453; KEGG: mch:Mchl_0813 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_004179805.1	COGs: COG0403 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain; InterPro IPR020580; KEGG: psl:Psta_4671 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein-like; PRIAM: Glycine dehydrogenase (decarboxylating); SPTR: Glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein
YP_004179806.1	KEGG: rba:RB6045 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179807.1	InterPro IPR006342; KEGG: sfu:Sfum_3336 hypothetical protein; SPTR: Methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family
YP_004179808.1	COGs: COG4242 Cyanophycinase and related exopeptidase; InterPro IPR005320: IPR011811; KEGG: plm:Plim_2775 cyanophycinase; PFAM: peptidase S51 dipeptidase E; SPTR: Cyanophycinase; TIGRFAM: cyanophycinase; PFAM: Peptidase family S51; TIGRFAM: cyanophycinase
YP_004179809.1	COGs: COG0172 Seryl-tRNA synthetase; InterProIPR006195: IPR015866: IPR002314: IPR018156: IPR 002317; KEGG: rxy:Rxyl_1086 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase
YP_004179810.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: psl:Psta_2407 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: ArgE/DapE/Acy1 family protein; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_004179811.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: tfu:Tfu_0259 ribokinase; PFAM: PfkB domain protein; SPTR: Putative RbsK, Carbohydrate kinase, ribokinase family protein; PFAM: pfkB family carbohydrate kinase
YP_004179812.1	KEGG: xcv:XCV3229 two-component system sensor histidine kinase-response regulator hybrid protein PilL; SPTR: Two-component system sensor histidine kinase-response regulator hybrid protein PilL
YP_004179813.1	COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterProIPR014021: IPR001650: IPR011545: IPR014001: IPR 005259; KEGG: psl:Psta_4653 primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'
YP_004179814.1	COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR004820: IPR005248: IPR004821; KEGG: psl:Psta_3763 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_004179815.1	COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR001497: IPR014048; KEGG: afw:Anae109_3549 methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SPTR: Methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_004179816.1	COGs: COG1760 L-serine deaminase; InterPro IPR005131: IPR005130: IPR004644; KEGG: mpt:Mpe_A1429 L-serine ammonia-lyase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; SPTR: L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form
YP_004179818.1	COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001763: IPR013027: IPR004099; KEGG: psl:Psta_1619 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rhodanese-like domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_004179819.1	COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837: IPR004481; KEGG: pmy:Pmen_0851 CaCA family Na(+)/Ca(+) antiporter; PFAM: sodium/calcium exchanger membrane region; SPTR: Na+/Ca+ antiporter, CaCA family; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger (cax); K+-dependent Na+/Ca+ exchanger related-protein
YP_004179820.1	COGs: COG0421 Spermidine synthase; KEGG: plm:Plim_3243 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Spermine/spermidine synthase
YP_004179821.1	COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: rrs:RoseRS_1915 WD40 domain-containing protein; PFAM: WD40-like beta Propeller containing protein; SPTR: WD40-like Beta Propeller; PFAM: WD40-like Beta Propeller Repeat
YP_004179822.1	InterPro IPR017909: IPR010869; KEGG: sus:Acid_5708 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004179823.1	COGs: COG0143 Methionyl-tRNA synthetase; InterPro IPR015413: IPR014758: IPR002304; KEGG: mta:Moth_0048 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); SPTR: Methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase
YP_004179824.1	COGs: COG2365 Protein tyrosine/serine phosphatase; InterPro IPR016130; KEGG: tye:THEYE_A0750 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179825.1	KEGG: pjd:Pjdr2_0967 two component transcriptional regulator, AraC family; SPTR: Two component transcriptional regulator, AraC family
YP_004179826.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: geo:Geob_2923 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004179827.1	KEGG: plm:Plim_0186 protein-L-isoaspartate O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase
YP_004179828.1	COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: rba:RB12080 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004179829.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR019734: IPR000719: IPR013026: IPR008271: IPR 017442: IPR001440: IPR020635: IPR002290; KEGG: psl:Psta_0270 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain; Tetratricopeptide repeat
YP_004179830.1	COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR019734: IPR013026: IPR001440; KEGG: met:M446_6666 peptidase C14 caspase catalytic subunit P20; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Peptidase C14 caspase catalytic subunit p20; PFAM: Tetratricopeptide repeat
YP_004179831.1	COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; KEGG: rrs:RoseRS_1582 RNA procession exonuclease-like protein; SPTR: Exonuclease of the beta-lactamase fold involved in RNA processing-like protein; PFAM: Metallo-beta-lactamase superfamily
YP_004179832.1	COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310: IPR016059: IPR012309; KEGG: rrs:RoseRS_1583 ATP dependent DNA ligase; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; SPTR: ATP dependent DNA ligase; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region
YP_004179834.1	InterPro IPR013096; KEGG: tcu:Tcur_1342 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain
YP_004179835.1	COGs: COG0379 Quinolinate synthase; InterPro IPR003473; KEGG: plm:Plim_1159 quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; PRIAM: Quinolinate synthase; SPTR: Quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit
YP_004179836.1	COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR002792: IPR002716: IPR006596; KEGG: psl:Psta_0925 PilT protein domain protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; SPTR: PilT protein domain protein; PFAM: PIN domain
YP_004179837.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: dau:Daud_1871 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; SPTR: Histidine triad (HIT) protein; PFAM: HIT domain
YP_004179838.1	KEGG: rha:RHA1_ro00403 major facilitator transporter; SPTR: Metabolite transporter, MFS superfamily protein
YP_004179839.1	COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795: IPR004161: IPR005517: IPR000640: IPR 004540: IPR005225; KEGG: plm:Plim_2166 translation elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; SPTR: Translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; manually curated; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_004179840.1	KEGG: sti:Sthe_0323 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179841.1	COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; InterPro IPR000534: IPR012280: IPR000706; KEGG: plm:Plim_2484 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_004179842.1	KEGG: ote:Oter_0116 putative acetyl xylan esterase; SPTR: Probable acetyl xylan esterase
YP_004179843.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psl:Psta_2900 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase
YP_004179844.1	KEGG: pap:PSPA7_1173 OPT family oligopeptide transporter; SPTR: Oligopeptide transporter, OPT family
YP_004179845.1	COGs: COG2766 Putative Ser protein kinase; InterPro IPR013153: IPR010650; KEGG: psl:Psta_2229 putative serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; SPTR: Putative serine protein kinase, PrkA; PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain
YP_004179846.1	COGs: COG2718 conserved hypothetical protein; InterPro IPR006698; KEGG: psl:Psta_2230 protein of unknown function DUF444; PFAM: protein of unknown function DUF444; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF444)
YP_004179847.1	COGs: COG2719 conserved hypothetical protein; InterPro IPR018486: IPR007390; KEGG: afw:Anae109_2539 SpoVR family protein; PFAM: SpoVR family protein; SPTR: SpoVR family protein; PFAM: SpoVR like protein
YP_004179848.1	KEGG: psl:Psta_2232 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated
YP_004179849.1	COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: ilo:IL0275 ABC-type Na+ efflux pump, permease component; SPTR: ABC-type Na+ efflux pump, permease component
YP_004179850.1	COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: ilo:IL0274 ABC-type Na+ efflux pump, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004179851.1	COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR000573: IPR004431; KEGG: bpu:BPUM_2466 isopropylmalate isomerase small subunit; PFAM: aconitate hydratase domain-containing protein; SPTR: 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_004179852.1	COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterPro IPR001030: IPR004430: IPR018136; KEGG: sth:STH2116 isopropylmalate isomerase large subunit; PFAM: aconitate hydratase domain-containing protein; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit
YP_004179853.1	KEGG: mxa:MXAN_5625 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179854.1	KEGG: rrs:RoseRS_0824 glycosyltransferase; SPTR: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004179855.1	COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182; KEGG: dau:Daud_1142 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004179856.1	COGs: COG3386 Gluconolactonase; InterPro IPR013017: IPR001258; KEGG: rba:RB10820 ring finger protein HAC1; PFAM: NHL repeat containing protein; SPTR: Ring finger protein; PFAM: NHL repeat
YP_004179857.1	InterPro IPR002035: IPR010768; KEGG: psl:Psta_2128 von Willebrand factor type A; PFAM: protein of unknown function DUF1355; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355)
YP_004179858.1	KEGG: sds:SDEG_0121 cytochrome d ubiquinol oxidase, subunit II; SPTR: Cytochrome d ubiquinol oxidase, subunit II
YP_004179859.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: psl:Psta_2130 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58
YP_004179860.1	KEGG: nda:Ndas_3747 putative integral membrane protein; SPTR: Putative integral membrane protein
YP_004179861.1	InterPro IPR002035; KEGG: psl:Psta_2131 von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: Aerotolerance regulator N-terminal
YP_004179862.1	COGs: COG0260 Leucyl aminopeptidase; InterPro IPR000819: IPR008283; KEGG: psl:Psta_1049 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; SPTR: Cytosol aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_004179863.1	KEGG: psl:Psta_2350 esterase; SPTR: Putative uncharacterized protein
YP_004179864.1	COGs: COG0183 Acetyl-CoA acetyltransferase; InterProIPR020615: IPR020610: IPR001412: IPR020613: IPR 020616: IPR020617: IPR002155; KEGG: gau:GAU_1289 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_004179865.1	COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: ank:AnaeK_1452 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1343)
YP_004179866.1	COGs: COG2971 N-acetylglucosamine kinase; InterPro IPR002731; KEGG: rba:RB7515 putative N-acetylglucosamine kinase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: Putative uncharacterized protein; PFAM: BadF/BadG/BcrA/BcrD ATPase family
YP_004179867.1	COGs: COG2103 sugar phosphate isomerase; InterPro IPR005488: IPR005486: IPR001347; KEGG: pak:HMPREF0675_4202 N-acetylmuramic acid 6-phosphate etherase; PFAM: sugar isomerase (SIS); SPTR: Glucokinase regulatory-like protein; TIGRFAM: glucokinase regulatory-like protein; PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase
YP_004179868.1	COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942: IPR018496: IPR006145: IPR000748; KEGG: plm:Plim_4141 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_004179869.1	COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR017927: IPR008333: IPR001433: IPR019480: IPR 012165; KEGG: psl:Psta_4647 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: Dihydroorotate dehydrogenase electron transfer subunit; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_004179870.1	InterPro IPR010916: IPR006650: IPR001434; KEGG: psl:Psta_0523 conserved repeat domain protein; SPTR: 60 kDa outer membrane protein; TIGRFAM: conserved repeat domain protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain
YP_004179871.1	KEGG: plm:Plim_2088 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179872.1	COGs: COG4276 conserved hypothetical protein; InterPro IPR005031; KEGG: scl:sce1328 hypothetical protein; PFAM: cyclase/dehydrase; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004179873.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR013838: IPR000683: IPR006311; KEGG: rba:RB3070 putative oxidoreductase; PFAM: oxidoreductase domain protein; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004179874.1	COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; KEGG: psl:Psta_2871 N-acetylglucosamine-6-phosphate deacetylase; PRIAM: N-acetylglucosamine-6-phosphate deacetylase; SPTR: N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase
YP_004179875.1	COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: dat:HRM2_02440 PhoU2; PFAM: PhoU family protein; SPTR: Putative uncharacterized protein; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_004179876.1	COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890: IPR011625: IPR019565; KEGG: psl:Psta_3267 alpha-2-macroglobulin domain protein; PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; Alpha-2-macroglobulin, thiol-ester bond-forming; SPTR: Putative uncharacterized protein; PFAM: Alpha-macro-globulin thiol-ester bond-forming region; Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region
YP_004179877.1	KEGG: gym:GYMC10_4089 ABC transporter related protein; SPTR: Putative uncharacterized protein M88B7.1f
YP_004179878.1	KEGG: sus:Acid_1421 glycosyl transferase family protein; SPTR: Tetratricopeptide repeat protein
YP_004179879.1	COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: rba:RB1270 putative translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP
YP_004179880.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR020904: IPR002198; KEGG: sli:Slin_5818 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004179881.1	COGs: COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain; InterPro IPR006650; KEGG: rca:Rcas_2756 hypothetical protein; SPTR: Uncharacterized protein containing SIS (Sugar isomerase) phosphosugar binding domain-like protein
YP_004179882.1	COGs: COG0854 Pyridoxal phosphate biosynthesis protein; InterPro IPR004569; KEGG: dia:Dtpsy_2616 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase
YP_004179883.1	InterPro IPR013097; KEGG: psl:Psta_3643 stress responsive alpha-beta barrel domain protein; PFAM: Stress responsive alpha-beta barrel domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Stress responsive A/B Barrel Domain
YP_004179884.1	InterPro IPR009056: IPR003088: IPR013428: IPR013427; KEGG: dfe:Dfer_5354 membrane-bound dehydrogenase domain protein; PFAM: cytochrome c class I; SPTR: Putative uncharacterized protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type
YP_004179885.1	InterPro IPR018512: IPR018511: IPR001343; KEGG: cpb:Cphamn1_0514 RTX toxins and related Ca2+-binding protein; PFAM: Hemolysin-type calcium-binding region; SPTR: Hemolysin-type calcium-binding protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies)
YP_004179886.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR017896: IPR016166: IPR017900: IPR006094: IPR 004113: IPR004017; KEGG: rrs:RoseRS_3858 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: FAD linked oxidase domain protein; PFAM: Cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain
YP_004179887.1	InterPro IPR019782; KEGG: gob:Gobs_1160 WD40 repeat, subgroup; SPTR: WD40 repeat, subgroup
YP_004179888.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_0697 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179889.1	KEGG: vvi:100248137 similar to cysteine protease Cp5; SPTR: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x
YP_004179890.1	KEGG: kla:KLLA0C03740g hypothetical protein; SPTR: tRNA (guanine-N(1)-)-methyltransferase
YP_004179891.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179892.1	InterPro IPR013517: IPR011519; KEGG: aba:Acid345_0425 hypothetical protein; PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; SPTR: Putative uncharacterized protein; PFAM: ASPIC and UnbV; FG-GAP repeat
YP_004179893.1	COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: psl:Psta_4166 three-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; SPTR: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
YP_004179894.1	COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR014018: IPR011115: IPR000185: IPR020937: IPR 011130: IPR011116: IPR004027; KEGG: plm:Plim_2368 preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; SPTR: Preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_004179895.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR020635: IPR002290: IPR019734: IPR 017441: IPR008271: IPR017442: IPR001440; KEGG: rop:ROP_51280 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Putative serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004179896.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR000792: IPR013249: IPR014284; KEGG: rba:RB138 hypothetical protein; PFAM: Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179897.1	COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037; KEGG: rca:Rcas_0931 TrkA domain-containing protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain
YP_004179898.1	COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterProIPR001943: IPR014021: IPR001650: IPR014001: IPR 004807: IPR006935; KEGG: plm:Plim_0981 excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: UvrABC system protein B; TIGRFAM: excinuclease ABC, B subunit; manually curated; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit
YP_004179899.1	COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638: IPR004393; KEGG: cag:Cagg_1774 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Quinolinate phosphoribosyl transferase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase
YP_004179900.1	COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004143: IPR004408; KEGG: mxa:MXAN_4152 BirA bifunctional protein; PFAM: biotin/lipoate A/B protein ligase; SPTR: BirA bifunctional protein; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_004179901.1	InterPro IPR000537; KEGG: cyt:cce_4454 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR: Putative uncharacterized protein; PFAM: UbiA prenyltransferase family
YP_004179903.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: psl:Psta_3320 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat
YP_004179904.1	COGs: COG1643 HrpA-like helicase; InterProIPR014021: IPR001650: IPR014001: IPR007502: IPR 013689: IPR010225; KEGG: psl:Psta_3120 ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase domain protein; helicase-associated domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB
YP_004179905.1	KEGG: dvi:Dvir_GJ16689 GJ16689 gene product from transcript GJ16689-RA; SPTR: GJ16689
YP_004179906.1	KEGG: maq:Maqu_0305 acriflavin resistance protein; SPTR: Putative uncharacterized protein
YP_004179907.1	InterPro IPR019825: IPR011723; KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: MJ0042 family finger-like protein; TIGRFAM: MJ0042 family finger-like domain
YP_004179908.1	KEGG: nvi:100115235 similar to gag-pol polyprotein; SPTR: TonB family protein
YP_004179909.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR013027: IPR000815: IPR012999: IPR004099: IPR 006258; KEGG: phe:Phep_3001 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_004179910.1	InterPro IPR003961: IPR006558: IPR004843; KEGG: plm:Plim_2974 metallophosphoesterase; PFAM: metallophosphoesterase; SMART: LamG domain protein jellyroll fold domain protein; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_004179911.1	COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR002028: IPR018204; KEGG: psl:Psta_3809 tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_004179912.1	KEGG: hsa:57597 BAH domain and coiled-coil containing 1; SPTR: BAH and coiled-coil domain-containing protein 1
YP_004179913.1	COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR006653: IPR001926: IPR006654; KEGG: plm:Plim_3191 tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Tryptophan synthase, beta subunit; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_004179914.1	COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: rca:Rcas_3629 hypothetical protein; PFAM: protein of unknown function DUF52; SPTR: Putative uncharacterized protein; PFAM: Memo-like protein
YP_004179915.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rmr:Rmar_2446 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold
YP_004179916.1	COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR013027; KEGG: hau:Haur_1711 FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_004179917.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: psl:Psta_3932 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily
YP_004179918.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR020635: IPR002290: IPR017441: IPR 008271: IPR017442; KEGG: rba:RB9854 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004179919.1	COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001130: IPR012022; KEGG: psl:Psta_3790 TatD-related deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; SPTR: TatD-related deoxyribonuclease; PFAM: TatD related DNase
YP_004179920.1	KEGG: rba:RB1043 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179921.1	KEGG: sus:Acid_4316 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179922.1	COGs: COG5276 conserved hypothetical protein; InterPro IPR011031: IPR013211; KEGG: sus:Acid_4317 LVIVD repeat-containing protein; PFAM: LVIVD repeat-containing protein; SPTR: LVIVD repeat protein; PFAM: LVIVD repeat
