-- dump date 20120504_151551 -- class Genbank::CDS -- table cds_note -- id note YP_122156.1 highly similar to partition protein ParB YP_122157.1 Highly similar to partition protein SopA/ParA YP_122158.1 similar to hypothetical replication protein RepB YP_122159.1 similar to hypothetical replicative protein RepA YP_122160.1 similar to unknown proteins YP_122161.1 similar to major facilitator superfamily (MFS) transporter YP_122165.1 similar to unknown protein YP_122166.1 similar to molybdopterin converting factor 2 (subunit 1) YP_122167.1 similar to molybdenum cofactor synthesis protein 3 YP_122168.1 Weakly similar to conserved hypothetical proteins YP_122171.1 Weakly similar to carbon storage regulator CsrA YP_122172.1 Similar to E.coli TraT complement resistance protein YP_122175.1 similar to transposase YP_122176.1 similar to plasmid DNA replication protein YP_122177.1 similar to fimbrial protein precursor (Pilin) YP_122178.1 weakly similar to conjugative transfer protein TraL YP_122179.1 Weakly similar to conjugative transfer protein TraE YP_122180.1 Weakly similar to conjugative transfer protein TraK YP_122181.1 weakly similar to conjugative transfer protein TraB YP_122182.1 hypothetical gene YP_122183.1 weakly similar to conjugative transfer protein TraC YP_122184.1 Weakly similar to TrbI protein YP_122185.1 weakly similar to conjugative transfer protein TraW YP_122186.1 similar to conjugative transfer protein TraU YP_122187.1 Weakly similar to conjugative transfer protein TrbC YP_122188.1 TraN; TrhN; involved in stabilizing mating pairs during plasmid conjugation; F plasmid TraN appears to recognize OmpA in the recipient cell YP_122189.1 Similar to putative conjugative transfer protein TraF YP_122190.1 Weakly similar to putative conjugative transfer protein TrbB YP_122191.1 Similar to conjugative transfer protein TraH YP_122192.1 similar to sex pilus assembly and mating pair protein TraG YP_122193.1 Highly similar to conjugative transfer protein TraD YP_122194.1 similar to conjugative transfer protein TraI YP_122202.1 similar to putative anti restriction protein KlcA YP_122204.1 Similar to abortive infection bacteriophage resistance protein YP_122205.1 Similar to eukaryotic hypersensitive-induced response protein YP_122206.1 Similar to transposase (Tn3 family) YP_122207.1 Similar to resolvase TnpR YP_122208.1 Similar to conserved hypothetical protein YP_122209.1 Similar to ABC transporter (ATP-binding protein) YP_122210.1 similar to unknown proteins YP_122215.1 hypothetical gene YP_122220.1 Weakly similar to conserved hypothetical protein YP_122221.1 Similar to ATPase components of ABC transporters YP_122222.1 Similar to multidrug resistance ABC transporter ATP-binding protein YP_122223.1 Weakly similar to Legionella longbeachae spectinomycin 3' adenylyltransferase YP_122224.1 N-terminal part similar to conserved hypothetical protein YP_122225.1 Fusion of three acetyltransferase YP_122226.1 Similar to conserved hypothetical protein YP_122227.1 Similar to hypothetical protein YP_122228.1 Weakly similar to MerR family transcriptional regulators YP_122229.1 penicilin binding protein domain YP_122230.1 Similar to transcriptional regulators YP_122231.1 similar to penicillin-binding protein 2 (FtsI) YP_122232.1 Similar to beta-lactamase YP_122233.1 hypothetical polysaccharide deacetylase-related, fusion protein YP_122234.1 Similar to conserved hypothetical protein YP_122235.1 Similar to unknown protein YP_122236.1 Similar to dihydrofolate reductase and methyltransferase YP_122237.1 Similar to acetyltransferase, GNAT family YP_122238.1 Similar to hypothetical protein YP_122239.1 Similar to pyridoxamine 5'-phosphate oxidase YP_122240.1 similar to unknown protein YP_122241.1 hypothetical gene YP_122242.1 Weakly similar to alpha/beta hydrolase fold family protein YP_122243.1 Similar to transcriptional regulator YP_122244.1 Weakly similar to stability protein StbE YP_122245.1 Weakly similar to stability protein StbD YP_122247.1 Highly similar to spectinomycin 3' adenylyltransferase YP_122248.1 Highly similar to Legionella longbeachae unknown protein YP_122249.1 Highly similar to Legionella longbeachae unknown protein YP_122251.1 similar to unknown protein YP_122252.1 Highly similar to Legionella longbeachae putative transcriptional regulatory protein YP_122253.1 Highly similar to Legionella longbeachae unknown protein, ankyrin repeat containing protein YP_122254.1 Highly similar to L.longbeachae sensor histidine kinase protein YP_122255.1 Similar to hypothetical protein YP_122257.1 conserved hypothetical protein YP_122259.1 Similar to hypothetical transcriptional regulator YP_122260.1 conserved hypothetical protein YP_122261.1 similar to hypothetical protein YP_122262.1 Weakly similar to probable transcriptional regulator YP_122263.1 Weakly similar to DNA alkylation repair enzyme YP_122264.1 Similar to hypothetical protein YP_122265.1 weakly similar to lysE family transporter protein YP_122266.1 similar to acetyltransferase protein YP_122267.1 Similar to N-terminal part of hypothetical protein YP_122268.1 similar to esterase YP_122269.1 similar to shikimate kinase (AroK) YP_122270.1 similar to aminoglycoside 3'-phosphotransferase YP_122272.1 Putative adenine-specific DNA methylase YP_122273.1 Weakly similar to acetyltransferase YP_122275.1 Weakly similar to acetyltransferase YP_122276.1 Similar to unknown protein YP_122277.1 similar to unknown protein YP_122278.1 bifunctional protein, similar to acetyl transferase and to methyl transferase YP_122279.1 similar to acetyltransferase, GNAT family YP_122280.1 Similar to conserved hypothetical protein YP_122281.1 similar to acetyltransferase (C-terminal part) YP_122283.1 Some similarity with transcriptional regulator, MerR family YP_122285.1 Similar to alanyl tRNA synthetase YP_122286.1 Similar to hypothetical protein YP_122288.1 Weakly similar to transcriptional regulator YP_122289.1 Similar to conserved hypothetical protein YP_122290.1 Weakly similar to acetyltransferase YP_122291.1 C-terminal part similar to acetyltransferase YP_122292.1 Weakly similar to DNA topology modulation protein YP_122293.1 weakly similar to regulatory protein recX YP_122294.1 Similar to integrase proteins YP_122353.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_122357.1 similar to peptidylarginine deiminase and related enzymes YP_122358.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis YP_122359.1 carbon-nitrogen hydrolase family protein YP_122361.1 Similar to host factor-1 protein YP_122362.1 Similar to GTP-binding protein HflX YP_122363.1 Similar to thioredoxin YP_122365.1 Similar to other protein YP_122366.1 Similar to conserved hypothetical protein YP_122367.1 Similar to multidrug resistance efflux pump YP_122370.1 similar to outer membrane efflux proteins YP_122371.1 Similar to Legionella zinc metalloproteinase precursor YP_122372.1 integral membrane protein YP_122373.1 similar to conserved hypothetical protein YP_122374.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA YP_122375.1 membrane protein YP_122377.1 catalyzes the transfer of palmitate to lipid A YP_122378.1 similar to amino acid permease YP_122379.1 similar to low-affinity inorganic phosphate transporter YP_122380.1 similar to ubiquinone biosynthesis protein YP_122383.1 Similar to aminopeptidase YP_122387.1 Similar to conserved hypothetical protein YP_122388.1 Similar to arginine transport system periplasmic binding protein YP_122389.1 Ankyrin repeat protein YP_122390.1 Similar to transposase (IS4 family) YP_122391.1 Similar to unknown proteins YP_122392.1 Similar to hypothetical protein YP_122393.1 Similar to conserved hypothetical protein YP_122395.1 Similar to conserved hypothetical protein YP_122397.1 Similar to sterol desaturase YP_122400.1 Similar to antibiotic acetyltransferase YP_122401.1 Similar to acetyltransferase YP_122402.1 similar to amino acid permease family proteins YP_122403.1 integral membrane protein YP_122406.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate YP_122407.1 Similar to hypothetical protein YP_122409.1 Similar to lysR family transcriptional regulator YP_122411.1 Similar to part of sdbB protein (substrates of the Legionella pneumophila Dot/Icm system) YP_122412.1 Similar to transcriptional regulator, MerR family YP_122413.1 Similar to glutaredoxin YP_122417.1 Similar to transcriptional regulator HipB YP_122418.1 Similar to plasmidic transfer origin protein TraK YP_122422.1 Similar to transposase (ISL3 family) YP_122423.1 Similar to phage-related integrase proteins YP_122424.1 Similar to phage-related proteins YP_122425.1 Similar to transcriptional regulator YP_122426.1 Similar to L.pneumophila LvrA protein YP_122427.1 hypothetical gene YP_122428.1 Similar to cation/multidrug efflux pump YP_122429.1 similar to membrane-fusion protein involved in transport YP_122430.1 Similar to outer membrane efflux protein YP_122432.1 hypothetical gene YP_122434.1 Similar to transposase (IS5 family) YP_122436.1 Similar to aspartate aminotransferase YP_122437.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_122438.1 regulatory protein (GGDEF and EAL domains) YP_122439.1 similar to other proteins YP_122440.1 Similar to conserved hypothetical protein YP_122441.1 Similar to conserved hypothetical protein YP_122442.1 similar to proline aminopeptidase P II YP_122443.1 similar to 2-octaprenyl-6-methoxyphenol hydroxylase YP_122444.1 similar to monooxygenase YP_122448.1 similar to unknown proteins YP_122449.1 similar to unknown proteins YP_122450.1 secreted protein YP_122451.1 membrane protein YP_122453.1 Similar to arginine-binding periplasmic protein YP_122454.1 conserved hypothetical protein YP_122457.1 Similar to exoribonuclease RNase R YP_122458.1 similar to RNA methyltransferase YP_122459.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway YP_122460.1 Similar to 5'-nucleotidase YP_122462.1 Weakly similar to response regulator YP_122464.1 similar to UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase YP_122466.1 3-oxoacyl-[acyl-carrier-protein] synthase YP_122467.1 similar to acetyltransferase YP_122468.1 similar to peptide methionine sulfoxide reductase msrA YP_122469.1 Similar to conserved hypothetical protein, predicted membrane protein YP_122470.1 similar to xanthine/uracil permeases YP_122471.1 Similar to conserved hypothetical protein YP_122474.1 Similar to farnesyl-diphosphate farnesyltransferase (Squalene synthetase) YP_122475.1 Similar to transposase (IS4 family) YP_122476.1 Ankyrin repeat protein YP_122477.1 Similar to predicted signal transduction protein. Contains EAL motifs YP_122478.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_122479.1 Similar to conserved hypothetical protein YP_122480.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein YP_122481.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_122482.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_122484.1 Some similarity with L. pneumophila IcmL/DotI YP_122485.1 Similar to ABC transporter, permease protein YP_122486.1 Similar to ABC transporter, ATP-binding protein YP_122488.1 similar to cytochrome c4 YP_122489.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_122491.1 Highly similar to acetyl-CoA synthetase YP_122492.1 Similar to 3-hydroxyisobutyrate dehydrogenase YP_122493.1 Similar to C. burnetii methylmalonate-semialdehyde dehydrogenase MmsA YP_122494.1 Weakly similar to conserved hypothetical protein YP_122495.1 Some similarity with eukaryotic proteins, coiled-coil protein YP_122496.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_122497.1 hypothetical, similar to hypothetical proteins YP_122498.1 Similar to N-terminal part of ProQ, activator of ProP osmoprotectant transporter (truncated?) YP_122499.1 Similar to hypothetical protein YP_122501.1 Similar to pyruvate kinase II PykA, glucose stimulated YP_122502.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_122504.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_122507.1 Similar to Wolinella succinogenes hypothetical protein YP_122508.1 Similar to Wolinella succinogenes hypothetical protein YP_122509.1 Similar to Wolinella succinogenes hypothetical protein YP_122510.1 Similar to Wolinella succinogenes hypothetical protein -RecB family exonuclease YP_122511.1 Similar to phage repressor YP_122514.1 similar to carbon storage regulator gene csrA YP_122518.1 traC protein YP_122519.1 component of the type IV secretion system YP_122526.1 component of type IV secretion system YP_122529.1 Highly similar to L.pneumophila TraA-like protein YP_122531.1 some similarity with TraD protein YP_122532.1 similar to unknown protein YP_122533.1 similar to unknown proteins YP_122534.1 Similar to cytosine/adenosine deaminases YP_122535.1 similar to membrane proteins YP_122537.1 Similar to transcriptional repressors (RecA-mediated autopeptidases) and prophage repressors YP_122539.1 Similar to phage excisionase YP_122540.1 Similar to phage integrase YP_122541.1 Similar to hypothetical protein YP_122542.1 Similar to hypothetical protein YP_122543.1 Similar to adenine specific DNA methylase (Mod-related) YP_122544.1 similar to Type III restriction-modification enzyme, helicase subunit YP_122545.1 Similar to transposase YP_122546.1 Similar to unknown proteins YP_122547.1 Ankyrin repeat protein YP_122548.1 Similar to unknown proteins YP_122549.1 Similar to conserved hypothetical proteins YP_122551.1 Similar to conserved hypothetical protein YP_122552.1 Some similarity with nucleoside hydrolase YP_122553.1 Similar to N-terminal part of sidC YP_122554.1 similar to unknown proteins, possibly interrupted by an IS element YP_122555.1 hypothetical gene YP_122557.1 Similar to hypothetical protein YP_122562.1 regulatory protein (GGDEF domain) YP_122563.1 regulatory protein (EAL domain) YP_122564.1 Similar to type I methionine aminopeptidase proteins YP_122565.1 Similar to conserved hypothetical protein YP_122566.1 Predicted membrane protein YP_122568.1 Similar to conserved hypothetical protein YP_122569.1 Similar to conserved hypothetical protein YP_122570.1 Similar to conserved hypothetical protein YP_122571.1 similar to conserved hypothetical protein YP_122572.1 similar to unknown proteins YP_122573.1 Similar to hypothetical protein YP_122574.1 Similar to C-terminal part of paraquat-inducible protein YP_122575.1 Similar to hypothetical ABC transporter (permease) YP_122576.1 Protein with a F-box domain YP_122578.1 Similar to transcriptional regulator (LysR family) YP_122579.1 Similar to pyoverdine biosynthesis protein PvcA YP_122580.1 Similar to pyoverdine biosynthesis protein PvcB YP_122581.1 similar to FAD monooxygenase, PheA/TfdB family YP_122582.1 some similarity with transporters YP_122583.1 Catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism YP_122585.1 some similarity with methyltransferases YP_122587.1 Similar to protease heat shock protein YP_122590.1 Similar to conserved hypothetical protein YP_122591.1 Similar to Zn metalloprotein YP_122592.1 Similar to predicted acyl-CoA transferases YP_122598.1 similar to conserved hypothetical protein YP_122600.1 Similar to chitin-binding protein CbpD YP_122602.1 similar to cytochrome d ubiquinol oxidase subunit I YP_122603.1 similar to cytochrome d ubiquinol oxidase subunit II YP_122604.1 similar to conserved hypothetical protein YP_122605.1 membrane protein YP_122606.1 Similar to hypothetical protein YP_122607.1 similar to oxydoreductase YP_122609.1 similar to serine/threonine-protein kinase (conserved domain) YP_122612.1 Similar to sensory protein (eukaryotic) YP_122613.1 similar to deoxyribodipyrimidine photolyase phrB YP_122614.1 similar to membrane protein LrgB YP_122615.1 Predicted membrane protein, similar to conserved hypothetical protein LrgA YP_122616.1 similar to transcriptional regulator, lysR family YP_122617.1 Similar to conserved hypothetical protein YP_122618.