-- dump date 20111121_012651 -- class Genbank::CDS -- table cds_note -- id note YP_004429260.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: cat:CA2559_12738 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_004429262.1 KEGG: rbi:RB2501_09355 NADPH-dependent glutamate synthase, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004429263.1 KEGG: rbi:RB2501_09360 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein YP_004429264.1 KEGG: rbi:RB2501_11127 hypothetical protein YP_004429265.1 PFAM: nitrogen regulatory protein P-II; KEGG: rbi:RB2501_11137 P-II family protein YP_004429266.1 KEGG: gfo:GFO_0493 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004429267.1 KEGG: gfo:GFO_0629 low molecular weight phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004429268.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: zpr:ZPR_3592 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_004429269.1 KEGG: zpr:ZPR_2907 hypothetical protein YP_004429270.1 KEGG: fjo:Fjoh_0440 hypothetical protein YP_004429271.1 PFAM: Amidohydrolase 3; KEGG: cat:CA2559_09378 predicted metal-dependent amidohydrolase with the TIM-barrel fold YP_004429272.1 KEGG: zpr:ZPR_2707 hypothetical protein YP_004429273.1 KEGG: osa:4331357 hypothetical protein YP_004429274.1 KEGG: gfo:GFO_2542 hypothetical protein YP_004429275.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; Tetratricopeptide TPR_3 repeat-containing protein; KEGG: cat:CA2559_00175 TPR-domain containing protein YP_004429276.1 PFAM: Pirin domain protein; KEGG: chu:CHU_3130 hypothetical protein YP_004429277.1 PFAM: peptidase M10A and M12B matrixin and adamalysin; KEGG: cat:CA2559_13468 hypothetical protein YP_004429278.1 KEGG: rbi:RB2501_11372 ATP-dependent protease La domain protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein YP_004429279.1 KEGG: cat:CA2559_08531 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004429280.1 KEGG: gfo:GFO_2759 secreted protein YP_004429281.1 PFAM: PhnA protein; KEGG: fjo:Fjoh_2615 PhnA protein-like protein YP_004429282.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: fps:FP1762 dioxygenase YP_004429283.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gfo:GFO_2223 subtilisin-like serine protease YP_004429284.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: cat:CA2559_00980 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_004429285.1 KEGG: cat:CA2559_00975 hypothetical protein YP_004429286.1 KEGG: rbi:RB2501_12547 adhesion lipoprotein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin YP_004429287.1 KEGG: cat:CA2559_07015 dipeptidyl-peptidase III YP_004429288.1 PFAM: transcription activator effector binding; Polyketide cyclase/dehydrase; KEGG: cat:CA2559_07010 hypothetical protein YP_004429289.1 KEGG: gfo:GFO_0495 CrcB-like protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_004429290.1 PFAM: protein of unknown function UPF0153; KEGG: cat:CA2559_09358 hypothetical protein YP_004429291.1 PFAM: Methyltransferase type 11; KEGG: fjo:Fjoh_0485 methyltransferase type 11 YP_004429292.1 PFAM: Protein of unknown function DUF2059; KEGG: cat:CA2559_09368 hypothetical protein YP_004429293.1 KEGG: gfo:GFO_2402 hypothetical protein YP_004429294.1 KEGG: cat:CA2559_01000 LysM-repeat domain protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004429295.1 KEGG: rbi:RB2501_12502 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_004429296.1 KEGG: fba:FIC_02077 hypothetical protein YP_004429297.1 KEGG: cat:CA2559_06945 probable transcription regulator protein; PFAM: Transcription regulator AsnC-type-like; regulatory protein MarR; SMART: Transcription regulator AsnC-type YP_004429298.1 KEGG: rcu:RCOM_1186860 serine-threonine protein kinase, plant-type YP_004429299.1 KEGG: cat:CA2559_07796 hypothetical protein YP_004429300.1 KEGG: zpr:ZPR_3688 hypothetical protein YP_004429301.1 KEGG: mmp:MMP0898 cellulose-binding YP_004429302.1 KEGG: cat:CA2559_07766 hypothetical protein YP_004429303.1 KEGG: cmi:CMM_0935 hypothetical protein YP_004429304.1 KEGG: cat:CA2559_05920 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004429305.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: gfo:GFO_2797 signal recognition particle protein; SMART: AAA ATPase YP_004429306.1 KEGG: cat:CA2559_11228 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_004429307.1 KEGG: rbi:RB2501_00336 hypothetical protein YP_004429308.1 PFAM: glycosyl transferase family 2; KEGG: rbi:RB2501_00341 glycosyl transferase, group 2 family protein YP_004429309.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: fjo:Fjoh_0112 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_004429310.1 KEGG: gfo:GFO_1059 lipid A export ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004429311.1 KEGG: rbi:RB2501_08455 hypothetical protein YP_004429312.1 KEGG: rbi:RB2501_14954 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_004429313.1 KEGG: gfo:GFO_1596 hypothetical protein YP_004429314.1 KEGG: rbi:RB2501_11507 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Beta-N-acetylhexosaminidase, subunit a/b YP_004429315.1 KEGG: cat:CA2559_11313 hypothetical protein YP_004429316.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: cat:CA2559_11948 probable peptidase YP_004429317.1 KEGG: cat:CA2559_11328 hypothetical protein YP_004429318.1 PFAM: thioesterase superfamily protein; KEGG: gfo:GFO_1516 acyl-CoA thioester hydrolase YP_004429319.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rbi:RB2501_12884 hypothetical protein YP_004429320.1 PFAM: glycoside hydrolase family 16; KEGG: rbi:RB2501_14499 beta-glucanase precursor YP_004429321.1 KEGG: sth:STH1871 hypothetical protein YP_004429322.1 KEGG: cyc:PCC7424_0398 endonuclease/exonuclease/phosphatase YP_004429323.1 KEGG: gvi:glr0500 hypothetical protein YP_004429324.1 PFAM: sodium:dicarboxylate symporter; KEGG: cat:CA2559_11013 proton/glutamate symporter YP_004429325.1 TIGRFAM: chorismate synthase; KEGG: gfo:GFO_1627 chorismate synthase; PFAM: chorismate synthase YP_004429326.1 PFAM: metallophosphoesterase; KEGG: cat:CA2559_11023 calcineurin-like phosphoesterase YP_004429327.1 KEGG: zpr:ZPR_2734 FAD-linked oxidase-like protein; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein YP_004429328.1 KEGG: cat:CA2559_11038 hypothetical protein YP_004429329.1 PFAM: glycosyl transferase group 1; KEGG: cat:CA2559_11043 glycosyltransferase YP_004429330.1 KEGG: cat:CA2559_11048 hydrolase/beta lactamase fusion protein; PFAM: glycoside hydrolase family 3 domain protein; beta-lactamase YP_004429331.1 KEGG: cat:CA2559_11053 hypothetical protein YP_004429332.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cat:CA2559_11058 iron-sulfur-binding reductase YP_004429333.1 KEGG: cat:CA2559_11063 hypothetical protein YP_004429334.1 manually curated; KEGG: cat:CA2559_11068 hypothetical protein YP_004429335.1 KEGG: cat:CA2559_11073 iron-sulfur protein YP_004429336.1 PFAM: Mammalian cell entry related domain protein; KEGG: zpr:ZPR_2741 secreted MCE family protein YP_004429337.1 KEGG: gfo:GFO_1639 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; Sporulation domain-containing protein; SMART: cell wall hydrolase/autolysin YP_004429338.1 KEGG: zpr:ZPR_2744 hypothetical protein YP_004429339.1 KEGG: cat:CA2559_11098 translation initiation inhibitor; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_004429340.1 KEGG: gfo:GFO_2314 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta YP_004429341.1 PFAM: protein of unknown function DUF450; KEGG: gfo:GFO_2315 hypothetical protein YP_004429342.1 PFAM: glycosyl transferase family 2; KEGG: cat:CA2559_12413 glycosyltransferase YP_004429343.1 PFAM: OmpA/MotB domain protein; KEGG: fjo:Fjoh_2921 OmpA/MotB domain-containing protein YP_004429344.1 PFAM: leucine-rich repeat-containing protein; KEGG: rbi:RB2501_09035 hypothetical protein YP_004429345.1 KEGG: zpr:ZPR_1214 YrdC domain-containing protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_004429346.1 KEGG: gfo:GFO_2322 hypothetical protein YP_004429347.1 PFAM: phospholipase/Carboxylesterase; KEGG: cat:CA2559_11223 probable lipase YP_004429348.1 PFAM: UvrD/REP helicase; KEGG: gfo:GFO_2323 PcrA-like UvrD/Rep family ATP-dependent DNA helicase YP_004429349.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cat:CA2559_06310 hypothetical protein YP_004429350.1 KEGG: tva:TVAG_045940 hypothetical protein YP_004429351.1 KEGG: ter:Tery_3514 hypothetical protein YP_004429352.1 KEGG: sdn:Sden_1882 hypothetical protein YP_004429353.1 KEGG: ava:Ava_3244 signal transduction protein YP_004429354.1 KEGG: svo:SVI_3076 hypothetical protein YP_004429355.1 KEGG: gga:771154 hypothetical protein LOC771154 YP_004429356.1 KEGG: zpr:ZPR_3083 hydrolase YP_004429357.1 KEGG: nam:NAMH_0520 M23 peptidase domain protein YP_004429358.1 KEGG: pcb:PC000367.00.0 hypothetical protein YP_004429359.1 KEGG: amr:AM1_5600 hypothetical protein YP_004429360.1 PFAM: Methyltransferase type 11; KEGG: psl:Psta_1354 methyltransferase type 11 YP_004429361.1 PFAM: Peptidase M23; KEGG: lbf:LBF_0679 metalloendopeptidase YP_004429362.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dfe:Dfer_0828 GCN5-related N-acetyltransferase YP_004429363.1 PFAM: protein of unknown function DUF1963; KEGG: syn:sll5081 hypothetical protein YP_004429364.1 KEGG: sus:Acid_1582 X-Pro dipeptidyl-peptidase domain-containing protein; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase domain protein YP_004429365.1 KEGG: cat:CA2559_06920 hypothetical protein YP_004429366.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: fjo:Fjoh_0267 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004429367.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: zpr:ZPR_1175 tetrahydrobiopterin biosynthesis-like protein YP_004429368.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; KEGG: cat:CA2559_13638 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase YP_004429369.1 PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; KEGG: cat:CA2559_13643 OmpA family protein YP_004429370.1 TIGRFAM: membrane protein; KEGG: cat:CA2559_13648 hypothetical protein YP_004429371.1 KEGG: cat:CA2559_00005 transcriptional regulator, AraC family with parallel beta-helix repeat; TIGRFAM: conserved repeat domain protein; outer membrane adhesin like proteiin; PFAM: protein of unknown function DUF11 YP_004429372.1 KEGG: gfo:GFO_2365 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding YP_004429373.1 KEGG: fjo:Fjoh_1928 hypothetical protein YP_004429374.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; CBS domain containing protein; KEGG: fps:FP1196 cysteine synthase/cystathionine beta-synthase family protein YP_004429375.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: cat:CA2559_10273 alanine dehydrogenase YP_004429376.1 KEGG: gfo:GFO_1782 hypothetical protein YP_004429377.1 PFAM: esterase; KEGG: taf:THA_1136 carbohydrate esterase, family 1 YP_004429378.1 KEGG: ctp:CTRG_03464 hypothetical protein YP_004429379.1 PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: bfs:BF1740 hypothetical protein YP_004429380.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pmo:Pmob_1269 RNA-directed DNA polymerase (reverse transcriptase) YP_004429381.1 KEGG: par:Psyc_1584 hypothetical protein YP_004429382.1 KEGG: bbe:BBR47_21320 hypothetical protein YP_004429383.1 KEGG: zpr:ZPR_1593 hypothetical protein YP_004429384.1 KEGG: phe:Phep_1491 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004429385.1 KEGG: jde:Jden_0477 hypothetical protein YP_004429386.1 KEGG: bga:BGA68 hypothetical protein YP_004429387.1 PFAM: Two component regulator propeller; KEGG: rmr:Rmar_1703 histidine kinase YP_004429388.1 KEGG: cat:CA2559_06870 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; ArgK protein YP_004429389.1 KEGG: zpr:ZPR_3144 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_004429390.1 KEGG: cat:CA2559_06865 hypothetical protein YP_004429391.1 KEGG: cat:CA2559_06860 hypothetical protein YP_004429392.1 PFAM: periplasmic binding protein; KEGG: cat:CA2559_06845 predicted ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_004429393.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: fps:FP0537 orotidine-5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_004429394.1 KEGG: zpr:ZPR_3150 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_004429395.1 KEGG: zpr:ZPR_3152 membrane protein YP_004429396.1 KEGG: gfo:GFO_0473 membrane protein YP_004429397.1 KEGG: cat:CA2559_13623 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein YP_004429398.1 PFAM: Membrane attack complex component/perforin (MACPF) domain; Ankyrin; KEGG: tva:TVAG_407340 ankyrin repeat protein YP_004429399.1 KEGG: fjo:Fjoh_2352 fibronectin, type III domain-containing protein YP_004429400.1 PFAM: Curli production assembly/transport component CsgG; KEGG: fjo:Fjoh_2351 curli production assembly/transport component CsgG YP_004429401.1 PFAM: Curli production assembly/transport component CsgF; KEGG: fjo:Fjoh_2350 hypothetical protein YP_004429402.1 PFAM: Curli assembly protein CsgE; KEGG: fba:FIC_01313 hypothetical protein YP_004429403.1 KEGG: fjo:Fjoh_2347 hypothetical protein YP_004429404.1 PFAM: Curlin associated repeat-containing protein; KEGG: svo:SVI_3722 hypothetical protein YP_004429405.1 PFAM: glutamine synthetase catalytic region; KEGG: zpr:ZPR_3154 glutamine synthetase YP_004429406.1 KEGG: rbi:RB2501_11032 glutamine synthetase II; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_004429407.1 KEGG: zpr:ZPR_3156 sodium/calcium exchanger protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region YP_004429408.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: cat:CA2559_08776 GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein YP_004429409.1 PFAM: ferric-uptake regulator; KEGG: zpr:ZPR_1675 ferric uptake regulation protein YP_004429410.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: zpr:ZPR_1674 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_004429411.1 KEGG: cat:CA2559_06755 hypothetical protein YP_004429412.1 KEGG: gfo:GFO_1071 hypothetical protein YP_004429413.1 PFAM: protein of unknown function DUF81; KEGG: syn:sll1052 hypothetical protein YP_004429414.1 PFAM: Lytic transglycosylase catalytic; KEGG: cat:CA2559_12858 membrane-bound lytic murein transglycosylase YP_004429415.1 KEGG: fps:FP2016 hypothetical protein YP_004429416.1 KEGG: gfo:GFO_1067 hypothetical protein YP_004429417.1 PFAM: phospholipase/Carboxylesterase; KEGG: gfo:GFO_2078 hypothetical protein YP_004429418.1 PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; KEGG: fjo:Fjoh_2275 OmpA/MotB domain-containing protein YP_004429419.1 TIGRFAM: membrane protein; KEGG: gfo:GFO_2864 hypothetical protein YP_004429420.1 KEGG: zpr:ZPR_3895 protein containing bacterial Ig-like domain YP_004429421.1 KEGG: cat:CA2559_07165 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_004429422.1 KEGG: zpr:ZPR_1192 hypothetical protein YP_004429423.1 PFAM: ABC-1 domain-containing protein; KEGG: zpr:ZPR_1193 protein kinase YP_004429424.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: zpr:ZPR_1195 3-oxoacyl-[acyl-carrier-protein] synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_004429425.1 KEGG: rbi:RB2501_11247 metal-dependent hydrolase YP_004429426.1 KEGG: fps:FP1908 peptidyl-prolyl cis-trans isomerase PpiC; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; peptidylprolyl isomerase FKBP-type YP_004429427.1 PFAM: metallophosphoesterase; KEGG: fjo:Fjoh_4666 phosphodiesterase YP_004429428.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: gfo:GFO_0425 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_004429429.1 KEGG: gfo:GFO_0426 ABC-type transporter ATP-binding and permease component; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004429430.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rbi:RB2501_03465 adenylate cyclase-related protein YP_004429431.1 KEGG: rbi:RB2501_10592 hypothetical protein YP_004429432.1 KEGG: rbi:RB2501_10592 hypothetical protein YP_004429433.1 PFAM: protein of unknown function DUF147; KEGG: cat:CA2559_13513 transmembrane protein YP_004429434.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cat:CA2559_07195 hypothetical protein YP_004429435.1 PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; KEGG: gfo:GFO_2343 heat shock protein 90 YP_004429436.1 KEGG: gfo:GFO_0627 hypothetical protein YP_004429437.1 KEGG: gfo:GFO_0627 hypothetical protein YP_004429438.1 PFAM: aminodeoxychorismate lyase; KEGG: cat:CA2559_12763 aminodeoxychorismate lyase YP_004429439.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cat:CA2559_12768 acetyltransferase YP_004429440.1 KEGG: fjo:Fjoh_0018 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_004429441.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: cat:CA2559_12778 serine protease precursor; SMART: PDZ/DHR/GLGF domain protein YP_004429442.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cat:CA2559_12783 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004429443.1 KEGG: cat:CA2559_12788 hypothetical protein YP_004429444.1 KEGG: cat:CA2559_12793 hypothetical protein YP_004429445.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cat:CA2559_12798 acetyltransferase, GNAT family protein YP_004429446.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: cat:CA2559_12703 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_004429447.1 manually curated YP_004429448.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_26230 transporter YP_004429449.1 PFAM: cyclase family protein; KEGG: rba:RB3656 polyketide cyclase YP_004429450.1 PFAM: major royal jelly protein; KEGG: ava:Ava_4197 hypothetical protein YP_004429451.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_1685 cupin 2 domain-containing protein YP_004429452.1 PFAM: cyclic nucleotide-binding; KEGG: cpi:Cpin_5404 transcriptional regulator, Crp/Fnr family YP_004429453.1 PFAM: Abortive infection protein; KEGG: cat:CA2559_09056 hypothetical protein YP_004429454.1 KEGG: fps:FP1734 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004429455.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cat:CA2559_12553 Cys/Met metabolism lyase (PLP-dependent) YP_004429456.1 KEGG: cat:CA2559_12548 Na+/H+ antiporter; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like YP_004429457.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: cat:CA2559_06225 thioredoxin peroxidase YP_004429458.1 PFAM: Thioredoxin domain-containing protein; KEGG: cat:CA2559_06230 thioredoxin YP_004429459.1 KEGG: fjo:Fjoh_2115 hypothetical protein YP_004429460.1 PFAM: protein of unknown function DUF427; KEGG: ppp:PHYPADRAFT_120042 hypothetical protein YP_004429461.1 PFAM: Redoxin domain protein; KEGG: fps:FP1594 thiol peroxidase YP_004429462.1 PFAM: diacylglycerol kinase; KEGG: cat:CA2559_06245 diacylglycerol kinase YP_004429463.1 KEGG: pyo:PY05582 hypothetical protein YP_004429464.1 KEGG: cat:CA2559_10873 hypothetical protein YP_004429465.1 KEGG: cat:CA2559_10873 hypothetical protein YP_004429466.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: cat:CA2559_06250 FtsK/SpoIIIE-like protein YP_004429467.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: cat:CA2559_06255 hypothetical protein YP_004429468.1 PFAM: permease YjgP/YjgQ family protein; KEGG: gfo:GFO_2185 permease YP_004429469.1 KEGG: cat:CA2559_06265 riboflavin biosynthesis protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_004429470.1 PFAM: glutamine cyclotransferase; KEGG: gfo:GFO_2260 glutamine cyclotransferase YP_004429471.1 KEGG: cat:CA2559_10788 TonB-dependent outer membrane receptor protein YP_004429472.1 KEGG: cat:CA2559_10793 hypothetical protein YP_004429473.1 PFAM: Peptidase M23; KEGG: fba:FIC_00926 hypothetical protein YP_004429474.1 KEGG: cat:CA2559_12863 hypothetical protein YP_004429475.1 KEGG: cat:CA2559_05010 hypothetical protein YP_004429476.1 KEGG: zpr:ZPR_3093 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_004429477.1 KEGG: cat:CA2559_12898 hypothetical protein YP_004429478.1 PFAM: Phosphoglycerate mutase; KEGG: zpr:ZPR_3087 phosphoglycerate mutase YP_004429480.1 PFAM: protein of unknown function DUF349; KEGG: cat:CA2559_06725 hypothetical protein YP_004429481.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: cat:CA2559_06730 shikimate 5-dehydrogenase YP_004429482.1 PFAM: protein of unknown function DUF368; KEGG: gfo:GFO_0768 hypothetical protein YP_004429483.1 PFAM: protein of unknown function DUF368; KEGG: cat:CA2559_06740 integral membrane protein YP_004429484.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cat:CA2559_06745 TPR repeat protein YP_004429485.1 KEGG: coc:Coch_1982 hypothetical protein YP_004429486.1 KEGG: gfo:GFO_0488 secreted protein YP_004429487.1 KEGG: rbi:RB2501_11657 secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A YP_004429488.1 KEGG: cat:CA2559_08326 ATP-binding component of ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004429489.1 KEGG: mhp:MHP7448_0315 ABC transporter ATP-binding protein YP_004429490.1 PFAM: Chorismate binding-like; KEGG: cat:CA2559_09868 para-aminobenzoate synthase, component I YP_004429491.1 KEGG: fjo:Fjoh_2016 hypothetical protein YP_004429492.1 PFAM: Protein of unknown function DUF2132; KEGG: cat:CA2559_03420 hypothetical protein YP_004429493.1 KEGG: coc:Coch_0941 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_004429494.1 KEGG: gfo:GFO_0764 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_004429495.1 KEGG: cat:CA2559_06165 hypothetical protein YP_004429496.1 TIGRFAM: peptide deformylase; KEGG: cat:CA2559_06160 peptide deformylase; PFAM: formylmethionine deformylase YP_004429497.1 KEGG: zpr:ZPR_3097 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_004429498.1 KEGG: fps:FP1628 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004429499.1 KEGG: cja:CJA_1364 capsular polysaccharide synthesis YP_004429500.1 KEGG: rbi:RB2501_11462 Zn-dependent alcohol dehydrogenase, class III YP_004429501.1 PFAM: glycosyl transferase family 2; KEGG: rbi:RB2501_11467 glycosyltransferase YP_004429502.1 PFAM: RNA binding S1 domain protein; KEGG: cat:CA2559_10333 30S ribosomal protein S1 YP_004429504.1 PFAM: glycoside hydrolase family 5; KEGG: ana:alr0290 hypothetical protein YP_004429505.1 KEGG: zpr:ZPR_1351 hypothetical protein YP_004429506.1 KEGG: fba:FIC_01177 hypothetical protein YP_004429507.1 KEGG: ptm:GSPATT00026254001 hypothetical protein YP_004429508.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: sli:Slin_0780 redoxin domain protein YP_004429509.1 KEGG: ptm:GSPATT00019378001 hypothetical protein YP_004429510.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: cat:CA2559_11183 pterin-4A-carbinolamine dehydratase YP_004429511.1 PFAM: protein of unknown function DUF28; KEGG: zpr:ZPR_2585 hypothetical protein YP_004429512.1 KEGG: cat:CA2559_10543 hypothetical protein YP_004429513.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: cat:CA2559_00525 arginine decarboxylase YP_004429514.1 KEGG: cat:CA2559_00520 arginase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_004429515.1 PFAM: deoxyhypusine synthase; KEGG: cat:CA2559_00515 hypothetical protein YP_004429516.1 KEGG: zpr:ZPR_2714 hypothetical protein YP_004429517.1 KEGG: dya:Dyak_GE16925 GE16925 gene product from transcript GE16925-RA YP_004429518.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: tpe:Tpen_1537 threonine synthase YP_004429519.1 PFAM: protein of unknown function DUF1611; KEGG: tsi:TSIB_1074 hypothetical protein YP_004429520.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: dat:HRM2_12000 chloromuconate cycloisomerase-like protein YP_004429521.1 KEGG: mar:MAE_43960 hypothetical protein YP_004429522.1 TIGRFAM: cytidylate kinase; KEGG: cat:CA2559_10343 cytidylate kinase; PFAM: cytidylate kinase region YP_004429523.1 KEGG: cat:CA2559_10348 hypothetical protein YP_004429524.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: cat:CA2559_09893 ATP-dependent protease; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein YP_004429525.1 KEGG: zpr:ZPR_1884 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004429526.1 KEGG: zpr:ZPR_1883 hypothetical protein YP_004429527.1 KEGG: rbi:RB2501_12712 hypothetical protein YP_004429528.1 KEGG: cat:CA2559_11208 hypothetical protein YP_004429529.1 KEGG: rbi:RB2501_03680 hypothetical protein YP_004429530.1 KEGG: cat:CA2559_12423 hypothetical protein YP_004429531.1 KEGG: gfo:GFO_1482 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_004429532.1 PFAM: major facilitator superfamily MFS_1; KEGG: zpr:ZPR_1880 major facilitator superfamily permease YP_004429533.1 PFAM: peptidase M48 Ste24p; KEGG: rbi:RB2501_12692 lipoprotein YP_004429534.1 KEGG: fjo:Fjoh_2746 alpha-glucosidase; PFAM: glycoside hydrolase family 31 YP_004429536.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; KEGG: gfo:GFO_2997 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain YP_004429537.1 PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: phe:Phep_3085 glucose-1-phosphate adenylyltransferase YP_004429538.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: phe:Phep_3086 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1 YP_004429539.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: cat:CA2559_12448 methionine sulfoxide reductase, SelR; PFAM: Methionine sulfoxide reductase B YP_004429540.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: zpr:ZPR_1876 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase B YP_004429541.1 KEGG: cat:CA2559_12463 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004429542.1 KEGG: aba:Acid345_1449 phosphodiesterase I; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase YP_004429543.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: gfo:GFO_1867 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_004429544.1 KEGG: cat:CA2559_11983 hypothetical protein YP_004429545.1 KEGG: fjo:Fjoh_0124 phage integrase family protein; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004429546.1 KEGG: gfo:GFO_2304 M24 family peptidase YP_004429547.1 KEGG: tps:THAPS_25324 hypothetical protein YP_004429548.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cat:CA2559_08306 O-succinylbenzoic acid--CoA ligase YP_004429549.1 PFAM: Abortive infection protein; KEGG: gfo:GFO_2309 hypothetical protein YP_004429550.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: zpr:ZPR_3063 O-succinylbenzoate synthase YP_004429551.1 PFAM: protein of unknown function DUF179; KEGG: gfo:GFO_1442 hypothetical protein YP_004429552.1 PFAM: aminotransferase class IV; KEGG: zpr:ZPR_2522 branched-chain-amino-acid aminotransferase YP_004429553.1 KEGG: gfo:GFO_1440 hypothetical protein YP_004429554.1 KEGG: gfo:GFO_1226 PAP2 superfamily membrane protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004429555.1 KEGG: cat:CA2559_11403 hypothetical protein YP_004429556.1 PFAM: alpha/beta hydrolase fold; KEGG: cat:CA2559_01560 alpha/beta hydrolase superfamily protein YP_004429557.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ddf:DEFDS_0726 multiple antibiotic transporter MarC family YP_004429558.1 KEGG: mea:Mex_2p1021 catalase/hydroperoxidase HPI(I); TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_004429559.1 PFAM: KDPG and KHG aldolase; KEGG: fjo:Fjoh_4260 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase YP_004429560.1 PFAM: PfkB domain protein; KEGG: fjo:Fjoh_4261 ribokinase-like domain-containing protein YP_004429561.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cat:CA2559_11468 acetoin(diacetyl)reductase YP_004429562.1 PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa1746 hexuronate transport protein (MFS) YP_004429563.1 KEGG: cat:CA2559_11478 transcriptional regulator, GntR family protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004429564.1 PFAM: Alginate lyase 2; KEGG: cat:CA2559_11483 hypothetical protein YP_004429565.1 KEGG: gfo:GFO_1155 PKD domain-containing protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein YP_004429566.1 PFAM: RagB/SusD domain protein; KEGG: cat:CA2559_11493 outer membrane protein YP_004429567.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cat:CA2559_11498 outer membrane protein YP_004429568.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cat:CA2559_11503 pectin degradation protein YP_004429569.1 PFAM: Heparinase II/III family protein; KEGG: cat:CA2559_11508 chondroitin AC/alginate lyase YP_004429570.1 PFAM: Heparinase II/III family protein; KEGG: cpy:Cphy_3022 heparinase II/III family protein YP_004429571.1 KEGG: gfo:GFO_1147 secreted alginate lyase-like protein YP_004429572.1 KEGG: gfo:GFO_0733 universal stress protein family protein YP_004429573.1 KEGG: zpr:ZPR_2211 hypothetical protein YP_004429574.1 KEGG: cat:CA2559_13438 hypothetical protein YP_004429575.1 KEGG: cat:CA2559_13443 GreA/GreB family elongation factor YP_004429576.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rbi:RB2501_10817 glutamate dehydrogenase YP_004429577.1 KEGG: cat:CA2559_13448 two component, sigma54 specific, transcriptional regulator, fis family protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004429578.1 KEGG: cat:CA2559_13453 sensor histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004429579.1 KEGG: cat:CA2559_10383 hypothetical protein YP_004429580.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: cpi:Cpin_6085 phosphoesterase PA-phosphatase related YP_004429581.1 KEGG: cat:CA2559_00625 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; MAM protein; Fibronectin type III domain protein; SMART: peptidase M14 carboxypeptidase A; MAM protein; Fibronectin type III domain protein YP_004429582.1 KEGG: cat:CA2559_10748 hypothetical protein YP_004429583.1 KEGG: gfo:GFO_0393 hyalin domain-containing protein; PFAM: Laminin G sub domain 2; SMART: LamG domain protein jellyroll fold domain protein YP_004429584.1 KEGG: srm:SRM_00081 conserved hypothetical protein, secreted YP_004429585.1 KEGG: gfo:GFO_0015 hyaluronan synthase; PFAM: glycosyl transferase family 2 YP_004429586.1 KEGG: zpr:ZPR_2799 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain-containing protein YP_004429587.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: fjo:Fjoh_2860 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase catalytic domain-containing protein YP_004429588.1 KEGG: rbi:RB2501_14424 acetohydroxyacid synthase small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_004429589.1 KEGG: fjo:Fjoh_2862 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004429590.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: rbi:RB2501_14414 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004429591.1 PFAM: Aldehyde Dehydrogenase; KEGG: cat:CA2559_08936 aldehyde dehydrogenase YP_004429592.1 KEGG: afv:AFLA_119110 NRPS-like enzyme YP_004429593.1 KEGG: gfo:GFO_2121 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2 YP_004429594.1 KEGG: zpr:ZPR_2807 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_004429595.1 PFAM: LamB/YcsF family protein; KEGG: zpr:ZPR_2808 LamB/YcsF family protein YP_004429596.1 PFAM: natural resistance-associated macrophage protein; KEGG: gfo:GFO_2124 manganese transport protein MntH YP_004429597.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; KEGG: fjo:Fjoh_0123 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein YP_004429598.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: cat:CA2559_08906 magnesium chelatase subunit ChlI; SMART: AAA ATPase YP_004429599.1 KEGG: cat:CA2559_08881 alpha-amino acid ester hydrolase; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase domain protein YP_004429600.1 KEGG: gfo:GFO_3022 thiol:disulfide interchange protein DsbD 2; PFAM: cytochrome c biogenesis protein transmembrane region YP_004429601.1 KEGG: fps:FP1626 tRNA(Ile)-lysidine synthase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein YP_004429602.1 KEGG: cat:CA2559_08321 hypothetical protein YP_004429603.1 KEGG: cat:CA2559_08311 propionyl-CoA carboxylase, beta subunit; PFAM: carboxyl transferase YP_004429604.1 KEGG: gfo:GFO_2366 sodium:alanine symporter family protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter YP_004429605.1 KEGG: zpr:ZPR_1841 DNA topoisomerase I-like protein YP_004429606.1 KEGG: zpr:ZPR_1837 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_004429607.1 PFAM: PhoH family protein; KEGG: cat:CA2559_08381 phosphate starvation-inducible PhoH-like protein YP_004429608.1 PFAM: protein of unknown function DUF62; KEGG: gfo:GFO_1910 hypothetical protein YP_004429609.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gfo:GFO_1911 hypothetical protein YP_004429610.1 KEGG: gfo:GFO_1951 AraC family transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004429611.1 PFAM: Haem oxygenase-like; KEGG: zpr:ZPR_2283 heme oxygenase YP_004429612.1 KEGG: cat:CA2559_00015 hypothetical protein YP_004429613.1 KEGG: zpr:ZPR_2282 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004429614.1 KEGG: hch:HCH_02559 FOG: CheY-like receiver; PFAM: response regulator receiver; SMART: response regulator receiver YP_004429615.1 KEGG: zpr:ZPR_2281 bacteriophytochrome; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein YP_004429616.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; histidine kinase A domain protein; KEGG: cat:CA2559_12648 signal transduction histidine kinase (STHK) with CheB and CheR activity; SMART: MCP methyltransferase CheR-type; PAS domain containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004429617.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: cat:CA2559_00020 DNA-directed RNA polymerase beta' subunit; SMART: RNA polymerase I subunit A domain protein YP_004429618.1 KEGG: cat:CA2559_00025 DNA-directed RNA polymerase beta subunit; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7 YP_004429619.1 KEGG: cat:CA2559_00030 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_004429620.1 PFAM: ribosomal protein L10; KEGG: gfo:GFO_2372 50S ribosomal protein L10 YP_004429621.1 KEGG: cat:CA2559_00040 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_004429622.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: cat:CA2559_00045 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_004429623.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: gfo:GFO_2375 transcription antitermination protein; SMART: NGN domain-containing protein; KOW domain protein YP_004429624.1 KEGG: zpr:ZPR_1162 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_004429625.1 KEGG: cat:CA2559_00060 translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_004429626.1 KEGG: zpr:ZPR_1155 sigma-54 modulation protein-like ribosome-associated protein YP_004429627.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: gfo:GFO_2386 tyrosine recombinase XerC YP_004429628.1 KEGG: cat:CA2559_00075 ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_004429629.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: cat:CA2559_00085 probable acyl-CoA dehydrogenase YP_004429630.1 manually curated; KEGG: zpr:ZPR_1151 helix-hairpin-helix DNA-binding protein YP_004429631.1 KEGG: cat:CA2559_00095 Na(+)-linked D-alanine glycine permease; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter YP_004429632.