YP_004179923.1	COGs: COG4188 dienelactone hydrolase; KEGG: gvi:glr1689 hypothetical protein; SPTR: Glr1689 protein; PFAM: Chlorophyllase
YP_004179924.1	COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: scl:sce9324 putative molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: Putative molybdopterin-guanine dinucleotide biosynthesis protein A; manually curated
YP_004179925.1	COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: rba:RB10374 prolipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; SPTR: Probable prolipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_004179926.1	COGs: COG2079 Uncharacterized protein involved in propionate catabolism; InterPro IPR005656; KEGG: nde:NIDE3125 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein; PRIAM: 2-methylcitrate dehydratase; SPTR: 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family
YP_004179927.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: psl:Psta_2822 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase family, NAD-binding Rossmann fold protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004179928.1	COGs: COG3823 Glutamine cyclotransferase; InterPro IPR007788; KEGG: plm:Plim_1300 glutamine cyclotransferase; PFAM: glutamine cyclotransferase; SPTR: Putative glutamine cyclotransferase; PFAM: Glutamine cyclotransferase
YP_004179929.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR003593: IPR002197; KEGG: mxa:MXAN_0172 sigma-54 dependent DNA-binding response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Sigma-54 dependent DNA-binding response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004179930.1	COGs: COG5002 Signal transduction histidine kinase; InterProIPR005467: IPR003660: IPR004358: IPR003661: IPR 003594: IPR000014; KEGG: ote:Oter_1644 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004179931.1	COGs: COG0474 Cation transport ATPase; InterProIPR006415: IPR018303: IPR004014: IPR008250: IPR 005834: IPR006068: IPR001757; KEGG: bwe:BcerKBAB4_3981 magnesium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Magnesium-transporting ATPase, P-type 1; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase
YP_004179932.1	COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: bca:BCE_4213 MgtC family protein; PFAM: MgtC/SapB transporter; SPTR: Mg(2+) transport ATPase protein C; PFAM: MgtC family
YP_004179933.1	COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR000121: IPR002192: IPR008279: IPR010121; KEGG: ddf:DEFDS_0235 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase
YP_004179934.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593: IPR007831: IPR001482; KEGG: rba:RB12768 type IV fimbrial assembly protein PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: Type IV fimbrial assembly protein PilB; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E
YP_004179935.1	COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR003593: IPR001482: IPR006321; KEGG: plm:Plim_0409 twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Twitching mobility protein PilT; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_004179936.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR007831; KEGG: plm:Plim_0408 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E
YP_004179937.1	COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076; KEGG: plm:Plim_0407 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type IV fimbrial assembly protein PilC; PFAM: Bacterial type II secretion system protein F domain
YP_004179938.1	InterPro IPR000983: IPR001120: IPR012902; KEGG: plm:Plim_0406 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179939.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_0405 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179940.1	COGs: COG4970 Tfp pilus assembly protein FimT; InterPro IPR001120: IPR012902; KEGG: xac:XAC2669 pre-pilin like leader sequence; SPTR: Pre-pilin like leader sequence; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179941.1	InterPro IPR012902; KEGG: plm:Plim_0403 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179942.1	InterPro IPR017871: IPR001120: IPR012902; KEGG: plm:Plim_0402 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179943.1	KEGG: psl:Psta_0540 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179944.1	InterPro IPR001120: IPR012902; KEGG: rba:RB2782 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179945.1	KEGG: mar:MAE_26830 hypothetical protein; SPTR: Similarity with the tr|Q9PFN1|Q9PFN1
YP_004179946.1	InterPro IPR017936: IPR000866; KEGG: rba:RB9164 putative thiol-disulfide isomerase or thioredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; Redoxin
YP_004179947.1	InterPro IPR000209: IPR018247; KEGG: ton:TON_1355 subtilisin-like serine protease precursor; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Putative uncharacterized protein
YP_004179948.1	COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: rxy:Rxyl_1321 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; manually curated; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_004179949.1	COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR019818: IPR001804: IPR014273; KEGG: mrb:Mrub_1134 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase
YP_004179950.1	COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR020575: IPR001404: IPR003594: IPR020576; KEGG: plm:Plim_1800 heat shock protein HSP90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SPTR: Chaperone protein htpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein
YP_004179951.1	COGs: COG3342 conserved hypothetical protein; InterPro IPR010430: IPR002477; KEGG: tro:trd_A0702 major pilin protein FimA; PFAM: protein of unknown function DUF1028; Peptidoglycan-binding domain 1 protein; SPTR: Major pilin protein FimA; PFAM: Putative peptidoglycan binding domain; Family of unknown function (DUF1028)
YP_004179952.1	COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844: IPR018370: IPR002423; KEGG: psl:Psta_3731 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_004179953.1	COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR001476: IPR018369: IPR020818; KEGG: rba:RB10627 GroES/HSP10-like protein; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin 2; PFAM: Chaperonin 10 Kd subunit
YP_004179954.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001940: IPR001254; KEGG: psl:Psta_3916 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; SPTR: 2-alkenal reductase; PFAM: Trypsin
YP_004179955.1	COGs: COG2908 conserved hypothetical protein; KEGG: aba:Acid345_4016 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179956.1	COGs: COG1201 Lhr-like helicase; InterProIPR014021: IPR001650: IPR014001: IPR003593: IPR 011545: IPR013701; KEGG: sth:STH886 ATP-dependent DNA helicase; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; AAA ATPase; helicase domain protein; SPTR: ATP-dependent DNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase
YP_004179957.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: rrs:RoseRS_0359 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004179958.1	COGs: COG0327 conserved hypothetical protein; InterPro IPR002678: IPR017221; KEGG: plm:Plim_2674 protein of unknown function DUF34; PFAM: protein of unknown function DUF34; SPTR: Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family
YP_004179959.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR018300: IPR001544; KEGG: rxy:Rxyl_0760 aminotransferase, class IV; PFAM: aminotransferase class IV; SPTR: Aminotransferase, class IV; PFAM: Aminotransferase class IV
YP_004179960.1	KEGG: psl:Psta_1684 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179961.1	COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787: IPR018313; KEGG: cwo:Cwoe_1076 peptidase M29 aminopeptidase II; PFAM: peptidase M29 aminopeptidase II; SPTR: Peptidase M29 aminopeptidase II; PFAM: Thermophilic metalloprotease (M29)
YP_004179962.1	COGs: COG0705 membrane protein; InterPro IPR013838: IPR002610; KEGG: plm:Plim_1385 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Probable glpG protein; PFAM: Protein of unknown function (DUF3582); Rhomboid family
YP_004179963.1	KEGG: nha:Nham_2630 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2029)
YP_004179964.1	KEGG: ebi:EbC_16470 ribonuclease E; SPTR: Chromosome 17 SCAF15006, whole genome shotgun sequence
YP_004179965.1	COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR001159: IPR000999: IPR011907; KEGG: psl:Psta_3659 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; PRIAM: Ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; SPTR: Ribonuclease III; TIGRFAM: ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial
YP_004179966.1	COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterProIPR011768: IPR013185: IPR001059: IPR015365: IPR 020599; KEGG: rba:RB12577 translation elongation factor EF-P; PFAM: Elongation factor P; Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein; SPTR: Translation elongation factor EF-P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_004179967.1	COGs: COG3281 Uncharacterized protein probably involved in trehalose biosynthesis; InterPro IPR002575; KEGG: afw:Anae109_3070 1,4-alpha-glucan branching enzyme; PFAM: aminoglycoside phosphotransferase; SPTR: 1,4-alpha-glucan branching enzyme; manually curated; TIGRFAM: trehalose synthase-fused probable maltokinase
YP_004179968.1	KEGG: tva:TVAG_078700 hypothetical protein; SPTR: Predicted protein
YP_004179969.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: psl:Psta_0222 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; manually curated; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004179970.1	COGs: COG0177 EndoIII-related endonuclease; KEGG: dma:DMR_17660 putative DNA glycosylase; SPTR: HhH-GPD protein
YP_004179971.1	InterPro IPR011444; KEGG: sus:Acid_1145 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004179973.1	InterPro IPR019734: IPR013026; KEGG: psl:Psta_2415 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004179974.1	KEGG: plm:Plim_0513 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: MotA/TolQ/ExbB proton channel family
YP_004179975.1	InterPro IPR008009; KEGG: sus:Acid_6164 Ig family protein; PFAM: Ig family protein; SPTR: Ig family protein; PFAM: Putative Ig domain
YP_004179976.1	InterPro IPR001120: IPR012902; KEGG: psl:Psta_4737 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004179978.1	COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterProIPR017926: IPR011702: IPR006220: IPR001317: IPR 000991: IPR001674: IPR004739; KEGG: psl:Psta_2814 GMP synthase, large subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; SPTR: GMP synthase, large subunit; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_004179979.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016: IPR014017: IPR000212; KEGG: rba:RB12363 ATP-dependent DNA helicase; PFAM: UvrD/REP helicase; SPTR: ATP-dependent DNA helicase; PFAM: UvrD/REP helicase
YP_004179980.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: rrs:RoseRS_1377 aminotransferase, class V; PFAM: aminotransferase class V; SPTR: Aminotransferase, class V; PFAM: Aminotransferase class-V
YP_004179981.1	COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608; KEGG: psl:Psta_1894 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR: D-threonine aldolase, metal-activated pyridoxal enzyme; PFAM: Alanine racemase, N-terminal domain
YP_004179983.1	COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterPro IPR016166: IPR002346; KEGG: sus:Acid_2421 molybdopterin dehydrogenase, FAD-binding; PFAM: molybdopterin dehydrogenase FAD-binding; SPTR: Molybdopterin dehydrogenase, FAD-binding; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, beta subunit
YP_004179984.1	COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR000674: IPR008274; KEGG: sus:Acid_2420 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YP_004179985.1	COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterProIPR001041: IPR017909: IPR006058: IPR019546: IPR 002888: IPR006311; KEGG: sus:Acid_2419 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004179986.1	COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR000253: IPR003018: IPR001932: IPR019756: IPR 010822; KEGG: psl:Psta_4013 protein serine phosphatase with GAF(s) sensor(s); PFAM: Stage II sporulation protein E; Forkhead-associated protein; SMART: protein phosphatase 2C domain protein; Forkhead-associated protein; GAF domain protein; SPTR: Protein serine phosphatase with GAF(S) sensor(S); PFAM: GAF domain; Stage II sporulation protein E (SpoIIE); FHA domain
YP_004179987.1	InterPro IPR005135; KEGG: cyt:cce_3495 phytase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Phytase
YP_004179988.1	KEGG: dan:Dana_GF19228 GF19228 gene product from transcript GF19228-RA; SPTR: GF19228
YP_004179989.1	COGs: COG4864 conserved hypothetical protein; KEGG: plm:Plim_0858 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SigmaW regulon antibacterial
YP_004179990.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001940: IPR001254; KEGG: nhl:Nhal_1160 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family
YP_004179991.1	COGs: COG0305 Replicative DNA helicase; InterPro IPR007694: IPR003593: IPR007693: IPR007692; KEGG: tjr:TherJR_2972 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; SPTR: Replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_004179992.1	COGs: COG0359 Ribosomal protein L9; InterPro IPR020594: IPR020070; KEGG: psl:Psta_2667 ribosomal protein L9; PFAM: Ribosomal protein L9-like; SPTR: Ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_004179993.1	COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: srm:SRM_01478 sodium/alanine symporter; PFAM: sodium:alanine symporter; SPTR: Sodium/alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_004179994.1	InterPro IPR019775: IPR005135; KEGG: ank:AnaeK_2753 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_004179995.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_0675 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_4
YP_004179996.1	InterPro IPR002583; KEGG: psl:Psta_4646 ribosomal protein S20; PFAM: ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_004179997.1	KEGG: psl:Psta_2920 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004179998.1	COGs: COG1262 conserved hypothetical protein; InterPro IPR005532: IPR017806; KEGG: sro:Sros_0331 hypothetical protein; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: conserved hypothetical protein TIGR03440
YP_004179999.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160: IPR015590; KEGG: bts:Btus_0370 succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase
YP_004180000.1	COGs: COG1597 Sphingosine kinase; InterPro IPR001206; KEGG: nhl:Nhal_1571 diacylglycerol kinase catalytic region; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; SPTR: Diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family
YP_004180001.1	KEGG: mav:MAV_2634 cytochrome P450; SPTR: Putative uncharacterized protein
YP_004180002.1	InterPro IPR011682; KEGG: psl:Psta_3607 hypothetical protein; PFAM: glycosyl hydrolase 38 domain protein; SPTR: Putative uncharacterized protein
YP_004180003.1	COGs: COG3132 conserved hypothetical protein; InterPro IPR007432; KEGG: psl:Psta_3246 hypothetical protein; PFAM: protein of unknown function DUF480; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function, DUF480
YP_004180004.1	COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424: IPR011344; KEGG: amu:Amuc_1863 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_004180005.1	COGs: COG0360 Ribosomal protein S6; InterPro IPR020814: IPR000529; KEGG: plm:Plim_2627 ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; SPTR: 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; manually curated; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_004180006.1	COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR001328: IPR018171; KEGG: plm:Plim_2628 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_004180007.1	COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); InterPro IPR001021: IPR020055; KEGG: plm:Plim_2629 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; SPTR: 50S ribosomal protein L25; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form
YP_004180008.1	InterPro IPR000601: IPR002126; KEGG: sro:Sros_4284 hypothetical protein; PFAM: Cadherin; SPTR: Putative uncharacterized protein
YP_004180009.1	COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: csa:Csal_0494 glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; SPTR: Probable D-amino acid oxidase; manually curated; PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO
YP_004180010.1	InterPro IPR017936: IPR000866; KEGG: psl:Psta_2574 redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein; PFAM: AhpC/TSA family
YP_004180011.1	KEGG: mxa:MXAN_7038 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180012.1	KEGG: gvi:glr4062 hypothetical protein; SPTR: Glr4062 protein
YP_004180013.1	KEGG: dpe:Dper_GL23628 GL23628 gene product from transcript GL23628-RA; SPTR: GL23628
YP_004180014.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR004358: IPR003018: IPR003661: IPR 003594; KEGG: sit:TM1040_1854 GAF sensor hybrid histidine kinase; PFAM: histidine kinase A domain protein; GAF domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; GAF domain protein; ATP-binding region ATPase domain protein; SPTR: GAF sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain
YP_004180015.1	COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733: IPR004176; KEGG: plm:Plim_0604 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; Clp domain protein; SPTR: Thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: Clp amino terminal domain; Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_004180016.1	COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: sus:Acid_7250 glutathione peroxidase; PFAM: glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: Glutathione peroxidase; PFAM: Glutathione peroxidase
YP_004180017.1	COGs: COG0845 Membrane-fusion protein; KEGG: rba:RB6978 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004180018.1	InterPro IPR011701; KEGG: mta:Moth_1000 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF894)
YP_004180019.1	COGs: COG4487 conserved hypothetical protein; InterPro IPR019219; KEGG: bbt:BBta_2038 hypothetical protein; PFAM: Protein of unknown function DUF2130; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2130)
YP_004180020.1	KEGG: nml:Namu_0294 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180021.1	InterPro IPR011701; KEGG: psl:Psta_3978 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004180022.1	COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: cag:Cagg_1601 histone deacetylase superfamily; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Histone deacetylase superfamily; PFAM: Histone deacetylase domain
YP_004180023.1	COGs: COG0137 Argininosuccinate synthase; InterPro IPR018223: IPR001518; KEGG: psl:Psta_3843 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_004180024.1	KEGG: dan:Dana_GF17141 GF17141 gene product from transcript GF17141-RA; SPTR: Putative uncharacterized protein
YP_004180025.1	KEGG: nve:NEMVE_v1g144703 hypothetical protein; SPTR: Predicted protein
YP_004180026.1	KEGG: pop:POPTR_549228 hypothetical protein; SPTR: Predicted protein
YP_004180027.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 004358: IPR001610: IPR003661: IPR003594: IPR013656: IPR013655; KEGG: rxy:Rxyl_2663 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004180028.1	InterPro IPR017909; KEGG: psl:Psta_3531 peptidase domain protein; SPTR: Putative uncharacterized protein
YP_004180029.1	COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR009056: IPR001680: IPR 019775: IPR019781; KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C
YP_004180030.1	COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814: IPR004639; KEGG: rba:RB6831 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: aminotransferase class-III; SPTR: Probable glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_004180031.1	COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR020472: IPR001632: IPR 001680: IPR019775: IPR019781; KEGG: cag:Cagg_1814 NB-ARC domain protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: NB-ARC domain protein; PFAM: WD domain, G-beta repeat
YP_004180032.1	InterPro IPR001789; KEGG: cyn:Cyan7425_4416 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain
YP_004180033.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_0697 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180034.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: phe:Phep_1694 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004180035.1	InterPro IPR011449: IPR013424; KEGG: sfl:CP0070 extracellular serine protease SepA; PFAM: protein of unknown function DUF1555; SPTR: Peptidase S1 and S6 chymotrypsin/Hap; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004180036.1	COGs: COG0628 permease; InterPro IPR002549; KEGG: pla:Plav_2158 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF20
YP_004180037.1	COGs: COG0709 Selenophosphate synthase; InterPro IPR000728: IPR010918: IPR004536; KEGG: adg:Adeg_0304 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; SPTR: Selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein
YP_004180038.1	COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; InterPro IPR003837; KEGG: dal:Dalk_4494 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; SPTR: Glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit
YP_004180039.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR004412: IPR020556: IPR000120; KEGG: chy:CHY_1102 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit
YP_004180040.1	COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); InterPro IPR004413: IPR017958: IPR006075: IPR018027; KEGG: psl:Psta_4217 glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit
YP_004180041.1	KEGG: kse:Ksed_11420 putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation); SPTR: Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation)