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_122620.1 similar to unknown protein YP_122621.1 similar to conserved hypothetical protein YP_122622.1 similar to unknown protein YP_122623.1 Similar to NADH-ubiquinone oxidoreductase chain 5 YP_122624.1 similar to transcriptional regulator, lysR family YP_122625.1 Similar to toxin secretion ABC transporter ATP-binding protein YP_122626.1 Similar to RND efflux membrane fusion proteins YP_122627.1 similar to outer membrane component of multidrug efflux pump YP_122629.1 Similar to amino acid transporters YP_122631.1 Similar to 3-oxacyl-(acyl-carrier-protein) reductase YP_122632.1 Similar to proline/betaine transporter ProP YP_122633.1 Similar to conserved hypothetical protein YP_122638.1 Hypothetical gene YP_122639.1 regulatory protein (GGDEF domain) YP_122641.1 similar to cation transport ATPase YP_122642.1 Similar to Fe2+/Zn2+ uptake regulation proteins YP_122645.1 Similar to conserved hypothetical protein YP_122647.1 Similar to hydrolase YP_122648.1 similar to betaine aldehyde dehydrogenase BetB YP_122649.1 similar to 4-aminobutyrate aminotransferase YP_122651.1 similar to glutaminase YP_122652.1 Similar to D-3 phosphoglycerate dehydrogenase SerA YP_122653.1 Similar to dehydrogenase YP_122654.1 similar to oxydoreductase YP_122655.1 similar to C-terminal part of conserved hypothetical protein YP_122658.1 similar to arsenate reductase YP_122659.1 similar to fatty acid desaturase YP_122660.1 similar to ATP-dependent RNA helicase RhlE YP_122661.1 Similar to N-terminal part of eukaryotic RNA-binding protein precursor YP_122662.1 Similar to unknown protein; membrane protein YP_122663.1 similar to acetyltransferase YP_122665.1 similar to outer membrane protein YP_122666.1 N-terminal part similar to N-terminal part of conserved hypothetical protein YP_122667.1 similar to multidrug resistance proteins YP_122670.1 Similar to transposase (IS4 family) YP_122671.1 similar to conserved hypothetical protein YP_122673.1 Similar to C-terminal part of DNA polymerase, bacteriophage-type YP_122674.1 Similar to transporter, MFS family YP_122675.1 weakly similar to amidase YP_122679.1 Similar to multicopper oxidase YP_122681.1 Similar to magnesium and cobalt transport proteins YP_122682.1 Similar to predicted hydrolase YP_122683.1 similar to conserved hypothetical protein YP_122684.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_122686.1 similar to conserved hypothetical protein YP_122687.1 Similar to transporter of the major facilitator superfamily (MFS) YP_122688.1 Similar to transcriptional regulators YP_122690.1 Unknown YP_122691.1 regulatory protein (EAL domain) YP_122692.1 regulatory protein (GGDEF domain) YP_122693.1 Similar to two-component sensor histidine kinase YP_122694.1 Similar to conserved hypothetical protein YP_122695.1 similar to transcriptional regulator lysR family YP_122696.1 protein with ankyrin motif YP_122697.1 similar to amino acid transporter YP_122698.1 Some similarity with eukaryotic proteins YP_122699.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate YP_122702.1 similar to oxidoreductase, short chain dehydrogenase/reductase family YP_122703.1 hypothetical gene YP_122704.1 signal peptide predicted YP_122705.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_122706.1 similar to conserved hypothetical protein YP_122707.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_122708.1 Similar to conserved hypothetical protein YP_122709.1 Weakly similar to chromate transport protein YP_122711.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA YP_122713.1 similar to nucleotidyltransferase family protein YP_122714.1 Similar to conserved hypothetical protein YP_122715.1 Similar to organic solvent tolerance protein YP_122716.1 Similar to peptidyl-prolyl cis-trans isomerase SurA YP_122719.1 similar to eukaryotic proteins YP_122720.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_122721.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_122723.1 binds directly to 23S ribosomal RNA YP_122724.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_122725.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_122726.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_122727.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_122728.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_122729.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_122730.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_122731.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_122732.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_122733.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_122734.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_122735.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_122736.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_122737.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_122738.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_122739.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_122740.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_122741.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_122742.1 one of the stabilizing components for the large ribosomal subunit YP_122743.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_122744.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_122745.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_122746.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_122747.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the Legionella proteins appear to contain the zinc-binding motif YP_122748.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_122749.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_122750.1 binds 5S rRNA along with protein L5 and L25 YP_122751.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_122752.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_122753.1 late assembly protein YP_122754.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_122755.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_122756.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_122757.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_122758.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_122759.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_122760.1 is a component of the macrolide binding site in the peptidyl transferase center YP_122762.1 transport protein, MFS family YP_122763.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_122764.1 similar to acyl carrier proteins YP_122765.1 similar to hydroxymyristoyl-(acyl carrier protein) dehydratase YP_122766.1 similar to 3-oxoacyl-[acyl-carrier-protein]synthase II YP_122767.1 similar to 3-oxoacyl-[acyl-carrier-protein] synthase beta chain YP_122768.1 similar to lipid A biosynthesis acyltransferase YP_122771.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_122772.1 lipopeptide YP_122773.1 Unknown YP_122774.1 similar to phospholipase/carboxylesterase YP_122775.1 similar to conserved hypothetical proteins YP_122776.1 similar to conserved hypothetical proteins YP_122777.1 similar to other protein YP_122779.1 regulatory protein (GGDEF domain) YP_122783.1 similar to conserved hypothetical proteins YP_122784.1 similar to conserved hypothetical proteins YP_122785.1 similar to hypothetical protein modification enzyme YP_122787.1 similar to hypothetical proteins YP_122788.1 Similar to hyperosmotically inducible periplasmic proteins YP_122791.1 similar to LemA from Coxiella burnetii YP_122792.1 metalloprotease YP_122793.1 Highly similar to ABC-type multidrug transport system, permease component YP_122794.1 Highly similar to ATP-binding component of ABC transporter YP_122796.1 similar to prolyl/lysyl hydroxylase YP_122797.1 Weakly similar to Zinc metalloprotease YP_122800.1 similar to methylated-DNA-protein-cysteine S-methyltransferase YP_122801.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_122802.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_122803.1 similar to 16S rRNA processing protein RimM YP_122804.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_122805.1 similar to signal recognition particle protein Ffh YP_122807.1 Ankyrin repeat protein YP_122808.1 similar to amino acid antiporter YP_122810.1 similar to conserved hypothetical proteins YP_122812.1 Predicted membrane protein, similar to hypothetical proteins YP_122813.1 similar to transmembrane proteins YP_122814.1 similar to conserved hypothetical proteins YP_122815.1 similar to hypothetical proteins YP_122816.1 similar to conserved hypothetical proteins, hypothetical cytochrome oxidase assembly protein YP_122817.1 converts protoheme IX and farnesyl diphosphate to heme O YP_122818.1 similar to hypothetical proteins YP_122819.1 similar to ribosomal protein S6 modification enzyme YP_122820.1 similar to hypothetical proteins YP_122821.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_122822.1 similar to 6-phosphogluconolactonase YP_122823.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate YP_122824.1 similar to glucokinase YP_122825.1 similar to 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase YP_122826.1 similar to sugar transport protein YP_122827.1 similar to eukaryotic glucoamylase precursor (Glucan 1,4-alpha-glucosidase) YP_122828.1 similar to transcriptional regulator (XRE-family) YP_122829.1 similar to hypothetical proteins YP_122830.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_122832.1 similar to N-terminus of Diadenosine tetraphosphate (Ap4A) hydrolase YP_122833.1 similar to hypothetical proteins YP_122834.1 similar to outer membrane proteins YP_122835.1 similar to Multidrug resistance efflux pump YP_122836.1 Unknown YP_122837.1 similar to hypothetical proteins YP_122838.1 transcriptional regulator YP_122840.1 similar to hypothetical protein YP_122841.1 ankyrin repeat protein YP_122864.1 involved in de novo purine biosynthesis YP_122865.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_122868.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_122869.1 catalyzes the formation of oxaloacetate from pyruvate YP_122871.1 lipase LipA (L.pneumophila) YP_122872.1 similar to conserved hypothetical proteins YP_122873.1 Similar to fructose-bisphosphate aldolase YP_122874.1 Similar to ferredoxin--NADP reductase YP_122876.1 conserved hypothetical protein YP_122877.1 similar to CDP-diacylglycerol-serine O-phosphatidyltransferase (Phosphatidylserine synthase) YP_122878.1 similar to sugar transport PTS phosphocarrier protein Hpr YP_122879.1 similar to sigma-54 modulation protein YP_122880.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen YP_122881.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_122882.1 required for 70S ribosome assembly YP_122883.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_122884.1 similar to endo-1,4-beta-glucanase (hypothetical) YP_122885.1 Protein with ankyrin domain YP_122888.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_122889.1 similar to hypothetial proteins YP_122890.1 similar to transcriptional regulator of arginine metabolism YP_122891.1 similar to glutamine-binding periplasmic protein precursor YP_122892.1 similar to amino acid ABC transporter permease YP_122893.1 similar to amino acid (glutamine) ABC transporter (ATP-binding protein) YP_122894.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_122895.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_122897.1 similar to adenosine deaminase YP_122898.1 similar to ABC-type branched-chain amino acid transport systems, periplasmic component YP_122899.1 similar to carboxy-terminal protease family protein YP_122900.1 similar to membrane-bound metallopeptidase YP_122901.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_122903.1 phospholipase C YP_122904.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate YP_122906.1 similar to membrane-associated Zn-dependent protease EcfE YP_122907.1 similar to protective surface antigen YP_122908.1 similar to outer membrane proteins YP_122910.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_122911.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_122912.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_122913.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_122916.1 Weakly similar to eukaryotic phytanoyl coA dioxygenase YP_122918.1 similar to oxidoreductase,aldo/keto reductase family,related to diketogulonate reductase YP_122922.1 similar to methyltransferase YP_122923.1 Similar to adenosine phosphosulfate (APS) kinase YP_122924.1 similar to acetyltransferase, GNAT family YP_122925.1 weakly similar to C.burnetii hypothetical protein YP_122926.1 similar to P.aeruginosa probable fosfomycin resistance protein YP_122927.1 similar to aminoglycoside 6'-N-acetyltransferase YP_122928.1 Unknown virulence protein YP_122930.1 similar to conserved hypothetical protein YP_122934.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_122935.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_122937.1 catalyzes the interconversion of succinyl-CoA and succinate YP_122939.1 Similar to pyridoxine 5'-phosphate oxidase YP_122942.1 similar to transport proteins YP_122943.1 C-terminal part similar to unknown virulence protein YP_122944.1 similar to DNA-binding proteins Fis YP_122946.1 similar to outer membrane lipoproteins YP_122947.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_122948.1 similar to Gamma-glutamyltranspeptidase YP_122949.1 weakly similar to D-amino acid dehydrogenase, C-terminal cAMP binding motif YP_122950.1 similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_122951.1 similar to suppressor of groEL YP_122952.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_122953.1 similar to hypothetical proteins YP_122954.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_122956.1 similar to fatty acid desaturase YP_122958.1 similar to acetoacetyl-CoA reductase YP_122959.1 similar to acetoacetyl-CoA reductase YP_122960.1 similar to hypothetical proteins YP_122962.1 similar to hypothetical proteins YP_122963.1 similar to Bacillus subtilis spore maturation protein A YP_122964.1 similar to uncharacterized membrane protein, similar to Bacillus subtilis spore maturation protein B YP_122965.1 similar to membrane proteins related to metalloendopeptidases YP_122966.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_122967.1 Similar to conserved hypothetical protein YP_122968.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense YP_122969.1 catalyzes the formation of inosine from adenosine YP_122971.1 Similar to phosphate permease YP_122972.1 Similar to conserved hypothetical protein YP_122973.1 Similar to hypothetical protein YP_122974.1 Similar to conserved hypothetical protein YP_122975.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function YP_122976.