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein ; TrkA-C domain protein; KEGG: cat:CA2559_00100 potassium channel protein YP_004429633.1 KEGG: cat:CA2559_00105 hypothetical protein YP_004429634.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; RQC domain; HRDC domain protein; KEGG: zpr:ZPR_1135 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein YP_004429635.1 TIGRFAM: KpsF/GutQ family protein; KEGG: cat:CA2559_12348 sugar isomerase, KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_004429636.1 KEGG: gfo:GFO_0590 sec-independent protein translocase protein TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_004429637.1 KEGG: gfo:GFO_0589 carboxymuconolactone decarboxylase family protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004429639.1 KEGG: cat:CA2559_12363 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004429640.1 KEGG: gfo:GFO_3394 secreted PAP2 superfamily protein; manually curated; PFAM: phosphoesterase PA-phosphatase related YP_004429641.1 KEGG: cat:CA2559_04900 biopolymer transport protein YP_004429642.1 PFAM: histidine kinase internal region; KEGG: cat:CA2559_04905 two-component system sensor but no kinase domain YP_004429643.1 KEGG: cat:CA2559_04910 two-component system response regulator; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver YP_004429644.1 TIGRFAM: GTP cyclohydrolase I; KEGG: zpr:ZPR_3785 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004429645.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: gfo:GFO_2741 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_004429646.1 PFAM: protein of unknown function DUF37; KEGG: zpr:ZPR_3787 protein of unknown function DUF37 YP_004429647.1 KEGG: fjo:Fjoh_2266 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_004429648.1 PFAM: protein of unknown function DUF192; KEGG: gfo:GFO_2744 secreted protein containing DUF192 YP_004429649.1 KEGG: cat:CA2559_13553 hypothetical protein YP_004429650.1 KEGG: zpr:ZPR_1242 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_004429651.1 KEGG: zpr:ZPR_1241 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_004429652.1 KEGG: cat:CA2559_13568 competence-damage inducible; TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein YP_004429653.1 KEGG: gfo:GFO_2246 hypothetical protein YP_004429654.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: gfo:GFO_2247 fumarylacetoacetate hydrolase domain-containing protein YP_004429655.1 KEGG: cat:CA2559_13583 DNA polymerase III epsilon chain; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004429656.1 KEGG: fjo:Fjoh_2293 hypothetical protein YP_004429657.1 KEGG: cat:CA2559_13588 hypothetical protein YP_004429658.1 PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: cat:CA2559_07590 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex YP_004429659.1 PFAM: glycosyl transferase family 2; KEGG: cat:CA2559_07585 glycosyl transferase, group 2 family protein YP_004429660.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: fps:FP1300 recombination protein RecR; SMART: Toprim sub domain-containing protein YP_004429661.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: zpr:ZPR_3227 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004429662.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cat:CA2559_09533 oxidoreductase, Gfo/Idh/MocA family protein YP_004429663.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: cat:CA2559_09528 3-hydroxybutyryl-CoA dehydrogenase YP_004429664.1 PFAM: Uncharacterised conserved protein UCP033563; KEGG: cat:CA2559_09523 hypothetical protein YP_004429665.1 PFAM: alanine racemase domain protein; KEGG: zpr:ZPR_3232 alanine racemase YP_004429666.1 KEGG: cat:CA2559_09513 probable DNA-directed DNA polymerase III (epsilon subunit); PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; manually curated; TIGRFAM: DNA polymerase III, epsilon subunit; SMART: Exonuclease; Excinuclease ABC C subunit domain protein YP_004429667.1 PFAM: Ion transport protein; KEGG: cat:CA2559_09508 potassium channel protein YP_004429668.1 PFAM: tRNA isopentenyltransferase; manually curated; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: gfo:GFO_0660 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004429669.1 KEGG: cat:CA2559_09498 two-component system, transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004429670.1 KEGG: gfo:GFO_0657 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004429671.1 TIGRFAM: dephospho-CoA kinase; KEGG: gfo:GFO_0656 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_004429672.1 KEGG: zpr:ZPR_3240 YbbR-like protein YP_004429673.1 PFAM: glycosyl transferase family 2; KEGG: fjo:Fjoh_3463 glycosyl transferase family protein YP_004429674.1 KEGG: rbi:RB2501_16004 enoyl-[acyl-carrier-protein] reductase YP_004429675.1 KEGG: gfo:GFO_0652 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_004429676.1 KEGG: cat:CA2559_09458 hypothetical protein YP_004429677.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: fjo:Fjoh_3467 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_004429678.1 KEGG: zpr:ZPR_3246 hypothetical protein YP_004429679.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: cat:CA2559_09443 lipoprotein protein YP_004429680.1 KEGG: fjo:Fjoh_3470 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004429681.1 KEGG: cat:CA2559_09433 hypothetical protein YP_004429682.1 PFAM: 5'-Nucleotidase domain-containing protein; KEGG: gfo:GFO_0644 secreted or periplasmic 5'-nucleotidase YP_004429683.1 PFAM: metallophosphoesterase; KEGG: gfo:GFO_0643 secreted or periplasmic 5'-nucleotidase YP_004429684.1 KEGG: cje:Cj0378c ferric reductase-like transmembrane protein. functional classification-membranes,lipoproteins and porins YP_004429685.1 KEGG: sso:SSO2702 hypothetical protein YP_004429686.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: gfo:GFO_0640 DNA ligase; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein YP_004429687.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: cat:CA2559_09413 hypothetical protein YP_004429688.1 KEGG: fps:FP2023 methylase of polypeptide chain release factors; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004429689.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fjo:Fjoh_5056 GCN5-related N-acetyltransferase YP_004429690.1 manually curated; TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: cat:CA2559_12713 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_004429691.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gfo:GFO_0633 hypothetical protein YP_004429692.1 KEGG: mhp:MHP7448_0366 lipoprotein YP_004429693.1 KEGG: fps:FP1134 sugar phosphate nucleotydyl transferase YP_004429694.1 KEGG: fjo:Fjoh_0193 hypothetical protein YP_004429695.1 KEGG: zpr:ZPR_3074 hypothetical protein YP_004429696.1 KEGG: gfo:GFO_0993 hypothetical protein YP_004429697.1 PFAM: transcriptional regulator PadR family protein; KEGG: gfo:GFO_0992 PadR-like family transcriptional regulator protein YP_004429698.1 PFAM: PspC domain protein; KEGG: gfo:GFO_0991 PspC domain-containing protein YP_004429699.1 KEGG: rbi:RB2501_00746 hypothetical protein YP_004429700.1 KEGG: gfo:GFO_3458 secreted protein YP_004429701.1 KEGG: cat:CA2559_09553 hypothetical protein YP_004429702.1 KEGG: gfo:GFO_2642 HTH_3 family transcriptional regulator protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004429703.1 KEGG: gfo:GFO_2641 hypothetical protein YP_004429704.1 PFAM: PspA/IM30 family protein; KEGG: gfo:GFO_2640 PspA/IM30 family protein YP_004429705.1 KEGG: gfo:GFO_2639 membrane protein YP_004429706.1 PFAM: band 7 protein; KEGG: gfo:GFO_2638 hypothetical protein YP_004429707.1 SMART: AAA ATPase; KEGG: gfo:GFO_2637 hypothetical protein YP_004429708.1 KEGG: cjr:CJE1559 GlnD family protein YP_004429709.1 KEGG: fjo:Fjoh_0199 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004429710.1 KEGG: zpr:ZPR_1474 glucose/sorbosone dehydrogenase YP_004429711.1 PFAM: cytochrome c class I; KEGG: cat:CA2559_12333 probable major anaerobically induced outer membrane transmembrane protein YP_004429712.1 KEGG: fps:FP1131 chromosome partitioning protein ParA YP_004429713.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: gfo:GFO_0805 ParB-like chromosome partition protein; SMART: ParB domain protein nuclease YP_004429714.1 KEGG: gfo:GFO_0804 hypothetical protein YP_004429715.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: cat:CA2559_07100 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_004429716.1 KEGG: gfo:GFO_0802 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_004429717.1 PFAM: WbqC-like family protein; KEGG: cat:CA2559_07090 hypothetical protein YP_004429718.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gfo:GFO_0800 hypothetical protein YP_004429719.1 PFAM: Rhomboid family protein; KEGG: gfo:GFO_0799 transmembrane rhomboid family protein YP_004429720.1 PFAM: Rhomboid family protein; KEGG: cat:CA2559_07075 rhomboid family protein YP_004429721.1 KEGG: zpr:ZPR_1458 DNA mismatch repair protein MutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_004429722.1 KEGG: cat:CA2559_07065 hypothetical protein YP_004429723.1 KEGG: gfo:GFO_0795 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_004429724.1 KEGG: cat:CA2559_09778 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004429725.1 KEGG: zpr:ZPR_1454 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_004429726.1 KEGG: gfo:GFO_0792 hypothetical protein YP_004429727.1 PFAM: protein of unknown function DUF721; KEGG: cat:CA2559_10803 hypothetical protein YP_004429728.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: cat:CA2559_05910 arginyl-tRNA synthetase YP_004429729.1 KEGG: cat:CA2559_05905 hypothetical protein YP_004429730.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cat:CA2559_05895 hypothetical protein YP_004429731.1 KEGG: cat:CA2559_05890 hypothetical protein YP_004429732.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: cpi:Cpin_6573 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004429733.1 PFAM: cation transporter; KEGG: gfo:GFO_0390 trk system potassium uptake protein YP_004429734.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: cat:CA2559_12243 potassium uptake protein YP_004429735.1 KEGG: fjo:Fjoh_1467 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004429736.1 KEGG: cat:CA2559_12253 PorT protein YP_004429737.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: fps:FP0325 tRNA/rRNA methyltransferase YP_004429738.1 PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: cat:CA2559_12263 hypothetical protein YP_004429739.1 KEGG: gfo:GFO_2345 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004429740.1 KEGG: gfo:GFO_0384 fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_004429741.1 KEGG: cat:CA2559_12273 acetyl-CoA carboxylase, carboxyl transferase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase YP_004429742.1 PFAM: Polyprenyl synthetase; KEGG: gfo:GFO_0354 polyprenyl synthetase YP_004429743.1 KEGG: cat:CA2559_07736 hypothetical protein; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_004429744.1 KEGG: mxa:MXAN_0256 aminotransferase, class V; manually curated; PFAM: aminotransferase class V YP_004429745.1 PFAM: isocitrate lyase and phosphorylmutase; KEGG: cat:CA2559_12313 isocitrate lyase YP_004429746.1 TIGRFAM: malate synthase A; KEGG: cat:CA2559_12308 malate synthase; PFAM: Malate synthase family protein YP_004429747.1 KEGG: cat:CA2559_12303 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004429748.1 KEGG: cat:CA2559_07741 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_004429749.1 KEGG: fjo:Fjoh_0508 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004429750.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: cat:CA2559_07756 hypothetical protein YP_004429751.1 PFAM: transglutaminase domain-containing protein; KEGG: cat:CA2559_06980 hypothetical protein YP_004429752.1 KEGG: cat:CA2559_06975 hypothetical protein YP_004429753.1 KEGG: fjo:Fjoh_0511 hypothetical protein YP_004429754.1 KEGG: dfe:Dfer_5755 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004429755.1 KEGG: zpr:ZPR_3523 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_004429756.1 KEGG: gfo:GFO_0344 secreted protein YP_004429757.1 KEGG: cat:CA2559_07385 chorismate mutase; PFAM: DAHP synthetase I/KDSA; Chorismate mutase, type II YP_004429758.1 PFAM: Prephenate dehydrogenase; KEGG: fjo:Fjoh_0515 prephenate dehydrogenase YP_004429759.1 PFAM: aminotransferase class I and II; KEGG: fjo:Fjoh_0516 aminotransferase, class I and II YP_004429760.1 KEGG: fjo:Fjoh_0517 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein YP_004429762.1 TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA; PFAM: ABC transporter related; KEGG: zpr:ZPR_3620 gliding motility protein GldA; SMART: AAA ATPase YP_004429763.1 PFAM: rhodopsin; KEGG: tra:Trad_2944 rhodopsin YP_004429764.1 KEGG: gfo:GFO_0382 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_004429765.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: cat:CA2559_12288 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_004429766.1 KEGG: swd:Swoo_4747 methionine sulfoxide reductase A YP_004429767.1 KEGG: fps:FP0855 two-component system response regulatory protein YP_004429768.1 KEGG: fps:FP0856 two-component system sensor histidine kinase YP_004429769.1 KEGG: mmh:Mmah_0474 hypothetical protein YP_004429770.1 KEGG: cpi:Cpin_2480 hypothetical protein YP_004429771.1 KEGG: cac:CA_C0781 hypothetical protein YP_004429772.1 KEGG: coc:Coch_2082 hypothetical protein YP_004429773.1 KEGG: sdn:Sden_2333 hypothetical protein YP_004429774.1 PFAM: Abortive infection protein; KEGG: gfo:GFO_0014 metal-dependent membrane protease YP_004429775.1 PFAM: monooxygenase FAD-binding; KEGG: mmw:Mmwyl1_1886 monooxygenase FAD-binding YP_004429776.1 KEGG: gfo:GFO_2579 hypothetical protein YP_004429777.1 KEGG: cat:CA2559_00475 transcriptional regulator, ArsR family protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004429778.1 KEGG: cat:CA2559_00480 hypothetical protein YP_004429779.1 KEGG: fjo:Fjoh_3082 protein tyrosine phosphatase YP_004429780.1 KEGG: cat:CA2559_00490 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter YP_004429781.1 KEGG: vsp:VS_II0417 MutT/NUDIX protein; manually curated; PFAM: NUDIX hydrolase YP_004429782.1 KEGG: afw:Anae109_3871 hypothetical protein YP_004429783.1 KEGG: pam:PANA_3966 GdhA YP_004429784.1 KEGG: fjo:Fjoh_5045 hypothetical protein YP_004429785.1 KEGG: bth:BT_1061 hypothetical protein YP_004429786.1 KEGG: cat:CA2559_07610 Zn-dependent aminopeptidase YP_004429787.1 KEGG: cat:CA2559_07615 hypothetical protein YP_004429788.1 KEGG: cat:CA2559_09688 hypothetical protein YP_004429789.1 KEGG: cat:CA2559_09688 hypothetical protein YP_004429790.1 KEGG: gfo:GFO_2728 hypothetical protein YP_004429791.1 KEGG: fjo:Fjoh_1768 peptidase E; PFAM: peptidase S51 dipeptidase E YP_004429792.1 KEGG: rbi:RB2501_02025 hypothetical protein YP_004429793.1 PFAM: Collagen triple helix repeat-containing protein; KEGG: dae:Dtox_3124 collagen triple helix repeat protein YP_004429794.1 KEGG: rbi:RB2501_02545 hypothetical protein YP_004429795.1 KEGG: str:Sterm_2290 outer membrane autotransporter barrel domain protein YP_004429796.1 KEGG: rbi:RB2501_02550 hypothetical protein YP_004429797.1 KEGG: gfo:GFO_0417 hypothetical protein YP_004429798.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fba:FIC_01242 GCN5-related N-acetyltransferase YP_004429799.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: cat:CA2559_09648 D-alanyl-D-alanine carboxypeptidase YP_004429800.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cat:CA2559_05590 hypothetical protein YP_004429801.1 KEGG: gfo:GFO_2866 hypothetical protein YP_004429802.1 KEGG: gfo:GFO_2867 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_004429803.1 KEGG: cat:CA2559_05570 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; phosphoribosyltransferase YP_004429804.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: fjo:Fjoh_0425 phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004429805.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: zpr:ZPR_3904 phosphoribosylaminoimidazole carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004429806.1 KEGG: zpr:ZPR_3906 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_004429807.1 PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_1550 glycosyl transferase, group 1 YP_004429808.1 KEGG: fjo:Fjoh_0439 transcriptional regulators-like protein YP_004429809.1 KEGG: cpe:CPE0503 hypothetical protein YP_004429810.1 KEGG: fjo:Fjoh_0441 hypothetical protein YP_004429811.1 KEGG: fjo:Fjoh_0442 hypothetical protein YP_004429812.1 PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: fjo:Fjoh_0443 hypothetical protein YP_004429813.1 KEGG: zpr:ZPR_3907 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004429814.1 KEGG: cat:CA2559_07630 glycine dehydrogenase YP_004429815.1 KEGG: gfo:GFO_2874 membrane protein YP_004429816.1 KEGG: cat:CA2559_07640 glycine cleavage system protein P; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like YP_004429817.1 KEGG: fjo:Fjoh_0446 beta-ketoacyl-acyl-carrier-protein synthase I; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein YP_004429818.1 KEGG: cat:CA2559_07650 hypothetical protein YP_004429819.1 PFAM: glycosyl transferase family 2; KEGG: fjo:Fjoh_0448 glycosyl transferase family protein YP_004429820.1 KEGG: zpr:ZPR_1965 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase YP_004429821.1 PFAM: protein of unknown function DUF140; KEGG: gfo:GFO_2881 ABC-type transporter permease protein YP_004429822.1 KEGG: cat:CA2559_07670 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004429823.1 PFAM: protein of unknown function DUF389; KEGG: cat:CA2559_05430 integral membrane protein YP_004429824.1 KEGG: cat:CA2559_05435 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase YP_004429825.1 KEGG: fps:FP1382 hypothetical protein YP_004429826.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rbi:RB2501_09655 short-chain dehydrogenase/reductase SDR:glucose/ribitol dehydrogenase YP_004429827.1 PFAM: peptidase M28; KEGG: gfo:GFO_2887 M28 family peptidase YP_004429828.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; KEGG: cat:CA2559_05450 dihydrolipoamide acetyltransferase component (E2) of pyruvatedehydrogenase complex; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004429829.1 TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; KEGG: cat:CA2559_05455 pyruvate dehydrogenase complex, E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_004429830.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cat:CA2559_05460 cytidine deaminase YP_004429831.1 KEGG: rbi:RB2501_09630 hypothetical protein YP_004429832.1 KEGG: cat:CA2559_05470 hypothetical protein YP_004429833.1 KEGG: cat:CA2559_05475 lipoprotein, TIGRFAM: gliding motility-associated lipoprotein GldJ; PFAM: protein of unknown function DUF323 YP_004429834.1 KEGG: cat:CA2559_05480 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D -alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004429835.1 KEGG: amt:Amet_0557 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; FAD dependent oxidoreductase YP_004429836.1 KEGG: gfo:GFO_2149 symporter YidK; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004429837.1 KEGG: rbi:RB2501_03910 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004429838.1 KEGG: sfr:Sfri_0512 hypothetical protein YP_004429839.1 PFAM: regulatory protein TetR; KEGG: cat:CA2559_06485 hypothetical protein YP_004429840.1 KEGG: cat:CA2559_06480 HlyB/MsbA family ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004429841.1 KEGG: cat:CA2559_06475 hypothetical protein YP_004429842.1 KEGG: cat:CA2559_06470 hypothetical protein YP_004429843.1 KEGG: smt:Smal_1028 hypothetical protein YP_004429844.1 KEGG: mmr:Mmar10_2631 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004429845.1 KEGG: cbb:CLD_1694 transcriptional regulator YP_004429846.1 PFAM: Mur ligase middle domain protein; manually curated; KEGG: fjo:Fjoh_0461 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein YP_004429847.1 manually curated; KEGG: cat:CA2559_06650 hypothetical protein YP_004429848.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cat:CA2559_06645 tansport related protein YP_004429849.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: cat:CA2559_06640 biopolymer transport protein YP_004429850.1 PFAM: Citrate transporter; KEGG: cat:CA2559_06635 probable Na+/H+ antiporter YP_004429851.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: cat:CA2559_06630 Glu/Leu/Phe/Val dehydrogenase family protein YP_004429852.1 PFAM: protein of unknown function UPF0075; KEGG: fps:FP1927 anhydro-N-acetylmuramic acid kinase YP_004429853.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: cat:CA2559_06620 butyryl-CoA dehydrogenase YP_004429854.1 KEGG: cat:CA2559_00665 endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A YP_004429855.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cat:CA2559_04845 oligopeptide ABC transporter permease YP_004429856.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: gfo:GFO_2963 tail-specific protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein YP_004429857.1 KEGG: cat:CA2559_04835 stationary-phase survival acid phosphatase; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_004429858.1 KEGG: rbi:RB2501_08890 hypothetical protein YP_004429859.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: cat:CA2559_04825 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_004429860.1 PFAM: NLP/P60 protein; KEGG: gfo:GFO_2967 NlpC/P60 family protein YP_004429861.1 KEGG: cat:CA2559_04815 competence protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_004429862.1 KEGG: cat:CA2559_04810 hypothetical protein YP_004429863.1 KEGG: cat:CA2559_04805 proton/peptide symporter family protein; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_004429864.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: cat:CA2559_04800 dipeptidyl aminopeptidase IV YP_004429865.1 KEGG: cat:CA2559_04185 3-hydroxy-3-methylglutaryl-coenzyme A reductase; TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative YP_004429866.1 KEGG: cat:CA2559_04190 hypothetical protein YP_004429867.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gfo:GFO_2975 PpiC-type secreted peptidyl-prolyl cis-trans isomerase YP_004429868.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: gfo:GFO_2976 hypothetical protein YP_004429869.1 KEGG: rbi:RB2501_08840 hypothetical protein YP_004429870.1 PFAM: protein of unknown function DUF1239; KEGG: gfo:GFO_2978 hypothetical protein YP_004429871.1 KEGG: cat:CA2559_04215 TPR domain protein YP_004429872.1 KEGG: cat:CA2559_04220 outer membrane protein YP_004429873.1 KEGG: fjo:Fjoh_1411 pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor YP_004429874.1 PFAM: protein of unknown function DUF980; KEGG: zpr:ZPR_3368 hypothetical protein YP_004429875.1 PFAM: Carboxylesterase type B; KEGG: gfo:GFO_2628 carboxylesterase YP_004429876.1 KEGG: sma:SAV_3785 hypothetical protein YP_004429877.1 KEGG: rmr:Rmar_0474 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_004429878.1 KEGG: cat:CA2559_05040 carboxymuconolactone decarboxylase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004429879.1 PFAM: Radical SAM domain protein; KEGG: cat:CA2559_05035 hypothetical protein YP_004429880.1 PFAM: Protein of unknown function DUF2064; KEGG: cat:CA2559_04160 hypothetical protein YP_004429881.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cat:CA2559_04165 outer membrane protein YP_004429882.1 KEGG: cat:CA2559_04170 hypothetical protein YP_004429883.1 KEGG: cat:CA2559_04175 hypothetical protein YP_004429884.1 KEGG: cat:CA2559_04180 hypothetical protein YP_004429885.1 KEGG: cat:CA2559_05030 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004429886.1 KEGG: gbe:GbCGDNIH1_0097 cobalt-zinc-cadmium resistance protein CzcD YP_004429887.1 KEGG: clj:CLJU_c05240 membrane protein with a O-antigen polymerase related domain YP_004429888.1 PFAM: Protein of unknown function DUF2064; KEGG: cat:CA2559_05025 hypothetical protein YP_004429889.1 KEGG: cat:CA2559_05020 purine nucleoside phosphorylase; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1 YP_004429890.1 PFAM: Methyltransferase type 11; KEGG: cat:CA2559_05015 hypothetical protein YP_004429891.1 PFAM: fatty acid hydroxylase; KEGG: cat:CA2559_05005 probable transmembrane protein YP_004429892.1 PFAM: protein of unknown function DUF547; KEGG: rbi:RB2501_08750 hypothetical protein YP_004429893.1 PFAM: protein of unknown function DUF547; KEGG: cat:CA2559_05000 hypothetical protein YP_004429894.1 PFAM: glycosyl transferase family 2; KEGG: cat:CA2559_04995 glycosyl transferase YP_004429895.1 PFAM: nitroreductase; KEGG: coc:Coch_0484 nitroreductase YP_004429896.1 KEGG: cat:CA2559_06035 lipoprotein YP_004429897.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: cat:CA2559_06030 hypothetical protein YP_004429898.1 PFAM: protein of unknown function UPF0057; KEGG: cat:CA2559_02650 hypothetical protein YP_004429899.1 KEGG: gfo:GFO_2345 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_004429900.1 KEGG: nve:NEMVE_v1g222495 hypothetical protein YP_004429901.1 KEGG: nve:NEMVE_v1g222495 hypothetical protein; manually curated; PFAM: surface antigen variable number repeat-containing protein YP_004429902.1 KEGG: rbi:RB2501_08740 hypothetical protein YP_004429903.1 KEGG: tan:TA04875 ubiquitin carboxyl-terminal hydrolase YP_004429904.1 PFAM: protein of unknown function DUF547; KEGG: cat:CA2559_01395 hypothetical protein YP_004429905.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rbi:RB2501_08735 NADH oxidase YP_004429906.1 KEGG: zpr:ZPR_4197 iron-sulfur binding transmembrane protein YP_004429907.1 KEGG: coc:Coch_0194 hypothetical protein YP_004429908.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cpi:Cpin_2433 GCN5-related N-acetyltransferase YP_004429909.1 KEGG: sli:Slin_3373 DinB family protein YP_004429910.1 KEGG: sma:SAV_6018 hypothetical protein YP_004429911.1 PFAM: Protein of unknown function DUF2219; KEGG: gfo:GFO_3488 hypothetical protein YP_004429912.1 KEGG: fjo:Fjoh_2153 hypothetical protein YP_004429913.1 KEGG: gfo:GFO_3345 biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_004429914.1 KEGG: zpr:ZPR_4621 biotin carboxyl carrier protein of acetyl-CoA carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_004429915.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: fps:FP2379 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein YP_004429916.1 KEGG: zpr:ZPR_4623 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_004429917.1 PFAM: protein of unknown function DUF177; KEGG: zpr:ZPR_4624 hypothetical protein YP_004429918.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: cat:CA2559_02330 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_004429919.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: fps:FP2383 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_004429920.1 KEGG: gfo:GFO_3337 membrane protein YP_004429921.1 KEGG: rbi:RB2501_07035 lactoylglutathione lyase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004429922.1 KEGG: zpr:ZPR_4690 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_004429923.1 PFAM: protein of unknown function DUF214; KEGG: cat:CA2559_03295 lipoprotein releasing system transmembrane protein YP_004429924.1 KEGG: cat:CA2559_03215 TIM-barrel enzyme, possible dehydrogenase; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS YP_004429925.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rbi:RB2501_07015 hypothetical protein YP_004429926.1 KEGG: zpr:ZPR_0002 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004429927.1 PFAM: CutC family protein; KEGG: coc:Coch_2068 CutC family protein YP_004429928.1 KEGG: cat:CA2559_08711 alpha-1,2-mannosidase precursor; TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; coagulation factor 5/8 type domain protein YP_004429929.1 KEGG: vco:VC0395_0562 thiosulfate sulfurtransferase SseA; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004429930.1 KEGG: cat:CA2559_08716 asparaginase; PFAM: peptidase T2 asparaginase 2 YP_004429932.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: cat:CA2559_02590 DNA polymerase I; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease YP_004429933.1 KEGG: cat:CA2559_04090 hypothetical protein YP_004429934.1 KEGG: cat:CA2559_02580 hypothetical protein YP_004429935.1 KEGG: gfo:GFO_0138 secreted protein YP_004429936.1 KEGG: zpr:ZPR_0516 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_004429937.1 PFAM: ribosomal protein S9; KEGG: cat:CA2559_04080 30S ribosomal protein S9 YP_004429938.1 KEGG: zpr:ZPR_0514 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_004429939.1 KEGG: cat:CA2559_04070 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_004429940.1 KEGG: lic:LIC20121 histidinol-phosphate aminotransferase and cobyric acid synthase YP_004429941.1 KEGG: tgu:100231710 hypothetical protein LOC100231710 YP_004429942.1 KEGG: cgr:CAGL0E06688g hypothetical protein YP_004429943.1 KEGG: cbb:CLD_2945 hypothetical protein YP_004429944.1 TIGRFAM: uridylate kinase; KEGG: cat:CA2559_04055 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004429945.1 KEGG: cat:CA2559_04050 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_004429946.1 KEGG: cat:CA2559_04045 hypothetical protein YP_004429947.1 KEGG: gfo:GFO_0097 hypothetical protein YP_004429948.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rbi:RB2501_12482 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein YP_004429949.1 KEGG: cat:CA2559_02730 asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004429950.1 KEGG: rbi:RB2501_10557 hypothetical protein YP_004429951.1 KEGG: fjo:Fjoh_2971 hypothetical protein YP_004429952.1 KEGG: rbi:RB2501_10557 hypothetical protein YP_004429953.1 KEGG: fjo:Fjoh_2971 hypothetical protein YP_004429954.1 KEGG: fjo:Fjoh_2971 hypothetical protein YP_004429955.1 KEGG: cpi:Cpin_1558 hypothetical protein YP_004429956.1 PFAM: ATP-binding region ATPase domain protein; KEGG: gfo:GFO_2118 two-component system sensor histidine kinase YP_004429957.1 KEGG: gfo:GFO_2117 two-component system response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004429958.1 PFAM: Domain of unknown function DUF1801; KEGG: cat:CA2559_00195 hypothetical protein YP_004429959.1 PFAM: Na+/solute symporter; KEGG: rbi:RB2501_07330 sodium/glucose cotransporter YP_004429960.1 KEGG: dre:554886 peptidylprolyl isomerase (cyclophilin)-like 4 YP_004429961.1 PFAM: Glutaminase, core; manually curated; KEGG: coc:Coch_0977 glutaminase; TIGRFAM: Glutaminase, core YP_004429962.1 KEGG: gfo:GFO_2556 hypothetical protein YP_004429963.1 KEGG: fjo:Fjoh_0117 hypothetical protein YP_004429964.1 KEGG: gfo:GFO_2557 hypothetical protein YP_004429965.1 KEGG: fjo:Fjoh_3516 hypothetical protein YP_004429966.1 KEGG: phe:Phep_3016 hypothetical protein YP_004429967.1 KEGG: phe:Phep_3015 hypothetical protein YP_004429968.1 PFAM: protein of unknown function DUF1361; KEGG: gfo:GFO_2561 hypothetical protein YP_004429969.1 KEGG: bth:BT_4485 hypothetical protein YP_004429970.1 PFAM: protein of unknown function DUF752; KEGG: zpr:ZPR_3125 hypothetical protein YP_004429971.1 KEGG: zpr:ZPR_3126 hypothetical protein YP_004429972.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: cat:CA2559_07060 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_004429973.1 PFAM: peptidase M48 Ste24p; KEGG: rbi:RB2501_02560 hypothetical protein YP_004429974.1 PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; manually curated; KEGG: fjo:Fjoh_1764 phosphoglyceromutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YP_004429975.1 KEGG: rbi:RB2501_02580 hypothetical protein YP_004429976.1 KEGG: rbi:RB2501_02580 hypothetical protein YP_004429977.1 PFAM: protein of unknown function DUF805; KEGG: cte:CT1580 aminopeptidase C YP_004429978.1 manually curated; KEGG: zpr:ZPR_0959 hydrolase-like protein YP_004429979.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: zpr:ZPR_0958 methionine aminopeptidase; PFAM: peptidase M24 YP_004429980.1 KEGG: fjo:Fjoh_1761 methyltransferase type 11; manually curated; PFAM: Methyltransferase type 11 YP_004429981.1 PFAM: ApbE family lipoprotein; KEGG: cat:CA2559_12123 thiamine biosynthesis lipoprotein ApbE precursor YP_004429982.1 KEGG: cat:CA2559_12128 Na(+)-translocating NADH-quinone reductase subunit F YP_004429983.1 KEGG: cat:CA2559_12138 NADH:ubiquinone oxidoreductase, Na translocating, F subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit F; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; Oxidoreductase FAD-binding domain protein YP_004429984.1 KEGG: rbi:RB2501_02610 NADH:ubiquinone oxidoreductase, Na translocating, E subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit E; PFAM: RnfA-Nqr electron transport subunit YP_004429985.1 KEGG: cat:CA2559_12148 NADH-ubiquinone oxidoreductase; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit D; PFAM: RnfA-Nqr electron transport subunit YP_004429986.1 KEGG: rbi:RB2501_02620 Na(+)-translocating NADH-quinone reductase subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit C; PFAM: FMN-binding domain protein YP_004429987.1 KEGG: cat:CA2559_12158 Na(+)-translocating NADH-quinone reductase subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit B; PFAM: NQR2 and RnfD family protein YP_004429988.1 KEGG: cat:CA2559_12163 Na(+)-translocating NADH-quinone reductase subunit A; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A YP_004429989.1 KEGG: gfo:GFO_0399 hypothetical protein YP_004429990.1 manually curated; KEGG: gfo:GFO_0398 hypothetical protein YP_004429991.1 PFAM: ApaG domain protein; KEGG: zpr:ZPR_0945 hypothetical protein YP_004429992.1 KEGG: cat:CA2559_12183 hypothetical protein YP_004429993.1 KEGG: cat:CA2559_12188 hypothetical protein YP_004429994.1 KEGG: fps:FP0415 1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004429995.1 TIGRFAM: sulfate adenylyltransferase, large subunit; KEGG: fjo:Fjoh_1503 sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004429996.1 TIGRFAM: sulfate adenylyltransferase, small subunit; KEGG: fjo:Fjoh_1502 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase YP_004429997.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: rbi:RB2501_03135 possible 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase YP_004429998.1 PFAM: Protein of unknown function DUF2061, membrane; KEGG: gfo:GFO_0322 hypothetical protein YP_004429999.1 KEGG: cat:CA2559_05995 transcriptional regulator, BadM/Rrf2 family protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004430000.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: bpi:BPLAN_195 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_004430001.1 TIGRFAM: methionine synthase; KEGG: zpr:ZPR_3625 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Vitamin B12 dependent methionine synthase activation region; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein YP_004430002.1 PFAM: homocysteine S-methyltransferase; KEGG: zpr:ZPR_3626 methionine synthase-like protein YP_004430003.