YP_004180042.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: plm:Plim_1185 tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Integrase/recombinase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_004180043.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170; KEGG: syp:SYNPCC7002_A0033 hypothetical protein; PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_004180044.1	KEGG: rsp:RSP_3995 hypothetical protein; SPTR: Cytochrome c family protein, putative; PFAM: Protein of unknown function (DUF3365)
YP_004180045.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: rba:RB11225 hypothetical protein; SMART: Rhodanese domain protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892); Rhodanese-like domain
YP_004180046.1	KEGG: ana:alr7304 hypothetical protein; SPTR: Alr7304 protein
YP_004180047.1	KEGG: psl:Psta_3808 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180048.1	COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: scl:sce4166 hypothetical protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Exonuclease of the beta-lactamase fold involved in RNA processing; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain
YP_004180049.1	COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KEGG: kfl:Kfla_2116 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; SPTR: Aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3
YP_004180051.1	COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR016132: IPR005467: IPR001789: IPR001294: IPR 003018: IPR003661: IPR003594: IPR013654; KEGG: alv:Alvin_0435 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-2 domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; GAF domain; Phytochrome region; His Kinase A (phosphoacceptor) domain; PAS fold
YP_004180052.1	KEGG: rxy:Rxyl_2987 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088)
YP_004180053.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: nde:NIDE3680 putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE; PFAM: Methyltransferase type 11; SPTR: CalE5; PFAM: Methyltransferase domain
YP_004180054.1	KEGG: act:ACLA_050540 Rho guanyl nucleotide exchange factor, putative; SPTR: Kyphoscoliosis peptidase
YP_004180055.1	KEGG: mar:MAE_56260 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180056.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psl:Psta_4602 sulfatase; PFAM: sulfatase; SPTR: Heparan N-sulfatase; PFAM: Sulfatase
YP_004180057.1	InterPro IPR001915; KEGG: psl:Psta_0022 peptidase M48 Ste24p; PFAM: peptidase M48 Ste24p; SPTR: Peptidase M48 Ste24p; PFAM: Peptidase family M48
YP_004180058.1	KEGG: sus:Acid_7948 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180059.1	KEGG: aba:Acid345_0765 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1326)
YP_004180060.1	KEGG: plm:Plim_3179 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180061.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001940: IPR001254; KEGG: cts:Ctha_2056 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: Similar to serine proteinase HtrA/DegQ/DegS family; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family
YP_004180062.1	COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR007197: IPR004383; KEGG: ade:Adeh_4229 ribosomal RNA large subunit methyltransferase N; PFAM: Radical SAM domain protein; SPTR: Probable RNA methyltransferase Adeh_4229; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family
YP_004180063.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR019734: IPR000719: IPR013026: IPR020635: IPR 002290: IPR008271: IPR017442; KEGG: plm:Plim_3456 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain
YP_004180064.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: plm:Plim_0558 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004180065.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: plm:Plim_0559 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_004180066.1	COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627; KEGG: plm:Plim_1574 peptidase A24A domain protein; PFAM: peptidase A24A domain protein; SPTR: Peptidase A24A domain protein; PFAM: Bacterial Peptidase A24 N-terminal domain
YP_004180067.1	COGs: COG1668 ABC-type Na+ efflux pump permease component; InterPro IPR003675; KEGG: psl:Psta_1550 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family
YP_004180068.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: rba:RB6469 sodium ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Sodium ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_004180069.1	InterPro IPR002645; KEGG: psl:Psta_3468 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Putative uncharacterized protein; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004180070.1	COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR000836: IPR004467; KEGG: psl:Psta_1790 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase
YP_004180071.1	InterPro IPR000551: IPR006158; KEGG: mei:Msip34_1308 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein
YP_004180072.1	KEGG: gob:Gobs_0374 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180073.1	KEGG: tgo:TGME49_023650 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180074.1	KEGG: rno:364996 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae); SPTR: UDP-galactose 4-epimerase
YP_004180075.1	KEGG: aor:AO090001000240 uncharacterized mRNA-associated protein RAP55; SPTR: Putative uncharacterized protein
YP_004180076.1	COGs: COG0400 esterase; InterPro IPR003140; KEGG: psl:Psta_4332 phospholipase/carboxylesterase; PFAM: phospholipase/Carboxylesterase; SPTR: Putative uncharacterized protein; PFAM: Phospholipase/Carboxylesterase
YP_004180077.1	KEGG: gsu:GSU3219 fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein; PFAM: CARDB
YP_004180078.1	COGs: COG0684 Demethylmenaquinone methyltransferase; KEGG: tro:trd_0311 probable transferase protein; SPTR: Probable transferase protein; PFAM: Demethylmenaquinone methyltransferase
YP_004180079.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006140: IPR006139; KEGG: maq:Maqu_3853 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004180080.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR000253: IPR005467: IPR004358: IPR003018: IPR 003594; KEGG: psl:Psta_3175 GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Forkhead-associated protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; Forkhead-associated protein; SPTR: GAF sensor signal transduction histidine kinase; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; FHA domain
YP_004180081.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001940: IPR001254; KEGG: plm:Plim_2772 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SPTR: Peptidase S1C, Do; PFAM: Trypsin
YP_004180082.1	KEGG: plm:Plim_3396 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180083.1	COGs: COG4923 conserved hypothetical protein; KEGG: bph:Bphy_4094 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF429)
YP_004180084.1	COGs: COG0205 6-phosphofructokinase; InterPro IPR000023: IPR012004; KEGG: psl:Psta_0329 diphosphate--fructose-6-phosphate1-phosphotransferase; PFAM: phosphofructokinase; SPTR:Diphosphate--fructose-6-phosphate1-phosphotran sferase; PFAM: Phosphofructokinase
YP_004180085.1	KEGG: psl:Psta_1683 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180086.1	KEGG: rba:RB6539 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: TM2 domain
YP_004180087.1	COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: bav:BAV0862 16S ribosomal RNA methyltransferase RsmE; PFAM: protein of unknown function DUF558; SPTR: Putative uncharacterized protein; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_004180088.1	InterPro IPR002781; KEGG: hau:Haur_3774 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE
YP_004180089.1	KEGG: amd:AMED_8114 hypothetical protein; SPTR: Putative thymidylate kinase
YP_004180090.1	InterPro IPR001845; KEGG: plm:Plim_2033 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family
YP_004180091.1	InterPro IPR001107; KEGG: rba:RB8770 hypothetical protein; PFAM: band 7 protein; SPTR: Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family
YP_004180092.1	InterPro IPR001107; KEGG: psl:Psta_4418 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Band 7 protein; PFAM: SPFH domain / Band 7 family
YP_004180093.1	COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: plm:Plim_2404 ROK family protein; PFAM: ROK family protein; SPTR: ROK family protein; manually curated; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase)
YP_004180094.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR004358: IPR 003661: IPR003594: IPR013767; KEGG: psl:Psta_1412 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004180095.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR011418; KEGG: rba:RB5053 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel
YP_004180096.1	COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR002937; KEGG: cyb:CYB_2788 hypothetical protein; PFAM: amine oxidase; SPTR: Amine oxidase; manually curated; PFAM: Flavin containing amine oxidoreductase
YP_004180097.1	KEGG: bra:BRADO6626 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Copper resistance protein D
YP_004180098.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: psl:Psta_4323 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004180099.1	COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: sin:YN1551_2013 ankyrin; PFAM: Ankyrin; SPTR: Ankyrin; PFAM: Ankyrin repeat
YP_004180100.1	KEGG: ote:Oter_0060 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180101.1	KEGG: psl:Psta_3111 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180102.1	KEGG: mpo:Mpop_5233 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180103.1	KEGG: hha:Hhal_1736 putative ABC transporter; SPTR: Putative ABC transporter
YP_004180104.1	InterPro IPR002917; KEGG: krh:KRH_10290 hypothetical protein; PFAM: GTP-binding protein HSR1-related; SPTR: Putative uncharacterized protein
YP_004180105.1	KEGG: uma:UM06288.1 hypothetical protein; SPTR: High molecular mass nuclear antigen
YP_004180106.1	COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR003593: IPR003959: IPR012763; KEGG: psl:Psta_2525 DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau
YP_004180107.1	COGs: COG0718 conserved hypothetical protein; InterPro IPR004401; KEGG: sat:SYN_00162 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: UPF0133 protein ACA_0728; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family
YP_004180108.1	COGs: COG0353 Recombinational DNA repair protein (RecF pathway); InterPro IPR006154: IPR000093: IPR015967: IPR006171; KEGG: rba:RB6492 recombinant protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein; SPTR: Recombinant protein RecR; TIGRFAM: recombination protein RecR; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_004180109.1	COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394: IPR007046: IPR007634; KEGG: psl:Psta_2523 RNA polymerase, sigma 54 subunit, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor
YP_004180110.1	COGs: COG0335 Ribosomal protein L19; InterPro IPR001857: IPR018257; KEGG: psl:Psta_2263 ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_004180111.1	COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR002649: IPR016009; KEGG: psl:Psta_2262 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; manually curated; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_004180112.1	COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: rba:RB12824 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_004180113.1	COGs: COG0213 Thymidine phosphorylase; InterProIPR017872: IPR017459: IPR000312: IPR013102: IPR 000053: IPR018090; KEGG: ank:AnaeK_0651 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; PRIAM: Thymidine phosphorylase; SPTR: Pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase
YP_004180114.1	COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: llo:LLO_1401 hypothetical protein, SPFH domain/band 7 family; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family
YP_004180115.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: plm:Plim_2346 tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Tyrosine recombinase XerC; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_004180116.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR002078: IPR001789: IPR020441: IPR003593: IPR 002197; KEGG: plm:Plim_1915 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Acetoacetate metabolism regulatory protein ATOC; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004180117.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR001431: IPR011765: IPR007863; KEGG: rmr:Rmar_0089 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_004180118.1	COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932: IPR014045: IPR010822; KEGG: psl:Psta_1567 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; SPTR: Protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C
YP_004180119.1	COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: plm:Plim_0864 molybdopterin biosynthesis MoaE protein; PFAM: molybdopterin biosynthesis MoaE protein; SPTR: Molybdopterin converting factor (Subunit 2); PFAM: MoaE protein
YP_004180120.1	COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterProIPR001995: IPR006638: IPR000385: IPR007197: IPR 010505: IPR013483; KEGG: sus:Acid_6425 GTP cyclohydrolase subunit MoaA; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: GTP cyclohydrolase subunit MoaA; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_004180121.1	InterPro IPR005829: IPR005358; KEGG: rba:RB3283 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153)
YP_004180122.1	KEGG: mxa:MXAN_5569 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180123.1	COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: plm:Plim_1271 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Probable DNA-binding protein HU; PFAM: Bacterial DNA-binding protein
YP_004180124.1	KEGG: rba:RB3280 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180125.1	KEGG: min:Minf_0410 ABC-type transport system involved in gliding motility, permease component; SPTR: ABC-type transport system involved in multi-copper enzyme maturation, permease component
YP_004180126.1	InterPro IPR019196; KEGG: cya:CYA_2880 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Putative uncharacterized protein; PFAM: ABC-type uncharacterized transport system
YP_004180127.1	KEGG: cya:CYA_2879 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180128.1	COGs: COG0221 Inorganic pyrophosphatase; InterPro IPR008162; KEGG: aba:Acid345_3968 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: Inorganic diphosphatase; PFAM: Inorganic pyrophosphatase
YP_004180129.1	COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: bfo:BRAFLDRAFT_68401 hypothetical protein; PFAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase; PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase
YP_004180130.1	KEGG: pen:PSEEN2142 multidrug efflux protein MATE family; SPTR: Putative multidrug efflux protein, MatE family
YP_004180131.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: gau:GAU_1147 secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004180132.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: sth:STH976 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_004180133.1	COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cts:Ctha_0502 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative ABC transporter, permease protein; PFAM: Predicted permease
YP_004180134.1	KEGG: psl:Psta_0043 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180135.1	KEGG: sna:Snas_4818 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180136.1	InterPro IPR000983: IPR001120: IPR012902; KEGG: rba:RB11016 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180137.1	KEGG: npu:Npun_R2919 hemolysin-type calcium-binding region; SPTR: Beta-lactamase, putative; TIGRFAM: actinobacterial surface-anchored protein domain
YP_004180138.1	KEGG: kfl:Kfla_2008 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: actinobacterial surface-anchored protein domain
YP_004180139.1	InterPro IPR006442; KEGG: bxe:Bxe_A2974 signal peptide protein; SPTR: Putative signal peptide protein, TPR domain-containing; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_004180140.1	InterPro IPR000897: IPR012902; KEGG: plm:Plim_3726 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180141.1	KEGG: plm:Plim_3704 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180142.1	KEGG: zma:100285219 xylogen protein 1; SPTR: Non-specific lipid-transfer protein
YP_004180143.1	KEGG: ahe:Arch_0199 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180144.1	COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: cyt:cce_2598 stationary phase survival protein SurE; PFAM: Survival protein SurE; SPTR: Stationary-phase survival protein; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE
YP_004180145.1	COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: npu:Npun_R2832 peptidylprolyl isomerase, FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_004180146.1	KEGG: npu:Npun_R2871 hypothetical protein; SPTR: Phosphoribosylaminoimidazole synthetase
YP_004180147.1	InterPro IPR017937: IPR017936: IPR013740; KEGG: rru:Rru_A0398 thiol-disulfide isomerase and thioredoxins-like; PFAM: Redoxin domain protein; SPTR: Thiol-disulfide isomerase and thioredoxins-like; PFAM: Redoxin
YP_004180148.1	COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: xfa:XF0199 hypothetical protein; PFAM: protein of unknown function DUF502; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF502)
YP_004180149.1	COGs: COG0358 DNA primase; InterProIPR006295: IPR002694: IPR006154: IPR013264: IPR 006171; KEGG: psl:Psta_2694 DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein; SPTR: DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core
YP_004180150.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943: IPR014284: IPR012760: IPR007127: IPR 009042: IPR007627: IPR007624: IPR007630; KEGG: plm:Plim_0214 RNA polymerase sigma factor RpoD; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 factor, region 1.1; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_004180151.1	COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: plm:Plim_0030 protein of unknown function DUF164; PFAM: protein of unknown function DUF164; SPTR: Putative uncharacterized protein; PFAM: Putative zinc ribbon domain
YP_004180152.1	COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480: IPR018481; KEGG: tmt:Tmath_0189 glycosyl transferase, family 4, conserved region; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; PFAM: Glycosyl transferase family 4
YP_004180153.1	COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: rmr:Rmar_1126 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Capsular exopolysaccharide family; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family
YP_004180154.1	KEGG: mxa:MXAN_1052 O-antigen polymerase family protein; SPTR: O-antigen polymerase family protein
YP_004180155.1	KEGG: dan:Dana_GF24314 GF24314 gene product from transcript GF24314-RA; SPTR: Minus agglutinin
YP_004180156.1	InterPro IPR013426: IPR019127; KEGG: dvl:Dvul_3054 eight transmembrane protein EpsH; PFAM: Exosortase EpsH-related; SPTR: Eight transmembrane protein EpsH; TIGRFAM: eight transmembrane protein EpsH; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: eight transmembrane protein EpsH (proposed exosortase)
YP_004180157.1	InterPro IPR014263; KEGG: dba:Dbac_2581 EpsI family protein; SPTR: EpsI family protein; TIGRFAM: EpsI family protein; PFAM: Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein
YP_004180158.1	COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368: IPR001509; KEGG: ath:AT3G51160 MUR1 (MURUS 1); GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase
YP_004180159.1	KEGG: dsh:Dshi_1950 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180160.1	InterPro IPR000390; KEGG: dsa:Desal_0931 small multidrug resistance protein; PFAM: small multidrug resistance protein; SPTR: Small multidrug resistance protein; PFAM: Small Multidrug Resistance protein
YP_004180161.1	InterPro IPR000390; KEGG: dsa:Desal_0931 small multidrug resistance protein; PFAM: small multidrug resistance protein; SPTR: Small multidrug resistance protein; PFAM: Small Multidrug Resistance protein
YP_004180162.1	KEGG: olu:OSTLU_24368 predicted protein; SPTR: Predicted protein
YP_004180163.1	COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: gem:GM21_2012 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004180164.1	COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001252: IPR010945: IPR001557: IPR001236; KEGG: plm:Plim_1133 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; TIGRFAM: malate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase
YP_004180165.1	COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667: IPR003156; KEGG: plm:Plim_0422 phosphoesterase RecJ domain protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Phosphoesterase RecJ domain protein; PFAM: DHHA1 domain; DHH family
YP_004180166.1	COGs: COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog); InterPro IPR004307; KEGG: sti:Sthe_0774 TspO and MBR like protein; PFAM: TspO/MBR family protein; SPTR: TspO and MBR like protein; PFAM: TspO/MBR family
YP_004180167.1	InterPro IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180168.1	KEGG: rrs:RoseRS_2659 glycosyl transferase family protein; SPTR: Membrane protein, putative
YP_004180169.1	COGs: COG1907 sugar kinase; InterPro IPR004422; KEGG: xau:Xaut_3535 beta-ribofuranosylaminobenzene 5'-phosphate synthase; SPTR: Beta-ribofuranosylaminobenzene 5'-phosphate synthase family; TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinases C terminal; TIGRFAM: beta-RFAP synthase
YP_004180170.1	KEGG: pca:Pcar_1313 hypothetical protein; SPTR: TPR repeat-containing protein
YP_004180171.1	KEGG: mca:MCA0776 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180172.1	COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: syx:SynWH7803_2339 peptide deformylase; PFAM: formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_004180173.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002471; KEGG: psl:Psta_0862 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2048)