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_122978.1 Similar to competence protein comM YP_122979.1 Similar to conserved hypothetical protein YP_122981.1 similar to 5-formyltetrahydrofolate cyclo-ligase YP_122982.1 similar to unknown protein YP_122983.1 similar to aminodeoxychorismate lyase (PabC) YP_122984.1 Similar to conserved hypothetical protein. Predicted membrane protein. YP_122985.1 Similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_122986.1 similar to unknown protein YP_122988.1 similar to poly-beta-hydroxybutyrate synthase YP_122989.1 Similar to conserved hypothetical protein YP_122990.1 with SufCD activates cysteine desulfurase SufS YP_122991.1 Similar to ABC transporter ATP-binding protein YP_122992.1 Similar ABC transporter, permease component YP_122993.1 similar to cysteine desulfurase and to selenocysteine lyase YP_122994.1 NifU protein family, possibly involved in the formation or repair of [Fe-S] clusters YP_122995.1 Similar to conserved hypothetical protein YP_122996.1 similar to lysyl-tRNA synthetase YP_122997.1 Similar to methyltransferase YP_122998.1 similar to a domain of alanyl-tRNA synthetase YP_122999.1 Similar to major facilitator family transporter YP_123000.1 similar to unknown protein YP_123001.1 similar to alcohol dehydrogenase YP_123003.1 similar to hypothetical protein YP_123004.1 Similar to polypeptide deformylase YP_123005.1 Similar to Na+/H+ antiporters YP_123006.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity YP_123007.1 similar to unknown protein YP_123008.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis YP_123009.1 Similar to L.pneumophila major outer membrane protein YP_123010.1 Similar to 3-methyladenine-DNA glycosylase I YP_123014.1 similar to probable transmembrane protein YP_123015.1 Similar to hypothetical protein, predicted membrane protein YP_123017.1 Similar to unknown eukaryotic proteins YP_123018.1 weakly similar with DNA uptake/competence proteins YP_123019.1 competence and adherence associated protein -CAP- YP_123020.1 weakly similar to type 4 fimbrial biogenesis protein PilY1 YP_123021.1 Similar to Tfp pilus assembly protein PilX YP_123022.1 Similar to Tfp pilus assembly protein PilW YP_123023.1 weakly similar with pre-pilin leader sequence YP_123024.1 similar to type-4 fimbrial pilin related protein YP_123025.1 Similar to peptidoglycan GlcNAc deacetylase proteins YP_123027.1 similar to hypothetical proteins YP_123028.1 catalyzes the formation of thymidine 5'-phosphate from thymidine YP_123029.1 Similar to major facilitator family transporter YP_123030.1 Similar to major facilitator family transporter YP_123031.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose YP_123032.1 heat shock protein involved in degradation of misfolded proteins YP_123033.1 heat shock protein involved in degradation of misfolded proteins YP_123036.1 similar to tRNA processing ribonuclease BN YP_123038.1 Similar to flavoprotein WrbA (Trp repressor binding protein) YP_123039.1 Similar to conserved hypothetical protein YP_123040.1 Similar to exodeoxyribonuclease YP_123041.1 Similar to exodeoxyribonuclease III XthA YP_123042.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_123043.1 Similar to NADP-dependent malic enzyme YP_123044.1 Similar to major facilitator family transporter YP_123045.1 Similar to major facilitator family transporter YP_123047.1 Similar to tyrosine-specific transport protein YP_123048.1 Similar to tyrosine-specific transport protein YP_123049.1 lipoprotein, similar to other proteins YP_123051.1 similar to membrane protein YP_123052.1 Similar to ABC-type multidrug transport, ATP-binding protein YP_123053.1 Similar to ABC transporter (permease) YP_123054.1 Similar to transposase (IS4 family) YP_123055.1 similar to unknow proteins YP_123056.1 Similar to ABC transporter permease protein, hypothetical start codon YP_123057.1 similar to outer membrane efflux protein YP_123058.1 Similar to soluble lytic murein transglycosylase YP_123060.1 Predicted membrane protein YP_123061.1 Similar to conserved hypothetical protein YP_123062.1 Similar to conserved hypothetical protein YP_123063.1 Similar to hypothetical protein YP_123064.1 Similar to predicted esterae YP_123065.1 similar to NADH-ubiquinone oxidoreductase YP_123066.1 converts acetoacetate to acetone and carbon dioxide YP_123067.1 Similar to unknown protein YP_123068.1 similar to adenylate cyclase YP_123069.1 Similar to conserved hypothetical protein YP_123070.1 similar to conserved hypothetical protein YP_123072.1 similar to amino acid ABC transporter, periplasmic binding protein. YP_123073.1 similar to glutamine synthetase adenylyltransferase YP_123074.1 Similar to conserved hypothetical protein YP_123075.1 similar to unknown protein YP_123076.1 similar to ABC-type multidrug transport system, ATPase component YP_123077.1 similar to ABC transporter, permease component YP_123078.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit YP_123079.1 Similar to thiol:disulfide interchange protein DsbD YP_123080.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_123081.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_123082.1 Weakly similar to DNA-binding ferritin-like protein (oxidative damage protectant) YP_123083.1 Similar to conserved hypothetical protein, predicted membrane protein YP_123084.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_123085.1 Similar to ABC transporter ATP-binding protein YP_123086.1 LigA protein(Legionella Infectivity Gene A) YP_123087.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_123088.1 Ankyrin repeat protein YP_123090.1 Similar to inorganic transporter and to carbonic anhydrase (bi-functional) YP_123091.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs YP_123092.1 similar to outer membrane protein TolC YP_123093.1 Similar to L-isoaspartate carboxylmethyltransferase protein pcm YP_123094.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine YP_123095.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism YP_123096.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_123097.1 Similar to enhanced entry protein EnhA YP_123098.1 Similar to conserved hypothetical protein, predicted membrane protein YP_123099.1 Similar to conserved hypothetical protein, predicted membrane protein YP_123100.1 probable outer membrane protein YP_123101.1 weakly similar to L. pneumophila IcmL protein YP_123102.1 catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate YP_123103.1 Similar to oxidoreductase YP_123104.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_123105.1 Similar to conserved hypothetical protein YP_123106.1 Similar to transporters YP_123107.1 Similar to transposase (IS5 family) YP_123108.1 hypothetical gene YP_123109.1 Repeats in the N-terminal domain, similar to autotransporter YP_123110.1 Similar to two-component sensor histidine kinase YP_123111.1 Similar to two component transcriptional regulator YP_123114.1 Similar to proton/sodium-glutamate symport protein YP_123115.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_123116.1 Highly similar to multidrug efflux transporter YP_123117.1 Similar to efflux transporter, RND family YP_123120.1 Similar to predicted periplasmic or secreted lipoprotein YP_123121.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_123122.1 similar to unknown proteins YP_123123.1 Similar to N utilization substance protein B homolog YP_123126.1 Similar to predicted permease YP_123127.1 Some similarity with outer surface protein YP_123128.1 weakly similar to outer membrane protein YP_123130.1 Similar to glutamine-dependent NAD(+) synthetase YP_123131.1 Similar to DNA/RNA helicases, superfamily II, SNF2 family YP_123132.1 Similar to conserved hypothetical protein YP_123134.1 similar to alanine racemase 1 YP_123135.1 similar to surface antigens (17 kDa) YP_123136.1 Similar to conserved hypothetical protein YP_123137.1 similar to unknown proteins YP_123138.1 similar to unknown proteins YP_123139.1 regulatory protein (GGDEF domain) YP_123140.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_123141.1 similar to conserved hypothetical protein YP_123144.1 Similar to LPS biosynthesis protein YP_123145.1 Similar to imidazole glycerol phosphate synthase subunit HisF YP_123146.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_123150.1 Similar to acetyl transferase YP_123151.1 similar to polysaccharide biosynthesis protein YP_123157.1 similar to NAD dependent epimerase/dehydratase family protein YP_123162.1 Similar to sialic acid synthase YP_123169.1 Similar to glycosyltransferase YP_123171.1 similar to glycosyltransferase YP_123172.1 similar to glycosyl transferase YP_123173.1 similar to glyoxalase II YP_123174.1 affects carbohydrate metabolism; has regulatory role in many processes YP_123175.1 Similar to O-antigen acetylase YP_123177.1 Similar to phosphopantetheinyl transferase YP_123178.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_123179.1 Similar to cell cycle protein MesJ YP_123182.1 Similar to alginate o-acetyltransferase AlgI YP_123183.1 Similar to L-serine dehydratase YP_123185.1 Similar to AmpG protein YP_123186.1 Similar to transposase YP_123188.1 similar to unknown proteins YP_123189.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_123191.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_123192.1 Similar to sulfate transporter YP_123193.1 Similar to acyl-CoA dehydrogenase YP_123194.1 Similar to hydrolase YP_123195.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_123196.1 Similar to Na(+)/H(+) antiporter YP_123198.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_123199.1 Similar to succinyl-diaminopimelate desuccinylase YP_123200.1 Similar to other proteins YP_123201.1 functions in MreBCD complex in some organisms YP_123202.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_123204.1 Similar to ribosomal large subunit pseudouridine synthase (Pseudouridylate synthase) YP_123207.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA YP_123209.1 Similar to transposase (IS4 family) YP_123210.1 Similar to unknown proteins YP_123211.1 Similar to lipopolysaccharide biosynthesis glycosyltransferase YP_123212.1 Similar to O-antigen biosynthesis protein YP_123213.1 hypothetical gene YP_123214.1 Similar to uncharacterized membrane protein YP_123215.1 similar to peptidase proteins YP_123216.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_123217.1 similar to outer membrane protein YP_123218.1 similar to unknown proteins YP_123219.1 regulatory protein (GGDEF and EAL domains) YP_123221.1 Similar to flavin-containing monooxygenases YP_123222.1 similar to oxidoreductases, short-chain dehydrogenase/reductase family YP_123223.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_123224.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_123225.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity YP_123226.1 Similar to ABC transporter, ATP-binding protein YP_123227.1 Similar to conserved hypothetical protein YP_123228.1 Similar to conserved hypothetical protein YP_123229.1 Similar to conserved hypothetical protein YP_123230.1 Similar to arabinose 5-phosphate isomerase YP_123231.1 Similar to ABC transporter, ATP-binding protein YP_123232.1 Similar to permease of ABC transporter YP_123233.1 similar to unknown protein YP_123234.1 similar to unknown protein YP_123235.1 weakly similar to anti-anti-sigma factor YP_123236.1 Similar to conserved hypothetical protein YP_123237.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_123238.1 Similar to conserved hypothetical protein YP_123239.1 Highly similar to ABC transporter, ATP-binding protein YP_123240.1 Similar to conserved hypothetical protein YP_123241.1 similar to membrane-fusion protein YP_123245.1 SohB; periplasmic protein; member of the peptidase S49 family YP_123246.1 ATP-binding protein; required for proper cytochrome c maturation YP_123250.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane YP_123254.1 similar to cytochrome c-type biogenesis protein YP_123255.1 Similar to conserved hypothetical protein YP_123256.1 Similar to outer membrane lipoprotein YP_123257.1 Similar to methyladenine DNA glycosylase YP_123258.1 similar to ATP-dependent DNA helicase RecQ YP_123259.1 similar to acyl-CoA dehydrogenase YP_123260.1 similar to enoyl-CoA hydratase/carnithine racemase YP_123261.1 similar to enoyl-CoA hydratase/isomerase family protein YP_123263.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein YP_123268.1 Similar to uncharacterized proteins YP_123270.1 regulatory protein (GGDEF domain) YP_123272.1 predicted transmembrane protein YP_123274.1 similar to glycosyl hydrolase YP_123275.1 Similar to amino acid transporter YP_123276.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. YP_123277.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway YP_123278.1 Similar to acetyltransferase YP_123279.1 Similar to cystathionine beta-lyase YP_123280.1 regulatory protein (GGDEF and EAL domains) YP_123281.1 Similar to kynurenine 3-monooxygenase YP_123282.1 Similar to unknown proteins YP_123283.1 Similar to eukaryotic cytokinin oxidase YP_123286.1 Similar to sodium/calcium antiporter YP_123288.1 Similar to A/G-specific adenine glycosylase YP_123289.1 Similar to conserved hypothetical protein YP_123292.1 Similar to hypothetical protein YP_123293.1 Similar to protease YP_123294.1 Similar to hypothetical protein YP_123295.1 Similar to 3-hydroxyacyl-CoA dehydrogenase type II YP_123296.1 Similar to unknown protein YP_123297.1 Similar to negative regulator of flagellin synthesis (Anti-sigma-28 factor) YP_123298.1 required for the assembly of the flagellar basal body P-ring YP_123299.1 similar to cytochrome c-type protein YP_123300.1 Similar to enhanced entry protein EnhA YP_123301.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_123302.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_123303.1 Similar to S-adenosyl-methyltransferase MraW YP_123304.1 similar to cell division protein FtsL YP_123306.1 Similar to UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase YP_123307.1 similar to erythronate-4-phosphate dehydrogenase YP_123309.1 similar to unknown protein YP_123311.1 hypothetical gene YP_123314.1 Similar to alanine dehydrogenase YP_123315.1 Similar to peptidoglycan synthetase; penicillin-binding protein 1A YP_123322.1 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_123323.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_123324.1 similar to unknown protein YP_123325.1 Similar to universal stress protein A YP_123327.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme YP_123328.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_123329.1 Similar to keto-hydroxyglutarate aldolase YP_123332.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_123335.1 similar to other proteins YP_123336.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_123337.1 Similar to 2-oxoglutarate ferredoxin oxidoreductase alpha subunit YP_123338.