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rbi:RB2501_03145 O-succinylhomoserine sulfhydrylase YP_004430004.1 KEGG: gfo:GFO_0318 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding YP_004430005.1 PFAM: alpha/beta hydrolase fold; KEGG: cat:CA2559_05985 homoserine O-acetyltransferase YP_004430006.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: cat:CA2559_05980 O-acetylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004430007.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: fjo:Fjoh_1489 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_004430008.1 PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: noc:Noc_2695 hypothetical protein YP_004430009.1 KEGG: cat:CA2559_10578 hypothetical protein YP_004430010.1 PFAM: Protein of unknown function, Porph ging; KEGG: cat:CA2559_10573 hypothetical protein YP_004430011.1 PFAM: Protein of unknown function, Porph ging; KEGG: fjo:Fjoh_1484 hypothetical protein YP_004430012.1 KEGG: tet:TTHERM_00616200 hypothetical protein YP_004430013.1 KEGG: cpi:Cpin_0694 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004430014.1 KEGG: cpi:Cpin_0693 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004430015.1 KEGG: rbi:RB2501_10787 hypothetical protein YP_004430016.1 KEGG: cat:CA2559_05955 hypothetical protein YP_004430017.1 PFAM: deoxynucleoside kinase; KEGG: gfo:GFO_0303 deoxyadenosine kinase YP_004430018.1 KEGG: cat:CA2559_09543 hypothetical protein YP_004430019.1 PFAM: Protein of unknown function DUF2183; KEGG: cat:CA2559_05945 hypothetical protein YP_004430020.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cat:CA2559_01275 hypothetical protein YP_004430021.1 TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: cat:CA2559_05940 inorganic H+ pyrophosphatase; PFAM: Inorganic H pyrophosphatase YP_004430022.1 KEGG: cat:CA2559_05935 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_004430023.1 KEGG: cat:CA2559_13268 hypothetical protein YP_004430024.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: gfo:GFO_0294 pyruvate dehydrogenase E1 component subunit beta YP_004430025.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: cat:CA2559_13278 electron transfer flavoprotein (beta subunit) YP_004430026.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: gfo:GFO_0292 electron transfer flavoprotein subunit alpha YP_004430027.1 PFAM: protein of unknown function DUF151; UvrB/UvrC protein; KEGG: zpr:ZPR_3661 hypothetical protein YP_004430028.1 PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: gfo:GFO_0290 Na+ dependent nucleoside transporter YP_004430029.1 KEGG: rbi:RB2501_12447 hypothetical protein YP_004430030.1 TIGRFAM: thymidylate synthase; KEGG: gfo:GFO_0288 thymidylate synthase; PFAM: thymidylate synthase YP_004430031.1 KEGG: cat:CA2559_13313 TonB YP_004430032.1 KEGG: cat:CA2559_07981 TonB YP_004430033.1 PFAM: protein of unknown function DUF323; KEGG: zpr:ZPR_3668 hypothetical protein YP_004430034.1 PFAM: Protein of unknown function DUF2260; KEGG: cat:CA2559_13323 hypothetical protein YP_004430035.1 PFAM: protein of unknown function DUF427; KEGG: sli:Slin_0315 protein of unknown function DUF427 YP_004430036.1 PFAM: glycoside hydrolase family 13 domain protein; KEGG: rbi:RB2501_03230 isoamylase protein-like protein YP_004430037.1 PFAM: aminotransferase class V; KEGG: zpr:ZPR_3672 class-V aminotransferase YP_004430038.1 KEGG: cat:CA2559_13343 hypothetical protein YP_004430039.1 PFAM: dihydrofolate reductase region; KEGG: cat:CA2559_13348 dihydrofolate reductase YP_004430040.1 KEGG: gfo:GFO_0276 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_004430041.1 KEGG: dya:Dyak_GE10869 GE10869 gene product from transcript GE10869-RA YP_004430042.1 KEGG: gfo:GFO_0270 HTH_3 family transcriptional regulator protein; PFAM: helix-turn-helix domain protein; Peptidase S24/S26A/S26B, conserved region; SMART: helix-turn-helix domain protein YP_004430043.1 KEGG: gfo:GFO_0988 membrane or secreted protein YP_004430044.1 KEGG: cat:CA2559_13393 hypothetical protein YP_004430045.1 KEGG: cat:CA2559_13388 hypothetical protein YP_004430046.1 PFAM: Conserved hypothetical protein CHP02453; KEGG: gfo:GFO_0463 hypothetical protein YP_004430047.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; KEGG: gfo:GFO_0273 3-deoxy-D-manno-octulosonic-acid transferase YP_004430048.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cat:CA2559_13373 pigmentation and extracellular proteinase regulator YP_004430049.1 PFAM: amidohydrolase; KEGG: gfo:GFO_0275 amidohydrolase family protein YP_004430050.1 PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; KEGG: cat:CA2559_13643 OmpA family protein YP_004430051.1 TIGRFAM: membrane protein; KEGG: cat:CA2559_13648 hypothetical protein YP_004430052.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Thrombospondin type 3 repeat-containing protein; KEGG: ter:Tery_3470 hemolysin-type calcium-binding region; SMART: Immunoglobulin subtype YP_004430053.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: zpr:ZPR_0151 protein containing GIY-YIG catalytic domain YP_004430054.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: cat:CA2559_05155 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_004430055.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: gfo:GFO_3580 TonB-dependent outer membrane receptor YP_004430056.1 PFAM: RagB/SusD domain protein; KEGG: gfo:GFO_3581 SusD/RagB family protein YP_004430057.1 PFAM: acriflavin resistance protein; KEGG: cat:CA2559_01960 multidrug resistance protein YP_004430058.1 KEGG: cat:CA2559_01965 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004430059.1 PFAM: outer membrane efflux protein; KEGG: cat:CA2559_01970 outer membrane efflux protein YP_004430060.1 PFAM: regulatory protein TetR; KEGG: cat:CA2559_01975 hypothetical protein YP_004430061.1 PFAM: Polyprenyl synthetase; KEGG: cat:CA2559_01980 isoprenoid biosynthesis related protein YP_004430062.1 KEGG: cat:CA2559_08086 hypothetical protein YP_004430063.1 PFAM: Spore coat protein CotH; KEGG: bth:BT_3500 hypothetical protein YP_004430064.1 KEGG: cat:CA2559_04865 deoxynucleoside kinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; deoxynucleoside kinase YP_004430065.1 KEGG: gfo:GFO_0245 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165 YP_004430066.1 KEGG: cat:CA2559_04855 outer membrane assembly protein YP_004430067.1 PFAM: Patatin; KEGG: gfo:GFO_2329 patatin-like phospholipase YP_004430068.1 KEGG: cat:CA2559_03085 hypothetical protein YP_004430069.1 KEGG: cpi:Cpin_5063 hypothetical protein YP_004430070.1 KEGG: zpr:ZPR_0780 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004430071.1 KEGG: cat:CA2559_04850 hypothetical protein YP_004430072.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cat:CA2559_04850 hypothetical protein YP_004430073.1 KEGG: cat:CA2559_00660 hypothetical protein YP_004430074.1 PFAM: GH3 auxin-responsive promoter; KEGG: zpr:ZPR_0799 hypothetical protein YP_004430075.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: cat:CA2559_04375 ATP-dependent protease ATP-binding subunit; SMART: AAA ATPase YP_004430076.1 KEGG: cat:CA2559_04370 ATP-dependent Clp protease proteolytic subunit 2; PFAM: peptidase S14 ClpP YP_004430077.1 KEGG: zpr:ZPR_0628 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein YP_004430078.1 PFAM: membrane protein of unknown function; KEGG: cat:CA2559_04360 hypothetical protein YP_004430079.1 KEGG: cat:CA2559_04355 hypothetical protein YP_004430080.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cat:CA2559_04350 outer membrane protein P1 YP_004430081.1 PFAM: alpha/beta hydrolase fold; KEGG: cat:CA2559_04345 alpha/beta superfamily hydrolase YP_004430082.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: fjo:Fjoh_1695 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ YP_004430083.1 PFAM: CBS domain containing protein; KEGG: cat:CA2559_04335 pyridoxal phosphate biosynthetic protein YP_004430084.1 PFAM: ATP-NAD/AcoX kinase; KEGG: cat:CA2559_04330 ATP-NAD kinase YP_004430085.1 KEGG: cat:CA2559_04325 inorganic polyphosphate/ATP-NAD kinase YP_004430086.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: cat:CA2559_04320 undecaprenyl pyrophosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_004430087.1 KEGG: cat:CA2559_04315 outer membrane protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_004430088.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: cat:CA2559_04310 cationic outer membrane protein precursor YP_004430089.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: cat:CA2559_04305 outer membrane protein YP_004430090.1 TIGRFAM: glutamate racemase; KEGG: zpr:ZPR_0615 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004430091.1 KEGG: cat:CA2559_01905 response regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_004430092.1 PFAM: histidine kinase internal region; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cat:CA2559_01910 autolysin sensor kinase YP_004430093.1 KEGG: cat:CA2559_01915 hypothetical protein YP_004430094.1 PFAM: OmpA/MotB domain protein; KEGG: cat:CA2559_11308 flagellar motor protein MotB YP_004430095.1 TIGRFAM: membrane protein; KEGG: cat:CA2559_00770 hypothetical protein YP_004430096.1 PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: cat:CA2559_01075 NifU-like domain protein YP_004430097.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: cat:CA2559_04655 acyl-CoA dehydrogenase-like protein YP_004430098.1 KEGG: gfo:GFO_0132 hypothetical protein; manually curated; PFAM: methyltransferase small YP_004430099.1 KEGG: gfo:GFO_3031 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain protein YP_004430100.1 KEGG: zpr:ZPR_4435 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_004430101.1 KEGG: cat:CA2559_04635 30S ribosomal protein S16 YP_004430102.1 PFAM: Protein of unknown function DUF2383; KEGG: cat:CA2559_04630 hypothetical protein YP_004430103.1 SMART: Exonuclease; phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: zpr:ZPR_4431 DNA polymerase III subunit alpha-1; PFAM: DNA polymerase III alpha subunit; PHP domain protein; Exonuclease RNase T and DNA polymerase III; nucleic acid binding OB-fold tRNA/helicase-type YP_004430104.1 KEGG: gfo:GFO_2618 hypothetical protein YP_004430106.1 PFAM: ATP-binding region ATPase domain protein; KEGG: gfo:GFO_2620 two-component system sensor histidine kinase YP_004430107.1 PFAM: response regulator receiver; KEGG: gfo:GFO_2621 response regulator receiver domain-containing protein YP_004430108.1 KEGG: cat:CA2559_02005 2-oxoglutarate dehydrogenase complex, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004430109.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: zpr:ZPR_4553 alpha-ketoglutarate decarboxylase; PFAM: Transketolase central region; dehydrogenase E1 component YP_004430110.1 KEGG: fps:FP2407 hypothetical protein YP_004430111.1 KEGG: ngr:NAEGRDRAFT_70512 hypothetical protein YP_004430112.1 PFAM: YCII-related; KEGG: bpt:Bpet3345 YciI-like protein YP_004430113.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: cat:CA2559_07125 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_004430114.1 KEGG: cat:CA2559_07130 hypothetical protein YP_004430115.1 KEGG: fps:FP1121 methylmalonyl-CoA mutase small subunit; PFAM: methylmalonyl-CoA mutase YP_004430116.1 KEGG: cat:CA2559_07145 uridine kinase; manually curated; PFAM: Septum formation initiator YP_004430117.1 TIGRFAM: uridine kinase; KEGG: fps:FP1119 uridine kinase YP_004430118.1 KEGG: fjo:Fjoh_0237 hypothetical protein YP_004430119.1 KEGG: coc:Coch_0477 GTP-binding proten HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004430120.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cat:CA2559_04510 hypothetical protein YP_004430121.1 KEGG: gfo:GFO_3161 hypothetical protein YP_004430122.1 KEGG: cat:CA2559_02635 hypothetical protein YP_004430123.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cat:CA2559_02630 hypothetical protein YP_004430124.1 KEGG: gfo:GFO_3164 hypothetical protein YP_004430125.1 PFAM: TonB-dependent receptor plug; KEGG: cpi:Cpin_5935 TonB-dependent receptor plug YP_004430126.1 KEGG: gfo:GFO_3166 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_004430127.1 PFAM: Peptidase M23; KEGG: cat:CA2559_02615 peptidase, M23/M37 family protein YP_004430128.1 PFAM: tryptophan 23-dioxygenase; KEGG: fps:FP0228 tryptophan 2,3-dioxygenase YP_004430129.1 KEGG: cat:CA2559_02605 hypothetical protein YP_004430130.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: fps:FP0226 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004430131.1 KEGG: cat:CA2559_08586 hypothetical protein YP_004430132.1 PFAM: homogentisate 12-dioxygenase; KEGG: gfo:GFO_3171 homogentisate 1,2-dioxygenase YP_004430133.1 PFAM: FAD dependent oxidoreductase; KEGG: rbi:RB2501_11857 D-amino acid dehydrogenase YP_004430134.1 KEGG: dfe:Dfer_4273 hydroxyproline-2-epimerase; PFAM: proline racemase YP_004430135.1 PFAM: protein of unknown function DUF885; KEGG: gfo:GFO_0062 secreted protein containing DUF885 YP_004430136.1 PFAM: Aldehyde Dehydrogenase; KEGG: zpr:ZPR_1384 aldehyde dehydrogenase YP_004430137.1 PFAM: dihydrodipicolinate synthetase; KEGG: zpr:ZPR_1385 dihydrodipicolinate synthetase YP_004430138.1 KEGG: zpr:ZPR_1386 activator protein MtlR; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_004430139.1 KEGG: gfo:GFO_1958 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004430140.1 KEGG: phe:Phep_2336 PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004430141.1 KEGG: lic:LIC12088 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_004430142.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: cat:CA2559_04870 hypothetical protein YP_004430143.1 KEGG: zpr:ZPR_4291 transmembrane MutS family DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein YP_004430144.1 KEGG: zpr:ZPR_4292 hypothetical protein YP_004430145.1 KEGG: rfr:Rfer_0177 hypothetical protein YP_004430146.1 KEGG: zpr:ZPR_4293 hypothetical protein YP_004430147.1 KEGG: zpr:ZPR_0776 hypothetical protein YP_004430148.1 KEGG: cat:CA2559_12588 hypothetical protein YP_004430149.1 PFAM: thiamine monophosphate synthase; KEGG: zpr:ZPR_0138 thiamine phosphate pyrophosphorylase YP_004430150.1 KEGG: gfo:GFO_3393 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004430152.1 KEGG: rbi:RB2501_13069 acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004430153.1 KEGG: zpr:ZPR_1035 hybrid sensory kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide TPR_1 repeat-containing protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide repeat; response regulator receiver YP_004430154.1 KEGG: cat:CA2559_01895 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004430155.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: gfo:GFO_0974 biotin carboxyl carrier protein of acyl-CoA carboxylase YP_004430156.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: cat:CA2559_11348 biotin carboxylase (AccC) YP_004430157.1 PFAM: carboxyl transferase; KEGG: zpr:ZPR_1999 acyl-CoA carboxylase carboxyl transferase beta subunit YP_004430158.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; RQC domain; HRDC domain protein; KEGG: cat:CA2559_01900 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein YP_004430159.1 KEGG: rbi:RB2501_09275 sodium-dependent transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter YP_004430160.1 KEGG: hor:Hore_08550 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: GTP cyclohydrolase II YP_004430161.1 PFAM: thiopurine S-methyltransferase; KEGG: fps:FP1441 hypothetical protein YP_004430162.1 KEGG: phe:Phep_2336 PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004430163.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cpi:Cpin_5926 TonB-dependent receptor YP_004430164.1 KEGG: hba:Hbal_0891 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004430165.1 KEGG: lic:LIC12088 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_004430166.1 SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: gfo:GFO_3568 hypothetical protein YP_004430167.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: rbi:RB2501_08040 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_004430168.1 KEGG: fjo:Fjoh_0809 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase YP_004430169.1 KEGG: fjo:Fjoh_2329 hypothetical protein YP_004430170.1 KEGG: cat:CA2559_05395 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_004430171.1 KEGG: cat:CA2559_05390 dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase YP_004430172.1 KEGG: fjo:Fjoh_0813 hypothetical protein YP_004430173.1 KEGG: fps:FP0119 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_004430174.1 KEGG: gfo:GFO_3550 M61 family glycyl aminopeptidase; PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein YP_004430175.1 KEGG: gfo:GFO_3552 membrane protein YP_004430176.1 KEGG: amt:Amet_2103 hypothetical protein YP_004430177.1 SMART: helix-turn-helix domain protein; KEGG: gfo:GFO_3551 HTH_3 family transcriptional regulator protein YP_004430178.1 PFAM: ATPase, F1 complex, delta/epsilon subunit-like; KEGG: rbi:RB2501_08005 ATP synthase F1, epsilon subunit YP_004430179.1 TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: cat:CA2559_01410 ATP synthase subunit B; SMART: AAA ATPase YP_004430180.1 KEGG: gfo:GFO_3547 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II YP_004430181.1 KEGG: cat:CA2559_01420 hypothetical protein YP_004430182.1 manually curated; KEGG: zpr:ZPR_4518 glycogen synthase-like protein; PFAM: Starch synthase catalytic domain-containing protein YP_004430183.1 KEGG: cat:CA2559_01430 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_004430184.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: zpr:ZPR_4520 aspartate 1-decarboxylase precursor; PFAM: aspartate decarboxylase YP_004430185.1 KEGG: cat:CA2559_01440 transmembrane protein YP_004430186.1 PFAM: esterase; KEGG: cat:CA2559_01445 esterase YP_004430187.1 KEGG: lbf:LBF_3233 serine phosphatase RsbU; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004430188.1 KEGG: cat:CA2559_01480 DNA repair protein; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_004430189.1 PFAM: Peptidase M23; KEGG: cat:CA2559_01485 peptidase YP_004430190.1 PFAM: aldo/keto reductase; KEGG: cat:CA2559_01770 aldo/keto reductase YP_004430191.1 PFAM: OmpA/MotB domain protein; KEGG: zpr:ZPR_4528 OmpA/MotB family outer membrane protein YP_004430192.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: gfo:GFO_3536 exodeoxyribonuclease; PFAM: Endonuclease/exonuclease/phosphatase YP_004430193.1 KEGG: cat:CA2559_01755 hypothetical protein YP_004430194.1 KEGG: slo:Shew_0493 hypothetical protein YP_004430195.1 KEGG: gfo:GFO_3535 hypothetical protein YP_004430196.1 KEGG: zpr:ZPR_0481 glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_004430197.1 KEGG: zpr:ZPR_0480 hypothetical protein YP_004430198.1 KEGG: gfo:GFO_3532 phosphoribosyltransferases family protein YP_004430199.1 TIGRFAM: phage head-tail adaptor; KEGG: cat:CA2559_01725 hypothetical protein YP_004430200.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: zpr:ZPR_0476 carbon-nitrogen hydrolase YP_004430201.1 KEGG: zpr:ZPR_1840 nucleotidyltransferase; PFAM: protein of unknown function DUF294 nucleotidyltransferase; CBS domain containing protein; cyclic nucleotide-binding; Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein; cyclic nucleotide-binding YP_004430202.1 TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: gfo:GFO_1905 exonuclease family protein; SMART: Exonuclease YP_004430203.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsl:RPSI07_1138 hypothethical protein YP_004430204.1 SMART: Ankyrin; KEGG: cat:CA2559_07000 ankyrin-like protein YP_004430205.1 KEGG: zpr:ZPR_0475 hypothetical protein YP_004430206.1 PFAM: aminotransferase class I and II; KEGG: cat:CA2559_04720 aminotransferase YP_004430207.1 KEGG: cat:CA2559_02070 hypothetical protein YP_004430208.1 PFAM: AMP-dependent synthetase and ligase; KEGG: hit:NTHI0002 long chain fatty acid CoA ligase YP_004430209.1 KEGG: rbi:RB2501_02230 peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004430210.1 KEGG: cat:CA2559_10808 catalase/peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_004430211.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: cat:CA2559_02065 transmembrane protein YP_004430212.1 KEGG: cat:CA2559_02060 hypothetical protein YP_004430213.1 KEGG: zpr:ZPR_0419 membrane protein YP_004430214.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; KEGG: cat:CA2559_04000 carboxy-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_004430215.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rbi:RB2501_05825 deoxycytidylate deaminase YP_004430216.1 KEGG: fjo:Fjoh_0531 hypothetical protein YP_004430217.1 KEGG: fjo:Fjoh_0532 hypothetical protein YP_004430218.1 KEGG: cat:CA2559_02280 sensory box sensor histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_004430219.1 TIGRFAM: small GTP-binding protein; PFAM: Ras family protein; KEGG: cat:CA2559_02285 hypothetical protein; SMART: Ras small GTPase, Rab type; Ras small GTPase, Ras type; Small GTPase, Rho type YP_004430220.1 KEGG: cat:CA2559_02290 hypothetical protein YP_004430221.1 KEGG: cat:CA2559_02295 fructose-1,6-bisphosphatase YP_004430222.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: cat:CA2559_02300 fructose-1,6-bisphosphatase YP_004430223.1 PFAM: GCN5-related N-acetyltransferase; KEGG: zpr:ZPR_0467 GNAT family acetyltransferase YP_004430224.1 KEGG: cat:CA2559_02310 lysine-sensitive aspartokinase III (aspartate kinase III); TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004430225.1 KEGG: fps:FP0063 hemolysin; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004430226.1 manually curated; KEGG: cat:CA2559_10403 hypothetical protein YP_004430227.1 KEGG: zpr:ZPR_1891 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_004430228.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; KEGG: rbi:RB2501_07205 histidine kinase sensor protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004430229.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: rbi:RB2501_00431 L-2,4-diaminobutyrate decarboxylase YP_004430230.1 KEGG: rbi:RB2501_05050 ArsR family regulatory protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004430231.1 KEGG: rbi:RB2501_05045 hypothetical protein YP_004430232.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rbi:RB2501_05040 glyoxalase YP_004430233.1 KEGG: rbi:RB2501_05030 hypothetical protein YP_004430234.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: cat:CA2559_03740 phosphoglycerate dehydrogenase YP_004430235.1 KEGG: bfs:BF1895 LPS biosynthesis related membrane protein YP_004430236.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cat:CA2559_03745 hypothetical protein YP_004430237.1 PFAM: thioesterase superfamily protein; KEGG: cat:CA2559_03750 hypothetical protein YP_004430238.1 KEGG: rbi:RB2501_05015 transmembrane Mg2+ transporter; TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein YP_004430239.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: cat:CA2559_03760 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_004430240.1 KEGG: gfo:GFO_3508 hypothetical protein YP_004430241.1 KEGG: cat:CA2559_03770 hypothetical protein YP_004430242.1 TIGRFAM: seryl-tRNA synthetase; KEGG: gfo:GFO_3506 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_004430243.1 KEGG: ptm:GSPATT00031335001 hypothetical protein YP_004430244.1 KEGG: cat:CA2559_06775 50S ribosomal protein L19 YP_004430245.1 KEGG: fba:FIC_00903 hypothetical protein YP_004430246.1 SMART: HTTM domain protein; KEGG: cat:CA2559_04035 gamma-glutamyl carboxylase-like protein YP_004430247.1 KEGG: zpr:ZPR_0451 riboflavin kinase / FAD synthetase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase YP_004430248.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: zpr:ZPR_0450 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_004430249.1 KEGG: zpr:ZPR_0449 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like YP_004430250.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: gfo:GFO_3498 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004430251.1 KEGG: rbi:RB2501_06355 hypothetical protein YP_004430252.1 KEGG: dfe:Dfer_4404 hypothetical protein YP_004430253.1 KEGG: phe:Phep_3041 hypothetical protein YP_004430254.1 KEGG: swd:Swoo_0477 outer membrane adhesin like protein YP_004430255.1 KEGG: cat:CA2559_02275 hypothetical protein YP_004430256.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: gfo:GFO_3524 ATP-dependent DNA ligase YP_004430257.1 KEGG: zpr:ZPR_4437 leucyl-tRNA synthetase YP_004430258.1 KEGG: cat:CA2559_02265 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004430259.1 KEGG: gfo:GFO_3101 histone deacetylase family protein; PFAM: histone deacetylase superfamily YP_004430260.1 KEGG: fba:FIC_00898 RNA binding protein with S1 RNA-binding domain; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_004430261.1 KEGG: cat:CA2559_04125 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein YP_004430262.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: cat:CA2559_04130 carboxypeptidase YP_004430263.1 PFAM: Uncharacterised protein family UPF0102; KEGG: fps:FP0059 hypothetical protein YP_004430264.1 KEGG: cat:CA2559_06790 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004430265.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: zpr:ZPR_2926 CmpR YP_004430266.1 KEGG: nve:NEMVE_v1g150384 hypothetical protein YP_004430267.1 KEGG: hse:Hsero_0886 bacteriophage-related tail transmembrane protein YP_004430268.1 PFAM: protein of unknown function DUF897; KEGG: ava:Ava_2163 hypothetical protein YP_004430269.1 KEGG: fjo:Fjoh_3359 hypothetical protein YP_004430270.1 PFAM: protein of unknown function DUF161; Protein of unknown function DUF2179; KEGG: chu:CHU_0826 permease YP_004430271.1 KEGG: zpr:ZPR_1317 hypothetical protein YP_004430272.1 KEGG: zpr:ZPR_1318 carboxypeptidase-like, regulatory region YP_004430273.1 PFAM: Protein of unknown function DUF2490; KEGG: cat:CA2559_04575 hypothetical protein YP_004430274.1 KEGG: cat:CA2559_04570 leucyl/phenylalanyl-tRNA--protein transferase YP_004430275.1 TIGRFAM: transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein; KEGG: cat:CA2559_02560 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_004430276.1 PFAM: DoxX family protein; KEGG: zpr:ZPR_4600 membrane protein YP_004430277.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: zpr:ZPR_4602 glutathione reductase YP_004430278.1 KEGG: zpr:ZPR_4604 membrane protein YP_004430279.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: cat:CA2559_04970 decarboxylase, pyridoxal-dependent YP_004430280.1 PFAM: metallophosphoesterase; KEGG: cat:CA2559_02260 hypothetical protein YP_004430281.1 PFAM: Lycopene beta and epsilon cyclase; KEGG: fjo:Fjoh_0926 lycopene beta and epsilon cyclase YP_004430282.1 KEGG: abo:ABO_1537 haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_004430283.1 KEGG: cat:CA2559_03720 DnaJ domain containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004430284.1 PFAM: protein of unknown function DUF1094; KEGG: zpr:ZPR_0127 hypothetical protein YP_004430285.1 KEGG: zpr:ZPR_0125 HD domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004430286.1 KEGG: gfo:GFO_3212 secreted prolyl oligopeptidase family protein YP_004430287.1 PFAM: TonB-dependent receptor plug; KEGG: rbi:RB2501_15674 hypothetical protein YP_004430288.1 PFAM: oxidoreductase domain protein; KEGG: rbi:RB2501_05855 dehydrogenase YP_004430289.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cat:CA2559_03685 enoyl-CoA hydratase/carnithine racemase YP_004430290.1 KEGG: zpr:ZPR_0119 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004430291.1 PFAM: Uncharacterised protein family UPF0093; KEGG: zpr:ZPR_0118 membrane protein, UPF0093 YP_004430292.1 KEGG: cat:CA2559_03670 hypothetical protein YP_004430293.1 KEGG: mcl:MCCL_0467 hypothetical protein YP_004430294.1 KEGG: rbi:RB2501_06050 Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004430295.1 KEGG: gfo:GFO_1501 hypothetical protein YP_004430296.1 TIGRFAM: ferrochelatase; KEGG: gfo:GFO_3220 ferrochelatase (protoheme ferro-lyase); PFAM: ferrochelatase YP_004430297.1 KEGG: cat:CA2559_03650 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004430298.1 TIGRFAM: glutamyl-tRNA reductase; KEGG: cat:CA2559_03645 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase YP_004430299.1 KEGG: cat:CA2559_03640 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_004430300.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: gfo:GFO_3225 uroporphyrinogen-III synthase YP_004430301.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: cat:CA2559_03630 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_004430302.1 KEGG: gfo:GFO_3227 hypothetical protein YP_004430303.1 KEGG: hne:HNE_1323 TrkH family potassium uptake protein; PFAM: cation transporter YP_004430304.1 KEGG: cat:CA2559_03620 hypothetical protein YP_004430305.1 KEGG: zpr:ZPR_0107 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase YP_004430306.1 KEGG: gym:GYMC10_1505 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase YP_004430307.1 KEGG: cat:CA2559_03605 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_004430308.1 KEGG: fjo:Fjoh_4619 hypothetical protein YP_004430309.1 KEGG: zpr:ZPR_0825 phosphatase/phosphohexomutase-like protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004430310.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: rbi:RB2501_05980 hypothetical protein YP_004430311.1 KEGG: gfo:GFO_2345 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide TPR_1 repeat-containing protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide repeat YP_004430312.1 KEGG: cat:CA2559_03590 methylated-DNA--protein-cysteine S-methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_004430313.1 PFAM: beta-lactamase; KEGG: cat:CA2559_03585 hypothetical protein YP_004430314.1 PFAM: 3'-5' exonuclease, PolB-like; KEGG: cat:CA2559_03580 polysaccharide biosynthesis protein YP_004430315.1 KEGG: cat:CA2559_00730 hypothetical protein YP_004430316.1 KEGG: mxa:MXAN_3676 hypothetical protein; PFAM: peptidase M36 fungalysin; MAM protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; MAM protein YP_004430317.1 KEGG: cat:CA2559_03560 ABC-type dipeptide transport system, ATPase component; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004430318.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: cat:CA2559_03100 3-oxoadipate CoA-succinyl transferase, beta subunit; PFAM: coenzyme A transferase YP_004430319.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: cat:CA2559_03105 3-oxoacid CoA-transferase subunit A; PFAM: coenzyme A transferase YP_004430320.1 KEGG: gfo:GFO_3241 bifunctional transglycosylase/transpeptidase penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004430321.1 TIGRFAM: gliding motility-associated lipoprotein GldH; KEGG: zpr:ZPR_0091 gliding motility lipoprotein GldH-like protein YP_004430322.1 PFAM: PSP1 domain protein; KEGG: zpr:ZPR_0090 PSP1 domain-containing protein YP_004430323.1 KEGG: cat:CA2559_03470 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004430324.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: cat:CA2559_03480 RecA; SMART: AAA ATPase YP_004430325.1 KEGG: zpr:ZPR_0082 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004430326.1 KEGG: cat:CA2559_03495 hypothetical protein YP_004430327.1 KEGG: fps:FP2246 acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004430328.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: cat:CA2559_03505 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004430329.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cat:CA2559_02840 6-pyruvoyl tetrahydrobiopterin synthase YP_004430330.1 PFAM: metallophosphoesterase; KEGG: cat:CA2559_02835 UDP-2,3-diacylglucosamine hydrolase YP_004430331.1 KEGG: cat:CA2559_02825 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_004430332.1 KEGG: coc:Coch_0658 adhesin precursor SprB YP_004430333.1 PFAM: OsmC family protein; KEGG: rbi:RB2501_07430 hypothetical protein YP_004430334.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: cat:CA2559_02815 probable fusion protein YP_004430335.1 KEGG: cat:CA2559_11983 hypothetical protein YP_004430336.1 KEGG: cat:CA2559_02490 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_004430337.1 KEGG: zpr:ZPR_0176 hypothetical protein YP_004430338.1 KEGG: tet:TTHERM_00540160 Leucine Rich Repeat family protein YP_004430339.1 manually curated; KEGG: cat:CA2559_02480 hypothetical protein YP_004430340.1 KEGG: zpr:ZPR_0178 lipoprotein signal peptidase YP_004430341.1 KEGG: gfo:GFO_3179 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004430342.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; KEGG: gfo:GFO_3178 two-component system sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein YP_004430343.1 KEGG: fps:FP0220 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004430344.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: gfo:GFO_3176 succinylglutamate desuccinylase / aspartoacylase family protein YP_004430345.1 KEGG: gfo:GFO_3175 ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp YP_004430346.1 PFAM: protein of unknown function DUF785; KEGG: gfo:GFO_3174 protein containing DUF785 YP_004430347.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; KEGG: zpr:ZPR_0184 UvrABC system protein C; SMART: Excinuclease ABC C subunit domain protein YP_004430348.1 PFAM: Patatin; KEGG: cat:CA2559_01780 patatin-like phospholipase YP_004430349.1 KEGG: lil:LA_1004 hypothetical protein YP_004430350.1 TIGRFAM: pyruvate kinase; KEGG: cat:CA2559_03130 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_004430351.1 KEGG: zpr:ZPR_0281 hypothetical protein YP_004430352.1 KEGG: chu:CHU_1899 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004430353.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: gfo:GFO_3384 ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_004430354.1 KEGG: rbi:RB2501_07540 3-oxoacyl-[acyl-carrier-protein] synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_004430355.1 KEGG: fps:FP0200 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_004430356.1 PFAM: formyl transferase domain protein; KEGG: gfo:GFO_3381 phosphoribosylglycinamide formyltransferase YP_004430357.1 KEGG: cat:CA2559_03160 ribonuclease H-related protein YP_004430358.1 PFAM: PfkB domain protein; KEGG: fps:FP0197 carbohydrate kinase YP_004430359.1 KEGG: zpr:ZPR_0274 amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II YP_004430360.1 KEGG: cat:CA2559_03175 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like YP_004430361.1 PFAM: UvrD/REP helicase; KEGG: zpr:ZPR_0272 UvrD/REP family helicase YP_004430362.1 TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: zpr:ZPR_0271 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II YP_004430363.1 PFAM: OmpA/MotB domain protein; Thrombospondin type 3 repeat-containing protein; KEGG: cat:CA2559_03195 thrombospondin type 3 repeat:OmpA/MotB YP_004430364.1 KEGG: cat:CA2559_03200 hypothetical protein YP_004430365.1 PFAM: integrase family protein; KEGG: chu:CHU_1462 Tn5520-like integrase (transfer factor) YP_004430366.1 KEGG: rbi:RB2501_04935 hypothetical protein YP_004430367.