YP_004180174.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011908: IPR011910: IPR002201; KEGG: plm:Plim_1964 glycosyl transferase family 9; PFAM: glycosyl transferase family 9; SPTR: Heptosyltransferase family protein; TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II
YP_004180175.1	KEGG: mmi:MMAR_4389 proline-rich antigen, Pra; SPTR: Proline-rich antigen, Pra
YP_004180176.1	KEGG: cqu:CpipJ_CPIJ009407 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180177.1	InterPro IPR011031; KEGG: rba:RB11084 response regulator aspartate phosphatase RapC; SPTR: Putative uncharacterized protein
YP_004180178.1	InterPro IPR013517: IPR011519; KEGG: rba:RB11088 hypothetical protein; PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; SPTR: Similar to ASPIC; PFAM: ASPIC and UnbV; FG-GAP repeat
YP_004180179.1	InterPro IPR006311: IPR017909: IPR019546: IPR010869; KEGG: dfe:Dfer_1039 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004180180.1	InterPro IPR011444; KEGG: dfe:Dfer_1040 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004180181.1	KEGG: aga:AgaP_AGAP005366 AGAP005366-PA; SPTR: AGAP005366-PA
YP_004180182.1	KEGG: tcr:506133.61 mucin-associated surface protein (MASP); SPTR: Mucin-associated surface protein (MASP), putative
YP_004180183.1	KEGG: rsq:Rsph17025_2248 elongation factor G; SPTR: Small GTP-binding protein
YP_004180184.1	InterPro IPR011465; KEGG: plm:Plim_3142 protein of unknown function DUF1571; PFAM: protein of unknown function DUF1571; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1571)
YP_004180185.1	KEGG: mxa:MXAN_0053 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180186.1	COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: nde:NIDE2414 hypothetical protein; PFAM: Phosphoglycerate mutase; SPTR: Putative phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA
YP_004180187.1	COGs: COG1834 N-Dimethylarginine dimethylaminohydrolase; InterPro IPR003198; KEGG: psl:Psta_3749 amidinotransferase; PFAM: amidinotransferase; SPTR: Amidinotransferase; PFAM: Amidinotransferase
YP_004180188.1	KEGG: plm:Plim_0886 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180189.1	InterPro IPR000253; KEGG: psl:Psta_2714 pyrrolo-quinoline quinone; PFAM: Forkhead-associated protein; SPTR: Putative uncharacterized protein
YP_004180190.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: psl:Psta_2713 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_004180191.1	KEGG: psl:Psta_2712 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180192.1	COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterProIPR002312: IPR004522: IPR006195: IPR004365: IPR 004364; KEGG: xal:XALc_1738 probable asparaginyl-tRNA synthetase (AsnRS) protein; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Probable asparaginyl-trna synthetase (Asnrs) protein; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase
YP_004180193.1	KEGG: ank:AnaeK_2175 PBS lyase heat domain protein repeat-containing protein; SPTR: Peptidase S1 and S6, chymotrypsin/Hap
YP_004180194.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943: IPR014284: IPR009042: IPR007627: IPR 007624: IPR007630; KEGG: psl:Psta_2413 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004180195.1	InterPro IPR017936: IPR000866; KEGG: nhl:Nhal_2971 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004180196.1	COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680: IPR019782: IPR017986: IPR019781; KEGG: hoh:Hoch_3099 serine/threonine protein kinase with WD40 repeats; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: Serine/threonine protein kinase with WD40 repeats; PFAM: WD domain, G-beta repeat
YP_004180197.1	InterPro IPR009056: IPR011444; KEGG: rba:RB12567 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553)
YP_004180198.1	InterPro IPR006311: IPR017909: IPR010869; KEGG: rba:RB12566 sulfatase; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004180199.1	KEGG: tfu:Tfu_2074 tyrosine protein kinase:serine/threonine protein kinase; SPTR: Tyrosine protein kinase:Serine/threonine protein kinase
YP_004180200.1	KEGG: gox:GOX1607 lipopolysaccharide N-acetylglucosaminyltransferase II; SPTR: Lipopolysaccharide N-acetylglucosaminyltransferase II
YP_004180201.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008271: IPR020635: IPR002290: IPR 000719: IPR017442; KEGG: psl:Psta_4397 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004180202.1	COGs: COG4099 peptidase; InterPro IPR003140; KEGG: rba:RB9546 putative a hydrolase; PFAM: phospholipase/Carboxylesterase; SPTR: Putative uncharacterized protein; PFAM: Dienelactone hydrolase family
YP_004180203.1	InterPro IPR008207; KEGG: hla:Hlac_0527 chromosome segregation protein SMC; SPTR: Chromosome segregation protein SMC; PFAM: Hpt domain
YP_004180204.1	COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR001295: IPR005720: IPR012135; KEGG: rba:RB8748 dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase; PRIAM: Dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein
YP_004180205.1	COGs: COG2935 Putative arginyl-tRNA:protein arginylyltransferase; InterPro IPR017138: IPR007471: IPR007472; KEGG: mxa:MXAN_2360 arginyl-tRNA-protein transferase; PFAM: Arginine-tRNA-protein transferase domain protein; SPTR: Arginine-transferase family protein; PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus
YP_004180206.1	KEGG: psl:Psta_4662 O-antigen polymerase; SPTR: Hemocyanin type 1-like protein; PFAM: O-Antigen ligase
YP_004180207.1	COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: psl:Psta_4663 glycosyl transferase family 4; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Glycosyl transferase family 4; PFAM: Glycosyl transferase family 4
YP_004180208.1	COGs: COG0442 Prolyl-tRNA synthetase; InterProIPR001986: IPR002316: IPR004500: IPR006195: IPR 002314: IPR007214: IPR004154; KEGG: plm:Plim_2498 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; SPTR: Prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II
YP_004180209.1	COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR005882: IPR005835: IPR001451; KEGG: mta:Moth_0075 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; PRIAM: Glucosamine-1-phosphate N-acetyltransferase; SPTR: Bifunctional protein glmU; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_004180210.1	InterPro IPR000182; KEGG: psl:Psta_3252 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family
YP_004180211.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: psl:Psta_2904 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] domain
YP_004180212.1	KEGG: swi:Swit_3100 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180213.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: plm:Plim_0803 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family
YP_004180214.1	InterPro IPR018313; KEGG: dan:Dana_GF15984 GF15984 gene product from transcript GF15984-RA; SPTR: GF15984
YP_004180215.1	COGs: COG0177 EndoIII-related endonuclease; InterProIPR004035: IPR004036: IPR005759: IPR003265: IPR 003651; KEGG: gau:GAU_0535 putative DNA glycosylase/AP lyase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: Putative DNA glycosylase/AP lyase; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III
YP_004180216.1	COGs: COG2802 Uncharacterized protein similar to the N-terminal domain of Lon protease; InterPro IPR003111; KEGG: psl:Psta_2708 peptidase S16 lon domain protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; SPTR: Peptidase S16 lon domain protein; PFAM: ATP-dependent protease La (LON) domain
YP_004180217.1	COGs: COG0302 GTP cyclohydrolase I; InterPro IPR018234: IPR001474: IPR020602; KEGG: psl:Psta_2339 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I; manually curated; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_004180218.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR017900: IPR017896: IPR016166: IPR006094: IPR 001938: IPR004113; KEGG: psl:Psta_2342 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; Thaumatin pathogenesis-related protein; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: D-lactate dehydrogenase (Cytochrome); PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_004180219.1	InterPro IPR010916; KEGG: plm:Plim_3704 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180221.1	KEGG: uma:UM04283.1 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180222.1	KEGG: edi:EDI_046920 GPI mannosyltransferase; SPTR: GPI mannosyltransferase, putative
YP_004180223.1	KEGG: rxy:Rxyl_0756 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180224.1	KEGG: plm:Plim_0161 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559)
YP_004180225.1	KEGG: mcc:719275 similar to piggyBac transposable element derived 5; SPTR: Putative lipoprotein
YP_004180226.1	COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: plm:Plim_3767 ApbE family lipoprotein; PFAM: ApbE family lipoprotein; SPTR: ApbE family lipoprotein; PFAM: ApbE family
YP_004180227.1	KEGG: psl:Psta_2482 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180228.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311: IPR017909: IPR019546: IPR000683; KEGG: plm:Plim_3765 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: Oxidoreductase domain protein; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004180229.1	COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; InterPro IPR013838: IPR001228; KEGG: psl:Psta_2581 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_004180230.1	InterPro IPR010869; KEGG: psl:Psta_2202 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004180231.1	InterPro IPR013216; KEGG: scl:sce3690 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_004180232.1	KEGG: fgr:FG02020.1 hypothetical protein
YP_004180233.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sti:Sthe_0853 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: Methyltransferase domain
YP_004180234.1	KEGG: sus:Acid_7492 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180235.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mar:MAE_59470 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Probable glycosyl transferase; PFAM: Glycosyl transferase family 2
YP_004180236.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: afo:Afer_1817 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004180237.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyc:PCC7424_5786 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004180238.1	COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: adg:Adeg_0074 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004180239.1	COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cyh:Cyan8802_2759 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004180240.1	COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412: IPR013525; KEGG: chl:Chy400_2271 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter
YP_004180241.1	KEGG: plm:Plim_3885 O-antigen polymerase; SPTR: O-antigen polymerase; PFAM: O-Antigen ligase
YP_004180242.1	COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: rce:RC1_4006 succinoglycan biosynthesis transport protein ExoP; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family
YP_004180243.1	InterPro IPR003644; KEGG: ter:Tery_1772 Na-Ca exchanger/integrin-beta4; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Na-Ca exchanger/integrin-beta4; PFAM: Calx-beta domain
YP_004180244.1	COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR020937: IPR011115: IPR000185: IPR014018: IPR 011130; KEGG: rba:RB2013 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SPTR: SecA DEAD domain protein; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain
YP_004180245.1	KEGG: phe:Phep_2880 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180246.1	InterPro IPR006311: IPR017909: IPR001258; KEGG: psl:Psta_2952 NHL repeat containing protein; PFAM: NHL repeat containing protein; SPTR: Twin-arginine translocation pathway signal; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004180247.1	COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: cef:CE3P012 putative restriction system protein; PFAM: restriction endonuclease; SPTR: Putative restriction system protein; PFAM: Restriction endonuclease
YP_004180248.1	KEGG: ecb:100069906 hypothetical LOC100069906; SPTR: Putative uncharacterized protein
YP_004180249.1	KEGG: sus:Acid_6317 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180250.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: sus:Acid_6318 heat shock protein DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Putative uncharacterized protein; PFAM: DnaJ domain
YP_004180251.1	COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR002052: IPR000740; KEGG: nhl:Nhal_2516 GrpE protein; PFAM: GrpE protein; SPTR: Protein grpE; PFAM: GrpE
YP_004180252.1	COGs: COG0443 Molecular chaperone; InterPro IPR018181: IPR001023: IPR013126; KEGG: nhl:Nhal_2517 heat shock protein 70; PFAM: Heat shock protein 70; SPTR: Heat shock protein 70; PFAM: Hsp70 protein
YP_004180253.1	KEGG: azl:AZL_a04590 exonuclease; SPTR: Putative uncharacterized protein
YP_004180254.1	InterPro IPR001120: IPR012902; KEGG: plm:Plim_1627 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180255.1	KEGG: rba:RB220 signal peptide; SPTR: Putative uncharacterized protein
YP_004180256.1	KEGG: sro:Sros_5268 ABC transporter, ATP-binding protein; SPTR: Vegetative cell wall protein gp1
YP_004180257.1	InterPro IPR003400; KEGG: plm:Plim_1698 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_004180258.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: plm:Plim_1697 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_004180259.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: psl:Psta_2717 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Probable TolQ; PFAM: MotA/TolQ/ExbB proton channel family
YP_004180260.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR003594; KEGG: sus:Acid_7798 response regulator receiver protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004180261.1	COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: dau:Daud_1973 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_004180262.1	COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR005875: IPR011761: IPR003135; KEGG: sus:Acid_5043 phosphoribosylaminoimidazole carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein
YP_004180263.1	COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: mxa:MXAN_0190 hypothetical protein; PFAM: Penicillinase repressor; SPTR: Putative uncharacterized protein; PFAM: Penicillinase repressor
YP_004180264.1	InterPro IPR008756; KEGG: sus:Acid_5553 peptidase M56, BlaR1; PFAM: peptidase M56 BlaR1; SPTR: Peptidase M56, BlaR1
YP_004180265.1	COGs: COG0296 1 4-alpha-glucan branching enzyme; InterProIPR006407: IPR006589: IPR004193: IPR006047: IPR 006048; KEGG: azl:AZL_a00400 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; SPTR: 1,4-alpha-glucan-branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
YP_004180266.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: pmt:PMT0414 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: SAM (And some other nucleotide) binding motif; PFAM: Methyltransferase domain
YP_004180267.1	COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042: IPR006076; KEGG: sye:Syncc9902_1340 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: FAD binding domain
YP_004180268.1	COGs: COG3424 naringenin-chalcone synthase; InterPro IPR011141: IPR001099: IPR012328; KEGG: syw:SYNW0993 putative chalcone synthase; PFAM: chalcone and stilbene synthase domain protein; PRIAM: Naringenin-chalcone synthase; SPTR: Chalcone synthase (CHS); PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain
YP_004180269.1	InterPro IPR011031; KEGG: sus:Acid_4315 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180270.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR001949: IPR002023: IPR011538: IPR019554: IPR 019575; KEGG: kfl:Kfla_2118 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_004180271.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR017900: IPR018528: IPR018488: IPR002373: IPR 000595: IPR001041: IPR017896; KEGG: sus:Acid_4310 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; ferredoxin; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain
YP_004180272.1	KEGG: afr:AFE_0361 hypothetical protein; SPTR: Vgr-related protein
YP_004180273.1	COGs: COG0120 Ribose 5-phosphate isomerase; InterPro IPR004788; KEGG: scl:sce1758 ribose-5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase (Phosphoriboisomerase A) (PRI); TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase
YP_004180274.1	KEGG: sus:Acid_4311 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180275.1	InterPro IPR011031; KEGG: sus:Acid_4312 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180276.1	KEGG: srm:SRM_01224 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180277.1	KEGG: hla:Hlac_0734 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180278.1	COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558: IPR004404: IPR000581; KEGG: rxy:Rxyl_1326 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_004180280.1	COGs: COG0102 Ribosomal protein L13; InterPro IPR005823: IPR005822; KEGG: hor:Hore_02460 50S ribosomal protein L13; PFAM: ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_004180281.1	COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: eba:ebA937 30S ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16
YP_004180282.1	COGs: COG0029 Aspartate oxidase; InterPro IPR005288: IPR003953: IPR004112; KEGG: psl:Psta_2205 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: L-aspartate oxidase; SPTR: L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase
YP_004180283.1	KEGG: plm:Plim_2314 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180284.1	InterPro IPR011761; KEGG: bja:bll8229 hypothetical protein; SPTR: D-alanine--D-alanine ligase; PFAM: D-ala D-ala ligase C-terminus
YP_004180285.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sus:Acid_1540 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004180286.1	KEGG: pol:Bpro_5556 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-like; SPTR: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-like
YP_004180287.1	KEGG: mdo:100032383 hypothetical protein LOC100032383; SPTR: Whole genome shotgun sequence assembly, scaffold_59
YP_004180288.1	KEGG: mrb:Mrub_1590 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180289.1	InterPro IPR005135; KEGG: cpc:Cpar_1256 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_004180290.1	InterPro IPR006311: IPR017909: IPR011447; KEGG: plm:Plim_0286 protein of unknown function DUF1552; PFAM: protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552)
YP_004180291.1	InterProIPR009056: IPR013036: IPR013043: IPR013042: IPR 013039; KEGG: plm:Plim_0287 protein of unknown function DUF1592; PFAM: protein of unknown function DUF1588; protein of unknown function DUF1592; protein of unknown function DUF1587; protein of unknown function DUF1595; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1587); Protein of unknown function (DUF1592); Protein of unknown function (DUF1588); Protein of unknown function (DUF1595); Protein of unknown function (DUF1585)
YP_004180292.1	KEGG: rba:RB850 signal peptide; SPTR: Putative uncharacterized protein
YP_004180293.1	KEGG: gob:Gobs_4095 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180294.1	COGs: COG2183 Transcriptional accessory protein; InterPro IPR006641: IPR003029: IPR018974: IPR018316; KEGG: plm:Plim_2413 RNA binding S1 domain protein; PFAM: Tex-like protein-like; Tubulin/FtsZ, 2-layer sandwich domain; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: Ribosomal protein S1-like RNA-binding domain; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_004180295.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: plm:Plim_3659 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC transporter, permease protein; PFAM: Predicted permease
YP_004180296.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: plm:Plim_2328 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004180297.1	COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: syf:Synpcc7942_2354 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_004180298.1	KEGG: plm:Plim_3801 thioredoxin domain protein; SPTR: Thioredoxin domain protein
YP_004180299.1	COGs: COG4760 membrane protein; InterPro IPR010539; KEGG: gym:GYMC10_6220 protein of unknown function DUF1112; SPTR: Putative uncharacterized protein
YP_004180300.1	COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR007085; KEGG: llm:llmg_0544 phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; SPTR: Putative phosphopantothenate--cysteine ligase; manually curated; PFAM: DNA / pantothenate metabolism flavoprotein
YP_004180301.1	COGs: COG4566 Response regulator; InterPro IPR000792: IPR001789; KEGG: alv:Alvin_0640 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004180302.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358: IPR000014: IPR001610: IPR003661: IPR 003594: IPR005467: IPR000700: IPR013656: IPR013655; KEGG: eba:ebA126 two-component sensor kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Two-component sensor kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004180303.1	COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478: IPR008915; KEGG: plm:Plim_3363 peptidase M50; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase M50; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP
YP_004180304.1	COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821: IPR013512: IPR013644; KEGG: hmo:HM1_2264 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_004180305.1	COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: gme:Gmet_2031 sugar transferase; PFAM: sugar transferase; SPTR: Sugar transferase, PEP-CTERM system associated; PFAM: Bacterial sugar transferase
YP_004180306.1	KEGG: plm:Plim_3876 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180307.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: afw:Anae109_2016 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2
YP_004180308.1	COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: scl:sce5074 putative serineacetyltransferase; SPTR: Putative serineacetyltransferase
YP_004180309.1	InterPro IPR002035; KEGG: rrs:RoseRS_2799 von Willebrand factor, type A; SPTR: von Willebrand factor, type A