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_123339.1 Predicted membrane protein, similar to transporter YP_123340.1 Similar to hydrolase YP_123342.1 Similar to conserved hypothetical protein YP_123343.1 Similar to long-chain-fatty-acid--CoA ligase YP_123345.1 Similar to conserved hypothetical protein YP_123347.1 Similar to hypothetical protein YP_123349.1 Similar to extracellular solute-binding protein YP_123350.1 Similar to ABC transporter, permease protein YP_123351.1 Similar to ABC transporter, permease protein YP_123354.1 catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate YP_123355.1 Similar to LphB protein YP_123356.1 similar to nucleoside-diphosphate sugar epimerases YP_123360.1 Similar to amino acid (lysine) permease YP_123361.1 Similar to eukaryotic ectonucleoside triphosphate diphosphohydrolase (apyrase) YP_123363.1 Similar to transposase (ISL3 family) YP_123366.1 Similar to conserved hypothetical protein YP_123367.1 Similar to UmuD protein YP_123368.1 similar to DNA repair proteins UmuC YP_123369.1 hypothetical gene YP_123371.1 hypothetical gene YP_123372.1 Similar to antirestriction protein YP_123373.1 similar to single-stranded DNA-binding protein (ssb) YP_123376.1 Weakly similar to integrase YP_123379.1 similar to unknown proteins YP_123382.1 Similar to conserved hypothetical protein YP_123384.1 membrane protein similar to conserved hypothetical protein YP_123385.1 Similar to conserved hypothetical protein; signal peptide predicted YP_123386.1 Similar to conserved hypothetical protein YP_123387.1 similar to unknown proteins YP_123388.1 similar to unknown proteins YP_123389.1 Similar to conserved hypothetical protein YP_123390.1 Similar to conserved hypothetical protein YP_123391.1 Similar to conserved hypothetical protein YP_123396.1 C-terminal part similar to C-terminal part of conserved hypothetical protein YP_123397.1 Similar to conserved hypothetical protein YP_123398.1 similar to unknown protein YP_123400.1 similar to PilL protein YP_123401.1 similar to carbon storage regulator YP_123402.1 Similar to Legionella LvrB protein YP_123403.1 Similar to LvrA protein YP_123404.1 Similar to phage repressor YP_123405.1 similar to DNA modification methylase YP_123407.1 Similar to very-short-patch-repair endonuclease vsr YP_123409.1 Similar to major facilitator family transporter YP_123410.1 Similar to peptide deformylase YP_123414.1 Similar to transcriptional regulator YP_123415.1 Similar to prophage integrase YP_123417.1 Similar to methyltransferase YP_123418.1 similar to conserved hypothetical protein YP_123420.1 Similar to beta-phosphoglucomutase YP_123423.1 Similar to other protein YP_123424.1 Ankyrin repeat protein YP_123426.1 secreted protein YP_123428.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress YP_123430.1 membrane protein YP_123431.1 membrane protein YP_123433.1 Some similarity with eukaryotic protein YP_123437.1 Similar to hypothetical proteins YP_123438.1 regulatory protein (GGDEF and EAL domains) YP_123439.1 similar to other proteins YP_123440.1 acts as a promotor non-specific transcription repressor YP_123441.1 similar to chitinase YP_123442.1 Similar to B. subtilis PaiA transcriptional repressor of sporulation YP_123443.1 similar to D-alanyl-D-alanine carboxypeptidase YP_123444.1 PilD-dependent secreted protein, tartrate-sensitive acid phosphatase YP_123447.1 similar to membrane-bound lytic murein transglycosylase YP_123448.1 Similar to amino acid ABC transporter (amino acid binding protein) YP_123450.1 Similar to amino acid ABC transporter YP_123451.1 Some similarity with eukaryotic proteins YP_123452.1 Similar to long-chain acyl-CoA synthetase YP_123453.1 Similar to guanine deaminase YP_123457.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge YP_123459.1 Similar to 2-nitropropane dioxygenase YP_123460.1 Similar to transcriptional regulator, (TetR family?) YP_123461.1 Similar to hypothetical protein YP_123464.1 Similar to spermidine/putrescine-binding periplasmic protein precursor potD (SPBP) YP_123465.1 Similar to spermidine/putrescine transport system permease protein potC. integral membrane protein YP_123466.1 Similar to spermidine/putrescine transport system permease protein PotB YP_123467.1 functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase YP_123468.1 Hypothetical protein, similar to endonuclease YP_123469.1 Similar to dehydrogenase YP_123472.1 Similar to thermostable carboxypeptidase 1 YP_123473.1 Similar to acetyltransferase YP_123474.1 coiled-coil protein YP_123476.1 similar to E. coli Ada protein (O6-methylguanine-DNA methyltransferase) YP_123479.1 Similar to amine oxidase YP_123481.1 Similar to eukaryotic pyruvate decarboxylase YP_123482.1 Similar to aminopeptidase YP_123483.1 Similar to L.pneumophila lipase LipB YP_123484.1 Some similarity with eukaryotic proteins YP_123485.1 similar to drug metabolite transport protein (DMT family) YP_123487.1 Similar to predicted phosphoribosyl transferase YP_123488.1 similar to other proteins YP_123489.1 Similar to permeases of the major facilitator superfamily (MFS) YP_123490.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_123491.1 Weakly similar to uridine kinase YP_123492.1 Some similarity with eukaryotic proteins YP_123493.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_123494.1 regulatory protein (GGDEF and EAL domains) YP_123495.1 Similar to unknown protein YP_123496.1 similar to Pyruvate formate-lyase activating enzyme YP_123498.1 Similar to conserved hypothetical protein, similar to C-terminal part of EnhC protein YP_123499.1 Similar to Pseudomonas sensor protein PilS (member of the 2 component response regulator PilS/PilR involved in the regulation of the expression of the type 4 fimbriae) YP_123500.1 Similar to type 4 fimbriae expression regulatory protein PilR (two-component response regulator) YP_123502.1 similar to hydrolase YP_123503.1 similar to protease YP_123505.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_123508.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_123509.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_123512.1 Similar to competence lipoprotein comL precursor YP_123513.1 Required for efficient pilin antigenic variation YP_123514.1 Similar to low affinity potassium transport system protein Kup YP_123516.1 Similar to unknown protein YP_123517.1 Similar to N-acetyl-beta-glucosaminidase YP_123518.1 similar to unknown proteins YP_123519.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis YP_123520.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_123522.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_123523.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate YP_123524.1 similar to histidinol-phosphate aminotransferase YP_123525.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_123526.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_123527.1 Weakly similar to E. coli Trp operon repressor YP_123530.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_123531.1 Similar to cold shock proteins YP_123532.1 similar to unknown protein YP_123533.1 Similar to conserved hypothetical protein YP_123534.1 Similar to transcriptional regulator, MarR family YP_123535.1 Similar to conserved hypothetical protein YP_123536.1 Similar to acetyltransferase YP_123537.1 similar to amino acid (threonine) efflux protein YP_123538.1 Similar to transcriptional regulator, MarR family YP_123539.1 Similar to conserved hypothetical protein YP_123540.1 hypothetical gene YP_123542.1 similar to unknown protein YP_123543.1 Similar to thiocyanate hydrolase gamma subunit YP_123544.1 Simimlar to thiocyanate hydrolase alpha subunit YP_123545.1 Similar to thiocyanate hydrolase beta subunit YP_123546.1 similar to unknown protein YP_123547.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_123548.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod YP_123549.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_123550.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production YP_123551.1 the hook connects flagellar basal body to the flagellar filament YP_123552.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod YP_123553.1 makes up the distal portion of the flagellar basal body rod YP_123554.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod YP_123555.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_123556.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space YP_123557.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_123558.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes. YP_123561.1 Similar to conserved hypothetical protein YP_123562.1 similar to transport protein YP_123563.1 Similar to electron transfer flavoprotein-ubiquinone oxidoreductase YP_123564.1 Similar to multidrug resistance ABC transporter ATP-binding protein YP_123565.1 Similar to conserved hypothetical protein YP_123567.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate YP_123569.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_123572.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine YP_123573.1 Similar to conserved hypothetical protein YP_123574.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_123575.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_123578.1 similar to sensor histidine kinase YP_123579.1 similar to two component response regulator YP_123580.1 Involved in cell division; probably involved in intracellular septation YP_123581.1 Similar to membrane bound lytic murein transglycosylase YP_123583.1 Similar to conserved hypothetical protein YP_123585.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_123588.1 Similar to conserved hypothetical protein YP_123589.1 Similar to conserved hypothetical protein YP_123590.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_123591.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis YP_123592.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_123593.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_123594.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_123595.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_123596.1 Similar to hypothetical sulfatase YP_123600.1 Similar to oxydoreductase YP_123601.1 Similar to adenylate cyclase YP_123602.1 Similar to drug resistance transporter, MFS superfamily YP_123603.1 Similar to multidrug resistance efflux pump protein YP_123604.1 similar to FrgA (Iron- and Fur- regulated gene), iron repressed gene; promotes intracellular infection; similar to aerobactin synthetases YP_123605.1 similar to unknown protein YP_123607.1 Some similarities with eukaryotic protein YP_123610.1 Similar to conserved hypothetical protein YP_123612.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_123613.1 Similar to major facilitator superfamily (MFS) transporter YP_123614.1 Similar to enhanced entry protein EnhA YP_123615.1 Similar to flagellar protein FliS YP_123616.1 Similar to flagellar hook-associated protein 2 (flagellar capping protein) YP_123618.1 structural flagella protein YP_123619.1 Similar to acetyl-CoA carboxylase beta subunit YP_123620.1 Similar to dihydrofolate:folylpolyglutamate synthetase FolC YP_123621.1 Similar to conserved hypothetical protein YP_123622.1 Similar to colicin V production protein DedE YP_123623.1 Similar to nicotinate-nucleotide adenylyltransferase NadD YP_123624.1 Similar to DNA polymerase III, delta subunit HolA YP_123625.1 Similar to rare lipoprotein B RlpB YP_123626.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_123627.1 Similar to apolipoprotein N-acyltransferase (ALP N-acyltransferase) (copper homeostasis protein CutE) YP_123628.1 Similar to dehydrogenase YP_123629.1 Similar to aldehyde dehydrogenase YP_123630.1 Similar to 3-hydroxyacyl-CoA dehydrogenase YP_123631.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_123634.1 similar to unknown protein YP_123635.1 regulatory protein (GGDEF and EAL domains) YP_123643.1 Similar to conserved hypothetical protein YP_123644.1 Similar to conserved hypothetical protein YP_123645.1 Similar to 1-aminocyclopropane-1-carboxylate deaminase YP_123647.1 molecular chaperone YP_123648.1 Similar to DNA-binding protein Fis YP_123649.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_123650.1 Similar to oxidoreductase YP_123651.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_123654.1 Similar to hypothetical protein YP_123655.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_123656.1 Similar to conserved hypothetical protein YP_123657.1 Similar to proton/peptide symporter family protein YP_123658.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_123659.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_123660.1 Similar to aldehyde dehydrogenase YP_123661.1 Similar to short chain dehydrogenase YP_123662.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids YP_123663.1 Similar to DNA polymerase III, epsilon chain YP_123665.1 Some similarity with EnhA protein YP_123667.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors YP_123668.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_123670.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_123671.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_123675.1 carries the fatty acid chain in fatty acid biosynthesis YP_123677.1 Similar to conserved hypothetical protein YP_123678.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_123679.1 Similar to DNA polymerase III, delta' subunit YP_123680.1 Similar to type 4 fimbrial biogenesis protein PilZ YP_123681.1 Similar to deoxyribonuclease belonging to the TatD DNAse family YP_123682.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_123683.1 Similar to major facilitator membrane proteins YP_123684.1 similar to multidrug translocase YP_123685.1 Similar to dolichol-phosphate mannosyltransferase YP_123686.1 similar to glycosyl transferase YP_123687.1 similar to choline kinase YP_123688.1 Similar to conserved hypothetical proteins YP_123689.1 similar to unknown protein YP_123690.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_123691.1 Similar to thioredoxin proteins YP_123692.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane YP_123695.1 Similar to purine nucleoside phosphorylase proteins YP_123697.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_123698.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_123700.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_123701.1 Similar to conserved hypothetical protein YP_123702.1 similar to unknown protein YP_123703.1 similar to polysaccharide biosynthesis protein YP_123704.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_123706.1 Similar to short-chain dehydrogenase YP_123709.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin YP_123711.1 Similar to oxidase YP_123712.1 Similar to 2-deoxyribose-5-phosphate aldolase YP_123713.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation YP_123714.1 Similar to cytidine/deoxycytidine deaminase Cdd YP_123718.1 Similar to magnesium and cobalt efflux protein CorC YP_123719.1 similar to conserved hypothetical protein YP_123720.1 similar to phosphate starvation-inducible protein PhoH YP_123721.1 similar to TrpH protein YP_123722.1 Similar to translation factor YP_123723.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_123724.1 similar to segregation and condensation protein A YP_123725.1 similar to segregation and condensation protein B YP_123726.1 Similar to ribosomal large subunit pseudouridine synthase B (Pseudouridylate synthase) YP_123727.1 Similar to transcriptional regulator, LuxR family YP_123729.1 similar to oxidoreductase YP_123730.1 similar to unknown protein YP_123732.1 Similar to hydrolases YP_123734.1 Similar to probable multidrug efflux protein YP_123735.1 Similar to Legionella pneumophila phospholipase C YP_123736.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S] YP_123738.1 Similar to conserved hypothetical protein YP_123739.1 Similar to aminotransferase YP_123740.1 similar to unknown protein YP_123742.1 Similar to tRNA-dihydrouridine synthase A DusA YP_123743.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins YP_123746.1 similar to conserved hypothetical protein YP_123747.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis YP_123749.1 regulatory protein (EAL domain) YP_123750.1 similar to serine-type D-Ala-D-Ala carboxypeptidase YP_123756.1 Similar to conserved hypothetical protein YP_123757.1 Similar to conserved hypothetical protein YP_123758.