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: rbi:RB2501_04940 mobilization protein YP_004430368.1 KEGG: rbi:RB2501_04945 hypothetical protein YP_004430369.1 KEGG: zpr:ZPR_3424 DNA primase YP_004430370.1 PFAM: virulence-associated E family protein; KEGG: fps:FP0491 hypothetical protein YP_004430371.1 KEGG: rbi:RB2501_04950 excisionase; manually curated; TIGRFAM: DNA binding domain protein, excisionase family YP_004430372.1 KEGG: lba:Lebu_0128 DegV family protein YP_004430373.1 KEGG: cat:CA2559_11668 cation-transporting ATPase, P-type, zinc-transporting ATPase; TIGRFAM: cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004430374.1 manually curated; KEGG: fjo:Fjoh_3090 hypothetical protein YP_004430375.1 PFAM: Heavy metal transport/detoxification protein; Mercuric transport protein MerT; KEGG: cat:CA2559_11673 probable copper-transporting ATPase YP_004430376.1 KEGG: cat:CA2559_11678 transcription regulator YP_004430377.1 PFAM: cation efflux protein; KEGG: cat:CA2559_11683 integral membrane protein YP_004430378.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cat:CA2559_11688 cation efflux system protein YP_004430379.1 KEGG: cat:CA2559_11693 cation efflux system protein, AcrB/AcrD/AcrF family protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; outer membrane efflux protein YP_004430380.1 KEGG: sli:Slin_3539 hypothetical protein YP_004430381.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cat:CA2559_11703 cation efflux system transmembrane protein YP_004430382.1 PFAM: protein of unknown function DUF305; KEGG: cat:CA2559_11708 hypothetical protein YP_004430383.1 KEGG: cat:CA2559_11713 hypothetical protein YP_004430384.1 KEGG: cat:CA2559_11718 hypothetical protein YP_004430385.1 KEGG: cat:CA2559_11723 heavy-metal transporting P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004430386.1 PFAM: Ion transport 2 domain protein; KEGG: gfo:GFO_1249 membrane protein YP_004430387.1 KEGG: cat:CA2559_11733 hypothetical protein YP_004430388.1 KEGG: cat:CA2559_11738 hypothetical protein YP_004430389.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: zpr:ZPR_3384 multicopper oxidase YP_004430390.1 KEGG: cat:CA2559_11748 regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004430391.1 PFAM: outer membrane efflux protein; KEGG: cat:CA2559_11753 metal ion efflux outer membrane protein family protein YP_004430392.1 PFAM: acriflavin resistance protein; KEGG: cat:CA2559_11758 copper/silver resistance-related transport membrane protein YP_004430393.1 KEGG: cat:CA2559_11763 hypothetical protein YP_004430394.1 PFAM: UspA domain-containing protein; KEGG: cat:CA2559_02880 hypothetical protein YP_004430395.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gfo:GFO_3370 GNAT family acetyltransferase YP_004430396.1 manually curated; TIGRFAM: MATE efflux family protein; KEGG: cat:CA2559_02855 hypothetical protein; PFAM: multi antimicrobial extrusion protein MatE YP_004430397.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: cat:CA2559_03225 Na(+):H(+) antiporter, CPA1 family protein YP_004430398.1 KEGG: fjo:Fjoh_1187 beta-lactamase domain-containing protein YP_004430399.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: zpr:ZPR_0006 secreted subtilase family protein YP_004430400.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: rbi:RB2501_06970 Zn-dependent aminopeptidase YP_004430401.1 KEGG: cat:CA2559_10658 RumB/ImpB like DNA repair protein; PFAM: UMUC domain protein DNA-repair protein YP_004430402.1 KEGG: cat:CA2559_10663 SOS-response transcriptional repressors (RecA-mediatedautopeptidase)-like protein YP_004430403.1 KEGG: gfo:GFO_3318 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_004430404.1 KEGG: cat:CA2559_03115 hypothetical protein YP_004430405.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: cat:CA2559_03110 carboxy-terminal processing protease precursor; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_004430406.1 KEGG: fps:FP0021 OmpA family outer membrane protein; manually curated; PFAM: OmpA/MotB domain protein YP_004430407.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cat:CA2559_13328 acetyltransferase, GNAT family protein YP_004430408.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cat:CA2559_03440 probable acetyltransferase YybD YP_004430409.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: cat:CA2559_03435 ribose 5-phosphate isomerase B, PFAM: Ribose/galactose isomerase YP_004430410.1 KEGG: lch:Lcho_3233 biopolymer transport protein ExbD/TolR YP_004430411.1 SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: gfo:GFO_3312 ribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein YP_004430412.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N-acetyltransferase; KEGG: tdn:Suden_0615 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004430413.1 KEGG: rbi:RB2501_03040 hypothetical protein YP_004430414.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rbi:RB2501_06885 hypothetical protein YP_004430415.1 KEGG: cat:CA2559_03415 FolB; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_004430416.1 PFAM: Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon domain; KEGG: mac:MA3295 hypothetical protein YP_004430417.1 KEGG: cat:CA2559_03410 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_004430418.1 KEGG: cat:CA2559_03405 hypothetical protein YP_004430419.1 KEGG: gfo:GFO_3305 membrane protein YP_004430420.1 KEGG: zpr:ZPR_0026 glutaminyl-tRNA synthetase YP_004430421.1 KEGG: cat:CA2559_03380 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein YP_004430422.1 KEGG: cat:CA2559_03375 hypothetical protein YP_004430423.1 TIGRFAM: glutamyl-tRNA synthetase; KEGG: zpr:ZPR_0027 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004430424.1 KEGG: cat:CA2559_03365 glutamyl-tRNA synthetase YP_004430425.1 PFAM: protein of unknown function UPF0054; KEGG: fjo:Fjoh_1004 hypothetical protein YP_004430426.1 KEGG: fjo:Fjoh_1003 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_004430427.1 PFAM: Methyltransferase type 11; KEGG: fps:FP0004 SAM-dependent methyltransferase YP_004430428.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: gfo:GFO_3297 outer membrane protein (OmpH-like) YP_004430430.1 KEGG: zpr:ZPR_0035 DNA polymerase III subunit delta' YP_004430431.1 KEGG: fjo:Fjoh_0977 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004430432.1 KEGG: zpr:ZPR_0037 membrane-bound lytic murein transglycosylase; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004430433.1 KEGG: chu:CHU_0403 hypothetical protein YP_004430434.1 KEGG: cat:CA2559_03305 hypothetical protein YP_004430435.1 KEGG: rbi:RB2501_06760 hypothetical protein; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004430436.1 PFAM: Peptidase M23; KEGG: cat:CA2559_02890 peptidase YP_004430437.1 PFAM: GH3 auxin-responsive promoter; KEGG: zpr:ZPR_0041 hypothetical protein YP_004430438.1 KEGG: gfo:GFO_3288 hypothetical protein YP_004430439.1 KEGG: fjo:Fjoh_1029 hypothetical protein YP_004430440.1 KEGG: cat:CA2559_02910 GDP-D-mannose dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004430441.1 KEGG: fph:Fphi_1249 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; PFAM: NAD-dependent epimerase/dehydratase YP_004430442.1 TIGRFAM: methyltransferase FkbM family; KEGG: gur:Gura_1687 FkbM family methyltransferase YP_004430443.1 PFAM: polysaccharide biosynthesis protein; KEGG: cat:CA2559_02920 O-antigen transporter YP_004430444.1 PFAM: glycosyl transferase group 1; KEGG: cat:CA2559_02925 glycosyltransferase YP_004430445.1 PFAM: O-antigen polymerase; KEGG: cat:CA2559_02935 hypothetical protein YP_004430446.1 KEGG: cat:CA2559_02930 hypothetical protein YP_004430447.1 PFAM: glycosyl transferase group 1; KEGG: npu:Npun_R5713 glycosyl transferase, group 1 YP_004430448.1 KEGG: sul:SYO3AOP1_1396 glycosyl transferase group 1 YP_004430449.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fjo:Fjoh_1037 NAD-dependent epimerase/dehydratase YP_004430450.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: cat:CA2559_02960 glycosyltransferase; PFAM: sugar transferase YP_004430451.1 PFAM: glycosyl transferase family 2; KEGG: zpr:ZPR_0044 TuaG-like glycosyl transferase YP_004430452.1 KEGG: gfo:GFO_3283 capsular polysaccharide biosynthesis protein YP_004430453.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: gfo:GFO_3282 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_004430454.1 KEGG: fjo:Fjoh_1042 hypothetical protein YP_004430455.1 KEGG: gfo:GFO_3280 membrane protein YP_004430456.1 KEGG: cat:CA2559_02995 hypothetical protein YP_004430457.1 PFAM: glycosyl transferase family 9; KEGG: zpr:ZPR_0050 RfaQ-like lipopolysaccharide core biosynthesis glycosyl transferase YP_004430458.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: cpi:Cpin_1695 2-nitropropane dioxygenase NPD YP_004430459.1 KEGG: cat:CA2559_03390 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004430460.1 KEGG: cat:CA2559_03385 hypothetical protein YP_004430461.1 KEGG: slg:SLGD_01971 secretion system component EssB/YukC YP_004430462.1 KEGG: ckr:CKR_2719 hypothetical protein YP_004430463.1 KEGG: pfh:PFHG_04397 hypothetical protein YP_004430464.1 KEGG: hac:Hac_1233 flagellar hook protein FlgE YP_004430465.1 KEGG: pfh:PFHG_01490 conserved hypothetical protein YP_004430466.1 KEGG: tet:TTHERM_01592570 hypothetical protein YP_004430467.1 KEGG: cur:cur_0295 hypothetical protein YP_004430468.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cat:CA2559_03005 phenylacetate-CoA oxygenase/reductase, PaaK subunit YP_004430469.1 KEGG: rbi:RB2501_06595 hypothetical protein YP_004430470.1 KEGG: cat:CA2559_03015 ATP-binding component of ABC transporter protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004430471.1 KEGG: cat:CA2559_03020 TPR domain protein YP_004430472.1 PFAM: protein of unknown function DUF583; KEGG: cat:CA2559_03025 hypothetical protein YP_004430473.1 KEGG: fjo:Fjoh_1053 hypothetical protein YP_004430474.1 KEGG: fba:FIC_00824 hypothetical protein YP_004430475.1 KEGG: fjo:Fjoh_1055 ATP synthase F0, A subunit; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_004430476.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: fjo:Fjoh_1056 H+-transporting two-sector ATPase, C subunit YP_004430477.1 KEGG: rbi:RB2501_06555 F0F1 ATP synthase subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_004430478.1 KEGG: cat:CA2559_03055 ATP synthase subunit D; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_004430479.1 KEGG: cat:CA2559_03060 ATP synthase subunit A; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_004430480.1 KEGG: cat:CA2559_03065 H+-transporting two-sector ATPase, gamma subunit; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_004430481.1 KEGG: gfo:GFO_3264 membrane or secreted protein YP_004430482.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: gfo:GFO_3263 polysaccharide biosynthesis protein YP_004430483.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: fjo:Fjoh_1063 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase YP_004430484.1 PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: fjo:Fjoh_1064 nucleotidyl transferase YP_004430485.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: gfo:GFO_3259 TPR repeat-containing protein YP_004430486.1 KEGG: zpr:ZPR_0072 hypothetical protein YP_004430487.1 PFAM: Peptidase M23; KEGG: gfo:GFO_3257 M23 family peptidase YP_004430488.1 PFAM: CsbD family protein; KEGG: cat:CA2559_08871 CsbD-like protein YP_004430489.1 PFAM: thioesterase superfamily protein; KEGG: gfo:GFO_3254 acyl-CoA thioester hydrolase YP_004430490.1 PFAM: Sporulation domain-containing protein; KEGG: cat:CA2559_03520 hypothetical protein YP_004430491.1 KEGG: gfo:GFO_3252 smf family protein; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_004430492.1 KEGG: rbi:RB2501_07730 hypothetical protein YP_004430493.1 KEGG: cat:CA2559_02210 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; transport-associated; SMART: Peptidoglycan-binding LysM YP_004430494.1 KEGG: asu:Asuc_1888 hypothetical protein YP_004430495.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: cat:CA2559_02205 nicotinic acid mononucleotide adenyltransferase; PFAM: cytidylyltransferase YP_004430496.1 PFAM: HopJ type III effector protein; KEGG: cja:CJA_1687 type III effector HopPmaJ(Pto) YP_004430497.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: fjo:Fjoh_0742 guanylate kinase; PFAM: guanylate kinase YP_004430498.1 PFAM: domain of unknown function DUF1732; YicC-like domain-containing protein; KEGG: cat:CA2559_02195 hypothetical protein YP_004430499.1 KEGG: tvo:TVN0805 amino acid transporter YP_004430500.1 PFAM: protein of unknown function DUF1080; KEGG: rbi:RB2501_05690 multi-domain protein YP_004430501.1 PFAM: protein of unknown function DUF1080; KEGG: rbi:RB2501_05695 probable secreted glycosyl hydrolase YP_004430502.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; KEGG: zpr:ZPR_2438 apurinic/apyrimidinic endonuclease YP_004430503.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: zpr:ZPR_2439 oxidoreductase family protein YP_004430504.1 KEGG: zpr:ZPR_2440 nucleoside:proton symporter YP_004430505.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: zpr:ZPR_2441 xylose isomerase-like protein YP_004430506.1 KEGG: zpr:ZPR_2442 glucoside 3-dehydrogenase; manually curated; PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase YP_004430507.1 KEGG: gfo:GFO_1028 hypothetical protein YP_004430508.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: zpr:ZPR_4222 probable glyoxylate-induced protein YP_004430509.1 PFAM: protein of unknown function DUF214; KEGG: cat:CA2559_04535 cell division protein YP_004430510.1 KEGG: cat:CA2559_04540 hypothetical protein YP_004430511.1 PFAM: Bacitracin resistance protein BacA; KEGG: gfo:GFO_3037 undecaprenyl-diphosphatase YP_004430512.1 KEGG: pfd:PFDG_00489 hypothetical protein YP_004430513.1 KEGG: cat:CA2559_04550 tRNA pseudouridine synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_004430514.1 KEGG: gfo:GFO_3039 hypothetical protein YP_004430515.1 KEGG: cat:CA2559_04560 hypothetical protein YP_004430516.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: zpr:ZPR_4445 DNA-3-methyladenine glycosylase; PFAM: methyladenine glycosylase YP_004430517.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: cat:CA2559_04580 leucyl/phenylalanyl-tRNA-protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_004430518.1 KEGG: ngr:NAEGRDRAFT_80587 hypothetical protein YP_004430519.1 KEGG: cat:CA2559_01675 hypothetical protein YP_004430520.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: zpr:ZPR_4449 flavin reductase like protein YP_004430522.1 KEGG: rbi:RB2501_07665 hypothetical protein YP_004430523.1 KEGG: rbi:RB2501_07670 hypothetical protein YP_004430524.1 KEGG: chu:CHU_3785 methionine--tRNA ligase (methionine tRNA synthetase); TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain-containing protein YP_004430525.1 TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: fjo:Fjoh_2586 OsmC family protein; PFAM: OsmC family protein YP_004430526.1 KEGG: fjo:Fjoh_2789 hypothetical protein YP_004430527.1 PFAM: OmpA/MotB domain protein; KEGG: fjo:Fjoh_2790 OmpA/MotB domain-containing protein YP_004430528.1 PFAM: Aldehyde Dehydrogenase; KEGG: cat:CA2559_02440 probable piperideine-6-carboxylate dehydrogenase YP_004430529.1 TIGRFAM: 3-hydroxyanthranilate 3,4-dioxygenase; KEGG: zpr:ZPR_0297 3-hydroxyanthranilate 3,4-dioxygenase; PFAM: 3-hydroxyanthranilic acid dioxygenase YP_004430530.1 PFAM: SCP-like extracellular; KEGG: gfo:GFO_1840 SCP-like extracellular protein YP_004430531.1 PFAM: peptidase T2 asparaginase 2; KEGG: cat:CA2559_03725 asparaginase YP_004430532.1 KEGG: gfo:GFO_3114 hypothetical protein YP_004430533.1 KEGG: fjo:Fjoh_5041 GCN5-related N-acetyltransferase YP_004430534.1 KEGG: cat:CA2559_01920 inosine monophosphate dehydrogenase-related protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004430535.1 PFAM: peptidase M28; KEGG: gfo:GFO_3117 M28 family peptidase YP_004430536.1 KEGG: zpr:ZPR_4598 hypothetical protein YP_004430537.1 KEGG: cat:CA2559_03930 peptidase, M13 family (lipoprotein); PFAM: peptidase M13; Peptidase M13, neprilysin-like YP_004430538.1 KEGG: fps:FP0087 glycosyl hydrolase YP_004430539.1 KEGG: gfo:GFO_3096 hypothetical protein YP_004430540.1 KEGG: zpr:ZPR_4566 hypothetical protein YP_004430541.1 KEGG: cat:CA2559_04730 oxidoreductase protein; PFAM: NAD-dependent epimerase/dehydratase YP_004430542.1 KEGG: hba:Hbal_3170 hypothetical protein; manually curated; PFAM: Uncharacterised conserved protein UCP037205 YP_004430543.1 PFAM: Class I peptide chain release factor; KEGG: cat:CA2559_01530 peptidyl-tRNA hydrolase YP_004430544.1 KEGG: dfe:Dfer_2909 azurin; TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein YP_004430545.1 PFAM: alpha/beta hydrolase fold; KEGG: rbi:RB2501_07745 hydrolase, alpha/beta fold family protein YP_004430546.1 PFAM: regulatory protein TetR; KEGG: cpi:Cpin_4897 transcriptional regulator, TetR family YP_004430547.1 KEGG: cat:CA2559_02175 hypothetical protein YP_004430548.1 KEGG: cat:CA2559_02545 hypothetical protein YP_004430549.1 KEGG: fjo:Fjoh_1863 hypothetical protein YP_004430550.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cat:CA2559_02540 hypothetical protein YP_004430551.1 KEGG: gfo:GFO_3441 ArsC family protein; manually curated; PFAM: arsenate reductase and related YP_004430552.1 KEGG: fps:FP0353 hypothetical protein YP_004430553.1 KEGG: zpr:ZPR_0340 hypothetical protein YP_004430554.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gfo:GFO_3443 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme YP_004430555.1 KEGG: cat:CA2559_02520 hypothetical protein YP_004430556.1 KEGG: gfo:GFO_3186 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region YP_004430557.1 KEGG: cat:CA2559_02505 immunoreactive 84 kDa antigen YP_004430558.1 KEGG: cat:CA2559_02500 possible DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_004430559.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cat:CA2559_02495 hypothetical protein YP_004430560.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gfo:GFO_3356 tetrapyrrole (corrin/porphyrin) methylase family protein YP_004430561.1 KEGG: cat:CA2559_02425 hypothetical protein YP_004430562.1 KEGG: gfo:GFO_3355 hypothetical protein YP_004430563.1 KEGG: gfo:GFO_3354 thymidine kinase; PFAM: thymidine kinase YP_004430564.1 TIGRFAM: alanine racemase; KEGG: cat:CA2559_02410 alanine racemase; PFAM: alanine racemase domain protein YP_004430565.1 KEGG: rbi:RB2501_07395 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_004430566.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: zpr:ZPR_4613 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_004430567.1 PFAM: chloramphenicol acetyltransferase; KEGG: fjo:Fjoh_0863 chloramphenicol acetyltransferase YP_004430568.1 PFAM: DoxX family protein; KEGG: cat:CA2559_02395 hypothetical protein YP_004430569.1 KEGG: cat:CA2559_02385 prolyl endopeptidase; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_004430570.1 KEGG: gfo:GFO_3429 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein YP_004430571.1 KEGG: cat:CA2559_02235 phenylalanyl-tRNA synthetase alpha subunit YP_004430572.1 KEGG: gfo:GFO_3424 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_004430573.1 KEGG: zpr:ZPR_0326 hypothetical protein YP_004430574.1 PFAM: Colicin V production protein; KEGG: zpr:ZPR_0324 colicin V production protein YP_004430575.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rbi:RB2501_07580 probable sulfate permease YP_004430576.1 PFAM: carbonic anhydrase; KEGG: rbi:RB2501_07585 prokaryotic-type carbonic anhydrase YP_004430577.1 PFAM: sulphate transporter; KEGG: rbi:RB2501_07590 sulfate transporter YP_004430578.1 KEGG: dre:100006932 ret finger protein-like YP_004430579.1 SMART: Tetratricopeptide repeat; KEGG: zpr:ZPR_0322 aerotolerance-related protein BatE YP_004430580.1 KEGG: cat:CA2559_02130 hypothetical protein YP_004430581.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cat:CA2559_02135 aerotolerance-related exported protein YP_004430582.1 KEGG: cat:CA2559_02145 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_004430583.1 KEGG: zpr:ZPR_0318 von Willebrand factor(vWA) type A domain-containing protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_004430584.1 KEGG: cat:CA2559_02155 conserved membrane exported protein YP_004430585.1 PFAM: protein of unknown function DUF58; KEGG: cat:CA2559_02160 hypothetical protein YP_004430586.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: fjo:Fjoh_0715 ATPase YP_004430587.1 PFAM: aldo/keto reductase; KEGG: cat:CA2559_02170 oxidoreductase, aldo/keto reductase family protein YP_004430588.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gfo:GFO_3408 NADP-dependent L-serine/L-allo-threonine dehydrogenase YP_004430589.1 PFAM: AAA-4 family protein; KEGG: gfo:GFO_3407 hypothetical protein YP_004430590.1 PFAM: metallophosphoesterase; KEGG: gfo:GFO_3406 metallophosphoesterase domain-containing protein YP_004430591.1 KEGG: cat:CA2559_01685 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein YP_004430592.1 PFAM: NUDIX hydrolase; KEGG: dfe:Dfer_3936 NUDIX hydrolase YP_004430593.1 KEGG: cat:CA2559_01690 hypothetical protein YP_004430594.1 PFAM: histidine triad (HIT) protein; KEGG: cat:CA2559_01700 HIT family protein YP_004430595.1 KEGG: cat:CA2559_05325 hypothetical protein YP_004430596.1 KEGG: gfo:GFO_3048 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004430597.1 KEGG: gfo:GFO_3049 secreted protein YP_004430598.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gfo:GFO_3050 TonB-dependent outer membrane receptor YP_004430599.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: zpr:ZPR_4438 ketopantoate reductase PanE/ApbA; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004430600.1 KEGG: cat:CA2559_04530 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_004430601.1 KEGG: pme:NATL1_16431 hypothetical protein; PFAM: MtN3/saliva-related transmembrane protein, conserved region; SMART: Cystinosin/ERS1p repeat YP_004430602.1 TIGRFAM: alanine dehydrogenase; KEGG: rbi:RB2501_08320 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_004430603.1 PFAM: peptidase membrane zinc metallopeptidase; KEGG: rbi:RB2501_08325 hypothetical protein YP_004430604.1 KEGG: gfo:GFO_3026 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004430605.1 KEGG: cat:CA2559_09663 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_004430606.1 PFAM: protein of unknown function DUF58; KEGG: cat:CA2559_04945 hypothetical protein YP_004430607.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sli:Slin_3250 peptidase M20 YP_004430608.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: rbi:RB2501_08905 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_004430609.1 KEGG: cat:CA2559_12603 hypothetical protein YP_004430610.1 KEGG: cat:CA2559_07510 hypothetical protein YP_004430611.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: fps:FP2041 deoxyribodipyrimidine photolyase PhrB2 YP_004430612.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: zpr:ZPR_3763 deoxyribodipyrimidine photolyase family protein YP_004430613.1 KEGG: gfo:GFO_2715 cryptochrome-like DNA photolyase family protein; TIGRFAM: cryptochrome, DASH family; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_004430614.1 KEGG: cat:CA2559_01535 hypothetical protein YP_004430615.1 KEGG: gfo:GFO_3058 NadR-like transcriptional regulator YP_004430616.1 KEGG: gfo:GFO_3059 nicotinamide mononucleotide transporter PnuC; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC YP_004430617.1 KEGG: gfo:GFO_3060 hypothetical protein YP_004430618.1 KEGG: sli:Slin_4987 hypothetical protein YP_004430619.1 KEGG: gfo:GFO_3065 geranylgeranylglyceryl phosphate synthase-like protein; TIGRFAM: geranylgeranylglyceryl phosphate synthase; geranylgeranylglyceryl phosphate synthase family protein; PFAM: PcrB family protein YP_004430620.1 KEGG: cat:CA2559_03790 siderophore (surfactin) biosynthesis regulatory protein YP_004430621.1 TIGRFAM: adenosylhomocysteinase; KEGG: zpr:ZPR_4471 S-adenosylhomocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_004430622.1 KEGG: zpr:ZPR_2085 secreted protein YP_004430623.1 KEGG: mpe:MYPE4920 hypothetical protein YP_004430624.1 KEGG: rbi:RB2501_08330 AsnC-family transcriptional regulatory protein; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004430625.1 KEGG: gfo:GFO_0103 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase YP_004430626.1 PFAM: protein of unknown function DUF423; KEGG: cat:CA2559_01660 hypothetical protein YP_004430627.1 KEGG: cat:CA2559_01655 phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP) YP_004430628.1 KEGG: apr:Apre_0965 hypothetical protein YP_004430629.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cat:CA2559_02645 predicted permease YP_004430630.1 KEGG: fps:FP1663 gliding motility protein GldD; manually curated; TIGRFAM: gliding motility-associated lipoprotein GldD YP_004430631.1 KEGG: cat:CA2559_02660 transmembrane CorC/HlyC family transporter associatedprotein; TIGRFAM: gliding motility-associated protein GldE; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region YP_004430632.1 KEGG: cat:CA2559_02665 single-strand DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004430633.1 KEGG: rbi:RB2501_01950 hypothetical protein YP_004430634.1 KEGG: rbi:RB2501_01955 activator protein MtlR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004430635.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: gfo:GFO_3576 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein YP_004430636.1 KEGG: fjo:Fjoh_1534 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004430637.1 KEGG: gfo:GFO_3573 ribonuclease G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004430638.1 PFAM: regulatory protein RecX; KEGG: coc:Coch_1030 regulatory protein RecX YP_004430639.1 KEGG: cat:CA2559_10578 hypothetical protein YP_004430640.1 PFAM: Protein of unknown function, Porph ging; KEGG: zpr:ZPR_1317 hypothetical protein YP_004430641.1 KEGG: zpr:ZPR_4320 thioesterase superfamily protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein YP_004430642.1 KEGG: gfo:GFO_3205 iron dependent repressor; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor YP_004430643.1 KEGG: cat:CA2559_02030 hypothetical protein YP_004430644.1 PFAM: periplasmic solute binding protein; KEGG: cat:CA2559_02035 zinc ABC transporter, periplasmic zinc-binding protein YP_004430645.1 KEGG: cat:CA2559_02040 zinc ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004430646.1 KEGG: gfo:GFO_3324 hypothetical protein YP_004430647.1 PFAM: ABC-3 protein; KEGG: cat:CA2559_02045 zinc ABC transporter, permease protein YP_004430648.1 PFAM: ABC-3 protein; KEGG: cat:CA2559_02050 zinc ABC transporter, permease protein YP_004430649.1 KEGG: deg:DehalGT_1176 hypothetical protein YP_004430650.1 KEGG: cat:CA2559_03990 ferrous iron transport protein B-like protein; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein YP_004430651.1 PFAM: FeoA family protein; KEGG: zpr:ZPR_0246 ferrous iron transport protein A YP_004430652.1 PFAM: electron transport protein SCO1/SenC; KEGG: zpr:ZPR_0248 electron transport protein YP_004430653.1 PFAM: peptidase M50; KEGG: fba:FIC_00095 membrane-associated zinc metalloprotease YP_004430654.1 TIGRFAM: conserved repeat domain protein; PFAM: Cna B domain protein; Thrombospondin type 3 repeat-containing protein; Na-Ca exchanger/integrin-beta4; KEGG: fps:FP0319 hypothetical protein; SMART: Na-Ca exchanger/integrin-beta4 YP_004430655.1 TIGRFAM: membrane protein; KEGG: cat:CA2559_13648 hypothetical protein YP_004430656.1 PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; KEGG: cat:CA2559_13643 OmpA family protein YP_004430657.1 PFAM: Penicillinase repressor; KEGG: gfo:GFO_0078 BlaI-like antibiotic resistance-related regulatory protein YP_004430658.1 PFAM: peptidase M56 BlaR1; KEGG: gfo:GFO_0077 hypothetical protein YP_004430659.1 KEGG: gfo:GFO_0075 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004430660.1 KEGG: gfo:GFO_0074 hypothetical protein YP_004430661.1 PFAM: glycosyl transferase family 2; KEGG: zpr:ZPR_4299 transmembrane family-2 glycosyl transferase YP_004430662.1 KEGG: fjo:Fjoh_1378 hypothetical protein YP_004430663.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: cat:CA2559_04920 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_004430664.1 SMART: Elongator protein 3/MiaB/NifB; manually curated; KEGG: cat:CA2559_04915 coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein YP_004430665.1 KEGG: cat:CA2559_04895 metal-dependent hydrolase YP_004430666.1 KEGG: gwc:GWCH70_0592 antibiotic biosynthesis monooxygenase YP_004430667.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: fps:FP2233 lipoprotein precursor YP_004430668.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; manually curated; KEGG: fps:FP2234 membrane carboxypeptidase/penicillin-binding protein PbpC; TIGRFAM: penicillin-binding protein 1C YP_004430669.1 PFAM: YCII-related; KEGG: rbi:RB2501_07570 phenylalanyl-tRNA synthetase alpha subunit YP_004430670.1 PFAM: adenylate cyclase; KEGG: coc:Coch_1434 adenylate cyclase YP_004430671.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sfr:Sfri_2448 glyoxalase/bleomycin resistance protein/dioxygenase YP_004430672.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sse:Ssed_0993 glyoxalase/dioxygenase superfamily protein YP_004430673.1 PFAM: Semialdehyde dehydrogenase NAD - binding; KEGG: zpr:ZPR_0284 NAD dependent epimerase/dehydratase protein YP_004430674.1 KEGG: cat:CA2559_02810 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein YP_004430675.1 KEGG: cpi:Cpin_0801 hypothetical protein YP_004430676.1 KEGG: cat:CA2559_05140 hypothetical protein YP_004430677.1 PFAM: MscS Mechanosensitive ion channel; KEGG: rbi:RB2501_10842 membrane transport protein YP_004430678.1 PFAM: peptidase M56 BlaR1; KEGG: gfo:GFO_1769 BlaR1 peptidase M56 family protein YP_004430679.1 PFAM: Penicillinase repressor; KEGG: zpr:ZPR_2370 antibiotic resistance-related regulatory protein YP_004430680.1 KEGG: gfo:GFO_2917 secreted protein YP_004430681.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cat:CA2559_04975 peptidase YP_004430682.1 KEGG: fjo:Fjoh_3297 hypothetical protein YP_004430683.1 PFAM: PfkB domain protein; KEGG: pha:PSHAb0209 carbohydrate kinase YP_004430684.1 TIGRFAM: sugar transporter; KEGG: gfo:GFO_0008 major facilitator superfamily permease sugar transporter YP_004430685.1 KEGG: dfe:Dfer_1603 levanase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32 YP_004430686.1 KEGG: cat:CA2559_05070 LacI-family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004430687.1 KEGG: fjo:Fjoh_1402 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004430688.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: rbi:RB2501_08600 maltose phosphorylase YP_004430689.1 KEGG: cat:CA2559_05135 hypothetical protein YP_004430690.1 PFAM: pentapeptide repeat protein; KEGG: zpr:ZPR_1638 hypothetical protein YP_004430691.1 PFAM: transcription activator effector binding; KEGG: rbi:RB2501_08555 hypothetical protein YP_004430692.1 KEGG: rbi:RB2501_08560 phosphoesterase, PA-phosphatase related protein YP_004430693.1 PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: rbi:RB2501_08565 hypothetical protein YP_004430694.1 PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: rbi:RB2501_08570 hypothetical protein YP_004430695.1 PFAM: ASPIC/UnbV domain protein; KEGG: rbi:RB2501_08575 hypothetical protein YP_004430696.1 PFAM: RagB/SusD domain protein; KEGG: rbi:RB2501_08580 hypothetical protein YP_004430697.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: rbi:RB2501_08585 outer membrane protein YP_004430698.1 KEGG: gfo:GFO_2132 alpha amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004430699.1 PFAM: HI0933 family protein; KEGG: cat:CA2559_04960 hypothetical protein YP_004430700.1 PFAM: TspO/MBR family protein; KEGG: cat:CA2559_04610 integral membrane protein YP_004430701.1 PFAM: GHMP kinase; KEGG: fjo:Fjoh_1389 GHMP kinase YP_004430702.1 PFAM: GHMP kinase; KEGG: cat:CA2559_04600 mevalonate kinase YP_004430703.1 PFAM: UbiA prenyltransferase; KEGG: gfo:GFO_3628 prenyltransferase family protein YP_004430704.1 KEGG: zpr:ZPR_4564 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004430705.1 KEGG: cat:CA2559_01935 hypothetical protein YP_004430706.1 KEGG: fjo:Fjoh_1248 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_004430707.1 KEGG: cat:CA2559_04660 hypothetical protein YP_004430708.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: cat:CA2559_01650 possible uroporphyrinogen-III synthase YP_004430709.1 KEGG: gfo:GFO_0107 membrane protein YP_004430710.1 PFAM: glycosyl transferase family 2; KEGG: gfo:GFO_0108 dolichol-phosphate mannosyltransferase family protein YP_004430711.1 PFAM: amidohydrolase; KEGG: cat:CA2559_01635 dihydroorotase YP_004430712.1 KEGG: zpr:ZPR_0492 hypothetical protein YP_004430713.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: coc:Coch_0180 NAD-dependent epimerase/dehydratase YP_004430714.1 TIGRFAM: tyrosyl-tRNA synthetase; KEGG: gfo:GFO_0112 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004430715.1 KEGG: cat:CA2559_01845 hypothetical protein YP_004430716.1 KEGG: fjo:Fjoh_0548 hypothetical protein YP_004430717.1 KEGG: zpr:ZPR_0499 two-component system response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004430718.1 KEGG: gfo:GFO_0119 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004430719.1 KEGG: fjo:Fjoh_0541 hypothetical protein YP_004430720.1 PFAM: methyltransferase; KEGG: zpr:ZPR_0502 methyltransferase YP_004430721.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cat:CA2559_01790 tRNA (guanine-N(7)-)-methyltransferase YP_004430722.1 KEGG: fjo:Fjoh_1334 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_004430723.1 PFAM: ATPase-like, ParA/MinD; KEGG: zpr:ZPR_0505 Mrp/Nbp35 family ATP-binding protein YP_004430724.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: rbi:RB2501_08435 hypothetical protein YP_004430725.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cat:CA2559_00750 thioredoxin reductase YP_004430726.1 PFAM: ferredoxin; KEGG: rbi:RB2501_08445 ferredoxin YP_004430727.1 KEGG: rbi:RB2501_08525 hypothetical protein YP_004430728.1 KEGG: msl:Msil_1949 hypothetical protein YP_004430729.