YP_004180310.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sus:Acid_0271 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1
YP_004180311.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: scl:sce1301 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1
YP_004180312.1	KEGG: fal:FRAAL1778 hypothetical protein; SPTR: Glycosyl transferase family 39
YP_004180313.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: scl:sce0549 glycogen synthase; PFAM: glycosyl transferase group 1; SPTR: Glycogen synthase; PFAM: Glycosyl transferases group 1
YP_004180314.1	COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: scl:sce4697 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/Exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_004180315.1	KEGG: ttu:TERTU_3103 putative type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Putative type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_004180316.1	COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000952: IPR012020; KEGG: psl:Psta_4160 alpha/beta hydrolase fold protein; SPTR: Putative uncharacterized protein
YP_004180317.1	KEGG: psl:Psta_2457 tetratricopeptide TPR_2 repeat protein; SPTR: Putative uncharacterized protein
YP_004180318.1	KEGG: psl:Psta_2457 tetratricopeptide TPR_2 repeat protein; SPTR: Putative uncharacterized protein
YP_004180319.1	KEGG: rpb:RPB_0600 translation initiation factor IF-2; SPTR: Predicted protein
YP_004180320.1	COGs: COG0362 6-phosphogluconate dehydrogenase; InterProIPR006184: IPR006183: IPR006113: IPR006115: IPR 006114; KEGG: cja:CJA_3099 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding; SPTR: 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating
YP_004180321.1	COGs: COG0205 6-phosphofructokinase; InterPro IPR000023: IPR011404; KEGG: psl:Psta_2483 phosphofructokinase; SPTR: Phosphofructokinase; PFAM: Phosphofructokinase
YP_004180322.1	InterPro IPR005834; KEGG: psl:Psta_2485 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Putative uncharacterized protein
YP_004180323.1	KEGG: msm:MSMEG_6143 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180324.1	KEGG: mse:Msed_1428 hydrogenase 4 subunit F; SPTR: Membrane protein-like protein
YP_004180325.1	KEGG: bph:Bphy_4873 major facilitator transporter; SPTR: Major facilitator superfamily MFS_1
YP_004180326.1	COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR003042: IPR004572: IPR002937; KEGG: psl:Psta_4696 protoporphyrinogen oxidase; PFAM: amine oxidase; SPTR: Protoporphyrinogen IX and coproporphyrinogen III oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase
YP_004180327.1	InterPro IPR010496; KEGG: psl:Psta_1370 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative secreted glycosyl hydrolase; PFAM: Domain of Unknown Function (DUF1080)
YP_004180328.1	COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: rba:RB8889 alkaline phosphatase D; PRIAM: Alkaline phosphatase; SPTR: Alkaline phosphatase D (Precursor); PFAM: PhoD-like phosphatase
YP_004180329.1	KEGG: paa:Paes_0150 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180330.1	COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: psl:Psta_4077 Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; SPTR: Na(+)/H(+) antiporter nhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; TC 2.A.33.1.1
YP_004180331.1	InterPro IPR017936: IPR000866; KEGG: psl:Psta_0780 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; AhpC/TSA family
YP_004180332.1	KEGG: sus:Acid_3142 NADP oxidoreductase, coenzyme F420-dependent; SPTR: NADP oxidoreductase coenzyme F420-dependent
YP_004180333.1	KEGG: btk:BT9727_0872 oxidoreductase
YP_004180334.1	KEGG: rca:Rcas_0326 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180335.1	COGs: COG4422 Bacteriophage protein gp37; InterPro IPR011101; KEGG: hoh:Hoch_6140 Gp37Gp68 family protein; PFAM: Gp37Gp68 family protein; SPTR: Phage Gp37Gp68; PFAM: Phage protein Gp37/Gp68
YP_004180336.1	COGs: COG2345 transcriptional regulator protein; InterPro IPR000485: IPR001845; KEGG: plm:Plim_2387 transcriptional regulator protein-like protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory protein, arsR family
YP_004180337.1	COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR017871: IPR010230: IPR003593: IPR003439; KEGG: plm:Plim_2389 FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC
YP_004180338.1	COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231: IPR000825; KEGG: plm:Plim_2390 FeS assembly protein SufB; PFAM: SufBD protein; SPTR: FeS assembly protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB
YP_004180339.1	COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: plm:Plim_2391 FeS assembly protein SufD; PFAM: SufBD protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1
YP_004180340.1	COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001307: IPR001763; KEGG: rmr:Rmar_0983 rhodanese domain protein; PFAM: Rhodanese domain protein; PRIAM: Thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain
YP_004180341.1	COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: rmr:Rmar_0984 Fe-S metabolism associated SufE; PFAM: Fe-S metabolism associated SufE; SPTR: Fe-S metabolism associated SufE; PFAM: Fe-S metabolism associated domain
YP_004180342.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: psl:Psta_4541 protein of unknown function DUF59; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Putative uncharacterized protein; PFAM: Rieske [2Fe-2S] domain
YP_004180343.1	COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: plm:Plim_2392 protein of unknown function DUF59; PFAM: protein of unknown function DUF59; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF59
YP_004180344.1	COGs: COG0205 6-phosphofructokinase; InterPro IPR015912: IPR000023: IPR012003; KEGG: plm:Plim_0062 6-phosphofructokinase; PFAM: phosphofructokinase; SPTR: 6-phosphofructokinase; PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase
YP_004180345.1	KEGG: gym:GYMC10_5186 periplasmic binding protein; SPTR: Periplasmic binding protein
YP_004180346.1	InterPro IPR001120: IPR012902; KEGG: psl:Psta_2737 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180348.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: plm:Plim_0551 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel
YP_004180349.1	KEGG: caa:Caka_2237 TonB family protein; SPTR: Putative uncharacterized protein
YP_004180350.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR017871: IPR003593: IPR003439: IPR017940; KEGG: psl:Psta_2756 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Probable toxin secretion ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_004180351.1	InterPro IPR000089; KEGG: mfa:Mfla_2222 secretion protein HlyD; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Secretion protein HlyD
YP_004180352.1	COGs: COG1538 Outer membrane protein; KEGG: plm:Plim_2028 outer membrane protein-like protein; SPTR: Outer membrane protein-like protein; PFAM: Outer membrane efflux protein
YP_004180353.1	COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495: IPR011629; KEGG: rrs:RoseRS_3105 cobalamin synthesis protein, P47K; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SPTR: Cobalamin synthesis protein, P47K; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain
YP_004180354.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: gvi:glr3104 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Glr3104 protein; PFAM: ABC transporter
YP_004180355.1	COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: gvi:glr3106 hypothetical protein; SPTR: Glr3106 protein; PFAM: Domain of unknown function (DUF3526)
YP_004180356.1	COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: gvi:glr3105 hypothetical protein; SPTR: Glr3105 protein; PFAM: Domain of unknown function (DUF3526)
YP_004180357.1	InterPro IPR019734; KEGG: afw:Anae109_3930 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004180358.1	InterPro IPR019613; KEGG: dsa:Desal_0970 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region
YP_004180359.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008271: IPR020635: IPR002290: IPR 000719: IPR017442; KEGG: ttj:TTHA1594 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004180360.1	InterPro IPR006162: IPR019734: IPR013026; KEGG: cag:Cagg_0357 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004180361.1	KEGG: pmc:P9515_02701 isoleucyl-tRNA synthetase
YP_004180362.1	InterPro IPR018511: IPR018512: IPR001343; KEGG: swp:swp_1383 hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding region; SPTR: Type I secretion target GGXGXDXXX repeat protein domain protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies)
YP_004180363.1	KEGG: shl:Shal_1981 histidine kinase; SPTR: Histidine kinase
YP_004180364.1	InterPro IPR011576; KEGG: srm:SRM_01614 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase
YP_004180365.1	InterPro IPR022272; KEGG: tro:trd_1637 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180366.1	KEGG: psl:Psta_0986 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180367.1	KEGG: plm:Plim_3837 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180368.1	KEGG: smd:Smed_1270 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180369.1	COGs: COG2045 Phosphosulfolactate phosphohydrolase; InterPro IPR005238; KEGG: psl:Psta_4363 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulfolactate phosphatase; SPTR: 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulpholactate phosphatase
YP_004180370.1	COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002315: IPR006195: IPR002314: IPR004154; KEGG: psl:Psta_4364 glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; SPTR: Glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type
YP_004180371.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: psl:Psta_4365 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel
YP_004180372.1	KEGG: mma:MM_3154 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180373.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008271: IPR020635: IPR002290: IPR 000719: IPR017442; KEGG: psl:Psta_2856 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine-protein kinase pknB; PFAM: Protein kinase domain
YP_004180374.1	KEGG: eca:ECA3007 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180375.1	KEGG: mar:MAE_47620 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dynamin family
YP_004180376.1	COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: oca:OCAR_5427 camphor resistance protein CrcB; PFAM: Camphor resistance CrcB protein; SPTR: CrcB protein; TIGRFAM: CrcB protein; PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_004180377.1	InterPro IPR001173; KEGG: ele:Elen_0843 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004180378.1	InterPro IPR010905; KEGG: psl:Psta_0036 glycosyl hydrolase family 88; PFAM: glycosyl hydrolase family 88; SPTR: Glucuronyl hydrolase, putative; PFAM: Glycosyl Hydrolase Family 88
YP_004180379.1	COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: psl:Psta_1948 maf protein; PFAM: Maf family protein; SPTR: Maf protein; TIGRFAM: maf protein; PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_004180380.1	COGs: COG0591 Na+/proline symporter; InterPro IPR019900: IPR001734; KEGG: rba:RB7512 putative integral membrane transport protein; PFAM: Na+/solute symporter; SPTR: Putative integral membrane transport protein; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family
YP_004180381.1	COGs: COG3876 conserved hypothetical protein; InterPro IPR001466: IPR008302; KEGG: aba:Acid345_2615 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; beta-lactamase; SPTR: Uncharacterised conserved protein UCP016719; PFAM: Beta-lactamase; Protein of unknown function (DUF1343)
YP_004180382.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358: IPR000014: IPR001610: IPR003661: IPR 003594: IPR001789: IPR005467: IPR000700: IPR008207: IPR013767; KEGG: psl:Psta_1412 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004180383.1	COGs: COG1482 Phosphomannose isomerase; InterPro IPR001917: IPR001250: IPR014628; KEGG: psl:Psta_4651 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: Mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I
YP_004180384.1	KEGG: psl:Psta_3030 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180385.1	COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205: IPR006691; KEGG: srm:SRM_01676 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller
YP_004180386.1	COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR018522: IPR001241: IPR000565: IPR003594: IPR 013506: IPR006171: IPR002288; KEGG: scl:sce4452 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: DNA gyrase subunit B; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus
YP_004180387.1	InterPro IPR018247; KEGG: mmy:MSC_0523 hypothetical protein; SPTR: Conserved hypothetical transmembrane protein
YP_004180388.1	KEGG: nha:Nham_2630 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2029)
YP_004180389.1	COGs: COG1398 Fatty-acid desaturase; InterPro IPR015876: IPR005804; KEGG: tel:tll1719 acyl-CoA desaturase 2; PFAM: fatty acid desaturase; PRIAM: Stearoyl-CoA 9-desaturase; SPTR: Acyl-CoA desaturase 2; PFAM: Fatty acid desaturase
YP_004180390.1	COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR001327; KEGG: chl:Chy400_0036 alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like domain
YP_004180391.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683; KEGG: zpr:ZPR_3683 putative dehydrogenase and relate protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004180392.1	InterPro IPR012577; KEGG: psl:Psta_4030 NIPSNAP family containing protein; PFAM: NIPSNAP family containing protein; SPTR: NIPSNAP family containing protein; PFAM: NIPSNAP
YP_004180393.1	COGs: COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system; InterPro IPR012393: IPR005151: IPR011659; KEGG: hoh:Hoch_5294 peptidase S41; PFAM: peptidase S41; WD40-like beta Propeller containing protein; SMART: peptidase S41; SPTR: Peptidase S41; PFAM: WD40-like Beta Propeller Repeat; Peptidase family S41
YP_004180394.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358: IPR003661: IPR003594: IPR001789: IPR 005467: IPR011110; KEGG: cya:CYA_1657 sensory box histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: Sensory box histidine kinase/response regulator; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain
YP_004180395.1	KEGG: psl:Psta_2331 MFS transporter xanthine/uracil permease; SPTR: MFS transporter xanthine/uracil permease
YP_004180396.1	KEGG: cat:CA2559_03365 glutamyl-tRNA synthetase; SPTR: Putative uncharacterized protein
YP_004180397.1	COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: plm:Plim_2611 biotin/lipoate A/B protein ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: Probable lipoate-protein ligase A-like protein; PFAM: Biotin/lipoate A/B protein ligase family
YP_004180398.1	KEGG: psl:Psta_4143 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180399.1	COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR000620; KEGG: psl:Psta_0081 protein of unknown function DUF6 transmembrane; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_004180400.1	InterPro IPR011637; KEGG: rba:RB7151 hypothetical protein; PFAM: DoxX family protein; SPTR: Putative uncharacterized protein; PFAM: DoxX
YP_004180401.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639: IPR000073; KEGG: ttr:Tter_0115 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold
YP_004180402.1	COGs: COG1945 conserved hypothetical protein; InterPro IPR002724; KEGG: aca:ACP_1744 pyruvoyl-dependent arginine decarboxylase; PFAM: Pyruvoyl-dependent arginine decarboxylase; PRIAM: Arginine decarboxylase; SPTR: Arginine decarboxylase, pyruvoyl-dependent; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent
YP_004180403.1	KEGG: psl:Psta_4708 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180404.1	COGs: COG0514 Superfamily II DNA helicase; InterProIPR018329: IPR014001: IPR001650: IPR014021: IPR 011545: IPR018982; KEGG: psl:Psta_2965 ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; RQC domain; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; RQC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family
YP_004180405.1	COGs: COG0863 DNA modification methylase; InterPro IPR002052: IPR002295: IPR002941; KEGG: rrs:RoseRS_0124 site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase N-4/N-6 domain protein; SPTR: Site-specific DNA-methyltransferase (Adenine-specific); PFAM: DNA methylase
YP_004180406.1	COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR018394: IPR002081: IPR005101; KEGG: chl:Chy400_0772 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; SPTR: Deoxyribodipyrimidine photo-lyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase
YP_004180407.1	InterPro IPR013424; KEGG: aga:AgaP_AGAP003607 AGAP003607-PA; SPTR: AGAP003607-PA; PFAM: FG-GAP repeat
YP_004180408.1	InterPro IPR000834; KEGG: sus:Acid_1533 peptidase M14, carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SPTR: Peptidase M14, carboxypeptidase A; PFAM: Zinc carboxypeptidase
YP_004180409.1	KEGG: aag:AaeL_AAEL003359 dual specificity mitogen-activated protein kinase kinase hemipterous MAPKK; SPTR: Dual specificity mitogen-activated protein kinase kinase hemipterous MAPKK
YP_004180410.1	COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR019822: IPR002033; KEGG: plm:Plim_2680 sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; SPTR: Sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC
YP_004180411.1	COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR003043: IPR006366: IPR000878: IPR003754; KEGG: gme:Gmet_3235 uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_004180412.1	COGs: COG2503 secreted acid phosphatase; InterPro IPR005519; KEGG: nde:NIDE2215 putative acid phosphatase, class B; PFAM: acid phosphatase (Class B); SPTR: Acid phosphatase; PFAM: HAD superfamily, subfamily IIIB (Acid phosphatase); TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family
YP_004180413.1	COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: plm:Plim_0780 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Sugar ABC transporter permease protein; PFAM: Branched-chain amino acid transport system / permease component
YP_004180414.1	COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439: IPR015861; KEGG: scl:sce4029 ribose ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Sugar (D-ribose) ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_004180415.1	COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: plm:Plim_0778 ribose ABC transporter periplasmic-binding protein; SPTR: ABC transporter sugar-binding protein
YP_004180416.1	InterPro IPR006342; KEGG: rba:RB2498 putative methyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: methyltransferase FkbM family; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: methyltransferase, FkbM family
YP_004180417.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: hha:Hhal_1513 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1
YP_004180418.1	COGs: COG1446 Asparaginase; InterPro IPR006311: IPR017909: IPR000246; KEGG: srm:SRM_02869 asparaginase; PFAM: peptidase T2 asparaginase 2; PRIAM:N(4)-(beta-N-acetylglucosaminyl)-L-asparagina se; SPTR: Asparaginase; PFAM: Asparaginase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004180419.1	InterPro IPR004155: IPR000357; KEGG: psl:Psta_2942 PBS lyase heat domain protein repeat-containing protein; PFAM: HEAT domain containing protein; SPTR: PBS lyase HEAT domain protein repeat-containing protein; PFAM: HEAT repeat
YP_004180420.1	COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR000432: IPR005747: IPR007696; KEGG: cag:Cagg_1710 MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: MutS2 protein; PFAM: MutS domain V; TIGRFAM: MutS2 family protein
YP_004180421.1	COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR017900: IPR017896: IPR013542; KEGG: psl:Psta_2479 domain of unknown function DUF1730; PFAM: domain of unknown function DUF1730; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative
YP_004180422.1	COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR004620: IPR003171; KEGG: pca:Pcar_1732 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form
YP_004180423.1	COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: bts:Btus_2687 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_004180424.1	KEGG: fre:Franean1_5104 peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase
YP_004180425.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR020635: IPR002290: IPR000719: IPR 017442; KEGG: psl:Psta_4559 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004180426.1	KEGG: plm:Plim_3809 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180427.1	KEGG: psl:Psta_4185 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180428.1	KEGG: rba:RB12544 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase
YP_004180429.1	InterPro IPR014284: IPR007627; KEGG: rba:RB7926 hypothetical protein; PFAM: sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004180430.1	KEGG: mxa:MXAN_6434 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180431.1	COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR004733: IPR000728: IPR010918; KEGG: psl:Psta_2161 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_004180432.1	KEGG: gga:768534 hypothetical protein LOC768534; SPTR: Putative uncharacterized protein
YP_004180433.1	KEGG: amu:Amuc_0243 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180434.1	InterPro IPR003689; KEGG: psl:Psta_1336 zinc/iron permease; PFAM: zinc/iron permease; SPTR: Metal cation transporter, ZIP family; PFAM: ZIP Zinc transporter
YP_004180435.1	COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: plm:Plim_1792 S-adenosylmethionine/tRNA-ribosyltransferase-isom erase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine/tRNA-ribosyltransferase-isom erase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_004180436.1	COGs: COG0178 Excinuclease ATPase subunit; InterProIPR001412: IPR017871: IPR004602: IPR003593: IPR 003439; KEGG: psl:Psta_1575 excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_004180437.1	InterPro IPR002035; KEGG: plm:Plim_3001 von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: Sec23/Sec24 trunk domain
YP_004180438.1	KEGG: ank:AnaeK_3746 response regulator receiver protein; SPTR: Excinuclease ABC subunit A