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_123759.1 Similar to potassium efflux system kefA YP_123760.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair YP_123763.1 similar to eukaryotic serine threonin protein kinase YP_123764.1 weak similarity to myosin YP_123765.1 similar to unknown protein YP_123766.1 Similar to transcriptional regulator (Lrp family) YP_123767.1 Similar to acetyltransferase, GNAT family YP_123770.1 similar to adenylate cyclase, family 3 YP_123771.1 Some similarity with eukaryotic proteins YP_123773.1 Similar to hypothetical protein YP_123777.1 Some similarities with sidE protein YP_123778.1 Similar to aminopeptidase N YP_123781.1 Similar to oxidoreductase YP_123782.1 Similar to acetyltransferase YP_123785.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_123786.1 Cystein rich protein YP_123787.1 membrane protein YP_123788.1 Similar to sodium/hydrogen antiporter family protein YP_123789.1 Similar to rare lipoprotein A RlpA YP_123790.1 Similar to penicillin-binding protein precursor (D-alanyl-D-alaninecarboxypeptidase fraction C) YP_123791.1 Similar to D-alanine aminotransferase YP_123792.1 Similar to conserved hypothetical protein YP_123793.1 lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse; lipoate-protein ligase B; transfers lipoate to apolipoproteins; involved in lipoate metabolism YP_123794.1 member of a type I secretion system YP_123795.1 member of a type I secretion system YP_123796.1 member of a type I secretion system YP_123797.1 member of a type I secretion system YP_123798.1 member of a type I secretion system YP_123799.1 regulatory protein (GGDEF and EAL domains) YP_123800.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively YP_123801.1 Similar to hypothetical protein YP_123802.1 Similar to conserved hypothetical protein YP_123806.1 cAMP/cGMP binding protein YP_123809.1 similar to conserved hypothetical protein YP_123810.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C YP_123812.1 similar to unknown protein YP_123813.1 Similar to unknown protein YP_123814.1 similar to peptide transport proteins YP_123815.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_123816.1 Similar to rubredoxin protein YP_123817.1 similar to conserved hypothetical protein YP_123818.1 similar to transport proteins YP_123820.1 Similar to 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_123821.1 similar to universal stress protein A UspA YP_123822.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_123823.1 Conserved hypothetical protein YP_123824.1 similar to conserved hypothetical protein YP_123825.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_123827.1 similar to fimbrial biogenesis and twitching motility protein (type 4) YP_123828.1 similar to conserved hypothetical protein YP_123829.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_123831.1 conserved hypothetical protein YP_123833.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine YP_123834.1 similar to cell division inhibitor MinC (septum placement) YP_123835.1 Highly similar to acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase YP_123836.1 Similar to arginine 3rd transport system periplasmic binding protein YP_123837.1 similar to unknown protein YP_123838.1 similar to para-aminobenzoate synthase, component I YP_123839.1 similar to pyruvate dehydrogenase, (E1 alpha subunit) YP_123840.1 similar to pyruvate dehydrogenase E1 (beta subunit) YP_123841.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA YP_123842.1 transmembrane protein YP_123843.1 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component YP_123846.1 similar to eukaryotic thiamine biosynthesis protein NMT-1 YP_123847.1 similar to C.burnetii thiamine biosynthesis oxidoreductase ThiO YP_123848.1 Similar to thiamine biosynthesis protein ThiS YP_123849.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_123850.1 similar to phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase YP_123851.1 similar to molybdopterin biosynthesis protein YP_123852.1 some similarities to 3'-nucleotidase/nuclease YP_123854.1 weakly similar to TolA protein YP_123855.1 Similar to TolR proteins YP_123856.1 Similar to TolQ, involved in the tonB-independent uptake of proteins YP_123858.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_123860.1 Conserved hypothetical protein YP_123861.1 some similarities to aminomethyltransferases YP_123862.1 some similarities to cytochrome B561 YP_123863.1 weakly similar to NADP-specific glutamate dehydrogenase YP_123864.1 similar to unknown proteins YP_123865.1 similar to aldehyde dehydrogenase YP_123866.1 similar to phosphatidylcholine synthase YP_123869.1 similar to unknown protein YP_123870.1 some similarity with Legionella 33 kDa polypeptide YP_123871.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_123872.1 similar to unknown protein YP_123873.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_123874.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_123875.1 similar to carbon storage regulator YP_123877.1 similar to unknown protein, possibly truncated YP_123878.1 similar to alpha subunit of fatty-acid oxidation complex, 3-hydroxyacyl-CoA dehydrogenase YP_123879.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_123882.1 Similar to transposase (ISNCY family) YP_123884.1 Similar to transposase (IS21 family) YP_123885.1 Similar to transposase (IS21 family) YP_123886.1 Similar to transposase (ISL3 family) YP_123887.1 Similar to transposase (ISL3 family) YP_123888.1 Some similarities to eukaryotic proteins YP_123890.1 similar to hypothetical proteins YP_123891.1 Similar to hypothetical proteins YP_123892.1 similar to conserved hypothetical proteins YP_123893.1 similar to phosphoenolpyruvate carboxylase YP_123894.1 similar to MutT/nudix family protein YP_123895.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_123896.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_123897.1 Similar to acetyltransferase, GNAT family YP_123898.1 similar to hypothetical proteins YP_123899.1 similar to unknown protein YP_123900.1 Similar to transcription regulators (MerR Family) YP_123901.1 similar to transcription regulator (MerR family) YP_123902.1 Similar to acetyltransferase, GNAT family YP_123903.1 similar to hypothetical proteins YP_123904.1 similar to multidrug resistance ABC transporter ATP-binding protein YP_123905.1 similar to ATPase components of ABC transporters with duplicated ATPase domains YP_123906.1 Weakly similar to cytochrome C family proteins YP_123907.1 Similar to class-D beta-lactamase YP_123908.1 similar to Cell division protein FtsI/penicillin-binding protein 2 YP_123909.1 Similar to transcriptional regulator (MarR family) YP_123912.1 similar to conserved hypothetical proteins YP_123913.1 similar to unknown protein YP_123915.1 copper efflux ATPase YP_123916.1 Similar to unknown protein YP_123917.1 similar to conserved hypothetical proteins YP_123918.1 similar to conserved hypothetical protein YP_123919.1 similar to 3-beta hydroxysteroid dehydrogenase/isomerase YP_123920.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_123921.1 similar to glycosyl transferase YP_123923.1 Similar to oxidoreductase proteins YP_123924.1 similar to hypothetical proteins YP_123925.1 similar to acetyltransferase, GNAT family YP_123926.1 similar to unknown protein YP_123927.1 similar to permease of the major facilitator superfamily YP_123929.1 similar to conserved hypothetical proteins YP_123930.1 similar to acylaminoacyl-peptidase proteins YP_123931.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_123932.1 similar to outer membrane proteins YP_123933.1 Some similarities with L. pneumophila SidE protein YP_123934.1 similar to conserved hypothetical proteins YP_123935.1 similar to Cytochrome B561 YP_123936.1 similar to conserved hypothetical proteins YP_123937.1 secreted protein YP_123938.1 similar to myo-inositol catabolism protein iolE YP_123939.1 similar to malonic semialdehyde oxidative decarboxylase YP_123940.1 Bifuncional protein similar to IolC (sugar kinase) and IolB YP_123941.1 similar to myo-inositol 2-dehydrogenase YP_123942.1 similar to sugar-proton symporter YP_123944.1 similar to metalloprotease YP_123945.1 similar to hyothetical proteins YP_123946.1 similar to dimethylarginine dimethylaminohydrolase YP_123947.1 similar to amino acid transporter YP_123948.1 similar to hypothetical proteins YP_123950.1 similar to conserved hypothetical proteins YP_123951.1 similar to transport proteins, MFS family YP_123954.1 similar to membrane proteins YP_123964.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_123965.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_123967.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_123969.1 similar to hypothetical proteins YP_123971.1 similar to thiol:disulfide interchange protein YP_123973.1 similar to oxidoreductase, short-chain dehydrogenase/reductase family YP_123975.1 some similarity with flagellar hook-length control protein FliK YP_123977.1 Catalyzes the conversion of citrate to isocitrate YP_123978.1 similar to amino acid antiporter YP_123979.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain YP_123980.1 conserved hypothetical protein YP_123981.1 similar to activator of osmoprotectant transporter ProP (N-terminal part) YP_123982.1 Involved in ubiquinone biosynthesis YP_123983.1 similar to Uracil-DNA glycosylase YP_123986.1 similar to error-prone repair protein YP_123987.1 similar to error-prone repair: SOS-response transcriptional repressors (LexA homologs, RecA-mediated autopeptidases) YP_123988.1 similar to carboxypeptidase G2 and to acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase YP_123990.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH YP_123991.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation YP_123992.1 similar to unknown proteins YP_123993.1 Weakly similar to cytochrome c5 YP_123994.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_123995.1 Catalyzes the phosphorylation of UMP to UDP YP_123996.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_123997.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_123998.1 16 kD immunogenic protein YP_124001.1 ankyrin repeat protein YP_124002.1 similar to methionine aminopeptidase, type I YP_124003.1 similar to PII uridylyl-transferase YP_124004.1 similar to hypothetical proteins YP_124005.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_124006.1 similar to IMP dehydrogenase/GMP reductase YP_124008.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell YP_124009.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA YP_124010.1 similar to hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_124011.1 similar to hypothetical proteins YP_124012.1 similar to sn-glycerol-3-phosphate transport ATP-binding protein YP_124013.1 similar to glycerol-3-phosphate ABC transporter, permease component YP_124014.1 similar to glycerol-3-phosphate ABC transporter, permease components YP_124015.1 similar to quinone oxidoreductase (NADPH:quinone reductase) YP_124016.1 Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation YP_124017.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II YP_124019.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_124020.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_124022.1 similar to Adenylate cyclase 1(ATP pyrophosphate-lyase 1; Adenylylcyclase 1) YP_124025.1 similar to DNA-binding protein fis YP_124026.1 similar to HesB/YadR/YfhF family proteins YP_124027.1 similar to iron-sulpher cluster proteins NifU YP_124028.1 similar cysteine desulfurase YP_124029.1 similar to tRNA/rRNA methyltransferase YP_124030.1 similar to inositol-1-monophosphatase YP_124031.1 similar to signal peptide peptidases YP_124035.1 similar to UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase YP_124036.1 hypothetical gene YP_124037.1 similar to unknown protein YP_124038.1 similar to flagellar protein FliJ YP_124042.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_124044.1 similar to two-component response regulator YP_124045.1 similar to sensor histidine kinase YP_124046.1 conserved hypothetical protein YP_124047.1 similar to periplasmic chaperone LolA YP_124048.1 similar to cell division protein FtsK YP_124050.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys YP_124051.1 similar to rhodanese domain protein YP_124052.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_124054.1 Similar to conserved hypothetical protein YP_124056.1 Catalyzes the rate-limiting step in dNTP synthesis YP_124057.1 Catalyzes the rate-limiting step in dNTP synthesis YP_124059.1 Highly similar to lysyl-tRNA synthetase YP_124060.1 Highly similar to peptide chain release factor 2 YP_124061.1 similar to hypothetical poteins YP_124062.1 Homologous to MotB. These organism have both MotB and MotD. With MotC (a MotA homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. Either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility YP_124063.1 homologous to MotA; this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; these organisms have both MotA and MotC YP_124064.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes YP_124065.1 similar to flagellar synthesis regulator YP_124066.1 positive regulator of class III flagellar genes YP_124067.1 membrane protein involved in the flagellar export apparatus YP_124068.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export YP_124071.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_124076.1 similar to oxidoreductase YP_124077.1 similar to hypothetical oxidoreductase YP_124078.1 similar to transcriptional regulator (LysR family) YP_124081.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_124082.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities YP_124083.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_124085.1 similar to hypothetical proteins YP_124086.1 This protein performs the mismatch recognition step during the DNA repair process YP_124087.1 similar to hypothtical proteins YP_124088.1 similar to hypothetical proteins YP_124089.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_124091.1 Similar to long-chain fatty acid transport protein YP_124092.1 catalyzes the 4-phospho-L-aspartate from L-aspartate and the formation of lysine from meso-2,6-diaminoheptanedioate YP_124093.1 Similar to UvrD/REP helicase family protein YP_124094.1 similar to unknown protein YP_124095.1 Similar to conserved hypothetical protein YP_124097.1 Similar to major facilitator family transporter YP_124099.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate YP_124102.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_124103.1 Predicted transmembrane protein YP_124104.1 Similar to conserved hypothetical protein YP_124105.1 Similar to acyl-CoA dehydrogenase YP_124106.1 Similar to acetyl-CoA acetyltransferase YP_124107.1 hypothetical gene YP_124108.1 similar to Acetyl/propionyl-CoA carboxylase, beta subunit YP_124109.1 similar to enoyl-CoA hydratase/isomerase YP_124110.1 similar to Acetyl/propionyl-CoA carboxylase, alpha subunit YP_124111.1 Similar to hydroxymethylglutaryl-CoA lyase YP_124112.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase YP_124113.1 similar to unknown proteins YP_124114.1 part of the metNIQ transport system for methionine YP_124115.1 Similar to ABC transporter permease protein YP_124116.1 29 kDa immunogenic protein YP_124117.1 Some similarity with eukaryotic protein YP_124119.1 Similar to conserved hypothetical protein YP_124120.