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bvi:Bcep1808_0170 UBA/ThiF-type NAD/FAD binding protein YP_004430730.1 KEGG: bvi:Bcep1808_0171 hypothetical protein YP_004430731.1 KEGG: spf:SpyM51320 phage repressor protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004430732.1 PFAM: protein of unknown function DUF955; KEGG: fra:Francci3_0882 hypothetical protein YP_004430733.1 KEGG: rbi:RB2501_00776 hypothetical protein YP_004430734.1 KEGG: rbi:RB2501_05950 hypothetical protein YP_004430735.1 KEGG: cat:CA2559_04490 hypothetical protein YP_004430736.1 PFAM: Protein of unknown function DUF2480; KEGG: zpr:ZPR_0207 hypothetical protein YP_004430737.1 PFAM: protein of unknown function DUF59; KEGG: cat:CA2559_04480 hypothetical protein YP_004430738.1 PFAM: Fe-S metabolism associated SufE; KEGG: cat:CA2559_04475 hypothetical protein YP_004430739.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: cat:CA2559_04470 hypothetical protein YP_004430740.1 KEGG: cat:CA2559_09418 protease synthase and sporulation negative regulatory protein pai 1; manually curated; PFAM: GCN5-related N-acetyltransferase YP_004430741.1 KEGG: zpr:ZPR_0211 cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_004430742.1 KEGG: gfo:GFO_3131 FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_004430743.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: fps:FP2392 Fe-S assembly ATPase, SufC; SMART: AAA ATPase YP_004430744.1 KEGG: cat:CA2559_04450 hypothetical protein YP_004430745.1 KEGG: cat:CA2559_04445 AttM/AiiB family protein YP_004430746.1 KEGG: fps:FP2393 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_004430747.1 KEGG: rbi:RB2501_05910 scaffold protein for iron-sulfur cluster assembly; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004430748.1 PFAM: ATP-cone domain protein; ribonucleotide reductase; KEGG: hmu:Hmuk_3350 ribonucleotide reductase YP_004430749.1 TIGRFAM: ribonucleoside-diphosphate reductase, alpha chain; KEGG: hap:HAPS_1342 ribonucleotide-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein YP_004430750.1 KEGG: gym:GYMC10_2848 hypothetical protein YP_004430751.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: caa:Caka_1487 TonB-dependent receptor YP_004430752.1 KEGG: taf:THA_20 hypothetical protein; manually curated; PFAM: protein of unknown function DUF81 YP_004430753.1 KEGG: rbi:RB2501_01221 hypothetical protein YP_004430754.1 KEGG: rbi:RB2501_14879 hypothetical protein YP_004430755.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: coc:Coch_0398 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004430756.1 KEGG: rbi:RB2501_05890 hypothetical protein YP_004430757.1 PFAM: alpha/beta hydrolase fold; KEGG: fps:FP0154 hydrolase YP_004430758.1 KEGG: rbi:RB2501_05885 sodium-coupled branched-chain amino acid carrier protein; TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein YP_004430759.1 KEGG: rbi:RB2501_05130 hypothetical protein YP_004430760.1 TIGRFAM: aspartate kinase; KEGG: bvu:BVU_3856 aspartokinase; PFAM: aspartate/glutamate/uridylate kinase YP_004430761.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: cat:CA2559_04710 probable X-pro aminopeptidase YP_004430762.1 PFAM: carbonic anhydrase; KEGG: chu:CHU_0526 carbonic anhydrase YP_004430763.1 KEGG: cat:CA2559_04705 hypothetical protein YP_004430764.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: rbi:RB2501_06365 succinate dehydrogenase, cytochrome b558 subunit YP_004430765.1 TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: rbi:RB2501_06370 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004430766.1 PFAM: ferredoxin; KEGG: cat:CA2559_04690 succinate dehydrogenase, iron-sulfur protein YP_004430767.1 KEGG: zpr:ZPR_2575 hypothetical protein YP_004430768.1 KEGG: rbi:RB2501_05655 phosphate sodium symporter YP_004430769.1 KEGG: gfo:GFO_3089 hypothetical protein YP_004430770.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: rmr:Rmar_2560 TonB-dependent receptor YP_004430771.1 KEGG: rmr:Rmar_2561 hypothetical protein YP_004430772.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; KEGG: zpr:ZPR_0414 dGTP triphosphohydrolase-like protein; PFAM: metal-dependent phosphohydrolase HD sub domain YP_004430773.1 PFAM: peptidase M36 fungalysin; protease-associated PA domain protein; KEGG: cat:CA2559_04140 metalloprotease YP_004430774.1 KEGG: fjo:Fjoh_1523 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein YP_004430775.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cat:CA2559_04155 cytosine/adenosine deaminase YP_004430776.1 KEGG: cat:CA2559_12073 hypothetical protein YP_004430777.1 PFAM: Radical SAM domain protein; KEGG: cat:CA2559_12078 hypothetical protein YP_004430778.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cat:CA2559_04585 hydrolase, carbon-nitrogen family protein YP_004430779.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cat:CA2559_02760 hypothetical protein YP_004430780.1 KEGG: rbi:RB2501_08660 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_004430781.1 PFAM: glycosyl transferase family 2; KEGG: zpr:ZPR_1072 glycosyl transferase YP_004430782.1 PFAM: lipid A biosynthesis domain protein; KEGG: gfo:GFO_1218 lipid-A-disaccharide synthase domain-containing protein YP_004430783.1 PFAM: glycosyl transferase family 39; KEGG: cat:CA2559_13408 glycosyltransferase YP_004430784.1 KEGG: cat:CA2559_05415 hypothetical protein YP_004430785.1 PFAM: glycosyl transferase family 2; KEGG: rbi:RB2501_08720 glycosyltransferase YP_004430786.1 PFAM: glycosyl transferase family 2; KEGG: zpr:ZPR_4199 RfbJ-like lipopolysaccharide biosynthesis glycosyl transferase YP_004430787.1 KEGG: chu:CHU_1774 hypothetical protein YP_004430788.1 PFAM: FAD dependent oxidoreductase; KEGG: fps:FP2348 oxidoreductase YP_004430789.1 KEGG: cat:CA2559_02375 hypothetical protein YP_004430790.1 KEGG: fps:FP1504 ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004430791.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: cat:CA2559_12883 mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type I YP_004430792.1 PFAM: metallophosphoesterase; KEGG: gfo:GFO_0142 metallophosphoesterase domain-containing protein YP_004430793.1 PFAM: Thioredoxin domain-containing protein; KEGG: cat:CA2559_01370 thioredoxin C-2 YP_004430794.1 PFAM: polysaccharide deacetylase; KEGG: fps:FP0293 polysaccharide deacetylase YP_004430795.1 PFAM: Integral membrane protein TerC; KEGG: cat:CA2559_10498 membrane protein, TerC family protein YP_004430796.1 KEGG: cat:CA2559_01380 hypothetical protein YP_004430797.1 KEGG: cat:CA2559_13248 hypothetical protein YP_004430798.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gfo:GFO_0277 uncharacterized stress protein (general stress protein 26) YP_004430799.1 PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: gfo:GFO_2048 small-conductance mechanosensitive ion channel protein YP_004430800.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: gfo:GFO_1552 transport protein YP_004430801.1 PFAM: UspA domain-containing protein; KEGG: cat:CA2559_01350 universal stress protein YP_004430802.1 PFAM: protein of unknown function DUF150; KEGG: zpr:ZPR_0573 hypothetical protein YP_004430803.1 KEGG: zpr:ZPR_0574 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein YP_004430804.1 KEGG: cat:CA2559_01335 translation initiation factor; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein YP_004430805.1 PFAM: Sporulation domain-containing protein; KEGG: cat:CA2559_01325 hypothetical protein YP_004430806.1 PFAM: cytochrome c class I; KEGG: cat:CA2559_01315 cytochrome c3 YP_004430807.1 KEGG: cat:CA2559_01310 molybdopterin oxidoreductase, iron-sulfur binding subunit YP_004430808.1 PFAM: Polysulphide reductase NrfD; KEGG: cat:CA2559_01305 molybdopterin oxidoredutase membrane subunit YP_004430809.1 KEGG: cat:CA2559_01300 hypothetical protein YP_004430810.1 KEGG: gfo:GFO_0164 hypothetical protein YP_004430811.1 KEGG: cat:CA2559_01290 hypothetical protein YP_004430812.1 PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; KEGG: cat:CA2559_01285 cytochrome c oxidase, subunit II:cytochrome c, class I YP_004430813.1 PFAM: cytochrome c oxidase subunit I; KEGG: cat:CA2559_01280 cytochrome-c oxidase YP_004430814.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: gfo:GFO_0168 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_004430815.1 PFAM: cytochrome P450; KEGG: gfo:GFO_0170 cytochrome P450 YP_004430816.1 PFAM: domain of unknown function DUF1730; KEGG: gfo:GFO_0176 4Fe-4S binding domain-containing protein YP_004430817.1 PFAM: major facilitator superfamily MFS_1; KEGG: rbi:RB2501_03635 sugar transporter YP_004430818.1 PFAM: major facilitator superfamily MFS_1; KEGG: fjo:Fjoh_1261 major facilitator transporter YP_004430819.1 KEGG: fjo:Fjoh_1262 alpha,alpha-trehalase; PFAM: glycoside hydrolase family 37; Neutral trehalase Ca2 binding YP_004430820.1 PFAM: PfkB domain protein; KEGG: cat:CA2559_01230 fructokinase YP_004430821.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: cat:CA2559_01220 NADP-dependent malate dehydrogenase YP_004430822.1 KEGG: zpr:ZPR_0589 Holliday junction ATP-dependent DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein YP_004430823.1 KEGG: cat:CA2559_01210 hypothetical protein YP_004430824.1 KEGG: cat:CA2559_01205 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_004430825.1 PFAM: VanZ family protein; KEGG: gfo:GFO_0184 membrane protein YP_004430826.1 KEGG: cat:CA2559_01195 TonB YP_004430827.1 KEGG: cat:CA2559_01195 TonB YP_004430828.1 KEGG: cat:CA2559_01185 hypothetical protein YP_004430829.1 KEGG: rno:299858 low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) YP_004430830.1 KEGG: fjo:Fjoh_4706 glyoxalase/bleomycin resistance protein/dioxygenase YP_004430831.1 KEGG: gfo:GFO_2388 metallo-beta-lactamase domain-containing protein YP_004430832.1 KEGG: cat:CA2559_01175 cytochrome c oxidase assembly factor (CtaA) + protoheme IX farnesyltransferase (CtaB); TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_004430833.1 PFAM: cytochrome c oxidase subunit III; KEGG: zpr:ZPR_0596 cytochrome c oxidase subunit III YP_004430834.1 PFAM: cytochrome c oxidase subunit III; KEGG: cat:CA2559_01165 probable cytochrome-C oxidase subunit III oxidoreductase protein YP_004430835.1 KEGG: rbi:RB2501_03580 hypothetical protein YP_004430836.1 KEGG: zpr:ZPR_0599 membrane or secreted protein YP_004430837.1 PFAM: electron transport protein SCO1/SenC; KEGG: gfo:GFO_0193 electron transport protein YP_004430838.1 PFAM: protein of unknown function DUF420; KEGG: fjo:Fjoh_1664 hypothetical protein YP_004430839.1 KEGG: gfo:GFO_0195 hypothetical protein YP_004430840.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: rbi:RB2501_15614 TonB-dependent receptor domain protein YP_004430841.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cat:CA2559_04680 TonB-dependent receptor YP_004430842.1 KEGG: cat:CA2559_04675 hypothetical protein YP_004430843.1 KEGG: cat:CA2559_01135 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004430844.1 PFAM: protein of unknown function DUF214; KEGG: cat:CA2559_01130 ABC transporter YP_004430845.1 PFAM: protein of unknown function DUF214; KEGG: cat:CA2559_01125 ABC transporter, permease protein YP_004430846.1 KEGG: zpr:ZPR_0606 HlyD family secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004430847.1 PFAM: outer membrane efflux protein; KEGG: zpr:ZPR_0607 HlyD family secretion protein YP_004430848.1 KEGG: zpr:ZPR_0608 HlyD family secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004430849.1 PFAM: peptidase M22 glycoprotease; KEGG: gfo:GFO_0202 M22 family peptidase YP_004430850.1 PFAM: MscS Mechanosensitive ion channel; KEGG: cps:CPS_1419 mechanosensitive ion channel family protein YP_004430851.1 PFAM: MscS Mechanosensitive ion channel; KEGG: cat:CA2559_01095 mechanosensitive ion channel family protein YP_004430852.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: gfo:GFO_0204 hypothetical protein YP_004430853.1 PFAM: protein of unknown function DUF1458; KEGG: rbi:RB2501_03490 hypothetical protein YP_004430854.1 PFAM: protein of unknown function DUF477; KEGG: rbi:RB2501_09185 hypothetical protein YP_004430855.1 PFAM: protein of unknown function DUF477; KEGG: cat:CA2559_04775 hypothetical protein YP_004430856.1 PFAM: LemA family protein; KEGG: bth:BT_4212 hypothetical protein YP_004430857.1 KEGG: aae:aq_666 HupE hydrogenase related function YP_004430858.1 KEGG: gfo:GFO_0228 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_004430859.1 PFAM: Peptidase M23; KEGG: cat:CA2559_04760 peptidase YP_004430860.1 KEGG: cat:CA2559_04755 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_004430861.1 PFAM: GSCFA domain protein; KEGG: cat:CA2559_05130 hypothetical protein YP_004430862.1 SMART: Rhodanese domain protein; KEGG: sli:Slin_2684 rhodanese domain protein YP_004430863.1 PFAM: Aromatic amino acid hydroxylase-like; KEGG: cat:CA2559_05350 phenylalanine 4-monooxygenase (phenylalanine-4-hydroxylase) YP_004430864.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cat:CA2559_05265 enoyl-CoA hydratase/isomerase YP_004430865.1 KEGG: cat:CA2559_00590 lipoprotein YP_004430866.1 manually curated; KEGG: gfo:GFO_0236 hypothetical protein YP_004430867.1 KEGG: gfo:GFO_0237 hypothetical protein YP_004430868.1 KEGG: fjo:Fjoh_1912 1-aminocyclopropane-1-carboxylate deaminase-like protein YP_004430869.1 KEGG: cat:CA2559_00645 hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme subfamily 2; Peptidoglycan-binding LysM YP_004430870.1 KEGG: gfo:GFO_0240 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_004430871.1 KEGG: tpd:Teth39_1777 DNA adenine methylase YP_004430872.1 KEGG: cat:CA2559_05490 hypothetical protein YP_004430873.1 KEGG: cat:CA2559_05500 hypothetical protein YP_004430874.1 KEGG: cpi:Cpin_3479 hypothetical protein YP_004430875.1 PFAM: YiaAB two helix domain-containing protein; KEGG: cpi:Cpin_3478 YiaAB two helix domain protein YP_004430876.1 PFAM: DSBA oxidoreductase; KEGG: gfo:GFO_0822 DsbA thioredoxin oxdioreductase family protein-polyketide synthase YP_004430877.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: pat:Patl_2708 ethyl tert-butyl ether degradation EthD YP_004430878.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gfo:GFO_0820 short chain dehydrogenase YP_004430879.1 KEGG: cat:CA2559_12088 hypothetical protein YP_004430880.1 PFAM: regulatory protein TetR; KEGG: cat:CA2559_12083 transcriptional regulator, TetR family protein YP_004430881.1 KEGG: tgu:100218107 similar to transglutaminase 3 YP_004430882.1 TIGRFAM: adenosine deaminase; KEGG: tau:Tola_2207 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_004430883.1 PFAM: FAD dependent oxidoreductase; KEGG: cat:CA2559_02550 potassium transporter (trk family) YP_004430884.1 PFAM: MORN variant repeat-containing protein; KEGG: chu:CHU_1410 hypothetical protein YP_004430885.1 KEGG: rty:RT0586 transcription-repair coupling factor YP_004430886.1 PFAM: protein of unknown function DUF1260; KEGG: fnu:FN0296 cytoplasmic protein YP_004430887.1 KEGG: dma:DMR_25990 hypothetical protein YP_004430888.1 KEGG: cat:CA2559_05510 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004430889.1 KEGG: cat:CA2559_05515 hypothetical protein YP_004430890.1 KEGG: rbi:RB2501_09285 hypothetical protein YP_004430891.1 TIGRFAM: lipoate-protein ligase B; KEGG: gfo:GFO_2925 lipoyltransferase; PFAM: biotin/lipoate A/B protein ligase YP_004430892.1 KEGG: cat:CA2559_05535 ribonuclease HII YP_004430893.1 KEGG: cat:CA2559_05540 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_004430894.1 KEGG: gfo:GFO_2916 hypothetical protein YP_004430895.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: rbi:RB2501_04555 DNA polymerase III alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein YP_004430896.1 KEGG: rbi:RB2501_04560 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein YP_004430897.1 PFAM: peptidase M16 domain protein; KEGG: zpr:ZPR_2932 M16 family peptidase YP_004430898.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cat:CA2559_07550 drug/metabolite transporter (dmt superfamily) YP_004430899.1 KEGG: gfo:GFO_0356 secreted protein YP_004430900.1 PFAM: cell cycle protein; KEGG: cat:CA2559_00585 transmembrane rod shape-determining protein YP_004430901.1 KEGG: gfo:GFO_2961 penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004430902.1 TIGRFAM: rod shape-determining protein MreD; KEGG: fps:FP2419 hypothetical protein YP_004430903.1 KEGG: zpr:ZPR_0660 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_004430904.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: gfo:GFO_2958 rod shape-determining protein MreB; SMART: actin/actin family protein YP_004430905.1 PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; KEGG: zpr:ZPR_0662 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; SMART: AICARFT/IMPCHase bienzyme formylation region YP_004430906.1 PFAM: protein of unknown function DUF214; KEGG: zpr:ZPR_0663 ABC transporter efflux protein YP_004430907.1 PFAM: GAF domain protein; KEGG: fjo:Fjoh_1447 GAF domain-containing protein YP_004430908.1 PFAM: Exosortase EpsH-related; KEGG: cat:CA2559_00545 hypothetical protein YP_004430909.1 KEGG: cat:CA2559_00540 hypothetical protein YP_004430910.1 KEGG: cat:CA2559_00535 hypothetical protein YP_004430911.1 manually curated; KEGG: cat:CA2559_06655 hypothetical protein YP_004430912.1 KEGG: zpr:ZPR_2565 hypothetical protein YP_004430913.1 KEGG: zpr:ZPR_3387 hypothetical protein YP_004430914.1 KEGG: zpr:ZPR_4041 hypothetical protein YP_004430915.1 KEGG: bfs:BF3365 metal transport-related, exported protein YP_004430916.1 PFAM: NHL repeat containing protein; KEGG: rbi:RB2501_04865 NHL repeat protein YP_004430917.1 PFAM: Heavy metal transport/detoxification protein; KEGG: rbi:RB2501_04660 hypothetical protein YP_004430918.1 KEGG: hit:NTHI0639 potassium-tellurite ethidium and proflavin transporter YP_004430919.1 KEGG: rbi:RB2501_08955 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_004430920.1 PFAM: Chaperonin Cpn10; KEGG: zpr:ZPR_4158 co-chaperonin GroES YP_004430921.1 KEGG: gfo:GFO_3594 membrane protein containing preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004430922.1 KEGG: gfo:GFO_3593 hypothetical protein YP_004430923.1 KEGG: gfo:GFO_3592 hypothetical protein YP_004430924.1 KEGG: fba:FIC_01290 tRNA modification GTPase YP_004430925.1 KEGG: zpr:ZPR_4154 sigma-54 dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004430926.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: zpr:ZPR_4153 tRNA-i(6)A37 modification enzyme MiaB; SMART: Elongator protein 3/MiaB/NifB YP_004430927.1 PFAM: Protein of unknown function DUF2219; KEGG: fjo:Fjoh_0633 hypothetical protein YP_004430928.1 KEGG: cat:CA2559_00710 hypothetical protein YP_004430929.1 KEGG: tet:TTHERM_00040379 two-component sensor protein histidine protein kinase (dhkk, dhkj) YP_004430930.1 KEGG: cin:100183117 similar to stanniocalcin 2-B YP_004430931.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: cat:CA2559_00715 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein YP_004430932.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: gfo:GFO_3016 hypothetical protein YP_004430933.1 KEGG: cat:CA2559_00725 lipoprotein, TIGRFAM: gliding motility-associated lipoprotein GldK; PFAM: protein of unknown function DUF323 YP_004430934.1 TIGRFAM: gliding motility-associated protein GldL; KEGG: cat:CA2559_00730 hypothetical protein YP_004430935.1 TIGRFAM: gliding motility-associated protein GldM; KEGG: zpr:ZPR_4148 hypothetical protein YP_004430936.1 TIGRFAM: gliding motility associated protein GldN; KEGG: cat:CA2559_00740 hypothetical protein YP_004430937.1 PFAM: FAD dependent oxidoreductase; KEGG: zpr:ZPR_4146 oxidoreductase YP_004430938.1 KEGG: cat:CA2559_01710 hypothetical protein YP_004430939.1 KEGG: cat:CA2559_01715 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004430940.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: zpr:ZPR_4143 HlyD family secretion protein YP_004430941.1 PFAM: acriflavin resistance protein; KEGG: gfo:GFO_3008 AcrB/AcrD/AcrF family membrane transporter YP_004430942.1 PFAM: outer membrane efflux protein; KEGG: cat:CA2559_01590 outer membrane protein TolC YP_004430943.1 KEGG: zpr:ZPR_4140 hypothetical protein YP_004430944.1 KEGG: gfo:GFO_3005 hypothetical protein YP_004430945.1 KEGG: gfo:GFO_0154 hypothetical protein YP_004430946.1 PFAM: integrase family protein; KEGG: rbi:RB2501_14074 hypothetical protein YP_004430947.1 KEGG: ddf:DEFDS_0950 hypothetical protein YP_004430948.1 KEGG: vha:VIBHAR_05926 hypothetical protein YP_004430949.1 KEGG: bfr:BF0515 hypothetical protein YP_004430950.1 KEGG: ngr:NAEGRDRAFT_78429 sec7 domain family member YP_004430951.1 KEGG: cat:CA2559_03965 hypothetical protein YP_004430952.1 KEGG: vvi:100242383 hypothetical protein LOC100242383 YP_004430953.1 KEGG: amc:MADE_03618 hypothetical protein YP_004430954.1 KEGG: ddi:DDB_G0289245 hypothetical protein YP_004430955.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; KEGG: dol:Dole_2724 type III restriction protein res subunit; SMART: DEAD-like helicase YP_004430956.1 PFAM: N-6 DNA methylase; KEGG: cch:Cag_1525 type I restriction modification enzyme methylase subunit YP_004430957.1 PFAM: restriction modification system DNA specificity domain; KEGG: gur:Gura_2097 restriction modification system DNA specificity subunit YP_004430958.1 KEGG: psl:Psta_4440 ABC transporter YP_004430959.1 KEGG: dze:Dd1591_4237 hypothetical protein YP_004430960.1 KEGG: gfo:GFO_3175 ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp YP_004430961.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: gfo:GFO_3176 succinylglutamate desuccinylase / aspartoacylase family protein YP_004430962.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: gfo:GFO_0979 YeeE/YedE domain-containing protein YP_004430963.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: zpr:ZPR_2395 YeeE/YedE family protein YP_004430964.1 KEGG: coc:Coch_1464 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004430965.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: coc:Coch_1463 cytochrome bd ubiquinol oxidase subunit I YP_004430966.1 KEGG: sli:Slin_4535 hypothetical protein YP_004430967.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fba:FIC_02103 TonB dependent receptor YP_004430968.1 PFAM: Ferritin Dps family protein; KEGG: chu:CHU_2021 DNA-binding protein; DPS family protein YP_004430969.1 KEGG: zpr:ZPR_1810 rhodanese-like protein YP_004430970.1 KEGG: zpr:ZPR_1796 antioxidant, AhpC/TSA family protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_004430971.1 KEGG: zpr:ZPR_2076 cysteine synthase; TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004430972.1 KEGG: gfo:GFO_1531 serine O-acetyltransferase YP_004430973.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rbi:RB2501_07270 hypothetical protein YP_004430974.1 KEGG: saf:SULAZ_0541 carbonic anhydrase (carbonate dehydratase); PFAM: carbonic anhydrase YP_004430975.1 PFAM: Protein of unknown function DUF2490; KEGG: gfo:GFO_1280 hypothetical protein YP_004430976.1 KEGG: cts:Ctha_2510 conserved hypothetical protein; signal peptide YP_004430977.1 PFAM: protein of unknown function DUF202; KEGG: rbi:RB2501_09065 hypothetical protein YP_004430978.1 KEGG: tcx:Tcr_0383 heavy metal transport/detoxification protein YP_004430979.1 KEGG: cat:CA2559_11818 conserved hypothetical rhodanese-domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004430980.1 KEGG: fps:FP0517 rhodanese-related sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004430981.1 KEGG: zpr:ZPR_1794 metallo-beta-lactamase superfamily protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004430982.1 PFAM: Rhodanese domain protein; KEGG: rbi:RB2501_07245 metallo-beta-lactamase superfamily protein YP_004430983.1 PFAM: protein of unknown function DUF81; KEGG: gfo:GFO_1266 membrane protein YP_004430984.1 KEGG: rbi:RB2501_07235 transcriptional regulator, Crp family protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp YP_004430985.1 KEGG: rbi:RB2501_07230 hypothetical protein YP_004430986.1 manually curated; KEGG: rbi:RB2501_05405 hypothetical protein YP_004430987.1 KEGG: rbi:RB2501_05410 transport-related, membrane protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; outer membrane efflux protein YP_004430988.1 KEGG: rbi:RB2501_05415 cation efflux system protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004430989.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: zpr:ZPR_3256 integral membrane protein YP_004430990.1 KEGG: cat:CA2559_01580 hypothetical protein YP_004430991.1 KEGG: cat:CA2559_13433 hypothetical protein YP_004430992.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cat:CA2559_01575 hypothetical protein YP_004430993.1 KEGG: gfo:GFO_2991 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_004430994.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: zpr:ZPR_3735 TrmH family tRNA/rRNA methyltransferase YP_004430995.1 KEGG: gfo:GFO_3585 hypothetical protein YP_004430996.1 KEGG: gfo:GFO_1893 secreted protein YP_004430997.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: cat:CA2559_02720 50S ribosomal protein L21; SMART: Helix-hairpin-helix DNA-binding class 1 YP_004430998.1 KEGG: zpr:ZPR_4482 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_004430999.1 KEGG: tet:TTHERM_00013220 hypothetical protein YP_004431000.1 KEGG: rbi:RB2501_05665 hypothetical protein YP_004431001.1 KEGG: cat:CA2559_09178 hypothetical protein YP_004431002.1 PFAM: GH3 auxin-responsive promoter; KEGG: cat:CA2559_12318 hypothetical protein YP_004431003.1 KEGG: gfo:GFO_2058 M12A family peptidase; PFAM: peptidase M12A astacin; Carbohydrate-binding family V/XII; SMART: peptidase metallopeptidase YP_004431004.1 KEGG: cat:CA2559_02790 hypothetical protein YP_004431005.1 KEGG: zpr:ZPR_4549 TatD-related DNase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_004431006.1 KEGG: zpr:ZPR_4548 phospholipid/glycerol acyltransferase YP_004431007.1 TIGRFAM: L-asparaginase, type I; KEGG: gfo:GFO_0086 L-asparaginase I; PFAM: Asparaginase/glutaminase YP_004431008.1 TIGRFAM: conserved repeat domain protein; KEGG: cat:CA2559_00005 transcriptional regulator, AraC family with parallel beta-helix repeat YP_004431009.1 TIGRFAM: membrane protein; KEGG: fjo:Fjoh_3972 hypothetical protein YP_004431010.1 PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; KEGG: fjo:Fjoh_3973 OmpA/MotB domain-containing protein YP_004431011.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: gfo:GFO_0088 ExbB-like MotA/TolQ/ExbB family biopolymer transport protein YP_004431012.1 KEGG: gfo:GFO_0089 membrane protein YP_004431013.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: gfo:GFO_0090 hypothetical protein YP_004431014.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: zpr:ZPR_4542 biopolymer transport protein ExbD/TolR YP_004431015.1 manually curated; KEGG: gfo:GFO_0092 secreted protein YP_004431016.1 manually curated; KEGG: gfo:GFO_0093 hypothetical protein YP_004431017.1 manually curated; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; KEGG: gfo:GFO_0094 RNA polymerase sigma-54 factor; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region YP_004431018.1 KEGG: gfo:GFO_2550 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004431019.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: zpr:ZPR_3760 FMN-binding split barrel domain-containing protein YP_004431020.1 PFAM: Methyltransferase type 12; KEGG: scl:sce5872 SAM-dependent methyltransferase YP_004431021.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: gfo:GFO_2710 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_004431022.1 PFAM: protein of unknown function DUF164; KEGG: cat:CA2559_07836 hypothetical protein YP_004431023.1 PFAM: protein of unknown function DUF34; KEGG: gfo:GFO_2707 hypothetical protein YP_004431024.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: cat:CA2559_07846 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_004431025.1 KEGG: gfo:GFO_2705 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide repeat YP_004431026.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; manually curated; KEGG: cat:CA2559_07856 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_004431027.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: cat:CA2559_07861 lipoyl synthase; PFAM: Radical SAM domain protein YP_004431028.1 KEGG: fps:FP0601 biotin--[acetyl-CoA-carboxylase] ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase YP_004431029.1 KEGG: gfo:GFO_2693 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_004431030.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: gfo:GFO_2694 cell division protease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41 YP_004431031.1 KEGG: gfo:GFO_2695 hypothetical protein YP_004431032.1 PFAM: phosphatidate cytidylyltransferase; KEGG: zpr:ZPR_0806 phosphatidate cytidylyltransferase YP_004431033.1 TIGRFAM: phosphatidylserine decarboxylase related protein; KEGG: cat:CA2559_07916 phosphatidylserine decarboxylase proenzyme; PFAM: phosphatidylserine decarboxylase-related YP_004431034.1 KEGG: gfo:GFO_2698 acyl-CoA binding protein YP_004431035.1 KEGG: fjo:Fjoh_2278 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_004431036.1 PFAM: protein of unknown function DUF1573; KEGG: rbi:RB2501_02385 hypothetical protein YP_004431037.1 PFAM: aminotransferase class I and II; KEGG: cat:CA2559_07891 aspartate aminotransferase YP_004431038.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: fjo:Fjoh_0218 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein YP_004431039.1 KEGG: fjo:Fjoh_2765 beta-Ig-H3/fasciclin; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin YP_004431040.1 KEGG: rbi:RB2501_02405 RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004431041.1 KEGG: rbi:RB2501_02410 hypothetical protein YP_004431042.1 KEGG: cat:CA2559_07876 hypothetical protein YP_004431043.1 PFAM: glycosyl transferase family 2; KEGG: fps:FP1465 glycosyl transferase, group 2 family protein YP_004431044.1 KEGG: gfo:GFO_2702 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004431045.1 KEGG: gfo:GFO_2079 hypothetical protein YP_004431046.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: zpr:ZPR_0894 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_004431047.1 PFAM: permease YjgP/YjgQ family protein; KEGG: zpr:ZPR_0895 predicted permease YP_004431048.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cat:CA2559_00855 predicted permease YP_004431049.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; KEGG: cat:CA2559_00850 acetyl-CoA carboxylase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_004431050.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: rbi:RB2501_12372 replicative DNA helicase; SMART: AAA ATPase YP_004431051.1 KEGG: acd:AOLE_03855 alkaline phosphatase D precursor(APaseD) YP_004431052.1 KEGG: cat:CA2559_00840 hypothetical protein YP_004431053.1 KEGG: gfo:GFO_2225 secreted protein YP_004431054.1 KEGG: cat:CA2559_06810 asparagine synthetase B YP_004431055.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: cat:CA2559_06815 asparagine synthetase B, glutamine-hydrolyzing protein; PFAM: asparagine synthase; glutamine amidotransferase class-II YP_004431056.1 PFAM: major royal jelly protein; KEGG: gbm:Gbem_1195 hypothetical protein YP_004431057.1 KEGG: dat:HRM2_10390 hypothetical protein YP_004431058.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: cat:CA2559_08146 multiple antibiotic resistance protein MarC YP_004431059.1 KEGG: gfo:GFO_2860 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_004431060.1 KEGG: gfo:GFO_2859 hypothetical protein YP_004431061.1 KEGG: cat:CA2559_05620 haloacid dehalogenase-like hydrolase protein; TIGRFAM: HAD superfamily (subfamily IA) hydrolase, TIGR02254; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004431062.1 KEGG: gfo:GFO_2857 secreted protein YP_004431063.1 KEGG: cat:CA2559_05630 hypothetical protein YP_004431064.1 KEGG: zpr:ZPR_3889 secreted protein YP_004431065.1 KEGG: cat:CA2559_05640 ATPase, AAA family protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_004431066.1 PFAM: Rhomboid family protein; KEGG: gfo:GFO_2853 hypothetical protein YP_004431067.1 KEGG: fjo:Fjoh_0406 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_004431068.1 KEGG: pfl:PFL_0133 calcium-binding outer membrane-like protein YP_004431069.1 KEGG: rbi:RB2501_09820 hypothetical protein YP_004431070.1 KEGG: rbi:RB2501_09825 hypothetical protein YP_004431071.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: rbi:RB2501_09830 hypothetical protein YP_004431072.1 KEGG: fba:FIC_00247 hypothetical protein YP_004431073.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: fba:FIC_00248 hypothetical protein YP_004431074.1 KEGG: mmu:100040941 predicted gene 3054 YP_004431075.1 PFAM: RagB/SusD domain protein; KEGG: bvu:BVU_2446 hypothetical protein YP_004431076.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: zpr:ZPR_0681 outer membrane protein, probably involved in nutrient binding YP_004431077.1 PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: cat:CA2559_05690 30S ribosomal protein S12 YP_004431078.1 KEGG: cat:CA2559_05695 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_004431079.1 KEGG: zpr:ZPR_3878 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_004431080.1 KEGG: cat:CA2559_05705 elongation factor EF-2; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_004431081.1 KEGG: zpr:ZPR_3876 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_004431082.1 KEGG: zpr:ZPR_3875 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_004431083.1 PFAM: ribosomal protein L4/L1e; KEGG: nve:NEMVE_v1g156663 hypothetical protein YP_004431084.1 PFAM: Ribosomal protein L25/L23; KEGG: fjo:Fjoh_0395 50S ribosomal protein L23 YP_004431085.1 KEGG: fps:FP1336 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_004431086.1 KEGG: rbi:RB2501_09875 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_004431087.1 KEGG: fjo:Fjoh_0392 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_004431088.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: gfo:GFO_2833 30S ribosomal protein S3; SMART: KH domain protein YP_004431089.1 KEGG: gfo:GFO_2832 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_004431090.1 KEGG: zpr:ZPR_3867 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_004431091.1 KEGG: cat:CA2559_05760 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_004431092.1 KEGG: cat:CA2559_05770 ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_004431093.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: gfo:GFO_2828 50S ribosomal protein L24; SMART: KOW domain protein YP_004431094.1 KEGG: rbi:RB2501_09915 50S ribosomal protein L5 YP_004431095.1 PFAM: ribosomal protein S14; KEGG: gfo:GFO_2826 30S ribosomal protein S14 YP_004431096.1 PFAM: ribosomal protein S8; KEGG: gfo:GFO_2825 30S ribosomal protein S8 YP_004431097.1 KEGG: gfo:GFO_2824 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_004431098.1 KEGG: coc:Coch_1163 ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_004431099.1 KEGG: gfo:GFO_2822 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein YP_004431100.1 KEGG: zpr:ZPR_3857 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_004431101.1 TIGRFAM: ribosomal protein L15; KEGG: gfo:GFO_2820 50S ribosomal protein L15 YP_004431102.1 KEGG: cat:CA2559_05820 preprotein translocase SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_004431103.1 KEGG: gfo:GFO_2818 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004431104.1 manually curated; TIGRFAM: ribosomal protein L36; KEGG: cat:CA2559_05830 ribosomal protein L36; PFAM: ribosomal protein L36 YP_004431105.1 KEGG: gfo:GFO_2817 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_004431106.1 KEGG: gfo:GFO_2816 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_004431107.