YP_004180439.1	InterPro IPR003400; KEGG: mca:MCA0632 biopolymer ExbD/TolR family transporter; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein, ExbD/TolR family; PFAM: Biopolymer transport protein ExbD/TolR
YP_004180440.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: plm:Plim_3761 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_004180441.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: plm:Plim_3807 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Probable tolQ protein; PFAM: MotA/TolQ/ExbB proton channel family
YP_004180442.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sus:Acid_1655 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease
YP_004180443.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: nhl:Nhal_1201 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease
YP_004180444.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: ppd:Ppro_1984 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004180445.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: geo:Geob_2354 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004180446.1	COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: bba:Bd0029 subtilase; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Cna protein B-type domain; PFAM: Subtilase family
YP_004180447.1	InterPro IPR012902: IPR018062: IPR001120; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180448.1	KEGG: scb:SCAB_89231 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180449.1	KEGG: tva:TVAG_449290 trichohyalin; SPTR: Trichohyalin, putative
YP_004180450.1	COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR017798: IPR000581: IPR020558; KEGG: psl:Psta_2493 dehydratase, YjhG/YagF family; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dehydratase, YjhG/YagF family; TIGRFAM: dehydratase, YjhG/YagF family; PFAM: Dehydratase family; TIGRFAM: probable dehydratase, YjhG/YagF family
YP_004180451.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: rba:RB10858 oxidoreductase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004180452.1	COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: bge:BC1002_5469 peptidase M48 Ste24p; PFAM: peptidase M48 Ste24p; SPTR: Peptidase M48 Ste24p; PFAM: Peptidase family M48
YP_004180453.1	COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: dol:Dole_1528 LemA family protein; PFAM: LemA family protein; SPTR: LemA family protein; PFAM: LemA family
YP_004180454.1	COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); InterPro IPR000515: IPR007210; KEGG: cse:Cseg_3334 glycine betaine ABC transporter substrate-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; SPTR: Substrate-binding region of ABC-type glycine betaine transport system; PFAM: Binding-protein-dependent transport system inner membrane component; Substrate binding domain of ABC-type glycine betaine transport system
YP_004180455.1	COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: hoh:Hoch_5204 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004180456.1	InterPro IPR004155; KEGG: rrs:RoseRS_1736 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: PBS lyase HEAT domain protein repeat-containing protein
YP_004180457.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764: IPR001036; KEGG: psl:Psta_2288 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_004180458.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mca:MCA1596 HlyD family multidrug efflux protein; PFAM: secretion protein HlyD family protein; SPTR: Acriflavine resistance protein A (Precursor); TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004180460.1	InterPro IPR006626; KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; SPTR: Integrin alpha chain
YP_004180461.1	COGs: COG1797 Cobyrinic acid a c-diamide synthase; InterPro IPR017929: IPR011698; KEGG: psl:Psta_3042 CobB/CobQ domain protein glutamine amidotransferase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; SPTR: CobB/CobQ domain protein glutamine amidotransferase; PFAM: CobB/CobQ-like glutamine amidotransferase domain
YP_004180462.1	KEGG: psl:Psta_2105 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180463.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: psl:Psta_4044 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004180464.1	COGs: COG0505 Carbamoylphosphate synthase small subunit; InterProIPR006274: IPR017926: IPR002474: IPR000991: IPR 001317: IPR011702; KEGG: psl:Psta_4606 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; SPTR: Carbamoyl-phosphate synthase, small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_004180465.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311: IPR017909: IPR000683; KEGG: sli:Slin_6215 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Probable NADH-dependent dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_004180466.1	KEGG: amr:AM1_0645 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180467.1	InterPro IPR019734: IPR013026: IPR011519; KEGG: ote:Oter_2945 TPR repeat-containing protein; PFAM: ASPIC/UnbV domain protein; SPTR: TPR repeat-containing protein; PFAM: ASPIC and UnbV
YP_004180468.1	COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: ote:Oter_2944 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase
YP_004180469.1	InterPro IPR013026; KEGG: rca:Rcas_0215 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004180470.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: plm:Plim_2182 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine-protein kinase pknB; PFAM: Protein kinase domain
YP_004180471.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347: IPR020904; KEGG: dfe:Dfer_4758 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004180472.1	KEGG: pfr:PFREUD_16470 3-demethylubiquinone-9 3-O-methyltransferase; SPTR: Putative uncharacterized protein
YP_004180473.1	COGs: COG0433 ATPase; InterPro IPR003593; KEGG: sat:SYN_01844 putative cytoplasmic protein; SMART: AAA ATPase; SPTR: Hypothetical cytosolic protein; PFAM: Domain of unknown function DUF87
YP_004180474.1	InterPro IPR018977; KEGG: sat:SYN_01845 putative cytoplasmic protein; PFAM: NurA domain; SPTR: Hypothetical cytosolic protein; PFAM: NurA domain
YP_004180475.1	KEGG: pth:PTH_0156 hypothetical protein; SPTR: Hypothetical membrane protein
YP_004180476.1	KEGG: scl:sce1944 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180478.1	COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease
YP_004180479.1	KEGG: rba:RB940 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180480.1	COGs: COG1483 ATPase (AAA+ superfamily); KEGG: sme:SMc02155 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF499)
YP_004180481.1	KEGG: mar:MAE_40430 hypothetical protein; SPTR: Genome sequencing data, contig C279; PFAM: Protein of unknown function DUF82
YP_004180482.1	COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: cyc:PCC7424_3561 protein of unknown function DUF433; PFAM: protein of unknown function DUF433; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF433)
YP_004180483.1	COGs: COG1743 Adenine-specific DNA methylase containing a Zn-ribbon; InterPro IPR009537: IPR012327; KEGG: sme:SMc02154 hypothetical protein; PFAM: protein of unknown function DUF1156; D12 class N6 adenine-specific DNA methyltransferase; SPTR: Putative uncharacterized protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase; Transposase IS200 like; Protein of unknown function (DUF1156)
YP_004180484.1	COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014021: IPR001650: IPR000330: IPR014001; KEGG: sme:SMc02152 putative helicase protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: Helicase-DNA-binding protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain
YP_004180485.1	InterPro IPR006935: IPR014001; KEGG: aeh:Mlg_1542 DEAD/DEAH box helicase domain-containing protein; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Type III restriction enzyme, res subunit
YP_004180486.1	COGs: COG2189 Adenine specific DNA methylase Mod; InterPro IPR002941: IPR002295: IPR002052: IPR016059; KEGG: aeh:Mlg_1539 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase
YP_004180487.1	COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014021: IPR001650: IPR000330: IPR014001; KEGG: aeh:Mlg_1538 helicase domain-containing protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain
YP_004180488.1	InterPro IPR014284: IPR007627; KEGG: zpr:ZPR_2352 RNA polymerase ECF-type sigma factor; PFAM: sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor/ECF subfamily (Sigma-70); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004180489.1	COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: psl:Psta_2445 carbon storage regulator, CsrA; PFAM: carbon storage regulator; SPTR: Probable carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_004180490.1	COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286: IPR002818; KEGG: scb:SCAB_55411 putative ThiJ/PfpI family protein; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Protease; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_004180491.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439: IPR017940: IPR001140: IPR017871: IPR 003593; KEGG: bpt:Bpet1862 putative ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Putative ABC transporter; PFAM: ABC transporter transmembrane region; ABC transporter; Domain of unknown function (DUF1854)
YP_004180492.1	KEGG: aae:aq_1182 flagellar M-ring protein; SPTR: Flagellar M-ring protein
YP_004180493.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: psl:Psta_0094 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004180494.1	COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR014045: IPR001932; KEGG: plm:Plim_2397 phosphoprotein phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: Protein phosphatase; PFAM: Protein phosphatase 2C
YP_004180495.1	COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: plm:Plim_1970 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004180496.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: psl:Psta_1688 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; PRIAM: processing peptidase; SPTR: Hypothetical zinc protease; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_004180497.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863: IPR001431; KEGG: psl:Psta_0353 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_004180498.1	COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterPro IPR001343: IPR018512: IPR018511; KEGG: swp:swp_1383 hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding region; SPTR: Type I secretion target repeat protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies)
YP_004180499.1	KEGG: mka:MK0690 SMC1-family ATPase; SPTR: DNA double-strand break repair rad50 ATPase
YP_004180500.1	KEGG: mba:Mbar_A3153 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180501.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_1302 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180502.1	InterPro IPR005829; KEGG: HOXD3; homeobox D3; SPTR: Homeobox protein Hox-D3
YP_004180503.1	InterPro IPR012902: IPR001120; KEGG: psl:Psta_0327 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180504.1	KEGG: scb:SCAB_27131 putative membrane-associated oxidoreductase; SPTR: Putative membrane-associated oxidoreductase
YP_004180505.1	KEGG: hha:Hhal_0926 carbohydrate kinase, FGGY; SPTR: Cell division-related protein
YP_004180506.1	COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterPro IPR003170: IPR016166: IPR006094: IPR011601; KEGG: plm:Plim_0011 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_004180507.1	KEGG: psl:Psta_2947 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180508.1	KEGG: mxa:MXAN_6434 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180509.1	COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: psl:Psta_4168 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; SPTR: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_004180510.1	COGs: COG2006 conserved hypothetical protein; InterPro IPR006311: IPR017909; KEGG: dma:DMR_13230 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004180511.1	InterPro IPR020904; KEGG: psl:Psta_0506 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180512.1	InterPro IPR018247; KEGG: hwa:HQ1193A cell surface glycoprotein; SPTR: Probable cell surface glycoprotein; PFAM: Subtilase family
YP_004180513.1	KEGG: rba:RB10483 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467)
YP_004180514.1	KEGG: psl:Psta_2769 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180515.1	InterPro IPR011447; KEGG: psl:Psta_2274 protein of unknown function DUF1552; PFAM: protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552)
YP_004180516.1	InterPro IPR009056: IPR013042: IPR013039: IPR011658; KEGG: psl:Psta_2273 protein of unknown function DUF1588; PFAM: protein of unknown function DUF1592; protein of unknown function DUF1588; SMART: PA14 domain protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1588); Protein of unknown function (DUF1592); Protein of unknown function (DUF1595); PA14 domain
YP_004180517.1	InterPro IPR001383; KEGG: psl:Psta_4214 ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_004180518.1	KEGG: rba:RB6430 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180519.1	KEGG: mbr:MONBRDRAFT_26897 hypothetical protein; SPTR: Predicted protein
YP_004180520.1	InterPro IPR011701: IPR005829; KEGG: sus:Acid_2635 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Sugar (and other) transporter
YP_004180521.1	COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR006311: IPR017909: IPR001395: IPR020471; KEGG: dma:DMR_27570 aldo/keto reductase family protein; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family
YP_004180522.1	COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: nam:NAMH_0494 carbon storage regulator; PFAM: carbon storage regulator; SPTR: Carbon storage regulator homolog; TIGRFAM: carbon storage regulator; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_004180523.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: alv:Alvin_2513 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Response regulator receiver domain
YP_004180524.1	COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR006070: IPR017867: IPR000106; KEGG: plm:Plim_2592 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SUA5/yciO/yrdC domain; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein-tyrosine phosphatase, low molecular weight; PFAM: Low molecular weight phosphotyrosine protein phosphatase; yrdC domain
YP_004180525.1	KEGG: plm:Plim_0576 protein of unknown function DUF493; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF493)
YP_004180527.1	COGs: COG0689 RNase PH; InterPro IPR002381: IPR001247: IPR015847: IPR018336; KEGG: bac:BamMC406_0869 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
YP_004180528.1	KEGG: psl:Psta_2078 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180529.1	COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR002637: IPR020922; KEGG: rba:RB5134 xanthosine triphosphate pyrophosphatase; PFAM: Ham1 family protein; PRIAM: Nucleoside-triphosphatase; SPTR: Nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_004180530.1	InterPro IPR003006: IPR016130; KEGG: sno:Snov_2228 protein tyrosine/serine phosphatase; SPTR: Protein tyrosine/serine phosphatase; PFAM: Dual specificity phosphatase, catalytic domain
YP_004180531.1	InterPro IPR016130; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180532.1	COGs: COG2107 periplasmic solute-binding protein; KEGG: plm:Plim_1988 protein of unknown function DUF191; SPTR: Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178)
YP_004180533.1	KEGG: plm:Plim_3751 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180534.1	InterPro IPR022272; KEGG: psl:Psta_2388 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180535.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: psl:Psta_2389 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004180536.1	KEGG: tpe:Tpen_0749 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180537.1	COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterProIPR006221: IPR017926: IPR000991: IPR006220: IPR 011702: IPR001317; KEGG: rba:RB6300 anthranilate synthase component II (glutamine amido-transferase); PFAM: glutamine amidotransferase class-I; SPTR: Glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
YP_004180538.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterProIPR020817: IPR005110: IPR001453: IPR005111: IPR 008284; KEGG: psl:Psta_2706 molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; SPTR: Molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_004180539.1	COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR004563: IPR003010; KEGG: plm:Plim_3232 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_004180540.1	COGs: COG0593 ATPase involved in DNA replication initiation; InterPro IPR013317: IPR013159; KEGG: cwo:Cwoe_0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; SPTR: Chromosomal replication initiator protein dnaA; PFAM: domain; Bacterial dnaA protein
YP_004180541.1	InterPro IPR004843; KEGG: psl:Psta_1609 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase
YP_004180542.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR017871: IPR003593; KEGG: psl:Psta_4055 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter
YP_004180543.1	KEGG: ure:UREG_02925 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180544.1	KEGG: plm:Plim_3927 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180545.1	COGs: COG5309 Exo-beta-1 3-glucanase; KEGG: pla:Plav_0507 exo-beta-1 3-glucanase-like protein; SPTR: Exo-beta-1 3-glucanase-like protein
YP_004180546.1	COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484: IPR018485; KEGG: psl:Psta_3010 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Carbohydrate kinase FGGY; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase
YP_004180547.1	InterPro IPR013424: IPR011449; KEGG: ava:Ava_4160 VCBS; PFAM: protein of unknown function DUF1555; SPTR: VCBS; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004180548.1	COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: rba:RB531 iron (III) transport system (iron (III)-binding protein); PFAM: extracellular solute-binding protein family 1; SPTR: Iron (III) transport system (Iron (III)-binding protein); PFAM: Bacterial extracellular solute-binding protein
YP_004180549.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: rba:RB5593 serine/threonine-protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine-protein kinase; PFAM: Protein kinase domain
YP_004180550.1	InterPro IPR000326: IPR018247: IPR005829; KEGG: nmu:Nmul_A0927 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SPTR: Phosphoesterase, PA-phosphatase related; PFAM: PAP2 superfamily
YP_004180551.1	COGs: COG4102 conserved hypothetical protein; InterPro IPR006311: IPR017909: IPR010869; KEGG: psl:Psta_1944 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004180552.1	KEGG: bbt:BBta_2238 putative outer membrane autotransporter protein; SPTR: Eukaryotic translation initiation factor 4H
YP_004180553.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: plm:Plim_1622 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004180554.1	COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: psl:Psta_3967 binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004180555.1	KEGG: ttu:TERTU_1014 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_004180556.1	KEGG: hwa:HQ1193A cell surface glycoprotein; SPTR: Proline rich protein
YP_004180557.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_1714 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004180558.1	KEGG: hth:HTH_0204 permease of the major facilitator superfamily; SPTR: Permease of the major facilitator superfamily
YP_004180559.1	COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268: IPR006218; KEGG: ank:AnaeK_4176 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_004180560.1	InterPro IPR012902; KEGG: rba:RB11015 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559)
YP_004180561.1	KEGG: psl:Psta_2111 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180562.1	COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: psl:Psta_4202 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein
YP_004180563.1	KEGG: plm:Plim_1250 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180564.1	InterPro IPR007263: IPR011020; KEGG: psl:Psta_2891 HTTM domain protein; PFAM: thiol-disulphide oxidoreductase DCC; SMART: HTTM domain protein; SPTR: Putative uncharacterized protein; PFAM: Vitamin K-dependent gamma-carboxylase; Protein of unknown function, DUF393
YP_004180565.1	KEGG: psl:Psta_2892 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180566.1	KEGG: mmu:77215 keratin associated protein 5-3; SPTR: Putative uncharacterized protein ENSMUSP00000081452
YP_004180567.1	COGs: COG1171 Threonine dehydratase; InterPro IPR001926: IPR000634; KEGG: scl:sce3847 putative serine/threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Putative serine/threonine dehydratase; PFAM: Pyridoxal-phosphate dependent enzyme
YP_004180568.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_0239 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_004180569.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: psl:Psta_0270 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004180570.1	KEGG: rba:RB5401 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180571.1	InterPro IPR013424: IPR011449; KEGG: ote:Oter_3893 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_004180572.1	COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: psl:Psta_3779 Mn2+ and Fe2+ transporter of the NRAMP family-like protein; SPTR: Mn2+ and Fe2+ transporter of the NRAMP family-like protein; PFAM: Natural resistance-associated macrophage protein
YP_004180573.1	KEGG: rba:RB6221 signal peptide; SPTR: Putative uncharacterized protein
YP_004180574.1	COGs: COG3869 Arginine kinase; InterPro IPR000749; KEGG: plm:Plim_0763 ATP:guanido phosphotransferase; PFAM: ATP:guanido phosphotransferase; SPTR: Putative ATP:guanido phosphotransferase; PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain
YP_004180575.1	COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; KEGG: psl:Psta_3830 UvrB/UvrC protein; SPTR: UvrB/UvrC protein