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate YP_124122.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_124123.1 Similar to outer membrane protein YP_124124.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. YP_124125.1 similar to proline iminopeptidase YP_124126.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_124127.1 conserved lipoprotein YP_124128.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione YP_124129.1 similar to unknown proteins YP_124130.1 Similar to conserved hypothetical protein YP_124131.1 Similar to transposase (IS4 family) YP_124132.1 hypothetical gene YP_124133.1 membrane protein, similar to permease of the drug/metabolite transporter (DMT) superfamily YP_124135.1 hypothetical protein (rhodanese domain) YP_124137.1 similar to alkaline phosphatase YP_124138.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor YP_124139.1 similar to Enoyl-[acyl-carrier-protein] reductase YP_124142.1 Some similarity with eukaryotic proteins YP_124143.1 similar to peptidyl-prolyl cis-trans isomerase D YP_124144.1 similar to DNA-binding protein HU-beta YP_124145.1 similar to ATP-dependent protease La YP_124146.1 binds and unfolds substrates as part of the ClpXP protease YP_124147.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_124148.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_124150.1 Similar to site specific recombinase, phage integrase family YP_124151.1 Similar to ABC transporter, ATP-binding protein YP_124152.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity YP_124153.1 similar to unknown protein YP_124155.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_124156.1 similar to membrane-bound lytic murein transglycosylase B precursor YP_124157.1 similar to general secretion pathway protein L YP_124158.1 Similar to general secretion pathway protein YP_124159.1 similar to unknown protein YP_124160.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_124161.1 some similarity with eukaryotic proteins YP_124162.1 Similar to alpha,alpha-trehalase YP_124164.1 Similar to lactoylglutathione lyase YP_124165.1 membrane protein YP_124166.1 Some similarity with eukaryotic proteins YP_124169.1 Similar to transposase (IS4 family) YP_124170.1 similar to conserved hypothetical protein YP_124171.1 catalyzes the hydrolysis of acylphosphate YP_124172.1 Q-rich protein YP_124174.1 Similar to esterase/lipase YP_124176.1 Similar to hypothetical protein YP_124177.1 signal peptide predicted YP_124178.1 Similar to major facilitator family transporter (MFS) YP_124179.1 similar to chloride channel protein YP_124181.1 Similar to hypothetical protein YP_124183.1 Similar to hypothetical protein YP_124184.1 Similar to glutathione-regulated potassium-efflux system protein KefC (K(+)/H(+)antiporter) YP_124186.1 similar to unknown protein YP_124187.1 Similar to transposase (IS5 family) YP_124188.1 Similar to MoxR-like ATPases, regulator YP_124189.1 Similar to conserved hypothetical protein YP_124190.1 Similar to unknown protein YP_124191.1 similar to conserved hypothetical protein YP_124193.1 similar to hypothetical protein YP_124195.1 Similar to conserved hypothetical protein YP_124196.1 similar to hypothetical transporter YP_124197.1 similar to eukaryotic ectonucleoside triphosphate diphosphohydrolase (apyrase) YP_124198.1 Similar to conserved hypothetical protein YP_124202.1 Similar to D-alanyl-D-alanine carboxypeptidase YP_124203.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_124205.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis YP_124206.1 similar to type IV pilin PilA YP_124207.1 similar to type IV pilin PilA YP_124208.1 Similar to BolA protein YP_124209.1 Similar to amino acid antiporter YP_124210.1 weakly similar to endoglucanase YP_124211.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS YP_124212.1 Similar to hypothetical protein YP_124213.1 Similar to conserved hypothetical protein YP_124214.1 Similar to ATP-dependent DNA helicase YP_124215.1 Similar to ferredoxin YP_124218.1 Similar to conserved hypothetical protein YP_124219.1 Similar to conserved hypothetical protein YP_124220.1 Similar to conserved hypothetical protein YP_124222.1 ankyrin repeat protein YP_124224.1 conserved hypothetical protein YP_124229.1 similar to unknown protein YP_124230.1 similar to transcription regulators YP_124231.1 similar to methyl transferase YP_124232.1 Similar to conserved hypothetical protein YP_124233.1 Similar to capsular polysaccharide biosynthesis protein YP_124234.1 Similar to N-terminal part of polyketide synthase YP_124235.1 similar to peptide antibiotic synthetase YP_124236.1 similar to acyl-coA dehydrogenase YP_124237.1 similar to 3-hydroxybutyryl-CoA dehydrogenase YP_124238.1 Similar to hypothetical protein YP_124239.1 Similar to conserved hypothetical protein YP_124240.1 similar to 3',5'-cyclic-nucleotide phosphodiesterase precursor (CpdP) YP_124241.1 Similar to transcriptional regulator, LuxR family YP_124247.1 Weakly similar to sphingosine kinase YP_124248.1 Similar to predicted phosphohydrolases YP_124251.1 similar to other protein YP_124252.1 similar to chloromuconate cycloisomerase YP_124254.1 Some similarity with eukaryotic proteins YP_124258.1 similar to unknown protein YP_124259.1 Similar to transposase (IS4 family) YP_124260.1 similar to peptidyl-prolyl cis-trans isomerase proteins YP_124263.1 Similar to transcriptional regulator, TetR family YP_124265.1 hypothetical gene YP_124267.1 Similar to glutathione S-transferase YP_124268.1 Similar to organic hydroperoxide resistance protein YP_124273.1 Some similarity with eukaryotic proteins. Pattern of chromosome condensation regulator conserved. YP_124274.1 Similar to intracellular protease/amidase YP_124277.1 Some similarity with eukaryotic proteins YP_124279.1 Similar to hydantoin-racemase YP_124280.1 Similar to guanine deaminase YP_124282.1 Similar to phosphohistidine phosphatase SixA YP_124283.1 Similar to conserved hypothetical protein YP_124284.1 membrane protein YP_124285.1 Some similarity with eukaryotic proteins YP_124286.1 predicted membrane protein YP_124288.1 Similar to polysaccharide deacetylase-related protein YP_124289.1 Similar to membrane-bound lytic murein transglycosylase YP_124293.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_124294.1 similar to pterin-4-alpha-carbinolamine dehydratase phhB YP_124295.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_124296.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_124297.1 Similar to preprotein translocase YP_124299.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_124300.1 membrane protein YP_124301.1 similar to ABC transporter ATP-binding protein YP_124302.1 Similar to conserved hypothetical protein YP_124303.1 Similar to endoribonuclease L-PSP YP_124306.1 Essential for recycling GMP and indirectly, cGMP YP_124307.1 Similar to conserved hypothetical protein YP_124308.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_124309.1 Similar to twitching motility protein PilT YP_124310.1 Similar to conserved hypothetical protein YP_124311.1 similar to pyrroline-5-carboxylate reductase YP_124312.1 Predicted integral membrane protein YP_124314.1 Similar to conserved hypothetical protein YP_124315.1 Similar to serine protease YP_124316.1 Similar to transcriptional regulator, AraC family YP_124317.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_124318.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_124319.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_124320.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_124321.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_124322.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor YP_124323.1 Similar to 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_124324.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_124325.1 Similar to dihydroneopterin aldolase YP_124326.1 Similar to cell division protein YP_124327.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_124328.1 Similar to transport protein YP_124329.1 catalyzes branch migration in Holliday junction intermediates YP_124331.1 Similar to cation-efflux family protein YP_124332.1 Similar to transporters YP_124333.1 Similar to septum formation protein Maf YP_124334.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_124335.1 Similar to cell division protein ftsB homolog YP_124336.1 Similar to mevalonate kinase YP_124337.1 Similar to diphosphomevalonate decarboxylase YP_124338.1 Similar to organic radical activating enzymes YP_124339.1 Similar to conserved hypothetical protein YP_124341.1 Similar to conserved hypothetical protein YP_124342.1 Similar to ABC-type transport system involved in resistance to organic solvents YP_124343.1 Similar to ABC transporter ATP-binding protein YP_124344.1 Similar to ABC transporter permease protein YP_124348.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_124349.1 Similar to 3-hydroxy-3-methylglutaryl-coenzyme A reductase YP_124350.1 Weakly similar to mevalonate kinase YP_124351.1 Similar to transposase (ISL3 family) YP_124352.1 Similar to poly(3-hydroxyalkanoate) synthetase YP_124354.1 Similar to cold shock protein YP_124355.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA YP_124356.1 Similar to cation efflux protein YP_124358.1 similar to amidase YP_124359.1 Similar to transposase (IS5 family) YP_124363.1 Similar to conserved hypothetical protein YP_124364.1 C-terminal part similar to transposase (IS4 family) YP_124367.1 Similar to conserved hypothetical protein YP_124368.1 Similar to transposase (IS5 family) YP_124370.1 Ankyrin repeat protein YP_124372.1 Similar to transcriptional regulator, LysR family YP_124373.1 Ankyrin repeat protein YP_124375.1 cAMP/cGMP binding protein YP_124376.1 Similar to potassium uptake protein YP_124377.1 ankyrin repeat protein YP_124379.1 Similar to conserved hypothetical proteins YP_124382.1 Some similarities with eukaryotic proteins YP_124383.1 regulatory protein (GGDEF domain) YP_124388.1 Similar to protein kinase YP_124389.1 Similar to transcriptional regulator, LysR family YP_124390.1 similar to pyridoxamine 5'-phosphate oxidase YP_124391.1 similar to unknown proteins YP_124392.1 Similar to 3-oxoacyl-[acyl-carrier protein] reductase YP_124394.1 Protein with ankyrin repeat and a F-box domain YP_124395.1 Similar to two-component response regulator YP_124397.1 Similar to conserved hypothetical proteins YP_124402.1 Similar to aminoglycoside 6-adenylyltransferase YP_124403.1 Similar to multidrug resistance ABC transporter ATP-binding protein YP_124405.1 similar to L. pneumophila SdeA protein YP_124409.1 Similar to methyltransferase YP_124410.1 similar to (hydroxyindole) O-methyltransferase YP_124412.1 similar to conserved hypothetical protein YP_124417.1 similar to transcriptional regulator, deoR family YP_124418.1 Similar to acetyltransferases YP_124419.1 similar to conserved hypothetical protein YP_124420.1 predicted membrane protein YP_124421.1 Some similarity with acetyltransferase YP_124422.1 Similar to adenosylhomocysteinase YP_124428.1 Similar to transcriptional regulator, sinR family YP_124429.1 Similar to bacteriophage protein YP_124430.1 similar to phage protein YP_124432.1 Similar to conserved hypothetical protein YP_124435.1 Similar to integrase/recombinase proteins YP_124439.1 Similar to hypothetical hydrolase proteins YP_124440.1 Similar to eukaryotic sphingosine-1-phosphate lyase 1 YP_124441.1 Similar to multidrug efflux RND membrane fusion protein MexE YP_124442.1 Similar to RND multidrug efflux transporter YP_124443.1 similar to peptide synthase YP_124444.1 Similar to two component sensor histidine kinase YP_124445.1 Similar to response regulator YP_124446.1 Similar to eukaryotic SAM dependent methyltransferase YP_124447.1 Similar to conserved hypothetical protein YP_124448.1 similar to polyketide synthase of type I YP_124450.1 Similar to transport proteins YP_124451.1 Some similarity with eukaryotic proteins YP_124452.1 Present a domain similar to IcmL prtein YP_124454.1 Similar to sulfate transporters YP_124455.1 Similar to carbonic anhydrase proteins YP_124456.1 hypothetical gene YP_124457.1 similar to ornithine cyclodeaminase YP_124458.1 Similar to ketosteroid isomerase homolog YP_124460.1 Similar to transporters YP_124463.1 similar to unknown proteins YP_124464.1 similar to unknown protein YP_124465.1 Similar to conserved hypothetical protein YP_124466.1 Periplamic protein weakly similar to AlgJ YP_124467.1 Similar to alginate o-acetyltransferase AlgI YP_124468.1 Predicted integral membrane protein YP_124470.1 similar to unknown protein YP_124471.1 Similar to oxidoreductase YP_124472.1 similar to conserved hypothetical protein YP_124474.1 similar to conserved hypothetical protein YP_124476.1 Similar to hemin binding protein Hbp YP_124477.1 Similar to hypothetical sugar nucleotide epimerase YP_124479.1 Some similarity with eukaryotic protein YP_124480.1 Some similarity with eukaryotic protein YP_124481.1 similar to chitinase YP_124482.1 Similar to choline monooxygenase YP_124483.1 similar to unknown proteins YP_124486.1 similar to unknown protein YP_124488.1 similar to other proteins YP_124489.1 similar to acyl-CoA dehydrogenase YP_124490.1 similar to propionyl-CoA carboxylase beta chain YP_124491.1 similar to outer membrane protein YP_124492.1 Similar to 3-oxoacyl-[acyl-carrier-protein] synthase III YP_124493.1 Similar to acyl-CoA synthetase YP_124494.1 Similar to acyl-CoA synthetase YP_124495.1 similar to acyl carrier protein (ACP) YP_124496.1 Similar to 3-oxoacyl-[acyl-carrier protein] reductase YP_124497.1 Similar to 3-oxoacyl-(acyl-carrier-protein) synthase III YP_124498.1 Similar to acyl-carrier protein YP_124499.1 Similar to multidrug resistance protein YP_124500.1 similar to sterol desaturase-related protein YP_124501.1 similar to nitric oxide reductase YP_124502.1 similar to multidrug resistance ABC transporter ATP-binding protein YP_124503.1 membrane protein YP_124505.1 Similar to conserved hypothetical protein YP_124506.1 catalyzes the formation of formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine from GTP YP_124507.1 similar to hypothetical protein YP_124508.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_124511.1 Similar to C4-dicarboxylate transport protein YP_124513.1 Similar to hypothetical protein DedA YP_124515.1 Similar to amidotransferase YP_124516.1 similar to alcohol dehydrogenase YP_124517.1 similar to aldehyde dehydrogenase YP_124518.1 Similar to glutamine synthase YP_124519.1 Similar to hypothetical protein YP_124520.1 similar to conserved hypothetical protein YP_124522.1 Similar to metallo-beta-lactamase superfamily proteins YP_124524.1 membrane protein YP_124526.1 Similar to poly(3-hydroxyalkanoate) synthetase YP_124527.1 Catalyses the synthesis of acetylphosphate from acetyl-CoA and inorganic phosphate YP_124529.1 Similar to curved DNA-binding protein (sequence similarity to chaperone protein dnaJ) YP_124530.1 similar to unknown protein YP_124531.1 Similar to acyltransferase YP_124532.1 Similar to conserved hypothetical protein YP_124533.1 Similar to imidazolonepropionase and related amidohydrolases YP_124534.1 membrane protein YP_124535.1 Similar to conserved hypothetical protein YP_124536.1 Similar to conserved hypothetical protein YP_124538.1 membrane protein YP_124539.1 Similar to glycerol-3-phosphate-binding periplasmic protein precursor YP_124540.1 Similar to glycerophosphodiester phosphodiesterase YP_124541.1 Similar to hypothetical protein YP_124542.1 Similar to leucine dehydrogenase YP_124543.1 Similar to O-methyltransferase YP_124545.1 similar to unknown protein YP_124546.1 Similar to glutathione S-transferase (maleylacetoacetate isomerase) YP_124548.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_124550.1 similar to ATP-binding component of ABC transporter YP_124551.1 Similar to ABC transporter, permease component YP_124552.1 Similar to CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_124553.1 Similar to phosphatase YP_124558.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA YP_124559.1 similar to ankyrin repeat domain protein YP_124562.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_124563.1 involved in methylation of ribosomal protein L3 YP_124564.1 similar to conserved hypothetical protein YP_124565.1 similar to conserved hypothetical protein YP_124566.1 Similar to glutaredoxin Grx YP_124567.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA YP_124568.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_124569.1 similar to glutamate racemase YP_124572.1 Similar to conserved hypothetical protein YP_124573.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_124575.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate YP_124576.1 Similar to conserved hypothetical protein YP_124577.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine YP_124578.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine YP_124580.1 Similar to serine transporter YP_124581.1 ankyrin repeat protein YP_124582.1 similar to type II secretion system protein-like protein and twitching mobility protein YP_124584.1 Similar to hypothetical protein YP_124585.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_124587.1 Unknown, N-terminal similar to Legionella 33 kDa polypeptide YP_124588.1 catalyzes the bidirectional exonucleolytic cleavage of DNA YP_124589.1 Similar to geranyltranstransferase; farnesyl-diphosphate synthase YP_124590.1 Similar to biotin synthesis protein YP_124591.1 Similar to competence protein ComF YP_124592.1 Similar to membrane-associated metalloprotease proteins YP_124594.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_124595.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_124596.1 Similar to methyltransferase hemK YP_124597.1 Similar to DnaK suppressor protein YP_124600.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system YP_124605.1 Similar to ATP-dependent RNA helicase deaD (cold-shock DEAD-box protein A) YP_124606.1 Similar to conserved hypothetical protein YP_124607.1 Similar to 2,4-dienoyl-CoA reductase YP_124609.1 Similar to alkyl hydroperoxide reductase AhpD YP_124610.1 Similar to alkyl hydroperoxide reductase AhpC YP_124612.1 catalyzes the oxidation of malate to oxaloacetate YP_124613.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose YP_124614.1 Similar to oxygen-independent coproporphyrinogen III oxidase YP_124615.1 Similar to amidase YP_124616.1 Predicted membrane protein YP_124617.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_124618.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_124619.1 Similar to conserved hypothetical protein YP_124622.1 Similar to transposase YP_124623.1 Similar to integrase YP_124625.1 Similar to L.pneumophila proline/betaine transport protein homolog CitA (TphA) YP_124626.1 Similar to acetyltransferase YP_124627.1 Similar to hydrolase YP_124628.1 transcriptional regulator YP_124632.1 Similar to cold shock protein YP_124633.1 Similar to acetoacetyl-CoA reductase YP_124634.1 similar to polyhydroxyalkanoic-acid-synthase YP_124635.1 regulatory protein (GGDEF and EAL domains) YP_124636.1 Similar to conserved hypothetical protein YP_124637.1 Similar to transcriptional regulator, SinR family YP_124639.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit YP_124640.1 Similar to ATP synthase epsilon chain (atpC) YP_124641.1 similar to ATP synthase subunit YP_124642.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0 YP_124643.1 similar to ATP synthase C chain YP_124644.1 Similar to ATP synthase B' chain YP_124645.1 produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit YP_124646.1 Similar to ATP synthase gamma chain YP_124648.1 Similar to NADH oxidoreductase YP_124649.1 similar to unknown protein YP_124650.1 similar to cytochrome c family protein. YP_124651.1 predicted membrane protein YP_124652.1 Predicted membrane protein, similar to hypothetical protein YP_124653.1 similar to unknown protein YP_124655.1 Similar to glutamate dehydrogenase YP_124656.1 Similar to copper efflux ATPase YP_124657.1 predicted transmembrane protein YP_124665.1 Similar to outer membrane lipoprotein YP_124666.1 regulatory protein (GGDEF domain) YP_124667.1 similar to copper efflux ATPase YP_124669.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate YP_124670.1 catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine YP_124671.1 Similar to metallo-beta-lactamase superfamily proteins YP_124675.1 similar to cation transport ATPase YP_124676.1 hypothetical gene YP_124677.1 hypothetical gene YP_124680.1 similar to cation transport ATPase YP_124682.1 Similar to cation efflux system protein CzcB YP_124683.1 Similar to cation efflux system protein CzcC YP_124684.1 similar to unknown protein YP_124685.1 Similar to Legionella pneumophila phage repressor, PrpA YP_124686.1 Similar to Legionella vir region protein LvrA YP_124687.1 Similar to Legionella vir region protein LvrB YP_124688.1 Similar to Legionella vir region protein LvrC YP_124689.1 similar to other proteins YP_124691.1 Similar to hypothetical protein YP_124692.1 Similar to hypothetical protein YP_124693.1 similar to unknown protein YP_124698.1 secreted protein YP_124699.1 Similar to conserved hypothetical protein, secreted protein YP_124700.1 Similar to conserved hypothetical protein YP_124701.1 Similar to conserved hypothetical protein, secreted protein YP_124702.1 Similar to type IV secretory pathway, VirB4 components YP_124703.1 Similar to conserved hypothetical protein YP_124704.1 Similar to conserved hypothetical protein YP_124705.1 Similar to conserved hypothetical protein YP_124707.1 hypothetical gene YP_124708.1 Similar to conserved hypothetical protein YP_124710.1 hypothetical gene YP_124712.1 Similar to transposase (ISL3 family) YP_124714.1 Weakly similar to integrase YP_124715.1 Similar to cobalt-nickel resistance system protein YP_124717.1 Similar to antirestriction protein YP_124718.1 Similar to conserved hypothetical protein YP_124719.1 Similar to hypothetical protein YP_124720.1 Similar to transposase (ISL3 family) YP_124722.1 weakly similar to serine/threonine protein kinase YP_124727.1 hypothetical gene YP_124728.1 similar to transposase YP_124729.1 Similar to unknown protein YP_124732.1 Similar to transcriptional regulator YP_124733.1 hypothetical gene YP_124736.1 Similar to conserved hypothetical protein YP_124737.1 Catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism YP_124738.1 Similar to transporters YP_124740.1 Similar to conserved hypothetical protein YP_124742.1 Similar to hypothetical protein YP_124743.1 hypothetical gene YP_124744.1 Similar to multidrug resistance proteins YP_124746.1 similar to transcriptional regulator, LysR family YP_124750.1 similar to transcriptional regulator, LysR family YP_124751.1 similar to potassium uptake protein Kup YP_124752.1 Some similarity with eukaryotic proteins YP_124753.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH YP_124754.1 conserved hypothetical protein, some similarity with stress proteins YP_124755.1 similar to cation transport ATPase YP_124757.1 outer membrane protease; involved in virulence in many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in Escherichia coli OmpT can degrade antimicrobial peptides; in Yersinia Pla activates plasminogen during infection; in Shigella flexneria SopA cleaves the autotransporter IcsA YP_124758.1 Similar to amino acid transport protein YP_124761.1 hypothetical gene YP_124762.1 Similar to major facilitator family transporter YP_124764.1 Some similarity with eukaryotic proteins YP_124765.1 Similar to bacterioferritin YP_124767.1 Similar to conserved hypothetical protein YP_124768.1 similar to hypothetical peptidases YP_124769.1 Similar to aminoglycoside 6'-N-acetyltransferase YP_124770.1 C-terminal part similar to Legionella unknown virulence protein YP_124772.1 Similar to transcriptional regulator, LysR family YP_124773.1 similar to monooxygenase YP_124775.1 Similar to MutT/nudix family protein YP_124778.1 Similar to oxidoreductase YP_124782.1 regulatory protein (GGDEF domain) YP_124783.1 similar to other proteins YP_124784.1 Similar to conserved hypothetical protein YP_124785.1 Unknown YP_124786.1 Similar to beta-lactamase precursor (Cephalosporinase) YP_124790.1 Some similarities with eukaryotic proteins YP_124791.1 Some similarity with eukaryotic proteins, contains a F-box domain YP_124792.1 Some similarity with eukaryotic proteins YP_124798.1 Similar to malonate decarboxylase, alpha subunit YP_124799.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A YP_124800.1 Similar to malonate decarboxylase, gamma subunit YP_124801.1 Similar to phosphoribosyl-dephospho-CoA transferase YP_124802.1 Similar to 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase YP_124803.1 Similar to malonyl-CoA acyl-carrier-protein transacylase YP_124804.1 Similar to phosphatase YP_124806.1 Similar to conserved hypothetical protein YP_124808.1 membrane protein YP_124810.1 Similar to florfenicol efflux pump-like protein YP_124811.1 similar to conserved hypothetical protein YP_124812.1 Similar to conserved hypothetical protein YP_124813.1 similar to hypothetical proteins YP_124819.1 Similar to D-alanyl-D-alanine dipeptidase YP_124820.1 predicted integral membrane protein YP_124821.1 Similar to N-hydroxyarylamine O-acetyltransferase YP_124822.1 Ankyrin repeat protein YP_124825.1 Similar to unknown protein YP_124827.1 ankyrin repeat protein YP_124828.1 Similar to two-component response regulator YP_124829.1 Similar to two-component sensor histidine kinase YP_124830.1 Similar to guanylate cyclase-related protein YP_124833.1 Similar to hypothetical protein YP_124834.1 Similar to major facilitator superfamily transporters YP_124835.1 Similar to aspartyl/asparaginyl beta-hydroxylase YP_124836.1 Similar to hydrogenase 1 maturation protease YP_124837.1 Similar to coenzyme F420-reducing hydrogenase, alpha subunit YP_124838.1 Similar to coenzyme F420-reducing hydrogenase, gamma subunit YP_124839.1 Similar to 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_124840.1 Similar to hydrogenase subunit YP_124847.1 weakly similar to high-affinity nickel-transport protein NixA YP_124848.1 similar to glycosyl transferase YP_124849.1 Similar to conserved hypothetical protein YP_124850.1 Integral membrane protein, similar to metabolite efflux pump YP_124852.1 Similar to hypothetical protein YP_124853.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_124854.1 Protein with TPR motifs (protein-protein interaction motif) YP_124856.1 catalyzes the formation of dUMP from dUTP YP_124857.1 similar to DNA/pantothenate metabolism flavoprotein YP_124859.1 hypothetical gene YP_124861.1 Similar to conserved hypothetical protein YP_124862.1 similar to hypothetical Inosine-5'-monophosphate dehydrogenase YP_124863.1 Similar to alcohol dehydrogenase YP_124864.1 Similar to small heat shock protein YP_124865.1 Predicted membrane protein YP_124866.1 Similar to conserved hypothetical protein YP_124867.1 Similar to homospermidine synthase YP_124868.1 Similar to rRNA methylase YP_124869.1 Similar to thiamin pyrophosphokinase YP_124870.1 Similar to conserved hypothetical protein YP_124873.1 Similar to conserved hypothetical protein YP_124874.1 similar to carbonic anhydrase YP_124875.1 similar to multidrug resistance protein, MFS superfamily YP_124876.1 Similar to hypothetical protein YP_124879.1 similar to sensor histidine kinase/response regulator YP_124885.1 Similar to multidrug efflux pump YP_124886.1 Similar to efflux protein YP_124887.1 Similar to outer membrane efflux protein YP_124889.1 Major facilitator superfamily (MFS) transporter YP_124890.1 Similar to transcriptional regulator (Lrp family) YP_124895.1 similar to other protein YP_124898.1 weakly similar to alpha-glucosidase YP_124900.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_124901.1 similar to chorismate mutase (N-terminal part) YP_124902.1 similar to chorismate mutase (C-terminal part) YP_124903.1 Similar to aspartate aminotransferase YP_124904.1 with TehA confers resistance to tellurite YP_124905.1 similar to unknown protein YP_124906.1 similar to hemoglobin (protozoan/cyanobacterial globin family) YP_124907.1 similar to xylene monooxygenase YP_124908.1 Similar to conserved hypothetical protein YP_124911.1 Similar to large conductance mechanosensitive channel protein YP_124916.1 similar to membrane-bound lytic murein transglycosylase A YP_124918.1 hypothetical gene YP_124919.1 hypothetical gene YP_124921.1 similar to protein secretion chaperonin CsaA YP_124922.1 Predicted transmembrane protein YP_124923.1 Similar to trancriptional regulator, AraC family YP_124926.1 Similar to permeases of the drug/metabolite transporter (DMT) superfamily YP_124927.1 membrane protein YP_124928.1 Similar to hexose phosphate transport protein YP_124929.1 Similar to N-terminal part of rare lipoprotein A YP_124931.1 similar to eukaryotic serine threonin protein kinase YP_124932.1 Similar to Legionella transcriptionnal regulator YP_124933.1 Similar to conserved hypothetical protein YP_124937.1 Similar to glutaryl-CoA dehydrogenase YP_124938.1 Similar to pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_124939.1 Similar to hypothetical proteins YP_124940.1 similar to FlhB protein, part of export apparatus for flagellar proteins YP_124943.1 Similar to periplasmic dipeptidase for D-ala-D-ala dipeptidase YP_124944.1 weakly similar to cysteine protease YP_124945.1 similar to phospholipase/lecithinase/hemolysin YP_124946.1 similar to Sphingomyelin phosphodiesterase YP_124947.1 similar to D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_124948.1 similar to partition protein ParB YP_124950.1 Predicted integral membrane protein YP_124951.1 similar to rRNA methylase (sun protein) YP_124952.1 similar to methionyl-tRNA formyltransferase YP_124953.1 similar to polypeptide deformylase YP_124954.1 similar to unknown protein YP_124955.1 similar to E. coli Smf protein YP_124956.1 similar to unknown protein YP_124957.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining; maintains net negative superhelicity YP_124958.1 similar to membrane bound acyltransferase YP_124959.1 Similar to conserved hypothetical protein YP_124960.1 Similar to hypothetical protein YP_124962.1 Similar to unknown protein YP_124964.1 Similar to unknown protein YP_124965.1 Similar to peptidase YP_124966.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_124967.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_124970.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_124971.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_124972.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_124974.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_124975.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_124977.1 Similar to cell division protein YP_124978.1 similar to chromosome partition protein smc YP_124979.1 Similar to acid phosphatase, class B YP_124980.1 Weakly similar to cysteine protease YP_124981.1 Similar to hypothtical protein YP_124982.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_124985.1 Similar to conserved hypothetical protein YP_124986.1 Similar to hypothetical protein YP_124987.1 membrane protein YP_124988.1 Predicted membrane protein, similar to permease YP_124989.1 Similar to leucine aminopeptidase YP_124990.1 Similar to DNA polymerase III, chi subunit YP_124991.1 Similar to hypothetical protein YP_124992.1 Similar to aminopeptidase YP_124993.1 similar to integral membrane protein MviN YP_124994.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_125000.1 regulatory protein (GGDEF and EAL domains) YP_125002.1 similar to protein from Stx2 converting bacteriophage I YP_125003.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_125005.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_125006.1 belong to the CinA protein family YP_125007.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_125008.1 involved in the peptidyltransferase reaction during translation YP_125010.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_125011.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_125012.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_125013.1 regulatory protein (GGDEF domain) YP_125014.1 similar to octaprenyl-diphosphate synthase YP_125015.1 hypothetical gene YP_125018.1 similar to predicted ATPase YP_125019.1 similar to unknown protein YP_125020.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_125021.1 similar to pantothenate synthetases YP_125022.1 Similar to conserved hypothetical proteins YP_125023.1 biotin carboxylase; with subunit B, the carboxyltansferase/biotincarboxyl carrier subunit catalyzes the formation of oxaloacetate from pyruvate YP_125024.1 Similar to dienelactone hydrolase family protein YP_125025.1 similar to unknown protein YP_125026.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters YP_125027.1 Similar to cell division ABC transporter, permease protein FtsX YP_125028.1 Highly similar to cell division ABC transporter, ATP-binding protein FtsE YP_125029.1 Similar to C-terminal part of signal recognition particle GTPase, FtsY YP_125030.1 Similar to zinc protease YP_125031.1 Similar to zinc protease YP_125032.1 Similar to methyltransferase proteins YP_125036.1 Similar to 5'-nucleotidase, catalytic domain YP_125037.1 similar to unknown protein YP_125038.1 similar to oxidoreductase YP_125039.1 similar to D-alanine-D-alanine ligase (N-terminal part) YP_125040.1 similar to aldolase YP_125041.1 Similar to hypothetical protein YP_125043.1 similar to hypothetical protein YP_125044.1 small basic protein SbpA YP_125050.1 similar to cation transport ATPase YP_125052.1 Similar to SAM dependent methyltransferase YP_125053.1 Similar to eukaryotic phytanoyl-CoA dioxygenase YP_125054.1 similar to glycosyltransferase YP_125055.1 similar to unknown proteins YP_125056.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_125058.1 similar to N-acetylmuramoyl-L-alanine amidase YP_125059.1 similar to conserved hypothetical protein YP_125060.1 similar to conserved hypothetical protein YP_125061.1 similar to stringent starvation protein B YP_125062.1 similar to stringent starvation protein A YP_125063.1 similar to ubiquinol-cytochrome c oxydoreductase, cytochrome c1 YP_125064.1 Similar to ubiquinol--cytochrome c reductase, cytochrome b YP_125065.1 Similar to ubiquinol--cytochrome c reductase, iron-sulfur subunit YP_125066.1 forms a direct contact with the tRNA during translation YP_125067.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_125068.1 similar to ferredoxin 2fe-2s protein YP_125069.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control YP_125070.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_125071.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_125072.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_125074.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits YP_125075.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_125076.1 hypothetical gene YP_125077.1 Similar to conserved hypothetical protein YP_125079.1 hypothetical gene YP_125081.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity YP_125082.1 cAMP/cGMP binding protein YP_125083.1 Similar to unknown protein YP_125084.1 Similar to NADH-dependent flavin oxidoreductase (Oye family) YP_125085.1 Similar to transcriptional regulator, ArsR family YP_125086.1 Some simillarity with eukaryotic proteins YP_125087.1 similar to membrane protein YP_125089.1 Similar to queuine tRNA-ribosyltransferase YP_125090.1 Similar to disulfide bond formation protein DsbB YP_125091.1 Similar to cytochrome c5 YP_125092.1 similar to 2-amino-3-ketobutyrate coenzyme A ligase YP_125093.1 response regulator YP_125094.1 membrane protein YP_125095.1 Similar to signal transduction histidine kinase YP_125096.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_125098.1 Similar to uroporphyrinogen III methylase HemX YP_125100.1 Similar to cation-efflux system membrane protein YP_125101.1 Similar to conserved hypothetical protein YP_125102.1 3'-5' exoribonuclease specific for small oligoribonuclotides YP_125103.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases YP_125104.1 Similar to GTPase YP_125108.1 Similar to hypothetical protein YP_125109.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_125110.1 Similar to hypothetical protein YP_125111.1 Similar to unknown protein YP_125113.1 Similar to response regulator YP_125116.1 similar to unknown protein YP_125118.1 Similar to HIT( Histidine triad nucleotide-binding protein) family protein YP_125120.1 Similar to L-sorbosone dehydrogenase YP_125122.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_125123.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs YP_125124.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_125125.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_125126.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_125127.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_125128.1 Catalyzes the transfer of electrons from NADH to quinone YP_125133.1 Catalyzes the transfer of electrons from NADH to quinone YP_125135.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_125138.1 Catalyzes the transfer of electrons from NADH to quinone YP_125140.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_125143.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_125145.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_125149.1 Similar to predicted RNA-binding protein YP_125150.1 Similar to O-acetyltransferase YP_125152.1 Similar to phosphatidylglycerophosphate synthase YP_125153.1 Similar to DnaA, ATPase involved in DNA replication initiation YP_125154.1 Similar to coproporphyrinogen oxidase A YP_125156.1 Predicted membrane protein, similar to transporters YP_125158.1 Similar to conserved hypothetical protein YP_125159.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_125161.1 Similar to conserved hypothetical protein YP_125162.1 Similar to conserved hypothetical protein YP_125163.1 similar to unknown protein YP_125164.1 Similar to conserved hypothetical protein YP_125165.1 Similar to dihydrodipicolinate synthase YP_125166.1 Similar to hypothetical protein YP_125167.1 Similar to transcriptional regulator YP_125170.1 Similar to aminopeptidase YP_125171.1 membrane protein YP_125173.1 hypothetical gene YP_125174.1 Similar to disulfide bond chaperones of the HSP33 family YP_125175.1 Similar to hypothetical protein YP_125176.1 Similar to conserved hypothetical protein YP_125177.1 Similar to predicted oxidoreductase YP_125178.1 similar to unknown protein YP_125179.1 Similar to GTP-binding protein TypA/BipA YP_125180.1 catalyzes the phosphorylation of NAD to NADP YP_125182.1 Similar to cold shock protein CspC YP_125183.1 Similar to efflux protein YP_125184.1 similar to unknown protein YP_125185.1 Similar to conserved hypothetical protein YP_125187.1 Similar to transposase (IS21 family) YP_125188.1 Similar to transposase (IS21 family) YP_125189.1 conserved ubiquitin conjugation factor E4 family domain (U-box) YP_125192.1 Similar to acyl-CoA hydrolase YP_125193.1 Similar to transcriptional accessory protein YP_125194.1 catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide YP_125195.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_125196.1 Similar to lysophospholipase A YP_125197.1 Similar to transposase (IS4 family) YP_125198.1 similar to conserved hypothetical protein YP_125199.1 similar to unknown protein YP_125200.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_125201.1 Highly similar to bacterioferritin comigratory protein YP_125202.1 similar to efflux protein YP_125203.1 similar to PhoH protein YP_125204.1 similar to guanosine monophosphate reductase GuaC YP_125205.1 protein with repetitions YP_125206.1 similar to esterase YP_125208.1 Similar to ribonuclease YP_125209.1 similar to unknown proteins YP_125210.1 Similar to cold shock protein YP_125212.1 similar to amidase YP_125213.1 similar to unknown protein YP_125214.1 hypothetical tetratricopeptide repeat protein YP_125215.1 similar to unknwon proteins YP_125216.1 similar to unknow protein YP_125217.1 Similar to hypothetical protein YP_125218.1 similar to unknown protein YP_125219.1 Similar to MoxR-like ATPases, regulator YP_125221.1 Similar to tRNA-dihydrouridine synthase B YP_125223.1 Involved in pteridine salvage and antifolate resistance YP_125224.1 Similar to conserved hypothetical protein YP_125225.1 Similar to unknown protein YP_125227.1 similar to unknown protein YP_125229.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived YP_125230.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_125231.1 similar to predicted permeases YP_125233.1 hydrolyzes diadenosine polyphosphate YP_125234.1 Similar to L-asparaginase I YP_125242.1 Similar to electron transport complex protein rnfB YP_125243.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_125244.1 Belongs to the polyprenyl P-hydroxybenzoate / phenylacrylic acid decarboxylases family. YP_125246.1 secreted protein YP_125247.1 Highly similar to transcriptional regulator ExsB YP_125248.1 Highly similar to mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_125250.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_125251.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_125252.1 Highly similar to chromosome partitioning protein ParA family YP_125253.1 similar to chromosome partitioning protein parB YP_125254.1 Similar to hypothetical protein YP_125255.1 Similar to transposase (IS5 family) YP_125258.1 Similar to acetyltransferases YP_125259.1 hypothetical gene YP_125262.1 involved in the insertion of copper into subunit I of cytochrome C oxidase YP_125265.1 similar to cytochrome c YP_125266.1 similar to ferredoxin component of dioxygenase YP_125267.1 similar to glycosyltransferases YP_125268.1 Similar to transporter, LysE family YP_125271.1 Similar to conserved hypothetical protein YP_125273.1 similar to conserved hypothetical protein YP_125274.1 similar to P.aeruginosa probable ubiquinone biosynthesis protein ubiB YP_125279.1 this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae YP_125280.1 similar to hypothetical protein YP_125281.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine YP_125284.1 Hypothetical gene YP_125285.1 Weakly similar to acetyltransferases YP_125286.1 Weakly similar to conserved hypothetical protein YP_125288.1 Similar to acetyltransferase YP_125290.1 Highly similar to lytic murein transglycosylase YP_125291.1 similar to ABC transporter permease protein YP_125292.1 similar to ATP-binding protein of ABC transporter YP_125293.1 conserved lipoprotein YP_125294.1 Similar to outer membrane efflux protein YP_125295.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP YP_125296.1 similar to unknown protein YP_125297.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_125298.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_125299.1 Similar to Sec-independent protein translocase TatC YP_125300.1 similar to conserved hypothetical protein YP_125302.1 Similar to C-terminal part of NAD(P)H-flavin reductase YP_125303.1 Highly similar to 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_125304.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_125305.1 Highly similar to thioredoxin YP_125306.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_125307.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_125308.1 similar to unknown protein YP_125309.1 Similar to hypothetical protein YP_125312.1 similar to unknown protein YP_125314.1 similar to lipid A biosynthesis lauroyl acyltransferase YP_125315.1 similar to acyl transferase YP_125316.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_125317.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis YP_125318.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_125320.1 Similar to glycosyltransferase proteins YP_125321.1 Similar to methyltransferase YP_125322.1 similar to glycosyltransferase YP_125324.1 Highly similar to cystathionine beta-synthase YP_125327.1 Some similarity with eukaryotic proteins YP_125328.1 Highly similar to integration host factor, beta subunit YP_125329.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_125330.1 Similar to protease YP_125331.1 transmembrane protein, similar to hypothetical membrane-bound serine protease YP_125332.1 Conserved hypothetical protein YP_125333.1 Similar to major outer membrane protein precursor YP_125336.1 Similar to sodium-type flagellar protein MotY YP_125337.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_125338.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) YP_125342.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine YP_125343.1 Similar to conserved hypothetical protein YP_125344.1 Similar to glycerophosphoryl diester phosphodiesterase (ATA start codon) YP_125345.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate YP_125346.1 Similar to translation initiation protein YP_125347.1 hypothetical gene YP_125348.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine YP_125351.1 similar to protease YP_125353.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_125354.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_125355.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_125356.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_125357.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_125358.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_125359.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_125360.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_125361.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_125362.1 Similar to ATP synthase subunit i YP_125364.1 Similar to lipoproteins YP_125365.1 similar to lipoproteins YP_125366.1 similar to phosphoheptose isomerase YP_125367.1 similar to conserved hypothetical protein YP_125368.1 conserved hypothetical protein, lipoprotein YP_125369.1 conserved hypothetical protein, methyltransferase YP_125370.1 similar to alkane monooxygenase YP_125371.1 Similar to sulfate permease and related transporters (MFS superfamily) with a C-terminal cAMP binding motif. YP_125373.1 Similar to eukaryotic zinc metalloproteinase YP_125375.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_125376.1 inner membrane protein YP_125377.1 Similar to conserved hypothetical protein YP_125378.1 similar to ribonuclease P protein component (RNase P) YP_125379.1 in Escherichia coli transcription of this gene is enhanced by polyamines