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: gfo:GFO_2815 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_004431108.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: gfo:GFO_2814 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_004431109.1 KEGG: cat:CA2559_05855 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_004431110.1 KEGG: gfo:GFO_2917 secreted protein YP_004431111.1 KEGG: zpr:ZPR_3848 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain YP_004431113.1 TIGRFAM: enolase; KEGG: gfo:GFO_2809 phosphopyruvate hydratase; PFAM: Enolase-like YP_004431114.1 TIGRFAM: citrate synthase I; KEGG: cat:CA2559_05880 citrate synthase; PFAM: Citrate synthase YP_004431115.1 PFAM: transcription activator effector binding; KEGG: gfo:GFO_1750 effector binding transcriptional activator protein YP_004431116.1 PFAM: amidinotransferase; KEGG: cat:CA2559_05885 DdaH family protein YP_004431117.1 PFAM: protein of unknown function UCP032285; KEGG: zpr:ZPR_0710 MepB protein YP_004431118.1 TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: fjo:Fjoh_1742 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004431119.1 PFAM: protein of unknown function DUF885; KEGG: gfo:GFO_3071 hypothetical protein YP_004431120.1 PFAM: aminotransferase class I and II; KEGG: zpr:ZPR_0939 aspartate aminotransferase YP_004431121.1 KEGG: zpr:ZPR_0940 linoleoyl-CoA desaturase; PFAM: fatty acid desaturase YP_004431122.1 KEGG: cat:CA2559_07365 glucose-inhibited division protein; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_004431123.1 KEGG: cat:CA2559_06615 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004431124.1 KEGG: zpr:ZPR_3827 hypothetical protein YP_004431125.1 KEGG: gfo:GFO_2786 secreted protein YP_004431126.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; KEGG: gfo:GFO_2785 DNA primase; SMART: Toprim sub domain-containing protein YP_004431127.1 KEGG: zpr:ZPR_3824 two-component system response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004431128.1 TIGRFAM: NAD+ synthetase; KEGG: cat:CA2559_06585 NH(3)-dependent NAD synthetase YP_004431129.1 TIGRFAM: gliding motility-associated lipoprotein GldB; KEGG: zpr:ZPR_3822 gliding motility protein GldB YP_004431130.1 TIGRFAM: gliding motility-associated protein GldC; KEGG: fjo:Fjoh_1794 hypothetical protein YP_004431131.1 KEGG: gfo:GFO_2780 hypothetical protein YP_004431132.1 KEGG: gfo:GFO_2778 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_004431133.1 PFAM: alpha/beta hydrolase fold; KEGG: gfo:GFO_2777 alpha/beta fold hydrolase YP_004431134.1 KEGG: gfo:GFO_2776 MraZ protein; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_004431135.1 KEGG: cat:CA2559_06555 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_004431136.1 KEGG: zpr:ZPR_3814 secreted protein YP_004431137.1 PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; KEGG: cat:CA2559_06545 penicillin-binding protein; SMART: PASTA domain containing protein YP_004431138.1 KEGG: cat:CA2559_06540 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004431139.1 KEGG: cat:CA2559_06535 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004431140.1 KEGG: gfo:GFO_2770 UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004431141.1 PFAM: cell cycle protein; KEGG: cat:CA2559_06525 transmembrane rod-shape determining protein YP_004431142.1 KEGG: coc:Coch_2095 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_004431143.1 KEGG: fps:FP2056 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004431144.1 manually curated; KEGG: cat:CA2559_06510 cell division protein FtsQ YP_004431145.1 KEGG: zpr:ZPR_3805 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_004431146.1 KEGG: cat:CA2559_06500 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_004431147.1 KEGG: cat:CA2559_06495 YqeY family protein YP_004431148.1 PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; KEGG: cat:CA2559_13643 OmpA family protein YP_004431149.1 KEGG: rbi:RB2501_09445 hypothetical protein YP_004431150.1 KEGG: rbi:RB2501_09450 hypothetical protein YP_004431151.1 PFAM: flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: rbi:RB2501_09455 nitrate reductase/sulfite reductase flavoprotein alpha-component YP_004431152.1 KEGG: cat:CA2559_12208 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_004431153.1 PFAM: Anti-sigma K factor RskA; KEGG: cat:CA2559_12213 hypothetical protein YP_004431154.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: rbi:RB2501_00621 hypothetical protein YP_004431155.1 KEGG: cat:CA2559_12223 hypothetical protein YP_004431156.1 KEGG: rbi:RB2501_00631 hypothetical protein YP_004431157.1 KEGG: cat:CA2559_08946 hypothetical protein YP_004431158.1 KEGG: coc:Coch_0111 hypothetical protein YP_004431159.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: chu:CHU_1252 glycosyltransferase YP_004431160.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: fjo:Fjoh_1432 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004431161.1 KEGG: gfo:GFO_0379 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein YP_004431162.1 KEGG: cat:CA2559_07460 twin-arginine translocation protein TatA/E; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004431163.1 PFAM: O-methyltransferase family 3; KEGG: fps:FP2081 O-methyltransferase YP_004431164.1 PFAM: amidohydrolase 2; KEGG: cat:CA2559_07440 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase YP_004431165.1 PFAM: protein of unknown function DUF1648; KEGG: bld:BLi00244 hypothetical protein YP_004431166.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cat:CA2559_07435 short-chain dehydrogenase/reductase YP_004431167.1 PFAM: Aldehyde Dehydrogenase; KEGG: cat:CA2559_07430 hypothetical protein YP_004431168.1 PFAM: Endoribonuclease L-PSP; KEGG: cat:CA2559_07405 endoribonuclease L-PSP YP_004431169.1 KEGG: cat:CA2559_07400 hypothetical protein; PFAM: FAD dependent oxidoreductase YP_004431170.1 PFAM: Negative transcriptional regulator; KEGG: fjo:Fjoh_0220 FMN-binding negative transcriptional regulator YP_004431171.1 KEGG: cat:CA2559_07761 kynureninase; TIGRFAM: kynureninase; PFAM: aminotransferase class V YP_004431172.1 KEGG: sli:Slin_3973 hypothetical protein YP_004431173.1 PFAM: major facilitator superfamily MFS_1; KEGG: rbi:RB2501_02485 major facilitator superfamily MFS_1 YP_004431174.1 PFAM: Radical SAM domain protein; KEGG: zpr:ZPR_3795 radical SAM superfamily protein YP_004431175.1 KEGG: gfo:GFO_2746 bifunctional preprotein translocase subunit SecD/SecF; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein YP_004431176.1 manually curated; KEGG: ckr:CKR_2881 hypothetical protein YP_004431177.1 KEGG: zpr:ZPR_3792 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_004431178.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: cat:CA2559_06825 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein YP_004431179.1 KEGG: rbi:RB2501_00571 hypothetical protein YP_004431180.1 KEGG: cqu:CpipJ_CPIJ010070 hypothetical protein YP_004431181.1 PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: cat:CA2559_05595 L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase YP_004431182.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: fjo:Fjoh_4980 signal recognition particle-docking protein FtsY; SMART: AAA ATPase YP_004431183.1 KEGG: acd:AOLE_03395 gamma-aminobutyrate permease YP_004431184.1 PFAM: Amidase; KEGG: cat:CA2559_05965 amidase YP_004431185.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: cat:CA2559_13538 Fe-S oxidoreductase; SMART: Elongator protein 3/MiaB/NifB YP_004431186.1 KEGG: cat:CA2559_13533 BNR repeat protein YP_004431187.1 KEGG: gfo:GFO_2233 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A YP_004431188.1 PFAM: protein of unknown function UCP012535; KEGG: fjo:Fjoh_4974 hypothetical protein YP_004431189.1 KEGG: pyo:PY00619 hypothetical protein YP_004431190.1 KEGG: fba:FIC_01215 hypothetical protein YP_004431191.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ere:EUBREC_3002 RNA methyltransferase, TrmH family, group 2 YP_004431192.1 KEGG: zpr:ZPR_2202 hypothetical protein YP_004431193.1 PFAM: peptidase M24; KEGG: mxa:MXAN_0764 M24 family peptidase YP_004431194.1 PFAM: glycosyl transferase family 2; KEGG: rbi:RB2501_15434 glycosyl transferase, group 2 family protein YP_004431195.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: caa:Caka_2300 NAD-dependent epimerase/dehydratase YP_004431196.1 PFAM: fatty acid hydroxylase; KEGG: cat:CA2559_00925 beta carotene hydroxylase YP_004431197.1 PFAM: Squalene/phytoene synthase; KEGG: zpr:ZPR_0875 phytoene synthase YP_004431198.1 KEGG: rbi:RB2501_11847 phytoene dehydrogenase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase YP_004431199.1 KEGG: gfo:GFO_2498 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_004431200.1 KEGG: gfo:GFO_2407 shikimate kinase; PFAM: shikimate kinase YP_004431201.1 PFAM: phosphoribosyltransferase; KEGG: zpr:ZPR_0888 pyrimidine regulatory protein PyrR YP_004431202.1 KEGG: gfo:GFO_2404 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004431203.1 KEGG: cat:CA2559_00880 hypothetical protein YP_004431204.1 KEGG: gfo:GFO_0593 secreted protein YP_004431205.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: cat:CA2559_00875 transketolase, C-terminal subunit YP_004431206.1 PFAM: Transketolase domain-containing protein; KEGG: zpr:ZPR_0893 transketolase N terminal section YP_004431207.1 KEGG: fps:FP0664 hypothetical protein YP_004431208.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: cat:CA2559_07951 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004431209.1 PFAM: NUDIX hydrolase; KEGG: cat:CA2559_07956 AP4A hydrolase YP_004431210.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: cat:CA2559_07966 hypothetical protein YP_004431211.1 KEGG: gfo:GFO_2677 hypothetical protein YP_004431212.1 KEGG: pmy:Pmen_1540 TPR repeat-containing protein YP_004431213.1 KEGG: rmr:Rmar_1662 hypothetical protein YP_004431214.1 PFAM: protein of unknown function DUF328; KEGG: zpr:ZPR_0823 hypothetical protein YP_004431215.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: cat:CA2559_08006 ribosomal large subunit pseudouridine synthase D; SMART: RNA-binding S4 domain protein YP_004431216.1 KEGG: cat:CA2559_08001 hypothetical protein; PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein YP_004431217.1 manually curated; KEGG: cat:CA2559_07996 D-alanylalanine synthetase; PFAM: D-alanine--D-alanine ligase domain protein YP_004431218.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: cat:CA2559_07991 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_004431219.1 KEGG: cat:CA2559_08021 hypothetical protein YP_004431220.1 KEGG: fjo:Fjoh_4899 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain YP_004431221.1 KEGG: gfo:GFO_2673 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004431222.1 manually curated; KEGG: nve:NEMVE_v1g157208 hypothetical protein; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_004431223.1 KEGG: deg:DehalGT_1354 prephenate dehydratase YP_004431224.1 KEGG: zpr:ZPR_0832 indole-3-glycerolphosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_004431225.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: cat:CA2559_06395 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_004431226.1 KEGG: fjo:Fjoh_4296 hypothetical protein YP_004431227.1 KEGG: cat:CA2559_06400 anthranilate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004431228.1 PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: fps:FP0513 anthranilate synthase component I YP_004431229.1 PFAM: YceI family protein; KEGG: zpr:ZPR_0836 hypothetical protein YP_004431230.1 KEGG: gfo:GFO_2665 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004431231.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cat:CA2559_06420 thiol:disulfide interchange protein TlpA YP_004431232.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cat:CA2559_06425 hypothetical protein YP_004431233.1 KEGG: cat:CA2559_06430 metallo-beta-lactamase superfamily protein YP_004431234.1 KEGG: rbi:RB2501_02165 rhodanese-like domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004431235.1 KEGG: cat:CA2559_06440 lipoprotein, PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004431236.1 KEGG: rbi:RB2501_15404 di-heme cytochrome c peroxidase family protein; PFAM: Di-haem cytochrome c peroxidase YP_004431237.1 KEGG: rbi:RB2501_15409 hypothetical protein YP_004431238.1 KEGG: ath:AT5G37400 hypothetical protein YP_004431239.1 KEGG: gfo:GFO_3110 membrane protein YP_004431240.1 PFAM: TrkA-C domain protein; KEGG: cat:CA2559_00495 hypothetical protein YP_004431241.1 KEGG: mgi:Mflv_4403 zinc/iron permease YP_004431242.1 PFAM: sodium/hydrogen exchanger; KEGG: zpr:ZPR_2340 Na+/H+ antiporter, CPA1 family protein YP_004431243.1 KEGG: tte:TTE2031 DNA repair ATPase YP_004431244.1 PFAM: Aldose 1-epimerase; KEGG: gfo:GFO_2156 aldose 1-epimerase YP_004431245.1 KEGG: erw:ERWE_CDS_01540 iron(III)-transport system permease protein FbpB 2 YP_004431246.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gfo:GFO_1941 DNA gyrase modulator family protein YP_004431247.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gfo:GFO_1940 DNA gyrase modulator family protein YP_004431248.1 KEGG: chu:CHU_0726 hypothetical protein YP_004431249.1 KEGG: gfo:GFO_1939 hypothetical protein YP_004431250.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: gfo:GFO_1938 MoxR-like AAA family ATPase YP_004431251.1 PFAM: protein of unknown function DUF58; KEGG: gfo:GFO_1937 hypothetical protein YP_004431252.1 TIGRFAM: conserved hypothetical protein; KEGG: gfo:GFO_1936 hypothetical protein YP_004431253.1 KEGG: gfo:GFO_1935 hypothetical protein YP_004431254.1 KEGG: gfo:GFO_1934 hypothetical protein YP_004431255.1 KEGG: vfm:VFMJ11_A0633 hypothetical protein YP_004431256.1 KEGG: nwi:Nwi_2333 hypothetical protein YP_004431257.1 KEGG: coc:Coch_1373 hypothetical protein YP_004431258.1 PFAM: response regulator receiver; KEGG: gfo:GFO_2621 response regulator receiver domain-containing protein YP_004431259.1 PFAM: ATP-binding region ATPase domain protein; KEGG: zpr:ZPR_1615 two-component system sensor histidine kinase YP_004431260.1 PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein; KEGG: mmu:268756 gulonolactone (L-) oxidase YP_004431261.1 KEGG: gfo:GFO_2135 beta-phosphoglucomutase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004431263.1 KEGG: pfa:MAL7P1.17 conserved Plasmodium membrane protein, unknown function YP_004431264.1 KEGG: cat:CA2559_00210 hypothetical saccharopine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_004431265.1 PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: cat:CA2559_08971 possible epimerase, NAD dependent epimerase family protein YP_004431266.1 PFAM: YceI family protein; KEGG: cat:CA2559_08246 YCE I like family protein YP_004431267.1 PFAM: GrpE protein; KEGG: zpr:ZPR_3122 molecular chaperone GrpE YP_004431268.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: cat:CA2559_08256 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_004431269.1 KEGG: gfo:GFO_0506 ABC-type transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004431270.1 KEGG: gfo:GFO_0507 ABC-type transporter permease protein YP_004431271.1 PFAM: MscS Mechanosensitive ion channel; KEGG: zpr:ZPR_3117 small-conductance mechanosensitive ion channel protein YP_004431272.1 KEGG: gfo:GFO_0509 hypothetical protein YP_004431273.1 KEGG: cat:CA2559_08281 two component, sigma54 specific, transcriptional regulator, fis family protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase YP_004431274.1 PFAM: protein of unknown function DUF344; KEGG: cat:CA2559_12063 hypothetical protein YP_004431275.1 PFAM: peptidase M28; KEGG: rbi:RB2501_11227 peptidase, M28D family protein YP_004431276.1 KEGG: zpr:ZPR_0819 hypothetical protein YP_004431277.1 KEGG: mbu:Mbur_0455 hypothetical protein YP_004431278.1 KEGG: zpr:ZPR_3045 NorM-like multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004431279.1 KEGG: zpr:ZPR_3044 hypothetical protein YP_004431280.1 KEGG: cat:CA2559_09156 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004431281.1 SMART: AAA ATPase; manually curated; TIGRFAM: LAO/AO transport system ATPase; KEGG: fjo:Fjoh_5021 LAO/AO transport system ATPase; PFAM: ArgK protein YP_004431282.1 KEGG: gfo:GFO_3029 hypothetical protein YP_004431283.1 KEGG: gfo:GFO_0520 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004431284.1 KEGG: cat:CA2559_09131 hypothetical protein YP_004431285.1 KEGG: gfo:GFO_0522 secreted protein YP_004431286.1 PFAM: Peptidase M23; KEGG: fba:FIC_01420 M23/M37 peptidase/aminotransferase, class III YP_004431287.1 KEGG: gfo:GFO_2353 haloacid dehalogenase-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004431288.1 KEGG: gfo:GFO_0530 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold YP_004431289.1 PFAM: Protein of unknown function DUF2795; KEGG: gfo:GFO_0531 hypothetical protein YP_004431290.1 TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: cat:CA2559_09091 hypothetical protein; PFAM: cobalamin adenosyltransferase YP_004431291.1 KEGG: cat:CA2559_12893 hypothetical protein YP_004431292.1 KEGG: cat:CA2559_12888 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004431293.1 KEGG: fps:FP0585 hypothetical protein YP_004431294.1 KEGG: cat:CA2559_07215 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004431295.1 KEGG: gfo:GFO_0539 polysaccharide export outer membrane protein YP_004431296.1 KEGG: gfo:GFO_0540 Ptk-like tyrosine-protein kinase; TIGRFAM: capsular exopolysaccharide family YP_004431297.1 PFAM: ABC-2 type transporter; KEGG: zpr:ZPR_1094 O-antigen export system permease protein YP_004431298.1 KEGG: acp:A2cp1_3255 LPS biosynthesis related glycosyltransferase YP_004431299.1 KEGG: cat:CA2559_07245 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004431300.1 TIGRFAM: methyltransferase FkbM family; KEGG: sli:Slin_5205 methyltransferase FkbM family YP_004431301.1 PFAM: glycosyl transferase family 2; KEGG: fjo:Fjoh_2515 glycosyl transferase family protein YP_004431302.1 PFAM: glycosyl transferase family 2; KEGG: gfo:GFO_0560 glycosyl transferase family protein YP_004431303.1 PFAM: glycosyl transferase family 2; KEGG: fjo:Fjoh_0314 glycosyl transferase family protein YP_004431304.1 PFAM: glycosyl transferase family 2; KEGG: gfo:GFO_0560 glycosyl transferase family protein YP_004431305.1 PFAM: glycosyl transferase family 2; KEGG: gfo:GFO_0560 glycosyl transferase family protein YP_004431306.1 PFAM: glycosyl transferase family 2; KEGG: cat:CA2559_07290 hypothetical protein YP_004431307.1 TIGRFAM: methyltransferase FkbM family; KEGG: gme:Gmet_2335 methyltransferase FkbM YP_004431308.1 PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: stl:stu1098 exopolysaccharide biosynthesis protein, glycosyltransferase YP_004431309.1 PFAM: glycosyl transferase group 1; KEGG: ppd:Ppro_1421 glycosyl transferase, group 1 YP_004431310.1 PFAM: glycosyl transferase group 1; KEGG: zpr:ZPR_1105 glycosyl transferase, group 1 YP_004431311.1 PFAM: glycosyl transferase family 2; KEGG: fps:FP1258 glycosyl transferase, group 2 family protein YP_004431312.1 KEGG: amr:AM1_1237 TPR domain-containing protein YP_004431313.1 KEGG: pph:Ppha_2494 hypothetical protein YP_004431314.1 KEGG: cat:CA2559_06120 acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: acylneuraminate cytidylyltransferase YP_004431315.1 KEGG: cat:CA2559_07305 N-acetylneuraminic acid phosphate synthase; PFAM: N-acetylneuraminic acid synthase domain YP_004431316.1 KEGG: cat:CA2559_07310 hypothetical protein YP_004431317.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: fjo:Fjoh_0302 membrane bound O-acyl transferase, MBOAT family protein YP_004431318.1 KEGG: fjo:Fjoh_0300 hypothetical protein YP_004431319.1 KEGG: fjo:Fjoh_0301 hypothetical protein YP_004431320.1 PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_0299 glycosyl transferase, group 1 YP_004431321.1 PFAM: glycosyl transferase family 2; KEGG: cat:CA2559_07320 hypothetical protein YP_004431322.1 PFAM: glycosyl transferase family 2; KEGG: fps:FP1250 glycosyl transferase, group 2 family protein YP_004431323.1 KEGG: zpr:ZPR_1120 serine acetyltransferase-like protein YP_004431324.1 PFAM: glycosyl transferase group 1; KEGG: fps:FP1247 glycosyl transferase, group 1 family protein YP_004431325.1 PFAM: glycosyl transferase group 1; KEGG: cat:CA2559_12403 glycosyl transferase, group 1 YP_004431326.1 KEGG: cat:CA2559_12398 hypothetical protein YP_004431327.1 PFAM: glycosyl transferase group 1; KEGG: gfo:GFO_0583 glycosyl transferases group 1 YP_004431328.1 KEGG: gfo:GFO_0585 sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_004431329.1 KEGG: rbi:RB2501_11697 hypothetical protein YP_004431330.1 KEGG: zpr:ZPR_1646 hypothetical protein YP_004431331.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: zpr:ZPR_1645 succinyl-CoA synthetase beta chain; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_004431332.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: cat:CA2559_13473 hypothetical protein YP_004431333.1 PFAM: ribosomal L11 methyltransferase; KEGG: fjo:Fjoh_3507 ribosomal protein L11 methyltransferase YP_004431334.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: cat:CA2559_05875 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_004431335.1 TIGRFAM: triosephosphate isomerase; KEGG: zpr:ZPR_0982 triosephosphate isomerase; PFAM: triosephosphate isomerase YP_004431336.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cat:CA2559_13493 peptide ABC transporter, permease protein YP_004431337.1 PFAM: DoxX family protein; KEGG: rbi:RB2501_10612 hypothetical protein YP_004431338.1 PFAM: protein of unknown function DUF1599; KEGG: cat:CA2559_13503 hypothetical protein YP_004431339.1 TIGRFAM: dihydropteroate synthase; KEGG: fps:FP1425 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_004431340.1 KEGG: cat:CA2559_00775 iron-regulated protein FrpC YP_004431341.1 KEGG: cat:CA2559_00170 ATP-binding protein involved in cell division; PFAM: ABC transporter related; SMART: AAA ATPase YP_004431342.1 PFAM: glycosyl transferase family 2; KEGG: fjo:Fjoh_2244 glycosyl transferase family protein YP_004431343.1 PFAM: glycosyl transferase family 2; KEGG: cat:CA2559_00155 fucosyl transferase YP_004431344.1 PFAM: WxcM-like domain-containing protein; KEGG: fjo:Fjoh_2242 WxcM domain-containing protein YP_004431345.1 PFAM: glycosyl transferase group 1; KEGG: fps:FP1864 glycosyl transferase, group 1 family protein YP_004431346.1 PFAM: glycosyl transferase group 1; KEGG: fps:FP1865 glycosyl transferase WbsE YP_004431347.1 KEGG: sdl:Sdel_1780 acetyltransferase YP_004431348.1 PFAM: polysaccharide biosynthesis protein; KEGG: cat:CA2559_09393 lipopolysaccharide biosynthesis protein YP_004431349.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cat:CA2559_09388 aminotransferase, DegT/DnrJ/EryC1/StrS family protein YP_004431350.1 manually curated; KEGG: fjo:Fjoh_2236 hypothetical protein YP_004431351.1 KEGG: zpr:ZPR_3619 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004431352.1 PFAM: nucleoside diphosphate kinase; KEGG: zpr:ZPR_1690 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_004431353.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: zpr:ZPR_1688 phosphoesterase domain-containing protein YP_004431354.1 KEGG: zpr:ZPR_1687 gliding motility protein GldI; TIGRFAM: peptidyl-prolyl isomerase, gliding motility-associated; PFAM: peptidylprolyl isomerase FKBP-type YP_004431355.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; peptidylprolyl isomerase FKBP-type; KEGG: gfo:GFO_0786 cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase YP_004431356.1 TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: cat:CA2559_12668 aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004431357.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gfo:GFO_0587 CDP-diacylglycerol-serine O-phosphatidyltransferase YP_004431358.1 KEGG: cat:CA2559_12378 hypothetical protein YP_004431359.1 KEGG: cat:CA2559_00775 iron-regulated protein FrpC YP_004431360.1 KEGG: fjo:Fjoh_0027 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_004431361.1 KEGG: gfo:GFO_0603 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35 YP_004431362.1 KEGG: coc:Coch_0993 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_004431363.1 KEGG: zpr:ZPR_3614 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein YP_004431364.1 KEGG: rbi:RB2501_04555 DNA polymerase III alpha subunit YP_004431365.1 KEGG: zpr:ZPR_1849 hypothetical protein YP_004431366.1 PFAM: zinc/iron permease; KEGG: zpr:ZPR_1850 ZIP family metal transporter YP_004431367.1 KEGG: zpr:ZPR_1851 RNA methylase family protein; PFAM: RNA methylase; THUMP domain-containing protein YP_004431368.1 KEGG: cat:CA2559_08566 hypothetical protein YP_004431369.1 KEGG: gfo:GFO_1888 hypothetical protein YP_004431370.1 KEGG: gfo:GFO_1887 tRNA (uracil-5-)-methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; deoxyribonuclease/rho motif-related TRAM; methyltransferase small YP_004431371.1 KEGG: cat:CA2559_08581 acetylornithine aminotransferase, TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III YP_004431372.1 KEGG: cat:CA2559_08586 hypothetical protein YP_004431373.1 KEGG: cat:CA2559_08591 hypothetical protein YP_004431374.1 KEGG: cat:CA2559_08596 hypothetical protein YP_004431375.1 KEGG: cat:CA2559_08606 hypothetical protein YP_004431376.1 KEGG: cat:CA2559_08611 hypothetical protein YP_004431377.1 KEGG: cat:CA2559_08616 iron-sulfur cofactor synthesis protein; PFAM: aminotransferase class V YP_004431378.1 KEGG: cat:CA2559_06685 hypothetical protein YP_004431379.1 PFAM: Peptidase M23; KEGG: cat:CA2559_06690 hypothetical protein YP_004431380.1 KEGG: rbi:RB2501_12432 hypothetical protein YP_004431381.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: rbi:RB2501_12437 hypothetical protein YP_004431382.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: cat:CA2559_06770 isocitrate dehydrogenase (NADP); PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type YP_004431383.1 KEGG: gfo:GFO_0619 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_004431384.1 KEGG: gfo:GFO_2731 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_004431385.1 TIGRFAM: prolyl-tRNA synthetase; KEGG: zpr:ZPR_3781 prolyl-tRNA synthetase; PFAM: Prolyl-tRNA synthetase, class II-like; Anticodon-binding domain protein; tRNA synthetase class II (G H P and S) YP_004431386.1 KEGG: rbi:RB2501_10527 prolyl-tRNA synthetase YP_004431387.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cat:CA2559_01060 hemin receptor YP_004431388.1 PFAM: NADPH-dependent FMN reductase; KEGG: cat:CA2559_09863 hypothetical protein YP_004431389.1 KEGG: fjo:Fjoh_1398 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004431390.1 KEGG: fjo:Fjoh_2785 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase YP_004431391.1 KEGG: cat:CA2559_09623 probable DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004431392.1 KEGG: gfo:GFO_1444 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_004431393.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: zpr:ZPR_2526 RecQ-like DEAD box helicase family protein; SMART: DEAD-like helicase ; helicase domain protein YP_004431394.1 KEGG: fjo:Fjoh_0136 ATPase-like protein YP_004431395.1 KEGG: zpr:ZPR_2528 hypothetical protein YP_004431396.1 manually curated; KEGG: cat:CA2559_09598 hypothetical protein YP_004431397.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: cat:CA2559_09593 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004431398.1 KEGG: aav:Aave_1298 glycerophosphoryl diester phosphodiesterase; manually curated; PFAM: glycerophosphoryl diester phosphodiesterase YP_004431399.1 TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: zpr:ZPR_2038 possible 2-methylthioadenine synthetase; SMART: Elongator protein 3/MiaB/NifB YP_004431400.1 KEGG: rbi:RB2501_15759 GCN5-related N-acetyltransferase YP_004431401.1 KEGG: fjo:Fjoh_2376 hypothetical protein YP_004431402.1 PFAM: thioesterase superfamily protein; KEGG: cat:CA2559_09903 hypothetical protein YP_004431403.1 KEGG: gfo:GFO_2076 isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like YP_004431404.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; KEGG: gfo:GFO_2075 menaquinone biosynthesis protein MenD; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein YP_004431405.1 KEGG: hba:Hbal_0441 hypothetical protein YP_004431406.1 KEGG: fjo:Fjoh_2783 hypothetical protein YP_004431407.1 KEGG: gfo:GFO_1501 hypothetical protein YP_004431408.1 PFAM: peptidase C1A papain; KEGG: cat:CA2559_10538 hypothetical protein YP_004431409.1 KEGG: zpr:ZPR_1722 naphthoate synthase (dihydroxynaphtoic acid synthetase); TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase YP_004431410.1 PFAM: peptidase M42 family protein; KEGG: cat:CA2559_09738 hydrolase YP_004431411.1 KEGG: gfo:GFO_1901 hypothetical protein YP_004431412.1 KEGG: cat:CA2559_09748 hypothetical protein YP_004431413.1 KEGG: zpr:ZPR_3606 membrane protein YP_004431414.1 KEGG: fjo:Fjoh_2490 N-acetylmuramic acid-6-phosphate etherase; TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS) YP_004431415.1 KEGG: zpr:ZPR_1865 hypothetical protein YP_004431416.1 KEGG: gfo:GFO_1876 hypothetical protein YP_004431417.1 TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; KEGG: gfo:GFO_1875 phosphodiesterase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_004431418.1 PFAM: GCN5-related N-acetyltransferase; KEGG: zpr:ZPR_2798 acetyltransferase (GNAT) family protein YP_004431419.1 TIGRFAM: argininosuccinate synthase; KEGG: gfo:GFO_2107 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_004431420.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: gfo:GFO_2106 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_004431421.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: zpr:ZPR_2795 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004431422.1 PFAM: aminotransferase class-III; KEGG: rbi:RB2501_08690 acetylornithine aminotransferase YP_004431423.1 PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: gfo:GFO_2103 N-acetylornithine carbamoyltransferase YP_004431424.1 KEGG: fjo:Fjoh_3429 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004431425.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rbi:RB2501_08675 acetylornithine deacetylase YP_004431426.1 KEGG: gfo:GFO_2099 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004431427.1 KEGG: rbi:RB2501_07165 hypothetical protein YP_004431428.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: gfo:GFO_2098 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004431429.1 KEGG: zpr:ZPR_1692 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004431430.1 KEGG: gfo:GFO_2096 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein YP_004431431.1 PFAM: pyruvate carboxyltransferase; KEGG: zpr:ZPR_1694 2-isopropylmalate synthase YP_004431432.1 KEGG: rbi:RB2501_15794 hypothetical protein YP_004431433.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gfo:GFO_2093 hypothetical protein YP_004431434.1 PFAM: pseudouridine synthase; KEGG: cat:CA2559_10688 ribosomal large subunit pseudouridine synthase D YP_004431435.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: cat:CA2559_10683 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_004431436.1 KEGG: zpr:ZPR_1704 molecular chaperone DnaK YP_004431437.1 KEGG: dfe:Dfer_1852 hypothetical protein YP_004431438.1 TIGRFAM: L-serine dehydratase 1; KEGG: cat:CA2559_10673 L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_004431439.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rbi:RB2501_06405 N-acetyltransferase, GNAT family protein YP_004431440.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: gfo:GFO_1967 S10 family carboxypeptidase YP_004431441.1 KEGG: cat:CA2559_09828 hypothetical protein YP_004431442.1 KEGG: cat:CA2559_09833 fumarate hydratase YP_004431443.1 PFAM: amidohydrolase; KEGG: zpr:ZPR_2069 amidohydrolase family protein YP_004431444.1 KEGG: rbi:RB2501_11392 hypothetical protein YP_004431445.1 PFAM: heat shock protein Hsp20; KEGG: gfo:GFO_2294 HSP20-like chaperone YP_004431446.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: gfo:GFO_2292 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein YP_004431447.1 PFAM: aminotransferase class-III; KEGG: cat:CA2559_06750 ornithine aminotransferase YP_004431448.1 KEGG: cat:CA2559_12833 hypothetical protein YP_004431449.1 KEGG: zpr:ZPR_2047 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_004431450.1 KEGG: cat:CA2559_12823 carbamoyl-phosphate synthase, large (or ammonia) subunit (CarB); TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation YP_004431451.1 KEGG: zpr:ZPR_0496 secreted protein YP_004431452.1 KEGG: cat:CA2559_12813 hypothetical protein YP_004431453.1 PFAM: protein of unknown function DUF195; KEGG: fps:FP1992 DNA recombination protein RmuC YP_004431454.1 PFAM: Protein of unknown function DUF2130; KEGG: phe:Phep_0462 hypothetical protein YP_004431455.1 KEGG: msy:MS53_0174 P60-like lipoprotein YP_004431456.1 KEGG: gfo:GFO_1082 ABC-type transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004431457.1 PFAM: transport system permease protein; KEGG: gfo:GFO_1083 ABC-type transporter permease protein YP_004431458.1 PFAM: periplasmic binding protein; KEGG: zpr:ZPR_2059 ABC-type transporter periplasmic binding protein YP_004431459.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cat:CA2559_12508 TonB-dependent outer membrane receptor YP_004431460.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: cat:CA2559_12503 surface layer protein YP_004431461.1 KEGG: cat:CA2559_09693 hypothetical protein; PFAM: peptidase S41; SMART: peptidase S41 YP_004431462.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cat:CA2559_01565 TonB-dependent receptor YP_004431463.1 KEGG: lba:Lebu_0946 helicase domain protein YP_004431464.1 PFAM: Uncharacterised conserved protein UCP016719; KEGG: zpr:ZPR_1141 secreted protein containing DUF1343 YP_004431465.1 PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_2398 lipoprotein releasing system transmembrane protein YP_004431466.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: cat:CA2559_02435 peptidase M1 family protein YP_004431467.1 KEGG: gfo:GFO_2324 hypothetical protein YP_004431468.1 TIGRFAM: Beta-carotene 15,15'-monooxygenase, Brp/Blh family; KEGG: pub:SAR11_0123 transmembrane protein YP_004431469.1 PFAM: rhodopsin; KEGG: sli:Slin_1643 rhodopsin YP_004431470.1 KEGG: str:Sterm_3566 hypothetical protein YP_004431471.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mxa:MXAN_5165 GMC oxidoreductase family protein YP_004431472.1 KEGG: zpr:ZPR_0971 membrane protein YP_004431473.