YP_004180576.1	COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; InterPro IPR001943; KEGG: psl:Psta_3830 UvrB/UvrC protein; PFAM: UvrB/UvrC protein; SPTR: UvrB/UvrC protein; PFAM: UvrB/uvrC motif
YP_004180577.1	COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; InterProIPR012754: IPR007080: IPR000722: IPR007066: IPR 007083: IPR007081: IPR006592; KEGG: plm:Plim_0472 DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_004180578.1	KEGG: phu:Phum_PHUM547160 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180579.1	COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: nmc:NMC1607 DedA family integral membrane protein; PFAM: SNARE associated Golgi protein; SPTR: Possible DedA family membrane protein; PFAM: SNARE associated Golgi protein
YP_004180581.1	COGs: COG3276 Selenocysteine-specific translation elongation factor; InterProIPR005225: IPR004535: IPR000795: IPR004161: IPR 015191; KEGG: afw:Anae109_4150 selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3; SPTR: Selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU
YP_004180582.1	COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: sno:Snov_3500 protein of unknown function DUF2088; PFAM: Protein of unknown function DUF2088; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088)
YP_004180583.1	COGs: COG1666 conserved hypothetical protein; InterPro IPR007551; KEGG: tjr:TherJR_1429 protein of unknown function DUF520; PFAM: protein of unknown function DUF520; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF520)
YP_004180584.1	COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR005290: IPR000589; KEGG: plm:Plim_0379 ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: Ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_004180586.1	COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterProIPR012162: IPR004088: IPR003029: IPR001247: IPR 015847: IPR015848: IPR018111: IPR004087; KEGG: psl:Psta_4007 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase
YP_004180587.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467: IPR003661: IPR003594: IPR004358; KEGG: rba:RB6818 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Probable sensory transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004180588.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR002078: IPR001789: IPR002197: IPR020441: IPR 003593; KEGG: plm:Plim_1639 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Probable response regulatory protein (AtoC); PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_004180589.1	KEGG: psl:Psta_1460 DoxX family protein; SPTR: DoxX family protein
YP_004180590.1	COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: min:Minf_1437 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1
YP_004180591.1	COGs: COG0648 Endonuclease IV; InterPro IPR001719: IPR012307: IPR018246; KEGG: adg:Adeg_1744 apurinic endonuclease Apn1; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: AP endonuclease family 2; SPTR: Probable endonuclease 4; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)
YP_004180592.1	KEGG: psl:Psta_2041 type II and III secretion system protein; SPTR: Type II and III secretion system protein
YP_004180593.1	KEGG: gau:GAU_2321 hypothetical membrane protein; SPTR: Hypothetical membrane protein
YP_004180594.1	KEGG: psl:Psta_1964 YTV domain protein; SPTR: YTV domain protein
YP_004180595.1	COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813: IPR004838; KEGG: plm:Plim_1589 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: Arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase
YP_004180596.1	KEGG: pth:PTH_1929 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180597.1	InterPro IPR011742: IPR013383; KEGG: rce:RC1_3487 CRISPR-associated protein, putative; PFAM: CRISPR-associated protein TM1812; SPTR: CRISPR-associated protein, putative; TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein (cas_TM1812); TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated DxTHG motif protein
YP_004180598.1	KEGG: psl:Psta_4042 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180599.1	COGs: COG0063 sugar kinase; InterPro IPR000631: IPR017953; KEGG: psl:Psta_3845 carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; SPTR: Carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related
YP_004180600.1	COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR000031; KEGG: psl:Psta_3844 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: AIR carboxylase
YP_004180601.1	KEGG: mtp:Mthe_1626 periplasmic copper-binding; SPTR: Putative lipoprotein
YP_004180602.1	COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: plm:Plim_0943 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase
YP_004180603.1	COGs: COG3349 conserved hypothetical protein; InterPro IPR017830: IPR002937: IPR001613; KEGG: plm:Plim_3204 squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; SPTR: Carotene 7,8-desaturase; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: squalene-associated FAD-dependent desaturase
YP_004180604.1	COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060: IPR019845; KEGG: sus:Acid_1266 farnesyl-diphosphate farnesyltransferase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Farnesyl-diphosphate farnesyltransferase; PFAM: Squalene/phytoene synthase
YP_004180605.1	COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR017827: IPR002060; KEGG: plm:Plim_2245 squalene synthase HpnC; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase-related protein; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC
YP_004180606.1	KEGG: mta:Moth_1929 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180607.1	COGs: COG4325 membrane protein; InterPro IPR018723; KEGG: cyc:PCC7424_1901 hypothetical protein; PFAM: Protein of unknown function DUF2254, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2254)
YP_004180608.1	KEGG: sco:SCO2345 peptidodoglycan-binding membrane protein; SPTR: Putative peptidodoglycan-binding membrane protein
YP_004180609.1	InterPro IPR008671; KEGG: mrb:Mrub_0382 lycopene beta and epsilon cyclase; PFAM: Lycopene beta and epsilon cyclase; SPTR: Lycopene cyclase, putative; PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein
YP_004180610.1	InterPro IPR022270: IPR018130; KEGG: hma:rrnAC2066 Brp-like protein-like; SPTR: Brp-like protein-like; TIGRFAM: Beta-carotene 15,15'-monooxygenase, Brp/Blh family; TIGRFAM: beta-carotene 15,15'-monooxygenase, Brp/Blh family
YP_004180611.1	COGs: COG5524 Bacteriorhodopsin; InterPro IPR017402: IPR001425: IPR018229; KEGG: srm:SRM_01698 Xanthorhodopsin; PFAM: rhodopsin; SPTR: Xanthorhodopsin; PFAM: Bacteriorhodopsin-like protein
YP_004180612.1	KEGG: gox:GOX1189 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180613.1	COGs: COG0535 Fe-S oxidoreductase; KEGG: nde:NIDE3701 hypothetical protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641)
YP_004180614.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: srm:SRM_01382 N-acetylglucosaminyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004180615.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR004099: IPR000815: IPR012999; KEGG: gvi:gll0564 mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Mercuric reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_004180616.1	COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: rxy:Rxyl_1153 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF72
YP_004180617.1	COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789: IPR008207; KEGG: mgm:Mmc1_3271 PAS/PAC sensor hybrid histidine kinase; PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Hpt domain
YP_004180618.1	KEGG: psl:Psta_0249 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180619.1	InterPro IPR000357; KEGG: mbn:Mboo_0115 heat repeat-containing PBS lyase; PFAM: HEAT domain containing protein; SPTR: PBS lyase HEAT domain protein repeat-containing protein; PFAM: HEAT repeat
YP_004180620.1	KEGG: sus:Acid_1421 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 39
YP_004180621.1	COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR000438: IPR011762; KEGG: plm:Plim_0650 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; SPTR: Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_004180622.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: psl:Psta_1419 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Probable phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family
YP_004180623.1	COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: plm:Plim_0648 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_004180624.1	COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576: IPR015911; KEGG: tte:TTE1761 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_004180625.1	COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR006424: IPR020831: IPR020828: IPR020829: IPR 020832: IPR020830; KEGG: plm:Plim_0647 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Strongly similar to glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_004180626.1	KEGG: htu:Htur_4304 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180627.1	COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: slp:Slip_2317 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180628.1	COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: mrd:Mrad2831_0867 OsmC family protein; PFAM: OsmC family protein; SPTR: OsmC family protein; PFAM: OsmC-like protein
YP_004180629.1	COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR009056: IPR019781: IPR 019775: IPR001680; KEGG: psl:Psta_2093 planctomycete cytochrome c; PFAM: WD40 repeat, subgroup; SPTR: Planctomycete cytochrome C; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C
YP_004180630.1	InterPro IPR003343: IPR011444; KEGG: psl:Psta_2092 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004180631.1	InterPro IPR007280; KEGG: psl:Psta_2091 peptidase domain protein; PFAM: peptidase domain protein; SPTR: Peptidase domain protein; PFAM: Bacterial Ig-like domain (DUF1927)
YP_004180632.1	InterPro IPR006311: IPR017909: IPR010869; KEGG: psl:Psta_2090 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004180633.1	COGs: COG0328 Ribonuclease HI; InterPro IPR002156; KEGG: psl:Psta_2497 ribonuclease H; PFAM: ribonuclease H; PRIAM: Ribonuclease H; SPTR: Ribonuclease H; PFAM: RNase H
YP_004180634.1	COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: psl:Psta_0791 HI0933 family protein; PFAM: HI0933 family protein; SPTR: HI0933 family protein; PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family
YP_004180635.1	InterPro IPR003593; KEGG: plm:Plim_3352 AAA ATPase; SMART: AAA ATPase; SPTR: Putative uncharacterized protein
YP_004180636.1	COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: avi:Avi_0051 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family
YP_004180637.1	COGs: COG1411 Uncharacterized protein related to proFAR isomerase (HisA); InterPro IPR006062; KEGG: vap:Vapar_3068 histidine biosynthesis protein; PFAM: histidine biosynthesis protein; SPTR: HisA/HisF family protein, putative; PFAM: Histidine biosynthesis protein
YP_004180638.1	InterPro IPR011761: IPR003806; KEGG: mpt:Mpe_A2621 hypothetical protein; PFAM: protein of unknown function DUF201; SPTR: Putative uncharacterized protein; PFAM: ATP-grasp domain
YP_004180639.1	COGs: COG1548 transcriptional regulator/sugar kinase; InterPro IPR002756: IPR002821; KEGG: plm:Plim_0257 H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; SPTR: Conserved protein; TIGRFAM: H4MPT-linked C1 transfer pathway protein; manually curated; PFAM: Hydantoinase/oxoprolinase; TIGRFAM: probable H4MPT-linked C1 transfer pathway protein
YP_004180640.1	COGs: COG2054 Uncharacterized kinase related to aspartokinase uridylate kinase; InterPro IPR001048; KEGG: psl:Psta_3593 aspartate/glutamate/uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Aspartate/glutamate/uridylate kinase; PFAM: Amino acid kinase family
YP_004180641.1	COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; InterPro IPR002035; KEGG: plm:Plim_0521 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: von Willebrand factor type A domain
YP_004180642.1	COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: plm:Plim_1164 magnesium protoporphyrin chelatase, putative; SPTR: Magnesium protoporphyrin chelatase, putative
YP_004180643.1	InterPro IPR013222; KEGG: psl:Psta_2909 glycosyl hydrolase family 98 putative carbohydrate binding module; PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; SPTR: Putative uncharacterized protein; PFAM: NPCBM/NEW2 domain
YP_004180644.1	InterPro IPR001330; KEGG: psl:Psta_2910 hypothetical protein; PFAM: Prenyltransferase/squalene oxidase; SPTR: Putative uncharacterized protein
YP_004180645.1	KEGG: psl:Psta_2911 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180646.1	KEGG: srm:SRM_02025 conserved hypothetical protein, membrane; SPTR: Putative uncharacterized protein
YP_004180647.1	InterPro IPR002035: IPR010768; KEGG: psl:Psta_2913 protein of unknown function DUF1355; PFAM: protein of unknown function DUF1355; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355)
YP_004180648.1	InterPro IPR011933: IPR002035; KEGG: psl:Psta_2914 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: von Willebrand factor type A domain; Aerotolerance regulator N-terminal; CARDB; TIGRFAM: N-terminal double-transmembrane domain
YP_004180649.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881: IPR002035; KEGG: psl:Psta_2915 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58
YP_004180650.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR016366: IPR011703; KEGG: psl:Psta_2916 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: Putative uncharacterized protein; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004180651.1	InterPro IPR002372: IPR019734: IPR018391; KEGG: psl:Psta_2917 hypothetical protein; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; SPTR: Putative uncharacterized protein
YP_004180652.1	InterPro IPR002052; KEGG: afv:AFLA_092170 hypothetical protein; SPTR: Minus agglutinin
YP_004180653.1	COGs: COG0373 Glutamyl-tRNA reductase; InterProIPR000343: IPR015895: IPR006151: IPR015896: IPR 018214; KEGG: plm:Plim_1296 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; SPTR: Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase
YP_004180654.1	InterPro IPR002541; KEGG: psl:Psta_0386 hypothetical protein; PFAM: cytochrome c assembly protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome C assembly protein
YP_004180655.1	KEGG: cre:CHLREDRAFT_173152 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180656.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160: IPR000253: IPR005829; KEGG: hoh:Hoch_5913 diguanylate cyclase; PFAM: GGDEF domain containing protein; Forkhead-associated protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004180657.1	InterPro IPR003343: IPR011444; KEGG: sus:Acid_5709 hypothetical protein; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004180658.1	COGs: COG1225 Peroxiredoxin; InterPro IPR017936: IPR000866; KEGG: psl:Psta_2043 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004180659.1	KEGG: hau:Haur_0785 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180660.1	COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR006200: IPR006199: IPR019759: IPR006197; KEGG: plm:Plim_2243 LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region; SPTR: LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA
YP_004180661.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: rba:RB3342 hypothetical protein; PFAM: LmbE family protein; SPTR: Putative uncharacterized protein; PFAM: GlcNAc-PI de-N-acetylase
YP_004180662.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160; KEGG: psl:Psta_1855 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family
YP_004180663.1	COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327: IPR002294; KEGG: rrs:RoseRS_0743 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_004180664.1	COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: plm:Plim_0026 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Di-haem cytochrome c peroxidase family protein; PFAM: Di-haem cytochrome c peroxidase
YP_004180665.1	InterPro IPR012902: IPR001120; KEGG: plm:Plim_0027 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180666.1	COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR000965: IPR012134: IPR015590: IPR020593; KEGG: psl:Psta_3777 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_004180667.1	COGs: COG0294 Dihydropteroate synthase; InterPro IPR006390: IPR000489; KEGG: mfa:Mfla_0784 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_004180668.1	KEGG: plm:Plim_0727 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180669.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_0726 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein
YP_004180670.1	COGs: COG1381 Recombinational DNA repair protein (RecF pathway); InterPro IPR003717; KEGG: plm:Plim_0725 DNA repair protein RecO; PFAM: Recombination protein O RecO; SPTR: DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO
YP_004180671.1	COGs: COG5012 cobalamin binding protein; InterPro IPR010093: IPR006158: IPR000551; KEGG: psl:Psta_1633 DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; SPTR: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; B12 binding domain; TIGRFAM: DNA binding domain, excisionase family
YP_004180672.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR014284: IPR007627: IPR007630: IPR000943; KEGG: sti:Sthe_1849 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004180673.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR016366: IPR011703; KEGG: shc:Shell_0365 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase, AAA family protein; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004180674.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: gau:GAU_1525 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58
YP_004180675.1	KEGG: fre:Franean1_4833 LuxR family transcriptional regulator; SPTR: Putative uncharacterized protein
YP_004180676.1	InterPro IPR002035; KEGG: cte:CT2278 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain
YP_004180677.1	InterPro IPR002035; KEGG: rlg:Rleg_5138 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain
YP_004180678.1	KEGG: mrb:Mrub_1682 putative adenylate/guanylate cyclase; SPTR: Putative uncharacterized protein
YP_004180679.1	KEGG: cre:CHLREDRAFT_193606 hypothetical protein; SPTR: Protein disulfide isomerase
YP_004180680.1	InterPro IPR000620; KEGG: plm:Plim_0609 protein of unknown function DUF6 transmembrane; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_004180681.1	COGs: COG0531 Amino acid transporter; InterPro IPR002293: IPR004841; KEGG: gau:GAU_2006 putative permease; PFAM: amino acid permease-associated region; SPTR: Putative permease; PFAM: Amino acid permease
YP_004180682.1	InterPro IPR006342: IPR010916; KEGG: sco:SCO3866 hypothetical protein; SPTR: Mucin-2; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family
YP_004180683.1	COGs: COG1407 ICC-like phosphoesterase; KEGG: pfu:PF1484 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative phosphoesterase, SbcD/Mre11-related
YP_004180684.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: hau:Haur_4875 putative lipase/esterase; SPTR: Alpha/beta hydrolase domain-containing protein; PFAM: Prolyl oligopeptidase family
YP_004180685.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: plm:Plim_3231 hypothetical protein; PFAM: peptidase M24; SPTR: Putative uncharacterized protein; PFAM: Metallopeptidase family M24
YP_004180686.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dae:Dtox_2285 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily
YP_004180687.1	InterPro IPR011465; KEGG: psl:Psta_2867 protein of unknown function DUF1571; PFAM: protein of unknown function DUF1571; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1571)
YP_004180688.1	COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: plm:Plim_1165 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Ribosomal-protein-alanine acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004180689.1	InterPro IPR002575; KEGG: psl:Psta_0027 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Putative uncharacterized protein; PFAM: Phosphotransferase enzyme family
YP_004180690.1	COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: bba:Bd1606 cytochrome c-type biogenesis protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome C assembly protein; PFAM: Cytochrome C assembly protein
YP_004180691.1	KEGG: amr:AM1_4402 cytochrome c biogenesis protein, CcsB-like protein, putative; SPTR: Cytochrome c biogenesis protein, CcsB-like protein, putative; PFAM: ResB-like family
YP_004180692.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: psl:Psta_3599 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004180693.1	KEGG: cel:ZK643.8 GRound-Like (grd related); SPTR: Protein ZK643.8, partially confirmed by transcript evidence
YP_004180694.1	COGs: COG4446 conserved hypothetical protein; InterPro IPR010865; KEGG: ana:all1003 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1499)
YP_004180695.1	InterPro IPR013026; KEGG: chu:CHU_0144 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180696.1	COGs: COG2071 glutamine amidotransferase; InterPro IPR017926: IPR011697; KEGG: psl:Psta_2837 peptidase C26; PFAM: peptidase C26; SPTR: Peptidase C26; PFAM: Peptidase C26
YP_004180697.1	KEGG: sus:Acid_4274 serine/threonine protein kinase; SPTR: Serine/threonine protein kinase; TIGRFAM: repeat-companion domain TIGR02996
YP_004180698.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439: IPR017940: IPR001140: IPR017871: IPR 003593; KEGG: psl:Psta_3757 ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter transmembrane region; ABC transporter
YP_004180699.1	KEGG: cpv:cgd5_2180 hypothetical protein; SPTR: Large low complexity protein with proline/alanine-rich repeat
YP_004180700.1	COGs: COG3361 conserved hypothetical protein; KEGG: scl:sce2492 hypothetical protein; SPTR: Putative uncharacterized protein yqjF; PFAM: Uncharacterized conserved protein (COG2071)
YP_004180701.1	COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991: IPR018107; KEGG: lhk:LHK_01881 sodium:dicarboxylate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: C4-dicarboxylate transport protein; PFAM: Sodium:dicarboxylate symporter family