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: cat:CA2559_01045 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_004431474.1 PFAM: sulphate transporter; KEGG: cps:CPS_4141 sulfate permease family protein YP_004431475.1 KEGG: rbi:RB2501_09420 hypothetical protein YP_004431476.1 KEGG: pgn:PGN_0537 probable transcriptional regulator Crp family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp YP_004431477.1 KEGG: hvo:HVO_A0613 hypothetical protein YP_004431478.1 KEGG: fjo:Fjoh_4914 hypothetical protein YP_004431479.1 PFAM: histidine kinase internal region; KEGG: rbi:RB2501_00661 hypothetical protein YP_004431480.1 PFAM: Integral membrane protein TerC; KEGG: coc:Coch_1231 integral membrane protein TerC YP_004431481.1 KEGG: cat:CA2559_10443 hypothetical protein YP_004431482.1 KEGG: zpr:ZPR_2721 HTH_3 family transcriptional regulator protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004431483.1 KEGG: fjo:Fjoh_2804 peptidase M14, carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A YP_004431484.1 KEGG: gfo:GFO_1486 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004431485.1 KEGG: cat:CA2559_10423 hypothetical protein YP_004431486.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: fjo:Fjoh_2812 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_004431487.1 PFAM: Proline dehydrogenase; KEGG: fps:FP1706 antibiotic resistance protein YP_004431488.1 PFAM: small multidrug resistance protein; KEGG: gfo:GFO_0013 small multidrug resistance protein YP_004431489.1 KEGG: tps:THAPSDRAFT_24035 hypothetical protein YP_004431490.1 KEGG: cho:Chro.80327 notch receptor protein YP_004431491.1 KEGG: gfo:GFO_2652 hypothetical protein YP_004431492.1 PFAM: sodium/hydrogen exchanger; KEGG: zpr:ZPR_0779 sodium/hydrogen exchanger YP_004431493.1 KEGG: gka:GK0525 hypothetical protein YP_004431494.1 KEGG: oih:OB1010 sigma-L-dependent transcriptional regulator YP_004431495.1 KEGG: cat:CA2559_06915 hypothetical protein YP_004431496.1 PFAM: esterase; KEGG: sli:Slin_2109 esterase YP_004431497.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pmo:Pmob_1269 RNA-directed DNA polymerase (reverse transcriptase) YP_004431498.1 KEGG: zpr:ZPR_2707 hypothetical protein YP_004431499.1 KEGG: lma:LmjF24.0090 hypothetical protein YP_004431500.1 KEGG: pfh:PFHG_04541 conserved hypothetical protein YP_004431501.1 KEGG: pmm:PMM1539 adenylate kinase YP_004431502.1 KEGG: pkn:PKH_090490 hypothetical protein YP_004431503.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pmo:Pmob_1269 RNA-directed DNA polymerase (reverse transcriptase) YP_004431504.1 KEGG: cat:CA2559_06915 hypothetical protein YP_004431505.1 KEGG: aag:AaeL_AAEL009157 RHO GTPase activator YP_004431506.1 KEGG: dfe:Dfer_5063 NUMOD4 domain-containing protein YP_004431507.1 PFAM: integrase family protein; KEGG: fps:FP2136 integrase/recombinase YP_004431508.1 KEGG: rbi:RB2501_01995 hypothetical protein YP_004431509.1 KEGG: zpr:ZPR_1179 hypothetical protein YP_004431510.1 PFAM: protein of unknown function DUF819; KEGG: cat:CA2559_07490 hypothetical protein YP_004431511.1 KEGG: rbi:RB2501_01975 membrane associated hydrolase YP_004431512.1 PFAM: peptidase M61 domain protein; KEGG: zpr:ZPR_2276 M61 family glycyl aminopeptidase YP_004431513.1 KEGG: fjo:Fjoh_1717 alpha/beta hydrolase fold YP_004431514.1 PFAM: S1/P1 nuclease; KEGG: cat:CA2559_07475 S1/P1 nuclease YP_004431515.1 KEGG: cpi:Cpin_2635 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004431516.1 KEGG: cat:CA2559_07515 hypothetical protein YP_004431517.1 KEGG: cat:CA2559_07520 hypothetical protein YP_004431518.1 manually curated; KEGG: rbi:RB2501_12929 3-beta hydroxysteroid dehydrogenase/isomerase YP_004431519.1 KEGG: fjo:Fjoh_2562 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_004431520.1 KEGG: mhu:Mhun_0418 PKD YP_004431521.1 TIGRFAM: threonine synthase; KEGG: rbi:RB2501_12939 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004431522.1 KEGG: cat:CA2559_08791 hypothetical protein YP_004431523.1 KEGG: zpr:ZPR_3059 DNA binding helix-turn helix protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004431524.1 KEGG: cat:CA2559_12598 hypothetical protein YP_004431525.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cat:CA2559_08786 rRNA methylase YP_004431526.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: zpr:ZPR_2422 cyclophilin-type peptidyl-prolyl cis-trans isomerase YP_004431527.1 PFAM: NUDIX hydrolase; KEGG: gfo:GFO_1006 NUDIX domain-containing protein YP_004431528.1 KEGG: cat:CA2559_09308 hypothetical protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004431529.1 KEGG: cat:CA2559_08286 hypothetical protein YP_004431530.1 KEGG: zpr:ZPR_2425 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004431531.1 PFAM: TonB-dependent receptor plug; KEGG: fjo:Fjoh_4916 TonB-dependent receptor, plug YP_004431532.1 KEGG: sus:Acid_3356 Cna B domain-containing protein YP_004431533.1 PFAM: protein of unknown function DUF124; KEGG: rbi:RB2501_00726 hypothetical protein YP_004431534.1 KEGG: zpr:ZPR_2409 hypothetical protein YP_004431535.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cat:CA2559_08961 transcriptional regulator, LysR family protein YP_004431536.1 PFAM: Protein of unknown function DUF2141; KEGG: rbi:RB2501_00691 hypothetical protein YP_004431537.1 PFAM: oxidoreductase domain protein; KEGG: gfo:GFO_1818 oxidoreductase domain-containing protein YP_004431538.1 PFAM: Na+/solute symporter; KEGG: gfo:GFO_1817 Na+/solute symporter YP_004431539.1 PFAM: LmbE family protein; KEGG: cat:CA2559_12028 hypothetical protein YP_004431540.1 PFAM: MscS Mechanosensitive ion channel; KEGG: zpr:ZPR_2321 small-conductance mechanosensitive ion channel protein YP_004431541.1 KEGG: cat:CA2559_10618 magnesium and cobalt transport protein; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_004431542.1 KEGG: gfo:GFO_1814 hypothetical protein YP_004431543.1 KEGG: cat:CA2559_12013 Maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004431544.1 PFAM: UbiA prenyltransferase; KEGG: gfo:GFO_1812 prenyltransferase YP_004431545.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: gfo:GFO_1811 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_004431546.1 PFAM: Domain of unknown function DUF2520; KEGG: cat:CA2559_09808 hypothetical protein YP_004431547.1 PFAM: cytochrome c assembly protein; KEGG: cat:CA2559_09813 hypothetical protein YP_004431548.1 KEGG: chu:CHU_2800 sensor kinase of Zn/Pb responsive two-component regulatory system YP_004431549.1 KEGG: cat:CA2559_09838 FumC; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_004431550.1 KEGG: rbi:RB2501_15619 fumarate hydratase YP_004431551.1 KEGG: dfe:Dfer_3164 monosaccharide-transporting ATPase YP_004431552.1 PFAM: peptidase M16 domain protein; KEGG: gfo:GFO_0265 M16 family peptidase YP_004431553.1 KEGG: chu:CHU_2450 hydrolase with alpha/beta fold YP_004431554.1 KEGG: zpr:ZPR_1491 protein containing alpha/beta hydrolase fold YP_004431555.1 KEGG: cat:CA2559_09843 hypothetical protein YP_004431556.1 KEGG: gfo:GFO_1478 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_004431557.1 PFAM: BLUF domain protein; KEGG: gfo:GFO_0378 BLUF-domain-containing protein YP_004431558.1 KEGG: sli:Slin_4846 hypothetical protein YP_004431559.1 KEGG: rbi:RB2501_10352 hypothetical protein YP_004431560.1 KEGG: mlo:mlr0543 hypothetical protein YP_004431561.1 SMART: DEAD-like helicase; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; KEGG: dfe:Dfer_5242 type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit YP_004431562.1 KEGG: abu:Abu_1561 hypothetical protein YP_004431563.1 PFAM: restriction modification system DNA specificity domain; KEGG: zpr:ZPR_0880 restriction modification system DNA specificity subunit YP_004431564.1 TIGRFAM: type I restriction-modification system, M subunit; KEGG: wsu:WS1136 type I site-specific deoxyribonuclease; PFAM: N-6 DNA methylase YP_004431566.1 KEGG: rbi:RB2501_00621 hypothetical protein YP_004431567.1 PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; KEGG: fjo:Fjoh_3476 OmpA/MotB domain-containing protein YP_004431568.1 TIGRFAM: membrane protein; KEGG: zpr:ZPR_3076 hypothetical protein YP_004431569.1 KEGG: sbm:Shew185_3982 outer membrane adhesin like proteiin; TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11 YP_004431570.1 KEGG: chu:CHU_2151 hypothetical protein YP_004431571.1 KEGG: chu:CHU_2150 hypothetical protein YP_004431572.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: cat:CA2559_10213 probable NADP(H) oxidoreductase YP_004431573.1 KEGG: cat:CA2559_10218 potassium efflux system protein; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_004431574.1 KEGG: abb:ABBFA_003093 ATP-dependent DNA helicase PcrA; manually curated; PFAM: UvrD/REP helicase YP_004431575.1 KEGG: gfo:GFO_2655 exonuclease domain-containing protein; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein YP_004431577.1 PFAM: Protein of unknown function DUF2383; KEGG: cat:CA2559_07210 hypothetical protein YP_004431578.1 PFAM: BLUF domain protein; KEGG: zpr:ZPR_0925 BLUF-domain-containing protein YP_004431579.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aac:Aaci_0734 glyoxalase/bleomycin resistance protein/dioxygenase YP_004431580.1 PFAM: protein of unknown function DUF421; KEGG: gfo:GFO_1918 hypothetical protein YP_004431581.1 PFAM: UspA domain-containing protein; KEGG: rbi:RB2501_09600 universal stress protein YP_004431582.1 PFAM: protein of unknown function DUF81; KEGG: mba:Mbar_A1879 hypothetical protein YP_004431583.1 PFAM: Patatin; KEGG: coc:Coch_1079 patatin YP_004431584.1 PFAM: phosphoribosyltransferase; KEGG: zpr:ZPR_2084 uracil phosphoribosyltransferase YP_004431585.1 KEGG: fba:FIC_00590 hypothetical protein YP_004431586.1 KEGG: pmu:PM0452 hypothetical protein YP_004431587.1 KEGG: cat:CA2559_10503 site-specific recombinase, phage integrase family/ribosomal subunitinterface protein YP_004431588.1 PFAM: UspA domain-containing protein; KEGG: gfo:GFO_1417 universal stress protein family protein YP_004431589.1 KEGG: bth:BT_1144 hypothetical protein YP_004431590.1 PFAM: MscS Mechanosensitive ion channel; KEGG: rbi:RB2501_12062 hypothetical protein YP_004431591.1 KEGG: bbe:BBR47_09340 hypothetical protein YP_004431592.1 KEGG: fjo:Fjoh_2373 hypothetical protein YP_004431593.1 KEGG: fjo:Fjoh_2374 chaperone DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004431594.1 KEGG: mth:MTH306 hypothetical protein YP_004431595.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: zpr:ZPR_2014 sensory transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004431596.1 KEGG: zpr:ZPR_2015 diguanylate phosphodiesterase (EAL domain) with response regulator receiver modulation; PFAM: response regulator receiver; cyclic nucleotide-binding; regulatory protein Crp; SMART: response regulator receiver; cyclic nucleotide-binding; regulatory protein Crp YP_004431597.1 KEGG: zpr:ZPR_2016 universal stress protein YP_004431598.1 PFAM: UspA domain-containing protein; KEGG: zpr:ZPR_4316 universal stress protein UspA YP_004431599.1 PFAM: UspA domain-containing protein; KEGG: zpr:ZPR_4316 universal stress protein UspA YP_004431600.1 PFAM: UspA domain-containing protein; KEGG: rbi:RB2501_09600 universal stress protein YP_004431601.1 PFAM: UspA domain-containing protein; KEGG: rbi:RB2501_09600 universal stress protein YP_004431602.1 PFAM: UspA domain-containing protein; KEGG: gfo:GFO_0733 universal stress protein family protein YP_004431603.1 KEGG: rbi:RB2501_11902 hypothetical protein YP_004431604.1 KEGG: gfo:GFO_0724 hypothetical protein YP_004431605.1 KEGG: hmg:100197434 similar to cut-like homeobox 1 YP_004431606.1 KEGG: rbi:RB2501_11912 cardiolipin synthetase YP_004431607.1 KEGG: gfo:GFO_1418 membrane protein YP_004431608.1 KEGG: coc:Coch_0768 CBS domain containing membrane protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004431609.1 KEGG: gfo:GFO_1431 heavy metal-transporting P-type ATPase-most likely copper-transporting; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004431610.1 KEGG: bta:100336215 hypothetical protein LOC100336215 YP_004431611.1 KEGG: gfo:GFO_1432 cbb3-type cytochrome oxidase maturation protein; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type YP_004431612.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit II; KEGG: zpr:ZPR_2301 probable cytochrome oxidase subunit (cbb3-type); PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c oxidase subunit I YP_004431613.1 KEGG: zpr:ZPR_2302 hypothetical protein YP_004431614.1 PFAM: cytochrome c class I; KEGG: gfo:GFO_1435 cbb3-type cytochrome c oxidase subunit III YP_004431615.1 KEGG: fba:FIC_00091 hypothetical protein YP_004431616.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: zpr:ZPR_2304 probable iron-sulfur protein YP_004431618.1 PFAM: FixH family protein; KEGG: zpr:ZPR_2305 hypothetical protein YP_004431619.1 KEGG: gfo:GFO_1438 hypothetical protein YP_004431620.1 KEGG: fps:FP0767 hypothetical protein YP_004431621.1 KEGG: aoe:Clos_0254 sporulation protein YtaF YP_004431622.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: gfo:GFO_1414 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein YP_004431623.1 KEGG: zpr:ZPR_3571 response regulator receiver domain protein (CheY); PFAM: response regulator receiver; SMART: response regulator receiver YP_004431624.1 PFAM: Heme NO binding domain protein; KEGG: cat:CA2559_11538 guanylate cyclase-related protein YP_004431625.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: zpr:ZPR_3573 sensory transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_004431626.1 PFAM: domain of unknown function DUF1745; FIST C domain; KEGG: fps:FP1018 hypothetical protein YP_004431627.1 KEGG: zpr:ZPR_3575 histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004431628.1 KEGG: zpr:ZPR_3576 hypothetical protein YP_004431629.1 KEGG: cat:CA2559_11553 two-component system response regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_004431630.1 KEGG: zpr:ZPR_1054 hypothetical protein YP_004431631.1 KEGG: ant:Arnit_2113 hypothetical protein YP_004431632.1 KEGG: bsu:BSU36010 acetolactate synthase YP_004431633.1 KEGG: zpr:ZPR_1051 TPR repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004431634.1 KEGG: msu:MS1954 hypothetical protein YP_004431636.1 KEGG: zpr:ZPR_1050 polysaccharide transporter YP_004431637.1 KEGG: acl:ACL_0808 polyribonucleotide nucleotidyltransferase (PNPase) YP_004431638.1 PFAM: glycosyl transferase group 1; KEGG: zpr:ZPR_1049 glycosyltransferase YP_004431639.1 PFAM: glycoside hydrolase family 5; KEGG: zpr:ZPR_1048 glycosidase YP_004431640.1 KEGG: zpr:ZPR_1047 hypothetical protein YP_004431641.1 KEGG: zpr:ZPR_1046 integral membrane protein YP_004431642.1 PFAM: glycosyl transferase family 2; KEGG: zpr:ZPR_1045 glycosyl transferase, family 2 YP_004431643.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: gfo:GFO_1692 phosphomannose isomerase type I; PFAM: mannose-6-phosphate isomerase type I YP_004431644.1 KEGG: hch:HCH_05762 hypothetical protein YP_004431645.1 KEGG: amr:AM1_C0015 hypothetical protein YP_004431646.1 KEGG: dat:HRM2_01140 calcium-binding EF hand domain protein YP_004431647.1 PFAM: electron transport protein SCO1/SenC; KEGG: sli:Slin_5146 electron transport protein SCO1/SenC YP_004431648.1 PFAM: MORN variant repeat-containing protein; KEGG: sli:Slin_6134 hypothetical protein YP_004431649.1 KEGG: lic:LIC10561 hypothetical protein YP_004431650.1 PFAM: histidine kinase internal region; KEGG: cpi:Cpin_1843 signal transduction histidine kinase, LytS YP_004431651.1 KEGG: sli:Slin_5133 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_004431652.1 TIGRFAM: PfaD family protein; KEGG: spl:Spea_2910 PfaD family protein YP_004431653.1 KEGG: mar:MAE_27870 short-chain dehydrogenase/reductase; TIGRFAM: PfaB family protein; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-ketoacyl synthase YP_004431654.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: naz:Aazo_4448 polyketide-type polyunsaturated fatty acid synthase PfaA YP_004431655.1 TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; KEGG: cps:CPS_3104 polyunsaturated fatty acid synthase PfaA; PFAM: Beta-ketoacyl synthase ; Acyl transferase; phosphopantetheine-binding YP_004431656.1 PFAM: regulatory protein TetR; KEGG: sli:Slin_5507 transcriptional regulator, TetR family YP_004431657.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: fjo:Fjoh_2086 4'-phosphopantetheinyl transferase YP_004431660.1 KEGG: gfo:GFO_2621 response regulator receiver domain-containing protein YP_004431661.1 KEGG: fjo:Fjoh_2974 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004431662.1 PFAM: TonB-dependent receptor plug; KEGG: rbi:RB2501_10050 hypothetical protein YP_004431663.1 PFAM: FecR protein; KEGG: rbi:RB2501_10055 transmembrane sensor YP_004431664.1 KEGG: fjo:Fjoh_0160 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004431665.1 manually curated; KEGG: zpr:ZPR_3712 hypothetical protein YP_004431666.1 TIGRFAM: fumarylacetoacetase; KEGG: cat:CA2559_09238 fumarylacetoacetase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase YP_004431667.1 KEGG: zpr:ZPR_1219 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004431668.1 KEGG: zpr:ZPR_3130 membrane protein YP_004431669.1 KEGG: cat:CA2559_07030 hypothetical protein YP_004431670.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: cat:CA2559_08486 cationic outer membrane protein OmpH YP_004431671.1 KEGG: cat:CA2559_08481 hypothetical protein YP_004431672.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cat:CA2559_00965 peptidyl-prolyl cis-trans isomerase YP_004431673.1 KEGG: gfo:GFO_2507 hypothetical protein YP_004431674.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: cat:CA2559_00955 exported peptidyl-prolyl cis-trans isomerase YP_004431675.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: cat:CA2559_00950 methanol dehydrogenase regulator-like protein YP_004431676.1 KEGG: cat:CA2559_00945 aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain-containing protein YP_004431677.1 KEGG: cat:CA2559_09323 glyoxalase family protein; TIGRFAM: lactoylglutathione lyase family protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004431678.1 PFAM: helix-turn-helix HxlR type; KEGG: cat:CA2559_09328 hypothetical protein YP_004431679.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-3 domain protein; response regulator receiver; KEGG: cph:Cpha266_2350 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver YP_004431680.1 KEGG: fjo:Fjoh_0179 hypothetical protein YP_004431681.1 KEGG: bja:bll2757 transcriptional regulator FixK YP_004431682.1 KEGG: cat:CA2559_11443 ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004431683.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: fba:FIC_00631 tetratricopeptide repeat family protein YP_004431684.1 KEGG: lbf:LBF_2189 hypothetical protein YP_004431685.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: cat:CA2559_10003 glutamate synthase YP_004431686.1 manually curated; KEGG: zpr:ZPR_1682 amino acid permease YP_004431687.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cat:CA2559_12678 secreted enzyme YP_004431688.1 PFAM: amidohydrolase; KEGG: cat:CA2559_12683 predicted amidohydrolase YP_004431689.1 KEGG: fjo:Fjoh_2574 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_004431690.1 TIGRFAM: aspartate kinase; KEGG: fjo:Fjoh_2575 bifunctional aspartokinase I/homeserine dehydrogenase I; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding YP_004431691.1 KEGG: cat:CA2559_11168 YjeF-related sugar kinase; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain-containing protein; protein of unknown function UPF0031 YP_004431692.1 KEGG: cat:CA2559_08646 hypothetical protein YP_004431693.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cat:CA2559_08651 hypothetical protein YP_004431694.1 KEGG: cat:CA2559_08656 hypothetical protein YP_004431695.1 KEGG: cat:CA2559_08661 hypothetical protein YP_004431696.1 KEGG: cat:CA2559_08666 hypothetical protein YP_004431697.1 KEGG: rbi:RB2501_15349 hypothetical protein YP_004431698.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: fjo:Fjoh_2461 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004431699.1 KEGG: cat:CA2559_08691 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_004431700.1 PFAM: acyl-CoA reductase; KEGG: fjo:Fjoh_2463 hypothetical protein YP_004431701.1 KEGG: cat:CA2559_08701 4Fe-4S ferredoxin, iron-sulfur binding-protein YP_004431702.1 PFAM: sulphate transporter; KEGG: chu:CHU_3570 sulfate transporter YP_004431703.1 PFAM: UspA domain-containing protein; KEGG: htu:Htur_3089 UspA domain protein YP_004431704.1 KEGG: aba:Acid345_0010 hypothetical protein YP_004431705.1 KEGG: cat:CA2559_09213 probable arsenate reductase (glutaredoxin); TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related YP_004431706.1 KEGG: cpi:Cpin_2236 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004431707.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: rrs:RoseRS_1495 ThiJ/PfpI domain-containing protein YP_004431708.1 PFAM: major facilitator superfamily MFS_1; KEGG: cat:CA2559_06960 major facilitator family transporter YP_004431709.1 KEGG: mmw:Mmwyl1_0983 hypothetical protein YP_004431710.1 KEGG: cat:CA2559_12943 secreted protein containing N-terminal zinc-dependentcarboxypeptidase related domain; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A YP_004431711.1 PFAM: ROK family protein; KEGG: rbi:RB2501_10397 ROK family protein YP_004431712.1 PFAM: protein of unknown function UPF0118; KEGG: gfo:GFO_2793 membrane protein, UPF0118 YP_004431713.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cat:CA2559_13253 glyoxalase/bleomycin resistance protein/dioxygenase YP_004431714.1 KEGG: zpr:ZPR_3803 hypothetical protein YP_004431715.1 KEGG: zpr:ZPR_2000 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_004431716.1 KEGG: zpr:ZPR_2001 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like YP_004431717.1 PFAM: peptidase S41; KEGG: cat:CA2559_10453 hypothetical protein YP_004431718.1 PFAM: LytTr DNA-binding region; KEGG: fjo:Fjoh_0682 response regulator receiver protein YP_004431719.1 PFAM: Domain of unknown function DUF1853; KEGG: cat:CA2559_12003 hypothetical protein YP_004431720.1 KEGG: cat:CA2559_10613 hypothetical protein YP_004431721.1 PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; KEGG: cat:CA2559_10623 tRNA pseudouridine synthase A YP_004431722.1 KEGG: cat:CA2559_10413 proteinase; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein YP_004431723.1 PFAM: Conserved hypothetical protein CHP02453; KEGG: rbi:RB2501_15069 hypothetical protein YP_004431724.1 KEGG: zpr:ZPR_2601 hypothetical protein YP_004431725.1 PFAM: OmpA/MotB domain protein; KEGG: cat:CA2559_08396 OmpA/MotB YP_004431726.1 PFAM: nitroreductase; KEGG: cat:CA2559_10883 nitroreductase YP_004431727.1 KEGG: cat:CA2559_10508 hypothetical protein YP_004431728.1 KEGG: rbi:RB2501_14749 hypothetical protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004431729.1 PFAM: MscS Mechanosensitive ion channel; KEGG: gfo:GFO_1517 small-conductance mechanosensitive ion channel protein YP_004431730.1 PFAM: Aldehyde Dehydrogenase; KEGG: gfo:GFO_1513 NADP-dependent aldehyde dehydrogenase YP_004431731.1 PFAM: protein of unknown function DUF72; KEGG: zpr:ZPR_2603 hypothetical protein YP_004431732.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: pat:Patl_3644 carbohydrate kinase; PFAM: shikimate kinase YP_004431733.1 KEGG: zpr:ZPR_2583 low-affinity gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_004431734.1 KEGG: cat:CA2559_06215 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase domain-containing protein; fumarate lyase YP_004431735.1 PFAM: protein of unknown function DUF58; KEGG: cat:CA2559_09793 hypothetical protein YP_004431736.1 KEGG: gfo:GFO_1000 MoxR-like AAA family ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase YP_004431737.1 KEGG: cat:CA2559_09268 hypothetical protein YP_004431738.1 KEGG: zpr:ZPR_2416 secreted protein YP_004431739.1 KEGG: cat:CA2559_09278 hypothetical protein YP_004431740.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: cat:CA2559_09283 hypothetical protein YP_004431741.1 PFAM: RDD domain containing protein; KEGG: zpr:ZPR_2419 RDD family protein YP_004431742.1 PFAM: Uncharacterised protein family UPF0126; KEGG: cat:CA2559_09293 membrane protein YP_004431743.1 KEGG: cat:CA2559_07570 hypothetical protein YP_004431744.1 PFAM: Na+/solute symporter; KEGG: cat:CA2559_07575 transmembrane sodium-solute transporter YP_004431745.1 PFAM: protein of unknown function DUF214; KEGG: cat:CA2559_10373 ABC transporter efflux protein YP_004431746.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: fjo:Fjoh_5052 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_004431747.1 PFAM: Protein of unknown function, membrane YfhO; KEGG: cat:CA2559_08841 hypothetical protein YP_004431748.1 PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_2425 glycosyl transferase, group 1 YP_004431749.1 PFAM: polysaccharide biosynthesis protein; KEGG: cat:CA2559_08851 hypothetical protein YP_004431750.1 KEGG: fps:FP1108 hypothetical protein YP_004431751.1 PFAM: TonB-dependent receptor plug; KEGG: zpr:ZPR_2072 hypothetical protein YP_004431752.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: gfo:GFO_1625 hypothetical protein YP_004431753.1 KEGG: gfo:GFO_1624 MutS family DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_004431754.1 KEGG: cat:CA2559_10973 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily YP_004431755.1 KEGG: cat:CA2559_10968 uracil-DNA glycosylase YP_004431756.1 TIGRFAM: Polyphosphate kinase; KEGG: cat:CA2559_10963 polyphosphate kinase; PFAM: Polyphosphate kinase YP_004431757.1 PFAM: purine or other phosphorylase family 1; KEGG: zpr:ZPR_2700 purine nucleoside phosphorylase II YP_004431758.1 KEGG: zpr:ZPR_2699 hypothetical protein YP_004431759.1 PFAM: translation initiation factor SUI1; KEGG: fjo:Fjoh_2838 translation initiation factor SUI1 YP_004431760.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: cat:CA2559_10948 oxidoreductase YP_004431761.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gfo:GFO_1930 hypothetical protein YP_004431762.1 PFAM: amine oxidase; KEGG: sli:Slin_2753 amine oxidase YP_004431763.1 KEGG: ant:Arnit_2010 polypeptide chain release factor methylase YP_004431764.1 PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain-containing protein; KEGG: cat:CA2559_10943 oxidoreductase YP_004431765.1 PFAM: protein of unknown function DUF1328; KEGG: cat:CA2559_10933 hypothetical protein YP_004431766.1 KEGG: cat:CA2559_10928 hypothetical protein YP_004431767.1 PFAM: OmpA/MotB domain protein; KEGG: cat:CA2559_10923 OmpA family protein YP_004431768.1 PFAM: FAD dependent oxidoreductase; KEGG: fjo:Fjoh_3806 FAD dependent oxidoreductase YP_004431769.1 PFAM: Methyltransferase type 12; KEGG: cat:CA2559_10913 hypothetical protein YP_004431770.1 PFAM: chalcone and stilbene synthase domain protein; KEGG: cpi:Cpin_5033 chalcone and stilbene synthase domain protein YP_004431771.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cpi:Cpin_5032 short-chain dehydrogenase/reductase SDR YP_004431772.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: cat:CA2559_10898 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase YP_004431773.1 PFAM: Beta-ketoacyl synthase; KEGG: gfo:GFO_1607 3-oxoacyl-[acyl-carrier-protein] synthase YP_004431774.1 KEGG: cat:CA2559_10888 acyl carrier protein YP_004431775.1 KEGG: rbi:RB2501_04350 hypothetical protein YP_004431776.1 KEGG: cat:CA2559_09718 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_004431777.1 PFAM: DNA gyrase/topoisomerase IV subunit A; KEGG: rbi:RB2501_15309 DNA topoisomerase IV subunit A; SMART: DNA gyrase/topoisomerase IV subunit A YP_004431778.1 KEGG: rbi:RB2501_11417 fibronectin, type III YP_004431779.1 KEGG: cat:CA2559_00775 iron-regulated protein FrpC YP_004431780.1 KEGG: gfo:GFO_1780 membrane protein YP_004431781.1 KEGG: zpr:ZPR_2360 hypothetical protein YP_004431782.1 PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: fjo:Fjoh_2907 hypothetical protein YP_004431784.1 KEGG: fjo:Fjoh_3553 TPR repeat-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004431785.1 KEGG: fjo:Fjoh_3553 TPR repeat-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004431786.1 KEGG: cat:CA2559_08151 response regulator; PFAM: response regulator receiver; PglZ domain protein; SMART: response regulator receiver YP_004431787.1 KEGG: cat:CA2559_08156 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004431788.1 KEGG: cat:CA2559_08161 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_004431789.1 KEGG: rbi:RB2501_15199 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004431790.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: zpr:ZPR_2366 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_004431791.1 KEGG: gfo:GFO_1773 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein YP_004431792.1 KEGG: fjo:Fjoh_2900 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_004431793.1 KEGG: cat:CA2559_08191 hypothetical protein YP_004431794.1 KEGG: zpr:ZPR_2376 succinyl-CoA ligase subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_004431795.1 KEGG: zpr:ZPR_2378 3-oxoacyl-[acyl-carrier protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004431796.1 KEGG: cat:CA2559_08231 hypothetical protein YP_004431797.1 KEGG: cat:CA2559_08236 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein YP_004431798.1 KEGG: gfo:GFO_1583 hypothetical protein YP_004431799.1 KEGG: cat:CA2559_09026 hypothetical protein YP_004431800.1 PFAM: OmpA/MotB domain protein; KEGG: cat:CA2559_09021 outer membrane protein YP_004431801.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: zpr:ZPR_2381 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain YP_004431802.1 TIGRFAM: histidinol dehydrogenase; KEGG: fjo:Fjoh_2877 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004431803.1 KEGG: cat:CA2559_09006 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004431804.1 TIGRFAM: histidinol-phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: cat:CA2559_08996 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: imidazoleglycerol-phosphate dehydratase YP_004431805.1 KEGG: fjo:Fjoh_2874 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_004431806.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: gfo:GFO_1759 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein YP_004431807.1 KEGG: rbi:RB2501_15129 hypothetical protein YP_004431808.1 KEGG: rbi:RB2501_10120 hydrolase YP_004431809.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: fba:FIC_00886 hypothetical protein YP_004431810.1 KEGG: cat:CA2559_06785 hypothetical protein YP_004431811.1 KEGG: cat:CA2559_06795 hypothetical protein; PFAM: protein of unknown function DUF853 NPT hydrolase; SMART: AAA ATPase YP_004431812.1 KEGG: pha:PSHAa2410 endoribonuclease with L-PSP domain; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_004431813.1 KEGG: tet:TTHERM_01312320 hypothetical protein YP_004431814.1 SMART: PUR-alpha/beta/gamma DNA/RNA-binding; KEGG: cat:CA2559_12938 hypothetical protein YP_004431815.1 KEGG: cat:CA2559_12933 ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004431816.1 PFAM: NusB/RsmB/TIM44; KEGG: gfo:GFO_2527 antitermination protein NusB YP_004431817.1 PFAM: protein of unknown function DUF1573; KEGG: zpr:ZPR_0857 secreted protein containing DUF1573 YP_004431818.1 KEGG: coc:Coch_1965 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_004431819.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: zpr:ZPR_2436 Cu/Zn superoxide dismutase YP_004431820.1 PFAM: OsmC family protein; KEGG: cat:CA2559_12698 hypothetical protein YP_004431821.1 PFAM: Protein of unknown function DUF2490; KEGG: rbi:RB2501_00581 hypothetical protein YP_004431822.1 KEGG: cat:CA2559_12688 hypothetical protein YP_004431823.1 KEGG: eli:ELI_09695 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin YP_004431824.1 KEGG: fjo:Fjoh_4337 von Willebrand factor type A (vWA)domain-containing protein YP_004431825.1 KEGG: zpr:ZPR_2266 magnesium chelatase subunit Chll YP_004431826.1 KEGG: rbi:RB2501_12754 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004431827.1 KEGG: cat:CA2559_06025 lipoprotein YP_004431828.1 KEGG: cat:CA2559_06020 hypothetical protein YP_004431829.1 KEGG: rbi:RB2501_00166 adenylosuccinate lyase YP_004431830.1 PFAM: Silent information regulator protein Sir2; KEGG: zpr:ZPR_2106 NAD-dependent histone deacetylase YP_004431831.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cat:CA2559_11883 SpoU protein (SpoU) YP_004431832.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: pat:Patl_0274 redoxin YP_004431833.1 KEGG: ant:Arnit_2307 ribonuclease BN YP_004431834.1 KEGG: cat:CA2559_08806 hypothetical protein YP_004431835.1 KEGG: cat:CA2559_08811 ATP-dependent RNA helicase, DEAD/DEAH box family protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004431836.1 KEGG: zpr:ZPR_2112 HAM1 protein; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_004431837.1 KEGG: cat:CA2559_11963 hypothetical protein YP_004431838.1 PFAM: protein of unknown function DUF163; KEGG: fjo:Fjoh_3495 rRNA large subunit methyltransferase YP_004431839.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: cat:CA2559_08421 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_004431840.1 KEGG: cat:CA2559_08426 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004431841.1 KEGG: cat:CA2559_08431 hypothetical protein YP_004431842.1 PFAM: Protein of unknown function DUF2147; KEGG: cat:CA2559_09958 hypothetical protein YP_004431843.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: zpr:ZPR_2118 primosomal protein N' (replication factor Y); SMART: DEAD-like helicase ; helicase domain protein YP_004431844.1 KEGG: gfo:GFO_1107 two-component response transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_004431845.1 KEGG: rbi:RB2501_00066 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_004431846.1 KEGG: fjo:Fjoh_3481 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_004431847.1 KEGG: zpr:ZPR_2122 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_004431848.1 KEGG: zpr:ZPR_2123 hypothetical protein YP_004431849.1 KEGG: gfo:GFO_2658 ATP-independent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004431850.1 PFAM: TonB-dependent receptor plug; KEGG: gfo:GFO_0462 hypothetical protein YP_004431851.1 KEGG: gfo:GFO_0742 hemolysin-3 family protein; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_004431852.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: phe:Phep_1491 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004431853.1 KEGG: pbe:PB001362.02.0 hypothetical protein YP_004431854.1 PFAM: plasmid stabilization system; KEGG: cch:Cag_1051 hypothetical protein YP_004431855.1 KEGG: gfo:GFO_1133 hypothetical protein YP_004431856.1 PFAM: OmpA/MotB domain protein; KEGG: fps:FP0684 OmpA family outer membrane protein YP_004431857.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: zpr:ZPR_1215 chaperone ClpB; SMART: AAA ATPase YP_004431858.1 KEGG: gfo:GFO_2264 hypothetical protein YP_004431859.1 manually curated; KEGG: gfo:GFO_0465 hypothetical protein YP_004431860.1 KEGG: rbi:RB2501_15889 hypothetical protein YP_004431864.1 KEGG: cat:CA2559_10088 hypothetical protein YP_004431865.1 KEGG: gfo:GFO_0151 hypothetical protein YP_004431866.1 KEGG: zpr:ZPR_2654 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004431867.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; KEGG: mev:Metev_1156 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_004431868.1 KEGG: cat:CA2559_10153 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004431869.1 KEGG: fjo:Fjoh_2850 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004431870.1 PFAM: phospholipase A1; KEGG: gfo:GFO_0043 phospholipase A1 YP_004431871.1 KEGG: fba:FIC_01610 secreted protein YP_004431872.1 KEGG: sli:Slin_1278 neprilysin; PFAM: peptidase M13; Peptidase M13, neprilysin-like YP_004431873.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: zpr:ZPR_2619 short-chain dehydrogenase/reductase family protein YP_004431874.1 PFAM: lipolytic protein G-D-S-L family; KEGG: gfo:GFO_1948 GDSL-like lipase/acylhydrolase YP_004431875.1 KEGG: gfo:GFO_1949 ABC-type transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004431876.1 PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_1950 FtsX family membrane protein YP_004431877.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: cat:CA2559_10123 ThiJ/PfpI YP_004431878.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cpi:Cpin_1126 iron-containing alcohol dehydrogenase YP_004431879.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: cat:CA2559_11258 YfmJ YP_004431880.1 PFAM: nitroreductase; KEGG: cat:CA2559_10128 nitroreductase family protein YP_004431881.1 PFAM: regulatory protein TetR; KEGG: fps:FP0992 TetR family transcriptional regulator YP_004431882.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bth:BT_4238 permease YP_004431883.1 KEGG: cat:CA2559_10158 short-chain dehydrogenase YP_004431884.1 KEGG: zpr:ZPR_2654 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004431885.1 PFAM: thiamine monophosphate synthase; KEGG: zpr:ZPR_0139 thiamine-phosphate pyrophosphorylase YP_004431886.1 KEGG: fjo:Fjoh_1872 hypothetical protein YP_004431887.1 KEGG: rbi:RB2501_10307 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin YP_004431888.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: cat:CA2559_10113 Na+/H+ antiporter YP_004431889.1 KEGG: api:100160896 similar to predicted protein YP_004431890.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: cat:CA2559_12583 peptidyl-prolyl cis-trans isomerase, FKBP-type YP_004431891.1 KEGG: rbi:RB2501_14779 hypothetical protein YP_004431892.1 KEGG: chu:CHU_0245 thiamine biosynthesis protein (HesA/MoeB/ThiF family protein); PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SMART: Rhodanese domain protein YP_004431893.1 KEGG: zpr:ZPR_0141 thiamine biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_004431894.1 PFAM: thiazole biosynthesis family protein; KEGG: zpr:ZPR_0140 thiazole synthase YP_004431895.1 PFAM: thiamine monophosphate synthase; KEGG: zpr:ZPR_0139 thiamine-phosphate pyrophosphorylase YP_004431896.1 KEGG: fjo:Fjoh_1601 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_004431897.1 PFAM: thiamine monophosphate synthase; KEGG: zpr:ZPR_0138 thiamine phosphate pyrophosphorylase YP_004431898.1 KEGG: zpr:ZPR_0137 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_004431899.1 KEGG: zpr:ZPR_0136 thiamine biosynthesis protein; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_004431900.1 KEGG: cpi:Cpin_4076 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein YP_004431901.1 KEGG: gfo:GFO_2345 two-component system sensor histidine kinase/response regulator hybrid; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide repeat YP_004431902.1 KEGG: hvo:HVO_2276 hypothetical protein YP_004431903.1 KEGG: pfh:PFHG_05322 conserved hypothetical protein YP_004431904.1 KEGG: rbi:RB2501_14784 hypothetical protein YP_004431905.1 KEGG: cat:CA2559_10233 hypothetical protein YP_004431906.1 PFAM: major facilitator superfamily MFS_1; KEGG: cat:CA2559_10238 bicyclomycin resistance protein YP_004431907.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gfo:GFO_1600 cytidine/deoxycytidylate deaminase family protein YP_004431908.1 PFAM: Aldehyde Dehydrogenase; KEGG: cat:CA2559_10478 NAD-dependent aldehyde dehydrogenase YP_004431910.1 KEGG: rbi:RB2501_15509 hypothetical protein YP_004431911.1 PFAM: SCP-like extracellular; KEGG: gfo:GFO_1840 SCP-like extracellular protein YP_004431912.1 KEGG: cat:CA2559_11333 dipeptidase; PFAM: peptidase M19 renal dipeptidase YP_004431913.1 KEGG: zpr:ZPR_2077 helicase-like protein; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004431914.1 KEGG: zpr:ZPR_2623 hypothetical protein YP_004431915.1 KEGG: zpr:ZPR_2615 hypothetical protein YP_004431916.1 KEGG: fjo:Fjoh_2455 hypothetical protein YP_004431917.1 TIGRFAM: GTP cyclohydrolase I; KEGG: cat:CA2559_08636 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004431918.1 KEGG: cat:CA2559_08626 membrane associated hydrolase YP_004431919.1 KEGG: cat:CA2559_08621 lipoprotein releasing system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004431920.1 PFAM: Conserved hypothetical protein CHP02757; KEGG: fps:FP0631 hypothetical protein YP_004431921.1 KEGG: cat:CA2559_08061 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein YP_004431922.1 TIGRFAM: conserved hypothetical protein; KEGG: cat:CA2559_08051 inter-alpha-trypsin inhibitor heavy chain H2-like protein, precursor YP_004431923.1 PFAM: amidohydrolase; KEGG: zpr:ZPR_2541 dihydroorotase YP_004431924.1 KEGG: fjo:Fjoh_2448 hypothetical protein YP_004431925.1 PFAM: phospholipase/Carboxylesterase; KEGG: gfo:GFO_1452 phospholipase/carboxylesterase family protein YP_004431926.1 KEGG: cat:CA2559_09573 hydrolase YP_004431927.1 KEGG: fjo:Fjoh_2442 beta-lactamase domain-containing protein YP_004431928.1 KEGG: zpr:ZPR_2533 hypothetical protein YP_004431929.1 KEGG: gfo:GFO_0612 hypothetical protein YP_004431930.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cat:CA2559_12323 bacterioferritin comigratory protein, thiol peroxidase YP_004431931.1 PFAM: HhH-GPD family protein; KEGG: cat:CA2559_09263 endonuclease III/Nth; SMART: HhH-GPD family protein YP_004431932.1 KEGG: gfo:GFO_1785 hypothetical protein YP_004431933.1 KEGG: gfo:GFO_1786 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004431934.1 KEGG: gfo:GFO_1787 UvrABC system protein A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_004431935.1 KEGG: dol:Dole_0765 hypothetical protein YP_004431936.1 KEGG: rbi:RB2501_00446 hypothetical protein YP_004431937.1 KEGG: ttu:TERTU_1900 carbohydrate binding module family 9 domain protein YP_004431938.1 PFAM: peptidase M28; KEGG: cat:CA2559_10643 probable aminopeptidase fused to fibronectin type 3 domain YP_004431939.1 TIGRFAM: amidohydrolase; KEGG: zpr:ZPR_1210 hydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004431940.1 KEGG: cat:CA2559_07600 x-prolyl-dipeptidyl aminopeptidase; PFAM: X-Pro dipeptidyl-peptidase domain protein YP_004431941.1 TIGRFAM: amidohydrolase; KEGG: rbi:RB2501_14489 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004431942.1 PFAM: Penicillinase repressor; KEGG: fps:FP1749 transcriptional regulator YP_004431943.1 PFAM: peptidase M56 BlaR1; KEGG: cat:CA2559_07465 hypothetical protein YP_004431944.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cat:CA2559_10038 transporter YP_004431945.1 PFAM: cyclic nucleotide-binding; KEGG: cat:CA2559_10168 hypothetical protein YP_004431946.1 PFAM: fatty acid desaturase; KEGG: cat:CA2559_10163 fatty acid desaturase YP_004431947.1 PFAM: Methionine sulfoxide reductase A; KEGG: gfo:GFO_1585 peptide methionine sulfoxide reductase YP_004431948.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: zpr:ZPR_1178 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase YP_004431949.1 PFAM: amine oxidase; KEGG: srm:SRM_00900 oxidoreductase, FAD-binding YP_004431950.1 PFAM: surface antigen (D15); KEGG: cat:CA2559_03805 hypothetical protein YP_004431951.1 PFAM: protein of unknown function DUF490; KEGG: cat:CA2559_03800 hypothetical protein YP_004431952.1 KEGG: gfo:GFO_2699 fasciclin domain-containing protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin YP_004431953.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: cat:CA2559_10033 zinc-containing alcohol dehydrogenase superfamily protein YP_004431954.1 PFAM: ribonuclease BN; KEGG: chu:CHU_3548 ribonuclease YP_004431955.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cpb:Cphamn1_2082 NADH:flavin oxidoreductase/NADH oxidase YP_004431956.1 KEGG: ptm:GSPATT00012634001 hypothetical protein; PFAM: EF-Hand, Calmodulin; SMART: Calcium-binding EF-hand-containing protein YP_004431957.1 SMART: Exonuclease; Excinuclease ABC C subunit domain protein; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: gfo:GFO_2655 exonuclease domain-containing protein; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein YP_004431958.1 KEGG: eli:ELI_07935 hypothetical protein YP_004431959.1 KEGG: gfo:GFO_2659 SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890 YP_004431960.1 PFAM: pseudouridine synthase; KEGG: gfo:GFO_1954 pseudouridylate synthase YP_004431961.1 KEGG: gfo:GFO_1575 cold shock-like protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004431962.1 KEGG: cpi:Cpin_5052 hypothetical protein YP_004431963.1 KEGG: caa:Caka_2736 hypothetical protein YP_004431964.1 KEGG: rbi:RB2501_06105 hypothetical protein YP_004431965.1 PFAM: Protein of unknown function DUF2237; KEGG: cyc:PCC7424_0685 hypothetical protein YP_004431966.1 KEGG: chu:CHU_3530 ABC transporter, ATP-binding/permease; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004431967.1 PFAM: Stress responsive alpha-beta barrel domain-containing protein; KEGG: caa:Caka_0035 stress responsive alpha-beta barrel domain protein YP_004431968.1 KEGG: cat:CA2559_11323 sigma factor A; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_004431969.1 KEGG: cat:CA2559_10288 hypothetical protein YP_004431970.1 KEGG: cat:CA2559_10293 hypothetical protein YP_004431971.1 KEGG: gfo:GFO_1053 BNR repeat-containing glycosyl hydrolase YP_004431972.1 PFAM: Fmu (Sun) domain protein; KEGG: cat:CA2559_10303 sun protein YP_004431973.1 KEGG: gfo:GFO_3535 hypothetical protein YP_004431974.1 KEGG: fps:FP0695 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004431975.1 KEGG: bba:Bd3234 carboxypeptidase T precursor; PFAM: peptidase M14 carboxypeptidase A; peptidase M6 immune inhibitor A; SMART: peptidase M14 carboxypeptidase A YP_004431976.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cat:CA2559_06190 probable long chain fatty-acid CoA ligase YP_004431977.1 KEGG: chl:Chy400_1539 isoprenylcysteine carboxyl methyltransferase YP_004431978.1 KEGG: gfo:GFO_2065 UvrABC system protein A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_004431979.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: cat:CA2559_10023 hypothetical protein YP_004431980.1 manually curated; KEGG: gfo:GFO_2067 hypothetical protein YP_004431981.1 PFAM: Transketolase domain-containing protein; Transketolase central region; dehydrogenase E1 component; KEGG: cat:CA2559_10513 (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion YP_004431982.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; KEGG: cat:CA2559_11848 transmembrane HD family protein; SMART: metal-dependent phosphohydrolase HD region YP_004431983.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: cat:CA2559_11853 probable acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004431984.1 PFAM: NLP/P60 protein; KEGG: cat:CA2559_11858 dipeptidyl peptidase VI YP_004431985.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: zpr:ZPR_2594 TPR repeat-containing protein YP_004431986.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: cat:CA2559_11138 DNA gyrase A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004431987.1 KEGG: cat:CA2559_11148 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase YP_004431988.1 KEGG: gfo:GFO_1501 hypothetical protein YP_004431989.1 KEGG: gfo:GFO_1501 hypothetical protein YP_004431990.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: zpr:ZPR_2616 short chain dehydrogenase YP_004431991.1 KEGG: zpr:ZPR_3086 hypothetical protein YP_004431992.1 KEGG: cat:CA2559_11958 hypothetical protein YP_004431993.1 KEGG: rbi:RB2501_13554 hypothetical protein YP_004431994.1 KEGG: fps:FP0630 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_004431995.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cyt:cce_4625 hypothetical protein YP_004431996.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sli:Slin_3318 NADH:flavin oxidoreductase/NADH oxidase YP_004431997.1 KEGG: cat:CA2559_10713 hypothetical protein YP_004431998.1 KEGG: gfo:GFO_1982 protein-tyrosine phosphatase YP_004431999.1 TIGRFAM: capsular exopolysaccharide family; KEGG: cat:CA2559_10723 EPS related membrane protein; PFAM: lipopolysaccharide biosynthesis protein YP_004432000.1 PFAM: Soluble ligand binding domain; polysaccharide export protein; KEGG: fps:FP1276 polysaccharide exporter precursor YP_004432001.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: gfo:GFO_1985 capsular polysaccharide biosynthesis protein YP_004432002.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: fps:FP1278 aminotransferase YP_004432003.1 PFAM: sugar transferase; KEGG: nis:NIS_1249 undecaprenyl-phosphate galactose phosphotransferase YP_004432004.1 TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: gfo:GFO_1987 transferase YP_004432005.1 KEGG: coc:Coch_0716 sugar transferase; PFAM: sugar transferase YP_004432006.1 PFAM: glycosyl transferase group 1; KEGG: cat:CA2559_13003 capsular polysaccharide biosynthesis glycosyl transferase YP_004432007.1 KEGG: abb:ABBFA_002319 hypothetical protein YP_004432008.1 PFAM: glycosyl transferase group 1; KEGG: bth:BT_0392 lipopolysaccharide biosynthesis RfbU-related protein YP_004432009.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; KEGG: fps:FP1285 UDP-L-FucpNAc biosynthesis protein FnlC; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_004432010.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fps:FP1286 UDP-L-FucpNAc biosynthesis protein FnlB YP_004432011.1 KEGG: fps:FP1287 sugar epimerase YP_004432012.1 KEGG: fps:FP1288 UDP-L-FucpNAc biosynthesis protein FnlA; PFAM: polysaccharide biosynthesis protein CapD; Polysaccharide biosynthesis domain protein YP_004432013.1 KEGG: eat:EAT1b_1195 hypothetical protein YP_004432014.1 KEGG: eba:ebA5878 hypothetical protein YP_004432015.1 PFAM: Nucleotidyl transferase; CBS domain containing protein; KEGG: bfr:BF1436 mannose-1-phosphate guanyltransferase YP_004432016.1 PFAM: glycosyl transferase group 1; KEGG: abi:Aboo_0249 glycosyl transferase group 1 YP_004432017.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tna:CTN_1608 GCN5-related N-acetyltransferase YP_004432018.1 PFAM: protein of unknown function DUF201; KEGG: ctc:CTC01706 carbamoyl-phosphate synthase large chain YP_004432019.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bfs:BF0734 DegT/DnrJ/EryC1/StrS aminotransferase family O-antigen related protein YP_004432020.1 KEGG: bfs:BF1558 glyocosyltransferase protein YP_004432021.1 PFAM: polysaccharide biosynthesis protein; KEGG: bfr:BF2776 flippase YP_004432022.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: vfi:VF_0140 UDP-N-acetylglucosamine 4,6-dehydratase YP_004432023.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bfs:BF1555 dNTP-hexose dehydratase-epimerase YP_004432024.1 KEGG: coc:Coch_0472 lipopolysaccharide biosynthesis protein YP_004432025.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: coc:Coch_0473 polysaccharide export protein YP_004432026.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: cat:CA2559_13173 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004432027.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gfo:GFO_0148 CapI-like UDP-glucuronic acid epimerase YP_004432028.1 KEGG: dol:Dole_2032 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase YP_004432029.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: cat:CA2559_13108 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004432030.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: mma:MM_1166 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_004432031.1 KEGG: gfo:GFO_2036 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_004432032.1 KEGG: cat:CA2559_13118 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004432033.1 KEGG: fps:FP1296 UDP-N-acetyl-D-galactosamine dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004432034.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gfo:GFO_2041 VipB-like polysaccharide biosynthesis protein YP_004432035.1 PFAM: Ferritin Dps family protein; KEGG: gfo:GFO_2047 Dps family ferritin-like DNA-binding protein YP_004432036.1 KEGG: fps:FP0840 acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004432037.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: cat:CA2559_10583 ethanolamine utilization protein-like protein; PFAM: acylneuraminate cytidylyltransferase YP_004432038.1 KEGG: cat:CA2559_10588 hypothetical protein YP_004432039.1 KEGG: gfo:GFO_1824 RecD-like exodeoxyribonuclease YP_004432040.1 KEGG: cat:CA2559_10598 hypothetical protein YP_004432041.1 KEGG: gfo:GFO_1826 hypothetical protein YP_004432042.1 PFAM: Conserved hypothetical protein CHP00095; KEGG: fps:FP0986 modification methyltransferase YP_004432043.1 KEGG: zpr:ZPR_2718 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region YP_004432044.1 PFAM: peptidase M16 domain protein; KEGG: gfo:GFO_3583 M16 family peptidase YP_004432045.1 PFAM: peptidase M16 domain protein; KEGG: rbi:RB2501_08110 probable peptidase YP_004432046.1 KEGG: gfo:GFO_1647 hypothetical protein YP_004432047.1 KEGG: dwi:Dwil_GK15911 GK15911 gene product from transcript GK15911-RA YP_004432048.1 KEGG: zpr:ZPR_2756 TrmH family tRNA/rRNA methyltransferase; manually curated; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004432049.1 PFAM: protein of unknown function UPF0118; KEGG: cat:CA2559_13163 permease YP_004432050.1 KEGG: cat:CA2559_13168 hypothetical protein YP_004432051.1 PFAM: protein of unknown function DUF1456; KEGG: cat:CA2559_00810 hypothetical protein YP_004432052.1 KEGG: cat:CA2559_08241 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004432053.1 KEGG: zpr:ZPR_3830 ribosomal large subunit pseudouridine synthase F; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004432054.1 KEGG: osa:4336010 hypothetical protein YP_004432055.1 PFAM: protein of unknown function DUF541; KEGG: cat:CA2559_13213 hypothetical protein YP_004432056.1 PFAM: Rhomboid family protein; KEGG: cat:CA2559_13218 hypothetical protein YP_004432057.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: gfo:GFO_2055 lipid A biosynthesis lauroyl acyltransferase YP_004432058.1 PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: fps:FP0860 aminotransferase YP_004432059.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase; KEGG: cat:CA2559_08836 phosphoglucomutase/phosphomannomutase family protein YP_004432060.1 PFAM: protein of unknown function DUF479; KEGG: zpr:ZPR_1734 hypothetical protein YP_004432061.1 TIGRFAM: gamma-glutamyltransferase; KEGG: cat:CA2559_08826 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase YP_004432062.1 KEGG: cat:CA2559_09313 hypothetical protein YP_004432063.1 KEGG: cat:CA2559_09318 hypothetical protein YP_004432064.1 KEGG: cat:CA2559_09333 hypothetical protein YP_004432065.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; KEGG: cat:CA2559_09338 hypothetical protein YP_004432066.1 KEGG: zpr:ZPR_2543 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004432067.1 KEGG: fjo:Fjoh_4752 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004432068.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: cat:CA2559_06180 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerasefamily protein YP_004432069.1 KEGG: fjo:Fjoh_4923 S23 ribosomal protein YP_004432070.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: cat:CA2559_06175 acetyl-CoA acyltransferase; PFAM: Thiolase-like YP_004432071.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: rbi:RB2501_00426 acyl-CoA dehydrogenase YP_004432072.1 KEGG: gfo:GFO_2678 pyruvate carboxylase; TIGRFAM: pyruvate carboxylase; PFAM: Conserved carboxylase region; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein YP_004432073.1 KEGG: pin:Ping_2683 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004432074.1 PFAM: NUDIX hydrolase; KEGG: pin:Ping_2684 CTP pyrophosphohydrolase YP_004432075.1 PFAM: major facilitator superfamily MFS_1; KEGG: cat:CA2559_07155 hypothetical protein YP_004432076.1 PFAM: dihydrouridine synthase DuS; KEGG: dat:HRM2_08880 Dhs1 YP_004432077.1 KEGG: ere:EUBREC_0490 glycosidase YP_004432078.1 PFAM: peptidase M28; KEGG: gfo:GFO_3448 M28 family peptidase YP_004432079.1 KEGG: fjo:Fjoh_4137 carboxymethylenebutenolidase YP_004432080.1 KEGG: bxe:Bxe_B1198 hypothetical protein YP_004432081.1 KEGG: fps:FP1407 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004432082.1 KEGG: cat:CA2559_08456 hydroxymethylglutaryl-CoA lyase-like protein; PFAM: pyruvate carboxyltransferase YP_004432083.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: gfo:GFO_3080 FAD-dependent oxidoreductase YP_004432084.1 KEGG: cat:CA2559_08131 hypothetical protein YP_004432085.1 KEGG: gfo:GFO_1792 hypothetical protein YP_004432086.1 KEGG: rbi:RB2501_15539 hypothetical protein YP_004432087.1 KEGG: caa:Caka_0930 hypothetical protein YP_004432088.1 KEGG: rbi:RB2501_13244 hypothetical protein YP_004432089.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: fjo:Fjoh_4590 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004432090.1 manually curated; TIGRFAM: 6-phosphofructokinase; KEGG: fps:FP1614 6-phosphofructokinase; PFAM: phosphofructokinase YP_004432091.1 PFAM: protein of unknown function DUF490; KEGG: cat:CA2559_13133 hypothetical protein YP_004432092.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: fjo:Fjoh_4593 DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease YP_004432093.1 PFAM: protein of unknown function DUF558; KEGG: fps:FP1617 16S ribosomal RNA methyltransferase RsmE YP_004432094.1 KEGG: cat:CA2559_00335 hypothetical protein YP_004432095.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: fps:FP1646 CDP-alcohol phosphatidyltransferase class-I family protein YP_004432096.1 KEGG: cat:CA2559_11903 hypothetical protein YP_004432097.1 KEGG: cat:CA2559_11903 hypothetical protein YP_004432098.1 PFAM: Ppx/GppA phosphatase; KEGG: fps:FP0968 exopolyphosphatase YP_004432099.1 TIGRFAM: Polyphosphate kinase; KEGG: gfo:GFO_1833 polyphosphate kinase; PFAM: Polyphosphate kinase YP_004432100.1 PFAM: Phosphoglycerate mutase; KEGG: cat:CA2559_11918 phosphohistidine phosphatase, SixA YP_004432101.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: zpr:ZPR_1909 pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxine 5'-phosphate oxidase, dimerisation-like; pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_004432102.1 KEGG: cjd:JJD26997_1853 type I restriction enzyme EcoR124II R protein YP_004432103.1 KEGG: fps:FP1705 ribonuclease Z YP_004432104.1 KEGG: cat:CA2559_10318 hypothetical protein YP_004432105.1 KEGG: zpr:ZPR_1906 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004432106.1 KEGG: gfo:GFO_1844 phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004432107.1 KEGG: cpi:Cpin_2575 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004432108.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cat:CA2559_08451 hypothetical protein YP_004432109.1 KEGG: hje:HacjB3_03105 MATE efflux family protein YP_004432110.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: fba:FIC_00045 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase YP_004432111.1 TIGRFAM: peptidase T; KEGG: cat:CA2559_08441 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004432112.1 KEGG: cat:CA2559_12233 hypothetical protein YP_004432113.1 KEGG: rbi:RB2501_00641 two-component system response regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_004432114.1 PFAM: amidohydrolase; KEGG: ilo:IL0310 metal-dependent hydrolase YP_004432115.1 KEGG: rbi:RB2501_00646 hypothetical protein YP_004432116.1 KEGG: cat:CA2559_11993 hypothetical protein YP_004432117.1 KEGG: zpr:ZPR_2429 histidine kinase YP_004432118.1 KEGG: cat:CA2559_12608 hypothetical protein YP_004432119.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: zpr:ZPR_1914 DNA polymerase III subunit gamma/tau; SMART: AAA ATPase YP_004432120.1 PFAM: tRNA-hydroxylase; KEGG: gfo:GFO_1831 tRNA hydroxylase YP_004432121.1 PFAM: Redoxin domain protein; KEGG: gfo:GFO_2503 thiol-disulfide oxidoreductase YP_004432122.1 KEGG: spu:589640 hypothetical LOC589640 YP_004432123.1 KEGG: fps:FP0703 Crp/Fnr family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004432124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: zpr:ZPR_4570 acetyltransferase, GNAT family YP_004432125.1 KEGG: hor:Hore_04230 Cna B domain protein YP_004432126.1 KEGG: amd:AMED_1145 RDD domain-containing protein YP_004432127.1 KEGG: cat:CA2559_00290 hypothetical protein YP_004432128.1 KEGG: tcx:Tcr_1102 hypothetical protein YP_004432129.1 KEGG: tau:Tola_0707 hypothetical protein YP_004432130.1 KEGG: tau:Tola_0706 hypothetical protein YP_004432131.1 KEGG: mms:mma_0801 RNA-directed DNA polymerase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase) YP_004432132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: zpr:ZPR_0392 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004432133.1 PFAM: Protein of unknown function DUF2136; KEGG: gfo:GFO_0923 hypothetical protein YP_004432134.1 KEGG: gfo:GFO_0922 HTH_3 family transcriptional regulator protein YP_004432135.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sli:Slin_1715 glycerophosphoryl diester phosphodiesterase YP_004432136.1 KEGG: pcb:PC000977.01.0 hypothetical protein YP_004432137.1 KEGG: ptm:GSPATT00009472001 hypothetical protein YP_004432138.1 KEGG: ptm:GSPATT00008196001 hypothetical protein YP_004432139.1 PFAM: GCN5-related N-acetyltransferase; KEGG: zpr:ZPR_4646 acetyltransferase (GNAT) family protein YP_004432140.1 PFAM: major facilitator superfamily MFS_1; KEGG: ant:Arnit_0722 major facilitator superfamily protein YP_004432141.1 KEGG: fps:FP0867 hypothetical protein YP_004432142.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: cat:CA2559_10463 aminopeptidase YP_004432144.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: gfo:GFO_2331 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein YP_004432145.1 PFAM: Redoxin domain protein; KEGG: cat:CA2559_08356 hypothetical protein YP_004432146.1 KEGG: gfo:GFO_2333 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_004432147.1 KEGG: gfo:GFO_2336 membrane protein YP_004432148.1 KEGG: gfo:GFO_2337 hypothetical protein YP_004432149.1 KEGG: zpr:ZPR_1229 ABC-type transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004432150.1 KEGG: fps:FP1047 hypothetical protein YP_004432151.1 KEGG: zpr:ZPR_1227 translaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_004432152.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cat:CA2559_10768 oxidoreductase YP_004432153.1 KEGG: cat:CA2559_08091 hypothetical protein YP_004432154.1 PFAM: nitroreductase; KEGG: cat:CA2559_06275 hypothetical protein YP_004432155.1 PFAM: thioesterase superfamily protein; KEGG: fjo:Fjoh_2108 thioesterase superfamily protein YP_004432156.1 PFAM: protein of unknown function DUF218; KEGG: cat:CA2559_06205 hypothetical protein YP_004432157.1 TIGRFAM: gliding motility-associated ABC transporter permease protein GldF; KEGG: fps:FP1089 gliding motility protein GldF YP_004432158.1 KEGG: cat:CA2559_08361 GldG; TIGRFAM: gliding-associated ABC transporter substrate-binding component GldG; PFAM: ABC-type uncharacterised transport system YP_004432159.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: zpr:ZPR_1831 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_004432160.1 PFAM: peptidase M28; KEGG: cat:CA2559_08756 aminopeptidase YP_004432161.1 KEGG: tva:TVAG_077500 hypothetical protein YP_004432162.1 PFAM: LmbE family protein; KEGG: zpr:ZPR_1659 glcNAc-PI de-N-acetylase YP_004432163.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gfo:GFO_0761 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme YP_004432164.1 KEGG: fba:FIC_00870 hypothetical protein YP_004432165.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cat:CA2559_09031 transcriptional regulator, MarR family protein YP_004432166.1 KEGG: cat:CA2559_09183 metal-dependent hydrolase YP_004432167.1 KEGG: cat:CA2559_08331 hypothetical protein YP_004432168.1 PFAM: Protein of unknown function DUF2254, membrane; KEGG: gfo:GFO_2295 hypothetical protein YP_004432169.1 KEGG: ppa:PAS_chr4_0478 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate YP_004432170.1 KEGG: rba:RB4383 hypothetical protein YP_004432171.1 PFAM: transcription elongation factor GreA/GreB domain-containing protein; KEGG: cat:CA2559_01570 transcription elongation factor YP_004432172.1 PFAM: Pirin domain protein; KEGG: fba:FIC_00549 possible pirin family protein YP_004432173.1 PFAM: MscS Mechanosensitive ion channel; KEGG: cat:CA2559_10518 MscS mechanosensitive ion channel YP_004432174.1 PFAM: protein of unknown function DUF74; KEGG: ele:Elen_1899 protein of unknown function DUF74 YP_004432175.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gfo:GFO_1518 hypothetical protein YP_004432176.1 KEGG: gfo:GFO_2540 hypothetical protein YP_004432177.1 KEGG: cat:CA2559_03445 hypothetical protein YP_004432178.1 KEGG: cat:CA2559_11188 hypothetical protein YP_004432179.1 PFAM: metallophosphoesterase; KEGG: cat:CA2559_13193 hypothetical protein YP_004432180.1 KEGG: cat:CA2559_13198 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004432181.1 KEGG: gfo:GFO_2051 hypothetical protein YP_004432182.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cat:CA2559_13208 thiol:disulfide interchange protein YP_004432183.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sde:Sde_2987 YD repeat-containing protein YP_004432184.1 PFAM: MscS Mechanosensitive ion channel; KEGG: zpr:ZPR_2251 small-conductance mechanosensitive ion channel protein YP_004432185.1 KEGG: cat:CA2559_08121 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_004432186.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: zpr:ZPR_2343 cysteine synthase/cystathionine beta-synthase YP_004432187.1 KEGG: gfo:GFO_1795 S9 family peptidase; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_004432188.1 PFAM: Uncharacterised protein family UPF0133; KEGG: cat:CA2559_08096 hypothetical protein YP_004432189.1 PFAM: OmpA/MotB domain protein; KEGG: cat:CA2559_08086 hypothetical protein YP_004432190.1 KEGG: gfo:GFO_1799 L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004432191.1 KEGG: gfo:GFO_1801 hypothetical protein YP_004432192.1 KEGG: cat:CA2559_09713 hypothetical protein YP_004432193.1 KEGG: cat:CA2559_09708 DNA topoisomerase IV subunit B YP_004432194.1 KEGG: cat:CA2559_09703 hypothetical protein YP_004432195.1 KEGG: fjo:Fjoh_0094 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004432196.1 KEGG: cat:CA2559_08476 inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60 kDa inner membrane insertion protein YP_004432197.1 TIGRFAM: CTP synthase; KEGG: zpr:ZPR_2908 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_004432198.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: zpr:ZPR_0865 IMP dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_004432199.1 KEGG: cat:CA2559_08501 hypothetical protein YP_004432200.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gfo:GFO_2512 TonB-dependent outer membrane receptor YP_004432201.1 SMART: HTTM domain protein; KEGG: cat:CA2559_08511 vitamin K-dependent gamma-carboxylase YP_004432202.1 PFAM: Peptidase M75, Imelysin; KEGG: cat:CA2559_08516 hypothetical protein YP_004432203.1 KEGG: cat:CA2559_08521 hypothetical protein YP_004432204.1 KEGG: cat:CA2559_08526 hypothetical protein YP_004432205.1 KEGG: maq:Maqu_3825 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004432206.1 KEGG: zpr:ZPR_3101 hypothetical protein YP_004432207.1 KEGG: zpr:ZPR_3103 YrdC domain-containing protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_004432208.1 TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: cat:CA2559_06110 tRNA nucleotidyltransferase; SMART: metal-dependent phosphohydrolase HD region YP_004432209.1 PFAM: Iron sulphur-containing domain, CDGSH-type; KEGG: swp:swp_0971 glutamate synthase domain protein YP_004432210.1 KEGG: dfe:Dfer_1371 beta-lactamase YP_004432211.1 KEGG: gfo:GFO_2157 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004432212.1 KEGG: gfo:GFO_2290 hypothetical protein YP_004432213.1 KEGG: cat:CA2559_06055 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004432214.1 KEGG: zpr:ZPR_3109 hypothetical protein YP_004432215.1 KEGG: cat:CA2559_00800 hypothetical protein YP_004432216.1 KEGG: zpr:ZPR_3106 hypothetical protein YP_004432217.1 PFAM: cytochrome oxidase assembly; KEGG: cat:CA2559_06105 cytochrome oxidase assembly protein YP_004432218.1 KEGG: cpi:Cpin_3219 hypothetical protein YP_004432219.1 KEGG: cat:CA2559_06220 dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004432220.1 KEGG: rbi:RB2501_13729 hypothetical protein YP_004432221.1 KEGG: zpr:ZPR_2315 hypothetical protein YP_004432222.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cat:CA2559_11298 short chain dehydrogenase YP_004432223.1 KEGG: cat:CA2559_11303 deoxyribodipyrimidine photolyase-class I; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_004432224.1 KEGG: vap:Vapar_5238 DoxX family protein YP_004432225.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fjo:Fjoh_4444 short-chain dehydrogenase/reductase SDR YP_004432226.1 KEGG: lbl:LBL_2564 hypothetical protein YP_004432227.1 KEGG: rbi:RB2501_13699 hypothetical protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20 YP_004432228.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cat:CA2559_06310 hypothetical protein YP_004432229.1 PFAM: protein of unknown function DUF1486; KEGG: cat:CA2559_10133 hypothetical protein YP_004432230.1 KEGG: dfe:Dfer_0741 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004432231.1 KEGG: zpr:ZPR_3157 hypothetical protein YP_004432232.1 KEGG: rbi:RB2501_00236 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase YP_004432233.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: rbi:RB2501_00241 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_004432234.1 KEGG: rbi:RB2501_00246 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding YP_004432235.1 PFAM: extracellular solute-binding protein family 5; KEGG: cat:CA2559_09061 oligopeptide/dipeptide ABC transporter, peptide-binding protein YP_004432236.1 KEGG: zpr:ZPR_3588 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal YP_004432237.1 PFAM: thioesterase superfamily protein; KEGG: gfo:GFO_0631 thioesterase superfamily protein