YP_004180702.1	KEGG: syf:Synpcc7942_1563 signal transduction inhibitor; SPTR: Signal transduction inhibitor
YP_004180703.1	COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087: IPR017970; KEGG: plm:Plim_2575 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family; SPTR: Putative secreted protein; PFAM: GDSL-like Lipase/Acylhydrolase
YP_004180704.1	KEGG: psl:Psta_4523 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180705.1	InterPro IPR012902; KEGG: psl:Psta_2737 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180706.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: mac:MA3293 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_004180707.1	COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: psl:Psta_4381 threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: L-allo-threonine aldolase; PFAM: Beta-eliminating lyase
YP_004180708.1	COGs: COG0141 Histidinol dehydrogenase; InterPro IPR012131: IPR001692; KEGG: rba:RB1584 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_004180709.1	COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: rpf:Rpic12D_2432 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004180710.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR005861: IPR004839: IPR004838; KEGG: psl:Psta_4386 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_004180711.1	COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807: IPR020565; KEGG: plm:Plim_3413 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase
YP_004180712.1	KEGG: plm:Plim_1029 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein
YP_004180713.1	InterPro IPR000933; KEGG: cai:Caci_0886 alpha-L-fucosidase; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase
YP_004180714.1	KEGG: dsa:Desal_0810 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180715.1	COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886: IPR001509: IPR020904; KEGG: jan:Jann_4249 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_004180716.1	KEGG: plm:Plim_3249 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180717.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: afr:AFE_3291 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family
YP_004180718.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: sli:Slin_0510 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004180719.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR003018; KEGG: rba:RB7461 sensor kinase; PFAM: response regulator receiver; GAF domain protein; SMART: response regulator receiver; GAF domain protein; SPTR: Probable sensor kinase; PFAM: Response regulator receiver domain; GAF domain
YP_004180720.1	KEGG: rba:RB12630 signal peptide; SPTR: Putative uncharacterized protein
YP_004180721.1	InterPro IPR010869; KEGG: rba:RB12566 sulfatase; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004180722.1	InterPro IPR011444; KEGG: rba:RB12567 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553)
YP_004180723.1	InterPro IPR000276: IPR018122; KEGG: cyh:Cyan8802_3251 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180724.1	KEGG: sti:Sthe_2169 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180725.1	COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466: IPR000755: IPR001412; KEGG: rba:RB8687 beta-lactamase; PFAM: beta-lactamase; peptidase M15D vanX D-ala-D-ala dipeptidase; SPTR: Probable beta-lactamase; PFAM: D-ala-D-ala dipeptidase; Beta-lactamase
YP_004180726.1	KEGG: rop:ROP_23240 non-ribosomal peptide synthetase; SPTR: Non-ribosomal peptide synthetase
YP_004180727.1	COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137: IPR001451; KEGG: dak:DaAHT2_0859 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR:Acyl-(Acyl-carrier-protein)--UDP-N-acetylgluco samineO-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_004180728.1	KEGG: scl:sce0619 protein kinase; SPTR: Thioredoxin reductase 1, cytoplasmic
YP_004180729.1	KEGG: ath:AT1G26110 hypothetical protein; SPTR: Putative uncharacterized protein F28B23.21
YP_004180730.1	InterPro IPR000601; KEGG: mar:MAE_61060 hyalin repeat-containing protein; SPTR: Hyalin repeat protein
YP_004180731.1	KEGG: fgr:FG04574.1 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180732.1	KEGG: lil:LA_1230 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180733.1	KEGG: rrs:RoseRS_4066 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180734.1	COGs: COG0058 Glucan phosphorylase; InterPro IPR011834: IPR000811; KEGG: psl:Psta_1121 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: Alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases
YP_004180735.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: plm:Plim_0821 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain
YP_004180736.1	KEGG: afo:Afer_1166 prevent-host-death family protein; SPTR: Prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_004180737.1	COGs: COG2242 Precorrin-6B methylase 2; InterProIPR012818: IPR014008: IPR006342: IPR006365: IPR 000878: IPR007848; KEGG: psl:Psta_2973 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; methyltransferase small; PRIAM: Precorrin-6Y C(5,15)-methyltransferase (decarboxylating); SPTR: Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; methyltransferase FkbM family; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; methyltransferase, FkbM family; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
YP_004180738.1	KEGG: ote:Oter_2039 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180739.1	COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: hoh:Hoch_5972 guanine deaminase; PFAM: amidohydrolase; SPTR: Guanine deaminase; PFAM: Amidohydrolase family; TIGRFAM: guanine deaminase
YP_004180740.1	COGs: COG0824 thioesterase; InterPro IPR006684: IPR006683; KEGG: plm:Plim_2936 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: Putative uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_004180741.1	KEGG: cre:CHLREDRAFT_195506 protein with ARF GTPase-activating domain; SPTR: Protein with ARF GTPase-activating domain
YP_004180742.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: psl:Psta_4044 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004180743.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: fre:Franean1_0134 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase with PASTA sensor(S); PFAM: Protein kinase domain
YP_004180744.1	COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: sli:Slin_1433 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme
YP_004180745.1	COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096: IPR001750; KEGG: plm:Plim_3870 proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_004180746.1	COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227: IPR001750: IPR003918; KEGG: psl:Psta_0731 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_004180747.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR001516: IPR001750: IPR003945: IPR003916: IPR 018393; KEGG: plm:Plim_3868 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_004180748.1	COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: psl:Psta_0733 NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_004180749.1	COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: psl:Psta_0734 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_004180750.1	COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017900: IPR017896: IPR010226; KEGG: psl:Psta_0735 NADH-quinone oxidoreductase, chain I; SPTR: NADH-quinone oxidoreductase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_004180751.1	COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086: IPR001694; KEGG: plm:Plim_3864 NADH dehydrogenase (quinone); PFAM: respiratory-chain NADH dehydrogenase subunit 1; SPTR: NADH dehydrogenase (Quinone); PFAM: NADH dehydrogenase
YP_004180752.1	COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR000283: IPR001041: IPR019574: IPR006963: IPR 006656; KEGG: psl:Psta_0737 NADH dehydrogenase (ubiquinone); PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: NADH dehydrogenase (Ubiquinone); PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain
YP_004180753.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR001949: IPR011538: IPR019554: IPR019575: IPR 011537; KEGG: plm:Plim_3862 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit
YP_004180754.1	KEGG: vha:VIBHAR_01395 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180755.1	COGs: COG0657 Esterase/lipase; KEGG: psl:Psta_3524 exported endo-1,4-beta-xylanase; SPTR: Xylanase; PFAM: Prolyl oligopeptidase family; alpha/beta hydrolase fold
YP_004180756.1	COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR013149: IPR017743; KEGG: psl:Psta_3166 phosphonate catabolism associated alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Phosphonate catabolism associated alcohol dehydrogenase; TIGRFAM: phosphonate catabolism associated alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative phosphonate catabolism associated alcohol dehydrogenase
YP_004180758.1	COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: psl:Psta_0796 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase; SPTR: HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_004180759.1	KEGG: rpc:RPC_0738 Sel1; SPTR: Putative uncharacterized protein
YP_004180760.1	KEGG: vcj:VCD_001487 valine--pyruvate transaminase; SPTR: Valine-pyruvate aminotransferase
YP_004180761.1	InterPro IPR010496; KEGG: psl:Psta_2956 membrane-bound dehydrogenase domain protein; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080)
YP_004180762.1	KEGG: cag:Cagg_0822 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180763.1	InterPro IPR001434; KEGG: psl:Psta_4233 conserved repeat domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved repeat domain protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain
YP_004180764.1	KEGG: plm:Plim_0397 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180765.1	KEGG: cfa:611798 D4, zinc and double PHD fingers, family 3
YP_004180766.1	KEGG: plm:Plim_0396 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180767.1	COGs: COG1102 Cytidylate kinase; KEGG: dat:HRM2_42640 Cmk3; SPTR: Cmk3
YP_004180768.1	COGs: COG0316 conserved hypothetical protein; InterPro IPR017870: IPR000361: IPR016092; KEGG: plm:Plim_2978 iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: Iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein
YP_004180769.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006140: IPR006139; KEGG: psl:Psta_2972 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004180770.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: dfe:Dfer_4144 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Probable NADH-dependent dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_004180771.1	KEGG: plm:Plim_0457 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180772.1	KEGG: tbr:Tb10.70.0140 ATP-dependent DEAD/H RNA helicase HEL64; SPTR: ATP-dependent DEAD/H RNA helicase HEL64, putative
YP_004180773.1	KEGG: bch:Bcen2424_0447 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180774.1	InterPro IPR003115: IPR002052: IPR002941; KEGG: cyt:cce_3783 hypothetical protein; PFAM: ParB domain protein nuclease; DNA methylase N-4/N-6 domain protein; SMART: ParB domain protein nuclease; SPTR: Similar to tr|Q978H7|Q978H7; PFAM: ParB-like nuclease domain; DNA methylase; TIGRFAM: ParB-like partition proteins
YP_004180775.1	COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR001468: IPR013798; KEGG: psl:Psta_0336 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_004180776.1	COGs: COG1624 conserved hypothetical protein; InterPro IPR014499: IPR003390; KEGG: psl:Psta_3542 protein of unknown function DUF147; PFAM: protein of unknown function DUF147; SPTR: Putative uncharacterized protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding
YP_004180777.1	InterPro IPR005819; KEGG: pcs:Pc22g03720 Pc22g03720; SPTR: Pc22g03720 protein
YP_004180778.1	COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR017459: IPR000312: IPR005940; KEGG: tro:trd_0104 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase
YP_004180779.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001254: IPR001940; KEGG: psl:Psta_2163 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: 2-alkenal reductase; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_004180780.1	COGs: COG1734 DnaK suppressor protein; InterPro IPR020458: IPR000962; KEGG: psl:Psta_2164 transcriptional regulator, TraR/DksA family; SPTR: Transcriptional regulator, TraR/DksA family; PFAM: Prokaryotic dksA/traR C4-type zinc finger
YP_004180781.1	COGs: COG0457 FOG: TPR repeat; InterPro IPR019734: IPR013026: IPR001440; KEGG: pcs:Pc22g03720 Pc22g03720; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Pc22g03720 protein; PFAM: Tetratricopeptide repeat
YP_004180782.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: ter:Tery_3248 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain
YP_004180783.1	InterPro IPR010496; KEGG: dfe:Dfer_0069 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080)
YP_004180784.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: ava:Ava_4240 twin-arginine translocation pathway signal; PFAM: sulfatase; SPTR: Twin-arginine translocation pathway signal; PFAM: Sulfatase
YP_004180785.1	COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: chl:Chy400_1467 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase
YP_004180786.1	COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; InterPro IPR020555: IPR003526; KEGG: bpa:BPP3365 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_004180787.1	COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803: IPR015273: IPR002308; KEGG: psl:Psta_3589 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_004180788.1	COGs: COG0817 Holliday junction resolvasome endonuclease subunit; InterPro IPR020563: IPR002176; KEGG: psl:Psta_3588 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_004180789.1	COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; InterPro IPR003749: IPR008867: IPR010035; KEGG: plm:Plim_3633 thiazole biosynthesis family protein; PFAM: thiazole biosynthesis family protein; thiamineS protein; SPTR: Thiazole synthase; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: ThiS family; Thiazole biosynthesis protein ThiG; TIGRFAM: thiamine biosynthesis protein ThiS
YP_004180790.1	KEGG: tet:TTHERM_00046210 Adenylate and Guanylate cyclase catalytic domain containing protein; SPTR: Adenylate and Guanylate cyclase catalytic domain containing protein
YP_004180791.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789; KEGG: lch:Lcho_3971 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain
YP_004180792.1	KEGG: aor:AO090011000012 hypothetical protein; SPTR: Predicted protein
YP_004180793.1	COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR019734: IPR002545: IPR013026; KEGG: cel:ZK84.1 hypothetical protein; PFAM: CheW domain protein; SMART: CheW domain protein; Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; PFAM: CheW-like domain
YP_004180794.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660: IPR004089; KEGG: pap:PSPA7_0511 twitching motility protein PilJ; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_004180795.1	COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207: IPR003594: IPR002545: IPR001789: IPR 005467: IPR004105: IPR004358; KEGG: aeh:Mlg_0359 CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; SPTR: CheA signal transduction histidine kinase; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_004180796.1	InterPro IPR002545; KEGG: met:M446_2054 CheW protein; PFAM: CheW domain protein; SPTR: CheW protein; PFAM: CheW-like domain
YP_004180797.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyc:PCC7424_1248 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Domain of unknown function (DUF3495); Glycosyl transferases group 1
YP_004180798.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR017985; KEGG: rcp:RCAP_rcc02544 ABC transporter substrate-binding protein; SPTR: ABC transporter, substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein
YP_004180799.1	KEGG: cts:Ctha_0316 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180800.1	COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; InterPro IPR019196; KEGG: cts:Ctha_0317 putative permease of ABC transporter; PFAM: ABC-type uncharacterised transport system; SPTR: Putative permease of ABC transporter; PFAM: ABC-type uncharacterized transport system
YP_004180801.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cts:Ctha_0318 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter
YP_004180802.1	COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: gsu:GSU3282 siroheme synthase; SPTR: Siroheme synthase, N-terminal domain protein; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain
YP_004180803.1	KEGG: scl:sce3364 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180804.1	COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: plm:Plim_2933 sulphate transporter; PFAM: sulphate transporter; SPTR: Sulphate transporter; PFAM: Sulfate transporter family
YP_004180805.1	COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: plm:Plim_0254 protein of unknown function UPF0047; PFAM: protein of unknown function UPF0047; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme
YP_004180806.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: plm:Plim_2857 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004180807.1	KEGG: ote:Oter_0353 hypothetical protein; SPTR: Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein
YP_004180808.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: rca:Rcas_0800 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004180809.1	COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013217; KEGG: tbi:Tbis_2366 type 11 methyltransferase; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004180810.1	KEGG: psl:Psta_3986 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180811.1	COGs: COG3326 membrane protein; InterPro IPR011129: IPR002059: IPR010718; KEGG: reh:PHG169 hypothetical protein; PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; SPTR: Putative uncharacterized protein; PFAM: 'Cold-shock' DNA-binding domain; Protein of unknown function (DUF1294)
YP_004180812.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: psl:Psta_3650 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004180813.1	KEGG: gdj:Gdia_0284 Smr protein/MutS2; SPTR: Putative small MutS related protein
YP_004180814.1	InterPro IPR012902; KEGG: plm:Plim_4238 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004180815.1	KEGG: cac:CA_C3325 periplasmic amino acid binding protein; SPTR: Periplasmic amino acid binding protein
YP_004180816.1	InterPro IPR006652; KEGG: plm:Plim_2580 kelch repeat-containing protein; PFAM: Kelch repeat type 1-containing protein; SMART: Kelch repeat type 1-containing protein; SPTR: Putative uncharacterized protein; PFAM: Kelch motif
YP_004180817.1	COGs: COG1994 Zn-dependent protease; InterPro IPR000644: IPR016483: IPR008915; KEGG: rmr:Rmar_0832 peptidase M50; PFAM: peptidase M50; CBS domain containing protein; SPTR: Peptidase M50; PFAM: CBS domain; Peptidase family M50
YP_004180818.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: rba:RB5479 sensory transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: PAS domain S-box; PFAM: Response regulator receiver domain
YP_004180819.1	COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: sfu:Sfum_1497 response regulator receiver protein; SPTR: Response regulator receiver protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004180820.1	KEGG: tbd:Tbd_2116 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180821.1	KEGG: mno:Mnod_7391 sodium/hydrogen exchanger; SPTR: Putative uncharacterized protein
YP_004180822.1	KEGG: cci:CC1G_13638 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180823.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: min:Minf_1294 aldo/keto reductase family enzyme; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase family enzyme; PFAM: Aldo/keto reductase family
YP_004180824.1	KEGG: rca:Rcas_0215 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004180825.1	KEGG: stp:Strop_1530 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004180826.1	COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: nde:NIDE0244 putative radical-activating enzyme, radical SAM superfamily; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily
YP_004180827.1	InterPro IPR001647; KEGG: psl:Psta_1008 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_004180828.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: amr:AM1_A0123 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_004180829.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR000731: IPR001036; KEGG: mar:MAE_27670 RND multidrug efflux transporter; PFAM: acriflavin resistance protein; SPTR: RND multidrug efflux transporter; PFAM: AcrB/AcrD/AcrF family
YP_004180830.1	COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: dar:Daro_0055 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family
YP_004180831.1	COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR020578: IPR000192; KEGG: psl:Psta_2949 aminotransferase class V; PFAM: aminotransferase class V; SPTR: Aminotransferase class V; PFAM: Aminotransferase class-V
YP_004180832.1	KEGG: pbe:PB001026.00.0 circumsporozoite (CS) protein; SPTR: Circumsporozoite (CS) protein, putative
YP_004180833.1	COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; InterPro IPR004424: IPR006204: IPR013750; KEGG: psl:Psta_0133 4-diphosphocytidyl-2C-methyl-D-erythritolkinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_004180834.1	COGs: COG2088 Uncharacterized protein involved in the regulation of septum location; InterPro IPR007170; KEGG: psl:Psta_0132 SpoVG family protein; PFAM: SpoVG family protein; SPTR: SpoVG family protein; PFAM: SpoVG
YP_004180835.1	KEGG: sth:STH205 putative superoxide dismutase; SPTR: Putative uncharacterized protein P0501E09.33
YP_004180836.1	COGs: COG0469 Pyruvate kinase; InterPro IPR018209: IPR015793: IPR015794: IPR001697; KEGG: plm:Plim_3274 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase