-- dump date 20120504_152607 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 857087000001 SEQ_END SEQ_END NC_015572.1 5051681 5051681 DR NC_015572.1; contig end 5051681..5051681 Methylomonas methanica MC09 YP_004510958.1 CDS Metme_0001 NC_015572.1 66 1382 D SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: mca:MCA3033 chromosomal replication initiator protein DnaA; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; chromosome replication initiator DnaA 66..1382 Methylomonas methanica MC09 10674642 YP_004510959.1 CDS Metme_0002 NC_015572.1 1571 2674 D SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: mca:MCA3032 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 1571..2674 Methylomonas methanica MC09 10669979 YP_004510960.1 CDS Metme_0003 NC_015572.1 2684 3757 D TIGRFAM: DNA-binding, RecF; HAMAP: DNA replication and repair protein recF; KEGG: pmy:Pmen_0003 recombination protein F; PFAM: RecF/RecN/SMC protein, N-terminal; DNA replication and repair protein RecF 2684..3757 Methylomonas methanica MC09 10669980 YP_004510961.1 CDS Metme_0004 NC_015572.1 3870 6275 D SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA gyrase, subunit B; KEGG: mca:MCA3030 DNA gyrase, B subunit; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; DNA gyrase subunit B 3870..6275 Methylomonas methanica MC09 10669981 YP_004510962.1 CDS Metme_0005 NC_015572.1 6974 7948 D KEGG: oan:Oant_1158 hypothetical protein; hypothetical protein 6974..7948 Methylomonas methanica MC09 10669982 YP_004510963.1 CDS Metme_0006 NC_015572.1 7945 9084 D KEGG: bch:Bcen2424_0193 hypothetical protein; hypothetical protein 7945..9084 Methylomonas methanica MC09 10669983 YP_004510964.1 CDS Metme_0007 NC_015572.1 9088 9789 D KEGG: azl:AZL_d03810 hypothetical protein; hypothetical protein 9088..9789 Methylomonas methanica MC09 10669984 YP_004510965.1 CDS Metme_0008 NC_015572.1 10025 10264 R manually curated; PFAM: Helix-turn-helix type 3; KEGG: helix-turn-helix domain-containing protein; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(10025..10264) Methylomonas methanica MC09 10669985 YP_004510966.1 CDS Metme_0009 NC_015572.1 10306 11538 D KEGG: swd:Swoo_0415 hypothetical protein; hypothetical protein 10306..11538 Methylomonas methanica MC09 10669986 YP_004510967.1 CDS Metme_0010 NC_015572.1 12234 12656 D manually curated; PFAM: Helix-turn-helix type 3; KEGG: mes:Meso_3488 XRE family transcriptional regulator; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 12234..12656 Methylomonas methanica MC09 10669987 YP_004510968.1 CDS Metme_0011 NC_015572.1 12903 13625 D PFAM: TnsA endonuclease, N-terminal; KEGG: bgf:BC1003_0016 hypothetical protein; TnsA endonuclease 12903..13625 Methylomonas methanica MC09 10669988 YP_004510969.1 CDS Metme_0012 NC_015572.1 13588 15576 D PFAM: Integrase, catalytic core; KEGG: bgf:BC1003_0017 integrase catalytic region; integrase catalytic subunit 13588..15576 Methylomonas methanica MC09 10669989 YP_004510970.1 CDS Metme_0013 NC_015572.1 15590 16564 D KEGG: bgf:BC1003_0018 TniB family protein; PFAM: Bacterial TniB; SMART: ATPase, AAA+ type, core; TniB family protein 15590..16564 Methylomonas methanica MC09 10669990 YP_004510971.1 CDS Metme_0014 NC_015572.1 16558 17946 D KEGG: bgf:BC1003_0019 hypothetical protein; hypothetical protein 16558..17946 Methylomonas methanica MC09 10669991 YP_004510972.1 CDS Metme_0015 NC_015572.1 18009 19730 D PFAM: HTH transcriptional regulator, MerR; KEGG: bgf:BC1003_0019 hypothetical protein; regulatory protein MerR 18009..19730 Methylomonas methanica MC09 10669992 YP_004510973.1 CDS Metme_0016 NC_015572.1 20488 21054 D hypothetical protein 20488..21054 Methylomonas methanica MC09 10669993 YP_004510974.1 CDS Metme_0017 NC_015572.1 21162 23765 D KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein 21162..23765 Methylomonas methanica MC09 10669994 YP_004510975.1 CDS Metme_0018 NC_015572.1 23785 25263 D hypothetical protein 23785..25263 Methylomonas methanica MC09 10669995 YP_004510976.1 CDS Metme_0019 NC_015572.1 25267 25461 D hypothetical protein 25267..25461 Methylomonas methanica MC09 10669996 YP_004510977.1 CDS Metme_0020 NC_015572.1 25448 25957 D KEGG: hmu:Hmuk_1370 hypothetical protein; hypothetical protein 25448..25957 Methylomonas methanica MC09 10669997 YP_004510978.1 CDS Metme_0021 NC_015572.1 25966 27681 D PFAM: NUDIX hydrolase domain; KEGG: hch:HCH_05717 hypothetical protein; NUDIX hydrolase 25966..27681 Methylomonas methanica MC09 10669998 YP_004510979.1 CDS Metme_0022 NC_015572.1 27772 28452 D PFAM: Curli production assembly/transport component CsgG; KEGG: acp:A2cp1_0420 curli production assembly/transport component CsgG; curli production protein CsgG 27772..28452 Methylomonas methanica MC09 10669999 YP_004510980.1 CDS Metme_0023 NC_015572.1 28478 28903 D KEGG: ade:Adeh_0393 hypothetical protein; hypothetical protein 28478..28903 Methylomonas methanica MC09 10670000 YP_004510981.1 CDS Metme_0024 NC_015572.1 28900 29526 D PFAM: Protein of unknown function DUF799; KEGG: acp:A2cp1_0423 protein of unknown function DUF799; hypothetical protein 28900..29526 Methylomonas methanica MC09 10670001 YP_004510982.1 CDS Metme_0026 NC_015572.1 29861 30109 R PFAM: Transcription regulator AbrB/SpoV, predicted; KEGG: dma:DMR_11750 PemI-like protein 1; transcriptional regulator/antitoxin MazE complement(29861..30109) Methylomonas methanica MC09 10670003 YP_004510983.1 CDS Metme_0028 NC_015572.1 30457 30699 R KEGG: vei:Veis_4993 hypothetical protein; hypothetical protein complement(30457..30699) Methylomonas methanica MC09 10670005 YP_004510984.1 CDS Metme_0030 NC_015572.1 31139 31831 R KEGG: mmw:Mmwyl1_4196 transcriptional regulator; hypothetical protein complement(31139..31831) Methylomonas methanica MC09 10670007 YP_004510985.1 CDS Metme_0031 NC_015572.1 32043 33458 D KEGG: hypothetical protein; hypothetical protein 32043..33458 Methylomonas methanica MC09 10670008 YP_004510986.1 CDS Metme_0032 NC_015572.1 33460 34098 D KEGG: hypothetical protein; hypothetical protein 33460..34098 Methylomonas methanica MC09 10670009 YP_004510987.1 CDS Metme_0033 NC_015572.1 34095 37475 D KEGG: hypothetical protein; hypothetical protein 34095..37475 Methylomonas methanica MC09 10670010 YP_004510988.1 CDS Metme_0034 NC_015572.1 37488 38702 D KEGG: cja:CJA_1537 hypothetical protein; hypothetical protein 37488..38702 Methylomonas methanica MC09 10670011 YP_004510989.1 CDS Metme_0035 NC_015572.1 38680 38898 R hypothetical protein complement(38680..38898) Methylomonas methanica MC09 10670012 YP_004510990.1 CDS Metme_0036 NC_015572.1 39217 39615 D KEGG: pct:PC1_0653 hypothetical protein; hypothetical protein 39217..39615 Methylomonas methanica MC09 10670013 YP_004510991.1 CDS Metme_0037 NC_015572.1 39616 40110 D KEGG: hypothetical protein; hypothetical protein 39616..40110 Methylomonas methanica MC09 10670014 YP_004510992.1 CDS Metme_0038 NC_015572.1 40303 40632 D KEGG: bgf:BC1003_0015 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 40303..40632 Methylomonas methanica MC09 10670015 YP_004510993.1 CDS Metme_0039 NC_015572.1 40601 41671 R KEGG: bpt:Bpet3736 transposase; transposase complement(40601..41671) Methylomonas methanica MC09 10670016 YP_004510994.1 CDS Metme_0040 NC_015572.1 41988 42770 D PFAM: TnsA endonuclease, N-terminal; KEGG: bgf:BC1003_0016 hypothetical protein; TnsA endonuclease 41988..42770 Methylomonas methanica MC09 10670017 YP_004510995.1 CDS Metme_0041 NC_015572.1 42763 44643 D PFAM: Integrase, catalytic core; Transposase-like, Mu, C-terminal; KEGG: bgf:BC1003_0017 integrase catalytic region; integrase catalytic subunit 42763..44643 Methylomonas methanica MC09 10670018 YP_004510996.1 CDS Metme_0042 NC_015572.1 44636 45610 D KEGG: bgf:BC1003_0018 TniB family protein; PFAM: Bacterial TniB; SMART: ATPase, AAA+ type, core; TniB family protein 44636..45610 Methylomonas methanica MC09 10670019 YP_004510997.1 CDS Metme_0043 NC_015572.1 45607 47463 D KEGG: bgf:BC1003_0019 hypothetical protein; hypothetical protein 45607..47463 Methylomonas methanica MC09 10670020 YP_004510998.1 CDS Metme_0044 NC_015572.1 47805 47927 D hypothetical protein 47805..47927 Methylomonas methanica MC09 10670021 YP_004510999.1 CDS Metme_0045 NC_015572.1 48634 50133 D PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cvi:CV_0127 cytidine deaminase; CMP/dCMP deaminase zinc-binding protein 48634..50133 Methylomonas methanica MC09 10670022 YP_004511000.1 CDS Metme_0046 NC_015572.1 50130 50315 D hypothetical protein 50130..50315 Methylomonas methanica MC09 10670023 YP_004511001.1 CDS Metme_0047 NC_015572.1 50427 51263 D KEGG: sma:SAV_4464 deoxycytidine triphosphate deaminase; hypothetical protein 50427..51263 Methylomonas methanica MC09 10670024 YP_004511002.1 CDS Metme_0048 NC_015572.1 51272 52078 D PFAM: Thymidylate synthase ThyX; TIGRFAM: Thymidylate synthase ThyX; HAMAP: Thymidylate synthase thyX; KEGG: svi:Svir_25280 FAD-dependent thymidylate synthase; thymidylate synthase 51272..52078 Methylomonas methanica MC09 10670025 YP_004511003.1 CDS Metme_0049 NC_015572.1 52075 53007 D PFAM: Carbohydrate/purine kinase; KEGG: mem:Memar_0859 ribokinase-like domain-containing protein; PfkB domain-containing protein 52075..53007 Methylomonas methanica MC09 10670026 YP_004511004.1 CDS Metme_0050 NC_015572.1 53573 53701 R hypothetical protein complement(53573..53701) Methylomonas methanica MC09 10670027 YP_004511005.1 CDS Metme_0051 NC_015572.1 53722 54885 D KEGG: slt:Slit_0086 hypothetical protein; hypothetical protein 53722..54885 Methylomonas methanica MC09 10670028 YP_004511006.1 CDS Metme_0052 NC_015572.1 55103 55255 D hypothetical protein 55103..55255 Methylomonas methanica MC09 10670029 YP_004511007.1 CDS Metme_0053 NC_015572.1 55459 55758 D KEGG: xac:XAC2177 hypothetical protein; hypothetical protein 55459..55758 Methylomonas methanica MC09 10670030 YP_004511008.1 CDS Metme_0055 NC_015572.1 56727 57311 D KEGG: sal:Sala_0429 hypothetical protein; hypothetical protein 56727..57311 Methylomonas methanica MC09 10670032 YP_004511009.1 CDS Metme_0056 NC_015572.1 57315 58498 R KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(join(57315..58235,58235..58498)) Methylomonas methanica MC09 10670033 YP_004511010.1 CDS Metme_0057 NC_015572.1 58634 60589 D KEGG: sal:Sala_0430 hypothetical protein; hypothetical protein 58634..60589 Methylomonas methanica MC09 10670034 YP_004511011.1 CDS Metme_0058 NC_015572.1 60583 62151 D KEGG: pna:Pnap_1740 transposase; hypothetical protein 60583..62151 Methylomonas methanica MC09 10670035 YP_004511012.1 CDS Metme_0059 NC_015572.1 62148 63230 D PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit 62148..63230 Methylomonas methanica MC09 10670036 YP_004511013.1 CDS Metme_0061 NC_015572.1 64440 65069 D PFAM: Phosphoglycerate mutase; KEGG: dno:DNO_1344 phosphoglycerate mutase; phosphoglycerate mutase 64440..65069 Methylomonas methanica MC09 10670038 YP_004511014.1 CDS Metme_0062 NC_015572.1 65597 69757 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; GAF; PAS fold-4; PAS fold; KEGG: dar:Daro_3445 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; PAC motif; PAS; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 65597..69757 Methylomonas methanica MC09 10670039 YP_004511015.1 CDS Metme_0063 NC_015572.1 70137 70553 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vha:VIBHAR_06892 methylmalonyl CoA epimerase; glyoxalase/bleomycin resistance protein/dioxygenase 70137..70553 Methylomonas methanica MC09 10670040 YP_004511016.1 CDS Metme_0064 NC_015572.1 70893 71405 D KEGG: slo:Shew_3184 hypothetical protein; hypothetical protein 70893..71405 Methylomonas methanica MC09 10670041 YP_004511017.1 CDS Metme_0065 NC_015572.1 71746 72168 D KEGG: dba:Dbac_1033 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria; transport-associated protein 71746..72168 Methylomonas methanica MC09 10670042 YP_004511018.1 CDS Metme_0066 NC_015572.1 72251 73150 D KEGG: meh:M301_0039 transglutaminase domain protein; PFAM: Transglutaminase-like; Bacterial transglutaminase-like, N-terminal; SMART: Transglutaminase-like; transglutaminase domain-containing protein 72251..73150 Methylomonas methanica MC09 10670043 YP_004511019.1 CDS Metme_0067 NC_015572.1 73200 73907 R PFAM: Cyclic nucleotide-binding; KEGG: pna:Pnap_1316 cyclic nucleotide-binding domain-containing protein; Crp/Fnr family transcriptional regulator complement(73200..73907) Methylomonas methanica MC09 10670044 YP_004511020.1 CDS Metme_0068 NC_015572.1 74331 74672 D hypothetical protein 74331..74672 Methylomonas methanica MC09 10670045 YP_004511021.1 CDS Metme_0069 NC_015572.1 74908 75057 R hypothetical protein complement(74908..75057) Methylomonas methanica MC09 10670046 YP_004511022.1 CDS Metme_0070 NC_015572.1 75090 75665 R KEGG: mxa:MXAN_3732 hypothetical protein; hypothetical protein complement(75090..75665) Methylomonas methanica MC09 10670047 YP_004511023.1 CDS Metme_0071 NC_015572.1 75684 76049 R KEGG: slt:Slit_0674 transmembrane protein; transmembrane protein complement(75684..76049) Methylomonas methanica MC09 10670048 YP_004511024.1 CDS Metme_0072 NC_015572.1 76543 77010 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: csh:Closa_1075 cytidine deaminase; CMP/dCMP deaminase zinc-binding protein complement(76543..77010) Methylomonas methanica MC09 10670049 YP_004511025.1 CDS Metme_0073 NC_015572.1 77016 77867 R PFAM: Radical SAM; KEGG: pth:PTH_0594 Fe-S oxidoreductases; radical SAM protein complement(77016..77867) Methylomonas methanica MC09 10670050 YP_004511026.1 CDS Metme_0074 NC_015572.1 77860 78843 R hypothetical protein complement(77860..78843) Methylomonas methanica MC09 10670051 YP_004511027.1 CDS Metme_0075 NC_015572.1 78868 80142 R hypothetical protein complement(78868..80142) Methylomonas methanica MC09 10670052 YP_004511028.1 CDS Metme_0076 NC_015572.1 80787 81200 R PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: mca:MCA0499 hypothetical protein; glutathione-dependent formaldehyde-activating GFA complement(80787..81200) Methylomonas methanica MC09 10670053 YP_004511029.1 CDS Metme_0077 NC_015572.1 81245 82036 R KEGG: bgf:BC1003_1383 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(81245..82036) Methylomonas methanica MC09 10670054 YP_004511030.1 CDS Metme_0078 NC_015572.1 82122 83204 R KEGG: syp:SYNPCC7002_A2445 oxidoreductase, FAD/FMN-binding protein; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; 12-oxophytodienoate reductase complement(82122..83204) Methylomonas methanica MC09 10670055 YP_004511031.1 CDS Metme_0079 NC_015572.1 83335 84147 R PFAM: NUDIX hydrolase domain; KEGG: pmr:PMI2395 NUDIX-family hydrolase; NUDIX hydrolase complement(83335..84147) Methylomonas methanica MC09 10670056 YP_004511032.1 CDS Metme_0080 NC_015572.1 84209 85234 D PFAM: Band 7 protein; KEGG: pmr:PMI2396 hypothetical protein; hypothetical protein 84209..85234 Methylomonas methanica MC09 10670057 YP_004511033.1 CDS Metme_0081 NC_015572.1 85231 86154 D KEGG: pmr:PMI2397 hypothetical protein; hypothetical protein 85231..86154 Methylomonas methanica MC09 10670058 YP_004511034.1 CDS Metme_0082 NC_015572.1 86160 86798 R PFAM: GCN5-related N-acetyltransferase; KEGG: app:CAP2UW1_2360 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(86160..86798) Methylomonas methanica MC09 10670059 YP_004511035.1 CDS Metme_0083 NC_015572.1 86828 86995 R hypothetical protein complement(86828..86995) Methylomonas methanica MC09 10670060 YP_004511036.1 CDS Metme_0084 NC_015572.1 87019 87471 R KEGG: nde:NIDE1068 acetyltransferase, GNaT family; manually curated; PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(87019..87471) Methylomonas methanica MC09 10670061 YP_004511037.1 CDS Metme_0085 NC_015572.1 87601 89112 D PFAM: Transposase, IS4-like; KEGG: mac:MA1045 transposase; transposase IS4 family protein 87601..89112 Methylomonas methanica MC09 10670062 YP_004511038.1 CDS Metme_0086 NC_015572.1 89305 89934 R PFAM: Negative transcriptional regulator; KEGG: dar:Daro_0091 negative transcriptional regulator; FMN-binding negative transcriptional regulator complement(89305..89934) Methylomonas methanica MC09 10670063 YP_004511039.1 CDS Metme_0088 NC_015572.1 90469 90792 R PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: mca:MCA2470 ferredoxin, 4Fe-4S; 4Fe-4S ferredoxin complement(90469..90792) Methylomonas methanica MC09 10670065 YP_004511040.1 CDS Metme_0089 NC_015572.1 90947 93052 R KEGG: mca:MCA0544 elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; translation elongation factor G complement(90947..93052) Methylomonas methanica MC09 10670066 YP_004511041.1 CDS Metme_0090 NC_015572.1 93196 94128 R TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: mca:MCA2523 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; 2-dehydropantoate 2-reductase complement(93196..94128) Methylomonas methanica MC09 10670067 YP_004511042.1 CDS Metme_0091 NC_015572.1 94125 94817 R KEGG: mca:MCA2522 DnaA domain-containing protein; TIGRFAM: Chromosomal replication control, regulator Hda; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); chromosome replication initiator DnaA complement(94125..94817) Methylomonas methanica MC09 10670068 YP_004511043.1 CDS Metme_0092 NC_015572.1 94829 95173 R PFAM: Protein of unknown function DUF2069, membrane; KEGG: tgr:Tgr7_2248 transmembrane protein; hypothetical protein complement(94829..95173) Methylomonas methanica MC09 10670069 YP_004511044.1 CDS Metme_0094 NC_015572.1 95667 96314 R KEGG: neu:NE0806 hypothetical protein; hypothetical protein complement(95667..96314) Methylomonas methanica MC09 10670071 YP_004511045.1 CDS Metme_0095 NC_015572.1 96546 96791 D hypothetical protein 96546..96791 Methylomonas methanica MC09 10670072 YP_004511046.1 CDS Metme_0096 NC_015572.1 97130 98497 R TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; KEGG: psa:PST_3678 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(97130..98497) Methylomonas methanica MC09 10670073 YP_004511047.1 CDS Metme_0097 NC_015572.1 98494 99036 R PFAM: Ankyrin repeat; KEGG: spu:765588 similar to ankyrin 2,3/unc44; ankyrin complement(98494..99036) Methylomonas methanica MC09 10670074 YP_004511048.1 CDS Metme_0098 NC_015572.1 99104 99481 D KEGG: tgr:Tgr7_2722 ApaG domain protein; HAMAP: Protein ApaG; PFAM: ApaG; protein ApaG 99104..99481 Methylomonas methanica MC09 10670075 YP_004511049.1 CDS Metme_0099 NC_015572.1 99481 100305 D PFAM: Metallophosphoesterase; TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: mca:MCA0159 diadenosine tetraphosphatase; HAMAP: Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; bis(5'-nucleosyl)-tetraphosphatase 99481..100305 Methylomonas methanica MC09 10670076 YP_004511050.1 CDS Metme_0100 NC_015572.1 100762 101163 D KEGG: nhl:Nhal_0644 hypothetical protein; hypothetical protein 100762..101163 Methylomonas methanica MC09 10670077 YP_004511051.1 CDS Metme_0101 NC_015572.1 101200 101895 D PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: cat:CA2559_08396 OmpA/MotB; OmpA/MotB domain-containing protein 101200..101895 Methylomonas methanica MC09 10670078 YP_004511052.1 CDS Metme_0102 NC_015572.1 102329 102880 D KEGG: mpt:Mpe_A2627 formaldehyde-activating enzyme; TIGRFAM: Formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme; formaldehyde-activating enzyme 102329..102880 Methylomonas methanica MC09 10670079 YP_004511053.1 CDS Metme_0103 NC_015572.1 102930 104624 R KEGG: mca:MCA3087 hypothetical protein; hypothetical protein complement(102930..104624) Methylomonas methanica MC09 10670080 YP_004511054.1 CDS Metme_0104 NC_015572.1 104696 106132 R KEGG: cpi:Cpin_5361 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(104696..106132) Methylomonas methanica MC09 10670081 YP_004511055.1 CDS Metme_0105 NC_015572.1 106139 109297 R KEGG: lby:Lbys_2566 transporter, hydrophobe/amphiphile efflux-1 (hae1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(106139..109297) Methylomonas methanica MC09 10670082 YP_004511056.1 CDS Metme_0106 NC_015572.1 109312 110424 R KEGG: lby:Lbys_2567 efflux transporter, rnd family, mfp subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(109312..110424) Methylomonas methanica MC09 10670083 YP_004511057.1 CDS Metme_0107 NC_015572.1 110421 110780 R hypothetical protein complement(110421..110780) Methylomonas methanica MC09 10670084 YP_004511058.1 CDS Metme_0108 NC_015572.1 110971 112785 R KEGG: mca:MCA3086 TPR domain-containing protein; PFAM: Tetratricopeptide TPR-1; von Willebrand factor, type A; SMART: von Willebrand factor, type A; Tetratricopeptide repeat; hypothetical protein complement(110971..112785) Methylomonas methanica MC09 10670085 YP_004511059.1 CDS Metme_0109 NC_015572.1 112785 113771 R KEGG: mca:MCA3085 BatB protein, PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A complement(112785..113771) Methylomonas methanica MC09 10670086 YP_004511060.1 CDS Metme_0110 NC_015572.1 113768 114232 R KEGG: gpb:HDN1F_30440 hypothetical protein; hypothetical protein complement(113768..114232) Methylomonas methanica MC09 10670087 YP_004511061.1 CDS Metme_0111 NC_015572.1 114240 118298 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; CHASE; MASE1; PAS fold-4; PAS fold; KEGG: dar:Daro_3990 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase complement(114240..118298) Methylomonas methanica MC09 10670088 YP_004511062.1 CDS Metme_0112 NC_015572.1 118379 119290 R PFAM: Protein of unknown function DUF58; KEGG: mca:MCA3083 hypothetical protein; hypothetical protein complement(118379..119290) Methylomonas methanica MC09 10670089 YP_004511063.1 CDS Metme_0113 NC_015572.1 119294 119770 R PFAM: CreA; KEGG: app:CAP2UW1_0671 CreA family protein; CreA family protein complement(119294..119770) Methylomonas methanica MC09 10670090 YP_004511064.1 CDS Metme_0114 NC_015572.1 119844 120911 R PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: mca:MCA2741 hypothetical protein; ATPase complement(119844..120911) Methylomonas methanica MC09 10670091 YP_004511065.1 CDS Metme_0115 NC_015572.1 120872 121588 R KEGG: sse:Ssed_2426 lysine decarboxylase; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730; hypothetical protein complement(120872..121588) Methylomonas methanica MC09 10670092 YP_004511066.1 CDS Metme_0116 NC_015572.1 121706 122992 R KEGG: mca:MCA2332 dihydroorotase; TIGRFAM: Dihydroorotase multifunctional complex type; PFAM: Amidohydrolase 3; dihydroorotase, multifunctional complex type complement(121706..122992) Methylomonas methanica MC09 10670093 YP_004511067.1 CDS Metme_0117 NC_015572.1 122989 123954 R PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: mca:MCA2333 aspartate carbamoyltransferase catalytic subunit; aspartate carbamoyltransferase complement(122989..123954) Methylomonas methanica MC09 10670094 YP_004511068.1 CDS Metme_0118 NC_015572.1 123957 124475 R KEGG: mca:MCA2334 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; uracil phosphoribosyltransferase complement(123957..124475) Methylomonas methanica MC09 10670095 YP_004511069.1 CDS Metme_0119 NC_015572.1 124923 125288 D KEGG: eba:ebA5923 hypothetical protein; hypothetical protein 124923..125288 Methylomonas methanica MC09 10670096 YP_004511070.1 CDS Metme_0120 NC_015572.1 125297 125632 D KEGG: cti:pRALTA_0111 hypothetical protein; hypothetical protein 125297..125632 Methylomonas methanica MC09 10670097 YP_004511071.1 CDS Metme_0121 NC_015572.1 125797 126843 D KEGG: amr:AM1_1038 transposase IS66; hypothetical protein 125797..126843 Methylomonas methanica MC09 10670098 YP_004511072.1 CDS Metme_0122 NC_015572.1 126849 127928 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRA2371 transposase; integrase catalytic subunit complement(126849..127928) Methylomonas methanica MC09 10670099 YP_004511073.1 CDS Metme_0123 NC_015572.1 127925 128425 R PFAM: Transposase IS3/IS911; KEGG: pna:Pnap_1740 transposase; transposase IS3/IS911 family protein complement(127925..128425) Methylomonas methanica MC09 10670100 YP_004511074.1 CDS Metme_0124 NC_015572.1 128689 130233 D KEGG: sus:Acid_6003 transposase IS66; transposase IS66 128689..130233 Methylomonas methanica MC09 10670101 YP_004511075.1 CDS Metme_0125 NC_015572.1 130496 130981 R SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: mca:MCA2335 hypothetical protein; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase complement(130496..130981) Methylomonas methanica MC09 10670102 YP_004511076.1 CDS Metme_0126 NC_015572.1 130974 131540 R KEGG: aeh:Mlg_0349 hypothetical protein; HAMAP: Protein of unknown function DUF179; PFAM: Protein of unknown function DUF179; hypothetical protein complement(130974..131540) Methylomonas methanica MC09 10670103 YP_004511077.1 CDS Metme_0127 NC_015572.1 131558 132451 R TIGRFAM: TonB, C-terminal; KEGG: mca:MCA2337 TonB-dependent receptor; TonB family protein complement(131558..132451) Methylomonas methanica MC09 10670104 YP_004511078.1 CDS Metme_0128 NC_015572.1 132457 133413 R PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: mca:MCA2338 glutathione synthetase; glutathione synthetase complement(132457..133413) Methylomonas methanica MC09 10670105 YP_004511079.1 CDS Metme_0129 NC_015572.1 133553 133789 D TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: tgr:Tgr7_0325 ribosomal protein L28; PFAM: Ribosomal protein L28; 50S ribosomal protein L28 133553..133789 Methylomonas methanica MC09 10670106 YP_004511080.1 CDS Metme_0130 NC_015572.1 133801 133956 D TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: mca:MCA2340 50S ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 133801..133956 Methylomonas methanica MC09 10670107 YP_004511081.1 CDS Metme_0131 NC_015572.1 134023 135351 R KEGG: pmy:Pmen_2946 cyclic nucleotide-binding protein; PFAM: Rhodanese-like; Cyclic nucleotide-binding; SMART: Rhodanese-like; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(134023..135351) Methylomonas methanica MC09 10670108 YP_004511082.1 CDS Metme_0132 NC_015572.1 135491 136840 D SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: mca:MCA2343 protease DO; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; protease Do 135491..136840 Methylomonas methanica MC09 10670109 YP_004511083.1 CDS Metme_0133 NC_015572.1 136904 138988 R TIGRFAM: PAS; PFAM: GAF; PAS fold; KEGG: slt:Slit_2804 diguanylate cyclase with PAS/PAC sensor; SMART: PAS; PAC motif; PAS/PAC sensor protein complement(136904..138988) Methylomonas methanica MC09 10670110 YP_004511084.1 CDS Metme_0134 NC_015572.1 139181 141187 R KEGG: mca:MCA2140 ATP-dependent DNA helicase Rep; TIGRFAM: DNA helicase, ATP-dependent, RepA type; PFAM: DNA helicase, UvrD/REP type; ATP-dependent DNA helicase Rep complement(139181..141187) Methylomonas methanica MC09 10670111 YP_004511085.1 CDS Metme_0135 NC_015572.1 141296 141445 D hypothetical protein 141296..141445 Methylomonas methanica MC09 10670112 YP_004511086.1 CDS Metme_0136 NC_015572.1 141453 141932 R PFAM: Peptidase A8, signal peptidase II; TIGRFAM: Peptidase A8, signal peptidase II; HAMAP: Peptidase A8, signal peptidase II; KEGG: mca:MCA2254 signal peptidase II; lipoprotein signal peptidase complement(141453..141932) Methylomonas methanica MC09 10670113 YP_004511087.1 CDS Metme_0137 NC_015572.1 141925 144756 R TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: mca:MCA2253 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(141925..144756) Methylomonas methanica MC09 10670114 YP_004511088.1 CDS Metme_0138 NC_015572.1 145012 145599 D KEGG: syr:SynRCC307_1985 hypothetical protein; hypothetical protein 145012..145599 Methylomonas methanica MC09 10670115 YP_004511089.1 CDS Metme_0139 NC_015572.1 145596 146432 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mca:MCA2186 short chain dehydrogenase/reductase oxidoreductase; short-chain dehydrogenase/reductase SDR 145596..146432 Methylomonas methanica MC09 10670116 YP_004511090.1 CDS Metme_0140 NC_015572.1 146590 146976 D hypothetical protein 146590..146976 Methylomonas methanica MC09 10670117 YP_004511091.1 CDS Metme_0141 NC_015572.1 147053 147877 R KEGG: wch:wcw_0149 hypothetical protein; hypothetical protein complement(147053..147877) Methylomonas methanica MC09 10670118 YP_004511092.1 CDS Metme_0142 NC_015572.1 147951 150584 R PFAM: Uncharacterised protein family UPF0182; KEGG: mca:MCA2716 hypothetical protein; hypothetical protein complement(147951..150584) Methylomonas methanica MC09 10670119 YP_004511093.1 CDS Metme_0143 NC_015572.1 150820 152520 D PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: neu:NE0782 periplasmic cell division protein (SufI); multicopper oxidase type 3 150820..152520 Methylomonas methanica MC09 10670120 YP_004511094.1 CDS Metme_0144 NC_015572.1 152616 154337 R PFAM: Multicopper oxidase, type 2; KEGG: mca:MCA2129 multicopper oxidase; multicopper oxidase type 2 complement(152616..154337) Methylomonas methanica MC09 10670121 YP_004511095.1 CDS Metme_0145 NC_015572.1 154576 156279 D KEGG: mag:amb2567 exo-beta-1,3-glucanase; exo-beta-1,3-glucanase 154576..156279 Methylomonas methanica MC09 10670122 YP_004511096.1 CDS Metme_0146 NC_015572.1 156491 157177 D hypothetical protein 156491..157177 Methylomonas methanica MC09 10670123 YP_004511097.1 CDS Metme_0147 NC_015572.1 157189 158505 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: pfl:PFL_0087 diguanylate cyclase, SMART: Diguanylate cyclase, predicted; diguanylate cyclase complement(157189..158505) Methylomonas methanica MC09 10670124 YP_004511098.1 CDS Metme_0148 NC_015572.1 158517 160043 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: hch:HCH_00302 response regulator; SMART: Diguanylate cyclase, predicted; diguanylate cyclase complement(158517..160043) Methylomonas methanica MC09 10670125 YP_004511099.1 CDS Metme_0149 NC_015572.1 160157 160762 R PFAM: DSBA oxidoreductase; KEGG: mca:MCA2602 thiol:disulfide interchange protein DsbA; DSBA oxidoreductase complement(160157..160762) Methylomonas methanica MC09 10670126 YP_004511100.1 CDS Metme_0151 NC_015572.1 161285 161968 R PFAM: Cytochrome c, class I; KEGG: mca:MCA2603 cytochrome c family protein; cytochrome c class I complement(161285..161968) Methylomonas methanica MC09 10670128 YP_004511101.1 CDS Metme_0152 NC_015572.1 162078 162686 D TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: aeh:Mlg_2857 cell division checkpoint GTPase YihA; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engB 162078..162686 Methylomonas methanica MC09 10670129 YP_004511102.1 CDS Metme_0153 NC_015572.1 162764 163204 R hypothetical protein complement(162764..163204) Methylomonas methanica MC09 10670130 YP_004511103.1 CDS Metme_0154 NC_015572.1 163593 164162 R SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: hch:HCH_06724 iron-regulated protein; prolyl 4-hydroxylase subunit alpha complement(163593..164162) Methylomonas methanica MC09 10670131 YP_004511104.1 CDS Metme_0155 NC_015572.1 164384 164971 R KEGG: eba:ebA5197 cytochrome c family protein; cytochrome c family protein complement(164384..164971) Methylomonas methanica MC09 10670132 YP_004511105.1 CDS Metme_0156 NC_015572.1 165073 165987 D HAMAP: Coproporphyrinogen-III oxidase, aerobic; KEGG: mca:MCA2791 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase; coproporphyrinogen-III oxidase, aerobic 165073..165987 Methylomonas methanica MC09 10670133 YP_004511106.1 CDS Metme_0157 NC_015572.1 166114 168291 D PFAM: Zeta toxin; Zeta toxin family protein 166114..168291 Methylomonas methanica MC09 10670134 YP_004511107.1 CDS Metme_0158 NC_015572.1 168466 169059 D KEGG: pcu:pc0939 hypothetical protein; hypothetical protein 168466..169059 Methylomonas methanica MC09 10670135 YP_004511108.1 CDS Metme_0159 NC_015572.1 169153 171417 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; PAS; PAC motif; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(169153..171417) Methylomonas methanica MC09 10670136 YP_004511109.1 CDS Metme_0160 NC_015572.1 171642 172529 R KEGG: rfr:Rfer_1985 beta-lactamase-like; beta-lactamase-like protein complement(171642..172529) Methylomonas methanica MC09 10670137 YP_004511110.1 CDS Metme_0161 NC_015572.1 172542 173384 R PFAM: Metal-dependent hydrolase HDOD; KEGG: rfr:Rfer_1986 metal dependent phosphohydrolase; signal transduction protein complement(172542..173384) Methylomonas methanica MC09 10670138 YP_004511111.1 CDS Metme_0162 NC_015572.1 173401 176157 R TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: mca:MCA2573 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain; DNA polymerase I complement(173401..176157) Methylomonas methanica MC09 10670139 YP_004511112.1 CDS Metme_0163 NC_015572.1 176363 177370 D hypothetical protein 176363..177370 Methylomonas methanica MC09 10670140 YP_004511113.1 CDS Metme_0164 NC_015572.1 177825 178490 D PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; Transcriptional regulator, YbiH, C-terminal; KEGG: mms:mma_0049 TetR family transcriptional regulator; TetR family transcriptional regulator 177825..178490 Methylomonas methanica MC09 10670141 YP_004511114.1 CDS Metme_0165 NC_015572.1 178483 180027 D KEGG: aav:Aave_4662 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 178483..180027 Methylomonas methanica MC09 10670142 YP_004511115.1 CDS Metme_0166 NC_015572.1 180024 181133 D KEGG: pna:Pnap_3901 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 180024..181133 Methylomonas methanica MC09 10670143 YP_004511116.1 CDS Metme_0167 NC_015572.1 181130 184231 D PFAM: Acriflavin resistance protein; KEGG: pna:Pnap_3902 acriflavin resistance protein; acriflavin resistance protein 181130..184231 Methylomonas methanica MC09 10670144 YP_004511117.1 CDS Metme_0168 NC_015572.1 184257 185117 R PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: bgf:BC1003_3769 procollagen-proline dioxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; procollagen-proline dioxygenase complement(184257..185117) Methylomonas methanica MC09 10670145 YP_004511118.1 CDS Metme_0169 NC_015572.1 185904 187241 D manually curated; KEGG: pol:Bpro_1435 hypothetical protein; hypothetical protein 185904..187241 Methylomonas methanica MC09 10670146 YP_004511119.1 CDS Metme_0170 NC_015572.1 187337 187840 D PFAM: Redoxin; KEGG: sde:Sde_1566 hypothetical protein; redoxin domain-containing protein 187337..187840 Methylomonas methanica MC09 10670147 YP_004511120.1 CDS Metme_0171 NC_015572.1 187850 188065 D KEGG: alv:Alvin_0147 hypothetical protein; hypothetical protein 187850..188065 Methylomonas methanica MC09 10670148 YP_004511121.1 CDS Metme_0172 NC_015572.1 188166 189449 D KEGG: alv:Alvin_0148 hypothetical protein; hypothetical protein 188166..189449 Methylomonas methanica MC09 10670149 YP_004511122.1 CDS Metme_0173 NC_015572.1 189467 190357 D PFAM: ApbE-like lipoprotein; KEGG: alv:Alvin_0149 ApbE family lipoprotein; ApbE family lipoprotein 189467..190357 Methylomonas methanica MC09 10670150 YP_004511123.1 CDS Metme_0174 NC_015572.1 190370 192280 D KEGG: lil:LA_1321 disulfide interchange transmembrane protein; PFAM: Cytochrome c assembly protein, transmembrane region; Protein-disulfide reductase 190370..192280 Methylomonas methanica MC09 10670151 YP_004511124.1 CDS Metme_0175 NC_015572.1 192348 192812 R KEGG: shw:Sputw3181_4033 hypothetical protein; hypothetical protein complement(192348..192812) Methylomonas methanica MC09 10670152 YP_004511125.1 CDS Metme_0176 NC_015572.1 192923 193276 R manually curated; KEGG: mmi:MMAR_3367 hypothetical protein; hypothetical protein complement(192923..193276) Methylomonas methanica MC09 10670153 YP_004511126.1 CDS Metme_0177 NC_015572.1 194101 194721 R KEGG: mca:MCA0843 sulfite oxidase subunit YedZ; HAMAP: Sulfoxide reductase heme-binding subunit yedZ; PFAM: Ferric reductase-like transmembrane component, N-terminal; sulfoxide reductase heme-binding subunit yedZ complement(194101..194721) Methylomonas methanica MC09 10670154 YP_004511127.1 CDS Metme_0178 NC_015572.1 194724 195653 R KEGG: mca:MCA0844 sulfite oxidase subunit YedY; HAMAP: Sulfoxide reductase catalytic subunit yedY; PFAM: Oxidoreductase, molybdopterin binding; sulfoxide reductase catalytic subunit yedY complement(194724..195653) Methylomonas methanica MC09 10670155 YP_004511128.1 CDS Metme_0179 NC_015572.1 195784 196269 R PFAM: DoxX; KEGG: vha:VIBHAR_00355 NADH dehydrogenase; DoxX family protein complement(195784..196269) Methylomonas methanica MC09 10670156 YP_004511129.1 CDS Metme_0180 NC_015572.1 196287 197057 R PFAM: Protein of unknown function DUF2063; KEGG: reh:H16_A1820 hypothetical protein; hypothetical protein complement(196287..197057) Methylomonas methanica MC09 10670157 YP_004511130.1 CDS Metme_0181 NC_015572.1 197041 197919 R KEGG: reh:H16_A1821 hypothetical protein; HAMAP: UPF0276 protein; PFAM: Protein of unknown function DUF692; hypothetical protein complement(197041..197919) Methylomonas methanica MC09 10670158 YP_004511131.1 CDS Metme_0182 NC_015572.1 197935 198201 R PFAM: Protein of unknown function DUF2282, transmembrane; KEGG: vsp:VS_3085 hypothetical protein; hypothetical protein complement(197935..198201) Methylomonas methanica MC09 10670159 YP_004511132.1 CDS Metme_0183 NC_015572.1 198274 199374 R KEGG: bid:Bind_0259 3-carboxymuconate cyclase; 3-carboxymuconate cyclase complement(198274..199374) Methylomonas methanica MC09 10670160 YP_004511133.1 CDS Metme_0184 NC_015572.1 199419 199694 R PFAM: Protein of unknown function DUF2282, transmembrane; KEGG: ppr:PBPRA3515 signal peptide protein; hypothetical protein complement(199419..199694) Methylomonas methanica MC09 10670161 YP_004511134.1 CDS Metme_0185 NC_015572.1 199977 201851 D TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; GAF; PAS fold-4; KEGG: afw:Anae109_4242 sigma-54 dependent trancsriptional regulator; SMART: ATPase, AAA+ type, core; GAF; PAS; PAS/PAC sensor protein 199977..201851 Methylomonas methanica MC09 10670162 YP_004511135.1 CDS Metme_0186 NC_015572.1 202035 202469 R hypothetical protein complement(202035..202469) Methylomonas methanica MC09 10670163 YP_004511136.1 CDS Metme_0187 NC_015572.1 202493 203242 R hypothetical protein complement(202493..203242) Methylomonas methanica MC09 10670164 YP_004511137.1 CDS Metme_0188 NC_015572.1 203322 203627 R KEGG: mmb:Mmol_1761 hypothetical protein; hypothetical protein complement(203322..203627) Methylomonas methanica MC09 10670165 YP_004511138.1 CDS Metme_0189 NC_015572.1 203624 206686 R KEGG: mca:MCA2720 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump complement(203624..206686) Methylomonas methanica MC09 10670166 YP_004511139.1 CDS Metme_0190 NC_015572.1 206686 207777 R TIGRFAM: Secretion protein HlyD; KEGG: mca:MCA2719 heavy metal efflux system protein; RND family efflux transporter MFP subunit complement(206686..207777) Methylomonas methanica MC09 10670167 YP_004511140.1 CDS Metme_0191 NC_015572.1 207774 209087 R KEGG: mca:MCA2718 hypothetical protein; hypothetical protein complement(207774..209087) Methylomonas methanica MC09 10670168 YP_004511141.1 CDS Metme_0192 NC_015572.1 209173 209565 R hypothetical protein complement(209173..209565) Methylomonas methanica MC09 10670169 YP_004511142.1 CDS Metme_0193 NC_015572.1 209706 210659 D PFAM: Mitochondrial inner membrane translocase complex, subunit Tim44-related; KEGG: dba:Dbac_0303 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 209706..210659 Methylomonas methanica MC09 10670170 YP_004511143.1 CDS Metme_0194 NC_015572.1 210662 211279 D PFAM: Methyltransferase type 11; KEGG: mca:MCA1441 UbiE/COQ5 family methlytransferase; type 11 methyltransferase 210662..211279 Methylomonas methanica MC09 10670171 YP_004511144.1 CDS Metme_0195 NC_015572.1 211538 211729 R hypothetical protein complement(211538..211729) Methylomonas methanica MC09 10670172 YP_004511145.1 CDS Metme_0196 NC_015572.1 212111 212956 R PFAM: Spermine synthase; TIGRFAM: Spermine synthase; HAMAP: Spermidine synthase; KEGG: mca:MCA2046 spermidine synthase; spermidine synthase complement(212111..212956) Methylomonas methanica MC09 10670173 YP_004511146.1 CDS Metme_0197 NC_015572.1 213043 214869 D PFAM: Orn/DAP/Arg decarboxylase 2; TIGRFAM: Arginine decarboxylase; HAMAP: Biosynthetic arginine decarboxylase; KEGG: mca:MCA2047 arginine decarboxylase; biosynthetic arginine decarboxylase 213043..214869 Methylomonas methanica MC09 10670174 YP_004511147.1 CDS Metme_0198 NC_015572.1 214914 215519 D PFAM: Lipase, GDSL; KEGG: noc:Noc_1154 lipolytic protein; G-D-S-L family lipolytic protein 214914..215519 Methylomonas methanica MC09 10670175 YP_004511148.1 CDS Metme_0199 NC_015572.1 215570 216427 D KEGG: nwa:Nwat_1020 6-phosphogluconate dehydrogenase NAD-binding protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase 215570..216427 Methylomonas methanica MC09 10670176 YP_004511149.1 CDS Metme_0200 NC_015572.1 216449 217768 D TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: tgr:Tgr7_2339 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase 216449..217768 Methylomonas methanica MC09 10670177 YP_004511150.1 CDS Metme_0201 NC_015572.1 217870 218259 D KEGG: mep:MPQ_2627 hypothetical protein; hypothetical protein 217870..218259 Methylomonas methanica MC09 10670178 YP_004511151.1 CDS Metme_0202 NC_015572.1 218333 219256 R PFAM: Peptidase M10A/M12B, matrixin/adamalysin; KEGG: tbd:Tbd_0803 hypothetical protein; peptidase M10A and M12B matrixin and adamalysin complement(218333..219256) Methylomonas methanica MC09 10670179 YP_004511152.1 CDS Metme_0203 NC_015572.1 219452 220129 R TIGRFAM: Methyltransferase FkbM; KEGG: pub:SAR11_0393 SAM-dependent methyltransferase; FkbM family methyltransferase complement(219452..220129) Methylomonas methanica MC09 10670180 YP_004511153.1 CDS Metme_0204 NC_015572.1 220288 221037 R PFAM: Pentapeptide repeat; KEGG: mdi:METDI1246 hypothetical protein; pentapeptide repeat-containing protein complement(220288..221037) Methylomonas methanica MC09 10670181 YP_004511154.1 CDS Metme_0205 NC_015572.1 221195 222064 R TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate octaprenyltransferase; KEGG: mca:MCA1336 4-hydroxybenzoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate octaprenyltransferase complement(221195..222064) Methylomonas methanica MC09 10670182 YP_004511155.1 CDS Metme_0206 NC_015572.1 222100 222996 R KEGG: bac:BamMC406_0008 hypothetical protein; hypothetical protein complement(222100..222996) Methylomonas methanica MC09 10670183 YP_004511156.1 CDS Metme_0207 NC_015572.1 223001 224191 R KEGG: bac:BamMC406_0007 AAA ATPase; ATPase AAA complement(223001..224191) Methylomonas methanica MC09 10670184 YP_004511157.1 CDS Metme_0208 NC_015572.1 224216 225712 R KEGG: bac:BamMC406_0006 cell divisionFtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; SMART: ATPase, AAA+ type, core; DNA translocase FtsK complement(224216..225712) Methylomonas methanica MC09 10670185 YP_004511158.1 CDS Metme_0209 NC_015572.1 225705 227738 R TIGRFAM: DNA sulphur modification protein DndD; KEGG: bac:BamMC406_0005 hypothetical protein; DNA sulfur modification protein DndD complement(225705..227738) Methylomonas methanica MC09 10670186 YP_004511159.1 CDS Metme_0210 NC_015572.1 227735 227953 R hypothetical protein complement(227735..227953) Methylomonas methanica MC09 10670187 YP_004511160.1 CDS Metme_0211 NC_015572.1 227926 229065 R PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: tgr:Tgr7_0620 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase complement(227926..229065) Methylomonas methanica MC09 10670188 YP_004511161.1 CDS Metme_0212 NC_015572.1 229235 229594 R KEGG: nhl:Nhal_0606 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(229235..229594) Methylomonas methanica MC09 10670189 YP_004511162.1 CDS Metme_0213 NC_015572.1 229591 229845 R PFAM: Plasmid stabilisation system; KEGG: nhl:Nhal_1127 plasmid stabilization system; plasmid stabilization system complement(229591..229845) Methylomonas methanica MC09 10670190 YP_004511163.1 CDS Metme_0214 NC_015572.1 229934 231364 R TIGRFAM: RfaE bifunctional protein, domain I; RfaE bifunctional protein, domain II; Cytidyltransferase-related; HAMAP: Bifunctional protein hldE; KEGG: mca:MCA1736 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; PFAM: Carbohydrate/purine kinase; Cytidylyltransferase; Bifunctional protein hldE complement(229934..231364) Methylomonas methanica MC09 10670191 YP_004511164.1 CDS Metme_0215 NC_015572.1 231437 231784 D KEGG: maq:Maqu_0914 arsenate reductase; TIGRFAM: Arsenate reductase; PFAM: Arsenate reductase-like; arsenate reductase 231437..231784 Methylomonas methanica MC09 10670192 YP_004511165.1 CDS Metme_0216 NC_015572.1 231784 232380 D KEGG: cti:RALTA_A1221 TRP repressor binding protein WrbA; TIGRFAM: Flavoprotein WrbA; PFAM: Flavodoxin/nitric oxide synthase; flavoprotein WrbA 231784..232380 Methylomonas methanica MC09 10670193 YP_004511166.1 CDS Metme_0217 NC_015572.1 232386 233039 R TIGRFAM: Methyltransferase FkbM; KEGG: cyn:Cyan7425_0541 methyltransferase FkbM family; FkbM family methyltransferase complement(232386..233039) Methylomonas methanica MC09 10670194 YP_004511167.1 CDS Metme_0218 NC_015572.1 233085 233861 R PFAM: Glycosyl transferase, family 11; KEGG: mpl:Mpal_2194 glycosyl transferase 11; glycosyl transferase family protein complement(233085..233861) Methylomonas methanica MC09 10670195 YP_004511168.1 CDS Metme_0219 NC_015572.1 233932 234732 R PFAM: Glycosyl transferase, family 2; KEGG: cyn:Cyan7425_2255 glycosyl transferase 2; family 2 glycosyl transferase complement(233932..234732) Methylomonas methanica MC09 10670196 YP_004511169.1 CDS Metme_0220 NC_015572.1 234834 236648 R KEGG: reu:Reut_A0772 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; hypothetical protein complement(234834..236648) Methylomonas methanica MC09 10670197 YP_004511170.1 CDS Metme_0221 NC_015572.1 236752 242022 R KEGG: rhi:NGR_c02320 conserved hypothetical protein, contains ice nucleation protein domain; hypothetical protein complement(236752..242022) Methylomonas methanica MC09 10670198 YP_004511171.1 CDS Metme_0222 NC_015572.1 242437 243684 R PFAM: Protein of unknown function DUF2279, periplasmic lipoprotein; KEGG: nmu:Nmul_A2261 hypothetical protein; hypothetical protein complement(242437..243684) Methylomonas methanica MC09 10670199 YP_004511172.1 CDS Metme_0223 NC_015572.1 243897 244802 R PFAM: Protein of unknown function DUF882, bacterial; KEGG: aeh:Mlg_1034 hypothetical protein; hypothetical protein complement(243897..244802) Methylomonas methanica MC09 10670200 YP_004511173.1 CDS Metme_0224 NC_015572.1 245129 245803 R PFAM: Phytanoyl-CoA dioxygenase; KEGG: phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase complement(245129..245803) Methylomonas methanica MC09 10670201 YP_004511174.1 CDS Metme_0225 NC_015572.1 245976 246569 R KEGG: nde:NIDE3840 hypothetical protein; hypothetical protein complement(245976..246569) Methylomonas methanica MC09 10670202 YP_004511175.1 CDS Metme_0226 NC_015572.1 246919 248805 D KEGG: tgr:Tgr7_0690 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 246919..248805 Methylomonas methanica MC09 10670203 YP_004511176.1 CDS Metme_0227 NC_015572.1 248809 249321 D KEGG: mca:MCA1366 hypothetical protein; hypothetical protein 248809..249321 Methylomonas methanica MC09 10670204 YP_004511177.1 CDS Metme_0228 NC_015572.1 249329 249769 D PFAM: UspA; KEGG: nmu:Nmul_A1974 hypothetical protein; UspA domain-containing protein 249329..249769 Methylomonas methanica MC09 10670205 YP_004511178.1 CDS Metme_0229 NC_015572.1 249762 250283 D KEGG: mca:MCA0462 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase; adenosylcobinamide-phosphate guanylyltransferase 249762..250283 Methylomonas methanica MC09 10670206 YP_004511179.1 CDS Metme_0230 NC_015572.1 250283 251326 D PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like, core; TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; HAMAP: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; KEGG: pfs:PFLU4483 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 250283..251326 Methylomonas methanica MC09 10670207 YP_004511180.1 CDS Metme_0231 NC_015572.1 251505 254654 R KEGG: nwa:Nwat_1612 CzcA family heavy metal efflux pump; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump complement(251505..254654) Methylomonas methanica MC09 10670208 YP_004511181.1 CDS Metme_0232 NC_015572.1 254647 256080 R KEGG: nhl:Nhal_1688 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(254647..256080) Methylomonas methanica MC09 10670209 YP_004511182.1 CDS Metme_0233 NC_015572.1 256073 257362 R PFAM: Outer membrane efflux protein; KEGG: noc:Noc_1528 outer membrane efflux protein; outer membrane efflux protein complement(256073..257362) Methylomonas methanica MC09 10670210 YP_004511183.1 CDS Metme_0234 NC_015572.1 258130 258543 D KEGG: dev:DhcVS_204 hypothetical protein; hypothetical protein 258130..258543 Methylomonas methanica MC09 10670211 YP_004511184.1 CDS Metme_0235 NC_015572.1 258612 259334 D TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; HAMAP: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; KEGG: psp:PSPPH_3693 cobalamin synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; cobalamin synthase 258612..259334 Methylomonas methanica MC09 10670212 YP_004511185.1 CDS Metme_0236 NC_015572.1 259331 259972 D KEGG: bte:BTH_I1401 nitroreductase; TIGRFAM: Cob(II)yrinic acid a,c-diamide reductase; PFAM: Nitroreductase-like; cob(II)yrinic acid a,c-diamide reductase 259331..259972 Methylomonas methanica MC09 10670213 YP_004511186.1 CDS Metme_0237 NC_015572.1 259975 261447 D TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: psa:PST_1297 cobyric acid synthase; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase; cobyric acid synthase 259975..261447 Methylomonas methanica MC09 10670214 YP_004511187.1 CDS Metme_0238 NC_015572.1 261470 264928 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; NMT1/THI5 like; Extracellular solute-binding protein, family 3; PAS fold-3; PAS fold; KEGG: gca:Galf_1869 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase complement(261470..264928) Methylomonas methanica MC09 10670215 YP_004511188.1 CDS Metme_0239 NC_015572.1 265057 265770 R KEGG: maq:Maqu_0293 hypothetical protein; hypothetical protein complement(265057..265770) Methylomonas methanica MC09 10670216 YP_004511189.1 CDS Metme_0240 NC_015572.1 265807 266280 R PFAM: Adenylate cyclase; KEGG: tgr:Tgr7_1910 adenylate cyclase; adenylate cyclase complement(265807..266280) Methylomonas methanica MC09 10670217 YP_004511190.1 CDS Metme_0241 NC_015572.1 266402 266983 D PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: mca:MCA2458 superoxide dismutase, Fe; manganese/iron superoxide dismutase 266402..266983 Methylomonas methanica MC09 10670218 YP_004511191.1 CDS Metme_0242 NC_015572.1 267066 268238 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: mmb:Mmol_0022 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase complement(267066..268238) Methylomonas methanica MC09 10670219 YP_004511192.1 CDS Metme_0243 NC_015572.1 268290 268412 R hypothetical protein complement(268290..268412) Methylomonas methanica MC09 10670220 YP_004511193.1 CDS Metme_0244 NC_015572.1 268495 268692 R hypothetical protein complement(268495..268692) Methylomonas methanica MC09 10670221 YP_004511194.1 CDS Metme_0245 NC_015572.1 268788 270110 R KEGG: nde:NIDE2008 outer membrane autotransporter; TIGRFAM: Outer membrane autotransporter barrel; PFAM: Autotransporter beta-domain; outer membrane autotransporter barrel domain-containing protein complement(268788..270110) Methylomonas methanica MC09 10670222 YP_004511195.1 CDS Metme_0246 NC_015572.1 270133 270639 R TIGRFAM: Peptidase A31, hydrogen uptake protein; KEGG: mca:MCA0113 HoxW protein; hydrogenase maturation protease complement(270133..270639) Methylomonas methanica MC09 10670223 YP_004511196.1 CDS Metme_0247 NC_015572.1 270649 272139 R KEGG: mca:MCA0114 NAD-reducing hydrogenase, beta subunit; PFAM: Nickel-dependent hydrogenase, large subunit; Hydrogen dehydrogenase complement(270649..272139) Methylomonas methanica MC09 10670224 YP_004511197.1 CDS Metme_0248 NC_015572.1 272152 272688 R KEGG: mca:MCA2726 NAD-reducing hydrogenase, delta subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; Hydrogen dehydrogenase complement(272152..272688) Methylomonas methanica MC09 10670225 YP_004511198.1 CDS Metme_0249 NC_015572.1 272675 273394 R KEGG: mca:MCA2725 NAD-reducing hydrogenase, gamma subunit; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Hydrogen dehydrogenase complement(272675..273394) Methylomonas methanica MC09 10670226 YP_004511199.1 CDS Metme_0250 NC_015572.1 273396 275174 R KEGG: mca:MCA2724 NAD-reducing hydrogenase, alpha subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Hydrogen dehydrogenase complement(273396..275174) Methylomonas methanica MC09 10670227 YP_004511200.1 CDS Metme_0251 NC_015572.1 275212 275676 D PFAM: Protein of unknown function DUF721; KEGG: mca:MCA2421 hypothetical protein; hypothetical protein 275212..275676 Methylomonas methanica MC09 10670228 YP_004511201.1 CDS Metme_0252 NC_015572.1 275724 276650 R TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; HAMAP: UDP-3-O-acyl N-acetylglucosamine deacetylase; KEGG: mca:MCA2422 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase complement(275724..276650) Methylomonas methanica MC09 10670229 YP_004511202.1 CDS Metme_0253 NC_015572.1 276734 277891 R KEGG: mca:MCA2423 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ complement(276734..277891) Methylomonas methanica MC09 10670230 YP_004511203.1 CDS Metme_0254 NC_015572.1 277916 279142 R KEGG: mca:MCA2424 cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; cell division protein FtsA complement(277916..279142) Methylomonas methanica MC09 10670231 YP_004511204.1 CDS Metme_0255 NC_015572.1 279197 279946 R PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: pag:PLES_47881 cell division protein FtsQ; cell division protein FtsQ complement(279197..279946) Methylomonas methanica MC09 10670232 YP_004511205.1 CDS Metme_0256 NC_015572.1 279957 280892 R PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: mca:MCA2426 D-alanine--D-alanine ligase; D-alanine--D-alanine ligase complement(279957..280892) Methylomonas methanica MC09 10670233 YP_004511206.1 CDS Metme_0257 NC_015572.1 280889 281779 R PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: mca:MCA2427 UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(280889..281779) Methylomonas methanica MC09 10670234 YP_004511207.1 CDS Metme_0258 NC_015572.1 281776 283224 R PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: mca:MCA2428 UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(281776..283224) Methylomonas methanica MC09 10670235 YP_004511208.1 CDS Metme_0259 NC_015572.1 283221 284303 R TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: mca:MCA2429 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase complement(283221..284303) Methylomonas methanica MC09 10670236 YP_004511209.1 CDS Metme_0260 NC_015572.1 284300 285466 R KEGG: mca:MCA2430 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW complement(284300..285466) Methylomonas methanica MC09 10670237 YP_004511210.1 CDS Metme_0261 NC_015572.1 285466 286830 R TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: mca:MCA2431 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(285466..286830) Methylomonas methanica MC09 10670238 YP_004511211.1 CDS Metme_0262 NC_015572.1 286833 287915 R TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: mca:MCA2432 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(286833..287915) Methylomonas methanica MC09 10670239 YP_004511212.1 CDS Metme_0263 NC_015572.1 287915 289282 R TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; KEGG: nhl:Nhal_0486 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D -alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(287915..289282) Methylomonas methanica MC09 10670240 YP_004511213.1 CDS Metme_0264 NC_015572.1 289279 290736 R PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: mca:MCA2433 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase complement(289279..290736) Methylomonas methanica MC09 10670241 YP_004511214.1 CDS Metme_0265 NC_015572.1 290733 292457 R KEGG: mca:MCA2434 penicillin-binding protein 3; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase complement(290733..292457) Methylomonas methanica MC09 10670242 YP_004511215.1 CDS Metme_0266 NC_015572.1 292458 292730 R KEGG: mca:MCA2435 cell division protein FtsL, TIGRFAM: Cell division protein, FtsL -like; PFAM: Cell division protein FtsL; cell division protein FtsL complement(292458..292730) Methylomonas methanica MC09 10670243 YP_004511216.1 CDS Metme_0267 NC_015572.1 292730 293659 R TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: amc:MADE_03266 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; Ribosomal RNA small subunit methyltransferase H complement(292730..293659) Methylomonas methanica MC09 10670244 YP_004511217.1 CDS Metme_0268 NC_015572.1 293665 294132 R TIGRFAM: MraZ; HAMAP: MraZ; KEGG: mca:MCA2437 cell division protein MraZ; PFAM: MraZ domain; protein mraZ complement(293665..294132) Methylomonas methanica MC09 10670245 YP_004511218.1 CDS Metme_0269 NC_015572.1 294256 294459 D hypothetical protein 294256..294459 Methylomonas methanica MC09 10670246 YP_004511219.1 CDS Metme_0270 NC_015572.1 294463 295461 R KEGG: cps:CPS_4387 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; glycerol-3-phosphate dehydrogenase complement(294463..295461) Methylomonas methanica MC09 10670247 YP_004511220.1 CDS Metme_0271 NC_015572.1 295468 295944 R TIGRFAM: Bacterial protein export chaperone SecB; HAMAP: Bacterial protein export chaperone SecB; KEGG: mca:MCA2537 preprotein translocase subunit SecB; PFAM: Bacterial protein export chaperone SecB; protein-export protein secB complement(295468..295944) Methylomonas methanica MC09 10670248 YP_004511221.1 CDS Metme_0272 NC_015572.1 295970 296407 R KEGG: mca:MCA2536 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein complement(295970..296407) Methylomonas methanica MC09 10670249 YP_004511222.1 CDS Metme_0273 NC_015572.1 296443 296754 R KEGG: tkm:TK90_2022 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(296443..296754) Methylomonas methanica MC09 10670250 YP_004511223.1 CDS Metme_0274 NC_015572.1 297068 298354 D PFAM: Peptidase M23; KEGG: mca:MCA2534 peptidase M23/M37 domain-containing protein; peptidase M23 297068..298354 Methylomonas methanica MC09 10670251 YP_004511224.1 CDS Metme_0275 NC_015572.1 298391 299746 D TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: mca:MCA2533 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; carboxyl-terminal protease 298391..299746 Methylomonas methanica MC09 10670252 YP_004511225.1 CDS Metme_0276 NC_015572.1 299839 300291 R PFAM: Uncharacterised conserved protein UCP030820; KEGG: mca:MCA2060 hypothetical protein; hypothetical protein complement(299839..300291) Methylomonas methanica MC09 10670253 YP_004511226.1 CDS Metme_0277 NC_015572.1 300278 301930 R PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; KEGG: mca:MCA2059 nitrite/sulfite reductase; nitrite and sulfite reductase 4Fe-4S region complement(300278..301930) Methylomonas methanica MC09 10670254 YP_004511227.1 CDS Metme_0278 NC_015572.1 302087 303448 D PFAM: Divalent ion symporter; KEGG: mca:MCA2058 transporter; citrate transporter 302087..303448 Methylomonas methanica MC09 10670255 YP_004511228.1 CDS Metme_0279 NC_015572.1 303488 304843 D PFAM: Major facilitator superfamily MFS-1; KEGG: maq:Maqu_2584 major facilitator superfamily transporter; major facilitator superfamily protein 303488..304843 Methylomonas methanica MC09 10670256 YP_004511229.1 CDS Metme_0280 NC_015572.1 304937 305137 D PFAM: Ribosomal protein L31; manually curated; TIGRFAM: Ribosomal protein L31; KEGG: nmu:Nmul_A2086 50S ribosomal protein L31; HAMAP: 50S ribosomal protein L31; 50S ribosomal protein L31 304937..305137 Methylomonas methanica MC09 10670257 YP_004511230.1 CDS Metme_0281 NC_015572.1 305200 307569 R KEGG: noc:Noc_0246 penicillin-binding protein 1A; TIGRFAM: Penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; penicillin-binding protein complement(305200..307569) Methylomonas methanica MC09 10670258 YP_004511231.1 CDS Metme_0282 NC_015572.1 307779 308840 D TIGRFAM: Type IV pilus assembly protein PilM; KEGG: nwa:Nwat_0345 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 307779..308840 Methylomonas methanica MC09 10670259 YP_004511232.1 CDS Metme_0283 NC_015572.1 308840 309412 D PFAM: Fimbrial assembly; KEGG: alv:Alvin_3055 fimbrial assembly family protein; fimbrial assembly family protein 308840..309412 Methylomonas methanica MC09 10670260 YP_004511233.1 CDS Metme_0284 NC_015572.1 309409 310041 D PFAM: Pilus assembly protein, PilO; KEGG: mca:MCA0327 type 4 fimbrial biogenesis protein PilO; Pilus assembly protein PilO 309409..310041 Methylomonas methanica MC09 10670261 YP_004511234.1 CDS Metme_0285 NC_015572.1 310041 310595 D PFAM: Pilus assembly protein PilP; KEGG: mca:MCA0328 type 4 fimbrial biogenesis protein PilP; Pilus assembly protein PilP 310041..310595 Methylomonas methanica MC09 10670262 YP_004511235.1 CDS Metme_0286 NC_015572.1 310609 312873 D KEGG: alv:Alvin_3058 type IV pilus secretin PilQ; TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; NolW-like; type IV pilus secretin PilQ 310609..312873 Methylomonas methanica MC09 10670263 YP_004511236.1 CDS Metme_0287 NC_015572.1 312963 314471 R TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: mca:MCA2139 Mg chelatase-related protein; SMART: ATPase, AAA+ type, core; Mg chelatase subunit ChlI complement(312963..314471) Methylomonas methanica MC09 10670264 YP_004511237.1 CDS Metme_0288 NC_015572.1 314479 314730 R PFAM: Protein of unknown function DUF526; KEGG: amc:MADE_00075 hypothetical protein; hypothetical protein complement(314479..314730) Methylomonas methanica MC09 10670265 YP_004511238.1 CDS Metme_0289 NC_015572.1 314736 315350 R KEGG: nhl:Nhal_2066 regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(314736..315350) Methylomonas methanica MC09 10670266 YP_004511239.1 CDS Metme_0290 NC_015572.1 315438 316343 D PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: mca:MCA0468 MoxR protein; ATPase 315438..316343 Methylomonas methanica MC09 10670267 YP_004511240.1 CDS Metme_0291 NC_015572.1 316340 317302 D KEGG: mca:MCA0467 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF58; hypothetical protein 316340..317302 Methylomonas methanica MC09 10670268 YP_004511241.1 CDS Metme_0292 NC_015572.1 317393 319366 D KEGG: mca:MCA0466 transglutaminase; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; transglutaminase domain-containing protein 317393..319366 Methylomonas methanica MC09 10670269 YP_004511242.1 CDS Metme_0293 NC_015572.1 319363 319620 R hypothetical protein complement(319363..319620) Methylomonas methanica MC09 10670270 YP_004511243.1 CDS Metme_0294 NC_015572.1 319725 320645 D KEGG: mca:MCA3112 SPFH domain-containing protein/band 7 family protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 319725..320645 Methylomonas methanica MC09 10670271 YP_004511244.1 CDS Metme_0295 NC_015572.1 320649 321095 D PFAM: Nodulation efficiency, NfeD; KEGG: mca:MCA3111 hypothetical protein; hypothetical protein 320649..321095 Methylomonas methanica MC09 10670272 YP_004511245.1 CDS Metme_0296 NC_015572.1 321288 321947 D KEGG: pap:PSPA7_5497 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 321288..321947 Methylomonas methanica MC09 10670273 YP_004511246.1 CDS Metme_0297 NC_015572.1 321951 323360 D KEGG: gca:Galf_0851 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 321951..323360 Methylomonas methanica MC09 10670274 YP_004511247.1 CDS Metme_0298 NC_015572.1 323420 324658 D KEGG: mca:MCA2169 BNR repeat-containing protein; BNR repeat-containing protein 323420..324658 Methylomonas methanica MC09 10670275 YP_004511248.1 CDS Metme_0299 NC_015572.1 324681 325052 D PFAM: Copper resistance protein CopC, core; KEGG: mca:MCA2170 copper resistance protein; copper resistance protein CopC 324681..325052 Methylomonas methanica MC09 10670276 YP_004511249.1 CDS Metme_0300 NC_015572.1 325084 325743 D KEGG: nhl:Nhal_3789 hypothetical protein; hypothetical protein 325084..325743 Methylomonas methanica MC09 10670277 YP_004511250.1 CDS Metme_0301 NC_015572.1 325754 326851 D KEGG: msv:Mesil_2537 hypothetical protein; hypothetical protein 325754..326851 Methylomonas methanica MC09 10670278 YP_004511251.1 CDS Metme_0302 NC_015572.1 327074 327514 R hypothetical protein complement(327074..327514) Methylomonas methanica MC09 10670279 YP_004511252.1 CDS Metme_0303 NC_015572.1 327802 328554 D KEGG: mca:MCA2855 ammonia monooxygenase/methane monooxygenase, subunit C family protein; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 327802..328554 Methylomonas methanica MC09 10670280 YP_004511253.1 CDS Metme_0304 NC_015572.1 328665 329414 D KEGG: mca:MCA2854 methane monooxygenase, A subunit; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A 328665..329414 Methylomonas methanica MC09 10670281 YP_004511254.1 CDS Metme_0305 NC_015572.1 329513 330757 D KEGG: mca:MCA2853 methane monooxygenase, B subunit; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B 329513..330757 Methylomonas methanica MC09 10670282 YP_004511255.1 CDS Metme_0306 NC_015572.1 330987 331397 D KEGG: mca:MCA1881 hypothetical protein; hypothetical protein 330987..331397 Methylomonas methanica MC09 10670283 YP_004511256.1 CDS Metme_0307 NC_015572.1 331554 332849 D KEGG: net:Neut_0861 citrate synthase I; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like; citrate synthase I 331554..332849 Methylomonas methanica MC09 10670284 YP_004511257.1 CDS Metme_0308 NC_015572.1 332915 333190 R PFAM: Late competence development protein ComFB; KEGG: alv:Alvin_2945 late competence development protein ComFB; Late competence development protein ComFB complement(332915..333190) Methylomonas methanica MC09 10670285 YP_004511258.1 CDS Metme_0309 NC_015572.1 333277 334476 R PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nhl:Nhal_3357 protein of unknown function DUF214; hypothetical protein complement(333277..334476) Methylomonas methanica MC09 10670286 YP_004511259.1 CDS Metme_0310 NC_015572.1 334480 335685 R PFAM: Protein of unknown function DUF214, permase predicted; KEGG: slt:Slit_2078 protein of unknown function DUF214; hypothetical protein complement(334480..335685) Methylomonas methanica MC09 10670287 YP_004511260.1 CDS Metme_0311 NC_015572.1 335857 336723 D KEGG: mca:MCA1824 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF6, transmembrane; hypothetical protein 335857..336723 Methylomonas methanica MC09 10670288 YP_004511261.1 CDS Metme_0312 NC_015572.1 336887 337834 D KEGG: gca:Galf_0178 hypothetical protein; hypothetical protein 336887..337834 Methylomonas methanica MC09 10670289 YP_004511262.1 CDS Metme_0313 NC_015572.1 338178 339188 D KEGG: mca:MCA0041 Gfo/Idh/MocA family oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase 338178..339188 Methylomonas methanica MC09 10670290 YP_004511263.1 CDS Metme_0314 NC_015572.1 339212 341032 D KEGG: kko:Kkor_0246 hypothetical protein; hypothetical protein 339212..341032 Methylomonas methanica MC09 10670291 YP_004511264.1 CDS Metme_0315 NC_015572.1 341094 341291 D KEGG: cpb:Cphamn1_1470 hypothetical protein; hypothetical protein 341094..341291 Methylomonas methanica MC09 10670292 YP_004511265.1 CDS Metme_0316 NC_015572.1 341303 341644 D PFAM: Uncharacterised conserved protein UCP025560; KEGG: ppr:PBPRB0969 hypothetical protein; hypothetical protein 341303..341644 Methylomonas methanica MC09 10670293 YP_004511266.1 CDS Metme_0317 NC_015572.1 341718 342038 D hypothetical protein 341718..342038 Methylomonas methanica MC09 10670294 YP_004511267.1 CDS Metme_0318 NC_015572.1 342432 344327 D PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: glo:Glov_2457 type II secretion system protein E; type II secretion system protein E 342432..344327 Methylomonas methanica MC09 10670295 YP_004511268.1 CDS Metme_0319 NC_015572.1 344296 345180 D TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD; KEGG: signal transduction protein; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 344296..345180 Methylomonas methanica MC09 10670296 YP_004511269.1 CDS Metme_0320 NC_015572.1 346046 346996 D PFAM: RNA-directed DNA polymerase (reverse transcriptase); KEGG: hmo:HM1_3100 reverse transcriptase (RNA-dependent DNA polymerase); RNA-directed DNA polymerase 346046..346996 Methylomonas methanica MC09 10670297 YP_004511270.1 CDS Metme_0321 NC_015572.1 347019 348101 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(347019..348101) Methylomonas methanica MC09 10670298 YP_004511271.1 CDS Metme_0323 NC_015572.1 349158 349658 D KEGG: pna:Pnap_1740 transposase; transposase 349158..349658 Methylomonas methanica MC09 10670300 YP_004511272.1 CDS Metme_0324 NC_015572.1 349655 350737 D PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit 349655..350737 Methylomonas methanica MC09 10670301 YP_004511273.1 CDS Metme_0326 NC_015572.1 351921 352991 D KEGG: bpt:Bpet3736 transposase; transposase 351921..352991 Methylomonas methanica MC09 10670303 YP_004511274.1 CDS Metme_0327 NC_015572.1 353049 353639 D KEGG: vex:VEA_003187 hypothetical protein; hypothetical protein 353049..353639 Methylomonas methanica MC09 10670304 YP_004511275.1 CDS Metme_0328 NC_015572.1 353876 354331 R PFAM: Ankyrin repeat; KEGG: mca:MCA2117 rhodanese-like domain/ankyrin repeat-containing protein; ankyrin complement(353876..354331) Methylomonas methanica MC09 10670305 YP_004511276.1 CDS Metme_0329 NC_015572.1 354346 355023 R KEGG: ttu:TERTU_4003 hypothetical protein; hypothetical protein complement(354346..355023) Methylomonas methanica MC09 10670306 YP_004511277.1 CDS Metme_0330 NC_015572.1 355013 355780 R PFAM: LRV FeS4 cluster; Leucine rich repeat variant; KEGG: avn:Avin_01440 nitrogen fixing leucine rich variant repeat 4Fe-4S cluster protein; LRV FeS4 cluster domain-containing protein complement(355013..355780) Methylomonas methanica MC09 10670307 YP_004511278.1 CDS Metme_0331 NC_015572.1 355783 356337 R KEGG: azo:azo0014 flavodoxin FldA; TIGRFAM: Flavodoxin, long chain; PFAM: Flavodoxin/nitric oxide synthase; flavodoxin complement(355783..356337) Methylomonas methanica MC09 10670308 YP_004511279.1 CDS Metme_0332 NC_015572.1 356719 357717 D KEGG: hypothetical protein; hypothetical protein 356719..357717 Methylomonas methanica MC09 10670309 YP_004511280.1 CDS Metme_0333 NC_015572.1 357718 358923 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: monooxygenase FAD-binding protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(357718..358923) Methylomonas methanica MC09 10670310 YP_004511281.1 CDS Metme_0334 NC_015572.1 358947 359366 R KEGG: azo:azo2838 hypothetical protein; hypothetical protein complement(358947..359366) Methylomonas methanica MC09 10670311 YP_004511282.1 CDS Metme_0335 NC_015572.1 359427 360167 R KEGG: rsc:RCFBP_21058 hypothetical protein; hypothetical protein complement(359427..360167) Methylomonas methanica MC09 10670312 YP_004511283.1 CDS Metme_0336 NC_015572.1 360167 361369 R KEGG: tkm:TK90_0475 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; 3-ketoacyl-ACP synthase I complement(360167..361369) Methylomonas methanica MC09 10670313 YP_004511284.1 CDS Metme_0337 NC_015572.1 361366 363669 R KEGG: hypothetical xanthomonadin exporter protein; hypothetical protein complement(361366..363669) Methylomonas methanica MC09 10670314 YP_004511285.1 CDS Metme_0338 NC_015572.1 363673 364299 R KEGG: reh:H16_B1664 fatty acyl CoA synthetase; fatty acyl CoA synthetase complement(363673..364299) Methylomonas methanica MC09 10670315 YP_004511286.1 CDS Metme_0339 NC_015572.1 364296 364916 R KEGG: smt:Smal_3921 hypothetical protein; hypothetical protein complement(364296..364916) Methylomonas methanica MC09 10670316 YP_004511287.1 CDS Metme_0340 NC_015572.1 364918 365181 R KEGG: rpf:Rpic12D_0322 acyl carrier protein; acyl carrier protein complement(364918..365181) Methylomonas methanica MC09 10670317 YP_004511288.1 CDS Metme_0341 NC_015572.1 365262 365810 D KEGG: mlo:mlr2550 hypothetical protein; hypothetical protein 365262..365810 Methylomonas methanica MC09 10670318 YP_004511289.1 CDS Metme_0342 NC_015572.1 365861 366103 D PFAM: Phosphopantetheine-binding; KEGG: tgr:Tgr7_2385 hypothetical protein; phosphopantetheine-binding protein 365861..366103 Methylomonas methanica MC09 10670319 YP_004511290.1 CDS Metme_0343 NC_015572.1 366100 367392 D KEGG: scl:sce6182 hypothetical protein; hypothetical protein 366100..367392 Methylomonas methanica MC09 10670320 YP_004511291.1 CDS Metme_0344 NC_015572.1 367396 368823 D KEGG: pag:PLES_25871 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; phenylalanine racemase 367396..368823 Methylomonas methanica MC09 10670321 YP_004511292.1 CDS Metme_0345 NC_015572.1 368901 369842 D KEGG: dar:Daro_2941 hypothetical protein; PFAM: MTH538 TIR-like domain; SMART: Toll-Interleukin receptor; hypothetical protein 368901..369842 Methylomonas methanica MC09 10670322 YP_004511293.1 CDS Metme_0346 NC_015572.1 369870 370979 D KEGG: brh:RBRH_03863 isovaleryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; isovaleryl-CoA dehydrogenase 369870..370979 Methylomonas methanica MC09 10670323 YP_004511294.1 CDS Metme_0347 NC_015572.1 371130 371507 D KEGG: fpl:Ferp_0792 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 371130..371507 Methylomonas methanica MC09 10670324 YP_004511295.1 CDS Metme_0348 NC_015572.1 371591 372673 D PFAM: Uncharacterised protein family UPF0118; KEGG: pst:PSPTO_2221 lipoprotein; hypothetical protein 371591..372673 Methylomonas methanica MC09 10670325 YP_004511296.1 CDS Metme_0349 NC_015572.1 372688 373704 R KEGG: tbd:Tbd_2715 threonine-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: Aminotransferase, class I/II; L-threonine-O-3-phosphate decarboxylase complement(372688..373704) Methylomonas methanica MC09 10670326 YP_004511297.1 CDS Metme_0350 NC_015572.1 373697 374614 R TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiB; HAMAP: Cobalamin biosynthesis protein cbiB; KEGG: mfa:Mfla_0102 cobalamin biosynthesis protein; PFAM: Cobalamin (vitamin B12) biosynthesis CbiB; cobalamin biosynthesis protein CbiB complement(373697..374614) Methylomonas methanica MC09 10670327 YP_004511298.1 CDS Metme_0351 NC_015572.1 374653 375225 R KEGG: gca:Galf_0313 hypothetical protein; hypothetical protein complement(374653..375225) Methylomonas methanica MC09 10670328 YP_004511299.1 CDS Metme_0352 NC_015572.1 375242 377059 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: neu:NE0636 TonB-dependent receptor protein; TonB-dependent receptor plug complement(375242..377059) Methylomonas methanica MC09 10670329 YP_004511300.1 CDS Metme_0353 NC_015572.1 377548 378006 D KEGG: tmz:Tmz1t_0820 flagellar assembly protein FliW; HAMAP: Flagellar assembly factor FliW; PFAM: Flagellar assembly factor FliW; flagellar assembly protein FliW 377548..378006 Methylomonas methanica MC09 10670330 YP_004511301.1 CDS Metme_0354 NC_015572.1 378051 378431 R PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: mca:MCA2316 aspartate alpha-decarboxylase; aspartate 1-decarboxylase complement(378051..378431) Methylomonas methanica MC09 10670331 YP_004511302.1 CDS Metme_0355 NC_015572.1 378534 379382 R TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; HAMAP: Pantoate-beta-alanine ligase; KEGG: psa:PST_3297 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantothenate synthetase complement(378534..379382) Methylomonas methanica MC09 10670332 YP_004511303.1 CDS Metme_0356 NC_015572.1 379387 380196 R PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: nhl:Nhal_1072 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(379387..380196) Methylomonas methanica MC09 10670333 YP_004511304.1 CDS Metme_0357 NC_015572.1 380193 380696 R TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: tgr:Tgr7_0881 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(380193..380696) Methylomonas methanica MC09 10670334 YP_004511305.1 CDS Metme_0358 NC_015572.1 380693 382120 R TIGRFAM: Poly(A) polymerase, PcnB; KEGG: mca:MCA2312 polyA polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase complement(380693..382120) Methylomonas methanica MC09 10670335 YP_004511306.1 CDS Metme_0359 NC_015572.1 382313 382492 D hypothetical protein 382313..382492 Methylomonas methanica MC09 10670336 YP_004511307.1 CDS Metme_0360 NC_015572.1 382493 382972 D KEGG: nwa:Nwat_1709 RDD domain-containing protein; manually curated; PFAM: RDD; RDD domain-containing protein 382493..382972 Methylomonas methanica MC09 10670337 YP_004511308.1 CDS Metme_0361 NC_015572.1 383025 383411 D KEGG: mca:MCA1546 hypothetical protein; hypothetical protein 383025..383411 Methylomonas methanica MC09 10670338 YP_004511309.1 CDS Metme_0362 NC_015572.1 383466 384533 R TIGRFAM: hypothetical protein; KEGG: cyc:PCC7424_3022 hypothetical protein; hypothetical protein complement(383466..384533) Methylomonas methanica MC09 10670339 YP_004511310.1 CDS Metme_0363 NC_015572.1 384660 385211 R KEGG: mfa:Mfla_2213 hypothetical protein; hypothetical protein complement(384660..385211) Methylomonas methanica MC09 10670340 YP_004511311.1 CDS Metme_0364 NC_015572.1 385511 386032 R KEGG: bmd:BMD_3816 hypothetical protein; hypothetical protein complement(385511..386032) Methylomonas methanica MC09 10670341 YP_004511312.1 CDS Metme_0365 NC_015572.1 386058 387359 R KEGG: nhl:Nhal_0005 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase complement(386058..387359) Methylomonas methanica MC09 10670342 YP_004511313.1 CDS Metme_0366 NC_015572.1 387633 388166 D KEGG: mca:MCA2972 lipoprotein A domain-containing protein; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; rare lipoprotein A 387633..388166 Methylomonas methanica MC09 10670343 YP_004511314.1 CDS Metme_0367 NC_015572.1 388464 389714 D TIGRFAM: Diaminopimelate decarboxylase; KEGG: mca:MCA0858 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 388464..389714 Methylomonas methanica MC09 10670344 YP_004511315.1 CDS Metme_0368 NC_015572.1 389720 390547 D PFAM: Diaminopimelate epimerase; manually curated; TIGRFAM: Diaminopimelate epimerase; KEGG: mca:MCA0859 diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; diaminopimelate epimerase 389720..390547 Methylomonas methanica MC09 10670345 YP_004511316.1 CDS Metme_0369 NC_015572.1 390544 391230 D PFAM: Protein of unknown function DUF484; KEGG: mca:MCA0860 hypothetical protein; hypothetical protein 390544..391230 Methylomonas methanica MC09 10670346 YP_004511317.1 CDS Metme_0370 NC_015572.1 391233 392138 D TIGRFAM: Tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; KEGG: hch:HCH_00300 site-specific tyrosine recombinase XerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase xerC 391233..392138 Methylomonas methanica MC09 10670347 YP_004511318.1 CDS Metme_0372 NC_015572.1 399214 400734 R PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region; integrase catalytic subunit complement(399214..400734) Methylomonas methanica MC09 10670355 YP_004511319.1 CDS Metme_0373 NC_015572.1 400829 401329 D PFAM: Transposase IS3/IS911; KEGG: pna:Pnap_1740 transposase; transposase IS3/IS911 family protein 400829..401329 Methylomonas methanica MC09 10670356 YP_004511320.1 CDS Metme_0374 NC_015572.1 401326 402408 D PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit 401326..402408 Methylomonas methanica MC09 10670357 YP_004511321.1 CDS Metme_0376 NC_015572.1 403025 404140 D PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 403025..404140 Methylomonas methanica MC09 10670360 YP_004511322.1 CDS Metme_0377 NC_015572.1 404414 406048 R KEGG: ter:Tery_1084 phosphoglucomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucomutase complement(404414..406048) Methylomonas methanica MC09 10670361 YP_004511323.1 CDS Metme_0378 NC_015572.1 406135 406689 D PFAM: YkuD domain; KEGG: mca:MCA0606 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 406135..406689 Methylomonas methanica MC09 10670362 YP_004511324.1 CDS Metme_0379 NC_015572.1 406773 407051 D manually curated; KEGG: mca:MCA0605 lipoprotein; lipoprotein 406773..407051 Methylomonas methanica MC09 10670363 YP_004511325.1 CDS Metme_0380 NC_015572.1 407117 408064 R PFAM: YkuD domain; KEGG: mca:MCA0855 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(407117..408064) Methylomonas methanica MC09 10670364 YP_004511326.1 CDS Metme_0381 NC_015572.1 408064 408972 R KEGG: mca:MCA0854 recombination associated protein; HAMAP: Recombination-associated protein rdgC; PFAM: exonuclease, RdgC; Recombination-associated protein rdgC complement(408064..408972) Methylomonas methanica MC09 10670365 YP_004511327.1 CDS Metme_0382 NC_015572.1 409233 409412 D KEGG: nwa:Nwat_2272 hypothetical protein; hypothetical protein 409233..409412 Methylomonas methanica MC09 10670366 YP_004511328.1 CDS Metme_0383 NC_015572.1 409414 410016 D PFAM: Uncharacterised protein family UPF0307; KEGG: ttu:TERTU_3827 hypothetical protein; hypothetical protein 409414..410016 Methylomonas methanica MC09 10670367 YP_004511329.1 CDS Metme_0384 NC_015572.1 410020 410709 R PFAM: Glycosyl transferase, family 51; manually curated; TIGRFAM: Monofunctional biosynthetic peptidoglycan transglycosylase; KEGG: pap:PSPA7_0477 monofunctional biosynthetic peptidoglycan transglycosylase; HAMAP: Monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase complement(410020..410709) Methylomonas methanica MC09 10670368 YP_004511330.1 CDS Metme_0385 NC_015572.1 411213 412055 D PFAM: Peptidase M74, penicillin-insensitive murein endopeptidase; KEGG: oan:Oant_1334 penicillin-insensitive murein endopeptidase; peptidase U6 penicillin-insensitive murein endopeptidase 411213..412055 Methylomonas methanica MC09 10670369 YP_004511331.1 CDS Metme_0386 NC_015572.1 412215 412427 R PFAM: Protein of unknown function DUF1289; KEGG: saz:Sama_2102 hypothetical protein; hypothetical protein complement(412215..412427) Methylomonas methanica MC09 10670370 YP_004511332.1 CDS Metme_0387 NC_015572.1 412420 413361 R TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: vha:VIBHAR_00979 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF complement(412420..413361) Methylomonas methanica MC09 10670371 YP_004511333.1 CDS Metme_0388 NC_015572.1 413465 414457 D KEGG: wch:wcw_0148 DNA repair photolyase; DNA repair photolyase 413465..414457 Methylomonas methanica MC09 10670372 YP_004511334.1 CDS Metme_0389 NC_015572.1 414445 415158 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: wch:wcw_0147 hypothetical protein; short-chain dehydrogenase/reductase SDR 414445..415158 Methylomonas methanica MC09 10670373 YP_004511335.1 CDS Metme_0390 NC_015572.1 415163 416767 D PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; KEGG: sdl:Sdel_2168 TrkA-N domain protein; TrkA-N domain-containing protein 415163..416767 Methylomonas methanica MC09 10670374 YP_004511336.1 CDS Metme_0391 NC_015572.1 416764 417468 D PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: sdl:Sdel_2167 TrkA-N domain protein; TrkA-N domain-containing protein 416764..417468 Methylomonas methanica MC09 10670375 YP_004511337.1 CDS Metme_0392 NC_015572.1 417449 417958 D manually curated; HAMAP: Disulfide bond formation protein B; KEGG: mca:MCA3059 disulfide bond formation protein B; PFAM: Disulphide bond formation protein DsbB; disulfide bond formation protein B 417449..417958 Methylomonas methanica MC09 10670376 YP_004511338.1 CDS Metme_0393 NC_015572.1 418308 420524 D TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: mca:MCA2594 primosomal protein N`; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; primosomal protein N' 418308..420524 Methylomonas methanica MC09 10670377 YP_004511339.1 CDS Metme_0394 NC_015572.1 420629 421381 D KEGG: mbr:MONBRDRAFT_32645 hypothetical protein; hypothetical protein 420629..421381 Methylomonas methanica MC09 10670378 YP_004511340.1 CDS Metme_0395 NC_015572.1 421490 422026 R PFAM: NLP/P60; KEGG: mca:MCA2789 NLP/P60 family protein; NLP/P60 protein complement(421490..422026) Methylomonas methanica MC09 10670379 YP_004511341.1 CDS Metme_0396 NC_015572.1 422133 423221 R HAMAP: DNA polymerase IV; KEGG: aeh:Mlg_2775 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like; DNA polymerase IV complement(422133..423221) Methylomonas methanica MC09 10670380 YP_004511342.1 CDS Metme_0397 NC_015572.1 423225 423527 R KEGG: neu:NE0570 lipase; lipase complement(423225..423527) Methylomonas methanica MC09 10670381 YP_004511343.1 CDS Metme_0398 NC_015572.1 423532 424551 R PFAM: Uncharacterised conserved protein UCP029693; KEGG: mca:MCA0862 hypothetical protein; hypothetical protein complement(423532..424551) Methylomonas methanica MC09 10670382 YP_004511344.1 CDS Metme_0399 NC_015572.1 424647 424955 R KEGG: tkm:TK90_0203 protein of unknown function DUF709; HAMAP: YcgL domain; PFAM: YcgL domain; hypothetical protein complement(424647..424955) Methylomonas methanica MC09 10670383 YP_004511345.1 CDS Metme_0400 NC_015572.1 425047 425634 D PFAM: Abortive infection protein; KEGG: nhl:Nhal_0881 abortive infection protein; abortive infection protein 425047..425634 Methylomonas methanica MC09 10670384 YP_004511346.1 CDS Metme_0401 NC_015572.1 425646 426113 D hypothetical protein 425646..426113 Methylomonas methanica MC09 10670385 YP_004511347.1 CDS Metme_0402 NC_015572.1 426206 427672 D SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: mca:MCA0291 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; inosine-5'-monophosphate dehydrogenase 426206..427672 Methylomonas methanica MC09 10670386 YP_004511348.1 CDS Metme_0403 NC_015572.1 427732 428712 D PFAM: Methyltransferase type 11; KEGG: mpo:Mpop_1471 methyltransferase type 11; type 11 methyltransferase 427732..428712 Methylomonas methanica MC09 10670387 YP_004511349.1 CDS Metme_0404 NC_015572.1 428817 430403 D PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; NAD+ synthase; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: tgr:Tgr7_1036 GMP synthase; GMP synthase 428817..430403 Methylomonas methanica MC09 10670388 YP_004511350.1 CDS Metme_0405 NC_015572.1 430550 430759 D KEGG: swo:Swol_1551 hypothetical protein; TIGRFAM: Addiction module component, CHP02574; PFAM: Addiction module component, CHP02574; addiction module protein 430550..430759 Methylomonas methanica MC09 10670389 YP_004511351.1 CDS Metme_0406 NC_015572.1 430756 431049 D PFAM: Plasmid stabilisation system; KEGG: pph:Ppha_1705 plasmid stabilization system; plasmid stabilization system 430756..431049 Methylomonas methanica MC09 10670390 YP_004511352.1 CDS Metme_0407 NC_015572.1 431199 432266 D TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: cja:CJA_0530 A / G specific adenine glycosylase; SMART: HhH-GPD domain; A/G-specific adenine glycosylase 431199..432266 Methylomonas methanica MC09 10670391 YP_004511353.1 CDS Metme_0408 NC_015572.1 432250 432522 D KEGG: mca:MCA0856 hypothetical protein; HAMAP: Fe(II) trafficking protein YggX; PFAM: Fe(II) trafficking protein YggX; Fe(2+)-trafficking protein 432250..432522 Methylomonas methanica MC09 10670392 YP_004511354.1 CDS Metme_0409 NC_015572.1 432828 433535 D hypothetical protein 432828..433535 Methylomonas methanica MC09 10670393 YP_004511355.1 CDS Metme_0410 NC_015572.1 434205 435437 D PFAM: Glycosyl transferase, group 1; KEGG: mca:MCA1168 colanic acid biosynthesis glycosyl transferase; group 1 glycosyl transferase 434205..435437 Methylomonas methanica MC09 10670394 YP_004511356.1 CDS Metme_0411 NC_015572.1 435487 436641 D PFAM: Glycosyl transferase, group 1; KEGG: caa:Caka_1988 glycosyl transferase group 1; group 1 glycosyl transferase 435487..436641 Methylomonas methanica MC09 10670395 YP_004511357.1 CDS Metme_0412 NC_015572.1 436653 437198 D KEGG: pph:Ppha_0561 acetyltransferase; hypothetical protein 436653..437198 Methylomonas methanica MC09 10670396 YP_004511358.1 CDS Metme_0413 NC_015572.1 437332 438336 D PFAM: Glycosyl transferase, group 1; KEGG: sua:Saut_1559 glycosyl transferase group 1; group 1 glycosyl transferase 437332..438336 Methylomonas methanica MC09 10670397 YP_004511359.1 CDS Metme_0414 NC_015572.1 438333 439793 D PFAM: Polysaccharide biosynthesis protein; KEGG: gdj:Gdia_0777 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 438333..439793 Methylomonas methanica MC09 10670398 YP_004511360.1 CDS Metme_0415 NC_015572.1 439816 441090 D KEGG: cpy:Cphy_1208 O-antigen polymerase; hypothetical protein 439816..441090 Methylomonas methanica MC09 10670399 YP_004511361.1 CDS Metme_0416 NC_015572.1 441156 442085 D KEGG: cyc:PCC7424_0611 exopolysaccharide biosynthesis protein-like protein; exopolysaccharide biosynthesis protein-like protein 441156..442085 Methylomonas methanica MC09 10670400 YP_004511362.1 CDS Metme_0417 NC_015572.1 442238 443113 D KEGG: aap:NT05HA_0643 hypothetical protein; hypothetical protein 442238..443113 Methylomonas methanica MC09 10670401 YP_004511363.1 CDS Metme_0418 NC_015572.1 443408 445030 D KEGG: rpe:RPE_1095 eight transmembrane protein EpsH; TIGRFAM: Methanolan biosynthesis EpsI; Exosortase, EpsH; PFAM: Exosortase EpsH-related; EpsI family protein 443408..445030 Methylomonas methanica MC09 10670402 YP_004511364.1 CDS Metme_0419 NC_015572.1 445468 447156 D PFAM: Glycosyl transferase, family 4, conserved region; KEGG: nde:NIDE2404 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; glycosyl transferase family protein 445468..447156 Methylomonas methanica MC09 10670403 YP_004511365.1 CDS Metme_0420 NC_015572.1 447541 448266 D TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; KEGG: mca:MCA1094 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core; orotidine 5'-phosphate decarboxylase 447541..448266 Methylomonas methanica MC09 10670404 YP_004511366.1 CDS Metme_0421 NC_015572.1 448320 448898 D HAMAP: Shikimate kinase; KEGG: mca:MCA0330 shikimate kinase; PFAM: Shikimate kinase; shikimate kinase 448320..448898 Methylomonas methanica MC09 10670405 YP_004511367.1 CDS Metme_0422 NC_015572.1 448879 449961 D PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: mca:MCA0331 3-dehydroquinate synthase; 3-dehydroquinate synthase 448879..449961 Methylomonas methanica MC09 10670406 YP_004511368.1 CDS Metme_0423 NC_015572.1 449951 451537 D KEGG: pmy:Pmen_0549 sporulation domain-containing protein; PFAM: Sporulation/cell division region, bacteria; SMART: ATPase, AAA+ type, core; sporulation domain-containing protein 449951..451537 Methylomonas methanica MC09 10670407 YP_004511369.1 CDS Metme_0424 NC_015572.1 451682 452752 D PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: mca:MCA0332 uroporphyrinogen decarboxylase; uroporphyrinogen decarboxylase 451682..452752 Methylomonas methanica MC09 10670408 YP_004511370.1 CDS Metme_0425 NC_015572.1 452749 453180 D hypothetical protein 452749..453180 Methylomonas methanica MC09 10670409 YP_004511371.1 CDS Metme_0427 NC_015572.1 454649 455155 D KEGG: mms:mma_1233 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 454649..455155 Methylomonas methanica MC09 10670412 YP_004511372.1 CDS Metme_0428 NC_015572.1 455162 456127 D PFAM: FecR protein; KEGG: mms:mma_1214 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR 455162..456127 Methylomonas methanica MC09 10670413 YP_004511373.1 CDS Metme_0429 NC_015572.1 456159 456545 R PFAM: PemK-like protein; KEGG: gur:Gura_1479 transcriptional modulator of MazE/toxin, MazF; transcriptional modulator of MazE/toxin MazF complement(456159..456545) Methylomonas methanica MC09 10670414 YP_004511374.1 CDS Metme_0430 NC_015572.1 456536 456790 R PFAM: Transcription regulator AbrB/SpoV, predicted; KEGG: gur:Gura_1478 transcriptional regulator/antitoxin, MazE; SpoVT/AbrB domain-containing protein complement(456536..456790) Methylomonas methanica MC09 10670415 YP_004511375.1 CDS Metme_0431 NC_015572.1 456869 457072 D hypothetical protein 456869..457072 Methylomonas methanica MC09 10670416 YP_004511376.1 CDS Metme_0432 NC_015572.1 457169 459604 D KEGG: neu:NE0546 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 457169..459604 Methylomonas methanica MC09 10670417 YP_004511377.1 CDS Metme_0433 NC_015572.1 459911 461094 D KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein join(459911..460174,460174..461094) Methylomonas methanica MC09 10670418 YP_004511378.1 CDS Metme_0434 NC_015572.1 461098 461574 R KEGG: ppd:Ppro_1855 hypothetical protein; hypothetical protein complement(461098..461574) Methylomonas methanica MC09 10670419 YP_004511379.1 CDS Metme_0435 NC_015572.1 461771 462283 D KEGG: dar:Daro_1832 sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 461771..462283 Methylomonas methanica MC09 10670420 YP_004511380.1 CDS Metme_0436 NC_015572.1 462558 462788 D KEGG: gpb:HDN1F_07120 hypothetical protein; hypothetical protein 462558..462788 Methylomonas methanica MC09 10670421 YP_004511381.1 CDS Metme_0437 NC_015572.1 462785 462931 D hypothetical protein 462785..462931 Methylomonas methanica MC09 10670422 YP_004511382.1 CDS Metme_0438 NC_015572.1 463196 464668 R KEGG: cak:Caul_1086 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(463196..464668) Methylomonas methanica MC09 10670423 YP_004511383.1 CDS Metme_0439 NC_015572.1 464665 467862 R KEGG: noc:Noc_1827 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(464665..467862) Methylomonas methanica MC09 10670424 YP_004511384.1 CDS Metme_0440 NC_015572.1 467866 469113 R KEGG: nwa:Nwat_1286 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(467866..469113) Methylomonas methanica MC09 10670425 YP_004511385.1 CDS Metme_0441 NC_015572.1 469219 469833 D PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pmy:Pmen_3352 TetR family transcriptional regulator; TetR family transcriptional regulator 469219..469833 Methylomonas methanica MC09 10670426 YP_004511386.1 CDS Metme_0442 NC_015572.1 469858 470535 D hypothetical protein 469858..470535 Methylomonas methanica MC09 10670427 YP_004511387.1 CDS Metme_0443 NC_015572.1 470544 471464 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: slt:Slit_0543 OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(470544..471464) Methylomonas methanica MC09 10670428 YP_004511388.1 CDS Metme_0444 NC_015572.1 471471 472319 R KEGG: hse:Hsero_2986 flagellar motor component protein; TIGRFAM: flagellar motor stator protein MotA; PFAM: MotA/TolQ/ExbB proton channel; flagellar motor stator protein MotA complement(471471..472319) Methylomonas methanica MC09 10670429 YP_004511389.1 CDS Metme_0445 NC_015572.1 472415 475099 R TIGRFAM: Hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: nmu:Nmul_A1652 hypothetical protein; hopanoid biosynthesis associated RND transporter like protein HpnN complement(472415..475099) Methylomonas methanica MC09 10670430 YP_004511390.1 CDS Metme_0446 NC_015572.1 475102 476076 R KEGG: CACA family Na+/Ca+ antiporter; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter complement(475102..476076) Methylomonas methanica MC09 10670431 YP_004511391.1 CDS Metme_0447 NC_015572.1 476147 476974 R TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: dar:Daro_3911 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA; UDP-diphosphatase complement(476147..476974) Methylomonas methanica MC09 10670432 YP_004511392.1 CDS Metme_0448 NC_015572.1 477680 478795 D PFAM: PEP-CTERM bacterial; KEGG: tmz:Tmz1t_2669 protein of unknown function DUF1555; hypothetical protein 477680..478795 Methylomonas methanica MC09 10670433 YP_004511393.1 CDS Metme_0449 NC_015572.1 478806 481454 D PFAM: Dockerin type 1; Thrombospondin, type 3-like repeat; KEGG: aba:Acid345_4639 hypothetical protein; Dockerin type 1 protein 478806..481454 Methylomonas methanica MC09 10670434 YP_004511394.1 CDS Metme_0450 NC_015572.1 481543 482142 D TIGRFAM: variant PEP-CTERM exosortase signal; PFAM: PEP-CTERM bacterial; variant PEP-CTERM exosortase signal 481543..482142 Methylomonas methanica MC09 10670435 YP_004511395.1 CDS Metme_0451 NC_015572.1 482199 483914 R HAMAP: Phosphoglucose isomerase (PGI); KEGG: cts:Ctha_1613 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase complement(482199..483914) Methylomonas methanica MC09 10670436 YP_004511396.1 CDS Metme_0452 NC_015572.1 484121 484714 D KEGG: mca:MCA2130 hypothetical protein; hypothetical protein 484121..484714 Methylomonas methanica MC09 10670437 YP_004511397.1 CDS Metme_0453 NC_015572.1 484860 485780 D PFAM: Multicopper oxidase, type 2; KEGG: mca:MCA2128 hypothetical protein; multicopper oxidase type 2 484860..485780 Methylomonas methanica MC09 10670438 YP_004511398.1 CDS Metme_0454 NC_015572.1 485843 486268 D KEGG: mca:MCA0636 hypothetical protein; hypothetical protein 485843..486268 Methylomonas methanica MC09 10670439 YP_004511399.1 CDS Metme_0455 NC_015572.1 486286 487062 D KEGG: nmu:Nmul_A2658 hypothetical protein; hypothetical protein 486286..487062 Methylomonas methanica MC09 10670440 YP_004511400.1 CDS Metme_0456 NC_015572.1 487171 489978 D TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: alv:Alvin_2106 valyl-tRNA synthetase; valyl-tRNA synthetase 487171..489978 Methylomonas methanica MC09 10670441 YP_004511401.1 CDS Metme_0457 NC_015572.1 489979 491421 D PFAM: Metal-dependent hydrolase HDOD; KEGG: alv:Alvin_2068 signal transduction protein; signal transduction protein 489979..491421 Methylomonas methanica MC09 10670442 YP_004511402.1 CDS Metme_0458 NC_015572.1 491425 492222 D KEGG: dar:Daro_0555 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 491425..492222 Methylomonas methanica MC09 10670443 YP_004511403.1 CDS Metme_0459 NC_015572.1 492332 494041 D KEGG: nhl:Nhal_3847 type IV-A pilus assembly ATPase PilB; TIGRFAM: ATPase, type IV, pilus assembly, PilB; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; type IV-A pilus assembly ATPase PilB 492332..494041 Methylomonas methanica MC09 10670444 YP_004511404.1 CDS Metme_0460 NC_015572.1 494045 495265 D PFAM: Type II secretion system F domain; KEGG: mca:MCA2095 type IV pilin biogenesis protein PilC; type II secretion system F domain-containing protein 494045..495265 Methylomonas methanica MC09 10670445 YP_004511405.1 CDS Metme_0461 NC_015572.1 495347 496213 D KEGG: nhl:Nhal_3849 prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV; prepilin peptidase 495347..496213 Methylomonas methanica MC09 10670446 YP_004511406.1 CDS Metme_0462 NC_015572.1 496217 496828 D manually curated; KEGG: etr:ETAE_0650 dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; dephospho-CoA kinase 496217..496828 Methylomonas methanica MC09 10670447 YP_004511407.1 CDS Metme_0463 NC_015572.1 496825 497595 D PFAM: Protein of unknown function DUF1342; KEGG: mca:MCA2091 hypothetical protein; hypothetical protein 496825..497595 Methylomonas methanica MC09 10670448 YP_004511408.1 CDS Metme_0464 NC_015572.1 497595 497798 D KEGG: sbl:Sbal_3924 hypothetical protein; HAMAP: Uncharacterised protein family, zinc-binding; PFAM: Uncharacterised protein family, zinc-binding; hypothetical protein 497595..497798 Methylomonas methanica MC09 10670449 YP_004511409.1 CDS Metme_0465 NC_015572.1 497808 498743 R KEGG: pfo:Pfl01_4425 hypothetical protein; TIGRFAM: Mutator MutT protein; PFAM: Thiamine monophosphate synthase; NUDIX hydrolase domain; mutator MutT protein complement(497808..498743) Methylomonas methanica MC09 10670450 YP_004511410.1 CDS Metme_0466 NC_015572.1 498744 499958 R PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: maq:Maqu_2442 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; arginine biosynthesis bifunctional protein ArgJ complement(498744..499958) Methylomonas methanica MC09 10670451 YP_004511411.1 CDS Metme_0467 NC_015572.1 499979 500203 R PFAM: SirA-like; KEGG: abo:ABO_2263 hypothetical protein; SirA-like domain-containing protein complement(499979..500203) Methylomonas methanica MC09 10670452 YP_004511412.1 CDS Metme_0468 NC_015572.1 500200 501243 R KEGG: kko:Kkor_2282 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase complement(500200..501243) Methylomonas methanica MC09 10670453 YP_004511413.1 CDS Metme_0469 NC_015572.1 501377 502543 D TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: noc:Noc_1361 pilus retraction protein PilT; SMART: ATPase, AAA+ type, core; twitching motility protein 501377..502543 Methylomonas methanica MC09 10670454 YP_004511414.1 CDS Metme_0470 NC_015572.1 502559 503593 R TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; KEGG: lhk:LHK_00043 fructose-1,6-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase complement(502559..503593) Methylomonas methanica MC09 10670455 YP_004511415.1 CDS Metme_0471 NC_015572.1 504056 504529 R hypothetical protein complement(504056..504529) Methylomonas methanica MC09 10670456 YP_004511416.1 CDS Metme_0472 NC_015572.1 504794 505114 R KEGG: pag:PLES_12181 hypothetical protein; hypothetical protein complement(504794..505114) Methylomonas methanica MC09 10670457 YP_004511417.1 CDS Metme_0473 NC_015572.1 505124 505276 R hypothetical protein complement(505124..505276) Methylomonas methanica MC09 10670458 YP_004511418.1 CDS Metme_0474 NC_015572.1 505632 508019 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: app:CAP2UW1_0594 TonB-dependent receptor; TonB-dependent receptor 505632..508019 Methylomonas methanica MC09 10670459 YP_004511419.1 CDS Metme_0475 NC_015572.1 508286 508423 R hypothetical protein complement(508286..508423) Methylomonas methanica MC09 10670460 YP_004511420.1 CDS Metme_0476 NC_015572.1 508949 509998 D KEGG: bmr:BMI_II54 threonine aldolase, low-specificity; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 508949..509998 Methylomonas methanica MC09 10670461 YP_004511421.1 CDS Metme_0477 NC_015572.1 510053 513367 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; Extracellular ligand-binding receptor; BLUF; KEGG: alv:Alvin_1044 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(510053..513367) Methylomonas methanica MC09 10670462 YP_004511422.1 CDS Metme_0478 NC_015572.1 513500 513979 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: slt:Slit_2539 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(513500..513979) Methylomonas methanica MC09 10670463 YP_004511423.1 CDS Metme_0479 NC_015572.1 513979 514725 R PFAM: Protein of unknown function DUF45; KEGG: mca:MCA0402 hypothetical protein; hypothetical protein complement(513979..514725) Methylomonas methanica MC09 10670464 YP_004511424.1 CDS Metme_0480 NC_015572.1 514709 515119 R PFAM: Globin, truncated bacterial-like; KEGG: mca:MCA1878 hypothetical protein; globin complement(514709..515119) Methylomonas methanica MC09 10670465 YP_004511425.1 CDS Metme_0481 NC_015572.1 515243 515908 D PFAM: Uncharacterised protein family UPF0005; KEGG: azo:azo0911 carrier/transport protein; hypothetical protein 515243..515908 Methylomonas methanica MC09 10670466 YP_004511426.1 CDS Metme_0482 NC_015572.1 515974 516375 R KEGG: mca:MCA0747 rare lipoprotein A, TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; rare lipoprotein A complement(515974..516375) Methylomonas methanica MC09 10670467 YP_004511427.1 CDS Metme_0483 NC_015572.1 516569 516931 R PFAM: Invasion gene expression up-regulator, SirB; KEGG: ilo:IL0922 hypothetical protein; Invasion gene expression up-regulator SirB complement(516569..516931) Methylomonas methanica MC09 10670468 YP_004511428.1 CDS Metme_0484 NC_015572.1 516944 518227 R KEGG: dat:HRM2_33280 TRAP-type C4-dicarboxylate transport system, large permease component; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(516944..518227) Methylomonas methanica MC09 10670469 YP_004511429.1 CDS Metme_0485 NC_015572.1 518224 518712 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: abo:ABO_0689 TRAP C4-dicarboxylate transporter; tripartite AtP-independent periplasmic transporter subunit DctQ complement(518224..518712) Methylomonas methanica MC09 10670470 YP_004511430.1 CDS Metme_0486 NC_015572.1 518718 519725 R PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: slt:Slit_0817 extracellular solute-binding protein, family 7; family 7 extracellular solute-binding protein complement(518718..519725) Methylomonas methanica MC09 10670471 YP_004511431.1 CDS Metme_0487 NC_015572.1 519742 520626 R KEGG: slt:Slit_0818 hypothetical protein; hypothetical protein complement(519742..520626) Methylomonas methanica MC09 10670472 YP_004511432.1 CDS Metme_0488 NC_015572.1 520610 522106 R KEGG: nhl:Nhal_0744 protein of unknown function DUF344; TIGRFAM: polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase 2; polyphosphate:AMP phosphotransferase complement(520610..522106) Methylomonas methanica MC09 10670473 YP_004511433.1 CDS Metme_0489 NC_015572.1 522309 522506 D hypothetical protein 522309..522506 Methylomonas methanica MC09 10670474 YP_004511434.1 CDS Metme_0490 NC_015572.1 522695 524974 D KEGG: mca:MCA1032 S1 RNA-binding domain-containing protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold; Tex-like protein 522695..524974 Methylomonas methanica MC09 10670475 YP_004511435.1 CDS Metme_0491 NC_015572.1 525156 525545 D KEGG: mca:MCA2460 hypothetical protein; hypothetical protein 525156..525545 Methylomonas methanica MC09 10670476 YP_004511436.1 CDS Metme_0492 NC_015572.1 525596 529045 R PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: ddd:Dda3937_01937 exonuclease, dsDNA, ATP-dependent; SMC domain-containing protein complement(525596..529045) Methylomonas methanica MC09 10670477 YP_004511437.1 CDS Metme_0493 NC_015572.1 529715 531010 R PFAM: Amidohydrolase 1; KEGG: nmu:Nmul_A0963 amidohydrolase; amidohydrolase complement(529715..531010) Methylomonas methanica MC09 10670478 YP_004511438.1 CDS Metme_0494 NC_015572.1 531382 532245 R PFAM: ATPase, F1 complex, gamma subunit; KEGG: nhl:Nhal_1904 alternate F1F0 ATPase, F1 subunit gamma; H+transporting two-sector ATPase subunit gamma complement(531382..532245) Methylomonas methanica MC09 10670479 YP_004511439.1 CDS Metme_0495 NC_015572.1 532223 533746 R TIGRFAM: Alternate ATPase, F1 complex, alpha subunit; ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: nhl:Nhal_1905 alternate F1F0 ATPase, F1 subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha complement(532223..533746) Methylomonas methanica MC09 10670480 YP_004511440.1 CDS Metme_0496 NC_015572.1 533740 534504 R TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: nhl:Nhal_1906 alternate F1F0 ATPase, F0 subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b complement(533740..534504) Methylomonas methanica MC09 10670481 YP_004511441.1 CDS Metme_0497 NC_015572.1 534508 534795 R TIGRFAM: Alternate ATPase, F0 complex, subunit C; ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: nhl:Nhal_1907 alternate F1F0 ATPase, F0 subunit C; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c complement(534508..534795) Methylomonas methanica MC09 10670482 YP_004511442.1 CDS Metme_0498 NC_015572.1 534797 535489 R TIGRFAM: Alternate ATPase, F0 complex, subunit A; ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: nhl:Nhal_1908 alternate F1F0 ATPase, F0 subunit A; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a complement(534797..535489) Methylomonas methanica MC09 10670483 YP_004511443.1 CDS Metme_0499 NC_015572.1 535486 535791 R TIGRFAM: ATPase, F1/F0 complex, subunit 2, Methanosarcina type; KEGG: nhl:Nhal_2230 F1/F0 ATPase, Methanosarcina type, subunit 2; F1/F0 ATPase subunit 2 complement(535486..535791) Methylomonas methanica MC09 10670484 YP_004511444.1 CDS Metme_0500 NC_015572.1 535763 536077 R KEGG: pna:Pnap_2334 F0F1-ATPase subunit, TIGRFAM: F0F1-ATPase subunit, PFAM: F0F1-ATPase subunit; F0F1-ATPase subunit complement(535763..536077) Methylomonas methanica MC09 10670485 YP_004511445.1 CDS Metme_0501 NC_015572.1 536082 536468 R KEGG: nhl:Nhal_1950 ATP synthase F1, epsilon subunit; TIGRFAM: alternate F1F0 ATPase, F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; alternate F1F0 ATPase, F1 subunit epsilon complement(536082..536468) Methylomonas methanica MC09 10670486 YP_004511446.1 CDS Metme_0502 NC_015572.1 536470 537906 R SMART: ATPase, AAA+ type, core; TIGRFAM: Alternate ATPase, F1 complex, beta subunit; ATPase, F1 complex, beta subunit; KEGG: syp:SYNPCC7002_G0144 F0F1 ATP synthase subunit beta; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta complement(536470..537906) Methylomonas methanica MC09 10670487 YP_004511447.1 CDS Metme_0503 NC_015572.1 538042 538716 R PFAM: Transaldolase; KEGG: vpa:VPA1569 fructose-6-phosphate aldolase; Transaldolase complement(538042..538716) Methylomonas methanica MC09 10670488 YP_004511448.1 CDS Metme_0504 NC_015572.1 538852 540033 D KEGG: nhl:Nhal_2920 hypothetical protein; hypothetical protein 538852..540033 Methylomonas methanica MC09 10670489 YP_004511449.1 CDS Metme_0505 NC_015572.1 540353 540481 D hypothetical protein 540353..540481 Methylomonas methanica MC09 10670490 YP_004511450.1 CDS Metme_0506 NC_015572.1 540790 540990 R hypothetical protein complement(540790..540990) Methylomonas methanica MC09 10670491 YP_004511451.1 CDS Metme_0507 NC_015572.1 541285 542757 R KEGG: alv:Alvin_0399 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(541285..542757) Methylomonas methanica MC09 10670492 YP_004511452.1 CDS Metme_0508 NC_015572.1 542900 543589 R TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; KEGG: mca:MCA1532 tRNA (guanine-N(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(542900..543589) Methylomonas methanica MC09 10670493 YP_004511453.1 CDS Metme_0509 NC_015572.1 543671 543991 R hypothetical protein complement(543671..543991) Methylomonas methanica MC09 10670494 YP_004511454.1 CDS Metme_0510 NC_015572.1 543993 544187 R PFAM: BFD-like [2Fe-2S]-binding region; KEGG: mep:MPQ_0404 bfd domain protein (2Fe-2S)-binding domain protein; BFD (2Fe-2S)-binding domain-containing protein complement(543993..544187) Methylomonas methanica MC09 10670495 YP_004511455.1 CDS Metme_0511 NC_015572.1 544425 545402 R TIGRFAM: ThiS, thiamine-biosynthesis; HAMAP: Thiazole biosynthesis; KEGG: mca:MCA1077 bifunctional sulfur carrier protein/thiazole synthase; PFAM: Thiazole biosynthesis; ThiamineS; thiazole synthase complement(544425..545402) Methylomonas methanica MC09 10670496 YP_004511456.1 CDS Metme_0512 NC_015572.1 545399 546484 R TIGRFAM: DHAP synthase, class 1; KEGG: mca:MCA1076 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(545399..546484) Methylomonas methanica MC09 10670497 YP_004511457.1 CDS Metme_0513 NC_015572.1 546591 547385 D PFAM: Protein of unknown function DUF155; KEGG: gpb:HDN1F_14140 hypothetical protein; hypothetical protein 546591..547385 Methylomonas methanica MC09 10670498 YP_004511458.1 CDS Metme_0514 NC_015572.1 547531 549204 R PFAM: Cytochrome c, class I; KEGG: hch:HCH_00662 hypothetical protein; cytochrome c class I complement(547531..549204) Methylomonas methanica MC09 10670499 YP_004511459.1 CDS Metme_0515 NC_015572.1 550054 551237 D KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein join(550054..550317,550317..551237) Methylomonas methanica MC09 10670500 YP_004511460.1 CDS Metme_0516 NC_015572.1 551355 552653 D PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: aca:ACP_3214 group II intron-encoded maturase; RNA-directed DNA polymerase 551355..552653 Methylomonas methanica MC09 10670501 YP_004511461.1 CDS Metme_0517 NC_015572.1 552781 553281 D PFAM: Transposase IS3/IS911; KEGG: pna:Pnap_1740 transposase; transposase IS3/IS911 family protein 552781..553281 Methylomonas methanica MC09 10670502 YP_004511462.1 CDS Metme_0518 NC_015572.1 553278 554360 D PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit 553278..554360 Methylomonas methanica MC09 10670503 YP_004511463.1 CDS Metme_0519 NC_015572.1 555107 556732 R PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; TIGRFAM: Sulphate adenylyltransferase, large subunit; HAMAP: Sulfate adenylyltransferase subunit 1; KEGG: mca:MCA2628 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; sulfate adenylyltransferase subunit 1 complement(555107..556732) Methylomonas methanica MC09 10670504 YP_004511464.1 CDS Metme_0520 NC_015572.1 556771 557679 R PFAM: Phosphoadenosine phosphosulphate reductase; TIGRFAM: Sulphate adenylyltransferase, small subunit; HAMAP: Sulfate adenylyltransferase subunit 2; KEGG: cja:CJA_2122 sulfate adenylyltransferase subunit 2; sulfate adenylyltransferase subunit 2 complement(556771..557679) Methylomonas methanica MC09 10670505 YP_004511465.1 CDS Metme_0521 NC_015572.1 557802 559361 R PFAM: Sulphate transporter; KEGG: mca:MCA1443 sulfate transporter family protein; sulfate transporter complement(557802..559361) Methylomonas methanica MC09 10670506 YP_004511466.1 CDS Metme_0522 NC_015572.1 559396 560031 R KEGG: mca:MCA1442 carbonic anhydrase; PFAM: Carbonic anhydrase; carbonate dehydratase complement(559396..560031) Methylomonas methanica MC09 10670507 YP_004511467.1 CDS Metme_0523 NC_015572.1 560155 561711 R TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: nhl:Nhal_2893 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase subunit M complement(560155..561711) Methylomonas methanica MC09 10670508 YP_004511468.1 CDS Metme_0524 NC_015572.1 561704 563242 R TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: noc:Noc_1249 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase subunit M complement(561704..563242) Methylomonas methanica MC09 10670509 YP_004511469.1 CDS Metme_0525 NC_015572.1 563239 564816 R KEGG: mca:MCA0513 NADH ubiquinone/plastoquinone complex subunit, PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) complement(563239..564816) Methylomonas methanica MC09 10670510 YP_004511470.1 CDS Metme_0526 NC_015572.1 564816 568001 R KEGG: mca:MCA0512 hypothetical protein; HAMAP: UPF0753 protein; PFAM: Protein of unknown function DUF2309; hypothetical protein complement(564816..568001) Methylomonas methanica MC09 10670511 YP_004511471.1 CDS Metme_0527 NC_015572.1 567998 569470 R TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: nhl:Nhal_2897 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase subunit M complement(567998..569470) Methylomonas methanica MC09 10670512 YP_004511472.1 CDS Metme_0528 NC_015572.1 569779 570243 D TIGRFAM: Conserved hypothetical protein CHP00246; HAMAP: Ribosomal RNA large subunit methyltransferase H; KEGG: mca:MCA0377 rRNA large subunit methyltransferase; PFAM: SPOUT methyltransferase, predicted; ribosomal RNA large subunit methyltransferase H 569779..570243 Methylomonas methanica MC09 10670513 YP_004511473.1 CDS Metme_0529 NC_015572.1 570248 570823 D TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: cja:CJA_2814 septum formation protein Maf; PFAM: Maf-like protein; Septum formation protein Maf 570248..570823 Methylomonas methanica MC09 10670514 YP_004511474.1 CDS Metme_0530 NC_015572.1 570820 572274 D KEGG: mca:MCA0379 ribonuclease G; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family 570820..572274 Methylomonas methanica MC09 10670515 YP_004511475.1 CDS Metme_0531 NC_015572.1 572287 576081 D TIGRFAM: Conserved hypothetical protein CHP02099; KEGG: mca:MCA0380 hypothetical protein; hypothetical protein 572287..576081 Methylomonas methanica MC09 10670516 YP_004511476.1 CDS Metme_0532 NC_015572.1 576146 576964 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mca:MCA0381 carbon-nitrogen family hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 576146..576964 Methylomonas methanica MC09 10670517 YP_004511477.1 CDS Metme_0533 NC_015572.1 576970 577557 D hypothetical protein 576970..577557 Methylomonas methanica MC09 10670518 YP_004511478.1 CDS Metme_0534 NC_015572.1 577567 578055 R KEGG: mca:MCA2730 molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; PFAM: Molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C complement(577567..578055) Methylomonas methanica MC09 10670519 YP_004511479.1 CDS Metme_0535 NC_015572.1 578106 578339 D PFAM: ThiamineS; KEGG: tgr:Tgr7_2951 molybdopterin converting factor, subunit 1; sulfur transfer protein ThiS 578106..578339 Methylomonas methanica MC09 10670520 YP_004511480.1 CDS Metme_0536 NC_015572.1 578341 578799 D PFAM: Molybdopterin biosynthesis MoaE; KEGG: tgr:Tgr7_2952 molybdopterin biosynthesis MoaE protein; molybdopterin biosynthesis MoaE protein 578341..578799 Methylomonas methanica MC09 10670521 YP_004511481.1 CDS Metme_0537 NC_015572.1 578787 578903 R hypothetical protein complement(578787..578903) Methylomonas methanica MC09 10670522 YP_004511482.1 CDS Metme_0538 NC_015572.1 578890 579372 R KEGG: vcj:VCD_002404 lipoprotein; hypothetical protein complement(578890..579372) Methylomonas methanica MC09 10670523 YP_004511483.1 CDS Metme_0539 NC_015572.1 579629 580714 R KEGG: nwa:Nwat_0602 hypothetical protein; hypothetical protein complement(579629..580714) Methylomonas methanica MC09 10670524 YP_004511484.1 CDS Metme_0540 NC_015572.1 580718 582343 R KEGG: mca:MCA0969 NAD(+) synthetase; TIGRFAM: NAD+ synthase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase complement(580718..582343) Methylomonas methanica MC09 10670525 YP_004511485.1 CDS Metme_0541 NC_015572.1 582354 583223 R TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: tgr:Tgr7_0810 succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding; succinyl-CoA synthetase subunit alpha complement(582354..583223) Methylomonas methanica MC09 10670526 YP_004511486.1 CDS Metme_0542 NC_015572.1 583220 584389 R PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: mca:MCA0967 succinyl-CoA synthase, beta subunit; succinyl-CoA ligase subunit beta complement(583220..584389) Methylomonas methanica MC09 10670527 YP_004511487.1 CDS Metme_0543 NC_015572.1 584476 586101 D KEGG: cja:CJA_3208 sensor kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; multi-sensor signal transduction histidine kinase 584476..586101 Methylomonas methanica MC09 10670528 YP_004511488.1 CDS Metme_0544 NC_015572.1 586101 587447 D KEGG: nhl:Nhal_0598 sigma-54 factor interaction domain-containing protein; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator 586101..587447 Methylomonas methanica MC09 10670529 YP_004511489.1 CDS Metme_0545 NC_015572.1 587521 588015 R KEGG: mca:MCA0965 hypothetical protein; hypothetical protein complement(587521..588015) Methylomonas methanica MC09 10670530 YP_004511490.1 CDS Metme_0546 NC_015572.1 588178 590022 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: dak:DaAHT2_0342 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; response regulator receiver modulated diguanylate cyclase/phosphodiesterase complement(588178..590022) Methylomonas methanica MC09 10670531 YP_004511491.1 CDS Metme_0547 NC_015572.1 590211 591056 D PFAM: Metal-dependent hydrolase HDOD; KEGG: dak:DaAHT2_0343 signal transduction protein; signal transduction protein 590211..591056 Methylomonas methanica MC09 10670532 YP_004511492.1 CDS Metme_0548 NC_015572.1 591399 592886 D PFAM: Phosphate-selective porin O/P; KEGG: nmu:Nmul_A0898 phosphate-selective porin O and P; phosphate-selective porin O and P 591399..592886 Methylomonas methanica MC09 10670533 YP_004511493.1 CDS Metme_0549 NC_015572.1 592993 594534 D KEGG: rce:RC1_1861 hypothetical protein; hypothetical protein 592993..594534 Methylomonas methanica MC09 10670534 YP_004511494.1 CDS Metme_0550 NC_015572.1 594518 595822 R PFAM: Polysaccharide biosynthesis protein; KEGG: cyn:Cyan7425_3797 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(594518..595822) Methylomonas methanica MC09 10670535 YP_004511495.1 CDS Metme_0551 NC_015572.1 595926 597218 R KEGG: cyn:Cyan7425_3797 polysaccharide biosynthesis protein; manually curated; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(595926..597218) Methylomonas methanica MC09 10670536 YP_004511496.1 CDS Metme_0552 NC_015572.1 597684 598379 D TIGRFAM: Aquaporin; HAMAP: Aquaporin Z; KEGG: mms:mma_2544 aquaporin Z; PFAM: Major intrinsic protein; aquaporin Z 597684..598379 Methylomonas methanica MC09 10670537 YP_004511497.1 CDS Metme_0553 NC_015572.1 598461 599954 R TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: nhl:Nhal_2215 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(598461..599954) Methylomonas methanica MC09 10670538 YP_004511498.1 CDS Metme_0554 NC_015572.1 600220 601011 D hypothetical protein 600220..601011 Methylomonas methanica MC09 10670539 YP_004511499.1 CDS Metme_0555 NC_015572.1 601137 601892 D PFAM: Proteasome, subunit alpha/beta; KEGG: tgr:Tgr7_1017 hypothetical protein; 20S proteasome subunits A/B 601137..601892 Methylomonas methanica MC09 10670540 YP_004511500.1 CDS Metme_0556 NC_015572.1 602068 603495 D PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; KEGG: hna:Hneap_1312 protein of unknown function DUF404; hypothetical protein 602068..603495 Methylomonas methanica MC09 10670541 YP_004511501.1 CDS Metme_0557 NC_015572.1 603499 604491 D PFAM: Protein of unknown function DUF403, bacteria; KEGG: hna:Hneap_1311 protein of unknown function DUF403; hypothetical protein 603499..604491 Methylomonas methanica MC09 10670542 YP_004511502.1 CDS Metme_0558 NC_015572.1 604518 605282 D KEGG: hna:Hneap_1310 20S proteasome, A and B subunits; 20S proteasome subunits A/B 604518..605282 Methylomonas methanica MC09 10670543 YP_004511503.1 CDS Metme_0559 NC_015572.1 605375 608656 D KEGG: hna:Hneap_1309 protein of unknown function DUF2126; PFAM: Protein of unknown function DUF2126; Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART: Transglutaminase-like; hypothetical protein 605375..608656 Methylomonas methanica MC09 10670544 YP_004511504.1 CDS Metme_0560 NC_015572.1 608653 608763 D hypothetical protein 608653..608763 Methylomonas methanica MC09 10670545 YP_004511505.1 CDS Metme_0561 NC_015572.1 608763 609983 D KEGG: hna:Hneap_1308 hypothetical protein; hypothetical protein 608763..609983 Methylomonas methanica MC09 10670546 YP_004511506.1 CDS Metme_0562 NC_015572.1 610277 610804 D hypothetical protein 610277..610804 Methylomonas methanica MC09 10670547 YP_004511507.1 CDS Metme_0563 NC_015572.1 610813 611298 R KEGG: meh:M301_0046 hypothetical protein; hypothetical protein complement(610813..611298) Methylomonas methanica MC09 10670548 YP_004511508.1 CDS Metme_0564 NC_015572.1 611295 612644 R PFAM: Glycosyl transferase, family 2; KEGG: pca:Pcar_2790 N-glycosyltransferase; family 2 glycosyl transferase complement(611295..612644) Methylomonas methanica MC09 10670549 YP_004511509.1 CDS Metme_0565 NC_015572.1 612672 616136 R PFAM: Tetratricopeptide TPR2; KEGG: pca:Pcar_2792 hypothetical protein; hypothetical protein complement(612672..616136) Methylomonas methanica MC09 10670550 YP_004511510.1 CDS Metme_0566 NC_015572.1 616411 617043 R PFAM: C-type lectin; PEP-CTERM bacterial; KEGG: cyj:Cyan7822_6057 YD repeat-containing protein; C-type lectin domain-containing protein complement(616411..617043) Methylomonas methanica MC09 10670551 YP_004511511.1 CDS Metme_0567 NC_015572.1 617359 619206 R PFAM: Polysaccharide deacetylase; KEGG: pca:Pcar_2791 hypothetical protein; polysaccharide deacetylase complement(617359..619206) Methylomonas methanica MC09 10670552 YP_004511512.1 CDS Metme_0568 NC_015572.1 619532 619933 R KEGG: nhl:Nhal_2556 hypothetical protein; hypothetical protein complement(619532..619933) Methylomonas methanica MC09 10670553 YP_004511513.1 CDS Metme_0569 NC_015572.1 620011 620358 D PFAM: Macrophage migration inhibitory factor; KEGG: tgr:Tgr7_1126 hypothetical protein; macrophage migration inhibitory factor family protein 620011..620358 Methylomonas methanica MC09 10670554 YP_004511514.1 CDS Metme_0570 NC_015572.1 620359 622338 R KEGG: tgr:Tgr7_1709 hypothetical protein; hypothetical protein complement(620359..622338) Methylomonas methanica MC09 10670555 YP_004511515.1 CDS Metme_0571 NC_015572.1 622858 623322 D KEGG: cvi:CV_3399 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin 622858..623322 Methylomonas methanica MC09 10670556 YP_004511516.1 CDS Metme_0572 NC_015572.1 623406 623645 R KEGG: neu:NE2103 CopG family protein; CopG family transcriptional regulator complement(623406..623645) Methylomonas methanica MC09 10670557 YP_004511517.1 CDS Metme_0573 NC_015572.1 624658 625194 R KEGG: axy:AXYL_04063 hypothetical protein; hypothetical protein complement(624658..625194) Methylomonas methanica MC09 10670558 YP_004511518.1 CDS Metme_0574 NC_015572.1 625380 627314 R HAMAP: Chaperone protein htpG; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; KEGG: mca:MCA0848 heat shock protein 90; SMART: ATP-binding region, ATPase-like; chaperone protein htpG complement(625380..627314) Methylomonas methanica MC09 10670559 YP_004511519.1 CDS Metme_0575 NC_015572.1 627477 629597 R TIGRFAM: RelA/SpoT protein; KEGG: mca:MCA1920 GTP pyrophosphokinase; PFAM: RelA/SpoT; TGS; RelA/SpoT family protein complement(627477..629597) Methylomonas methanica MC09 10670560 YP_004511520.1 CDS Metme_0576 NC_015572.1 629805 631403 R KEGG: sde:Sde_2024 low molecular weight phosphotyrosine protein phosphatase; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; lytic transglycosylase catalytic subunit complement(629805..631403) Methylomonas methanica MC09 10670561 YP_004511521.1 CDS Metme_0577 NC_015572.1 631490 632206 D PFAM: Methyltransferase type 11; KEGG: neu:NE0139 generic methyl-transferase; type 11 methyltransferase 631490..632206 Methylomonas methanica MC09 10670562 YP_004511522.1 CDS Metme_0578 NC_015572.1 632208 632654 D HAMAP: Ribonuclease H; KEGG: abo:ABO_1224 ribonuclease H; PFAM: Ribonuclease H; Ribonuclease H 632208..632654 Methylomonas methanica MC09 10670563 YP_004511523.1 CDS Metme_0579 NC_015572.1 632672 632947 D hypothetical protein 632672..632947 Methylomonas methanica MC09 10670564 YP_004511524.1 CDS Metme_0580 NC_015572.1 632959 633207 D PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: ppd:Ppro_0544 excinuclease ABC subunit C; excinuclease ABC subunit C 632959..633207 Methylomonas methanica MC09 10670565 YP_004511525.1 CDS Metme_0581 NC_015572.1 633314 634717 D KEGG: nhl:Nhal_0414 hypothetical protein; hypothetical protein 633314..634717 Methylomonas methanica MC09 10670566 YP_004511526.1 CDS Metme_0582 NC_015572.1 634852 635403 D PFAM: FMN-binding; KEGG: nhl:Nhal_0415 FMN-binding domain protein; FMN-binding domain-containing protein 634852..635403 Methylomonas methanica MC09 10670567 YP_004511527.1 CDS Metme_0583 NC_015572.1 635403 635891 D KEGG: nhl:Nhal_1772 hypothetical protein; hypothetical protein 635403..635891 Methylomonas methanica MC09 10670568 YP_004511528.1 CDS Metme_0584 NC_015572.1 635972 636517 D hypothetical protein 635972..636517 Methylomonas methanica MC09 10670569 YP_004511529.1 CDS Metme_0585 NC_015572.1 636521 637399 D KEGG: ppf:Pput_1177 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 636521..637399 Methylomonas methanica MC09 10670570 YP_004511530.1 CDS Metme_0586 NC_015572.1 637399 638196 D KEGG: avn:Avin_19810 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain; Hydroxypyruvate isomerase 637399..638196 Methylomonas methanica MC09 10670571 YP_004511531.1 CDS Metme_0587 NC_015572.1 638228 638605 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: tgr:Tgr7_1155 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 638228..638605 Methylomonas methanica MC09 10670572 YP_004511532.1 CDS Metme_0588 NC_015572.1 638612 639148 D hypothetical protein 638612..639148 Methylomonas methanica MC09 10670573 YP_004511533.1 CDS Metme_0589 NC_015572.1 639124 639660 D KEGG: dma:DMR_34810 hypothetical protein; hypothetical protein 639124..639660 Methylomonas methanica MC09 10670574 YP_004511534.1 CDS Metme_0590 NC_015572.1 639657 641012 R PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: mca:MCA2849 potassium transporter peripheral membrane component; TrkA-N domain-containing protein complement(639657..641012) Methylomonas methanica MC09 10670575 YP_004511535.1 CDS Metme_0591 NC_015572.1 641285 643432 D TIGRFAM: Sucrose-phosphate synthase, glycosyltransferase region; HAD-superfamily hydrolase, subfamily IIB; Sucrose phosphate synthase, sucrose phosphatase-like region; KEGG: alv:Alvin_0252 sucrose-phosphate synthase; PFAM: Sucrose-6F-phosphate phosphohydrolase, plant/cyanobacteria; Glycosyl transferase, group 1; sucrose-phosphate synthase 641285..643432 Methylomonas methanica MC09 10670576 YP_004511536.1 CDS Metme_0592 NC_015572.1 643429 644277 D KEGG: noc:Noc_2718 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Sucrose-6F-phosphate phosphohydrolase, plant/cyanobacteria; HAD-superfamily hydrolase 643429..644277 Methylomonas methanica MC09 10670577 YP_004511537.1 CDS Metme_0593 NC_015572.1 644270 645154 D PFAM: Carbohydrate/purine kinase; KEGG: alv:Alvin_0250 PfkB domain-containing protein; PfkB domain-containing protein 644270..645154 Methylomonas methanica MC09 10670578 YP_004511538.1 CDS Metme_0594 NC_015572.1 645275 645487 D hypothetical protein 645275..645487 Methylomonas methanica MC09 10670579 YP_004511539.1 CDS Metme_0595 NC_015572.1 646234 647550 D PFAM: RNA-directed DNA polymerase (reverse transcriptase); KEGG: swo:Swol_2463 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 646234..647550 Methylomonas methanica MC09 10670580 YP_004511540.1 CDS Metme_0596 NC_015572.1 647660 648511 D KEGG: tbd:Tbd_1967 hypothetical protein; hypothetical protein 647660..648511 Methylomonas methanica MC09 10670581 YP_004511541.1 CDS Metme_0597 NC_015572.1 648577 648858 R KEGG: nhl:Nhal_0884 protein of unknown function UPF0125; HAMAP: Protein rnfH; PFAM: Uncharacterised protein family UPF0125; Protein rnfH complement(648577..648858) Methylomonas methanica MC09 10670582 YP_004511542.1 CDS Metme_0598 NC_015572.1 648848 649285 R PFAM: Streptomyces cyclase/dehydrase; KEGG: vfm:VFMJ11_2138 cyclase/dehydrase; cyclase complement(648848..649285) Methylomonas methanica MC09 10670583 YP_004511543.1 CDS Metme_0599 NC_015572.1 649285 650643 R PFAM: Sodium:neurotransmitter symporter; KEGG: mca:MCA2621 sodium-dependent transporter family protein; sodium:neurotransmitter symporter complement(649285..650643) Methylomonas methanica MC09 10670584 YP_004511544.1 CDS Metme_0600 NC_015572.1 650743 651228 D TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: tgr:Tgr7_0962 SsrA-binding protein; PFAM: SsrA-binding protein; SsrA-binding protein 650743..651228 Methylomonas methanica MC09 10670585 YP_004511545.1 CDS Metme_0601 NC_015572.1 651221 651799 D PFAM: Isochorismatase-like; KEGG: tgr:Tgr7_0482 isochorismatase hydrolase; isochorismatase hydrolase 651221..651799 Methylomonas methanica MC09 10670586 YP_004511546.1 CDS Metme_0602 NC_015572.1 651816 652838 D PFAM: ApbE-like lipoprotein; KEGG: cja:CJA_1148 ApbE family protein; ApbE family lipoprotein 651816..652838 Methylomonas methanica MC09 10670587 YP_004511547.1 CDS Metme_0603 NC_015572.1 652888 653607 D KEGG: mca:MCA1825 hypothetical protein; hypothetical protein 652888..653607 Methylomonas methanica MC09 10670588 YP_004511548.1 CDS Metme_0604 NC_015572.1 653712 654332 D PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: slt:Slit_2116 phosphoribosylanthranilate isomerase; N-(5 -phosphoribosyl)anthranilate isomerase 653712..654332 Methylomonas methanica MC09 10670589 YP_004511549.1 CDS Metme_0605 NC_015572.1 654339 655541 D PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: tgr:Tgr7_1253 tryptophan synthase subunit beta; tryptophan synthase subunit beta 654339..655541 Methylomonas methanica MC09 10670590 YP_004511550.1 CDS Metme_0606 NC_015572.1 655538 656341 D PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: mca:MCA2494 tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 655538..656341 Methylomonas methanica MC09 10670591 YP_004511551.1 CDS Metme_0607 NC_015572.1 656366 657286 D PFAM: Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: mca:MCA2493 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 656366..657286 Methylomonas methanica MC09 10670592 YP_004511552.1 CDS Metme_0608 NC_015572.1 657293 658558 D TIGRFAM: Folylpolyglutamate synthetase; KEGG: mca:MCA2492 folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase, central; Mur ligase, C-terminal; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 657293..658558 Methylomonas methanica MC09 10670593 YP_004511553.1 CDS Metme_0609 NC_015572.1 658570 659307 D PFAM: Sporulation/cell division region, bacteria; KEGG: mca:MCA2491 hypothetical protein; sporulation domain-containing protein 658570..659307 Methylomonas methanica MC09 10670594 YP_004511554.1 CDS Metme_0610 NC_015572.1 659340 659858 D PFAM: Colicin V production protein; KEGG: mca:MCA2490 CvpA family protein; colicin V production protein 659340..659858 Methylomonas methanica MC09 10670595 YP_004511555.1 CDS Metme_0611 NC_015572.1 659874 661373 D TIGRFAM: Amidophosphoribosyl transferase; KEGG: mca:MCA2489 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; amidophosphoribosyltransferase 659874..661373 Methylomonas methanica MC09 10670596 YP_004511556.1 CDS Metme_0612 NC_015572.1 661386 662567 D KEGG: mca:MCA2488 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-succinylhomoserine sulfhydrylase 661386..662567 Methylomonas methanica MC09 10670597 YP_004511557.1 CDS Metme_0613 NC_015572.1 662576 664222 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: dat:HRM2_05740 signal transduction family protein (GGDEF domain protein); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase 662576..664222 Methylomonas methanica MC09 10670598 YP_004511558.1 CDS Metme_0614 NC_015572.1 664311 664889 D hypothetical protein 664311..664889 Methylomonas methanica MC09 10670599 YP_004511559.1 CDS Metme_0615 NC_015572.1 664898 665152 R KEGG: avn:Avin_04690 dithiol-glutaredoxin protein; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin; glutaredoxin 3 complement(664898..665152) Methylomonas methanica MC09 10670600 YP_004511560.1 CDS Metme_0616 NC_015572.1 665189 665839 R PFAM: Class II aldolase/adducin, N-terminal; KEGG: hch:HCH_01901 ribulose-5-phosphate 4-epimerase and related epimerase and aldolases; class II aldolase/adducin family protein complement(665189..665839) Methylomonas methanica MC09 10670601 YP_004511561.1 CDS Metme_0617 NC_015572.1 665885 669271 D PFAM: Mechanosensitive ion channel MscS; KEGG: nhl:Nhal_3600 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 665885..669271 Methylomonas methanica MC09 10670602 YP_004511562.1 CDS Metme_0618 NC_015572.1 669364 669816 D TIGRFAM: Ribonucleotide reductase regulator NrdR-like; HAMAP: Transcriptional repressor nrdR; KEGG: mca:MCA1659 transcriptional regulator NrdR; PFAM: ATP-cone; NrdR family transcriptional regulator 669364..669816 Methylomonas methanica MC09 10670603 YP_004511563.1 CDS Metme_0619 NC_015572.1 669813 670901 D TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: mca:MCA1658 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; riboflavin biosynthesis protein RibD 669813..670901 Methylomonas methanica MC09 10670604 YP_004511564.1 CDS Metme_0620 NC_015572.1 670918 671574 D TIGRFAM: Lumazine-binding protein; KEGG: tgr:Tgr7_1560 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 670918..671574 Methylomonas methanica MC09 10670605 YP_004511565.1 CDS Metme_0621 NC_015572.1 671571 672683 D TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: mca:MCA1656 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 671571..672683 Methylomonas methanica MC09 10670606 YP_004511566.1 CDS Metme_0622 NC_015572.1 672735 673211 D TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: alv:Alvin_1768 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 672735..673211 Methylomonas methanica MC09 10670607 YP_004511567.1 CDS Metme_0623 NC_015572.1 673211 673654 D TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: noc:Noc_0803 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 673211..673654 Methylomonas methanica MC09 10670608 YP_004511568.1 CDS Metme_0624 NC_015572.1 673654 674589 D TIGRFAM: Thiamine-monophosphate kinase; KEGG: alv:Alvin_1766 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; thiamine-monophosphate kinase 673654..674589 Methylomonas methanica MC09 10670609 YP_004511569.1 CDS Metme_0625 NC_015572.1 674573 675070 D KEGG: shm:Shewmr7_1168 phosphatidylglycerophosphatase; PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase 674573..675070 Methylomonas methanica MC09 10670610 YP_004511570.1 CDS Metme_0626 NC_015572.1 675338 676114 D PFAM: Protein of unknown function DUF336; KEGG: neu:NE2508 hypothetical protein; hypothetical protein 675338..676114 Methylomonas methanica MC09 10670611 YP_004511571.1 CDS Metme_0627 NC_015572.1 676244 676501 D KEGG: mca:MCA2875 hypothetical protein; hypothetical protein 676244..676501 Methylomonas methanica MC09 10670612 YP_004511572.1 CDS Metme_0628 NC_015572.1 676511 677161 R manually curated; KEGG: kko:Kkor_2526 hypothetical protein; hypothetical protein complement(676511..677161) Methylomonas methanica MC09 10670613 YP_004511573.1 CDS Metme_0629 NC_015572.1 677592 678017 D hypothetical protein 677592..678017 Methylomonas methanica MC09 10670614 YP_004511574.1 CDS Metme_0630 NC_015572.1 677999 679195 D PFAM: Uncharacterised protein family UPF0027; KEGG: azo:azo0079 RtcB protein; hypothetical protein 677999..679195 Methylomonas methanica MC09 10670615 YP_004511575.1 CDS Metme_0631 NC_015572.1 679337 679732 R hypothetical protein complement(679337..679732) Methylomonas methanica MC09 10670616 YP_004511576.1 CDS Metme_0632 NC_015572.1 679770 681125 R KEGG: alv:Alvin_2134 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; TolC family type I secretion outer membrane protein complement(679770..681125) Methylomonas methanica MC09 10670617 YP_004511577.1 CDS Metme_0633 NC_015572.1 681231 682112 D TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: mca:MCA2203 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 681231..682112 Methylomonas methanica MC09 10670618 YP_004511578.1 CDS Metme_0634 NC_015572.1 682238 683548 D KEGG: mca:MCA0778 methanol utilization control sensor protein MoxY, PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; HAMP linker domain; SMART: HAMP linker domain; signal transduction histidine kinase 682238..683548 Methylomonas methanica MC09 10670619 YP_004511579.1 CDS Metme_0635 NC_015572.1 683681 684955 R PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: mca:MCA0361 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase complement(683681..684955) Methylomonas methanica MC09 10670620 YP_004511580.1 CDS Metme_0636 NC_015572.1 685121 685459 D PFAM: Histidine triad (HIT) protein; KEGG: tkm:TK90_1852 histidine triad (HIT) protein; histidine triad (HIT) protein 685121..685459 Methylomonas methanica MC09 10670621 YP_004511581.1 CDS Metme_0637 NC_015572.1 685476 685790 R PFAM: Protein of unknown function DUF190; KEGG: mca:MCA1930 hypothetical protein; hypothetical protein complement(685476..685790) Methylomonas methanica MC09 10670622 YP_004511582.1 CDS Metme_0638 NC_015572.1 685766 686473 R TIGRFAM: Camphor resistance CrcB protein; HAMAP: CrcB-like protein; KEGG: mca:MCA1973 CrcB protein domain-containing protein; PFAM: Camphor resistance CrcB protein; CrcB-like protein complement(685766..686473) Methylomonas methanica MC09 10670623 YP_004511583.1 CDS Metme_0639 NC_015572.1 686515 687405 R TIGRFAM: GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; KEGG: mca:MCA0537 hypothetical protein; PFAM: GTPase EngC; ribosome biogenesis GTPase RsgA complement(686515..687405) Methylomonas methanica MC09 10670624 YP_004511584.1 CDS Metme_0640 NC_015572.1 687405 688655 R KEGG: mca:MCA0538 M48 family peptidase; PFAM: Peptidase M48, Ste24p; Ste24 endopeptidase complement(687405..688655) Methylomonas methanica MC09 10670625 YP_004511585.1 CDS Metme_0641 NC_015572.1 688756 689301 D HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: psa:PST_3793 oligoribonuclease; SMART: Exonuclease; oligoribonuclease 688756..689301 Methylomonas methanica MC09 10670626 YP_004511586.1 CDS Metme_0642 NC_015572.1 689397 690668 D PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: mca:MCA1971 seryl-tRNA synthetase; seryl-tRNA synthetase 689397..690668 Methylomonas methanica MC09 10670627 YP_004511587.1 CDS Metme_0643 NC_015572.1 690822 691202 D PFAM: Globin, truncated bacterial-like; KEGG: mca:MCA2507 hypothetical protein; globin 690822..691202 Methylomonas methanica MC09 10670628 YP_004511588.1 CDS Metme_0644 NC_015572.1 697331 697831 D KEGG: pna:Pnap_1740 transposase; transposase 697331..697831 Methylomonas methanica MC09 10670634 YP_004511589.1 CDS Metme_0645 NC_015572.1 697828 698910 D PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit 697828..698910 Methylomonas methanica MC09 10670635 YP_004511590.1 CDS Metme_0647 NC_015572.1 699667 699852 D hypothetical protein 699667..699852 Methylomonas methanica MC09 10670637 YP_004511591.1 CDS Metme_0648 NC_015572.1 700005 701150 R PFAM: Glucose-6-phosphate dehydrogenase subunit; KEGG: hau:Haur_3022 glucose-6-phosphate dehydrogenase assembly protein OpcA-like protein; glucose-6-phosphate dehydrogenase subunit complement(700005..701150) Methylomonas methanica MC09 10670638 YP_004511592.1 CDS Metme_0649 NC_015572.1 701135 702679 R TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: nde:NIDE2203 glucose-6-phosphate dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(701135..702679) Methylomonas methanica MC09 10670639 YP_004511593.1 CDS Metme_0650 NC_015572.1 702712 704307 R KEGG: cyc:PCC7424_3777 glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); PFAM: Phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase complement(702712..704307) Methylomonas methanica MC09 10670640 YP_004511594.1 CDS Metme_0651 NC_015572.1 704340 705344 R TIGRFAM: 6-phosphogluconate dehydrogenase related protein; KEGG: bra:BRADO5810 6-phosphogluconate dehydrogenase-like protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase complement(704340..705344) Methylomonas methanica MC09 10670641 YP_004511595.1 CDS Metme_0652 NC_015572.1 705772 707499 R KEGG: bja:bll2800 bifunctional serine/threonine kinase and phosphatase; PFAM: Serine/threonine-protein kinase-like domain; Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related; Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; Ser/Thr phosphatase complement(705772..707499) Methylomonas methanica MC09 10670642 YP_004511596.1 CDS Metme_0653 NC_015572.1 707548 707880 R hypothetical protein complement(707548..707880) Methylomonas methanica MC09 10670643 YP_004511597.1 CDS Metme_0654 NC_015572.1 707966 709444 R KEGG: swd:Swoo_2626 major facilitator transporter; TIGRFAM: Nitrate transporter; PFAM: Major facilitator superfamily MFS-1; nitrite transporter complement(707966..709444) Methylomonas methanica MC09 10670644 YP_004511598.1 CDS Metme_0655 NC_015572.1 709696 710022 R KEGG: msm:MSMEG_1307 EthD protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD complement(709696..710022) Methylomonas methanica MC09 10670645 YP_004511599.1 CDS Metme_0656 NC_015572.1 710139 711014 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: scl:sce7112 LysR family transcriptional regulator; LysR family transcriptional regulator 710139..711014 Methylomonas methanica MC09 10670646 YP_004511600.1 CDS Metme_0657 NC_015572.1 711043 712530 R KEGG: caa:Caka_2221 fibronectin type III domain protein; manually curated; PFAM: PEP-CTERM bacterial; hypothetical protein complement(711043..712530) Methylomonas methanica MC09 10670647 YP_004511601.1 CDS Metme_0658 NC_015572.1 712671 713483 R PFAM: Metallophosphoesterase; KEGG: azo:azo2196 metallo-phosphoesterase; metallophosphoesterase complement(712671..713483) Methylomonas methanica MC09 10670648 YP_004511602.1 CDS Metme_0659 NC_015572.1 713529 714248 R PFAM: PhoU; KEGG: pst:PSPTO_5483 phosphate transport system protein PhoU; phosphate uptake regulator PhoU complement(713529..714248) Methylomonas methanica MC09 10670649 YP_004511603.1 CDS Metme_0660 NC_015572.1 714372 714743 R hypothetical protein complement(714372..714743) Methylomonas methanica MC09 10670650 YP_004511604.1 CDS Metme_0661 NC_015572.1 714861 715274 R TIGRFAM: Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; KEGG: slt:Slit_0162 large conductance mechanosensitive channel protein; PFAM: Large-conductance mechanosensitive channel; Large-conductance mechanosensitive channel complement(714861..715274) Methylomonas methanica MC09 10670651 YP_004511605.1 CDS Metme_0662 NC_015572.1 715563 718136 R TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: tgr:Tgr7_0817 ATP-dependent chaperone ClpB; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB complement(715563..718136) Methylomonas methanica MC09 10670652 YP_004511606.1 CDS Metme_0663 NC_015572.1 718406 718609 D KEGG: ank:AnaeK_0262 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 718406..718609 Methylomonas methanica MC09 10670653 YP_004511607.1 CDS Metme_0664 NC_015572.1 718735 719667 D KEGG: mca:MCA1787 hypothetical protein; hypothetical protein 718735..719667 Methylomonas methanica MC09 10670654 YP_004511608.1 CDS Metme_0665 NC_015572.1 719775 720029 D hypothetical protein 719775..720029 Methylomonas methanica MC09 10670655 YP_004511609.1 CDS Metme_0666 NC_015572.1 720026 720874 R PFAM: Radical SAM; KEGG: neu:NE1518 hypothetical protein; radical SAM protein complement(720026..720874) Methylomonas methanica MC09 10670656 YP_004511610.1 CDS Metme_0667 NC_015572.1 720881 721693 R TIGRFAM: Formylmethanofuran dehydrogenase subunit C; KEGG: nhl:Nhal_0012 formylmethanofuran dehydrogenase subunit C; PFAM: Glutamate synthase, alpha subunit, C-terminal; formylmethanofuran dehydrogenase subunit C complement(720881..721693) Methylomonas methanica MC09 10670657 YP_004511611.1 CDS Metme_0668 NC_015572.1 721690 722586 R PFAM: Formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr); TIGRFAM: Formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr), subgroup; HAMAP: Formylmethanofuran--tetrahydromethanopterin formyltransferase; KEGG: mca:MCA2858 formylmethanofuran--tetrahydromethanopterin formyltransferase; formylmethanofuran--tetrahydromethanopterin formyltransferase complement(721690..722586) Methylomonas methanica MC09 10670658 YP_004511612.1 CDS Metme_0669 NC_015572.1 722583 724247 R KEGG: nhl:Nhal_0014 formylmethanofuran dehydrogenase subunit A; TIGRFAM: Formylmethanofuran dehydrogenase, subunit A; PFAM: Amidohydrolase 3; formylmethanofuran dehydrogenase subunit A complement(722583..724247) Methylomonas methanica MC09 10670659 YP_004511613.1 CDS Metme_0670 NC_015572.1 724257 725516 R KEGG: nhl:Nhal_0015 formylmethanofuran dehydrogenase subunit B; Formylmethanofuran dehydrogenase complement(724257..725516) Methylomonas methanica MC09 10670660 YP_004511614.1 CDS Metme_0671 NC_015572.1 725527 725904 R PFAM: Transcriptional coactivator/pterin dehydratase; KEGG: mfa:Mfla_1646 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase complement(725527..725904) Methylomonas methanica MC09 10670661 YP_004511615.1 CDS Metme_0672 NC_015572.1 726030 726416 R PFAM: Stringent starvation protein B; KEGG: mca:MCA1958 ClpXP protease specificity-enhancing factor; stringent starvation protein B complement(726030..726416) Methylomonas methanica MC09 10670662 YP_004511616.1 CDS Metme_0673 NC_015572.1 726413 727048 R PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: mca:MCA1959 stringent starvation protein A; glutathione S-transferase domain-containing protein complement(726413..727048) Methylomonas methanica MC09 10670663 YP_004511617.1 CDS Metme_0674 NC_015572.1 727188 727907 R PFAM: Cytochrome c1; KEGG: nhl:Nhal_3862 cytochrome c1; cytochrome c1 complement(727188..727907) Methylomonas methanica MC09 10670664 YP_004511618.1 CDS Metme_0675 NC_015572.1 727911 729308 R PFAM: Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal; KEGG: tbd:Tbd_1832 cytochrome b subunit of cytochrome bc1; cytochrome b/b6 domain-containing protein complement(727911..729308) Methylomonas methanica MC09 10670665 YP_004511619.1 CDS Metme_0676 NC_015572.1 729305 729904 R TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; KEGG: mca:MCA1962 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(729305..729904) Methylomonas methanica MC09 10670666 YP_004511620.1 CDS Metme_0677 NC_015572.1 730041 731129 R PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: nhl:Nhal_0352 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase complement(730041..731129) Methylomonas methanica MC09 10670667 YP_004511621.1 CDS Metme_0678 NC_015572.1 731373 732707 R KEGG: mei:Msip34_0377 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter; amino acid carrier protein complement(731373..732707) Methylomonas methanica MC09 10670668 YP_004511622.1 CDS Metme_0679 NC_015572.1 732879 733124 D TIGRFAM: Prevent-host-death protein; KEGG: gur:Gura_2397 prevent-host-death family protein; prevent-host-death family protein 732879..733124 Methylomonas methanica MC09 10670669 YP_004511623.1 CDS Metme_0680 NC_015572.1 733108 733509 D PFAM: PilT protein, N-terminal; KEGG: gur:Gura_2398 PilT domain-containing protein; twitching motility protein PilT 733108..733509 Methylomonas methanica MC09 10670670 YP_004511624.1 CDS Metme_0682 NC_015572.1 734816 736627 D KEGG: app:CAP2UW1_2485 tetratricopeptide TPR_4; hypothetical protein 734816..736627 Methylomonas methanica MC09 10670672 YP_004511625.1 CDS Metme_0683 NC_015572.1 736624 738993 D PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: app:CAP2UW1_2484 tetratricopeptide TPR_2 repeat protein; hypothetical protein 736624..738993 Methylomonas methanica MC09 10670673 YP_004511626.1 CDS Metme_0684 NC_015572.1 739084 739824 D KEGG: syf:Synpcc7942_1288 hypothetical protein; hypothetical protein 739084..739824 Methylomonas methanica MC09 10670674 YP_004511627.1 CDS Metme_0685 NC_015572.1 739939 740229 D manually curated; KEGG: aba:Acid345_3611 hypothetical protein; hypothetical protein 739939..740229 Methylomonas methanica MC09 10670675 YP_004511628.1 CDS Metme_0686 NC_015572.1 740271 740834 D PFAM: Protein of unknown function DUF1877; KEGG: neu:NE1814 hypothetical protein; hypothetical protein 740271..740834 Methylomonas methanica MC09 10670676 YP_004511629.1 CDS Metme_0687 NC_015572.1 740852 741520 D KEGG: ank:AnaeK_4104 hypothetical protein; hypothetical protein 740852..741520 Methylomonas methanica MC09 10670677 YP_004511630.1 CDS Metme_0688 NC_015572.1 741943 742395 D hypothetical protein 741943..742395 Methylomonas methanica MC09 10670678 YP_004511631.1 CDS Metme_0689 NC_015572.1 742535 742867 D PFAM: Transposase IS3/IS911; KEGG: azl:AZL_f00580 transposase; transposase IS3/IS911 family protein 742535..742867 Methylomonas methanica MC09 10670679 YP_004511632.1 CDS Metme_0690 NC_015572.1 742864 743766 D PFAM: Integrase, catalytic core; KEGG: psp:PSPPH_A0089 ISPsy21, transposase orfB; integrase catalytic subunit 742864..743766 Methylomonas methanica MC09 10670680 YP_004511633.1 CDS Metme_0691 NC_015572.1 744353 744664 R KEGG: lpn:lpg2914 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator complement(744353..744664) Methylomonas methanica MC09 10670681 YP_004511634.1 CDS Metme_0692 NC_015572.1 744639 744920 R PFAM: Protein of unknown function DUF497; KEGG: mch:Mchl_1764 protein of unknown function DUF497; hypothetical protein complement(744639..744920) Methylomonas methanica MC09 10670682 YP_004511635.1 CDS Metme_0694 NC_015572.1 745576 745872 D KEGG: pna:Pnap_3099 hypothetical protein; hypothetical protein 745576..745872 Methylomonas methanica MC09 10670684 YP_004511636.1 CDS Metme_0695 NC_015572.1 746187 747488 R PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: ppw:PputW619_4249 histidinol dehydrogenase; histidinol dehydrogenase complement(746187..747488) Methylomonas methanica MC09 10670685 YP_004511637.1 CDS Metme_0696 NC_015572.1 747494 748120 R PFAM: ATP phosphoribosyltransferase, catalytic region; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; HAMAP: ATP phosphoribosyltransferase; KEGG: mca:MCA1964 ATP phosphoribosyltransferase catalytic subunit; ATP phosphoribosyltransferase complement(747494..748120) Methylomonas methanica MC09 10670686 YP_004511638.1 CDS Metme_0697 NC_015572.1 748136 749401 R PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: mca:MCA1965 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(748136..749401) Methylomonas methanica MC09 10670687 YP_004511639.1 CDS Metme_0698 NC_015572.1 749394 749741 R PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: nwa:Nwat_0305 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(749394..749741) Methylomonas methanica MC09 10670688 YP_004511640.1 CDS Metme_0699 NC_015572.1 749741 750205 R PFAM: Mammalian cell entry related; KEGG: mca:MCA1967 hypothetical protein; mammalian cell entry domain-containing protein complement(749741..750205) Methylomonas methanica MC09 10670689 YP_004511641.1 CDS Metme_0700 NC_015572.1 750207 750989 R KEGG: mca:MCA1968 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; hypothetical protein complement(750207..750989) Methylomonas methanica MC09 10670690 YP_004511642.1 CDS Metme_0701 NC_015572.1 751002 751820 R PFAM: ABC transporter-like; KEGG: mca:MCA1969 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase complement(751002..751820) Methylomonas methanica MC09 10670691 YP_004511643.1 CDS Metme_0702 NC_015572.1 751898 752938 D TIGRFAM: KpsF/GutQ; KEGG: nhl:Nhal_0339 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; KpsF/GutQ family protein 751898..752938 Methylomonas methanica MC09 10670692 YP_004511644.1 CDS Metme_0703 NC_015572.1 752949 753482 D TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; KEGG: nla:NLA_4140 hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 752949..753482 Methylomonas methanica MC09 10670693 YP_004511645.1 CDS Metme_0704 NC_015572.1 753479 754045 D PFAM: Protein of unknown function DUF1239; KEGG: tgr:Tgr7_0729 hypothetical protein; hypothetical protein 753479..754045 Methylomonas methanica MC09 10670694 YP_004511646.1 CDS Metme_0705 NC_015572.1 754032 754532 D KEGG: mca:MCA0743 hypothetical protein; TIGRFAM: Cell envelope biogenesis YhbN; PFAM: OstA-like protein; lipopolysaccharide transport periplasmic protein LptA 754032..754532 Methylomonas methanica MC09 10670695 YP_004511647.1 CDS Metme_0706 NC_015572.1 754534 755259 D PFAM: ABC transporter-like; KEGG: mca:MCA0742 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 754534..755259 Methylomonas methanica MC09 10670696 YP_004511648.1 CDS Metme_0707 NC_015572.1 755273 756709 D KEGG: mca:MCA0741 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; RNA polymerase sigma 54 subunit RpoN 755273..756709 Methylomonas methanica MC09 10670697 YP_004511649.1 CDS Metme_0708 NC_015572.1 756751 757041 D KEGG: tgr:Tgr7_0725 sigma 54 modulation protein / SSU ribosomal protein S30P; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; sigma 54 modulation protein/30S ribosomal protein S30EA 756751..757041 Methylomonas methanica MC09 10670698 YP_004511650.1 CDS Metme_0709 NC_015572.1 757095 757952 D HAMAP: ATPase, P-loop-containing; KEGG: mca:MCA0739 hypothetical protein; hypothetical protein 757095..757952 Methylomonas methanica MC09 10670699 YP_004511651.1 CDS Metme_0710 NC_015572.1 757989 759344 D KEGG: nhl:Nhal_0326 magnesium transporter; TIGRFAM: Divalent cation transporter; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region; magnesium transporter 757989..759344 Methylomonas methanica MC09 10670700 YP_004511652.1 CDS Metme_0711 NC_015572.1 759421 760161 D TIGRFAM: Septum formation inhibitor MinC; HAMAP: Septum formation inhibitor MinC; KEGG: neu:NE1831 cell division inhibitor MinC; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal; septum site-determining protein minC 759421..760161 Methylomonas methanica MC09 10670701 YP_004511653.1 CDS Metme_0712 NC_015572.1 760183 760995 D KEGG: net:Neut_1136 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; septum site-determining protein MinD 760183..760995 Methylomonas methanica MC09 10670702 YP_004511654.1 CDS Metme_0713 NC_015572.1 760995 761249 D TIGRFAM: Septum formation topological specificity factor MinE; HAMAP: Septum formation topological specificity factor MinE; KEGG: neu:NE1829 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; cell division topological specificity factor 760995..761249 Methylomonas methanica MC09 10670703 YP_004511655.1 CDS Metme_0714 NC_015572.1 761330 761527 D PFAM: Protein of unknown function DUF2582; KEGG: mca:MCA3069 hypothetical protein; hypothetical protein 761330..761527 Methylomonas methanica MC09 10670704 YP_004511656.1 CDS Metme_0715 NC_015572.1 761788 764631 D PFAM: Glycosyl transferase, family 2; KEGG: pla:Plav_0560 glycosyl transferase; family 2 glycosyl transferase 761788..764631 Methylomonas methanica MC09 10670705 YP_004511657.1 CDS Metme_0716 NC_015572.1 764708 765604 R PFAM: SAICAR synthetase; TIGRFAM: SAICAR synthetase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: alv:Alvin_2538 phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(764708..765604) Methylomonas methanica MC09 10670706 YP_004511658.1 CDS Metme_0717 NC_015572.1 765767 767107 D PFAM: Protein of unknown function DUF877; KEGG: nde:NIDE2011 hypothetical protein; hypothetical protein 765767..767107 Methylomonas methanica MC09 10670707 YP_004511659.1 CDS Metme_0718 NC_015572.1 767283 769286 D KEGG: hch:HCH_00093 autotransporter beta-domain-containing protein; TIGRFAM: Outer membrane autotransporter barrel; PFAM: Autotransporter beta-domain; outer membrane autotransporter barrel domain-containing protein 767283..769286 Methylomonas methanica MC09 10670708 YP_004511660.1 CDS Metme_0719 NC_015572.1 769327 770454 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Coenzyme PQQ biosynthesis protein E, bacteria; KEGG: mca:MCA1449 pyrroloquinoline quinone biosynthesis protein PqqE; HAMAP: Coenzyme PQQ synthesis protein E; PFAM: Radical SAM; coenzyme PQQ synthesis protein E complement(769327..770454) Methylomonas methanica MC09 10670709 YP_004511661.1 CDS Metme_0720 NC_015572.1 770432 770704 R TIGRFAM: coenzyme PQQ biosynthesis protein PqqD; KEGG: mca:MCA1448 pyrroloquinoline quinone biosynthesis protein PqqD; coenzyme PQQ biosynthesis protein PqqD complement(770432..770704) Methylomonas methanica MC09 10670710 YP_004511662.1 CDS Metme_0721 NC_015572.1 770734 771297 R PFAM: Protein of unknown function DUF820; KEGG: tmz:Tmz1t_3808 protein of unknown function DUF820; hypothetical protein complement(770734..771297) Methylomonas methanica MC09 10670711 YP_004511663.1 CDS Metme_0722 NC_015572.1 771300 772028 R PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; TIGRFAM: Coenzyme PQQ biosynthesis protein C; HAMAP: Pyrroloquinoline-quinone synthase; KEGG: mca:MCA1447 pyrroloquinoline quinone biosynthesis protein PqqC; Pyrroloquinoline-quinone synthase complement(771300..772028) Methylomonas methanica MC09 10670712 YP_004511664.1 CDS Metme_0723 NC_015572.1 772039 772950 R KEGG: mca:MCA1446 pyrroloquinoline quinone biosynthesis protein PqqB; TIGRFAM: Coenzyme PQQ biosynthesis protein B; HAMAP: Coenzyme PQQ synthesis protein B; coenzyme PQQ synthesis protein B complement(772039..772950) Methylomonas methanica MC09 10670713 YP_004511665.1 CDS Metme_0724 NC_015572.1 773053 773256 R KEGG: mca:MCA1445.1 coenzyme PQQ biosynthesis protein A; TIGRFAM: Coenzyme PQQ biosynthesis protein A; HAMAP: Coenzyme PQQ synthesis protein A; PFAM: Coenzyme PQQ biosynthesis protein A; coenzyme PQQ synthesis protein A complement(773053..773256) Methylomonas methanica MC09 10670714 YP_004511666.1 CDS Metme_0725 NC_015572.1 773279 774067 R PFAM: Protein of unknown function DUF81; KEGG: mca:MCA0023 hypothetical protein; hypothetical protein complement(773279..774067) Methylomonas methanica MC09 10670715 YP_004511667.1 CDS Metme_0726 NC_015572.1 774159 775397 D KEGG: mca:MCA0022 tRNA nucleotidyltransferase; HAMAP: Multifunctional CCA protein; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; polynucleotide adenylyltransferase 774159..775397 Methylomonas methanica MC09 10670716 YP_004511668.1 CDS Metme_0727 NC_015572.1 775405 775755 D PFAM: Protein of unknown function DUF486; KEGG: mmw:Mmwyl1_2937 hypothetical protein; hypothetical protein 775405..775755 Methylomonas methanica MC09 10670717 YP_004511669.1 CDS Metme_0728 NC_015572.1 775784 776629 D PFAM: Protein of unknown function DUF519; KEGG: vex:VEA_001953 hypothetical protein; hypothetical protein 775784..776629 Methylomonas methanica MC09 10670718 YP_004511670.1 CDS Metme_0729 NC_015572.1 776653 777078 D hypothetical protein 776653..777078 Methylomonas methanica MC09 10670719 YP_004511671.1 CDS Metme_0730 NC_015572.1 777112 778551 D PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: mca:MCA0382 TldD protein; peptidase U62 777112..778551 Methylomonas methanica MC09 10670720 YP_004511672.1 CDS Metme_0731 NC_015572.1 778573 779904 D PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: mca:MCA0383 PmbA protein; peptidase U62 778573..779904 Methylomonas methanica MC09 10670721 YP_004511673.1 CDS Metme_0732 NC_015572.1 779992 781272 D KEGG: maq:Maqu_0329 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 779992..781272 Methylomonas methanica MC09 10670722 YP_004511674.1 CDS Metme_0733 NC_015572.1 781594 782757 D SMART: Transcription regulator LuxR, C-terminal; KEGG: ctt:CtCNB1_0624 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 781594..782757 Methylomonas methanica MC09 10670723 YP_004511675.1 CDS Metme_0734 NC_015572.1 782902 784041 D KEGG: mca:MCA2814 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 782902..784041 Methylomonas methanica MC09 10670724 YP_004511676.1 CDS Metme_0735 NC_015572.1 784038 787136 D PFAM: Acriflavin resistance protein; KEGG: mca:MCA2815 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 784038..787136 Methylomonas methanica MC09 10670725 YP_004511677.1 CDS Metme_0736 NC_015572.1 787227 788690 D KEGG: mca:MCA2816 outer membrane efflux family protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 787227..788690 Methylomonas methanica MC09 10670726 YP_004511678.1 CDS Metme_0737 NC_015572.1 788915 789928 R PFAM: Dihydroorotate dehydrogenase, class 1/ 2; TIGRFAM: Dihydroorotate dehydrogenase, class 2; HAMAP: Dihydroorotate dehydrogenase; KEGG: cvi:CV_1812 dihydroorotate dehydrogenase 2; Dihydroorotate dehydrogenase complement(788915..789928) Methylomonas methanica MC09 10670727 YP_004511679.1 CDS Metme_0738 NC_015572.1 790007 791101 R PFAM: FAD dependent oxidoreductase; KEGG: alv:Alvin_1597 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(790007..791101) Methylomonas methanica MC09 10670728 YP_004511680.1 CDS Metme_0739 NC_015572.1 791475 792383 D KEGG: neu:NE2218 hypothetical protein; hypothetical protein 791475..792383 Methylomonas methanica MC09 10670729 YP_004511681.1 CDS Metme_0740 NC_015572.1 792526 793473 D TIGRFAM: Peptidase S33, proline iminopeptidase 1; KEGG: mca:MCA1737 proline iminopeptidase; PFAM: Alpha/beta hydrolase fold-1; proline iminopeptidase 792526..793473 Methylomonas methanica MC09 10670730 YP_004511682.1 CDS Metme_0741 NC_015572.1 793487 794074 D KEGG: mms:mma_3265 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 793487..794074 Methylomonas methanica MC09 10670731 YP_004511683.1 CDS Metme_0742 NC_015572.1 794271 794918 D TIGRFAM: 3-hexulose-6-phosphate synthase; KEGG: mca:MCA3049 hexulose-6-phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase, core; 3-hexulose-6-phosphate synthase 794271..794918 Methylomonas methanica MC09 10670732 YP_004511684.1 CDS Metme_0743 NC_015572.1 795067 797079 D TIGRFAM: Transketolase, bacterial-like; KEGG: mca:MCA3046 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 795067..797079 Methylomonas methanica MC09 10670733 YP_004511685.1 CDS Metme_0744 NC_015572.1 797158 797433 D hypothetical protein 797158..797433 Methylomonas methanica MC09 10670734 YP_004511686.1 CDS Metme_0745 NC_015572.1 797551 798957 D KEGG: lif:LinJ32.2780 membrane associated protein-like protein; hypothetical protein 797551..798957 Methylomonas methanica MC09 10670735 YP_004511687.1 CDS Metme_0746 NC_015572.1 799111 799455 D KEGG: mca:MCA2466 hypothetical protein; hypothetical protein 799111..799455 Methylomonas methanica MC09 10670736 YP_004511688.1 CDS Metme_0747 NC_015572.1 799517 799927 R hypothetical protein complement(799517..799927) Methylomonas methanica MC09 10670737 YP_004511689.1 CDS Metme_0748 NC_015572.1 800156 800440 D hypothetical protein 800156..800440 Methylomonas methanica MC09 10670738 YP_004511690.1 CDS Metme_0749 NC_015572.1 800430 801170 D KEGG: mca:MCA2986 pteridine reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 800430..801170 Methylomonas methanica MC09 10670739 YP_004511691.1 CDS Metme_0750 NC_015572.1 801167 801658 R KEGG: mca:MCA2987 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(801167..801658) Methylomonas methanica MC09 10670740 YP_004511692.1 CDS Metme_0751 NC_015572.1 801660 802013 R KEGG: mca:MCA2988 dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase; Dihydroneopterin aldolase subgroup; PFAM: Dihydroneopterin aldolase; dihydroneopterin aldolase complement(801660..802013) Methylomonas methanica MC09 10670741 YP_004511693.1 CDS Metme_0752 NC_015572.1 802101 802673 D TIGRFAM: Membrane protein YgiH; HAMAP: Protein of unknown function DUF205; KEGG: mca:MCA2989 hypothetical protein; PFAM: Protein of unknown function DUF205; Glycerol-3-phosphate acyltransferase 802101..802673 Methylomonas methanica MC09 10670742 YP_004511694.1 CDS Metme_0753 NC_015572.1 802675 803685 R PFAM: Peptidase M22, glycoprotease; TIGRFAM: glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: vsa:VSAL_I2694 DNA-binding/iron metalloprotein/AP endonuclease; O-sialoglycoprotein endopeptidase complement(802675..803685) Methylomonas methanica MC09 10670743 YP_004511695.1 CDS Metme_0754 NC_015572.1 803792 804025 D TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: mca:MCA2991 ribosomal protein S21; PFAM: Ribosomal protein S21; 30S ribosomal protein S21 803792..804025 Methylomonas methanica MC09 10670744 YP_004511696.1 CDS Metme_0755 NC_015572.1 804037 804486 D KEGG: tgr:Tgr7_3018 hypothetical protein; hypothetical protein 804037..804486 Methylomonas methanica MC09 10670745 YP_004511697.1 CDS Metme_0756 NC_015572.1 804509 806239 D TIGRFAM: DNA primase, DnaG; KEGG: mca:MCA2993 DNA primase; DNA primase 804509..806239 Methylomonas methanica MC09 10670746 YP_004511698.1 CDS Metme_0757 NC_015572.1 806315 808129 D KEGG: mca:MCA2994 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma factor 70, non-essential region; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 subunit RpoD 806315..808129 Methylomonas methanica MC09 10670747 YP_004511699.1 CDS Metme_0758 NC_015572.1 808279 809439 D PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: mca:MCA0139 S-adenosylmethionine synthetase; S-adenosylmethionine synthase 808279..809439 Methylomonas methanica MC09 10670749 YP_004511700.1 CDS Metme_0759 NC_015572.1 809458 810750 D PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; TIGRFAM: S-adenosyl-L-homocysteine hydrolase; HAMAP: Adenosylhomocysteinase; KEGG: adenosylhomocysteinase; adenosylhomocysteinase 809458..810750 Methylomonas methanica MC09 10670750 YP_004511701.1 CDS Metme_0760 NC_015572.1 810806 812155 D TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: nhl:Nhal_3353 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 810806..812155 Methylomonas methanica MC09 10670751 YP_004511702.1 CDS Metme_0761 NC_015572.1 812155 812883 D KEGG: mca:MCA0018 hypothetical protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E; Ribosomal RNA small subunit methyltransferase E 812155..812883 Methylomonas methanica MC09 10670752 YP_004511703.1 CDS Metme_0762 NC_015572.1 812883 813746 D PFAM: Abortive infection protein; KEGG: mca:MCA0527 hypothetical protein; abortive infection protein 812883..813746 Methylomonas methanica MC09 10670753 YP_004511704.1 CDS Metme_0763 NC_015572.1 813813 814892 D KEGG: nmu:Nmul_A1766 hypothetical protein; PFAM: Aminoglycoside phosphotransferase; SMART: CHK kinase-like; aminoglycoside phosphotransferase 813813..814892 Methylomonas methanica MC09 10670754 YP_004511705.1 CDS Metme_0764 NC_015572.1 815593 816819 D KEGG: hch:HCH_05208 aspartate kinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; aspartate kinase 815593..816819 Methylomonas methanica MC09 10670755 YP_004511706.1 CDS Metme_0765 NC_015572.1 817113 818159 D KEGG: mep:MPQ_0662 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde-3-phosphate dehydrogenase 817113..818159 Methylomonas methanica MC09 10670756 YP_004511707.1 CDS Metme_0766 NC_015572.1 818193 818942 R PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: dsa:Desal_0157 filamentation induced by cAMP protein Fic; Fic family protein complement(818193..818942) Methylomonas methanica MC09 10670757 YP_004511708.1 CDS Metme_0767 NC_015572.1 818964 820073 R PFAM: Queuine/other tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: hch:HCH_04469 queuine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(818964..820073) Methylomonas methanica MC09 10670758 YP_004511709.1 CDS Metme_0768 NC_015572.1 820092 820604 R KEGG: mca:MCA1366 hypothetical protein; hypothetical protein complement(820092..820604) Methylomonas methanica MC09 10670759 YP_004511710.1 CDS Metme_0770 NC_015572.1 821651 822523 D hypothetical protein 821651..822523 Methylomonas methanica MC09 10670761 YP_004511711.1 CDS Metme_0771 NC_015572.1 822590 823333 D PFAM: PEP-CTERM bacterial; KEGG: mfa:Mfla_1122 hypothetical protein; hypothetical protein 822590..823333 Methylomonas methanica MC09 10670762 YP_004511712.1 CDS Metme_0773 NC_015572.1 826692 827774 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(826692..827774) Methylomonas methanica MC09 10670764 YP_004511713.1 CDS Metme_0774 NC_015572.1 827771 828271 R KEGG: pna:Pnap_1740 transposase; transposase complement(827771..828271) Methylomonas methanica MC09 10670765 YP_004511714.1 CDS Metme_0775 NC_015572.1 828527 829642 R PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein complement(828527..829642) Methylomonas methanica MC09 10670766 YP_004511715.1 CDS Metme_0776 NC_015572.1 830154 830447 R PFAM: Cell division protein ZapA-like; KEGG: tgr:Tgr7_2768 protein of unknown function DUF710; hypothetical protein complement(830154..830447) Methylomonas methanica MC09 10670768 YP_004511716.1 CDS Metme_0777 NC_015572.1 830444 830671 R TIGRFAM: Conserved hypothetical protein CHP02449; KEGG: nhl:Nhal_3714 hypothetical protein; hypothetical protein complement(830444..830671) Methylomonas methanica MC09 10670769 YP_004511717.1 CDS Metme_0778 NC_015572.1 830780 831304 D TIGRFAM: YgfB/YecA protein; KEGG: mca:MCA2771 hypothetical protein; hypothetical protein 830780..831304 Methylomonas methanica MC09 10670770 YP_004511718.1 CDS Metme_0779 NC_015572.1 831318 832628 D PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: mca:MCA2770 xaa-pro aminopeptidase; peptidase M24 831318..832628 Methylomonas methanica MC09 10670771 YP_004511719.1 CDS Metme_0780 NC_015572.1 832629 833837 D KEGG: mca:MCA2769 2-octaprenyl-6-methoxyphenol hydroxylase; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Lycopene beta/epsilon cyclase; 2-polyprenyl-6-methoxyphenol 4-hydroxylase 832629..833837 Methylomonas methanica MC09 10670772 YP_004511720.1 CDS Metme_0781 NC_015572.1 833892 834383 D KEGG: lch:Lcho_4278 phosphohistidine phosphatase, SixA; TIGRFAM: Phosphohistidine phosphatase SixA, subgroup; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase, SixA 833892..834383 Methylomonas methanica MC09 10670773 YP_004511721.1 CDS Metme_0782 NC_015572.1 834545 837286 D TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: nhl:Nhal_0500 preprotein translocase, SecA subunit; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif; protein translocase subunit secA 834545..837286 Methylomonas methanica MC09 10670774 YP_004511722.1 CDS Metme_0783 NC_015572.1 837404 839908 D KEGG: mca:MCA2540 glycogen phosphorylase; TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 837404..839908 Methylomonas methanica MC09 10670775 YP_004511723.1 CDS Metme_0784 NC_015572.1 839912 840382 D KEGG: RNA methyltransferase, TrmH family, group 2; TIGRFAM: RNA methyltransferase TrmH, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU; TrmH family RNA methyltransferase 839912..840382 Methylomonas methanica MC09 10670776 YP_004511724.1 CDS Metme_0785 NC_015572.1 840420 841067 D KEGG: avi:Avi_9528 hypothetical protein; hypothetical protein 840420..841067 Methylomonas methanica MC09 10670777 YP_004511725.1 CDS Metme_0786 NC_015572.1 841090 842172 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(841090..842172) Methylomonas methanica MC09 10670778 YP_004511726.1 CDS Metme_0787 NC_015572.1 842169 842669 R KEGG: pna:Pnap_1740 transposase; transposase complement(842169..842669) Methylomonas methanica MC09 10670779 YP_004511727.1 CDS Metme_0788 NC_015572.1 842694 842909 R hypothetical protein complement(842694..842909) Methylomonas methanica MC09 10670780 YP_004511728.1 CDS Metme_0789 NC_015572.1 843338 844183 R PFAM: Rhodanese-like; KEGG: nhl:Nhal_3777 rhodanese domain protein; SMART: Rhodanese-like; 3-mercaptopyruvate sulfurtransferase complement(843338..844183) Methylomonas methanica MC09 10670781 YP_004511729.1 CDS Metme_0790 NC_015572.1 844184 845161 R TIGRFAM: Quinone oxidoreductase , PIG3; KEGG: pla:Plav_2092 quinone oxidoreductase PIG3; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; NAD(P)H quinone oxidoreductase complement(844184..845161) Methylomonas methanica MC09 10670782 YP_004511730.1 CDS Metme_0791 NC_015572.1 845281 846309 D PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: cvi:CV_3695 N-acetyl-gamma-glutamyl-phosphate reductase; N-acetyl-gamma-glutamyl-phosphate reductase 845281..846309 Methylomonas methanica MC09 10670783 YP_004511731.1 CDS Metme_0792 NC_015572.1 846317 847444 R KEGG: nhl:Nhal_1102 protein of unknown function UPF0075; HAMAP: Anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase; anhydro-N-acetylmuramic acid kinase complement(846317..847444) Methylomonas methanica MC09 10670784 YP_004511732.1 CDS Metme_0793 NC_015572.1 847431 848720 R PFAM: Peptidase M23; KEGG: ttu:TERTU_0684 M23 peptidase domain protein; peptidase M23 complement(847431..848720) Methylomonas methanica MC09 10670785 YP_004511733.1 CDS Metme_0794 NC_015572.1 848863 850059 D SMART: RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; KEGG: mca:MCA0749 tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; tyrosyl-tRNA synthetase 848863..850059 Methylomonas methanica MC09 10670786 YP_004511734.1 CDS Metme_0795 NC_015572.1 855939 856727 D KEGG: vfm:VFMJ11_A0763 hypothetical protein; hypothetical protein 855939..856727 Methylomonas methanica MC09 10670792 YP_004511735.1 CDS Metme_0796 NC_015572.1 856736 857515 D PFAM: Alpha/beta hydrolase fold-1; KEGG: azl:AZL_a02710 abhydrolase domain-containing protein 11; alpha/beta hydrolase 856736..857515 Methylomonas methanica MC09 10670793 YP_004511736.1 CDS Metme_0797 NC_015572.1 857607 857855 D hypothetical protein 857607..857855 Methylomonas methanica MC09 10670794 YP_004511737.1 CDS Metme_0798 NC_015572.1 858033 859262 D KEGG: ote:Oter_0150 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; PFAM: Phosphofructokinase; diphosphate--fructose-6-phosphate 1-phosphotransferase 858033..859262 Methylomonas methanica MC09 10670795 YP_004511738.1 CDS Metme_0799 NC_015572.1 859317 859784 R PFAM: Protein of unknown function DUF1348; KEGG: rsl:RPSI07_2293 conserved hypothethical protein; hypothetical protein complement(859317..859784) Methylomonas methanica MC09 10670796 YP_004511739.1 CDS Metme_0800 NC_015572.1 859878 860474 D KEGG: pol:Bpro_2654 TetR family transcriptional regulator; manually curated; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; TetR family transcriptional regulator 859878..860474 Methylomonas methanica MC09 10670797 YP_004511740.1 CDS Metme_0801 NC_015572.1 860476 863193 R TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mca:MCA1761 cation-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; P-type HAD superfamily ATPase complement(860476..863193) Methylomonas methanica MC09 10670798 YP_004511741.1 CDS Metme_0802 NC_015572.1 863342 863548 D hypothetical protein 863342..863548 Methylomonas methanica MC09 10670799 YP_004511742.1 CDS Metme_0803 NC_015572.1 863610 864356 R PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: mca:MCA2211 HesA/MoeB/ThiF family protein; UBA/THIF-type NAD/FAD binding protein complement(863610..864356) Methylomonas methanica MC09 10670800 YP_004511743.1 CDS Metme_0804 NC_015572.1 864498 864785 D KEGG: tgr:Tgr7_0438 co-chaperonin GroES; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10; molecular chaperone GroES 864498..864785 Methylomonas methanica MC09 10670801 YP_004511744.1 CDS Metme_0805 NC_015572.1 864837 866486 D TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: mca:MCA0707 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL 864837..866486 Methylomonas methanica MC09 10670802 YP_004511745.1 CDS Metme_0806 NC_015572.1 866787 868334 D KEGG: azl:AZL_014340 hypothetical protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; serine/threonine protein kinase 866787..868334 Methylomonas methanica MC09 10670803 YP_004511746.1 CDS Metme_0807 NC_015572.1 868359 869297 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Forkhead-associated; KEGG: mxa:MXAN_5199 FHA/GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted; Forkhead-associated; diguanylate cyclase 868359..869297 Methylomonas methanica MC09 10670804 YP_004511747.1 CDS Metme_0808 NC_015572.1 869475 870290 D KEGG: ote:Oter_3778 hypothetical protein; hypothetical protein 869475..870290 Methylomonas methanica MC09 10670805 YP_004511748.1 CDS Metme_0809 NC_015572.1 870335 870997 R KEGG: psp:PSPPH_3940 hypothetical protein; hypothetical protein complement(870335..870997) Methylomonas methanica MC09 10670806 YP_004511749.1 CDS Metme_0810 NC_015572.1 870967 872220 R KEGG: swd:Swoo_2944 hypothetical protein; hypothetical protein complement(870967..872220) Methylomonas methanica MC09 10670807 YP_004511750.1 CDS Metme_0811 NC_015572.1 872217 873974 R KEGG: vap:Vapar_2987 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; integral membrane sensor signal transduction histidine kinase complement(872217..873974) Methylomonas methanica MC09 10670808 YP_004511751.1 CDS Metme_0812 NC_015572.1 873993 874721 R KEGG: vap:Vapar_2988 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator complement(873993..874721) Methylomonas methanica MC09 10670809 YP_004511752.1 CDS Metme_0813 NC_015572.1 874912 876315 R TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: rfr:Rfer_4034 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(874912..876315) Methylomonas methanica MC09 10670810 YP_004511753.1 CDS Metme_0814 NC_015572.1 876399 877856 R PFAM: Cation transporter; KEGG: mca:MCA2041 TrkH family potassium uptake protein; cation transporter complement(876399..877856) Methylomonas methanica MC09 10670811 YP_004511754.1 CDS Metme_0815 NC_015572.1 877908 878645 R KEGG: gca:Galf_0178 hypothetical protein; hypothetical protein complement(877908..878645) Methylomonas methanica MC09 10670812 YP_004511755.1 CDS Metme_0816 NC_015572.1 878877 879593 R PFAM: Protein of unknown function DUF2490; KEGG: nwa:Nwat_1502 hypothetical protein; hypothetical protein complement(878877..879593) Methylomonas methanica MC09 10670813 YP_004511756.1 CDS Metme_0817 NC_015572.1 880255 880728 D hypothetical protein 880255..880728 Methylomonas methanica MC09 10670814 YP_004511757.1 CDS Metme_0818 NC_015572.1 880774 881424 D PFAM: Protein of unknown function DUF2076; KEGG: mca:MCA1718 hypothetical protein; periplasmic ligand-binding sensor protein 880774..881424 Methylomonas methanica MC09 10670815 YP_004511758.1 CDS Metme_0819 NC_015572.1 881718 882758 D PFAM: Protein of unknown function DUF81; KEGG: mfa:Mfla_1552 hypothetical protein; hypothetical protein 881718..882758 Methylomonas methanica MC09 10670816 YP_004511759.1 CDS Metme_0820 NC_015572.1 883006 883479 D hypothetical protein 883006..883479 Methylomonas methanica MC09 10670817 YP_004511760.1 CDS Metme_0821 NC_015572.1 883490 883840 D hypothetical protein 883490..883840 Methylomonas methanica MC09 10670818 YP_004511761.1 CDS Metme_0822 NC_015572.1 883927 884841 D PFAM: Auxin efflux carrier; KEGG: nhl:Nhal_2017 auxin efflux carrier; auxin efflux carrier 883927..884841 Methylomonas methanica MC09 10670819 YP_004511762.1 CDS Metme_0823 NC_015572.1 884838 886067 D PFAM: Molybdopterin binding; KEGG: mca:MCA1092 molybdenum cofactor biosynthesis protein; molybdopterin binding domain-containing protein 884838..886067 Methylomonas methanica MC09 10670820 YP_004511763.1 CDS Metme_0824 NC_015572.1 886058 887950 D KEGG: mca:MCA0609 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 886058..887950 Methylomonas methanica MC09 10670821 YP_004511764.1 CDS Metme_0825 NC_015572.1 887998 889320 R KEGG: sde:Sde_1233 TRAP dicarboxylate transporter, DctM subunit; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(887998..889320) Methylomonas methanica MC09 10670822 YP_004511765.1 CDS Metme_0826 NC_015572.1 889699 890871 D HAMAP: Phosphoglycerate kinase; KEGG: nhl:Nhal_3448 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 889699..890871 Methylomonas methanica MC09 10670823 YP_004511766.1 CDS Metme_0827 NC_015572.1 891854 892066 R hypothetical protein complement(891854..892066) Methylomonas methanica MC09 10670825 YP_004511767.1 CDS Metme_0828 NC_015572.1 892268 895138 R HAMAP: Glutamate-ammonia-ligase adenylyltransferase; KEGG: mca:MCA2345 glutamate-ammonia-ligase adenylyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; glutamate-ammonia-ligase adenylyltransferase complement(892268..895138) Methylomonas methanica MC09 10670826 YP_004511768.1 CDS Metme_0829 NC_015572.1 895277 895894 R PFAM: Cation efflux protein; KEGG: mep:MPQ_1407 cation efflux protein; cation efflux protein complement(895277..895894) Methylomonas methanica MC09 10670827 YP_004511769.1 CDS Metme_0830 NC_015572.1 896346 897710 R KEGG: eba:p1B277 transposase; transposase complement(896346..897710) Methylomonas methanica MC09 10670828 YP_004511770.1 CDS Metme_0831 NC_015572.1 897854 898453 D hypothetical protein 897854..898453 Methylomonas methanica MC09 10670829 YP_004511771.1 CDS Metme_0832 NC_015572.1 898691 899257 R KEGG: ttu:TERTU_1552 hypothetical protein; hypothetical protein complement(898691..899257) Methylomonas methanica MC09 10670830 YP_004511772.1 CDS Metme_0833 NC_015572.1 899319 899654 R KEGG: ttu:TERTU_1553 hypothetical protein; hypothetical protein complement(899319..899654) Methylomonas methanica MC09 10670831 YP_004511773.1 CDS Metme_0835 NC_015572.1 902906 904089 R KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(join(902906..903826,903826..904089)) Methylomonas methanica MC09 10670833 YP_004511774.1 CDS Metme_0836 NC_015572.1 904506 905360 D PFAM: Mechanosensitive ion channel MscS; KEGG: hch:HCH_06695 small-conductance mechanosensitive channel; mechanosensitive ion channel MscS 904506..905360 Methylomonas methanica MC09 10670834 YP_004511775.1 CDS Metme_0837 NC_015572.1 905347 906726 D SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: mca:MCA1556 F0F1 ATP synthase subunit beta; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta 905347..906726 Methylomonas methanica MC09 10670835 YP_004511776.1 CDS Metme_0838 NC_015572.1 906723 907127 D KEGG: nhl:Nhal_2241 H+transporting two-sector ATPase delta/epsilon subunit; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATP synthase F1 subunit epsilon 906723..907127 Methylomonas methanica MC09 10670836 YP_004511777.1 CDS Metme_0839 NC_015572.1 907130 907402 D PFAM: F0F1-ATPase subunit, KEGG: ppd:Ppro_0849 ATP synthase I; F0F1-ATPase subunit 907130..907402 Methylomonas methanica MC09 10670837 YP_004511778.1 CDS Metme_0840 NC_015572.1 907409 908101 D TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: nhl:Nhal_2239 ATP synthase F0, A subunit; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 907409..908101 Methylomonas methanica MC09 10670838 YP_004511779.1 CDS Metme_0841 NC_015572.1 908098 908364 D TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: lpa:lpa_01627 ATP synthase C subunit (H transporting ATP synthase); PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c 908098..908364 Methylomonas methanica MC09 10670839 YP_004511780.1 CDS Metme_0842 NC_015572.1 908493 908810 R hypothetical protein complement(908493..908810) Methylomonas methanica MC09 10670840 YP_004511781.1 CDS Metme_0843 NC_015572.1 909322 910386 D PFAM: Endonuclease/exonuclease/phosphatase; hypothetical protein 909322..910386 Methylomonas methanica MC09 10670841 YP_004511782.1 CDS Metme_0844 NC_015572.1 910498 911250 D KEGG: app:CAP2UW1_2681 H+transporting two-sector ATPase B/B' subunit; HAMAP: ATP synthase subunit b; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 910498..911250 Methylomonas methanica MC09 10670842 YP_004511783.1 CDS Metme_0845 NC_015572.1 911243 912682 D TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: mca:MCA2707 F0F1 ATP synthase subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATP synthase subunit alpha 911243..912682 Methylomonas methanica MC09 10670843 YP_004511784.1 CDS Metme_0846 NC_015572.1 912679 913491 D KEGG: mca:MCA2708 ATP synthase F1, gamma subunit; ATP synthase F1 subunit gamma 912679..913491 Methylomonas methanica MC09 10670844 YP_004511785.1 CDS Metme_0847 NC_015572.1 913546 914097 R KEGG: mca:MCA1290 hypothetical protein; hypothetical protein complement(913546..914097) Methylomonas methanica MC09 10670845 YP_004511786.1 CDS Metme_0848 NC_015572.1 914136 914303 D hypothetical protein 914136..914303 Methylomonas methanica MC09 10670846 YP_004511787.1 CDS Metme_0849 NC_015572.1 914912 915655 D KEGG: fbl:Fbal_0840 multi-sensor hybrid histidine kinase; PFAM: Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction response regulator, receiver region; response regulator receiver and Hpt phospho transfer protein 914912..915655 Methylomonas methanica MC09 10670847 YP_004511788.1 CDS Metme_0850 NC_015572.1 915765 916805 D KEGG: pmy:Pmen_2321 ImpA domain-containing protein; TIGRFAM: Type VI secretion system-associated, ImpA; PFAM: ImpA, N-terminal; type VI secretion-associated protein, ImpA family 915765..916805 Methylomonas methanica MC09 10670848 YP_004511789.1 CDS Metme_0851 NC_015572.1 916832 917368 D KEGG: azo:azo3895 cytoplasmic protein,SciH; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301; type VI secretion protein 916832..917368 Methylomonas methanica MC09 10670849 YP_004511790.1 CDS Metme_0852 NC_015572.1 917372 918862 D KEGG: psl:Psta_1832 type VI secretion protein, EvpB/VC_A0108 family; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877; type VI secretion protein 917372..918862 Methylomonas methanica MC09 10670850 YP_004511791.1 CDS Metme_0853 NC_015572.1 918983 919465 D KEGG: azo:azo3897 cytoplasmic protein SciM; TIGRFAM: Type VI secretion system effector, Hcp1; PFAM: Virulence factor, secretion apparatus; type VI secretion system effector 918983..919465 Methylomonas methanica MC09 10670851 YP_004511792.1 CDS Metme_0854 NC_015572.1 919535 920344 D PFAM: virulence protein, SciE type; KEGG: psl:Psta_1834 virulence protein SciE type; virulence protein SciE type 919535..920344 Methylomonas methanica MC09 10670852 YP_004511793.1 CDS Metme_0855 NC_015572.1 920347 920850 D KEGG: xac:XAC4143 hypothetical protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25; type VI secretion system lysozyme-like protein 920347..920850 Methylomonas methanica MC09 10670853 YP_004511794.1 CDS Metme_0856 NC_015572.1 920853 922736 D KEGG: psl:Psta_1836 type VI secretion protein, VC_A0110 family; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110; type VI secretion protein 920853..922736 Methylomonas methanica MC09 10670854 YP_004511795.1 CDS Metme_0857 NC_015572.1 922700 923764 D KEGG: psl:Psta_1837 type VI secretion protein, VC_A0111 family; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function DUF1305; type VI secretion protein 922700..923764 Methylomonas methanica MC09 10670855 YP_004511796.1 CDS Metme_0858 NC_015572.1 923804 926524 D TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: pau:PA14_01100 ClpA/B-type chaperone; SMART: ATPase, AAA+ type, core; type VI secretion ATPase, ClpV1 family 923804..926524 Methylomonas methanica MC09 10670856 YP_004511797.1 CDS Metme_0859 NC_015572.1 926790 927809 D hypothetical protein 926790..927809 Methylomonas methanica MC09 10670857 YP_004511798.1 CDS Metme_0860 NC_015572.1 927895 928224 D hypothetical protein 927895..928224 Methylomonas methanica MC09 10670858 YP_004511799.1 CDS Metme_0861 NC_015572.1 928491 929525 D hypothetical protein 928491..929525 Methylomonas methanica MC09 10670859 YP_004511800.1 CDS Metme_0862 NC_015572.1 929576 929917 D hypothetical protein 929576..929917 Methylomonas methanica MC09 10670860 YP_004511801.1 CDS Metme_0863 NC_015572.1 929953 930384 D hypothetical protein 929953..930384 Methylomonas methanica MC09 10670861 YP_004511802.1 CDS Metme_0864 NC_015572.1 930458 931807 D PFAM: Methyltransferase type 12; Tetratricopeptide TPR-1; Tetratricopeptide TPR-3; KEGG: lch:Lcho_4081 methyltransferase type 12; type 12 methyltransferase 930458..931807 Methylomonas methanica MC09 10670862 YP_004511803.1 CDS Metme_0865 NC_015572.1 932176 932835 D TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 932176..932835 Methylomonas methanica MC09 10670863 YP_004511804.1 CDS Metme_0866 NC_015572.1 932868 933563 D TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 932868..933563 Methylomonas methanica MC09 10670864 YP_004511805.1 CDS Metme_0867 NC_015572.1 933698 934741 R TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: mca:MCA0373 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase complement(933698..934741) Methylomonas methanica MC09 10670865 YP_004511806.1 CDS Metme_0868 NC_015572.1 934829 935641 D PFAM: Protein of unknown function DUF2066; KEGG: kko:Kkor_1683 hypothetical protein; hypothetical protein 934829..935641 Methylomonas methanica MC09 10670866 YP_004511807.1 CDS Metme_0869 NC_015572.1 935732 936838 R TIGRFAM: Isopropylmalate dehydrogenase; KEGG: pin:Ping_2229 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(935732..936838) Methylomonas methanica MC09 10670867 YP_004511808.1 CDS Metme_0870 NC_015572.1 937037 938611 D KEGG: alv:Alvin_2959 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; (R)-citramalate synthase 937037..938611 Methylomonas methanica MC09 10670868 YP_004511809.1 CDS Metme_0871 NC_015572.1 938608 939054 R hypothetical protein complement(938608..939054) Methylomonas methanica MC09 10670869 YP_004511810.1 CDS Metme_0872 NC_015572.1 939185 940252 D PFAM: Integrase, catalytic core; KEGG: azl:AZL_b03960 transposase; integrase catalytic subunit 939185..940252 Methylomonas methanica MC09 10670870 YP_004511811.1 CDS Metme_0873 NC_015572.1 940349 942577 D KEGG: tgr:Tgr7_2074 glycogen branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; HAMAP: 1,4-alpha-glucan branching enzyme, core region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; 1,4-alpha-glucan-branching protein 940349..942577 Methylomonas methanica MC09 10670871 YP_004511812.1 CDS Metme_0874 NC_015572.1 942790 945117 R KEGG: sse:Ssed_3289 PKD repeat-containing protein; PFAM: PKD; Peptidase, C-terminal, archaeal/bacterial; SMART: PKD; PKD domain-containing protein complement(942790..945117) Methylomonas methanica MC09 10670872 YP_004511813.1 CDS Metme_0875 NC_015572.1 945237 945485 D hypothetical protein 945237..945485 Methylomonas methanica MC09 10670873 YP_004511814.1 CDS Metme_0876 NC_015572.1 945552 946052 R hypothetical protein complement(945552..946052) Methylomonas methanica MC09 10670874 YP_004511815.1 CDS Metme_0877 NC_015572.1 946073 947431 R KEGG: mca:MCA1019 hypothetical protein; hypothetical protein complement(946073..947431) Methylomonas methanica MC09 10670875 YP_004511816.1 CDS Metme_0878 NC_015572.1 947670 949181 R PFAM: Transposase, IS4-like; KEGG: mac:MA1045 transposase; transposase IS4 family protein complement(947670..949181) Methylomonas methanica MC09 10670876 YP_004511817.1 CDS Metme_0879 NC_015572.1 949345 950760 R TIGRFAM: Signal transduction response regulator, nitrogen regulation NR(I); PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; KEGG: mca:MCA2541 nitrogen regulation protein NR(I); SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator complement(949345..950760) Methylomonas methanica MC09 10670877 YP_004511818.1 CDS Metme_0880 NC_015572.1 950808 951875 R KEGG: mca:MCA2542 nitrogen regulation protein NR(II); PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; signal transduction histidine kinase, nitrogen specific, NtrB complement(950808..951875) Methylomonas methanica MC09 10670878 YP_004511819.1 CDS Metme_0881 NC_015572.1 952027 952392 R KEGG: mca:MCA0489 hypothetical protein; hypothetical protein complement(952027..952392) Methylomonas methanica MC09 10670879 YP_004511820.1 CDS Metme_0882 NC_015572.1 952437 953735 R KEGG: mca:MCA0490 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter; ammonium transporter complement(952437..953735) Methylomonas methanica MC09 10670880 YP_004511821.1 CDS Metme_0883 NC_015572.1 954156 954362 R manually curated; HAMAP: Protein slyX; KEGG: abo:ABO_2672 hypothetical protein; PFAM: SlyX; protein slyX complement(954156..954362) Methylomonas methanica MC09 10670881 YP_004511822.1 CDS Metme_0884 NC_015572.1 954483 954785 D KEGG: mca:MCA0564 hypothetical protein; hypothetical protein 954483..954785 Methylomonas methanica MC09 10670882 YP_004511823.1 CDS Metme_0885 NC_015572.1 954796 955644 D KEGG: tgr:Tgr7_0496 hypothetical protein; hypothetical protein 954796..955644 Methylomonas methanica MC09 10670883 YP_004511824.1 CDS Metme_0886 NC_015572.1 955657 956724 D KEGG: mca:MCA1876 homoserine O-succinyltransferase; PFAM: Homoserine O-succinyltransferase; Homoserine O-succinyltransferase 955657..956724 Methylomonas methanica MC09 10670884 YP_004511825.1 CDS Metme_0887 NC_015572.1 956725 957189 D KEGG: bld:BLi01418 GuaD; PFAM: CMP/dCMP deaminase, zinc-binding; guanine deaminase 956725..957189 Methylomonas methanica MC09 10670885 YP_004511826.1 CDS Metme_0888 NC_015572.1 957452 958303 D KEGG: mfa:Mfla_2096 hypothetical protein; hypothetical protein 957452..958303 Methylomonas methanica MC09 10670886 YP_004511827.1 CDS Metme_0889 NC_015572.1 958308 958781 R hypothetical protein complement(958308..958781) Methylomonas methanica MC09 10670887 YP_004511828.1 CDS Metme_0890 NC_015572.1 958957 959523 D TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; HAMAP: ATP-dependent protease hslV; KEGG: alv:Alvin_2979 20S proteasome subunits A/B; PFAM: Proteasome, subunit alpha/beta; ATP-dependent protease hslV 958957..959523 Methylomonas methanica MC09 10670888 YP_004511829.1 CDS Metme_0891 NC_015572.1 959492 960847 D SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: mca:MCA2015 ATP-dependent protease ATP-binding subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2; ATP-dependent hsl protease ATP-binding subunit hslU 959492..960847 Methylomonas methanica MC09 10670889 YP_004511830.1 CDS Metme_0892 NC_015572.1 960851 961240 D PFAM: Protein of unknown function DUF971; KEGG: mep:MPQ_2020 hypothetical protein; hypothetical protein 960851..961240 Methylomonas methanica MC09 10670890 YP_004511831.1 CDS Metme_0893 NC_015572.1 961249 961998 D TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: mca:MCA2017 ubiquinone/menaquinone biosynthesis methlytransferase UbiE; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase ubiE 961249..961998 Methylomonas methanica MC09 10670891 YP_004511832.1 CDS Metme_0894 NC_015572.1 962062 962706 D PFAM: Sterol-binding; KEGG: alv:Alvin_2975 sterol-binding domain-containing protein; Sterol-binding domain-containing protein 962062..962706 Methylomonas methanica MC09 10670892 YP_004511833.1 CDS Metme_0895 NC_015572.1 962723 964300 D TIGRFAM: 2-polyprenylphenol 6-hydroxylase; HAMAP: ubiquinone biosynthesis protein ubiB; KEGG: mca:MCA2019 ubiquinone biosynthesis protein AarF; PFAM: ABC-1; ubiquinone biosynthesis protein ubiB 962723..964300 Methylomonas methanica MC09 10670893 YP_004511834.1 CDS Metme_0896 NC_015572.1 964302 964475 R hypothetical protein complement(964302..964475) Methylomonas methanica MC09 10670894 YP_004511835.1 CDS Metme_0897 NC_015572.1 964658 966202 D TIGRFAM: Bacterial 2-isopropylmalate synthase; KEGG: mca:MCA2275 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; 2-isopropylmalate synthase 964658..966202 Methylomonas methanica MC09 10670895 YP_004511836.1 CDS Metme_0898 NC_015572.1 966215 967081 D KEGG: mca:MCA2276 phage SPO1 DNA polymerase-related protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; phage SPO1 DNA polymerase-like protein 966215..967081 Methylomonas methanica MC09 10670896 YP_004511837.1 CDS Metme_0899 NC_015572.1 967084 967641 D KEGG: mca:MCA2277 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 967084..967641 Methylomonas methanica MC09 10670897 YP_004511838.1 CDS Metme_0900 NC_015572.1 967731 968258 R hypothetical protein complement(967731..968258) Methylomonas methanica MC09 10670898 YP_004511839.1 CDS Metme_0901 NC_015572.1 968555 969103 D KEGG: tgr:Tgr7_0224 general secretion pathway protein C; hypothetical protein 968555..969103 Methylomonas methanica MC09 10670899 YP_004511840.1 CDS Metme_0902 NC_015572.1 969131 970996 D KEGG: aeh:Mlg_2401 general secretion pathway protein D; TIGRFAM: Type II secretion system gspD; PFAM: Type II/III secretion system; NolW-like; general secretion pathway protein D 969131..970996 Methylomonas methanica MC09 10670900 YP_004511841.1 CDS Metme_0903 NC_015572.1 970968 972509 D TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; KEGG: tgr:Tgr7_0226 general secretory pathway protein E; SMART: ATPase, AAA+ type, core; general secretory pathway protein E 970968..972509 Methylomonas methanica MC09 10670901 YP_004511842.1 CDS Metme_0904 NC_015572.1 972513 973724 D KEGG: tgr:Tgr7_0227 general secretion pathway protein F; TIGRFAM: General secretion pathway protein F; PFAM: Type II secretion system F domain; general secretion pathway protein F 972513..973724 Methylomonas methanica MC09 10670902 YP_004511843.1 CDS Metme_0905 NC_015572.1 974073 975401 D PFAM: Protein of unknown function DUF2254, membrane; KEGG: nhl:Nhal_1595 hypothetical protein; hypothetical protein 974073..975401 Methylomonas methanica MC09 10670903 YP_004511844.1 CDS Metme_0906 NC_015572.1 975473 976840 D PFAM: Mechanosensitive ion channel MscS; Transport-associated; KEGG: mct:MCR_0648 mechanosensitive ion channel family protein MscS; mechanosensitive ion channel MscS 975473..976840 Methylomonas methanica MC09 10670904 YP_004511845.1 CDS Metme_0907 NC_015572.1 976943 977947 D KEGG: sde:Sde_2942 hypothetical protein; hypothetical protein 976943..977947 Methylomonas methanica MC09 10670905 YP_004511846.1 CDS Metme_0908 NC_015572.1 977908 978627 D PFAM: Peptidase C26; KEGG: sde:Sde_2941 glutamine amidotransferase related enzyme; peptidase C26 977908..978627 Methylomonas methanica MC09 10670906 YP_004511847.1 CDS Metme_0909 NC_015572.1 978620 979051 D PFAM: SNARE associated Golgi protein; KEGG: sde:Sde_2940 hypothetical protein; hypothetical protein 978620..979051 Methylomonas methanica MC09 10670907 YP_004511848.1 CDS Metme_0910 NC_015572.1 979198 980808 R KEGG: cyh:Cyan8802_2478 protein of unknown function DUF1555; hypothetical protein complement(979198..980808) Methylomonas methanica MC09 10670908 YP_004511849.1 CDS Metme_0911 NC_015572.1 981057 981509 D KEGG: pmy:Pmen_2923 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; general secretion pathway protein G 981057..981509 Methylomonas methanica MC09 10670909 YP_004511850.1 CDS Metme_0912 NC_015572.1 981518 982024 D TIGRFAM: General secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal; KEGG: aeh:Mlg_2390 general secretion pathway protein H; general secretion pathway protein H 981518..982024 Methylomonas methanica MC09 10670910 YP_004511851.1 CDS Metme_0913 NC_015572.1 982021 982515 D KEGG: pmy:Pmen_2921 general secretion pathway protein I; TIGRFAM: General secretion pathway protein I; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein I/J; Prepilin-type cleavage/methylation, N-terminal; general secretion pathway protein I 982021..982515 Methylomonas methanica MC09 10670911 YP_004511852.1 CDS Metme_0914 NC_015572.1 982512 983093 D TIGRFAM: General secretion pathway protein J; Prepilin-type cleavage/methylation, N-terminal; KEGG: pag:PLES_19621 general secretion pathway protein J; general secretion pathway protein J 982512..983093 Methylomonas methanica MC09 10670912 YP_004511853.1 CDS Metme_0915 NC_015572.1 983090 983998 D KEGG: dak:DaAHT2_2261 general secretion pathway protein K; general secretion pathway protein K 983090..983998 Methylomonas methanica MC09 10670913 YP_004511854.1 CDS Metme_0916 NC_015572.1 984006 985184 D KEGG: dak:DaAHT2_2262 general secretion pathway protein L; TIGRFAM: General secretion pathway L; PFAM: General secretion pathway L; general secretion pathway protein L 984006..985184 Methylomonas methanica MC09 10670914 YP_004511855.1 CDS Metme_0917 NC_015572.1 985165 985683 D PFAM: General secretion pathway M protein; KEGG: hha:Hhal_2387 general secretion pathway M protein; general secretion pathway protein M 985165..985683 Methylomonas methanica MC09 10670915 YP_004511856.1 CDS Metme_0918 NC_015572.1 986268 987062 D PFAM: PEP-CTERM bacterial; hypothetical protein 986268..987062 Methylomonas methanica MC09 10670916 YP_004511857.1 CDS Metme_0919 NC_015572.1 987120 988673 D KEGG: tbd:Tbd_0353 hypothetical protein; hypothetical protein 987120..988673 Methylomonas methanica MC09 10670917 YP_004511858.1 CDS Metme_0920 NC_015572.1 988946 990580 D PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: mca:MCA2226 hypothetical protein; polypeptide-transport-associated domain-containing protein 988946..990580 Methylomonas methanica MC09 10670918 YP_004511859.1 CDS Metme_0921 NC_015572.1 990758 1001173 D KEGG: mca:MCA2227 hemagglutinin-related protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; filamentous hemagglutinin 990758..1001173 Methylomonas methanica MC09 10670919 YP_004511860.1 CDS Metme_0922 NC_015572.1 1001376 1003163 D PFAM: MotA/TolQ/ExbB proton channel; Protein of unknown function DUF2341; KEGG: mca:MCA2238 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel 1001376..1003163 Methylomonas methanica MC09 10670920 YP_004511861.1 CDS Metme_0923 NC_015572.1 1003186 1003590 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nmu:Nmul_A2569 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1003186..1003590 Methylomonas methanica MC09 10670921 YP_004511862.1 CDS Metme_0924 NC_015572.1 1003596 1004252 D KEGG: mca:MCA2236 TonB-dependent receptor; TonB-dependent receptor 1003596..1004252 Methylomonas methanica MC09 10670922 YP_004511863.1 CDS Metme_0925 NC_015572.1 1004278 1005993 D KEGG: mca:MCA2235 hypothetical protein; hypothetical protein 1004278..1005993 Methylomonas methanica MC09 10670923 YP_004511864.1 CDS Metme_0926 NC_015572.1 1006006 1006662 D KEGG: tbd:Tbd_0362 hypothetical protein; hypothetical protein 1006006..1006662 Methylomonas methanica MC09 10670924 YP_004511865.1 CDS Metme_0927 NC_015572.1 1006859 1007383 R PFAM: DbpA, RNA-binding; KEGG: ttu:TERTU_2534 cold-shock DEAD box protein A DbpA; DbpA RNA-binding domain-containing protein complement(1006859..1007383) Methylomonas methanica MC09 10670925 YP_004511866.1 CDS Metme_0928 NC_015572.1 1007399 1008646 R KEGG: mca:MCA0602 peptidyl-prolyl cis-trans isomerase SurA; HAMAP: Chaperone surA; PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type; Chaperone surA complement(1007399..1008646) Methylomonas methanica MC09 10670926 YP_004511867.1 CDS Metme_0929 NC_015572.1 1008693 1011560 R KEGG: mca:MCA0601 organic solvent tolerance protein, HAMAP: LPS-assembly protein lptD; PFAM: Organic solvent tolerance protein; OstA-like protein; LPS-assembly protein lptD complement(1008693..1011560) Methylomonas methanica MC09 10670927 YP_004511868.1 CDS Metme_0930 NC_015572.1 1011653 1012654 D PFAM: Aminoglycoside phosphotransferase; KEGG: mca:MCA0600 hypothetical protein; aminoglycoside phosphotransferase 1011653..1012654 Methylomonas methanica MC09 10670928 YP_004511869.1 CDS Metme_0931 NC_015572.1 1012651 1013325 D PFAM: Nucleotidyl transferase; KEGG: lhk:LHK_03191 nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); nucleotidyl transferase 1012651..1013325 Methylomonas methanica MC09 10670929 YP_004511870.1 CDS Metme_0932 NC_015572.1 1013454 1015940 D KEGG: nhl:Nhal_2514 hypothetical protein; hypothetical protein 1013454..1015940 Methylomonas methanica MC09 10670930 YP_004511871.1 CDS Metme_0933 NC_015572.1 1015955 1016293 D KEGG: nhl:Nhal_2515 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 1015955..1016293 Methylomonas methanica MC09 10670931 YP_004511872.1 CDS Metme_0934 NC_015572.1 1016290 1016940 D PFAM: GrpE nucleotide exchange factor; KEGG: hha:Hhal_0144 GrpE protein; heat shock protein GrpE 1016290..1016940 Methylomonas methanica MC09 10670932 YP_004511873.1 CDS Metme_0935 NC_015572.1 1016956 1018695 D PFAM: Heat shock protein 70; KEGG: nhl:Nhal_2517 heat shock protein 70; molecular chaperone DnaK 1016956..1018695 Methylomonas methanica MC09 10670933 YP_004511874.1 CDS Metme_0936 NC_015572.1 1018695 1019120 D KEGG: nhl:Nhal_2518 hypothetical protein; hypothetical protein 1018695..1019120 Methylomonas methanica MC09 10670934 YP_004511875.1 CDS Metme_0937 NC_015572.1 1019390 1020337 D hypothetical protein 1019390..1020337 Methylomonas methanica MC09 10670935 YP_004511876.1 CDS Metme_0938 NC_015572.1 1020344 1021519 R PFAM: Protein of unknown function DUF482; KEGG: hch:HCH_00354 hypothetical protein; hypothetical protein complement(1020344..1021519) Methylomonas methanica MC09 10670936 YP_004511877.1 CDS Metme_0939 NC_015572.1 1021570 1022199 D PFAM: Protein of unknown function DUF938; KEGG: pha:PSHAa0049 methylase; hypothetical protein 1021570..1022199 Methylomonas methanica MC09 10670937 YP_004511878.1 CDS Metme_0940 NC_015572.1 1022378 1022839 D KEGG: bid:Bind_3575 amine oxidase; amine oxidase 1022378..1022839 Methylomonas methanica MC09 10670938 YP_004511879.1 CDS Metme_0941 NC_015572.1 1022836 1023456 D PFAM: Glutathione S-transferase, N-terminal; KEGG: avn:Avin_48720 glutathione S-transferase; glutathione S-transferase domain-containing protein 1022836..1023456 Methylomonas methanica MC09 10670939 YP_004511880.1 CDS Metme_0942 NC_015572.1 1023486 1023881 D KEGG: ttu:TERTU_1569 hemerythrin metal-binding domain protein; TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Haemerythrin/HHE cation-binding motif; hemerythrin-like metal-binding protein 1023486..1023881 Methylomonas methanica MC09 10670940 YP_004511881.1 CDS Metme_0943 NC_015572.1 1023885 1024472 D KEGG: azo:azo2783 DNA repair system specific for alkylated DNA; DNA repair system specific for alkylated DNA 1023885..1024472 Methylomonas methanica MC09 10670941 YP_004511882.1 CDS Metme_0944 NC_015572.1 1024631 1025413 D hypothetical protein 1024631..1025413 Methylomonas methanica MC09 10670942 YP_004511883.1 CDS Metme_0945 NC_015572.1 1025462 1026301 R PFAM: CHAD; KEGG: hau:Haur_4676 CHAD domain-containing protein; CHAD domain-containing protein complement(1025462..1026301) Methylomonas methanica MC09 10670943 YP_004511884.1 CDS Metme_0946 NC_015572.1 1026309 1027082 R KEGG: mca:MCA2273 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(1026309..1027082) Methylomonas methanica MC09 10670944 YP_004511885.1 CDS Metme_0947 NC_015572.1 1027167 1028042 R KEGG: pat:Patl_2401 hypothetical protein; hypothetical protein complement(1027167..1028042) Methylomonas methanica MC09 10670945 YP_004511886.1 CDS Metme_0948 NC_015572.1 1028123 1028743 R manually curated; KEGG: hypothetical protein; hypothetical protein complement(1028123..1028743) Methylomonas methanica MC09 10670946 YP_004511887.1 CDS Metme_0949 NC_015572.1 1028823 1029605 R PFAM: Nucleoside-specific channel-forming protein, Tsx-like; KEGG: gem:GM21_3976 nucleoside-specific channel-forming protein Tsx; Nucleoside-specific channel-forming protein, Tsx-like protein complement(1028823..1029605) Methylomonas methanica MC09 10670947 YP_004511888.1 CDS Metme_0950 NC_015572.1 1029675 1030691 R PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: sde:Sde_2539 ketol-acid reductoisomerase; ketol-acid reductoisomerase complement(1029675..1030691) Methylomonas methanica MC09 10670948 YP_004511889.1 CDS Metme_0951 NC_015572.1 1030796 1031287 R TIGRFAM: Acetolactate synthase, small subunit; KEGG: mca:MCA2271 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; acetolactate synthase small subunit complement(1030796..1031287) Methylomonas methanica MC09 10670949 YP_004511890.1 CDS Metme_0952 NC_015572.1 1031288 1033024 R TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: mca:MCA2270 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase large subunit, biosynthetic type complement(1031288..1033024) Methylomonas methanica MC09 10670950 YP_004511891.1 CDS Metme_0954 NC_015572.1 1033839 1034639 R PFAM: ABC transporter-like; KEGG: alv:Alvin_1691 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; iron-chelate-transporting ATPase complement(1033839..1034639) Methylomonas methanica MC09 10670952 YP_004511892.1 CDS Metme_0955 NC_015572.1 1034641 1035735 R PFAM: Bacterial transport system permease; KEGG: tra:Trad_1157 transport system permease; ABC transporter permease complement(1034641..1035735) Methylomonas methanica MC09 10670953 YP_004511893.1 CDS Metme_0956 NC_015572.1 1035739 1036620 R PFAM: Periplasmic binding protein; KEGG: pla:Plav_0182 periplasmic binding protein; ABC transporter substrate-binding protein complement(1035739..1036620) Methylomonas methanica MC09 10670954 YP_004511894.1 CDS Metme_0957 NC_015572.1 1036653 1037186 R PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: vex:VEA_001358 pyridoxamine 5'-phosphate oxidase-related heme iron utilization protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(1036653..1037186) Methylomonas methanica MC09 10670955 YP_004511895.1 CDS Metme_0958 NC_015572.1 1037221 1038231 R PFAM: Haemin-degrading; KEGG: mxa:MXAN_1318 hemin transport protein HemS; hemin-degrading family protein complement(1037221..1038231) Methylomonas methanica MC09 10670956 YP_004511896.1 CDS Metme_0959 NC_015572.1 1038316 1039044 R KEGG: neu:NE0726 hypothetical protein; TIGRFAM: variant PEP-CTERM exosortase signal; PFAM: PEP-CTERM bacterial; variant PEP-CTERM exosortase signal complement(1038316..1039044) Methylomonas methanica MC09 10670957 YP_004511897.1 CDS Metme_0960 NC_015572.1 1039304 1039516 R KEGG: mep:MPQ_1703 hypothetical protein; hypothetical protein complement(1039304..1039516) Methylomonas methanica MC09 10670958 YP_004511898.1 CDS Metme_0961 NC_015572.1 1039529 1041889 R KEGG: smt:Smal_0645 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TIGRFAM: TonB-dependent haemoglobin/transferrin/lactoferrin receptor; TonB-dependent haem/haemoglobin receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor complement(1039529..1041889) Methylomonas methanica MC09 10670959 YP_004511899.1 CDS Metme_0962 NC_015572.1 1041889 1042041 R hypothetical protein complement(1041889..1042041) Methylomonas methanica MC09 10670960 YP_004511900.1 CDS Metme_0963 NC_015572.1 1042230 1042421 R PFAM: Hemin uptake protein hemP; KEGG: nhl:Nhal_1730 hypothetical protein; hemin uptake protein HemP complement(1042230..1042421) Methylomonas methanica MC09 10670961 YP_004511901.1 CDS Metme_0964 NC_015572.1 1042430 1042702 R KEGG: nwa:Nwat_0692 hypothetical protein; hypothetical protein complement(1042430..1042702) Methylomonas methanica MC09 10670962 YP_004511902.1 CDS Metme_0965 NC_015572.1 1042895 1043785 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: hba:Hbal_2657 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1042895..1043785) Methylomonas methanica MC09 10670963 YP_004511903.1 CDS Metme_0966 NC_015572.1 1043954 1044475 D PFAM: Redoxin; KEGG: hoh:Hoch_6651 redoxin domain protein; redoxin domain-containing protein 1043954..1044475 Methylomonas methanica MC09 10670964 YP_004511904.1 CDS Metme_0967 NC_015572.1 1044545 1045903 D KEGG: pmy:Pmen_2351 glutathione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; glutathione-disulfide reductase 1044545..1045903 Methylomonas methanica MC09 10670965 YP_004511905.1 CDS Metme_0968 NC_015572.1 1046020 1047192 D KEGG: nhl:Nhal_1811 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 1046020..1047192 Methylomonas methanica MC09 10670966 YP_004511906.1 CDS Metme_0969 NC_015572.1 1047185 1048261 D PFAM: Metallophosphoesterase; KEGG: metallophosphoesterase; metallophosphoesterase 1047185..1048261 Methylomonas methanica MC09 10670967 YP_004511907.1 CDS Metme_0970 NC_015572.1 1048279 1048689 D KEGG: cytochrome c family protein; hypothetical protein 1048279..1048689 Methylomonas methanica MC09 10670968 YP_004511908.1 CDS Metme_0971 NC_015572.1 1048906 1049193 D KEGG: nmu:Nmul_A2196 hypothetical protein; hypothetical protein 1048906..1049193 Methylomonas methanica MC09 10670969 YP_004511909.1 CDS Metme_0972 NC_015572.1 1049476 1049910 D KEGG: swd:Swoo_3897 hypothetical protein; hypothetical protein 1049476..1049910 Methylomonas methanica MC09 10670970 YP_004511910.1 CDS Metme_0973 NC_015572.1 1050090 1050845 D manually curated; KEGG: sbn:Sbal195_2286 hypothetical protein; hypothetical protein 1050090..1050845 Methylomonas methanica MC09 10670971 YP_004511911.1 CDS Metme_0974 NC_015572.1 1050802 1050942 D hypothetical protein 1050802..1050942 Methylomonas methanica MC09 10670972 YP_004511912.1 CDS Metme_0975 NC_015572.1 1050932 1051642 D KEGG: sdl:Sdel_0723 hypothetical protein; hypothetical protein 1050932..1051642 Methylomonas methanica MC09 10670973 YP_004511913.1 CDS Metme_0976 NC_015572.1 1052208 1053038 D PFAM: PEP-CTERM bacterial; hypothetical protein 1052208..1053038 Methylomonas methanica MC09 10670974 YP_004511914.1 CDS Metme_0977 NC_015572.1 1053390 1054901 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; PAS fold-4; KEGG: dvm:DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase 1053390..1054901 Methylomonas methanica MC09 10670975 YP_004511915.1 CDS Metme_0978 NC_015572.1 1054984 1055589 R hypothetical protein complement(1054984..1055589) Methylomonas methanica MC09 10670976 YP_004511916.1 CDS Metme_0979 NC_015572.1 1056280 1056669 D KEGG: mca:MCA1546 hypothetical protein; hypothetical protein 1056280..1056669 Methylomonas methanica MC09 10670977 YP_004511917.1 CDS Metme_0980 NC_015572.1 1056674 1056892 R hypothetical protein complement(1056674..1056892) Methylomonas methanica MC09 10670978 YP_004511918.1 CDS Metme_0981 NC_015572.1 1056909 1057709 R TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: mmb:Mmol_2247 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III complement(1056909..1057709) Methylomonas methanica MC09 10670979 YP_004511919.1 CDS Metme_0982 NC_015572.1 1057882 1060509 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: pmy:Pmen_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; GAF; PAC motif; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 1057882..1060509 Methylomonas methanica MC09 10670980 YP_004511920.1 CDS Metme_0983 NC_015572.1 1060553 1060945 D PFAM: FeS cluster biogenesis; manually curated; TIGRFAM: FeS cluster insertion; KEGG: lch:Lcho_3448 iron-sulfur cluster assembly accessory protein; HAMAP: Iron--sulfur cluster insertion protein erpA; Iron--sulfur cluster insertion protein erpA 1060553..1060945 Methylomonas methanica MC09 10670981 YP_004511921.1 CDS Metme_0984 NC_015572.1 1060999 1061778 R KEGG: tbd:Tbd_2145 hypothetical protein; hypothetical protein complement(1060999..1061778) Methylomonas methanica MC09 10670982 YP_004511922.1 CDS Metme_0985 NC_015572.1 1062075 1063559 D PFAM: Protein of unknown function DUF2235; KEGG: geo:Geob_3189 hypothetical protein; hypothetical protein 1062075..1063559 Methylomonas methanica MC09 10670983 YP_004511923.1 CDS Metme_0986 NC_015572.1 1063661 1064632 R KEGG: cja:CJA_2169 hypothetical protein; hypothetical protein complement(1063661..1064632) Methylomonas methanica MC09 10670984 YP_004511924.1 CDS Metme_0987 NC_015572.1 1064654 1065826 R KEGG: slt:Slit_2427 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer complement(1064654..1065826) Methylomonas methanica MC09 10670985 YP_004511925.1 CDS Metme_0988 NC_015572.1 1066142 1066744 R KEGG: ppg:PputGB1_1920 arylesterase; PFAM: Lipase, GDSL; arylesterase complement(1066142..1066744) Methylomonas methanica MC09 10670986 YP_004511926.1 CDS Metme_0989 NC_015572.1 1066746 1067435 D PFAM: ABC transporter-like; KEGG: ppu:PP_2317 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 1066746..1067435 Methylomonas methanica MC09 10670987 YP_004511927.1 CDS Metme_0990 NC_015572.1 1067432 1069915 D PFAM: Protein of unknown function DUF214, permase predicted; KEGG: pfl:PFL_4280 permease; hypothetical protein 1067432..1069915 Methylomonas methanica MC09 10670988 YP_004511928.1 CDS Metme_0991 NC_015572.1 1070104 1071420 D KEGG: afr:AFE_2597 sigma-54 dependent transcriptional regulator, PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; Fis family transcriptional regulator 1070104..1071420 Methylomonas methanica MC09 10670989 YP_004511929.1 CDS Metme_0992 NC_015572.1 1071429 1072352 D KEGG: gpb:HDN1F_28460 hypothetical protein; TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD; signal transduction protein 1071429..1072352 Methylomonas methanica MC09 10670990 YP_004511930.1 CDS Metme_0993 NC_015572.1 1072415 1073881 D KEGG: azl:AZL_014340 hypothetical protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; serine/threonine protein kinase 1072415..1073881 Methylomonas methanica MC09 10670991 YP_004511931.1 CDS Metme_0994 NC_015572.1 1073925 1074488 D KEGG: str:Sterm_1210 hypothetical protein; hypothetical protein 1073925..1074488 Methylomonas methanica MC09 10670992 YP_004511932.1 CDS Metme_0995 NC_015572.1 1074492 1075898 D KEGG: rca:Rcas_0223 FHA domain-containing protein; PFAM: Forkhead-associated; von Willebrand factor, type A; SMART: Forkhead-associated; von Willebrand factor, type A; forkhead-associated protein 1074492..1075898 Methylomonas methanica MC09 10670993 YP_004511933.1 CDS Metme_0996 NC_015572.1 1075898 1076728 D KEGG: bbe:BBR47_44770 hypothetical protein; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related; Ser/Thr phosphatase 1075898..1076728 Methylomonas methanica MC09 10670994 YP_004511934.1 CDS Metme_0997 NC_015572.1 1076885 1078423 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; KEGG: cps:CPS_3258 sensory box protein; SMART: Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase 1076885..1078423 Methylomonas methanica MC09 10670995 YP_004511935.1 CDS Metme_0998 NC_015572.1 1078435 1078761 R PFAM: Nitrogen regulatory protein PII; KEGG: mca:MCA0977 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(1078435..1078761) Methylomonas methanica MC09 10670996 YP_004511936.1 CDS Metme_0999 NC_015572.1 1078770 1081838 R KEGG: mca:MCA0978 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump complement(1078770..1081838) Methylomonas methanica MC09 10670997 YP_004511937.1 CDS Metme_1000 NC_015572.1 1081860 1083023 R KEGG: nmu:Nmul_A1640 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1081860..1083023) Methylomonas methanica MC09 10670998 YP_004511938.1 CDS Metme_1001 NC_015572.1 1083068 1084414 R PFAM: Outer membrane efflux protein; KEGG: nmu:Nmul_A1641 outer membrane efflux protein; outer membrane efflux protein complement(1083068..1084414) Methylomonas methanica MC09 10670999 YP_004511939.1 CDS Metme_1002 NC_015572.1 1084763 1085689 R KEGG: mfa:Mfla_1164 hypothetical protein; hypothetical protein complement(1084763..1085689) Methylomonas methanica MC09 10671000 YP_004511940.1 CDS Metme_1003 NC_015572.1 1086317 1086658 R PFAM: Protein of unknown function DUF45; KEGG: paa:Paes_0312 protein of unknown function DUF45; hypothetical protein complement(1086317..1086658) Methylomonas methanica MC09 10671001 YP_004511941.1 CDS Metme_1005 NC_015572.1 1087106 1087963 R PFAM: Uncharacterised conserved protein UCP021525; KEGG: cph:Cpha266_0283 hypothetical protein; hypothetical protein complement(1087106..1087963) Methylomonas methanica MC09 10671003 YP_004511942.1 CDS Metme_1006 NC_015572.1 1087926 1088942 R PFAM: Protein of unknown function DUF2186; KEGG: cph:Cpha266_0284 hypothetical protein; hypothetical protein complement(1087926..1088942) Methylomonas methanica MC09 10671004 YP_004511943.1 CDS Metme_1007 NC_015572.1 1089211 1089960 R KEGG: gca:Galf_2409 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein complement(1089211..1089960) Methylomonas methanica MC09 10671005 YP_004511944.1 CDS Metme_1008 NC_015572.1 1089950 1091509 R PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region; integrase catalytic subunit complement(1089950..1091509) Methylomonas methanica MC09 10671006 YP_004511945.1 CDS Metme_1009 NC_015572.1 1092080 1093201 D PFAM: Integrase, catalytic core, phage; KEGG: integrase; integrase 1092080..1093201 Methylomonas methanica MC09 10671007 YP_004511946.1 CDS Metme_1010 NC_015572.1 1093194 1093874 D hypothetical protein 1093194..1093874 Methylomonas methanica MC09 10671008 YP_004511947.1 CDS Metme_1011 NC_015572.1 1093986 1094291 D KEGG: gbm:Gbem_4137 hypothetical protein; hypothetical protein 1093986..1094291 Methylomonas methanica MC09 10671009 YP_004511948.1 CDS Metme_1012 NC_015572.1 1094292 1094546 D KEGG: hypothetical protein; hypothetical protein 1094292..1094546 Methylomonas methanica MC09 10671010 YP_004511949.1 CDS Metme_1013 NC_015572.1 1094548 1096668 D KEGG: bte:BTH_I3137 hypothetical protein; hypothetical protein 1094548..1096668 Methylomonas methanica MC09 10671011 YP_004511950.1 CDS Metme_1014 NC_015572.1 1096832 1097239 D KEGG: nhl:Nhal_2265 hypothetical protein; hypothetical protein 1096832..1097239 Methylomonas methanica MC09 10671012 YP_004511951.1 CDS Metme_1015 NC_015572.1 1097236 1097721 D hypothetical protein 1097236..1097721 Methylomonas methanica MC09 10671013 YP_004511952.1 CDS Metme_1016 NC_015572.1 1097773 1098072 D hypothetical protein 1097773..1098072 Methylomonas methanica MC09 10671014 YP_004511953.1 CDS Metme_1017 NC_015572.1 1098282 1098647 D hypothetical protein 1098282..1098647 Methylomonas methanica MC09 10671015 YP_004511954.1 CDS Metme_1018 NC_015572.1 1098888 1100252 R KEGG: eba:p1B277 transposase; transposase complement(1098888..1100252) Methylomonas methanica MC09 10671016 YP_004511955.1 CDS Metme_1019 NC_015572.1 1100394 1100717 D hypothetical protein 1100394..1100717 Methylomonas methanica MC09 10671017 YP_004511956.1 CDS Metme_1020 NC_015572.1 1101029 1101811 R PFAM: Type IV pilus assembly PilZ; KEGG: tgr:Tgr7_1211 glycosyltransferase-like protein; type IV pilus assembly PilZ complement(1101029..1101811) Methylomonas methanica MC09 10671019 YP_004511957.1 CDS Metme_1021 NC_015572.1 1101846 1102340 R PFAM: FlgN; KEGG: har:HEAR1904 flagella synthesis protein FlgN; FlgN family protein complement(1101846..1102340) Methylomonas methanica MC09 10671020 YP_004511958.1 CDS Metme_1022 NC_015572.1 1102345 1102656 R TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM; flagellar biosynthesis anti-sigma factor protein FlgM complement(1102345..1102656) Methylomonas methanica MC09 10671021 YP_004511959.1 CDS Metme_1023 NC_015572.1 1102726 1103418 R KEGG: nwa:Nwat_0433 flagella basal body P-ring formation protein FlgA; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain; flagellar basal body P-ring biosynthesis protein FlgA complement(1102726..1103418) Methylomonas methanica MC09 10671022 YP_004511960.1 CDS Metme_1024 NC_015572.1 1103540 1104466 D KEGG: sse:Ssed_3089 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region; response regulator receiver modulated CheW protein 1103540..1104466 Methylomonas methanica MC09 10671023 YP_004511961.1 CDS Metme_1025 NC_015572.1 1104583 1104783 D hypothetical protein 1104583..1104783 Methylomonas methanica MC09 10671024 YP_004511962.1 CDS Metme_1026 NC_015572.1 1104843 1105235 D KEGG: tgr:Tgr7_1217 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgB 1104843..1105235 Methylomonas methanica MC09 10671025 YP_004511963.1 CDS Metme_1027 NC_015572.1 1105238 1105654 D KEGG: pat:Patl_3099 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar basal body rod protein FlgC 1105238..1105654 Methylomonas methanica MC09 10671026 YP_004511964.1 CDS Metme_1028 NC_015572.1 1105664 1106344 D PFAM: Flagellar hook capping protein; KEGG: nhl:Nhal_2326 flagellar hook capping protein; flagellar hook capping protein 1105664..1106344 Methylomonas methanica MC09 10671027 YP_004511965.1 CDS Metme_1029 NC_015572.1 1106358 1107641 D KEGG: xal:XALc_1425 flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; flagellar hook-basal body protein 1106358..1107641 Methylomonas methanica MC09 10671028 YP_004511966.1 CDS Metme_1030 NC_015572.1 1107657 1108406 D KEGG: hch:HCH_04478 flagellar basal body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; flagellar basal body rod protein FlgF 1107657..1108406 Methylomonas methanica MC09 10671029 YP_004511967.1 CDS Metme_1031 NC_015572.1 1108457 1109245 D KEGG: nwa:Nwat_2219 flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgG 1108457..1109245 Methylomonas methanica MC09 10671030 YP_004511968.1 CDS Metme_1032 NC_015572.1 1109262 1109930 D KEGG: nhl:Nhal_2330 flagellar L-ring protein; HAMAP: Flagellar L-ring protein; PFAM: Flagellar L-ring protein; Flagellar L-ring protein 1109262..1109930 Methylomonas methanica MC09 10671031 YP_004511969.1 CDS Metme_1033 NC_015572.1 1109964 1111064 D KEGG: nwa:Nwat_2217 flagellar P-ring protein; HAMAP: Flagellar P-ring protein; PFAM: Flagellar P-ring protein; flagellar P-ring protein 1109964..1111064 Methylomonas methanica MC09 10671032 YP_004511970.1 CDS Metme_1034 NC_015572.1 1111149 1112180 D TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal; KEGG: swd:Swoo_1605 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ 1111149..1112180 Methylomonas methanica MC09 10671033 YP_004511971.1 CDS Metme_1035 NC_015572.1 1112190 1113851 D KEGG: csa:Csal_1969 flagellar hook-associated protein; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar hook-associated protein FlgK 1112190..1113851 Methylomonas methanica MC09 10671034 YP_004511972.1 CDS Metme_1036 NC_015572.1 1113863 1114777 D KEGG: net:Neut_0345 flagellar hook-associated protein FlgL; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; flagellar hook-associated protein 3 1113863..1114777 Methylomonas methanica MC09 10671035 YP_004511973.1 CDS Metme_1037 NC_015572.1 1114802 1115476 D KEGG: nmr:Nmar_1252 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1114802..1115476 Methylomonas methanica MC09 10671036 YP_004511974.1 CDS Metme_1038 NC_015572.1 1115473 1115982 D KEGG: nhl:Nhal_1117 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX; 2'-5' RNA ligase 1115473..1115982 Methylomonas methanica MC09 10671037 YP_004511975.1 CDS Metme_1039 NC_015572.1 1116154 1116609 R hypothetical protein complement(1116154..1116609) Methylomonas methanica MC09 10671038 YP_004511976.1 CDS Metme_1040 NC_015572.1 1116708 1116992 R hypothetical protein complement(1116708..1116992) Methylomonas methanica MC09 10671039 YP_004511977.1 CDS Metme_1041 NC_015572.1 1117108 1117311 D KEGG: bpy:Bphyt_0267 hypothetical protein; hypothetical protein 1117108..1117311 Methylomonas methanica MC09 10671040 YP_004511978.1 CDS Metme_1042 NC_015572.1 1117322 1117918 D hypothetical protein 1117322..1117918 Methylomonas methanica MC09 10671041 YP_004511979.1 CDS Metme_1043 NC_015572.1 1117919 1118152 D hypothetical protein 1117919..1118152 Methylomonas methanica MC09 10671042 YP_004511980.1 CDS Metme_1044 NC_015572.1 1118152 1118298 D hypothetical protein 1118152..1118298 Methylomonas methanica MC09 10671043 YP_004511981.1 CDS Metme_1045 NC_015572.1 1118428 1118685 D hypothetical protein 1118428..1118685 Methylomonas methanica MC09 10671044 YP_004511982.1 CDS Metme_1046 NC_015572.1 1119232 1119681 D hypothetical protein 1119232..1119681 Methylomonas methanica MC09 10671045 YP_004511983.1 CDS Metme_1047 NC_015572.1 1119685 1119999 D hypothetical protein 1119685..1119999 Methylomonas methanica MC09 10671046 YP_004511984.1 CDS Metme_1048 NC_015572.1 1120049 1120285 D KEGG: rpf:Rpic12D_4470 hypothetical protein; hypothetical protein 1120049..1120285 Methylomonas methanica MC09 10671047 YP_004511985.1 CDS Metme_1049 NC_015572.1 1120372 1120566 D hypothetical protein 1120372..1120566 Methylomonas methanica MC09 10671048 YP_004511986.1 CDS Metme_1050 NC_015572.1 1120628 1122115 D KEGG: rpf:Rpic12D_4471 hypothetical protein; hypothetical protein 1120628..1122115 Methylomonas methanica MC09 10671049 YP_004511987.1 CDS Metme_1051 NC_015572.1 1122125 1122493 D hypothetical protein 1122125..1122493 Methylomonas methanica MC09 10671050 YP_004511988.1 CDS Metme_1052 NC_015572.1 1122493 1123707 D PFAM: Zonular occludens toxin; KEGG: rpf:Rpic12D_4473 zonular occludens toxin; Zonular occludens toxin 1122493..1123707 Methylomonas methanica MC09 10671051 YP_004511989.1 CDS Metme_1054 NC_015572.1 1124947 1126062 D PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 1124947..1126062 Methylomonas methanica MC09 10671053 YP_004511990.1 CDS Metme_1056 NC_015572.1 1127161 1128344 R KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(join(1127161..1128081,1128081..1128344)) Methylomonas methanica MC09 10671055 YP_004511991.1 CDS Metme_1057 NC_015572.1 1129019 1130011 R TIGRFAM: Lytic murein transglycosylase B; KEGG: avn:Avin_08410 lytic murein transglycosylase B; lytic murein transglycosylase B complement(1129019..1130011) Methylomonas methanica MC09 10671056 YP_004511992.1 CDS Metme_1058 NC_015572.1 1130021 1131151 R KEGG: mca:MCA0104 rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein; rod shape-determining protein RodA complement(1130021..1131151) Methylomonas methanica MC09 10671057 YP_004511993.1 CDS Metme_1059 NC_015572.1 1131141 1132997 R TIGRFAM: Penicillin-binding protein 2; KEGG: mca:MCA0103 penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; penicillin-binding protein 2 complement(1131141..1132997) Methylomonas methanica MC09 10671058 YP_004511994.1 CDS Metme_1060 NC_015572.1 1133002 1133490 R KEGG: mca:MCA0102 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD; rod shape-determining protein MreD complement(1133002..1133490) Methylomonas methanica MC09 10671059 YP_004511995.1 CDS Metme_1061 NC_015572.1 1133477 1134322 R KEGG: mca:MCA0101 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC complement(1133477..1134322) Methylomonas methanica MC09 10671060 YP_004511996.1 CDS Metme_1062 NC_015572.1 1134545 1135606 R KEGG: mca:MCA0100 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein complement(1134545..1135606) Methylomonas methanica MC09 10671061 YP_004511997.1 CDS Metme_1063 NC_015572.1 1135694 1135981 D KEGG: aeh:Mlg_0168 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; aspartyl/glutamyl-tRNA amidotransferase subunit C 1135694..1135981 Methylomonas methanica MC09 10671062 YP_004511998.1 CDS Metme_1064 NC_015572.1 1135990 1137441 D TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: nwa:Nwat_0481 glutamyl-tRNA(Gln) amidotransferase subunit A; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 1135990..1137441 Methylomonas methanica MC09 10671063 YP_004511999.1 CDS Metme_1065 NC_015572.1 1137481 1138920 D TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: tgr:Tgr7_0517 glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; aspartyl/glutamyl-tRNA amidotransferase subunit B 1137481..1138920 Methylomonas methanica MC09 10671064 YP_004512000.1 CDS Metme_1066 NC_015572.1 1139333 1139626 D hypothetical protein 1139333..1139626 Methylomonas methanica MC09 10671065 YP_004512001.1 CDS Metme_1067 NC_015572.1 1139581 1139910 D hypothetical protein 1139581..1139910 Methylomonas methanica MC09 10671066 YP_004512002.1 CDS Metme_1068 NC_015572.1 1139907 1140647 D KEGG: hypothetical protein; hypothetical protein 1139907..1140647 Methylomonas methanica MC09 10671067 YP_004512003.1 CDS Metme_1069 NC_015572.1 1141195 1141554 D KEGG: pca:Pcar_2899 hypothetical protein; hypothetical protein 1141195..1141554 Methylomonas methanica MC09 10671068 YP_004512004.1 CDS Metme_1070 NC_015572.1 1141632 1144031 R PFAM: Peptidase S16, lon C-terminal; KEGG: mca:MCA0853 ATP-dependent protease; peptidase S16 lon domain-containing protein complement(1141632..1144031) Methylomonas methanica MC09 10671069 YP_004512005.1 CDS Metme_1071 NC_015572.1 1144230 1144646 D KEGG: meh:M301_2701 hypothetical protein; hypothetical protein 1144230..1144646 Methylomonas methanica MC09 10671070 YP_004512006.1 CDS Metme_1072 NC_015572.1 1144890 1145717 R KEGG: hch:HCH_00502 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(1144890..1145717) Methylomonas methanica MC09 10671071 YP_004512007.1 CDS Metme_1073 NC_015572.1 1145944 1148802 R KEGG: dar:Daro_1943 TPR repeat-containing protein; TIGRFAM: PEP-CTERM system TPR-repeat lipoprotein, PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; PEP-CTERM system TPR-repeat lipoprotein complement(1145944..1148802) Methylomonas methanica MC09 10671072 YP_004512008.1 CDS Metme_1074 NC_015572.1 1148945 1151191 D SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative; KEGG: mca:MCA0821 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; DNA topoisomerase IV subunit A 1148945..1151191 Methylomonas methanica MC09 10671073 YP_004512009.1 CDS Metme_1075 NC_015572.1 1151356 1154175 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; PAS fold; KEGG: dar:Daro_1362 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1151356..1154175 Methylomonas methanica MC09 10671074 YP_004512010.1 CDS Metme_1076 NC_015572.1 1154286 1155257 D KEGG: tgr:Tgr7_1852 tRNA-dihydrouridine synthase A; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, YjbN; PFAM: tRNA-dihydrouridine synthase; hypothetical protein 1154286..1155257 Methylomonas methanica MC09 10671075 YP_004512011.1 CDS Metme_1077 NC_015572.1 1155297 1155842 D PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: mca:MCA1670 GTP cyclohydrolase I; GTP cyclohydrolase I 1155297..1155842 Methylomonas methanica MC09 10671076 YP_004512012.1 CDS Metme_1078 NC_015572.1 1155849 1156826 D PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: mca:MCA1671 ferrochelatase; ferrochelatase 1155849..1156826 Methylomonas methanica MC09 10671077 YP_004512013.1 CDS Metme_1079 NC_015572.1 1156855 1158450 D KEGG: nwa:Nwat_1539 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS domain-containing protein 1156855..1158450 Methylomonas methanica MC09 10671078 YP_004512014.1 CDS Metme_1080 NC_015572.1 1158447 1159652 D PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: mfa:Mfla_1255 phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 1158447..1159652 Methylomonas methanica MC09 10671079 YP_004512015.1 CDS Metme_1081 NC_015572.1 1159675 1160250 D PFAM: Lytic transglycosylase-like, catalytic; KEGG: mca:MCA2008 transglycosylase SLT domain-containing protein; lytic transglycosylase catalytic subunit 1159675..1160250 Methylomonas methanica MC09 10671080 YP_004512016.1 CDS Metme_1082 NC_015572.1 1160253 1161104 D PFAM: Metal-dependent hydrolase HDOD; KEGG: dde:Dde_2455 metal dependent phosphohydrolase; signal transduction protein 1160253..1161104 Methylomonas methanica MC09 10671081 YP_004512017.1 CDS Metme_1083 NC_015572.1 1161113 1161691 R TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: aha:AHA_2242 septum formation protein Maf; PFAM: Maf-like protein; Septum formation protein Maf complement(1161113..1161691) Methylomonas methanica MC09 10671082 YP_004512018.1 CDS Metme_1084 NC_015572.1 1161761 1162279 D PFAM: Protein of unknown function DUF177; KEGG: mca:MCA2006 hypothetical protein; hypothetical protein 1161761..1162279 Methylomonas methanica MC09 10671083 YP_004512019.1 CDS Metme_1085 NC_015572.1 1162282 1162467 D TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: ribosomal protein L32; PFAM: Ribosomal protein L32p; 50S ribosomal protein L32 1162282..1162467 Methylomonas methanica MC09 10671084 YP_004512020.1 CDS Metme_1086 NC_015572.1 1162669 1163697 D TIGRFAM: Phospholipid biosynthesis protein, PlsX like; HAMAP: Phospholipid biosynthesis protein, PlsX like; KEGG: mca:MCA2004 glycerol-3-phosphate acyltransferase PlsX; PFAM: Fatty acid synthesis plsX protein; phosphate acyltransferase 1162669..1163697 Methylomonas methanica MC09 10671085 YP_004512021.1 CDS Metme_1087 NC_015572.1 1163694 1164662 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: mca:MCA2003 3-oxoacyl-(acyl carrier protein) synthase III; 3-oxoacyl-ACP synthase 1163694..1164662 Methylomonas methanica MC09 10671086 YP_004512022.1 CDS Metme_1088 NC_015572.1 1164670 1165620 D TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: mca:MCA2002 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-ACP transacylase 1164670..1165620 Methylomonas methanica MC09 10671087 YP_004512023.1 CDS Metme_1089 NC_015572.1 1165613 1166341 D KEGG: vfm:VFMJ11_1867 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1165613..1166341 Methylomonas methanica MC09 10671088 YP_004512024.1 CDS Metme_1090 NC_015572.1 1166412 1167446 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: vex:VEA_000797 GGDEF family protein; SMART: Diguanylate cyclase, predicted; diguanylate cyclase complement(1166412..1167446) Methylomonas methanica MC09 10671089 YP_004512025.1 CDS Metme_1091 NC_015572.1 1167846 1170662 R TIGRFAM: Excinuclease ABC, A subunit; HAMAP: UvrABC system protein A; KEGG: mca:MCA2694 excinuclease ABC, A subunit; PFAM: ABC transporter-like; UvrABC system protein A complement(1167846..1170662) Methylomonas methanica MC09 10671091 YP_004512026.1 CDS Metme_1092 NC_015572.1 1170739 1172124 D PFAM: Major facilitator superfamily MFS-1; KEGG: nwa:Nwat_3080 major facilitator superfamily protein; major facilitator superfamily protein 1170739..1172124 Methylomonas methanica MC09 10671092 YP_004512027.1 CDS Metme_1093 NC_015572.1 1172161 1172622 D KEGG: nhl:Nhal_3825 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 1172161..1172622 Methylomonas methanica MC09 10671093 YP_004512028.1 CDS Metme_1094 NC_015572.1 1172716 1173342 R PFAM: Methyltransferase type 11; KEGG: pol:Bpro_1916 hypothetical protein; type 11 methyltransferase complement(1172716..1173342) Methylomonas methanica MC09 10671094 YP_004512029.1 CDS Metme_1095 NC_015572.1 1173355 1174242 R PFAM: Rhodanese-like; KEGG: mca:MCA1555 mercaptopyruvate sulfurtransferase; SMART: Rhodanese-like; 3-mercaptopyruvate sulfurtransferase complement(1173355..1174242) Methylomonas methanica MC09 10671095 YP_004512030.1 CDS Metme_1096 NC_015572.1 1174415 1174873 D PFAM: Protein of unknown function DUF2582; KEGG: hoh:Hoch_4960 ribonuclease R; hypothetical protein 1174415..1174873 Methylomonas methanica MC09 10671096 YP_004512031.1 CDS Metme_1097 NC_015572.1 1174951 1175094 R hypothetical protein complement(1174951..1175094) Methylomonas methanica MC09 10671097 YP_004512032.1 CDS Metme_1098 NC_015572.1 1175232 1175756 D KEGG: mca:MCA2972 lipoprotein A domain-containing protein; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; rare lipoprotein A 1175232..1175756 Methylomonas methanica MC09 10671098 YP_004512033.1 CDS Metme_1099 NC_015572.1 1175765 1176661 R KEGG: caa:Caka_0241 inositol monophosphatase; PFAM: Inositol monophosphatase; inositol-phosphate phosphatase complement(1175765..1176661) Methylomonas methanica MC09 10671099 YP_004512034.1 CDS Metme_1100 NC_015572.1 1176642 1177628 R KEGG: caa:Caka_0240 protein of unknown function DUF227; PFAM: Protein of unknown function DUF227; SMART: CHK kinase-like; hypothetical protein complement(1176642..1177628) Methylomonas methanica MC09 10671100 YP_004512035.1 CDS Metme_1101 NC_015572.1 1177652 1178269 R PFAM: Uncharacterised protein family UPF0227; KEGG: tgr:Tgr7_1294 protein of unknown function UPF0227; hypothetical protein complement(1177652..1178269) Methylomonas methanica MC09 10671101 YP_004512036.1 CDS Metme_1102 NC_015572.1 1178262 1179836 R TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: bba:Bd1278 carbon-nitrogen hydrolase: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(1178262..1179836) Methylomonas methanica MC09 10671102 YP_004512037.1 CDS Metme_1103 NC_015572.1 1180061 1181734 R PFAM: FAD dependent oxidoreductase; Monooxygenase, FAD-binding; KEGG: amr:AM1_6083 halogenase; FAD dependent oxidoreductase complement(1180061..1181734) Methylomonas methanica MC09 10671103 YP_004512038.1 CDS Metme_1104 NC_015572.1 1181837 1182733 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gca:Galf_1932 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(1181837..1182733) Methylomonas methanica MC09 10671104 YP_004512039.1 CDS Metme_1105 NC_015572.1 1182994 1183893 D PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: amr:AM1_2260 LysR family transcriptional regulator; LysR family transcriptional regulator 1182994..1183893 Methylomonas methanica MC09 10671105 YP_004512040.1 CDS Metme_1106 NC_015572.1 1184500 1185891 D PFAM: Ig; Prenyltransferase/squalene oxidase; KEGG: gur:Gura_3989 hypothetical protein; Ig family protein 1184500..1185891 Methylomonas methanica MC09 10671106 YP_004512041.1 CDS Metme_1107 NC_015572.1 1185919 1193373 D KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: Transglutaminase-like; YD repeat; RHS repeat-associated core domain-containing protein 1185919..1193373 Methylomonas methanica MC09 10671107 YP_004512042.1 CDS Metme_1108 NC_015572.1 1193635 1194048 D hypothetical protein 1193635..1194048 Methylomonas methanica MC09 10671108 YP_004512043.1 CDS Metme_1109 NC_015572.1 1194212 1194745 D PFAM: Exosortase EpsH-related; KEGG: srm:SRM_00719 conserved hypothetical protein, membrane; exosortase 1194212..1194745 Methylomonas methanica MC09 10671109 YP_004512044.1 CDS Metme_1110 NC_015572.1 1194732 1195343 D hypothetical protein 1194732..1195343 Methylomonas methanica MC09 10671110 YP_004512045.1 CDS Metme_1111 NC_015572.1 1195786 1196724 D KEGG: dre:100330267 nucleoporin 214kDa-like; TIGRFAM: variant PEP-CTERM exosortase signal; PFAM: PEP-CTERM bacterial; variant PEP-CTERM exosortase signal 1195786..1196724 Methylomonas methanica MC09 10671111 YP_004512046.1 CDS Metme_1112 NC_015572.1 1197112 1197984 R PFAM: ABC transporter-like; KEGG: noc:Noc_0581 ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; phosphate-transporting ATPase complement(1197112..1197984) Methylomonas methanica MC09 10671112 YP_004512047.1 CDS Metme_1113 NC_015572.1 1197981 1198817 R KEGG: nhl:Nhal_2979 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(1197981..1198817) Methylomonas methanica MC09 10671113 YP_004512048.1 CDS Metme_1114 NC_015572.1 1198810 1199688 R KEGG: nhl:Nhal_2980 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(1198810..1199688) Methylomonas methanica MC09 10671114 YP_004512049.1 CDS Metme_1115 NC_015572.1 1199645 1200502 R KEGG: nhl:Nhal_2981 phosphate binding protein; TIGRFAM: Phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1; phosphate binding protein complement(1199645..1200502) Methylomonas methanica MC09 10671115 YP_004512050.1 CDS Metme_1116 NC_015572.1 1200669 1205114 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: nhl:Nhal_1407 diguanylate cyclase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase complement(1200669..1205114) Methylomonas methanica MC09 10671116 YP_004512051.1 CDS Metme_1117 NC_015572.1 1205121 1206068 R KEGG: nwa:Nwat_1159 hypothetical protein; hypothetical protein complement(1205121..1206068) Methylomonas methanica MC09 10671117 YP_004512052.1 CDS Metme_1118 NC_015572.1 1206122 1208347 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: nwa:Nwat_1158 TonB-dependent receptor plug; TonB-dependent receptor plug complement(1206122..1208347) Methylomonas methanica MC09 10671118 YP_004512053.1 CDS Metme_1119 NC_015572.1 1208382 1209206 R KEGG: glo:Glov_1112 hypothetical protein; hypothetical protein complement(1208382..1209206) Methylomonas methanica MC09 10671119 YP_004512054.1 CDS Metme_1120 NC_015572.1 1209203 1210009 R KEGG: glo:Glov_1113 hypothetical protein; hypothetical protein complement(1209203..1210009) Methylomonas methanica MC09 10671120 YP_004512055.1 CDS Metme_1121 NC_015572.1 1210018 1210776 R KEGG: dze:Dd1591_2450 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(1210018..1210776) Methylomonas methanica MC09 10671121 YP_004512056.1 CDS Metme_1122 NC_015572.1 1210780 1212654 R KEGG: nhl:Nhal_1401 thiamine pyrophosphate protein TPP binding domain protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase complement(1210780..1212654) Methylomonas methanica MC09 10671122 YP_004512057.1 CDS Metme_1123 NC_015572.1 1212997 1213161 D hypothetical protein 1212997..1213161 Methylomonas methanica MC09 10671123 YP_004512058.1 CDS Metme_1124 NC_015572.1 1213182 1220162 D SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; Serine/threonine-protein kinase domain; PAS; PAC motif; Signal transduction response regulator, receiver region; TIGRFAM: PAS; KEGG: bpy:Bphyt_1683 PAS sensor protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; Serine/threonine-protein kinase-like domain; PAS fold; PAS fold-3; Signal transduction response regulator, receiver region; PAS sensor protein 1213182..1220162 Methylomonas methanica MC09 10671124 YP_004512059.1 CDS Metme_1125 NC_015572.1 1220324 1220524 R KEGG: azo:azo2858 hypothetical protein; hypothetical protein complement(1220324..1220524) Methylomonas methanica MC09 10671125 YP_004512060.1 CDS Metme_1126 NC_015572.1 1220526 1221113 R KEGG: tmz:Tmz1t_2737 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-24 related; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(1220526..1221113) Methylomonas methanica MC09 10671126 YP_004512061.1 CDS Metme_1127 NC_015572.1 1221128 1222171 R KEGG: sco:SCO3452 methyltransferase; PFAM: Methyltransferase type 11; arsenite methyltransferase complement(1221128..1222171) Methylomonas methanica MC09 10671127 YP_004512062.1 CDS Metme_1128 NC_015572.1 1222418 1223683 R PFAM: Protein of unknown function DUF2279, periplasmic lipoprotein; KEGG: neu:NE1833 hypothetical protein; hypothetical protein complement(1222418..1223683) Methylomonas methanica MC09 10671128 YP_004512063.1 CDS Metme_1129 NC_015572.1 1223687 1225180 R KEGG: mca:MCA2123 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(1223687..1225180) Methylomonas methanica MC09 10671129 YP_004512064.1 CDS Metme_1130 NC_015572.1 1225257 1226204 D PFAM: ABC transporter-like; KEGG: pmy:Pmen_1919 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 1225257..1226204 Methylomonas methanica MC09 10671130 YP_004512065.1 CDS Metme_1131 NC_015572.1 1226201 1226965 D PFAM: ABC-2 type transporter; KEGG: mca:MCA2121 ABC transporter, permease; ABC transporter 1226201..1226965 Methylomonas methanica MC09 10671131 YP_004512066.1 CDS Metme_1132 NC_015572.1 1227065 1227754 R KEGG: alv:Alvin_0882 hypothetical protein; hypothetical protein complement(1227065..1227754) Methylomonas methanica MC09 10671132 YP_004512067.1 CDS Metme_1133 NC_015572.1 1227772 1228326 R SMART: Protein-tyrosine phosphatase, catalytic; KEGG: alv:Alvin_0881 dual specificity protein phosphatase; protein-tyrosine-phosphatase complement(1227772..1228326) Methylomonas methanica MC09 10671133 YP_004512068.1 CDS Metme_1134 NC_015572.1 1228464 1229141 R PFAM: Ribose 5-phosphate isomerase; TIGRFAM: Ribose 5-phosphate isomerase; HAMAP: Ribose-5-phosphate isomerase, subgroup; KEGG: mca:MCA0355 ribose-5-phosphate isomerase A; ribose-5-phosphate isomerase A complement(1228464..1229141) Methylomonas methanica MC09 10671134 YP_004512069.1 CDS Metme_1135 NC_015572.1 1229321 1230844 D KEGG: mca:MCA0354 threonine dehydratase; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; threonine dehydratase 1229321..1230844 Methylomonas methanica MC09 10671135 YP_004512070.1 CDS Metme_1136 NC_015572.1 1231208 1232182 D KEGG: eba:ebA2989 hypothetical protein; hypothetical protein 1231208..1232182 Methylomonas methanica MC09 10671136 YP_004512071.1 CDS Metme_1137 NC_015572.1 1232179 1233879 D TIGRFAM: PAS; PFAM: PAS fold-3; HAMP linker domain; PAS fold; KEGG: eba:ebA2987 two component sensor; SMART: PAC motif; PAS; PAS sensor protein 1232179..1233879 Methylomonas methanica MC09 10671137 YP_004512072.1 CDS Metme_1138 NC_015572.1 1233866 1236871 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold-3; KEGG: multi-sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; multi-sensor signal transduction histidine kinase 1233866..1236871 Methylomonas methanica MC09 10671138 YP_004512073.1 CDS Metme_1139 NC_015572.1 1236943 1237368 D KEGG: response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 1236943..1237368 Methylomonas methanica MC09 10671139 YP_004512074.1 CDS Metme_1140 NC_015572.1 1237449 1240823 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS fold-3; GAF; PAS fold; KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS; PAC motif; GAF; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1237449..1240823 Methylomonas methanica MC09 10671140 YP_004512075.1 CDS Metme_1141 NC_015572.1 1240976 1241434 R PFAM: Uncharacterised protein family UPF0310; KEGG: mca:MCA0353 hypothetical protein; hypothetical protein complement(1240976..1241434) Methylomonas methanica MC09 10671141 YP_004512076.1 CDS Metme_1142 NC_015572.1 1241514 1243739 R KEGG: dar:Daro_0966 type II secretion system protein E; PFAM: Type II secretion system protein E; Signal transduction response regulator, receiver region; General secretory system II, protein E, N-terminal; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein complement(1241514..1243739) Methylomonas methanica MC09 10671142 YP_004512077.1 CDS Metme_1143 NC_015572.1 1243743 1244978 R KEGG: dar:Daro_0967 sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; histidine kinase complement(1243743..1244978) Methylomonas methanica MC09 10671143 YP_004512078.1 CDS Metme_1144 NC_015572.1 1244983 1245645 R KEGG: rcu:RCOM_1788050 hypothetical protein; hypothetical protein complement(1244983..1245645) Methylomonas methanica MC09 10671144 YP_004512079.1 CDS Metme_1145 NC_015572.1 1245834 1247003 R KEGG: hch:HCH_04128 signal transduction protein; PFAM: Diguanylate phosphodiesterase, predicted; EAL C-terminal; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase complement(1245834..1247003) Methylomonas methanica MC09 10671145 YP_004512080.1 CDS Metme_1146 NC_015572.1 1247153 1248298 D PFAM: Protein of unknown function DUF900, hydrolase-like; KEGG: cyt:cce_2617 hypothetical protein; hypothetical protein 1247153..1248298 Methylomonas methanica MC09 10671146 YP_004512081.1 CDS Metme_1149 NC_015572.1 1249275 1250837 R PFAM: Transposase, IS66; KEGG: reu:Reut_C6183 transposase IS66; transposase IS66 complement(1249275..1250837) Methylomonas methanica MC09 10671149 YP_004512082.1 CDS Metme_1150 NC_015572.1 1250938 1251219 R PFAM: Transposase (), IS66 Orf2 like; KEGG: reu:Reut_C6378 IS66 Orf2 like; IS66 Orf2 family protein complement(1250938..1251219) Methylomonas methanica MC09 10671150 YP_004512083.1 CDS Metme_1153 NC_015572.1 1252198 1252698 D KEGG: pna:Pnap_1740 transposase; transposase 1252198..1252698 Methylomonas methanica MC09 10671152 YP_004512084.1 CDS Metme_1155 NC_015572.1 1254856 1255611 D KEGG: maq:Maqu_1225 IstB ATP binding domain-containing protein; PFAM: IstB-like ATP-binding protein; IstB-like ATP binding N-terminal; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 1254856..1255611 Methylomonas methanica MC09 10671154 YP_004512085.1 CDS Metme_1156 NC_015572.1 1255564 1255971 R PFAM: Transposase IS3/IS911; KEGG: pna:Pnap_2523 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1255564..1255971) Methylomonas methanica MC09 10671155 YP_004512086.1 CDS Metme_1158 NC_015572.1 1257424 1259199 D SMART: ATPase, AAA+ type, core; manually curated; KEGG: pph:Ppha_0523 ABC transporter related; PFAM: ABC transporter-like; xenobiotic-transporting ATPase 1257424..1259199 Methylomonas methanica MC09 10671157 YP_004512087.1 CDS Metme_1159 NC_015572.1 1259305 1261143 D KEGG: glo:Glov_3386 hypothetical protein; hypothetical protein 1259305..1261143 Methylomonas methanica MC09 10671158 YP_004512088.1 CDS Metme_1160 NC_015572.1 1261174 1262193 D KEGG: dfe:Dfer_3363 N-acylneuraminate-9-phosphate synthase; PFAM: N-acetylneuraminic acid synthase, N-terminal; SAF domain; N-acetylneuraminate synthase 1261174..1262193 Methylomonas methanica MC09 10671159 YP_004512089.1 CDS Metme_1161 NC_015572.1 1262186 1263343 D TIGRFAM: UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing; KEGG: rpb:RPB_1535 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetyl-D-glucosamine 2-epimerase 1262186..1263343 Methylomonas methanica MC09 10671160 YP_004512090.1 CDS Metme_1162 NC_015572.1 1263360 1264070 D KEGG: gka:GK3120 acylneuraminate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; N-acylneuraminate cytidylyltransferase 1263360..1264070 Methylomonas methanica MC09 10671161 YP_004512091.1 CDS Metme_1163 NC_015572.1 1264075 1265316 D TIGRFAM: N-acetyl sugar amidotransferase; KEGG: lpa:lpa_01155 LPS biosynthesis protein, PseA-like protein; N-acetyl sugar amidotransferase 1264075..1265316 Methylomonas methanica MC09 10671162 YP_004512092.1 CDS Metme_1164 NC_015572.1 1265339 1266067 D PFAM: Methyltransferase type 12; KEGG: cpi:Cpin_1269 methyltransferase type 12; type 12 methyltransferase 1265339..1266067 Methylomonas methanica MC09 10671163 YP_004512093.1 CDS Metme_1165 NC_015572.1 1266080 1267009 D PFAM: Methyltransferase type 11; KEGG: dfe:Dfer_3803 methyltransferase type 12; type 11 methyltransferase 1266080..1267009 Methylomonas methanica MC09 10671164 YP_004512094.1 CDS Metme_1166 NC_015572.1 1267010 1268875 D PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; manually curated; KEGG: nde:NIDE2868 asparagine synthase; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; asparagine synthase 1267010..1268875 Methylomonas methanica MC09 10671165 YP_004512095.1 CDS Metme_1167 NC_015572.1 1268872 1269042 D hypothetical protein 1268872..1269042 Methylomonas methanica MC09 10671166 YP_004512096.1 CDS Metme_1168 NC_015572.1 1269055 1270041 D PFAM: Methyltransferase type 12; KEGG: ter:Tery_1348 methyltransferase type 11; type 12 methyltransferase 1269055..1270041 Methylomonas methanica MC09 10671167 YP_004512097.1 CDS Metme_1169 NC_015572.1 1270110 1271810 D PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; KEGG: gfo:GFO_0573 asparagine synthetase [glutamine-hydrolyzing]; asparagine synthase 1270110..1271810 Methylomonas methanica MC09 10671168 YP_004512098.1 CDS Metme_1170 NC_015572.1 1271823 1272584 D KEGG: pph:Ppha_0531 histidine biosynthesis protein; manually curated; PFAM: Histidine biosynthesis; histidine biosynthesis protein 1271823..1272584 Methylomonas methanica MC09 10671169 YP_004512099.1 CDS Metme_1171 NC_015572.1 1272584 1273219 D TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: lpa:lpa_01157 glutamine amidotransferase; PFAM: Glutamine amidotransferase class-I, C-terminal; imidazole glycerol phosphate synthase subunit HisH 1272584..1273219 Methylomonas methanica MC09 10671170 YP_004512100.1 CDS Metme_1172 NC_015572.1 1273260 1274813 D PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: tmz:Tmz1t_3262 membrane bound O-acyl transferase MBOAT family protein; membrane bound O-acyl transferase MBOAT family protein 1273260..1274813 Methylomonas methanica MC09 10671171 YP_004512101.1 CDS Metme_1173 NC_015572.1 1274817 1275914 D KEGG: cno:NT01CX_1555 hypothetical protein; hypothetical protein 1274817..1275914 Methylomonas methanica MC09 10671172 YP_004512102.1 CDS Metme_1174 NC_015572.1 1275959 1277374 D PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: dfe:Dfer_1037 membrane bound O-acyl transferase MBOAT family protein; membrane bound O-acyl transferase MBOAT family protein 1275959..1277374 Methylomonas methanica MC09 10671173 YP_004512103.1 CDS Metme_1175 NC_015572.1 1277377 1278246 D KEGG: dfe:Dfer_1038 hypothetical protein; hypothetical protein 1277377..1278246 Methylomonas methanica MC09 10671174 YP_004512104.1 CDS Metme_1176 NC_015572.1 1278372 1279562 D KEGG: glo:Glov_3385 radical SAM domain protein; radical SAM domain-containing protein 1278372..1279562 Methylomonas methanica MC09 10671175 YP_004512105.1 CDS Metme_1177 NC_015572.1 1279620 1281998 D PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; KEGG: aha:AHA_4154 hypothetical protein; pyruvate phosphate dikinase PEP/pyruvate-binding protein 1279620..1281998 Methylomonas methanica MC09 10671176 YP_004512106.1 CDS Metme_1178 NC_015572.1 1282011 1282538 D KEGG: wsu:WS2182 adenylylsulfate kinase; manually curated; PFAM: Adenylylsulphate kinase, C-terminal; adenylylsulfate kinase 1282011..1282538 Methylomonas methanica MC09 10671177 YP_004512107.1 CDS Metme_1179 NC_015572.1 1282535 1283752 D KEGG: hje:HacjB3_06700 hypothetical protein; hypothetical protein 1282535..1283752 Methylomonas methanica MC09 10671178 YP_004512108.1 CDS Metme_1180 NC_015572.1 1283825 1284616 D PFAM: Methyltransferase type 11; KEGG: fal:FRAAL2062 3-demethylubiquinone-9 3-O-methyltransferase; type 11 methyltransferase 1283825..1284616 Methylomonas methanica MC09 10671179 YP_004512109.1 CDS Metme_1181 NC_015572.1 1284580 1285263 D PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: pfo:Pfl01_5513 glutamine amidotransferase class-I; glutamine amidotransferase 1284580..1285263 Methylomonas methanica MC09 10671180 YP_004512110.1 CDS Metme_1182 NC_015572.1 1285250 1286038 D PFAM: Nucleotidyl transferase; KEGG: hha:Hhal_0773 nucleotidyl transferase; nucleotidyl transferase 1285250..1286038 Methylomonas methanica MC09 10671181 YP_004512111.1 CDS Metme_1183 NC_015572.1 1286053 1286847 D KEGG: mpi:Mpet_0778 CDP-alcohol phosphatidyltransferase; hypothetical protein 1286053..1286847 Methylomonas methanica MC09 10671182 YP_004512112.1 CDS Metme_1184 NC_015572.1 1286871 1287935 D KEGG: gur:Gura_2346 lipopolysaccharide biosynthesis protein-like protein; lipopolysaccharide biosynthesis protein-like protein 1286871..1287935 Methylomonas methanica MC09 10671183 YP_004512113.1 CDS Metme_1185 NC_015572.1 1287932 1288363 D KEGG: gbm:Gbem_2571 hypothetical protein; hypothetical protein 1287932..1288363 Methylomonas methanica MC09 10671184 YP_004512114.1 CDS Metme_1186 NC_015572.1 1288384 1289139 D PFAM: Methyltransferase type 11; KEGG: glo:Glov_3377 methyltransferase type 11; type 11 methyltransferase 1288384..1289139 Methylomonas methanica MC09 10671185 YP_004512115.1 CDS Metme_1187 NC_015572.1 1289143 1290261 D KEGG: gbm:Gbem_2570 aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase 1289143..1290261 Methylomonas methanica MC09 10671186 YP_004512116.1 CDS Metme_1188 NC_015572.1 1290261 1291433 D KEGG: glo:Glov_3376 glycosyl transferase 2; family 2 glycosyl transferase 1290261..1291433 Methylomonas methanica MC09 10671187 YP_004512117.1 CDS Metme_1189 NC_015572.1 1291414 1292145 D TIGRFAM: Methyltransferase FkbM; KEGG: mtb:TBMG_02463 hypothetical protein; FkbM family methyltransferase 1291414..1292145 Methylomonas methanica MC09 10671188 YP_004512118.1 CDS Metme_1190 NC_015572.1 1292441 1293301 D PFAM: Glycosyl transferase, family 2; KEGG: sli:Slin_4932 glycosyl transferase 2; family 2 glycosyl transferase 1292441..1293301 Methylomonas methanica MC09 10671189 YP_004512119.1 CDS Metme_1191 NC_015572.1 1293327 1293929 D KEGG: vsp:VS_0225 lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; lipopolysaccharide biosynthesis O-acetyl transferase WbbJ 1293327..1293929 Methylomonas methanica MC09 10671190 YP_004512120.1 CDS Metme_1192 NC_015572.1 1293914 1295038 D PFAM: Glycosyl transferase, group 1; KEGG: rfr:Rfer_1259 glycosyl transferase, group 1; group 1 glycosyl transferase 1293914..1295038 Methylomonas methanica MC09 10671191 YP_004512121.1 CDS Metme_1193 NC_015572.1 1295035 1295781 D PFAM: Glycosyl transferase, family 2; KEGG: net:Neut_0179 glycosyl transferase; family 2 glycosyl transferase 1295035..1295781 Methylomonas methanica MC09 10671192 YP_004512122.1 CDS Metme_1194 NC_015572.1 1295800 1297071 D PFAM: Polysaccharide biosynthesis protein; KEGG: meh:M301_1234 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1295800..1297071 Methylomonas methanica MC09 10671193 YP_004512123.1 CDS Metme_1195 NC_015572.1 1297068 1298093 D KEGG: aci:ACIAD0083 polysaccharide polymerase; hypothetical protein 1297068..1298093 Methylomonas methanica MC09 10671194 YP_004512124.1 CDS Metme_1196 NC_015572.1 1298189 1299151 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: nhl:Nhal_3621 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1298189..1299151 Methylomonas methanica MC09 10671195 YP_004512125.1 CDS Metme_1197 NC_015572.1 1299154 1300185 D PFAM: Glycosyl transferase, family 4, conserved region; KEGG: pst:PSPTO_1755 glycosyl transferase, group 4 family protein; glycosyl transferase family protein 1299154..1300185 Methylomonas methanica MC09 10671196 YP_004512126.1 CDS Metme_1198 NC_015572.1 1300182 1302011 D PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: mca:MCA0903 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 1300182..1302011 Methylomonas methanica MC09 10671197 YP_004512127.1 CDS Metme_1199 NC_015572.1 1302131 1302622 R hypothetical protein complement(1302131..1302622) Methylomonas methanica MC09 10671198 YP_004512128.1 CDS Metme_1200 NC_015572.1 1302624 1303244 R hypothetical protein complement(1302624..1303244) Methylomonas methanica MC09 10671199 YP_004512129.1 CDS Metme_1201 NC_015572.1 1303241 1305004 R KEGG: cja:CJA_2434 von Willebrand factor type A domain protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A complement(1303241..1305004) Methylomonas methanica MC09 10671200 YP_004512130.1 CDS Metme_1202 NC_015572.1 1305289 1306251 D PFAM: Polysaccharide deacetylase; KEGG: noc:Noc_1967 polysaccharide deacetylase; polysaccharide deacetylase 1305289..1306251 Methylomonas methanica MC09 10671201 YP_004512131.1 CDS Metme_1203 NC_015572.1 1306303 1307274 D PFAM: Sulfotransferase; KEGG: hha:Hhal_1563 sulfotransferase; sulfotransferase 1306303..1307274 Methylomonas methanica MC09 10671202 YP_004512132.1 CDS Metme_1204 NC_015572.1 1307275 1308525 D KEGG: tbd:Tbd_0297 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03097, O-antigen ligase-related; PFAM: O-antigen ligase-related; wzy family polymerase, exosortase system type 1 associated 1307275..1308525 Methylomonas methanica MC09 10671203 YP_004512133.1 CDS Metme_1205 NC_015572.1 1308631 1310061 D PFAM: Polysaccharide biosynthesis protein; KEGG: nwa:Nwat_1744 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1308631..1310061 Methylomonas methanica MC09 10671204 YP_004512134.1 CDS Metme_1206 NC_015572.1 1310072 1310848 D KEGG: pca:Pcar_0625 hypothetical protein; hypothetical protein 1310072..1310848 Methylomonas methanica MC09 10671205 YP_004512135.1 CDS Metme_1207 NC_015572.1 1310962 1312047 D PFAM: Acyltransferase 3; KEGG: chu:CHU_0886 acyltransferase; acyltransferase 1310962..1312047 Methylomonas methanica MC09 10671206 YP_004512136.1 CDS Metme_1208 NC_015572.1 1312044 1313228 D PFAM: Glycosyl transferase, family 2; KEGG: hba:Hbal_2148 glycosyl transferase 2; family 2 glycosyl transferase 1312044..1313228 Methylomonas methanica MC09 10671207 YP_004512137.1 CDS Metme_1209 NC_015572.1 1313225 1314166 D PFAM: Glycosyl transferase, family 2; KEGG: mei:Msip34_1830 glycosyl transferase 2; family 2 glycosyl transferase 1313225..1314166 Methylomonas methanica MC09 10671208 YP_004512138.1 CDS Metme_1210 NC_015572.1 1314171 1315220 D PFAM: Glycosyl transferase, group 1; KEGG: azo:azo3262 glycosyltransferase; group 1 glycosyl transferase 1314171..1315220 Methylomonas methanica MC09 10671209 YP_004512139.1 CDS Metme_1211 NC_015572.1 1315183 1315773 R KEGG: neu:NE2159 TPR repeat-containing protein; hypothetical protein complement(1315183..1315773) Methylomonas methanica MC09 10671210 YP_004512140.1 CDS Metme_1212 NC_015572.1 1315862 1316572 D KEGG: nhl:Nhal_3217 hypothetical protein; hypothetical protein 1315862..1316572 Methylomonas methanica MC09 10671211 YP_004512141.1 CDS Metme_1213 NC_015572.1 1316590 1316847 D KEGG: nwa:Nwat_1758 hypothetical protein; hypothetical protein 1316590..1316847 Methylomonas methanica MC09 10671212 YP_004512142.1 CDS Metme_1214 NC_015572.1 1316877 1317692 D TIGRFAM: Hydrolase, ortholog 2, exosortase system type 1 associated; KEGG: nwa:Nwat_1757 exosortase system type 1 associated; hydrolase 1316877..1317692 Methylomonas methanica MC09 10671213 YP_004512143.1 CDS Metme_1215 NC_015572.1 1318108 1318971 D TIGRFAM: Hydrolase, ortholog 1, exosortase system type 1 associated; KEGG: nhl:Nhal_2163 hydrolase, exosortase system type 1 associated; hydrolase 1318108..1318971 Methylomonas methanica MC09 10671214 YP_004512144.1 CDS Metme_1216 NC_015572.1 1318976 1320328 D PFAM: Glycosyl transferase, family 2; GtrA-like protein; KEGG: dak:DaAHT2_0384 glycosyl transferase 2; family 2 glycosyl transferase 1318976..1320328 Methylomonas methanica MC09 10671215 YP_004512145.1 CDS Metme_1217 NC_015572.1 1320539 1322416 D KEGG: hypothetical protein; hypothetical protein 1320539..1322416 Methylomonas methanica MC09 10671216 YP_004512146.1 CDS Metme_1218 NC_015572.1 1322450 1323700 D KEGG: noc:Noc_1958 hypothetical protein; hypothetical protein 1322450..1323700 Methylomonas methanica MC09 10671217 YP_004512147.1 CDS Metme_1219 NC_015572.1 1323697 1324932 R TIGRFAM: Pyridoxal-dependent decarboxylase, exosortase system type 1 associated; KEGG: dar:Daro_2435 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2; pyridoxal-dependent decarboxylase, exosortase system type 1 associated complement(1323697..1324932) Methylomonas methanica MC09 10671218 YP_004512148.1 CDS Metme_1220 NC_015572.1 1324941 1326608 R TIGRFAM: Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; KEGG: noc:Noc_1956 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; acyl-CoA ligase complement(1324941..1326608) Methylomonas methanica MC09 10671219 YP_004512149.1 CDS Metme_1221 NC_015572.1 1326644 1328140 D KEGG: nmu:Nmul_A2521 hypothetical protein; TIGRFAM: Exosortase 1; Exosortase, EpsH; Methanolan biosynthesis EpsI; PFAM: Exosortase EpsH-related; exosortase 1326644..1328140 Methylomonas methanica MC09 10671220 YP_004512150.1 CDS Metme_1222 NC_015572.1 1328210 1329610 D TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: amc:MADE_00967 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal; mannose-1-phosphate guanylyltransferase 1328210..1329610 Methylomonas methanica MC09 10671221 YP_004512151.1 CDS Metme_1223 NC_015572.1 1329704 1330978 D KEGG: mag:amb1094 Mg2+ and Co2+ transporters; Mg/Co/Ni transporter MgtE; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 1329704..1330978 Methylomonas methanica MC09 10671222 YP_004512152.1 CDS Metme_1224 NC_015572.1 1331056 1331505 D KEGG: mca:MCA0993 Rrf2 family protein; TIGRFAM: SUF system FeS cluster assembly, Rtf2-type regulator; Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2; BadM/Rrf2 family transcriptional regulator 1331056..1331505 Methylomonas methanica MC09 10671223 YP_004512153.1 CDS Metme_1225 NC_015572.1 1331522 1332970 D KEGG: mca:MCA0992 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufB 1331522..1332970 Methylomonas methanica MC09 10671224 YP_004512154.1 CDS Metme_1226 NC_015572.1 1333426 1334382 D hypothetical protein 1333426..1334382 Methylomonas methanica MC09 10671225 YP_004512155.1 CDS Metme_1227 NC_015572.1 1334997 1335746 D TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: mca:MCA0991 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core; FeS assembly ATPase SufC 1334997..1335746 Methylomonas methanica MC09 10671226 YP_004512156.1 CDS Metme_1228 NC_015572.1 1335746 1337047 D KEGG: mca:MCA0990 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufD 1335746..1337047 Methylomonas methanica MC09 10671227 YP_004512157.1 CDS Metme_1229 NC_015572.1 1337042 1337602 R PFAM: Protein of unknown function DUF820; KEGG: nhl:Nhal_2835 protein of unknown function DUF820; hypothetical protein complement(1337042..1337602) Methylomonas methanica MC09 10671228 YP_004512158.1 CDS Metme_1230 NC_015572.1 1337678 1338901 D TIGRFAM: Cysteine desulfurase, SufS; KEGG: mca:MCA0989 selenocysteine lyase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SufS subfamily cysteine desulfurase 1337678..1338901 Methylomonas methanica MC09 10671229 YP_004512159.1 CDS Metme_1231 NC_015572.1 1338901 1339353 D KEGG: reh:H16_B1516 iron sulfur cluster assembly protein (SufU); TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; NifU family SUF system FeS assembly protein 1338901..1339353 Methylomonas methanica MC09 10671230 YP_004512160.1 CDS Metme_1232 NC_015572.1 1339359 1340018 D KEGG: cts:Ctha_1195 hypothetical protein; hypothetical protein 1339359..1340018 Methylomonas methanica MC09 10671231 YP_004512161.1 CDS Metme_1233 NC_015572.1 1340028 1340774 D KEGG: tgr:Tgr7_1199 hypothetical protein; HAMAP: Protein of unknown function DUF548; PFAM: Protein of unknown function DUF548; hypothetical protein 1340028..1340774 Methylomonas methanica MC09 10671232 YP_004512162.1 CDS Metme_1234 NC_015572.1 1340809 1341135 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mca:MCA0987 Rieske 2Fe-2S family protein; Rieske (2Fe-2S) domain-containing protein 1340809..1341135 Methylomonas methanica MC09 10671233 YP_004512163.1 CDS Metme_1235 NC_015572.1 1341163 1341810 D KEGG: gdj:Gdia_2373 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 1341163..1341810 Methylomonas methanica MC09 10671234 YP_004512164.1 CDS Metme_1236 NC_015572.1 1341833 1343422 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: tkm:TK90_1591 cobyrinic acid ac-diamide synthase; Cobyrinic acid ac-diamide synthase complement(1341833..1343422) Methylomonas methanica MC09 10671235 YP_004512165.1 CDS Metme_1237 NC_015572.1 1343572 1344111 D PFAM: Flavoprotein; KEGG: gbe:GbCGDNIH1_0764 flavoprotein; flavoprotein 1343572..1344111 Methylomonas methanica MC09 10671236 YP_004512166.1 CDS Metme_1238 NC_015572.1 1344108 1345526 D PFAM: Dihydropteroate synthase, DHPS; KEGG: mca:MCA1245 pterin-binding domain-containing protein; dihydropteroate synthase DHPS 1344108..1345526 Methylomonas methanica MC09 10671237 YP_004512167.1 CDS Metme_1239 NC_015572.1 1345578 1346930 R KEGG: rva:Rvan_2618 hypothetical protein; hypothetical protein complement(1345578..1346930) Methylomonas methanica MC09 10671238 YP_004512168.1 CDS Metme_1240 NC_015572.1 1347059 1348402 R TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; KEGG: cja:CJA_2105 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; exodeoxyribonuclease 7 large subunit complement(1347059..1348402) Methylomonas methanica MC09 10671239 YP_004512169.1 CDS Metme_1241 NC_015572.1 1348406 1348822 R PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: lch:Lcho_3803 protein of unknown function DUF395 YeeE/YedE; hypothetical protein complement(1348406..1348822) Methylomonas methanica MC09 10671240 YP_004512170.1 CDS Metme_1242 NC_015572.1 1348819 1349250 R PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: lpa:lpa_01093 predicted transporter component; hypothetical protein complement(1348819..1349250) Methylomonas methanica MC09 10671241 YP_004512171.1 CDS Metme_1243 NC_015572.1 1349402 1350373 D KEGG: ppr:PBPRA1007 cation efflux family protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 1349402..1350373 Methylomonas methanica MC09 10671242 YP_004512172.1 CDS Metme_1244 NC_015572.1 1350581 1350787 R KEGG: mca:MCA1389 formate dehydrogenase, delta subunit; formate dehydrogenase subunit delta complement(1350581..1350787) Methylomonas methanica MC09 10671243 YP_004512173.1 CDS Metme_1245 NC_015572.1 1350789 1351625 R TIGRFAM: Formate dehydrogenase, subunit FdhD; HAMAP: Protein fdhD; KEGG: mca:MCA1390 formate dehydrogenase accessory protein FdhD; PFAM: Formate dehydrogenase, subunit FdhD; Protein fdhD complement(1350789..1351625) Methylomonas methanica MC09 10671244 YP_004512174.1 CDS Metme_1246 NC_015572.1 1351640 1354492 R KEGG: mca:MCA1391 formate dehydrogenase, alpha subunit; TIGRFAM: Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha complement(1351640..1354492) Methylomonas methanica MC09 10671245 YP_004512175.1 CDS Metme_1247 NC_015572.1 1354514 1356061 R KEGG: mca:MCA1392 formate dehydrogenase, beta subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) complement(1354514..1356061) Methylomonas methanica MC09 10671246 YP_004512176.1 CDS Metme_1248 NC_015572.1 1356061 1356537 R PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: mca:MCA1393 formate dehydrogenase subunit gamma; NADH dehydrogenase (ubiquinone) 24 kDa subunit complement(1356061..1356537) Methylomonas methanica MC09 10671247 YP_004512177.1 CDS Metme_1249 NC_015572.1 1356768 1356956 D PFAM: BFD-like [2Fe-2S]-binding region; KEGG: scl:sce1647 bacterioferritin-associated ferredoxin; BFD (2Fe-2S)-binding domain-containing protein 1356768..1356956 Methylomonas methanica MC09 10671248 YP_004512178.1 CDS Metme_1250 NC_015572.1 1357040 1358059 R PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: mca:MCA1643 peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1357040..1358059) Methylomonas methanica MC09 10671249 YP_004512179.1 CDS Metme_1251 NC_015572.1 1358063 1358335 R PFAM: BolA-like protein; KEGG: mca:MCA1644 BolA protein; BolA family protein complement(1358063..1358335) Methylomonas methanica MC09 10671250 YP_004512180.1 CDS Metme_1252 NC_015572.1 1358332 1358634 R PFAM: YCII-related; KEGG: ttu:TERTU_2475 protein YciI; hypothetical protein complement(1358332..1358634) Methylomonas methanica MC09 10671251 YP_004512181.1 CDS Metme_1253 NC_015572.1 1358634 1359176 R TIGRFAM: Intracellular septation protein A; HAMAP: Intracellular septation protein A; KEGG: intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein complement(1358634..1359176) Methylomonas methanica MC09 10671252 YP_004512182.1 CDS Metme_1254 NC_015572.1 1359210 1359536 R hypothetical protein complement(1359210..1359536) Methylomonas methanica MC09 10671253 YP_004512183.1 CDS Metme_1255 NC_015572.1 1359648 1359950 D PFAM: Protein of unknown function DUF1244; KEGG: sde:Sde_2363 deoxycytidine triphosphate deaminase; hypothetical protein 1359648..1359950 Methylomonas methanica MC09 10671254 YP_004512184.1 CDS Metme_1256 NC_015572.1 1359947 1360678 D PFAM: Methyltransferase type 11; KEGG: mca:MCA1384 UbiE/COQ5 family methlytransferase; type 11 methyltransferase 1359947..1360678 Methylomonas methanica MC09 10671255 YP_004512185.1 CDS Metme_1257 NC_015572.1 1360734 1362473 D PFAM: Sporulation/cell division region, bacteria; KEGG: psm:PSM_A2142 hypothetical protein; sporulation domain-containing protein 1360734..1362473 Methylomonas methanica MC09 10671256 YP_004512186.1 CDS Metme_1258 NC_015572.1 1362672 1362878 D hypothetical protein 1362672..1362878 Methylomonas methanica MC09 10671257 YP_004512187.1 CDS Metme_1260 NC_015572.1 1363304 1364386 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(1363304..1364386) Methylomonas methanica MC09 10671258 YP_004512188.1 CDS Metme_1261 NC_015572.1 1364383 1364883 R PFAM: Transposase IS3/IS911; KEGG: pna:Pnap_1740 transposase; transposase IS3/IS911 family protein complement(1364383..1364883) Methylomonas methanica MC09 10671259 YP_004512189.1 CDS Metme_1262 NC_015572.1 1365636 1370036 D KEGG: see:SNSL254_p_0173 rhs family protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: YD repeat; RHS repeat-associated core domain-containing protein 1365636..1370036 Methylomonas methanica MC09 10671260 YP_004512190.1 CDS Metme_1263 NC_015572.1 1370041 1370364 D KEGG: psb:Psyr_3729 hypothetical protein; hypothetical protein 1370041..1370364 Methylomonas methanica MC09 10671261 YP_004512191.1 CDS Metme_1265 NC_015572.1 1371405 1372703 D PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: aca:ACP_3214 group II intron-encoded maturase; RNA-directed DNA polymerase 1371405..1372703 Methylomonas methanica MC09 10671263 YP_004512192.1 CDS Metme_1266 NC_015572.1 1373157 1374008 D KEGG: tbd:Tbd_1967 hypothetical protein; hypothetical protein 1373157..1374008 Methylomonas methanica MC09 10671264 YP_004512193.1 CDS Metme_1267 NC_015572.1 1374810 1375817 R KEGG: hch:HCH_04902 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucuronate 5'-epimerase complement(1374810..1375817) Methylomonas methanica MC09 10671265 YP_004512194.1 CDS Metme_1268 NC_015572.1 1375821 1377092 R KEGG: prw:PsycPRwf_0249 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase complement(1375821..1377092) Methylomonas methanica MC09 10671266 YP_004512195.1 CDS Metme_1269 NC_015572.1 1377136 1377753 R PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dps:DP1549 TetR transcription regulator; TetR family transcriptional regulator complement(1377136..1377753) Methylomonas methanica MC09 10671267 YP_004512196.1 CDS Metme_1270 NC_015572.1 1377821 1378381 R TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: mca:MCA1682 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase complement(1377821..1378381) Methylomonas methanica MC09 10671268 YP_004512197.1 CDS Metme_1271 NC_015572.1 1378371 1380212 R SMART: Excinuclease ABC, C subunit, N-terminal; TIGRFAM: Excinuclease ABC, C subunit; KEGG: mca:MCA1681 excinuclease ABC, C subunit; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; UvrABC system protein C complement(1378371..1380212) Methylomonas methanica MC09 10671269 YP_004512198.1 CDS Metme_1272 NC_015572.1 1380218 1380856 R PFAM: Uracil-DNA glycosylase-like; KEGG: tgr:Tgr7_1908 hypothetical protein; uracil-DNA glycosylase complement(1380218..1380856) Methylomonas methanica MC09 10671270 YP_004512199.1 CDS Metme_1273 NC_015572.1 1380994 1381482 R KEGG: caa:Caka_2751 hypothetical protein; hypothetical protein complement(1380994..1381482) Methylomonas methanica MC09 10671271 YP_004512200.1 CDS Metme_1274 NC_015572.1 1381485 1382804 R KEGG: nhl:Nhal_3163 hypothetical protein; hypothetical protein complement(1381485..1382804) Methylomonas methanica MC09 10671272 YP_004512201.1 CDS Metme_1275 NC_015572.1 1382816 1383472 R PFAM: PspA/IM30; KEGG: nhl:Nhal_3164 PspA/IM30 family protein; PspA/IM30 family protein complement(1382816..1383472) Methylomonas methanica MC09 10671273 YP_004512202.1 CDS Metme_1276 NC_015572.1 1383675 1385132 D KEGG: ppd:Ppro_3363 sigma-54 factor interaction domain-containing protein; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core; sigma-54 specific transcriptional regulator 1383675..1385132 Methylomonas methanica MC09 10671274 YP_004512203.1 CDS Metme_1277 NC_015572.1 1385365 1386261 D KEGG: mes:Meso_3536 ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome o ubiquinol oxidase subunit II; PFAM: COX aromatic rich; Cytochrome c oxidase subunit II C-terminal; ubiquinol oxidase subunit II 1385365..1386261 Methylomonas methanica MC09 10671275 YP_004512204.1 CDS Metme_1278 NC_015572.1 1386273 1388288 D KEGG: mes:Meso_3535 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome o ubiquinol oxidase, subunit I; PFAM: Cytochrome c oxidase, subunit I; cytochrome o ubiquinol oxidase subunit I 1386273..1388288 Methylomonas methanica MC09 10671276 YP_004512205.1 CDS Metme_1279 NC_015572.1 1388248 1388883 D KEGG: bmr:BMI_I47 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: Cytochrome o ubiquinol oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III; cytochrome o ubiquinol oxidase subunit III 1388248..1388883 Methylomonas methanica MC09 10671277 YP_004512206.1 CDS Metme_1280 NC_015572.1 1388884 1389258 D PFAM: Cytochrome C oxidase subunit IV prokaryotic; KEGG: gbe:GbCGDNIH1_1273 cytochrome o ubiquinol oxidase CyoD; cytochrome C oxidase subunit IV 1388884..1389258 Methylomonas methanica MC09 10671278 YP_004512207.1 CDS Metme_1281 NC_015572.1 1389268 1389726 R KEGG: dre:567029 ribosome binding protein 1 homolog (dog); hypothetical protein complement(1389268..1389726) Methylomonas methanica MC09 10671279 YP_004512208.1 CDS Metme_1282 NC_015572.1 1390457 1391539 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(1390457..1391539) Methylomonas methanica MC09 10671280 YP_004512209.1 CDS Metme_1283 NC_015572.1 1391536 1392036 R KEGG: pna:Pnap_1740 transposase; transposase complement(1391536..1392036) Methylomonas methanica MC09 10671281 YP_004512210.1 CDS Metme_1284 NC_015572.1 1392362 1392481 D hypothetical protein 1392362..1392481 Methylomonas methanica MC09 10671282 YP_004512211.1 CDS Metme_1285 NC_015572.1 1393084 1393584 D PFAM: Transposase IS3/IS911; KEGG: pna:Pnap_1740 transposase; transposase IS3/IS911 family protein 1393084..1393584 Methylomonas methanica MC09 10671283 YP_004512212.1 CDS Metme_1286 NC_015572.1 1393581 1394663 D PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit 1393581..1394663 Methylomonas methanica MC09 10671284 YP_004512213.1 CDS Metme_1287 NC_015572.1 1395076 1397154 R PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: mca:MCA1309 polynucleotide phosphorylase/polyadenylase; polyribonucleotide nucleotidyltransferase complement(1395076..1397154) Methylomonas methanica MC09 10671285 YP_004512214.1 CDS Metme_1288 NC_015572.1 1397243 1397512 R KEGG: mca:MCA1310 ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15; 30S ribosomal protein S15 complement(1397243..1397512) Methylomonas methanica MC09 10671286 YP_004512215.1 CDS Metme_1289 NC_015572.1 1397625 1398536 R TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: csa:Csal_3072 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type; tRNA pseudouridine synthase B complement(1397625..1398536) Methylomonas methanica MC09 10671287 YP_004512216.1 CDS Metme_1290 NC_015572.1 1398536 1398937 R TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: kva:Kvar_0522 ribosome-binding factor A; PFAM: Ribosome-binding factor A; Ribosome-binding factor A complement(1398536..1398937) Methylomonas methanica MC09 10671288 YP_004512217.1 CDS Metme_1291 NC_015572.1 1398941 1401622 R KEGG: mca:MCA1315 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Initiation factor 2 associated region, bacterial; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; translation initiation factor IF-2 complement(1398941..1401622) Methylomonas methanica MC09 10671289 YP_004512218.1 CDS Metme_1292 NC_015572.1 1401637 1403148 R KEGG: mca:MCA1316 transcription elongation factor NusA; TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain; NusA antitermination factor complement(1401637..1403148) Methylomonas methanica MC09 10671290 YP_004512219.1 CDS Metme_1293 NC_015572.1 1403138 1403680 R KEGG: maq:Maqu_3350 hypothetical protein; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090; Ribosome maturation factor rimP complement(1403138..1403680) Methylomonas methanica MC09 10671291 YP_004512220.1 CDS Metme_1294 NC_015572.1 1403990 1405192 R KEGG: jan:Jann_2672 hypothetical protein; hypothetical protein complement(1403990..1405192) Methylomonas methanica MC09 10671293 YP_004512221.1 CDS Metme_1295 NC_015572.1 1405193 1406290 R KEGG: jan:Jann_1850 hypothetical protein; hypothetical protein complement(1405193..1406290) Methylomonas methanica MC09 10671294 YP_004512222.1 CDS Metme_1296 NC_015572.1 1406307 1407473 R PFAM: Toxic anion resistance; KEGG: kvu:EIO_2126 tellurite resistance protein; toxic anion resistance family protein complement(1406307..1407473) Methylomonas methanica MC09 10671295 YP_004512223.1 CDS Metme_1297 NC_015572.1 1407507 1408364 R PFAM: 5-bromo-4-chloroindolyl phosphate hydrolysis protein; KEGG: sil:SPO2985 hypothetical protein; 5-bromo-4-chloroindolyl phosphate hydrolysis protein complement(1407507..1408364) Methylomonas methanica MC09 10671296 YP_004512224.1 CDS Metme_1298 NC_015572.1 1408771 1410741 R KEGG: pap:PSPA7_5564 chemotaxis transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer complement(1408771..1410741) Methylomonas methanica MC09 10671297 YP_004512225.1 CDS Metme_1299 NC_015572.1 1410886 1411041 D hypothetical protein 1410886..1411041 Methylomonas methanica MC09 10671298 YP_004512226.1 CDS Metme_1300 NC_015572.1 1411539 1412780 D KEGG: cja:CJA_0189 hypothetical protein; hypothetical protein 1411539..1412780 Methylomonas methanica MC09 10671299 YP_004512227.1 CDS Metme_1301 NC_015572.1 1412783 1413190 D KEGG: pat:Patl_2582 hypothetical protein; hypothetical protein 1412783..1413190 Methylomonas methanica MC09 10671300 YP_004512228.1 CDS Metme_1302 NC_015572.1 1413190 1414803 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; PAS fold-4; KEGG: cja:CJA_0187 GGDEF domain protein; SMART: Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase 1413190..1414803 Methylomonas methanica MC09 10671301 YP_004512229.1 CDS Metme_1303 NC_015572.1 1415003 1415896 R PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; KEGG: bge:BC1002_3225 methylene-tetrahydromethanopterin dehydrogenase; methylenetetrahydromethanopterin dehydrogenase complement(1415003..1415896) Methylomonas methanica MC09 10671302 YP_004512230.1 CDS Metme_1304 NC_015572.1 1416086 1416790 R KEGG: mca:MCA2120 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(1416086..1416790) Methylomonas methanica MC09 10671303 YP_004512231.1 CDS Metme_1305 NC_015572.1 1416794 1417828 R HAMAP: Fructose-1,6-bisphosphatase; KEGG: nhl:Nhal_0011 inositol phosphatase/fructose-16-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase class 1 complement(1416794..1417828) Methylomonas methanica MC09 10671304 YP_004512232.1 CDS Metme_1306 NC_015572.1 1417844 1418455 R PFAM: Nitroreductase-like; KEGG: dak:DaAHT2_0274 nitroreductase; nitroreductase complement(1417844..1418455) Methylomonas methanica MC09 10671305 YP_004512233.1 CDS Metme_1307 NC_015572.1 1418620 1419579 R KEGG: pct:PC1_1419 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1418620..1419579) Methylomonas methanica MC09 10671306 YP_004512234.1 CDS Metme_1308 NC_015572.1 1419922 1421700 D PFAM: TonB-dependent receptor, plug; KEGG: nmu:Nmul_A0973 TonB-dependent receptor; TonB-dependent receptor plug 1419922..1421700 Methylomonas methanica MC09 10671307 YP_004512235.1 CDS Metme_1309 NC_015572.1 1421782 1423005 D PFAM: Amidohydrolase 1; KEGG: neu:NE2343 hypothetical protein; amidohydrolase 1421782..1423005 Methylomonas methanica MC09 10671308 YP_004512236.1 CDS Metme_1310 NC_015572.1 1423034 1424524 R KEGG: mmw:Mmwyl1_3416 hypothetical protein; hypothetical protein complement(1423034..1424524) Methylomonas methanica MC09 10671309 YP_004512237.1 CDS Metme_1311 NC_015572.1 1424962 1425732 R KEGG: lbf:LBF_2938 cAMP-binding protein; hypothetical protein complement(1424962..1425732) Methylomonas methanica MC09 10671310 YP_004512238.1 CDS Metme_1312 NC_015572.1 1425923 1426999 D KEGG: dat:HRM2_20180 hypothetical protein; hypothetical protein 1425923..1426999 Methylomonas methanica MC09 10671311 YP_004512239.1 CDS Metme_1314 NC_015572.1 1427602 1428384 R TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(1427602..1428384) Methylomonas methanica MC09 10671313 YP_004512240.1 CDS Metme_1316 NC_015572.1 1430215 1431072 R PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: tkm:TK90_2502 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(1430215..1431072) Methylomonas methanica MC09 10671315 YP_004512241.1 CDS Metme_1317 NC_015572.1 1431669 1432418 D TIGRFAM: PEP-CTERM/exosortase system-associated acyltransferase; KEGG: nhl:Nhal_3259 hypothetical protein; PEP-CTERM/exosortase system-associated acyltransferase 1431669..1432418 Methylomonas methanica MC09 10671316 YP_004512242.1 CDS Metme_1319 NC_015572.1 1432912 1433994 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(1432912..1433994) Methylomonas methanica MC09 10671317 YP_004512243.1 CDS Metme_1320 NC_015572.1 1433991 1434491 R KEGG: pna:Pnap_1740 transposase; transposase complement(1433991..1434491) Methylomonas methanica MC09 10671318 YP_004512244.1 CDS Metme_1321 NC_015572.1 1436023 1436871 D KEGG: app:CAP2UW1_3277 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Sel1-like; SMART: Sel1-like; lytic transglycosylase catalytic subunit 1436023..1436871 Methylomonas methanica MC09 10671319 YP_004512245.1 CDS Metme_1322 NC_015572.1 1436886 1438259 R TIGRFAM: Signal transduction response regulator, PEP-CTERM system, PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; KEGG: tgr:Tgr7_2349 response regulator receiver protein; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator complement(1436886..1438259) Methylomonas methanica MC09 10671320 YP_004512246.1 CDS Metme_1323 NC_015572.1 1438246 1440330 R TIGRFAM: Signal transduction histidine kinase, PEP-CTERM system, PFAM: ATP-binding region, ATPase-like; KEGG: tkm:TK90_2497 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase complement(1438246..1440330) Methylomonas methanica MC09 10671321 YP_004512247.1 CDS Metme_1324 NC_015572.1 1440442 1440915 D KEGG: bta:519225 cyclic nucleotide gated channel beta 3; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; cyclic nucleotide-binding protein 1440442..1440915 Methylomonas methanica MC09 10671322 YP_004512248.1 CDS Metme_1325 NC_015572.1 1441028 1443442 D PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: ttu:TERTU_4325 tetratricopeptide repeat domain protein; hypothetical protein 1441028..1443442 Methylomonas methanica MC09 10671323 YP_004512249.1 CDS Metme_1326 NC_015572.1 1443493 1444209 D PFAM: Polysaccharide export protein; KEGG: tgr:Tgr7_2392 polysaccharide export protein; polysaccharide export protein 1443493..1444209 Methylomonas methanica MC09 10671324 YP_004512250.1 CDS Metme_1327 NC_015572.1 1444250 1445779 D KEGG: nhl:Nhal_3244 polysaccharide chain length determinant protein, PEP-Cterm locus subfamily; TIGRFAM: PEP-CTERM locus polysaccharide chain length determinant; PFAM: Lipopolysaccharide biosynthesis; polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 1444250..1445779 Methylomonas methanica MC09 10671325 YP_004512251.1 CDS Metme_1328 NC_015572.1 1445795 1446688 D KEGG: dar:Daro_2399 exopolysaccharide biosynthesis protein; exopolysaccharide biosynthesis protein 1445795..1446688 Methylomonas methanica MC09 10671326 YP_004512252.1 CDS Metme_1329 NC_015572.1 1446678 1448273 D TIGRFAM: PEP-CTERM, conserved hypothetical protein CHP03016; KEGG: tbd:Tbd_0284 hypothetical protein; PEP-CTERM system associated protein 1446678..1448273 Methylomonas methanica MC09 10671327 YP_004512253.1 CDS Metme_1330 NC_015572.1 1448291 1449316 D KEGG: noc:Noc_2016 ATPase; TIGRFAM: ATPase, secretion system, PEP-CTERM, predicted; SMART: ATPase, AAA+ type, core; secretion ATPase 1448291..1449316 Methylomonas methanica MC09 10671328 YP_004512254.1 CDS Metme_1331 NC_015572.1 1449297 1450448 D TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: aeh:Mlg_0109 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1449297..1450448 Methylomonas methanica MC09 10671329 YP_004512255.1 CDS Metme_1332 NC_015572.1 1450455 1451321 D KEGG: rru:Rru_A3114 polysaccharide deacetylase; TIGRFAM: PEP-CTERM locus, polysaccharide deactylase; PFAM: Polysaccharide deacetylase; polysaccharide deacetylase 1450455..1451321 Methylomonas methanica MC09 10671330 YP_004512256.1 CDS Metme_1333 NC_015572.1 1451318 1452337 D TIGRFAM: PEP-CTERM system-associated, FemAB-related; KEGG: noc:Noc_1980 hypothetical protein; FemAB-like protein 1451318..1452337 Methylomonas methanica MC09 10671331 YP_004512257.1 CDS Metme_1334 NC_015572.1 1452345 1453559 D KEGG: net:Neut_0898 glycosyl transferase, group 1; TIGRFAM: Sugar transferase, PEP-CTERM, Stp1; PFAM: Glycosyl transferase, group 1; sugar transferase 1452345..1453559 Methylomonas methanica MC09 10671332 YP_004512258.1 CDS Metme_1335 NC_015572.1 1453537 1454685 D KEGG: nhl:Nhal_3237 sugar transferase, PEP-Cterm/EpsH1 system associated; TIGRFAM: Sugar transferase, PEP-CTERM, Stp2; PFAM: Glycosyl transferase, group 1; sugar transferase 1453537..1454685 Methylomonas methanica MC09 10671333 YP_004512259.1 CDS Metme_1336 NC_015572.1 1454706 1456592 D TIGRFAM: Exosortase 1 system-associated amidotransferase 1; Asparagine synthase, glutamine-hydrolyzing; KEGG: nmu:Nmul_A2519 asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; exosortase 1454706..1456592 Methylomonas methanica MC09 10671334 YP_004512260.1 CDS Metme_1337 NC_015572.1 1456696 1457328 D hypothetical protein 1456696..1457328 Methylomonas methanica MC09 10671335 YP_004512261.1 CDS Metme_1338 NC_015572.1 1457379 1457642 D hypothetical protein 1457379..1457642 Methylomonas methanica MC09 10671336 YP_004512262.1 CDS Metme_1339 NC_015572.1 1457661 1458539 D KEGG: aeh:Mlg_0102 HPr kinase; HPr kinase 1457661..1458539 Methylomonas methanica MC09 10671337 YP_004512263.1 CDS Metme_1340 NC_015572.1 1458626 1459726 D KEGG: rfr:Rfer_0709 hypothetical protein; hypothetical protein 1458626..1459726 Methylomonas methanica MC09 10671338 YP_004512264.1 CDS Metme_1341 NC_015572.1 1459778 1460977 D PFAM: Glycosyl transferase, group 1; KEGG: neu:NE0794 glycosyl transferase group 1; group 1 glycosyl transferase 1459778..1460977 Methylomonas methanica MC09 10671339 YP_004512265.1 CDS Metme_1342 NC_015572.1 1461168 1462319 D PFAM: Glycosyl transferase, group 1; KEGG: rru:Rru_A3107 glycosyl transferase, group 1; group 1 glycosyl transferase 1461168..1462319 Methylomonas methanica MC09 10671340 YP_004512266.1 CDS Metme_1343 NC_015572.1 1462319 1463506 D PFAM: Glycosyl transferase, group 1; KEGG: rru:Rru_A3096 glycosyl transferase, group 1; group 1 glycosyl transferase 1462319..1463506 Methylomonas methanica MC09 10671341 YP_004512267.1 CDS Metme_1344 NC_015572.1 1463506 1465290 D PFAM: Asparagine synthase; KEGG: nhl:Nhal_3222 asparagine synthase (glutamine-hydrolyzing); asparagine synthase 1463506..1465290 Methylomonas methanica MC09 10671342 YP_004512268.1 CDS Metme_1345 NC_015572.1 1465311 1465736 R KEGG: mca:MCA1258 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00701; PFAM: Uncharacterised protein family UPF0093; hypothetical protein complement(1465311..1465736) Methylomonas methanica MC09 10671343 YP_004512269.1 CDS Metme_1346 NC_015572.1 1465905 1466606 D KEGG: nhl:Nhal_3343 hypothetical protein; hypothetical protein 1465905..1466606 Methylomonas methanica MC09 10671344 YP_004512270.1 CDS Metme_1347 NC_015572.1 1466603 1467784 D KEGG: nwa:Nwat_0121 hypothetical protein; hypothetical protein 1466603..1467784 Methylomonas methanica MC09 10671345 YP_004512271.1 CDS Metme_1348 NC_015572.1 1467800 1468339 D KEGG: noc:Noc_0133 ATP binding protein; TIGRFAM: Small GTP-binding protein; PFAM: Protein of unknown function, ATP binding; small GTP-binding protein 1467800..1468339 Methylomonas methanica MC09 10671346 YP_004512272.1 CDS Metme_1349 NC_015572.1 1468341 1469000 D KEGG: noc:Noc_0134 hypothetical protein; hypothetical protein 1468341..1469000 Methylomonas methanica MC09 10671347 YP_004512273.1 CDS Metme_1350 NC_015572.1 1469035 1469397 D PFAM: Dynein light chain-related; KEGG: nhl:Nhal_2891 roadblock/LC7 family protein; Roadblock/LC7 family protein 1469035..1469397 Methylomonas methanica MC09 10671348 YP_004512274.1 CDS Metme_1351 NC_015572.1 1469423 1469899 D KEGG: nhl:Nhal_2890 PAS sensor protein; TIGRFAM: PAS; PFAM: PAS fold-3; PAS sensor protein 1469423..1469899 Methylomonas methanica MC09 10671349 YP_004512275.1 CDS Metme_1352 NC_015572.1 1469912 1470658 D KEGG: nhl:Nhal_2889 ABC-type phosphate/phosphonate transport system periplasmic component; phosphate/phosphonate ABC transporter periplasmic protein 1469912..1470658 Methylomonas methanica MC09 10671350 YP_004512276.1 CDS Metme_1353 NC_015572.1 1470672 1471283 D PFAM: Phosphoglycerate mutase; KEGG: mca:MCA1249 alpha-ribazole-5`-phosphate phosphatase CobC; phosphoglycerate mutase 1470672..1471283 Methylomonas methanica MC09 10671351 YP_004512277.1 CDS Metme_1354 NC_015572.1 1471322 1474120 D KEGG: nhl:Nhal_3565 adenylate cyclase; PFAM: Adenylate cyclase, class-I; adenylate cyclase 1471322..1474120 Methylomonas methanica MC09 10671352 YP_004512278.1 CDS Metme_1355 NC_015572.1 1474177 1475208 D KEGG: cja:CJA_2880 hypothetical protein; hypothetical protein 1474177..1475208 Methylomonas methanica MC09 10671353 YP_004512279.1 CDS Metme_1356 NC_015572.1 1475255 1475611 D PFAM: Type IV pilus assembly PilZ; type IV pilus assembly PilZ 1475255..1475611 Methylomonas methanica MC09 10671354 YP_004512280.1 CDS Metme_1357 NC_015572.1 1475613 1475807 D KEGG: mca:MCA0181 hypothetical protein; hypothetical protein 1475613..1475807 Methylomonas methanica MC09 10671355 YP_004512281.1 CDS Metme_1358 NC_015572.1 1475832 1476083 R hypothetical protein complement(1475832..1476083) Methylomonas methanica MC09 10671356 YP_004512282.1 CDS Metme_1359 NC_015572.1 1476155 1476382 D hypothetical protein 1476155..1476382 Methylomonas methanica MC09 10671357 YP_004512283.1 CDS Metme_1360 NC_015572.1 1476366 1476638 D KEGG: kse:Ksed_24250 addiction module toxin, RelE/StbE family; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin 1476366..1476638 Methylomonas methanica MC09 10671358 YP_004512284.1 CDS Metme_1361 NC_015572.1 1476725 1477852 D PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: gka:GKP08 type IIs modification methyltransferase; D12 class N6 adenine-specific DNA methyltransferase 1476725..1477852 Methylomonas methanica MC09 10671359 YP_004512285.1 CDS Metme_1362 NC_015572.1 1477856 1478557 D KEGG: sfr:Sfri_3141 hypothetical protein; hypothetical protein 1477856..1478557 Methylomonas methanica MC09 10671360 YP_004512286.1 CDS Metme_1363 NC_015572.1 1478547 1479536 D manually curated; TIGRFAM: GHMP kinase group 1; KEGG: sfr:Sfri_3142 beta-ribofuranosylaminobenzene 5'-phosphate synthase; PFAM: GHMP kinase; beta-ribofuranosylaminobenzene 5'-phosphate synthase 1478547..1479536 Methylomonas methanica MC09 10671361 YP_004512287.1 CDS Metme_1364 NC_015572.1 1479529 1481073 D KEGG: sfr:Sfri_3143 hypothetical protein; hypothetical protein 1479529..1481073 Methylomonas methanica MC09 10671362 YP_004512288.1 CDS Metme_1365 NC_015572.1 1481517 1481924 R KEGG: ppr:PBPRA2809 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; hypothetical protein complement(1481517..1481924) Methylomonas methanica MC09 10671363 YP_004512289.1 CDS Metme_1366 NC_015572.1 1481921 1482271 R KEGG: nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(1481921..1482271) Methylomonas methanica MC09 10671364 YP_004512290.1 CDS Metme_1367 NC_015572.1 1482280 1483059 R PFAM: Protein of unknown function DUF1538; KEGG: vsp:VS_2276 hypothetical protein; hypothetical protein complement(1482280..1483059) Methylomonas methanica MC09 10671365 YP_004512291.1 CDS Metme_1368 NC_015572.1 1483056 1483787 R PFAM: Protein of unknown function DUF1538; KEGG: ttu:TERTU_3437 hypothetical protein; hypothetical protein complement(1483056..1483787) Methylomonas methanica MC09 10671366 YP_004512292.1 CDS Metme_1369 NC_015572.1 1483866 1485425 R PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; KEGG: msv:Mesil_2255 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(1483866..1485425) Methylomonas methanica MC09 10671367 YP_004512293.1 CDS Metme_1370 NC_015572.1 1485475 1486359 R KEGG: mca:MCA1862 carbon-nitrogen family hydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; N-carbamoylputrescine amidase complement(1485475..1486359) Methylomonas methanica MC09 10671368 YP_004512294.1 CDS Metme_1371 NC_015572.1 1486425 1487462 R KEGG: mca:MCA1861 hypothetical protein; PFAM: Peptidyl-arginine deiminase, Porphyromonas-type; Agmatine deiminase complement(1486425..1487462) Methylomonas methanica MC09 10671369 YP_004512295.1 CDS Metme_1372 NC_015572.1 1487753 1488667 D PFAM: Protein of unknown function DUF6, transmembrane; KEGG: neu:NE0381 integral membrane protein, DUF6; hypothetical protein 1487753..1488667 Methylomonas methanica MC09 10671370 YP_004512296.1 CDS Metme_1373 NC_015572.1 1488679 1490154 R PFAM: ATP-grasp fold, DUF201-type; KEGG: gpb:HDN1F_14170 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); ATP-grasp fold domain-containing protein complement(1488679..1490154) Methylomonas methanica MC09 10671371 YP_004512297.1 CDS Metme_1374 NC_015572.1 1490268 1491365 D KEGG: gpb:HDN1F_14160 hypothetical protein; hypothetical protein 1490268..1491365 Methylomonas methanica MC09 10671372 YP_004512298.1 CDS Metme_1375 NC_015572.1 1491362 1492471 D KEGG: mmw:Mmwyl1_1842 GCN5-like N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1491362..1492471 Methylomonas methanica MC09 10671373 YP_004512299.1 CDS Metme_1376 NC_015572.1 1492458 1493273 R KEGG: mca:MCA0060 general secretion pathway protein B; hypothetical protein complement(1492458..1493273) Methylomonas methanica MC09 10671374 YP_004512300.1 CDS Metme_1377 NC_015572.1 1493275 1494918 R KEGG: mca:MCA0061 general secretion pathway protein A; PFAM: Peptidoglycan binding-like; SMART: ATPase, AAA+ type, core; peptidoglycan-binding domain 1 protein complement(1493275..1494918) Methylomonas methanica MC09 10671375 YP_004512301.1 CDS Metme_1378 NC_015572.1 1495247 1495573 D KEGG: mca:MCA2809 hypothetical protein; hypothetical protein 1495247..1495573 Methylomonas methanica MC09 10671376 YP_004512302.1 CDS Metme_1379 NC_015572.1 1495817 1496116 R hypothetical protein complement(1495817..1496116) Methylomonas methanica MC09 10671377 YP_004512303.1 CDS Metme_1380 NC_015572.1 1496750 1498564 D KEGG: cti:RALTA_B1045 hybrid sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; integral membrane sensor hybrid histidine kinase 1496750..1498564 Methylomonas methanica MC09 10671378 YP_004512304.1 CDS Metme_1381 NC_015572.1 1498569 1499243 R KEGG: bge:BC1002_7111 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(1498569..1499243) Methylomonas methanica MC09 10671379 YP_004512305.1 CDS Metme_1382 NC_015572.1 1499546 1500202 D KEGG: bac:BamMC406_6781 hypothetical protein; hypothetical protein 1499546..1500202 Methylomonas methanica MC09 10671380 YP_004512306.1 CDS Metme_1383 NC_015572.1 1500669 1501178 D hypothetical protein 1500669..1501178 Methylomonas methanica MC09 10671381 YP_004512307.1 CDS Metme_1384 NC_015572.1 1501338 1503011 R KEGG: mca:MCA1860 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal; DNA repair protein RecN complement(1501338..1503011) Methylomonas methanica MC09 10671382 YP_004512308.1 CDS Metme_1385 NC_015572.1 1503024 1503899 R KEGG: mca:MCA1859 hypothetical protein; HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase; inorganic polyphosphate/ATP-NAD kinase complement(1503024..1503899) Methylomonas methanica MC09 10671383 YP_004512309.1 CDS Metme_1386 NC_015572.1 1503984 1505678 R KEGG: azl:AZL_d00810 glycoside hydrolase; glycoside hydrolase complement(1503984..1505678) Methylomonas methanica MC09 10671384 YP_004512310.1 CDS Metme_1387 NC_015572.1 1505755 1506525 R manually curated; PFAM: Protein of unknown function DUF815; KEGG: hch:HCH_05795 ATPase; SMART: ATPase, AAA+ type, core; hypothetical protein complement(1505755..1506525) Methylomonas methanica MC09 10671385 YP_004512311.1 CDS Metme_1388 NC_015572.1 1506688 1507830 D PFAM: Lytic transglycosylase-like, catalytic; KEGG: mca:MCA1826 hypothetical protein; lytic transglycosylase catalytic subunit 1506688..1507830 Methylomonas methanica MC09 10671386 YP_004512312.1 CDS Metme_1389 NC_015572.1 1507862 1508590 R KEGG: two component transcriptional regulator winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator complement(1507862..1508590) Methylomonas methanica MC09 10671387 YP_004512313.1 CDS Metme_1390 NC_015572.1 1508587 1510194 R KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; integral membrane sensor signal transduction histidine kinase complement(1508587..1510194) Methylomonas methanica MC09 10671388 YP_004512314.1 CDS Metme_1391 NC_015572.1 1510200 1510775 R KEGG: mca:MCA1714 surface protein-related protein; hypothetical protein complement(1510200..1510775) Methylomonas methanica MC09 10671389 YP_004512315.1 CDS Metme_1392 NC_015572.1 1510790 1512250 R KEGG: mca:MCA1715 sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; histidine kinase complement(1510790..1512250) Methylomonas methanica MC09 10671390 YP_004512316.1 CDS Metme_1393 NC_015572.1 1512517 1516161 D hypothetical protein 1512517..1516161 Methylomonas methanica MC09 10671391 YP_004512317.1 CDS Metme_1394 NC_015572.1 1516267 1516509 R hypothetical protein complement(1516267..1516509) Methylomonas methanica MC09 10671392 YP_004512318.1 CDS Metme_1395 NC_015572.1 1516982 1517956 D KEGG: sbn:Sbal195_3377 CRISPR-associated Cas1 family protein; TIGRFAM: CRISPR-associated protein Cas1, YPEST subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas1 1516982..1517956 Methylomonas methanica MC09 10671393 YP_004512319.1 CDS Metme_1396 NC_015572.1 1518010 1521324 D TIGRFAM: Helicase Cas3, CRISPR-associated, Yersinia-type; KEGG: abb:ABBFA_000982 CRISPR-associated helicase Cas3; CRISPR-associated helicase Cas3 family 1518010..1521324 Methylomonas methanica MC09 10671394 YP_004512320.1 CDS Metme_1397 NC_015572.1 1521653 1523068 D PFAM: CRISPR-associated protein Csy1; KEGG: abb:ABBFA_000983 hypothetical protein; CRISPR-associated protein Csy1 1521653..1523068 Methylomonas methanica MC09 10671395 YP_004512321.1 CDS Metme_1398 NC_015572.1 1523065 1523952 D KEGG: abb:ABBFA_000984 CRISPR-associated protein (Cas_Csy2) family protein; TIGRFAM: CRISPR-associated protein Csy2; PFAM: CRISPR-associated protein Csy2; CRISPR-associated protein, Csy2 family 1523065..1523952 Methylomonas methanica MC09 10671396 YP_004512322.1 CDS Metme_1399 NC_015572.1 1523966 1524982 D KEGG: abb:ABBFA_000985 CRISPR-associated protein (Cas_Csy3) family protein; TIGRFAM: CRISPR-associated protein Csy3; PFAM: CRISPR-associated protein Csy3; CRISPR-associated protein, Csy3 family 1523966..1524982 Methylomonas methanica MC09 10671397 YP_004512323.1 CDS Metme_1400 NC_015572.1 1524986 1525627 D KEGG: pin:Ping_1400 CRISPR-associated Csy4 family protein; TIGRFAM: CRISPR-associated protein Csy4; PFAM: CRISPR-associated protein Csy4; CRISPR-associated protein, Csy4 family 1524986..1525627 Methylomonas methanica MC09 10671398 YP_004512324.1 CDS Metme_1401 NC_015572.1 1530729 1530890 D hypothetical protein 1530729..1530890 Methylomonas methanica MC09 10671399 YP_004512325.1 CDS Metme_1402 NC_015572.1 1531271 1532692 D KEGG: tgr:Tgr7_2083 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; PFAM: Bacterial sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 1531271..1532692 Methylomonas methanica MC09 10671400 YP_004512326.1 CDS Metme_1403 NC_015572.1 1532703 1533803 D PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: neu:NE2279 polysaccharide export protein; polysaccharide export protein 1532703..1533803 Methylomonas methanica MC09 10671401 YP_004512327.1 CDS Metme_1404 NC_015572.1 1533857 1536232 D TIGRFAM: Exopolysaccharide synthesis protein; KEGG: neu:NE2280 chain length determinant protein; PFAM: Lipopolysaccharide biosynthesis; capsular exopolysaccharide family protein 1533857..1536232 Methylomonas methanica MC09 10671402 YP_004512328.1 CDS Metme_1405 NC_015572.1 1536235 1537485 D KEGG: syn:slr1074 hypothetical protein; hypothetical protein 1536235..1537485 Methylomonas methanica MC09 10671403 YP_004512329.1 CDS Metme_1406 NC_015572.1 1537496 1538833 D PFAM: Polysaccharide biosynthesis protein; KEGG: sth:STH2704 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1537496..1538833 Methylomonas methanica MC09 10671404 YP_004512330.1 CDS Metme_1407 NC_015572.1 1538847 1539794 D PFAM: Methyltransferase type 11; KEGG: gme:Gmet_0453 hypothetical protein; type 11 methyltransferase 1538847..1539794 Methylomonas methanica MC09 10671405 YP_004512331.1 CDS Metme_1408 NC_015572.1 1539838 1540629 D PFAM: Glycosyl transferase, family 2; KEGG: srm:SRM_00268 glycosyl transferase, family 2; family 2 glycosyl transferase 1539838..1540629 Methylomonas methanica MC09 10671406 YP_004512332.1 CDS Metme_1409 NC_015572.1 1540626 1541501 D PFAM: Glycosyl transferase, family 2; KEGG: gka:GK3313 glycosyltransferase; family 2 glycosyl transferase 1540626..1541501 Methylomonas methanica MC09 10671407 YP_004512333.1 CDS Metme_1410 NC_015572.1 1541613 1542815 D PFAM: Glycosyl transferase, group 1; KEGG: rva:Rvan_3115 glycosyl transferase group 1; group 1 glycosyl transferase 1541613..1542815 Methylomonas methanica MC09 10671408 YP_004512334.1 CDS Metme_1411 NC_015572.1 1542812 1543774 D PFAM: Glycosyl transferase, family 2; KEGG: afr:AFE_0082 O antigen biosynthesis rhamnosyltransferase; family 2 glycosyl transferase 1542812..1543774 Methylomonas methanica MC09 10671409 YP_004512335.1 CDS Metme_1412 NC_015572.1 1543826 1544623 R PFAM: Protein of unknown function DUF88; KEGG: rme:Rmet_3395 hypothetical protein; hypothetical protein complement(1543826..1544623) Methylomonas methanica MC09 10671410 YP_004512336.1 CDS Metme_1413 NC_015572.1 1544734 1545198 R KEGG: sfu:Sfum_2044 LysM domain/BON superfamily protein; PFAM: Peptidoglycan-binding lysin domain; Transport-associated; SMART: Peptidoglycan-binding Lysin subgroup; peptidoglycan-binding lysin domain-containing protein complement(1544734..1545198) Methylomonas methanica MC09 10671411 YP_004512337.1 CDS Metme_1414 NC_015572.1 1545256 1545792 R PFAM: Protein of unknown function DUF2302; KEGG: hba:Hbal_0306 hypothetical protein; hypothetical protein complement(1545256..1545792) Methylomonas methanica MC09 10671412 YP_004512338.1 CDS Metme_1415 NC_015572.1 1546169 1549627 R TIGRFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: psb:Psyr_0680 exodeoxyribonuclease V, RecC subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; exodeoxyribonuclease V subunit gamma complement(1546169..1549627) Methylomonas methanica MC09 10671413 YP_004512339.1 CDS Metme_1416 NC_015572.1 1549674 1550036 R hypothetical protein complement(1549674..1550036) Methylomonas methanica MC09 10671414 YP_004512340.1 CDS Metme_1417 NC_015572.1 1550215 1550787 R PFAM: AMMECR1; KEGG: mca:MCA0071 hypothetical protein; AMMECR1 domain-containing protein complement(1550215..1550787) Methylomonas methanica MC09 10671415 YP_004512341.1 CDS Metme_1418 NC_015572.1 1550899 1552287 R KEGG: gur:Gura_1394 ATP-dependent RNA helicase DbpA; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase complement(1550899..1552287) Methylomonas methanica MC09 10671416 YP_004512342.1 CDS Metme_1419 NC_015572.1 1552356 1553426 R KEGG: hch:HCH_03538 hypothetical protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(1552356..1553426) Methylomonas methanica MC09 10671417 YP_004512343.1 CDS Metme_1420 NC_015572.1 1553790 1556717 D PFAM: Haem peroxidase, animal; KEGG: neu:NE1238 oxygenase; heme peroxidase 1553790..1556717 Methylomonas methanica MC09 10671418 YP_004512344.1 CDS Metme_1421 NC_015572.1 1556748 1557701 D KEGG: lic:LIC10551 hypothetical protein; hypothetical protein 1556748..1557701 Methylomonas methanica MC09 10671419 YP_004512345.1 CDS Metme_1422 NC_015572.1 1557707 1558162 D KEGG: neu:NE1235 hypothetical protein; hypothetical protein 1557707..1558162 Methylomonas methanica MC09 10671420 YP_004512346.1 CDS Metme_1423 NC_015572.1 1558187 1559488 D KEGG: nmu:Nmul_A0529 hypothetical protein; hypothetical protein 1558187..1559488 Methylomonas methanica MC09 10671421 YP_004512347.1 CDS Metme_1424 NC_015572.1 1559504 1561027 D KEGG: nmu:Nmul_A0530 peroxidase; peroxidase 1559504..1561027 Methylomonas methanica MC09 10671422 YP_004512348.1 CDS Metme_1425 NC_015572.1 1561024 1562223 D KEGG: nmu:Nmul_A0531 hypothetical protein; hypothetical protein 1561024..1562223 Methylomonas methanica MC09 10671423 YP_004512349.1 CDS Metme_1426 NC_015572.1 1562621 1563804 D KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein join(1562621..1562884,1562884..1563804) Methylomonas methanica MC09 10671424 YP_004512350.1 CDS Metme_1427 NC_015572.1 1563779 1564198 R KEGG: hna:Hneap_1227 integrase catalytic region; integrase catalytic subunit complement(1563779..1564198) Methylomonas methanica MC09 10671425 YP_004512351.1 CDS Metme_1428 NC_015572.1 1564550 1565685 R KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(join(1564550..1565422,1565422..1565685)) Methylomonas methanica MC09 10671426 YP_004512352.1 CDS Metme_1429 NC_015572.1 1565748 1565963 R KEGG: pna:Pnap_1740 transposase; transposase complement(1565748..1565963) Methylomonas methanica MC09 10671427 YP_004512353.1 CDS Metme_1430 NC_015572.1 1566120 1567307 D hypothetical protein 1566120..1567307 Methylomonas methanica MC09 10671428 YP_004512354.1 CDS Metme_1431 NC_015572.1 1567609 1568220 R hypothetical protein complement(1567609..1568220) Methylomonas methanica MC09 10671429 YP_004512355.1 CDS Metme_1432 NC_015572.1 1568207 1568860 R KEGG: dac:Daci_1177 hypothetical protein; hypothetical protein complement(1568207..1568860) Methylomonas methanica MC09 10671430 YP_004512356.1 CDS Metme_1433 NC_015572.1 1568968 1569300 R hypothetical protein complement(1568968..1569300) Methylomonas methanica MC09 10671431 YP_004512357.1 CDS Metme_1434 NC_015572.1 1569430 1569723 R hypothetical protein complement(1569430..1569723) Methylomonas methanica MC09 10671432 YP_004512358.1 CDS Metme_1435 NC_015572.1 1569767 1574374 R KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: YD repeat; RHS repeat-associated core domain-containing protein complement(1569767..1574374) Methylomonas methanica MC09 10671433 YP_004512359.1 CDS Metme_1436 NC_015572.1 1574379 1577039 R PFAM: Transglutaminase-like; KEGG: ate:Athe_2571 transglutaminase domain-containing protein; transglutaminase domain-containing protein complement(1574379..1577039) Methylomonas methanica MC09 10671434 YP_004512360.1 CDS Metme_1437 NC_015572.1 1577052 1577744 R hypothetical protein complement(1577052..1577744) Methylomonas methanica MC09 10671435 YP_004512361.1 CDS Metme_1438 NC_015572.1 1577747 1578988 R KEGG: gme:Gmet_1475 YD repeat-containing protein; hypothetical protein complement(1577747..1578988) Methylomonas methanica MC09 10671436 YP_004512362.1 CDS Metme_1439 NC_015572.1 1579853 1580560 R PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dar:Daro_1455 dinitrogenase iron-molybdenum cofactor biosynthesis; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(1579853..1580560) Methylomonas methanica MC09 10671437 YP_004512363.1 CDS Metme_1440 NC_015572.1 1580557 1580877 R KEGG: afr:AFE_1502 ankyrin repeat protein/rhodanese-like domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein complement(1580557..1580877) Methylomonas methanica MC09 10671438 YP_004512364.1 CDS Metme_1441 NC_015572.1 1580899 1581468 R KEGG: ttu:TERTU_1535 hypothetical protein; hypothetical protein complement(1580899..1581468) Methylomonas methanica MC09 10671439 YP_004512365.1 CDS Metme_1442 NC_015572.1 1581496 1581777 R KEGG: mca:MCA2818 electron transport complex, H subunit; HAMAP: Protein rnfH; PFAM: Uncharacterised protein family UPF0125; Protein rnfH complement(1581496..1581777) Methylomonas methanica MC09 10671440 YP_004512366.1 CDS Metme_1443 NC_015572.1 1581790 1582503 R TIGRFAM: Electron transport complex, RnfE; HAMAP: Electron transport complex protein rnfE; KEGG: mca:MCA2819 electron transport complex RsxE subunit; PFAM: Electron transport complex, Rnf/Nqr; Electron transport complex protein rnfE complement(1581790..1582503) Methylomonas methanica MC09 10671441 YP_004512367.1 CDS Metme_1444 NC_015572.1 1582533 1583285 R KEGG: mca:MCA2820 electron transport complex, G subunit; TIGRFAM: Electron transport complex, RnfG; PFAM: FMN-binding; RnfABCDGE type electron transport complex subunit G complement(1582533..1583285) Methylomonas methanica MC09 10671442 YP_004512368.1 CDS Metme_1445 NC_015572.1 1583300 1584355 R TIGRFAM: Electron transport complex, RnfD; HAMAP: Electron transport complex protein rnfD; KEGG: mca:MCA2821 electron transport complex, D subunit; PFAM: NADH-quinone reductase NQR2/RnfD; Electron transport complex protein rnfD complement(1583300..1584355) Methylomonas methanica MC09 10671443 YP_004512369.1 CDS Metme_1446 NC_015572.1 1584352 1585908 R TIGRFAM: Electron transport complex, RnfC; HAMAP: Electron transport complex protein rnfC; KEGG: mca:MCA2822 electron transport complex, C subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; electron transport complex protein RnfC complement(1584352..1585908) Methylomonas methanica MC09 10671444 YP_004512370.1 CDS Metme_1447 NC_015572.1 1585922 1586455 R TIGRFAM: Electron transport complex, RnfB; HAMAP: Electron transport complex, RnfB, subgroup; KEGG: mca:MCA2823 electron transport complex, B subunit; PFAM: Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Electron transport complex protein rnfB complement(1585922..1586455) Methylomonas methanica MC09 10671445 YP_004512371.1 CDS Metme_1448 NC_015572.1 1586472 1586597 R hypothetical protein complement(1586472..1586597) Methylomonas methanica MC09 10671446 YP_004512372.1 CDS Metme_1449 NC_015572.1 1586594 1587175 R TIGRFAM: Electron transport complex, RnfA; HAMAP: Electron transport complex protein rnfA; KEGG: mca:MCA2824 electron transport complex, A subunit; PFAM: Electron transport complex, Rnf/Nqr; Electron transport complex protein rnfA complement(1586594..1587175) Methylomonas methanica MC09 10671447 YP_004512373.1 CDS Metme_1450 NC_015572.1 1587466 1589103 D TIGRFAM: Nitrogen fixation negative regulator NifL; PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; KEGG: mca:MCA0763 sensory box histidine kinase; SMART: ATP-binding region, ATPase-like; PAC motif; PAS; PAS/PAC sensor signal transduction histidine kinase 1587466..1589103 Methylomonas methanica MC09 10671448 YP_004512374.1 CDS Metme_1451 NC_015572.1 1589096 1590628 D TIGRFAM: Nif-specific regulatory protein; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; KEGG: mca:MCA0764 transcriptional regulator NifA; SMART: GAF; ATPase, AAA+ type, core; Fis family transcriptional regulator 1589096..1590628 Methylomonas methanica MC09 10671449 YP_004512375.1 CDS Metme_1452 NC_015572.1 1590726 1592459 D PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: scl:sce5603 malate dehydrogenase; malic protein NAD-binding protein 1590726..1592459 Methylomonas methanica MC09 10671450 YP_004512376.1 CDS Metme_1453 NC_015572.1 1592530 1593381 R KEGG: slt:Slit_0877 hypothetical protein; hypothetical protein complement(1592530..1593381) Methylomonas methanica MC09 10671451 YP_004512377.1 CDS Metme_1454 NC_015572.1 1593906 1595270 D KEGG: hel:HELO_3048 Mg++ transporter; TIGRFAM: Divalent cation transporter; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region; magnesium transporter 1593906..1595270 Methylomonas methanica MC09 10671452 YP_004512378.1 CDS Metme_1455 NC_015572.1 1595466 1595735 D hypothetical protein 1595466..1595735 Methylomonas methanica MC09 10671453 YP_004512379.1 CDS Metme_1456 NC_015572.1 1595810 1596802 R KEGG: cvi:CV_1189 two-component system; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase complement(1595810..1596802) Methylomonas methanica MC09 10671454 YP_004512380.1 CDS Metme_1457 NC_015572.1 1596804 1600208 R KEGG: aha:AHA_2220 two-component system sensor protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Hpt sensor hybrid histidine kinase complement(1596804..1600208) Methylomonas methanica MC09 10671455 YP_004512381.1 CDS Metme_1458 NC_015572.1 1600531 1600983 R KEGG: ttu:TERTU_2587 protein YhgI; protein YhgI complement(1600531..1600983) Methylomonas methanica MC09 10671456 YP_004512382.1 CDS Metme_1459 NC_015572.1 1601041 1601274 D hypothetical protein 1601041..1601274 Methylomonas methanica MC09 10671457 YP_004512383.1 CDS Metme_1460 NC_015572.1 1601392 1602276 D PFAM: Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL; TIGRFAM: Nitrogenase iron protein NifH; HAMAP: Nitrogenase iron protein NifH; KEGG: dar:Daro_1415 nitrogenase iron protein subunit NifH; nitrogenase iron protein 1601392..1602276 Methylomonas methanica MC09 10671458 YP_004512384.1 CDS Metme_1461 NC_015572.1 1602423 1603901 D TIGRFAM: Nitrogenase molybdenum-iron protein alpha chain; Nitrogenase component 1, alpha chain; KEGG: psa:PST_1327 MoFe protein, alpha subunit; PFAM: Nitrogenase/oxidoreductase, component 1; nitrogenase molybdenum-iron protein subunit alpha 1602423..1603901 Methylomonas methanica MC09 10671459 YP_004512385.1 CDS Metme_1462 NC_015572.1 1604087 1605658 D TIGRFAM: Nitrogenase molybdenum-iron protein beta chain; KEGG: ttu:TERTU_1539 nitrogenase molybdenum-iron protein beta chain; PFAM: Nitrogenase/oxidoreductase, component 1; nitrogenase molybdenum-iron protein subunit beta 1604087..1605658 Methylomonas methanica MC09 10671460 YP_004512386.1 CDS Metme_1463 NC_015572.1 1605721 1605933 D KEGG: alv:Alvin_1878 nitrogen fixation protein FixT; TIGRFAM: NifT/FixU; PFAM: NifT/FixU; nitrogen fixation protein FixT 1605721..1605933 Methylomonas methanica MC09 10671461 YP_004512387.1 CDS Metme_1464 NC_015572.1 1605945 1606145 D PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: azo:azo0542 FdxN protein; 4Fe-4S ferredoxin 1605945..1606145 Methylomonas methanica MC09 10671462 YP_004512388.1 CDS Metme_1465 NC_015572.1 1606286 1606552 D KEGG: ttu:TERTU_1542 hypothetical protein; hypothetical protein 1606286..1606552 Methylomonas methanica MC09 10671463 YP_004512389.1 CDS Metme_1466 NC_015572.1 1606561 1607325 D PFAM: LRV FeS4 cluster; Leucine rich repeat variant; KEGG: avn:Avin_01440 nitrogen fixing leucine rich variant repeat 4Fe-4S cluster protein; LRV FeS4 cluster domain-containing protein 1606561..1607325 Methylomonas methanica MC09 10671464 YP_004512390.1 CDS Metme_1467 NC_015572.1 1607318 1608280 D KEGG: mca:MCA2833 hypothetical protein; hypothetical protein 1607318..1608280 Methylomonas methanica MC09 10671465 YP_004512391.1 CDS Metme_1468 NC_015572.1 1608417 1610219 D PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: azo:azo3632 ABC transporter permease and ATP-binding protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 1608417..1610219 Methylomonas methanica MC09 10671466 YP_004512392.1 CDS Metme_1469 NC_015572.1 1610411 1611691 R PFAM: PEP-CTERM bacterial; KEGG: cmi:CMM_0897 hypothetical protein; hypothetical protein complement(1610411..1611691) Methylomonas methanica MC09 10671467 YP_004512393.1 CDS Metme_1470 NC_015572.1 1612550 1613308 D PFAM: PEP-CTERM bacterial; KEGG: nmu:Nmul_A1190 hypothetical protein; hypothetical protein 1612550..1613308 Methylomonas methanica MC09 10671468 YP_004512394.1 CDS Metme_1471 NC_015572.1 1613450 1615030 R KEGG: maq:Maqu_3450 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, formylation region; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(1613450..1615030) Methylomonas methanica MC09 10671469 YP_004512395.1 CDS Metme_1472 NC_015572.1 1615063 1615326 R PFAM: Helix-turn-helix, Fis-type; KEGG: tgr:Tgr7_0362 factor for inversion stimulation fis transcriptional activator-like protein; Fis family transcriptional regulator complement(1615063..1615326) Methylomonas methanica MC09 10671470 YP_004512396.1 CDS Metme_1473 NC_015572.1 1615327 1616304 R KEGG: lhk:LHK_03206 NifR3; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase; nifR3 family TIM-barrel protein complement(1615327..1616304) Methylomonas methanica MC09 10671471 YP_004512397.1 CDS Metme_1474 NC_015572.1 1616468 1618057 R KEGG: mca:MCA0127 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(1616468..1618057) Methylomonas methanica MC09 10671472 YP_004512398.1 CDS Metme_1475 NC_015572.1 1618331 1619152 R hypothetical protein complement(1618331..1619152) Methylomonas methanica MC09 10671473 YP_004512399.1 CDS Metme_1476 NC_015572.1 1619693 1621867 D PFAM: Glutamine synthetase, catalytic region; KEGG: amr:AM1_0336 glutamine synthetase, type III; glutamine synthetase 1619693..1621867 Methylomonas methanica MC09 10671474 YP_004512400.1 CDS Metme_1477 NC_015572.1 1622074 1622922 D PFAM: Ion transport; KEGG: potassium voltage-gated channel protein; Ion transport protein 1622074..1622922 Methylomonas methanica MC09 10671475 YP_004512401.1 CDS Metme_1479 NC_015572.1 1623384 1623872 R KEGG: nhl:Nhal_1232 hypothetical protein; hypothetical protein complement(1623384..1623872) Methylomonas methanica MC09 10671477 YP_004512402.1 CDS Metme_1480 NC_015572.1 1623931 1624398 R KEGG: hel:HELO_3852 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator complement(1623931..1624398) Methylomonas methanica MC09 10671478 YP_004512403.1 CDS Metme_1481 NC_015572.1 1624717 1625196 R KEGG: cyh:Cyan8802_3973 peroxiredoxin; PFAM: Glutathione peroxidase; peroxiredoxin complement(1624717..1625196) Methylomonas methanica MC09 10671479 YP_004512404.1 CDS Metme_1482 NC_015572.1 1625205 1625918 R hypothetical protein complement(1625205..1625918) Methylomonas methanica MC09 10671480 YP_004512405.1 CDS Metme_1483 NC_015572.1 1626105 1626596 R PFAM: Redoxin; KEGG: cvi:CV_4257 thioredoxin; redoxin domain-containing protein complement(1626105..1626596) Methylomonas methanica MC09 10671481 YP_004512406.1 CDS Metme_1484 NC_015572.1 1626695 1628278 D TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: mac:MA0592 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT; D-3-phosphoglycerate dehydrogenase 1626695..1628278 Methylomonas methanica MC09 10671482 YP_004512407.1 CDS Metme_1485 NC_015572.1 1628275 1628916 D TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: cbc:CbuK_0277 phosphoserine phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 1628275..1628916 Methylomonas methanica MC09 10671483 YP_004512408.1 CDS Metme_1486 NC_015572.1 1628984 1629739 D TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: mca:MCA1220 hypothetical protein; PFAM: Protein of unknown function DUF28; hypothetical protein 1628984..1629739 Methylomonas methanica MC09 10671484 YP_004512409.1 CDS Metme_1487 NC_015572.1 1629773 1630270 D PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: mca:MCA1221 crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC 1629773..1630270 Methylomonas methanica MC09 10671485 YP_004512410.1 CDS Metme_1488 NC_015572.1 1630267 1630869 D TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; KEGG: tgr:Tgr7_2235 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; Holliday junction ATP-dependent DNA helicase ruvA 1630267..1630869 Methylomonas methanica MC09 10671486 YP_004512411.1 CDS Metme_1489 NC_015572.1 1630866 1631903 D SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: lpp:lpp1534 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; Holliday junction ATP-dependent DNA helicase ruvB 1630866..1631903 Methylomonas methanica MC09 10671487 YP_004512412.1 CDS Metme_1490 NC_015572.1 1631922 1632317 D KEGG: mca:MCA1224 thioesterase; TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily; tol-pal system-associated acyl-CoA thioesterase 1631922..1632317 Methylomonas methanica MC09 10671488 YP_004512413.1 CDS Metme_1491 NC_015572.1 1632318 1632995 D KEGG: mca:MCA1226 TolQ protein; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ 1632318..1632995 Methylomonas methanica MC09 10671489 YP_004512414.1 CDS Metme_1492 NC_015572.1 1632992 1633438 D KEGG: mca:MCA1227 TolR protein; TIGRFAM: Biopolymer transport, TolR; PFAM: Biopolymer transport protein ExbD/TolR; protein TolR 1632992..1633438 Methylomonas methanica MC09 10671490 YP_004512415.1 CDS Metme_1493 NC_015572.1 1633452 1634897 D KEGG: mca:MCA1228 TolA protein, TIGRFAM: Tol-Pal system, TolA; TonB, C-terminal; PFAM: Tol-Pal system, TolA; protein TolA 1633452..1634897 Methylomonas methanica MC09 10671491 YP_004512416.1 CDS Metme_1494 NC_015572.1 1634916 1636199 D TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; HAMAP: Tol-Pal system beta propeller repeat-containing protein, TolB; KEGG: mca:MCA1229 translocation protein TolB; PFAM: TolB, N-terminal; WD40-like Beta Propeller; protein tolB 1634916..1636199 Methylomonas methanica MC09 10671492 YP_004512417.1 CDS Metme_1495 NC_015572.1 1636251 1636826 D KEGG: mca:MCA1230 OmpA family protein; TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; peptidoglycan-associated lipoprotein 1636251..1636826 Methylomonas methanica MC09 10671493 YP_004512418.1 CDS Metme_1496 NC_015572.1 1636823 1637689 D KEGG: mca:MCA1231 hypothetical protein; TIGRFAM: Tol-Pal system, YbgF; PFAM: Tetratricopeptide TPR2; tol-pal system protein YbgF 1636823..1637689 Methylomonas methanica MC09 10671494 YP_004512419.1 CDS Metme_1497 NC_015572.1 1637697 1638341 D PFAM: Radical SAM; KEGG: mca:MCA1232 radical activating enzyme family protein; radical SAM protein 1637697..1638341 Methylomonas methanica MC09 10671495 YP_004512420.1 CDS Metme_1498 NC_015572.1 1638325 1639035 D KEGG: pfs:PFLU4904 transcriptional regulator; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like; exoenzyme S synthesis protein B 1638325..1639035 Methylomonas methanica MC09 10671496 YP_004512421.1 CDS Metme_1499 NC_015572.1 1639129 1639743 D KEGG: ttu:TERTU_1840 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 1639129..1639743 Methylomonas methanica MC09 10671497 YP_004512422.1 CDS Metme_1500 NC_015572.1 1639786 1640514 D KEGG: svo:SVI_2679 metallo-beta-lactamase; metallo-beta-lactamase 1639786..1640514 Methylomonas methanica MC09 10671498 YP_004512423.1 CDS Metme_1501 NC_015572.1 1640620 1641996 D KEGG: mca:MCA1459 tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; manually curated; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; (dimethylallyl)adenosine tRNA methylthiotransferase 1640620..1641996 Methylomonas methanica MC09 10671499 YP_004512424.1 CDS Metme_1502 NC_015572.1 1641990 1642973 D PFAM: PhoH-like protein; KEGG: mca:MCA1458 PhoH family protein; PhoH family protein 1641990..1642973 Methylomonas methanica MC09 10671500 YP_004512425.1 CDS Metme_1503 NC_015572.1 1642977 1643438 D TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: pam:PANA_1139 YbeY; PFAM: Uncharacterised protein family UPF0054; metalloprotease ybeY 1642977..1643438 Methylomonas methanica MC09 10671501 YP_004512426.1 CDS Metme_1504 NC_015572.1 1643435 1644274 D KEGG: mca:MCA1456 magnesium and cobalt efflux protein CorC; PFAM: Cystathionine beta-synthase, core; Transporter-associated region; SMART: Cystathionine beta-synthase, core; hypothetical protein 1643435..1644274 Methylomonas methanica MC09 10671502 YP_004512427.1 CDS Metme_1505 NC_015572.1 1644363 1647143 R KEGG: dat:HRM2_43250 sensory box histidine kinase/response regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; multi-sensor hybrid histidine kinase complement(1644363..1647143) Methylomonas methanica MC09 10671503 YP_004512428.1 CDS Metme_1506 NC_015572.1 1647170 1647790 R KEGG: app:CAP2UW1_2790 hypothetical protein; hypothetical protein complement(1647170..1647790) Methylomonas methanica MC09 10671504 YP_004512429.1 CDS Metme_1507 NC_015572.1 1647806 1649818 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: rpf:Rpic12D_4602 TonB-dependent receptor; TonB-dependent receptor plug complement(1647806..1649818) Methylomonas methanica MC09 10671505 YP_004512430.1 CDS Metme_1508 NC_015572.1 1649967 1651736 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: nwa:Nwat_1160 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase complement(1649967..1651736) Methylomonas methanica MC09 10671506 YP_004512431.1 CDS Metme_1509 NC_015572.1 1651882 1652931 R KEGG: mfa:Mfla_2206 zinc-binding alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; mannitol dehydrogenase complement(1651882..1652931) Methylomonas methanica MC09 10671507 YP_004512432.1 CDS Metme_1510 NC_015572.1 1652948 1654060 R KEGG: ebi:EbC_28460 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; 12-oxophytodienoate reductase complement(1652948..1654060) Methylomonas methanica MC09 10671508 YP_004512433.1 CDS Metme_1511 NC_015572.1 1654093 1655028 R KEGG: gca:Galf_1685 type II and III secretion system protein; type II and III secretion system protein complement(1654093..1655028) Methylomonas methanica MC09 10671509 YP_004512434.1 CDS Metme_1512 NC_015572.1 1655018 1656451 R PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; TIGRFAM: Glycogen/starch synthases, ADP-glucose type; HAMAP: Glycogen/starch synthases, ADP-glucose type; KEGG: mca:MCA1476 glycogen synthase; Glycogen synthase complement(1655018..1656451) Methylomonas methanica MC09 10671510 YP_004512435.1 CDS Metme_1513 NC_015572.1 1656563 1658743 R KEGG: mca:MCA1475 glycogen branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; HAMAP: 1,4-alpha-glucan branching enzyme, core region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; 1,4-alpha-glucan-branching protein complement(1656563..1658743) Methylomonas methanica MC09 10671511 YP_004512436.1 CDS Metme_1514 NC_015572.1 1658961 1660241 D PFAM: Nucleotidyl transferase; TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase; KEGG: mca:MCA1474 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 1658961..1660241 Methylomonas methanica MC09 10671512 YP_004512437.1 CDS Metme_1515 NC_015572.1 1660231 1661922 D PFAM: Glycoside hydrolase, family 57, core; KEGG: tgr:Tgr7_2072 glycoside hydrolase, family 57; glycoside hydrolase 1660231..1661922 Methylomonas methanica MC09 10671513 YP_004512438.1 CDS Metme_1516 NC_015572.1 1661935 1663413 D TIGRFAM: Glycoside hydrolase, family 77; KEGG: mmb:Mmol_0831 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; 4-alpha-glucanotransferase 1661935..1663413 Methylomonas methanica MC09 10671514 YP_004512439.1 CDS Metme_1517 NC_015572.1 1663423 1664313 R KEGG: mca:MCA0300 MxaJ protein; TIGRFAM: quinoprotein dehydrogenase-associated ABC transporter substrate-binding protein; SMART: Extracellular solute-binding protein, family 3; quinoprotein dehydrogenase-associated ABC transporter substrate-binding protein complement(1663423..1664313) Methylomonas methanica MC09 10671515 YP_004512440.1 CDS Metme_1518 NC_015572.1 1664377 1666227 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; KEGG: mca:MCA0299 methanol dehydrogenase, large subunit, PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal; PQQ-dependent dehydrogenase complement(1664377..1666227) Methylomonas methanica MC09 10671516 YP_004512441.1 CDS Metme_1519 NC_015572.1 1666607 1667236 R PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: cya:CYA_0467 methionine-S-sulfoxide reductase; peptide methionine sulfoxide reductase complement(1666607..1667236) Methylomonas methanica MC09 10671517 YP_004512442.1 CDS Metme_1520 NC_015572.1 1667313 1668191 D PFAM: Heat shock protein Hsp33 protein; KEGG: nhl:Nhal_1877 HSP33 protein; heat shock protein 33 1667313..1668191 Methylomonas methanica MC09 10671518 YP_004512443.1 CDS Metme_1521 NC_015572.1 1668199 1668972 D KEGG: mca:MCA1710 hypothetical protein; hypothetical protein 1668199..1668972 Methylomonas methanica MC09 10671519 YP_004512444.1 CDS Metme_1522 NC_015572.1 1669038 1669631 R PFAM: Nitroreductase-like; KEGG: mca:MCA2267 nitroreductase; nitroreductase complement(1669038..1669631) Methylomonas methanica MC09 10671520 YP_004512445.1 CDS Metme_1523 NC_015572.1 1670240 1671799 D PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region; integrase catalytic subunit 1670240..1671799 Methylomonas methanica MC09 10671522 YP_004512446.1 CDS Metme_1525 NC_015572.1 1671918 1673000 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(1671918..1673000) Methylomonas methanica MC09 10671523 YP_004512447.1 CDS Metme_1526 NC_015572.1 1672997 1673497 R KEGG: pna:Pnap_1740 transposase; transposase complement(1672997..1673497) Methylomonas methanica MC09 10671524 YP_004512448.1 CDS Metme_1527 NC_015572.1 1674256 1674789 R KEGG: lhk:LHK_01799 probable integrase/recombinase; integrase/recombinase complement(1674256..1674789) Methylomonas methanica MC09 10671525 YP_004512449.1 CDS Metme_1528 NC_015572.1 1675239 1675628 R hypothetical protein complement(1675239..1675628) Methylomonas methanica MC09 10671526 YP_004512450.1 CDS Metme_1529 NC_015572.1 1675969 1677039 R KEGG: app:CAP2UW1_2492 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; 12-oxophytodienoate reductase complement(1675969..1677039) Methylomonas methanica MC09 10671527 YP_004512451.1 CDS Metme_1530 NC_015572.1 1677079 1677957 R PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: rfr:Rfer_0805 pirin-like; pirin complement(1677079..1677957) Methylomonas methanica MC09 10671528 YP_004512452.1 CDS Metme_1531 NC_015572.1 1678063 1678980 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tmz:Tmz1t_3299 transcriptional regulator, LysR family; LysR family transcriptional regulator 1678063..1678980 Methylomonas methanica MC09 10671529 YP_004512453.1 CDS Metme_1532 NC_015572.1 1679030 1680667 R KEGG: ppd:Ppro_1221 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer complement(1679030..1680667) Methylomonas methanica MC09 10671530 YP_004512454.1 CDS Metme_1533 NC_015572.1 1681019 1681228 D hypothetical protein 1681019..1681228 Methylomonas methanica MC09 10671531 YP_004512455.1 CDS Metme_1534 NC_015572.1 1681362 1682522 D KEGG: mca:MCA0105 D-alanyl-D-alanine carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; Beta-lactamase 1681362..1682522 Methylomonas methanica MC09 10671532 YP_004512456.1 CDS Metme_1535 NC_015572.1 1682522 1683361 D KEGG: mca:MCA0106 D-amino acid aminotransferase, PFAM: Aminotransferase, class IV; D-amino-acid transaminase 1682522..1683361 Methylomonas methanica MC09 10671533 YP_004512457.1 CDS Metme_1536 NC_015572.1 1683358 1683624 D KEGG: rpi:Rpic_0182 hypothetical protein; HAMAP: Protein of unknown function DUF493; PFAM: Protein of unknown function DUF493; hypothetical protein 1683358..1683624 Methylomonas methanica MC09 10671534 YP_004512458.1 CDS Metme_1537 NC_015572.1 1683632 1684246 D PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: mca:MCA0109 lipoate-protein ligase B; Octanoyltransferase 1683632..1684246 Methylomonas methanica MC09 10671535 YP_004512459.1 CDS Metme_1538 NC_015572.1 1684243 1685217 D KEGG: mca:MCA0110 lipoyl synthase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB; lipoyl synthase 1684243..1685217 Methylomonas methanica MC09 10671536 YP_004512460.1 CDS Metme_1539 NC_015572.1 1685495 1687912 D PFAM: Mechanosensitive ion channel MscS; KEGG: mca:MCA2608 mechanosensitive ion channel family protein; mechanosensitive ion channel MscS 1685495..1687912 Methylomonas methanica MC09 10671537 YP_004512461.1 CDS Metme_1540 NC_015572.1 1688019 1689257 D KEGG: rpf:Rpic12D_4296 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1688019..1689257 Methylomonas methanica MC09 10671538 YP_004512462.1 CDS Metme_1541 NC_015572.1 1689260 1692367 D PFAM: Acriflavin resistance protein; KEGG: hse:Hsero_1521 cation/multidrug efflux pump transmembrane protein; acriflavin resistance protein 1689260..1692367 Methylomonas methanica MC09 10671539 YP_004512463.1 CDS Metme_1542 NC_015572.1 1692364 1695474 D PFAM: Acriflavin resistance protein; KEGG: rsl:RPSI07_mp1230 multidrug efflux system, subunit C; acriflavin resistance protein 1692364..1695474 Methylomonas methanica MC09 10671540 YP_004512464.1 CDS Metme_1543 NC_015572.1 1695490 1696962 D KEGG: hse:Hsero_1523 NodT family protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 1695490..1696962 Methylomonas methanica MC09 10671541 YP_004512465.1 CDS Metme_1544 NC_015572.1 1697088 1698089 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: tgr:Tgr7_0559 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 1697088..1698089 Methylomonas methanica MC09 10671542 YP_004512466.1 CDS Metme_1545 NC_015572.1 1698245 1698679 D TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: mca:MCA2038 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 1698245..1698679 Methylomonas methanica MC09 10671543 YP_004512467.1 CDS Metme_1546 NC_015572.1 1698704 1698934 D TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: mca:MCA2037 ribosomal protein S18; PFAM: Ribosomal protein S18; 30S ribosomal protein S18 1698704..1698934 Methylomonas methanica MC09 10671544 YP_004512468.1 CDS Metme_1547 NC_015572.1 1698959 1699870 D KEGG: mca:MCA2036 hypothetical protein; hypothetical protein 1698959..1699870 Methylomonas methanica MC09 10671545 YP_004512469.1 CDS Metme_1548 NC_015572.1 1699916 1700362 D TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: mca:MCA2035 ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; 50S ribosomal protein L9 1699916..1700362 Methylomonas methanica MC09 10671546 YP_004512470.1 CDS Metme_1549 NC_015572.1 1700367 1701311 D PFAM: NAD-dependent epimerase/dehydratase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; HAMAP: ADP-L-glycero-D-manno-heptose-6-epimerase; KEGG: pca:Pcar_0024 ADP-L-glycero-D-mannoheptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 1700367..1701311 Methylomonas methanica MC09 10671547 YP_004512471.1 CDS Metme_1552 NC_015572.1 1702861 1703514 R KEGG: tde:TDE1831 hypothetical protein; hypothetical protein complement(1702861..1703514) Methylomonas methanica MC09 10671550 YP_004512472.1 CDS Metme_1553 NC_015572.1 1703639 1704016 R hypothetical protein complement(1703639..1704016) Methylomonas methanica MC09 10671551 YP_004512473.1 CDS Metme_1554 NC_015572.1 1704097 1704381 R KEGG: noc:Noc_0575 hypothetical protein; hypothetical protein complement(1704097..1704381) Methylomonas methanica MC09 10671552 YP_004512474.1 CDS Metme_1555 NC_015572.1 1704372 1704806 R hypothetical protein complement(1704372..1704806) Methylomonas methanica MC09 10671553 YP_004512475.1 CDS Metme_1556 NC_015572.1 1705058 1705528 R PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; KEGG: 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(1705058..1705528) Methylomonas methanica MC09 10671554 YP_004512476.1 CDS Metme_1557 NC_015572.1 1705720 1706223 R hypothetical protein complement(1705720..1706223) Methylomonas methanica MC09 10671555 YP_004512477.1 CDS Metme_1558 NC_015572.1 1706360 1707543 D KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein join(1706360..1706623,1706623..1707543) Methylomonas methanica MC09 10671556 YP_004512478.1 CDS Metme_1559 NC_015572.1 1707846 1708829 D KEGG: slt:Slit_0377 integron integrase; TIGRFAM: Integrase, integron-type; PFAM: Integrase, catalytic core, phage; integron integrase 1707846..1708829 Methylomonas methanica MC09 10671557 YP_004512479.1 CDS Metme_1560 NC_015572.1 1708941 1709162 R hypothetical protein complement(1708941..1709162) Methylomonas methanica MC09 10671558 YP_004512480.1 CDS Metme_1561 NC_015572.1 1709434 1710456 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRA2371 transposase; integrase catalytic subunit complement(1709434..1710456) Methylomonas methanica MC09 10671559 YP_004512481.1 CDS Metme_1562 NC_015572.1 1710514 1711014 R KEGG: pna:Pnap_1740 transposase; transposase complement(1710514..1711014) Methylomonas methanica MC09 10671560 YP_004512482.1 CDS Metme_1563 NC_015572.1 1711039 1711344 R hypothetical protein complement(1711039..1711344) Methylomonas methanica MC09 10671561 YP_004512483.1 CDS Metme_1564 NC_015572.1 1711830 1712357 R PFAM: Bacterial transferase hexapeptide repeat; KEGG: csa:Csal_0401 anhydrase 3 protein; transferase hexapeptide repeat containing protein complement(1711830..1712357) Methylomonas methanica MC09 10671562 YP_004512484.1 CDS Metme_1565 NC_015572.1 1712440 1713450 D KEGG: cpc:Cpar_0308 transmembrane protein; transmembrane protein 1712440..1713450 Methylomonas methanica MC09 10671563 YP_004512485.1 CDS Metme_1566 NC_015572.1 1713453 1714127 D KEGG: gur:Gura_2275 hypothetical protein; hypothetical protein 1713453..1714127 Methylomonas methanica MC09 10671564 YP_004512486.1 CDS Metme_1567 NC_015572.1 1714313 1715254 D KEGG: lch:Lcho_1349 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; cytochrome-c3 hydrogenase 1714313..1715254 Methylomonas methanica MC09 10671565 YP_004512487.1 CDS Metme_1568 NC_015572.1 1715256 1716785 D KEGG: lch:Lcho_1348 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; cytochrome-c3 hydrogenase 1715256..1716785 Methylomonas methanica MC09 10671566 YP_004512488.1 CDS Metme_1569 NC_015572.1 1716790 1717251 D KEGG: lch:Lcho_1347 hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein; hydrogenase maturation protease 1716790..1717251 Methylomonas methanica MC09 10671567 YP_004512489.1 CDS Metme_1570 NC_015572.1 1717248 1719890 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; PAS fold; KEGG: lch:Lcho_1346 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1717248..1719890 Methylomonas methanica MC09 10671568 YP_004512490.1 CDS Metme_1571 NC_015572.1 1720070 1722061 D KEGG: ppu:PP_4658 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer 1720070..1722061 Methylomonas methanica MC09 10671569 YP_004512491.1 CDS Metme_1572 NC_015572.1 1722145 1722711 R KEGG: mca:MCA1335 chorismate--pyruvate lyase, HAMAP: Chorismate--pyruvate lyase; PFAM: Chorismate--pyruvate lyase; chorismate--pyruvate lyase complement(1722145..1722711) Methylomonas methanica MC09 10671570 YP_004512492.1 CDS Metme_1573 NC_015572.1 1722860 1724422 R KEGG: dar:Daro_3620 hypothetical protein; hypothetical protein complement(1722860..1724422) Methylomonas methanica MC09 10671571 YP_004512493.1 CDS Metme_1574 NC_015572.1 1724500 1727322 R PFAM: Patatin; KEGG: net:Neut_1317 patatin; patatin complement(1724500..1727322) Methylomonas methanica MC09 10671572 YP_004512494.1 CDS Metme_1575 NC_015572.1 1727392 1728693 R KEGG: azo:azo3763 hypothetical protein; hypothetical protein complement(1727392..1728693) Methylomonas methanica MC09 10671573 YP_004512495.1 CDS Metme_1576 NC_015572.1 1728720 1729883 R PFAM: Patatin; KEGG: azo:azo3762 patatin-like protein; patatin complement(1728720..1729883) Methylomonas methanica MC09 10671574 YP_004512496.1 CDS Metme_1577 NC_015572.1 1730006 1731019 R KEGG: mca:MCA1289 hypothetical protein; hypothetical protein complement(1730006..1731019) Methylomonas methanica MC09 10671575 YP_004512497.1 CDS Metme_1578 NC_015572.1 1731135 1733780 R KEGG: dar:Daro_3599 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; hypothetical protein complement(1731135..1733780) Methylomonas methanica MC09 10671576 YP_004512498.1 CDS Metme_1579 NC_015572.1 1733773 1735218 R KEGG: dar:Daro_3600 hypothetical protein; hypothetical protein complement(1733773..1735218) Methylomonas methanica MC09 10671577 YP_004512499.1 CDS Metme_1580 NC_015572.1 1735212 1735829 R KEGG: app:CAP2UW1_2370 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(1735212..1735829) Methylomonas methanica MC09 10671578 YP_004512500.1 CDS Metme_1581 NC_015572.1 1736185 1736694 R PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: mca:MCA1137 hydrogenase subunit; NADH ubiquinone oxidoreductase 20 kDa subunit complement(1736185..1736694) Methylomonas methanica MC09 10671579 YP_004512501.1 CDS Metme_1582 NC_015572.1 1736704 1738287 R PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; KEGG: mca:MCA1138 hydrogenase subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit complement(1736704..1738287) Methylomonas methanica MC09 10671580 YP_004512502.1 CDS Metme_1583 NC_015572.1 1738284 1739747 R KEGG: mca:MCA1139 hydrogenase 4 subunit F; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) complement(1738284..1739747) Methylomonas methanica MC09 10671581 YP_004512503.1 CDS Metme_1584 NC_015572.1 1739744 1740421 R KEGG: mca:MCA1140 hydrogenase subunit; hydrogenase subunit complement(1739744..1740421) Methylomonas methanica MC09 10671582 YP_004512504.1 CDS Metme_1585 NC_015572.1 1740421 1741365 R KEGG: mca:MCA1141 hydrogenase subunit; hydrogenase subunit complement(1740421..1741365) Methylomonas methanica MC09 10671583 YP_004512505.1 CDS Metme_1586 NC_015572.1 1741362 1743482 R KEGG: mca:MCA1142 hydrogenase 4 subunit B; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) complement(1741362..1743482) Methylomonas methanica MC09 10671584 YP_004512506.1 CDS Metme_1587 NC_015572.1 1743598 1745238 R PFAM: Sulphate transporter; KEGG: mca:MCA2472 sulfate transporter family protein; sulfate transporter complement(1743598..1745238) Methylomonas methanica MC09 10671585 YP_004512507.1 CDS Metme_1588 NC_015572.1 1745590 1747533 D KEGG: hypothetical protein; hypothetical protein 1745590..1747533 Methylomonas methanica MC09 10671586 YP_004512508.1 CDS Metme_1589 NC_015572.1 1747882 1749711 D PFAM: Na/Pi-cotransporter; KEGG: mgm:Mmc1_0226 Na+/Pi-cotransporter; Na+/Picotransporter 1747882..1749711 Methylomonas methanica MC09 10671587 YP_004512509.1 CDS Metme_1590 NC_015572.1 1749704 1749943 D hypothetical protein 1749704..1749943 Methylomonas methanica MC09 10671588 YP_004512510.1 CDS Metme_1592 NC_015572.1 1750694 1751197 R KEGG: mpt:Mpe_A2805 nickel responsive regulator; HAMAP: nickel-responsive regulator; PFAM: Transcription factor, NikR, nickel binding C-terminal; CopG-like DNA-binding; CopG family transcriptional regulator complement(1750694..1751197) Methylomonas methanica MC09 10671590 YP_004512511.1 CDS Metme_1593 NC_015572.1 1751278 1751856 D KEGG: amr:AM1_3961 hypothetical protein; hypothetical protein 1751278..1751856 Methylomonas methanica MC09 10671591 YP_004512512.1 CDS Metme_1594 NC_015572.1 1751871 1752278 D KEGG: cyj:Cyan7822_5101 hypothetical protein; hypothetical protein 1751871..1752278 Methylomonas methanica MC09 10671592 YP_004512513.1 CDS Metme_1595 NC_015572.1 1752284 1752679 D PFAM: Copper resistance protein CopC, core; KEGG: mca:MCA2170 copper resistance protein; copper resistance protein CopC 1752284..1752679 Methylomonas methanica MC09 10671593 YP_004512514.1 CDS Metme_1596 NC_015572.1 1752676 1753296 D KEGG: nwa:Nwat_3063 hypothetical protein; hypothetical protein 1752676..1753296 Methylomonas methanica MC09 10671594 YP_004512515.1 CDS Metme_1597 NC_015572.1 1753327 1753812 D KEGG: bja:blr6985 hypothetical protein; hypothetical protein 1753327..1753812 Methylomonas methanica MC09 10671595 YP_004512516.1 CDS Metme_1598 NC_015572.1 1753855 1754289 D hypothetical protein 1753855..1754289 Methylomonas methanica MC09 10671596 YP_004512517.1 CDS Metme_1599 NC_015572.1 1754367 1755032 D KEGG: nhl:Nhal_0478 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 1754367..1755032 Methylomonas methanica MC09 10671597 YP_004512518.1 CDS Metme_1600 NC_015572.1 1755029 1756354 D KEGG: mmb:Mmol_1757 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 1755029..1756354 Methylomonas methanica MC09 10671598 YP_004512519.1 CDS Metme_1601 NC_015572.1 1756537 1758789 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: mpt:Mpe_A1512 TonB-dependent receptor; TonB-dependent receptor 1756537..1758789 Methylomonas methanica MC09 10671599 YP_004512520.1 CDS Metme_1602 NC_015572.1 1759203 1759769 D KEGG: oan:Oant_2438 HupE/UreJ protein; HupE/UreJ protein 1759203..1759769 Methylomonas methanica MC09 10671600 YP_004512521.1 CDS Metme_1603 NC_015572.1 1759918 1760286 D hypothetical protein 1759918..1760286 Methylomonas methanica MC09 10671601 YP_004512522.1 CDS Metme_1604 NC_015572.1 1760760 1762367 R KEGG: psa:PST_2110 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer complement(1760760..1762367) Methylomonas methanica MC09 10671602 YP_004512523.1 CDS Metme_1605 NC_015572.1 1762425 1763216 R KEGG: mca:MCA1787 hypothetical protein; hypothetical protein complement(1762425..1763216) Methylomonas methanica MC09 10671603 YP_004512524.1 CDS Metme_1606 NC_015572.1 1763299 1763946 R PFAM: Cytochrome c, class I; KEGG: mca:MCA2395 cytochrome c family protein; cytochrome c class I complement(1763299..1763946) Methylomonas methanica MC09 10671604 YP_004512525.1 CDS Metme_1607 NC_015572.1 1763949 1765568 R PFAM: Cytochrome c oxidase, subunit I; KEGG: mca:MCA2396 cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I complement(1763949..1765568) Methylomonas methanica MC09 10671605 YP_004512526.1 CDS Metme_1608 NC_015572.1 1765561 1766085 R PFAM: Cytochrome c oxidase subunit II C-terminal; KEGG: mca:MCA2397 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II complement(1765561..1766085) Methylomonas methanica MC09 10671606 YP_004512527.1 CDS Metme_1609 NC_015572.1 1766095 1766247 R KEGG: mca:MCA2399 cytochrome c oxidase, CbaD subunit; cytochrome c oxidase, CbaD subunit complement(1766095..1766247) Methylomonas methanica MC09 10671607 YP_004512528.1 CDS Metme_1610 NC_015572.1 1766555 1767229 R PFAM: Methyltransferase-16, KEGG: dar:Daro_0513 hypothetical protein; methyltransferase-16 complement(1766555..1767229) Methylomonas methanica MC09 10671608 YP_004512529.1 CDS Metme_1611 NC_015572.1 1767545 1768096 R KEGG: pna:Pnap_2516 late embryogenesis abundant protein; late embryogenesis abundant protein complement(1767545..1768096) Methylomonas methanica MC09 10671609 YP_004512530.1 CDS Metme_1612 NC_015572.1 1768447 1769706 D PFAM: Aldehyde dehydrogenase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: cja:CJA_0785 gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 1768447..1769706 Methylomonas methanica MC09 10671610 YP_004512531.1 CDS Metme_1613 NC_015572.1 1769706 1770362 D PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: tkm:TK90_2128 nicotinate (nicotinamide) nucleotide adenylyltransferase; nicotinate-nucleotide adenylyltransferase 1769706..1770362 Methylomonas methanica MC09 10671611 YP_004512532.1 CDS Metme_1614 NC_015572.1 1770341 1770682 D KEGG: aeh:Mlg_0405 iojap-like protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein; iojap family protein 1770341..1770682 Methylomonas methanica MC09 10671612 YP_004512533.1 CDS Metme_1615 NC_015572.1 1770765 1771448 D KEGG: maq:Maqu_3159 hypothetical protein; hypothetical protein 1770765..1771448 Methylomonas methanica MC09 10671613 YP_004512534.1 CDS Metme_1616 NC_015572.1 1771438 1772616 D KEGG: maq:Maqu_3158 hypothetical protein; hypothetical protein 1771438..1772616 Methylomonas methanica MC09 10671614 YP_004512535.1 CDS Metme_1617 NC_015572.1 1772971 1773498 R hypothetical protein complement(1772971..1773498) Methylomonas methanica MC09 10671615 YP_004512536.1 CDS Metme_1618 NC_015572.1 1774186 1774692 R KEGG: pca:Pcar_1473 transposase; transposase complement(1774186..1774692) Methylomonas methanica MC09 10671616 YP_004512537.1 CDS Metme_1619 NC_015572.1 1775046 1775618 R PFAM: RES; KEGG: gdj:Gdia_1686 RES domain protein; RES domain-containing protein complement(1775046..1775618) Methylomonas methanica MC09 10671617 YP_004512538.1 CDS Metme_1620 NC_015572.1 1775615 1775980 R KEGG: gdj:Gdia_1685 hypothetical protein; hypothetical protein complement(1775615..1775980) Methylomonas methanica MC09 10671618 YP_004512539.1 CDS Metme_1621 NC_015572.1 1776395 1777888 D KEGG: ttu:TERTU_1520 nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: Nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; Radical SAM; nitrogenase cofactor biosynthesis protein NifB 1776395..1777888 Methylomonas methanica MC09 10671619 YP_004512540.1 CDS Metme_1622 NC_015572.1 1778057 1778335 D PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: slt:Slit_0836 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1778057..1778335 Methylomonas methanica MC09 10671620 YP_004512541.1 CDS Metme_1623 NC_015572.1 1778341 1778772 D KEGG: cyt:cce_0545 nitrogenase-associated protein; TIGRFAM: Nitrogenase-associated protein; PFAM: Arsenate reductase-like; nitrogenase-associated protein 1778341..1778772 Methylomonas methanica MC09 10671621 YP_004512542.1 CDS Metme_1624 NC_015572.1 1778769 1780049 D PFAM: Flavodoxin/nitric oxide synthase; KEGG: dar:Daro_1451 beta-lactamase-like:flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 1778769..1780049 Methylomonas methanica MC09 10671622 YP_004512543.1 CDS Metme_1625 NC_015572.1 1780305 1780592 D PFAM: Ferredoxin; KEGG: mca:MCA0760 ferredoxin, 2Fe-2S; ferredoxin 1780305..1780592 Methylomonas methanica MC09 10671623 YP_004512544.1 CDS Metme_1626 NC_015572.1 1780611 1780961 D PFAM: Ferredoxin; KEGG: alv:Alvin_3042 ferredoxin; ferredoxin 1780611..1780961 Methylomonas methanica MC09 10671624 YP_004512545.1 CDS Metme_1627 NC_015572.1 1781042 1781623 D PFAM: NifQ; KEGG: slt:Slit_0833 NifQ family protein; NifQ family protein 1781042..1781623 Methylomonas methanica MC09 10671625 YP_004512546.1 CDS Metme_1628 NC_015572.1 1781777 1782895 R KEGG: dar:Daro_2497 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer complement(1781777..1782895) Methylomonas methanica MC09 10671626 YP_004512547.1 CDS Metme_1629 NC_015572.1 1783417 1785156 R KEGG: rha:RHA1_ro01797 sulfite reductase [NADPH] flavoprotein alpha-component; PFAM: FAD-binding, type 1; Flavodoxin/nitric oxide synthase; Oxidoreductase FAD/NAD(P)-binding; NADPH--hemoprotein reductase complement(1783417..1785156) Methylomonas methanica MC09 10671627 YP_004512548.1 CDS Metme_1630 NC_015572.1 1785257 1790740 R KEGG: mfa:Mfla_2734 glutamate synthase (NADPH); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; glutamate synthase complement(1785257..1790740) Methylomonas methanica MC09 10671628 YP_004512549.1 CDS Metme_1631 NC_015572.1 1790994 1792208 D KEGG: mca:MCA1754 monooxygenase, FAD-binding; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 1790994..1792208 Methylomonas methanica MC09 10671629 YP_004512550.1 CDS Metme_1632 NC_015572.1 1792418 1795063 R KEGG: mca:MCA0565 protein-P-II uridylyltransferase; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Nucleotidyltransferase; Metal-dependent phosphohydrolase, HD region, subdomain; Amino acid-binding ACT; TIGRFAM: Protein-PII uridylyltransferase; HAMAP: Protein-PII uridylyltransferase; SMART: Metal-dependent phosphohydrolase, HD region; UTP-GlnB uridylyltransferase, GlnD complement(1792418..1795063) Methylomonas methanica MC09 10671630 YP_004512551.1 CDS Metme_1633 NC_015572.1 1795060 1795824 R TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: tgr:Tgr7_1158 methionine aminopeptidase; PFAM: Peptidase M24, structural domain; methionine aminopeptidase complement(1795060..1795824) Methylomonas methanica MC09 10671631 YP_004512552.1 CDS Metme_1634 NC_015572.1 1796091 1796834 D KEGG: mca:MCA0567 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; 30S ribosomal protein S2 1796091..1796834 Methylomonas methanica MC09 10671632 YP_004512553.1 CDS Metme_1635 NC_015572.1 1796961 1797839 D TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: mca:MCA0568 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; elongation factor Ts 1796961..1797839 Methylomonas methanica MC09 10671633 YP_004512554.1 CDS Metme_1636 NC_015572.1 1797924 1798643 D KEGG: mca:MCA0569 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase; uridylate kinase 1797924..1798643 Methylomonas methanica MC09 10671634 YP_004512555.1 CDS Metme_1637 NC_015572.1 1798645 1799202 D TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: mca:MCA0570 ribosome recycling factor; PFAM: Ribosome recycling factor; Ribosome-recycling factor 1798645..1799202 Methylomonas methanica MC09 10671635 YP_004512556.1 CDS Metme_1638 NC_015572.1 1799220 1799984 D PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: mca:MCA0571 undecaprenyl diphosphate synthase; UDP pyrophosphate synthase 1799220..1799984 Methylomonas methanica MC09 10671636 YP_004512557.1 CDS Metme_1639 NC_015572.1 1800020 1800925 D PFAM: Phosphatidate cytidylyltransferase; KEGG: mca:MCA0572 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1800020..1800925 Methylomonas methanica MC09 10671637 YP_004512558.1 CDS Metme_1640 NC_015572.1 1800922 1802106 D PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: mca:MCA0573 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1800922..1802106 Methylomonas methanica MC09 10671638 YP_004512559.1 CDS Metme_1641 NC_015572.1 1802106 1803470 D KEGG: mca:MCA0574 membrane-associated zinc metalloprotease, TIGRFAM: Peptidase M50, membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF; zinc metalloprotease 1802106..1803470 Methylomonas methanica MC09 10671639 YP_004512560.1 CDS Metme_1642 NC_015572.1 1803535 1804245 D PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: mca:MCA0575 thiol:disulfide interchange protein DsbC; disulfide bond isomerase DsbC/G 1803535..1804245 Methylomonas methanica MC09 10671640 YP_004512561.1 CDS Metme_1643 NC_015572.1 1804343 1806988 R SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: mca:MCA0576 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, clamp; DNA mismatch repair protein mutS complement(1804343..1806988) Methylomonas methanica MC09 10671641 YP_004512562.1 CDS Metme_1644 NC_015572.1 1807495 1808424 D KEGG: pat:Patl_2849 beta-lactamase-like; beta-lactamase-like protein 1807495..1808424 Methylomonas methanica MC09 10671642 YP_004512563.1 CDS Metme_1645 NC_015572.1 1808799 1811327 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nml:Namu_1568 endonuclease/exonuclease/phosphatase; hypothetical protein 1808799..1811327 Methylomonas methanica MC09 10671643 YP_004512564.1 CDS Metme_1646 NC_015572.1 1811382 1811954 D KEGG: hch:HCH_06681 hypothetical protein; hypothetical protein 1811382..1811954 Methylomonas methanica MC09 10671644 YP_004512565.1 CDS Metme_1647 NC_015572.1 1811966 1813804 D KEGG: tbd:Tbd_0356 5'-nucleotidase; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase; 5'-nucleotidase 1811966..1813804 Methylomonas methanica MC09 10671645 YP_004512566.1 CDS Metme_1648 NC_015572.1 1813956 1814642 R KEGG: mmw:Mmwyl1_4413 phosphate uptake regulator PhoU; TIGRFAM: PhoU; PFAM: PhoU; phosphate uptake regulator PhoU complement(1813956..1814642) Methylomonas methanica MC09 10671646 YP_004512567.1 CDS Metme_1649 NC_015572.1 1815194 1816777 D KEGG: mca:MCA1194 methane monooxygenase, A subunit, alpha chain; PFAM: Methane/phenol/toluene hydroxylase; methane monooxygenase 1815194..1816777 Methylomonas methanica MC09 10671647 YP_004512568.1 CDS Metme_1650 NC_015572.1 1816809 1817987 D KEGG: msl:Msil_1263 methane monooxygenase; PFAM: Methane/phenol/toluene hydroxylase; methane monooxygenase 1816809..1817987 Methylomonas methanica MC09 10671648 YP_004512569.1 CDS Metme_1651 NC_015572.1 1817997 1818422 D PFAM: Monooxygenase component MmoB/DmpM; KEGG: mca:MCA1196 methane monooxygenase, B subunit; monooxygenase component MmoB/DmpM 1817997..1818422 Methylomonas methanica MC09 10671649 YP_004512570.1 CDS Metme_1652 NC_015572.1 1818432 1818929 D KEGG: mca:MCA1198 methane monooxygenase, A subunit, gamma chain; PFAM: Methane monooxygenase, gamma chain; methane monooxygenase 1818432..1818929 Methylomonas methanica MC09 10671650 YP_004512571.1 CDS Metme_1653 NC_015572.1 1819141 1819401 D KEGG: mca:MCA1199 methane monooxygenase, D subunit; hypothetical protein 1819141..1819401 Methylomonas methanica MC09 10671651 YP_004512572.1 CDS Metme_1654 NC_015572.1 1819403 1820437 D KEGG: mca:MCA1200 methane monooxygenase, C subunit; PFAM: Oxidoreductase FAD-binding region; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; methane monooxygenase 1819403..1820437 Methylomonas methanica MC09 10671652 YP_004512573.1 CDS Metme_1655 NC_015572.1 1820443 1820736 D KEGG: mca:MCA1201 hypothetical protein; hypothetical protein 1820443..1820736 Methylomonas methanica MC09 10671653 YP_004512574.1 CDS Metme_1656 NC_015572.1 1820835 1822517 D PFAM: Chaperonin Cpn60/TCP-1; KEGG: mca:MCA1202 chaperonin, 60 kDa subunit; chaperonin Cpn60/TCP-1 1820835..1822517 Methylomonas methanica MC09 10671654 YP_004512575.1 CDS Metme_1657 NC_015572.1 1822900 1824657 D KEGG: mca:MCA1205 sigma-54 dependent transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; Fis family transcriptional regulator 1822900..1824657 Methylomonas methanica MC09 10671655 YP_004512576.1 CDS Metme_1658 NC_015572.1 1824718 1825152 R KEGG: avn:Avin_22770 hypothetical protein; hypothetical protein complement(1824718..1825152) Methylomonas methanica MC09 10671656 YP_004512577.1 CDS Metme_1659 NC_015572.1 1825239 1825841 R PFAM: Methyltransferase type 12; KEGG: pin:Ping_2544 methyltransferase type 12; type 12 methyltransferase complement(1825239..1825841) Methylomonas methanica MC09 10671657 YP_004512578.1 CDS Metme_1660 NC_015572.1 1826134 1826979 D KEGG: dps:DP0981 hypothetical protein; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; PFAM: Polyphosphate kinase 2; polyphosphate:nucleotide phosphotransferase 1826134..1826979 Methylomonas methanica MC09 10671658 YP_004512579.1 CDS Metme_1661 NC_015572.1 1827606 1830905 D PFAM: Acriflavin resistance protein; KEGG: mca:MCA0178 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 1827606..1830905 Methylomonas methanica MC09 10671659 YP_004512580.1 CDS Metme_1662 NC_015572.1 1830902 1832146 D KEGG: mca:MCA0177 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1830902..1832146 Methylomonas methanica MC09 10671660 YP_004512581.1 CDS Metme_1663 NC_015572.1 1832139 1833734 D KEGG: mca:MCA0176 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 1832139..1833734 Methylomonas methanica MC09 10671661 YP_004512582.1 CDS Metme_1664 NC_015572.1 1834354 1834581 R hypothetical protein complement(1834354..1834581) Methylomonas methanica MC09 10671662 YP_004512583.1 CDS Metme_1665 NC_015572.1 1834624 1835490 R PFAM: Alpha/beta hydrolase fold-1; KEGG: dat:HRM2_08980 hypothetical protein; alpha/beta hydrolase complement(1834624..1835490) Methylomonas methanica MC09 10671663 YP_004512584.1 CDS Metme_1666 NC_015572.1 1835573 1835824 R hypothetical protein complement(1835573..1835824) Methylomonas methanica MC09 10671664 YP_004512585.1 CDS Metme_1667 NC_015572.1 1835821 1836342 R KEGG: mca:MCA1928 hypothetical protein; hypothetical protein complement(1835821..1836342) Methylomonas methanica MC09 10671665 YP_004512586.1 CDS Metme_1669 NC_015572.1 1836991 1839102 R TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: csa:Csal_3245 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; ATP-dependent DNA helicase RecG complement(1836991..1839102) Methylomonas methanica MC09 10671667 YP_004512587.1 CDS Metme_1670 NC_015572.1 1839137 1839538 R KEGG: alv:Alvin_2537 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(1839137..1839538) Methylomonas methanica MC09 10671668 YP_004512588.1 CDS Metme_1671 NC_015572.1 1839535 1841712 R SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: mca:MCA2023 guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT; (p)ppGpp synthetase I SpoT/RelA complement(1839535..1841712) Methylomonas methanica MC09 10671669 YP_004512589.1 CDS Metme_1672 NC_015572.1 1841721 1841963 R TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: hel:HELO_4404 DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega complement(1841721..1841963) Methylomonas methanica MC09 10671670 YP_004512590.1 CDS Metme_1673 NC_015572.1 1842425 1843900 R PFAM: Peptidase M48, Ste24p; KEGG: mca:MCA1330 hypothetical protein; peptidase M48 Ste24p complement(1842425..1843900) Methylomonas methanica MC09 10671671 YP_004512591.1 CDS Metme_1674 NC_015572.1 1844032 1844421 D KEGG: tgr:Tgr7_2187 sulfur relay protein TusD/DsrE; TIGRFAM: Sulphur relay, TusD/DsrE; PFAM: Sulphur relay, DsrE-like protein; sulfur relay protein TusD/DsrE 1844032..1844421 Methylomonas methanica MC09 10671672 YP_004512592.1 CDS Metme_1675 NC_015572.1 1844428 1844784 D KEGG: hha:Hhal_1954 DsrE family protein; TIGRFAM: Sulphur relay, TusC/DsrF; PFAM: Sulphur relay, DsrE-like protein; sulfur relay protein TusC/DsrF 1844428..1844784 Methylomonas methanica MC09 10671673 YP_004512593.1 CDS Metme_1676 NC_015572.1 1844860 1845441 D KEGG: pap:PSPA7_2172 hypothetical protein; hypothetical protein 1844860..1845441 Methylomonas methanica MC09 10671674 YP_004512594.1 CDS Metme_1677 NC_015572.1 1845474 1846466 D TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; KEGG: mca:MCA1781 BirA bifunctional protein; PFAM: Biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11; Biotin protein ligase, C-terminal; biotin-(acetyl-CoA carboxylase) ligase 1845474..1846466 Methylomonas methanica MC09 10671675 YP_004512595.1 CDS Metme_1678 NC_015572.1 1846463 1847203 D TIGRFAM: Bordetella pertussis Bvg accessory factor; HAMAP: Type III pantothenate kinase; KEGG: noc:Noc_0189 pantothenate kinase; PFAM: Bordetella pertussis Bvg accessory factor; Baf family transcriptional acitvator 1846463..1847203 Methylomonas methanica MC09 10671676 YP_004512596.1 CDS Metme_1679 NC_015572.1 1847200 1847988 D KEGG: mca:MCA1779 hypothetical protein; hypothetical protein 1847200..1847988 Methylomonas methanica MC09 10671677 YP_004512597.1 CDS Metme_1680 NC_015572.1 1848015 1848992 R KEGG: response regulator receiver; PFAM: Signal transduction response regulator, receiver region; Type IV pilus assembly PilZ; SMART: Signal transduction response regulator, receiver region; response regulator receiver modulated PilZ sensor protein complement(1848015..1848992) Methylomonas methanica MC09 10671678 YP_004512598.1 CDS Metme_1681 NC_015572.1 1848992 1850854 R TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; Signal transduction response regulator, receiver region; KEGG: hch:HCH_03588 signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region; PAS/PAC sensor hybrid histidine kinase complement(1848992..1850854) Methylomonas methanica MC09 10671679 YP_004512599.1 CDS Metme_1682 NC_015572.1 1850873 1852732 R KEGG: cbe:Cbei_4814 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; multi-sensor signal transduction histidine kinase complement(1850873..1852732) Methylomonas methanica MC09 10671680 YP_004512600.1 CDS Metme_1683 NC_015572.1 1852967 1854814 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold; KEGG: pca:Pcar_0290 two component sensor histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; PAS/PAC sensor signal transduction histidine kinase 1852967..1854814 Methylomonas methanica MC09 10671681 YP_004512601.1 CDS Metme_1684 NC_015572.1 1854811 1858140 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; Sporulation stage II, protein E C-terminal; PAS fold-3; KEGG: eba:ebA2147 hypothetical protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; Protein phosphatase 2C-related; PAC motif; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1854811..1858140 Methylomonas methanica MC09 10671682 YP_004512602.1 CDS Metme_1685 NC_015572.1 1858186 1858719 R hypothetical protein complement(1858186..1858719) Methylomonas methanica MC09 10671683 YP_004512603.1 CDS Metme_1686 NC_015572.1 1858800 1859702 R KEGG: sus:Acid_5475 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR complement(1858800..1859702) Methylomonas methanica MC09 10671684 YP_004512604.1 CDS Metme_1687 NC_015572.1 1859794 1861059 D KEGG: rbe:RBE_0056 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-32 subunit RpoH 1859794..1861059 Methylomonas methanica MC09 10671685 YP_004512605.1 CDS Metme_1688 NC_015572.1 1861202 1862359 D TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: mca:MCA1981 HflK protein; SMART: Band 7 protein; HflK protein 1861202..1862359 Methylomonas methanica MC09 10671686 YP_004512606.1 CDS Metme_1689 NC_015572.1 1862359 1863219 D TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: mca:MCA1980 HflC protein; SMART: Band 7 protein; HflC protein 1862359..1863219 Methylomonas methanica MC09 10671687 YP_004512607.1 CDS Metme_1690 NC_015572.1 1863237 1865138 D SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: mca:MCA1848 cell division protein FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; ATP-dependent metalloprotease FtsH 1863237..1865138 Methylomonas methanica MC09 10671688 YP_004512608.1 CDS Metme_1691 NC_015572.1 1865212 1865634 D hypothetical protein 1865212..1865634 Methylomonas methanica MC09 10671689 YP_004512609.1 CDS Metme_1692 NC_015572.1 1865663 1866541 D PFAM: BLUF; Protein of unknown function DUF2495; KEGG: cpb:Cphamn1_0997 membrane protein; BLUF domain-containing protein 1865663..1866541 Methylomonas methanica MC09 10671690 YP_004512610.1 CDS Metme_1693 NC_015572.1 1866660 1867142 D KEGG: nmu:Nmul_A1179 hypothetical protein; hypothetical protein 1866660..1867142 Methylomonas methanica MC09 10671691 YP_004512611.1 CDS Metme_1694 NC_015572.1 1867174 1867626 D TIGRFAM: PAS; PFAM: PAS fold; KEGG: nmu:Nmul_A1787 PAS/PAC sensor protein; SMART: PAC motif; PAS; PAS sensor protein 1867174..1867626 Methylomonas methanica MC09 10671692 YP_004512612.1 CDS Metme_1695 NC_015572.1 1867653 1868480 D PFAM: Fatty acid hydroxylase; KEGG: nhl:Nhal_0450 fatty acid hydroxylase; fatty acid hydroxylase 1867653..1868480 Methylomonas methanica MC09 10671693 YP_004512613.1 CDS Metme_1696 NC_015572.1 1868530 1869489 D PFAM: Oxidoreductase, molybdopterin binding; KEGG: hch:HCH_05912 sulfite oxidase subunit YedY; oxidoreductase molybdopterin binding protein 1868530..1869489 Methylomonas methanica MC09 10671694 YP_004512614.1 CDS Metme_1697 NC_015572.1 1869489 1870130 D PFAM: Ferric reductase-like transmembrane component, N-terminal; KEGG: bpy:Bphyt_3607 sulfite oxidase subunit YedZ; ferric reductase 1869489..1870130 Methylomonas methanica MC09 10671695 YP_004512615.1 CDS Metme_1698 NC_015572.1 1870161 1871075 D PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: maq:Maqu_1135 NAD-dependent epimerase/dehydratase; hypothetical protein 1870161..1871075 Methylomonas methanica MC09 10671696 YP_004512616.1 CDS Metme_1699 NC_015572.1 1871082 1871594 D hypothetical protein 1871082..1871594 Methylomonas methanica MC09 10671697 YP_004512617.1 CDS Metme_1700 NC_015572.1 1871601 1872962 D KEGG: mbu:Mbur_2305 deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; deoxyribodipyrimidine photo-lyase 1871601..1872962 Methylomonas methanica MC09 10671698 YP_004512618.1 CDS Metme_1701 NC_015572.1 1872997 1873494 D PFAM: Lipocalin-like; KEGG: son:SO_1691 lipoprotein Blc; lipocalin family protein 1872997..1873494 Methylomonas methanica MC09 10671699 YP_004512619.1 CDS Metme_1702 NC_015572.1 1873501 1874442 D PFAM: Protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: sse:Ssed_2662 hypothetical protein; hypothetical protein 1873501..1874442 Methylomonas methanica MC09 10671700 YP_004512620.1 CDS Metme_1703 NC_015572.1 1874525 1875877 D KEGG: lma:LmjF34.0690 hypothetical protein; hypothetical protein 1874525..1875877 Methylomonas methanica MC09 10671701 YP_004512621.1 CDS Metme_1704 NC_015572.1 1876114 1877397 D PFAM: Integrase, catalytic core, phage; KEGG: dar:Daro_2526 phage integrase; integrase 1876114..1877397 Methylomonas methanica MC09 10671702 YP_004512622.1 CDS Metme_1705 NC_015572.1 1877462 1877749 D PFAM: Protein of unknown function DUF1778; KEGG: bpa:BPP0379 hypothetical protein; hypothetical protein 1877462..1877749 Methylomonas methanica MC09 10671703 YP_004512623.1 CDS Metme_1706 NC_015572.1 1877749 1878234 D PFAM: GCN5-related N-acetyltransferase; KEGG: gca:Galf_1887 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1877749..1878234 Methylomonas methanica MC09 10671704 YP_004512624.1 CDS Metme_1707 NC_015572.1 1878422 1880353 R KEGG: afe:Lferr_0836 hypothetical protein; hypothetical protein complement(1878422..1880353) Methylomonas methanica MC09 10671705 YP_004512625.1 CDS Metme_1708 NC_015572.1 1880392 1882170 R PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: dol:Dole_0822 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein complement(1880392..1882170) Methylomonas methanica MC09 10671706 YP_004512626.1 CDS Metme_1709 NC_015572.1 1882349 1883818 R KEGG: afr:AFE_0684 type I restriction-modification system, M subunit; PFAM: DNA methylase, adenine-specific; adenine-specific DNA methyltransferase complement(1882349..1883818) Methylomonas methanica MC09 10671707 YP_004512627.1 CDS Metme_1710 NC_015572.1 1883940 1884278 R PFAM: Protein of unknown function DUF559; KEGG: rpx:Rpdx1_1651 hypothetical protein; hypothetical protein complement(1883940..1884278) Methylomonas methanica MC09 10671708 YP_004512628.1 CDS Metme_1711 NC_015572.1 1884373 1886718 R PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: afr:AFE_0683 type I restriction-modification system, R subunit; SMART: DEAD-like helicase, N-terminal; Type I site-specific deoxyribonuclease complement(1884373..1886718) Methylomonas methanica MC09 10671709 YP_004512629.1 CDS Metme_1712 NC_015572.1 1887134 1887487 R KEGG: pfl:PFL_2118 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator complement(1887134..1887487) Methylomonas methanica MC09 10671711 YP_004512630.1 CDS Metme_1713 NC_015572.1 1887471 1887767 R SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, alpha subunit; KEGG: cja:CJA_2524 integration host factor, alpha subunit; HAMAP: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein; Integration host factor subunit alpha complement(1887471..1887767) Methylomonas methanica MC09 10671712 YP_004512631.1 CDS Metme_1714 NC_015572.1 1887770 1890145 R TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: mca:MCA0698 phenylalanyl-tRNA synthetase, beta subunit; Phenylalanyl-tRNA synthetase subunit beta complement(1887770..1890145) Methylomonas methanica MC09 10671713 YP_004512632.1 CDS Metme_1715 NC_015572.1 1890160 1891179 R TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: mca:MCA0697 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; Phenylalanyl-tRNA synthetase subunit alpha complement(1890160..1891179) Methylomonas methanica MC09 10671714 YP_004512633.1 CDS Metme_1716 NC_015572.1 1891317 1891679 R TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: mca:MCA0696 50S ribosomal protein L20; PFAM: Ribosomal protein L20; 50S ribosomal protein L20 complement(1891317..1891679) Methylomonas methanica MC09 10671715 YP_004512634.1 CDS Metme_1717 NC_015572.1 1891710 1891907 R TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: mca:MCA0695 ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 complement(1891710..1891907) Methylomonas methanica MC09 10671716 YP_004512635.1 CDS Metme_1718 NC_015572.1 1892053 1892577 R PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; manually curated; TIGRFAM: Translation initiation factor 3; KEGG: pen:PSEEN1964 translation initiation factor IF-3; HAMAP: Translation initiation factor IF-3; translation initiation factor IF-3 complement(1892053..1892577) Methylomonas methanica MC09 10671717 YP_004512636.1 CDS Metme_1719 NC_015572.1 1892600 1894507 R KEGG: mca:MCA0693 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; threonyl-tRNA synthetase complement(1892600..1894507) Methylomonas methanica MC09 10671718 YP_004512637.1 CDS Metme_1720 NC_015572.1 1894712 1898629 R PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich region, CCG; KEGG: mca:MCA1757 oxidoreductase; FAD linked oxidase domain-containing protein complement(1894712..1898629) Methylomonas methanica MC09 10671720 YP_004512638.1 CDS Metme_1721 NC_015572.1 1898788 1899132 R PFAM: FUN14; KEGG: FUN14 family protein; FUN14 family protein complement(1898788..1899132) Methylomonas methanica MC09 10671721 YP_004512639.1 CDS Metme_1722 NC_015572.1 1899233 1899979 R PFAM: Protein of unknown function DUF540; KEGG: mca:MCA1712 sulfate transport protein CysZ; hypothetical protein complement(1899233..1899979) Methylomonas methanica MC09 10671722 YP_004512640.1 CDS Metme_1723 NC_015572.1 1899973 1901010 R PFAM: Initiation factor 2B related; TIGRFAM: translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; HAMAP: Methylthioribose-1-phosphate isomerase; KEGG: mca:MCA1974 initiation factor 2 subunit family protein; methylthioribose-1-phosphate isomerase complement(1899973..1901010) Methylomonas methanica MC09 10671723 YP_004512641.1 CDS Metme_1724 NC_015572.1 1901081 1902394 D HAMAP: 5-methylthioadenosine/S-adenosylhomocysteine deaminase; KEGG: mca:MCA1273 N-ethylammeline chlorohydrolase; PFAM: Amidohydrolase 1; 5-methylthioadenosine/S-adenosylhomocysteine deaminase 1901081..1902394 Methylomonas methanica MC09 10671724 YP_004512642.1 CDS Metme_1725 NC_015572.1 1902621 1903040 D KEGG: pau:PA14_12640 hypothetical protein; hypothetical protein 1902621..1903040 Methylomonas methanica MC09 10671725 YP_004512643.1 CDS Metme_1726 NC_015572.1 1903306 1903572 D hypothetical protein 1903306..1903572 Methylomonas methanica MC09 10671726 YP_004512644.1 CDS Metme_1727 NC_015572.1 1903644 1904063 D KEGG: pmy:Pmen_3078 hypothetical protein; hypothetical protein 1903644..1904063 Methylomonas methanica MC09 10671727 YP_004512645.1 CDS Metme_1728 NC_015572.1 1904144 1904476 D PFAM: Transposase IS3/IS911; KEGG: azl:AZL_f00580 transposase; transposase IS3/IS911 family protein 1904144..1904476 Methylomonas methanica MC09 10671728 YP_004512646.1 CDS Metme_1729 NC_015572.1 1904473 1905375 D PFAM: Integrase, catalytic core; KEGG: aav:Aave_2937 integrase catalytic subunit; integrase catalytic subunit 1904473..1905375 Methylomonas methanica MC09 10671729 YP_004512647.1 CDS Metme_1730 NC_015572.1 1905457 1905756 D PFAM: Barstar (barnase inhibitor); KEGG: barstar (barnase inhibitor); barnase inhibitor 1905457..1905756 Methylomonas methanica MC09 10671730 YP_004512648.1 CDS Metme_1731 NC_015572.1 1906429 1906839 D hypothetical protein 1906429..1906839 Methylomonas methanica MC09 10671731 YP_004512649.1 CDS Metme_1732 NC_015572.1 1907123 1907596 R KEGG: cyt:cce_0035 hypothetical protein; hypothetical protein complement(1907123..1907596) Methylomonas methanica MC09 10671732 YP_004512650.1 CDS Metme_1733 NC_015572.1 1907857 1908522 R KEGG: rmr:Rmar_2437 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator complement(1907857..1908522) Methylomonas methanica MC09 10671733 YP_004512651.1 CDS Metme_1734 NC_015572.1 1908570 1910525 D KEGG: xau:Xaut_0992 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 1908570..1910525 Methylomonas methanica MC09 10671734 YP_004512652.1 CDS Metme_1735 NC_015572.1 1910628 1912169 D KEGG: cyt:cce_0035 hypothetical protein; hypothetical protein 1910628..1912169 Methylomonas methanica MC09 10671735 YP_004512653.1 CDS Metme_1736 NC_015572.1 1912370 1914538 R PFAM: DNA helicase, UvrD/REP type; KEGG: mca:MCA1037 DNA-dependent helicase II; UvrD/REP helicase complement(1912370..1914538) Methylomonas methanica MC09 10671736 YP_004512654.1 CDS Metme_1737 NC_015572.1 1914645 1914911 D KEGG: mca:MCA1038 hypothetical protein; hypothetical protein 1914645..1914911 Methylomonas methanica MC09 10671737 YP_004512655.1 CDS Metme_1738 NC_015572.1 1914963 1915415 R PFAM: FxsA cytoplasmic membrane protein; KEGG: tgr:Tgr7_0437 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein complement(1914963..1915415) Methylomonas methanica MC09 10671738 YP_004512656.1 CDS Metme_1739 NC_015572.1 1915554 1915871 D PFAM: Divalent ion tolerance protein, CutA1; KEGG: noc:Noc_1056 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 1915554..1915871 Methylomonas methanica MC09 10671739 YP_004512657.1 CDS Metme_1740 NC_015572.1 1915853 1918069 D HAMAP: Thiol:disulfide interchange protein dsbD; KEGG: mca:MCA1041 DsbD family thiol:disulfide interchange protein; PFAM: Cytochrome c assembly protein, transmembrane region; Thioredoxin domain; thiol:disulfide interchange protein DsbD 1915853..1918069 Methylomonas methanica MC09 10671740 YP_004512658.1 CDS Metme_1741 NC_015572.1 1918066 1918593 D PFAM: Redoxin; KEGG: nmu:Nmul_A2682 thioredoxin; redoxin domain-containing protein 1918066..1918593 Methylomonas methanica MC09 10671741 YP_004512659.1 CDS Metme_1742 NC_015572.1 1918694 1919155 D PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: pfl:PFL_0673 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase 1918694..1919155 Methylomonas methanica MC09 10671742 YP_004512660.1 CDS Metme_1743 NC_015572.1 1919145 1919588 D KEGG: vpa:VP2880 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1919145..1919588 Methylomonas methanica MC09 10671743 YP_004512661.1 CDS Metme_1744 NC_015572.1 1919606 1920949 D TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: mca:MCA1046 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; acetyl-CoA carboxylase, biotin carboxylase 1919606..1920949 Methylomonas methanica MC09 10671744 YP_004512662.1 CDS Metme_1745 NC_015572.1 1921009 1921893 D TIGRFAM: Ribosomal protein L11 methyltransferase; HAMAP: Ribosomal protein L11 methyltransferase; KEGG: mca:MCA1047 ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 1921009..1921893 Methylomonas methanica MC09 10671745 YP_004512663.1 CDS Metme_1746 NC_015572.1 1921896 1922534 D KEGG: mca:MCA1048 hypothetical protein; hypothetical protein 1921896..1922534 Methylomonas methanica MC09 10671746 YP_004512664.1 CDS Metme_1747 NC_015572.1 1922538 1923734 D KEGG: mca:MCA1049 hypothetical protein; PFAM: RNA cap guanine-N2 methyltransferase; SMART: Pseudouridine synthase/archaeosine transglycosylase; RNA cap guanine-N2 methyltransferase 1922538..1923734 Methylomonas methanica MC09 10671747 YP_004512665.1 CDS Metme_1748 NC_015572.1 1923919 1924473 D KEGG: mca:MCA2501 hypothetical protein; hypothetical protein 1923919..1924473 Methylomonas methanica MC09 10671748 YP_004512666.1 CDS Metme_1749 NC_015572.1 1924656 1926029 D KEGG: nhl:Nhal_0830 outer membrane autotransporter barrel domain protein; TIGRFAM: Outer membrane autotransporter barrel; PFAM: Autotransporter beta-domain; outer membrane autotransporter barrel domain-containing protein 1924656..1926029 Methylomonas methanica MC09 10671749 YP_004512667.1 CDS Metme_1750 NC_015572.1 1926081 1926629 R hypothetical protein complement(1926081..1926629) Methylomonas methanica MC09 10671750 YP_004512668.1 CDS Metme_1751 NC_015572.1 1926736 1927128 R KEGG: mca:MCA1947 hypothetical protein; hypothetical protein complement(1926736..1927128) Methylomonas methanica MC09 10671751 YP_004512669.1 CDS Metme_1752 NC_015572.1 1927156 1927626 R KEGG: mca:MCA1946 lipoprotein; lipoprotein complement(1927156..1927626) Methylomonas methanica MC09 10671752 YP_004512670.1 CDS Metme_1753 NC_015572.1 1927644 1928252 D KEGG: mca:MCA1945 molybdopterin-guanine dinucleotide biosynthesis protein A; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 1927644..1928252 Methylomonas methanica MC09 10671753 YP_004512671.1 CDS Metme_1754 NC_015572.1 1928288 1929190 D KEGG: nmu:Nmul_A2420 hypothetical protein; hypothetical protein 1928288..1929190 Methylomonas methanica MC09 10671754 YP_004512672.1 CDS Metme_1755 NC_015572.1 1929198 1931516 R KEGG: nhl:Nhal_1351 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: Hydrogenase maturation factor, HypF-type; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type; (NiFe) hydrogenase maturation protein HypF complement(1929198..1931516) Methylomonas methanica MC09 10671755 YP_004512673.1 CDS Metme_1756 NC_015572.1 1931516 1932559 R KEGG: alv:Alvin_2797 hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; hydrogenase expression/formation protein HypE complement(1931516..1932559) Methylomonas methanica MC09 10671756 YP_004512674.1 CDS Metme_1757 NC_015572.1 1932651 1932884 D PFAM: Transcription regulator AbrB/SpoV, predicted; KEGG: neu:NE1374 hypothetical protein; transcriptional regulator/antitoxin MazE 1932651..1932884 Methylomonas methanica MC09 10671757 YP_004512675.1 CDS Metme_1758 NC_015572.1 1932871 1933284 D PFAM: PilT protein, N-terminal; KEGG: alv:Alvin_0248 PilT protein domain-containing protein; twitching motility protein PilT 1932871..1933284 Methylomonas methanica MC09 10671758 YP_004512676.1 CDS Metme_1759 NC_015572.1 1933259 1934395 R KEGG: slt:Slit_2421 hydrogenase expression/formation protein HypD; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD complement(1933259..1934395) Methylomonas methanica MC09 10671759 YP_004512677.1 CDS Metme_1760 NC_015572.1 1934392 1934625 R KEGG: app:CAP2UW1_0733 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; hydrogenase assembly chaperone HypC/HupF complement(1934392..1934625) Methylomonas methanica MC09 10671760 YP_004512678.1 CDS Metme_1761 NC_015572.1 1935005 1935583 R hypothetical protein complement(1935005..1935583) Methylomonas methanica MC09 10671761 YP_004512679.1 CDS Metme_1762 NC_015572.1 1936336 1936533 R KEGG: pph:Ppha_2865 hypothetical protein; hypothetical protein complement(1936336..1936533) Methylomonas methanica MC09 10671762 YP_004512680.1 CDS Metme_1763 NC_015572.1 1936530 1936967 R KEGG: pph:Ppha_0757 hypothetical protein; hypothetical protein complement(1936530..1936967) Methylomonas methanica MC09 10671763 YP_004512681.1 CDS Metme_1764 NC_015572.1 1936988 1937815 R KEGG: rpe:RPE_1242 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; hydrogenase nickel incorporation protein HypB complement(1936988..1937815) Methylomonas methanica MC09 10671764 YP_004512682.1 CDS Metme_1765 NC_015572.1 1937815 1938156 R TIGRFAM: Hydrogenase nickel incorporation protein HypA/HybF; HAMAP: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: slt:Slit_2425 hydrogenase nickel insertion protein HypA; PFAM: Hydrogenase nickel incorporation protein HypA/HybF; hydrogenase nickel incorporation protein HypA complement(1937815..1938156) Methylomonas methanica MC09 10671765 YP_004512683.1 CDS Metme_1766 NC_015572.1 1938149 1939336 R KEGG: mgm:Mmc1_2497 Ni,Fe-hydrogenase I large subunit; Ni,Fe-hydrogenase I large subunit complement(1938149..1939336) Methylomonas methanica MC09 10671766 YP_004512684.1 CDS Metme_1767 NC_015572.1 1939337 1939798 R KEGG: azl:AZL_c01950 rubredoxin; rubredoxin complement(1939337..1939798) Methylomonas methanica MC09 10671767 YP_004512685.1 CDS Metme_1768 NC_015572.1 1939801 1940022 R PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bid:Bind_1157 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(1939801..1940022) Methylomonas methanica MC09 10671768 YP_004512686.1 CDS Metme_1769 NC_015572.1 1940019 1940867 R PFAM: HupH hydrogenase expression protein, C-terminal conserved region; KEGG: rva:Rvan_0971 HupH hydrogenase expression protein; HupH hydrogenase expression protein complement(1940019..1940867) Methylomonas methanica MC09 10671769 YP_004512687.1 CDS Metme_1770 NC_015572.1 1941029 1941565 D KEGG: dal:Dalk_5111 hypothetical protein; hypothetical protein 1941029..1941565 Methylomonas methanica MC09 10671770 YP_004512688.1 CDS Metme_1771 NC_015572.1 1941699 1942040 R KEGG: eba:ebA4007 CcdB-like toxin protein; CcdB-like toxin protein complement(1941699..1942040) Methylomonas methanica MC09 10671771 YP_004512689.1 CDS Metme_1772 NC_015572.1 1942018 1942257 R PFAM: Post-segregation antitoxin CcdA; KEGG: neu:NE1077 hypothetical protein; Post-segregation antitoxin CcdA complement(1942018..1942257) Methylomonas methanica MC09 10671772 YP_004512690.1 CDS Metme_1773 NC_015572.1 1942452 1942871 R PFAM: Hydrogenase-1 expression HyaE; KEGG: rva:Rvan_0970 hydrogenase-1 expression HyaE; hydrogenase-1 expression HyaE complement(1942452..1942871) Methylomonas methanica MC09 10671773 YP_004512691.1 CDS Metme_1774 NC_015572.1 1942868 1943164 R KEGG: rva:Rvan_0969 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; hydrogenase assembly chaperone HypC/HupF complement(1942868..1943164) Methylomonas methanica MC09 10671774 YP_004512692.1 CDS Metme_1775 NC_015572.1 1943164 1943850 R KEGG: rva:Rvan_0968 hydrogenase expression/formation protein; TIGRFAM: Peptidase A31, hydrogenase expression/formation protein; Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein; hydrogenase expression/formation protein complement(1943164..1943850) Methylomonas methanica MC09 10671775 YP_004512693.1 CDS Metme_1776 NC_015572.1 1943940 1944635 R TIGRFAM: Nickel-dependent hydrogenase b-type cytochrome subunit; KEGG: tin:Tint_3075 Ni/Fe-hydrogenase, b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit complement(1943940..1944635) Methylomonas methanica MC09 10671776 YP_004512694.1 CDS Metme_1777 NC_015572.1 1944632 1944838 R hypothetical protein complement(1944632..1944838) Methylomonas methanica MC09 10671777 YP_004512695.1 CDS Metme_1778 NC_015572.1 1944968 1946764 R KEGG: rva:Rvan_0965 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; cytochrome-c3 hydrogenase complement(1944968..1946764) Methylomonas methanica MC09 10671778 YP_004512696.1 CDS Metme_1779 NC_015572.1 1946764 1947855 R TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; KEGG: reh:PHG001 membrane-bound [NiFe] hydrogenase small subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; hydrogenase (NiFe) small subunit HydA complement(1946764..1947855) Methylomonas methanica MC09 10671779 YP_004512697.1 CDS Metme_1780 NC_015572.1 1948311 1949285 R PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: tbd:Tbd_2534 CobW protein; cobalamin synthesis protein P47K complement(1948311..1949285) Methylomonas methanica MC09 10671780 YP_004512698.1 CDS Metme_1781 NC_015572.1 1949297 1952131 R KEGG: cte:CT1526 Rab family protein; PFAM: MIRO-like; Toll-Interleukin receptor; SMART: Ras small GTPase, Rab type; Toll-Interleukin receptor; Miro domain-containing protein complement(1949297..1952131) Methylomonas methanica MC09 10671781 YP_004512699.1 CDS Metme_1782 NC_015572.1 1952700 1954013 R KEGG: pat:Patl_1501 peptidase-like; hypothetical protein complement(1952700..1954013) Methylomonas methanica MC09 10671782 YP_004512700.1 CDS Metme_1783 NC_015572.1 1954068 1956299 R PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: mca:MCA2321 TonB-dependent receptor; TonB-dependent receptor complement(1954068..1956299) Methylomonas methanica MC09 10671783 YP_004512701.1 CDS Metme_1784 NC_015572.1 1956382 1957089 R KEGG: mfa:Mfla_0709 hypothetical protein; hypothetical protein complement(1956382..1957089) Methylomonas methanica MC09 10671784 YP_004512702.1 CDS Metme_1785 NC_015572.1 1957176 1957892 R PFAM: Protein of unknown function DUF1826; KEGG: mca:MCA2320 hypothetical protein; hypothetical protein complement(1957176..1957892) Methylomonas methanica MC09 10671785 YP_004512703.1 CDS Metme_1786 NC_015572.1 1957904 1958554 R PFAM: Zinc/iron permease; KEGG: dly:Dehly_0476 zinc/iron permease; zinc/iron permease complement(1957904..1958554) Methylomonas methanica MC09 10671786 YP_004512704.1 CDS Metme_1787 NC_015572.1 1958551 1958796 R hypothetical protein complement(1958551..1958796) Methylomonas methanica MC09 10671787 YP_004512705.1 CDS Metme_1788 NC_015572.1 1958789 1960012 R PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: mmw:Mmwyl1_1446 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(1958789..1960012) Methylomonas methanica MC09 10671788 YP_004512706.1 CDS Metme_1789 NC_015572.1 1960093 1962132 R PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: mca:MCA2321 TonB-dependent receptor; TonB-dependent receptor complement(1960093..1962132) Methylomonas methanica MC09 10671789 YP_004512707.1 CDS Metme_1790 NC_015572.1 1962220 1962711 R KEGG: mca:MCA2322 transctiptional regulator; transctiptional regulator complement(1962220..1962711) Methylomonas methanica MC09 10671790 YP_004512708.1 CDS Metme_1791 NC_015572.1 1963015 1963245 R KEGG: hch:HCH_04776 hypothetical protein; hypothetical protein complement(1963015..1963245) Methylomonas methanica MC09 10671791 YP_004512709.1 CDS Metme_1792 NC_015572.1 1963293 1964168 R KEGG: mca:MCA1383 heat shock protein HtpX; HAMAP: protease htpX; PFAM: Peptidase M48, Ste24p; Peptidase M48B, HtpX peptidase N-terminal; protease htpX complement(1963293..1964168) Methylomonas methanica MC09 10671792 YP_004512710.1 CDS Metme_1793 NC_015572.1 1964278 1965387 D KEGG: mba:Mbar_A2771 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase 1964278..1965387 Methylomonas methanica MC09 10671793 YP_004512711.1 CDS Metme_1794 NC_015572.1 1965384 1965989 D TIGRFAM: Nucleoside diphosphate pyrophosphatase; KEGG: mca:MCA1477 hypothetical protein; PFAM: NUDIX hydrolase domain; nucleoside diphosphate pyrophosphatase 1965384..1965989 Methylomonas methanica MC09 10671794 YP_004512712.1 CDS Metme_1795 NC_015572.1 1966098 1966742 D KEGG: nmu:Nmul_A2674 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1966098..1966742 Methylomonas methanica MC09 10671795 YP_004512713.1 CDS Metme_1796 NC_015572.1 1966830 1967912 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(1966830..1967912) Methylomonas methanica MC09 10671796 YP_004512714.1 CDS Metme_1797 NC_015572.1 1967909 1968409 R KEGG: pna:Pnap_1740 transposase; transposase complement(1967909..1968409) Methylomonas methanica MC09 10671797 YP_004512715.1 CDS Metme_1798 NC_015572.1 1968946 1970307 D PFAM: Divalent ion symporter; KEGG: mca:MCA2058 transporter; citrate transporter 1968946..1970307 Methylomonas methanica MC09 10671798 YP_004512716.1 CDS Metme_1799 NC_015572.1 1970453 1972363 R KEGG: tcx:Tcr_0014 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00341; PFAM: Protein of unknown function DUF389; hypothetical protein complement(1970453..1972363) Methylomonas methanica MC09 10671799 YP_004512717.1 CDS Metme_1800 NC_015572.1 1973082 1973663 D KEGG: rpd:RPD_2508 hypothetical protein; hypothetical protein 1973082..1973663 Methylomonas methanica MC09 10671800 YP_004512718.1 CDS Metme_1801 NC_015572.1 1974027 1975004 R PFAM: Conserved hypothetical protein CHP00730; KEGG: sun:SUN_1207 decarboxylase; hypothetical protein complement(1974027..1975004) Methylomonas methanica MC09 10671801 YP_004512719.1 CDS Metme_1802 NC_015572.1 1975096 1975968 D hypothetical protein 1975096..1975968 Methylomonas methanica MC09 10671802 YP_004512720.1 CDS Metme_1803 NC_015572.1 1976168 1976773 D PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: hch:HCH_03679 hypothetical protein; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1976168..1976773 Methylomonas methanica MC09 10671803 YP_004512721.1 CDS Metme_1804 NC_015572.1 1976915 1977259 D hypothetical protein 1976915..1977259 Methylomonas methanica MC09 10671804 YP_004512722.1 CDS Metme_1805 NC_015572.1 1977893 1978294 D manually curated; KEGG: mfa:Mfla_2597 hypothetical protein; hypothetical protein 1977893..1978294 Methylomonas methanica MC09 10671805 YP_004512723.1 CDS Metme_1806 NC_015572.1 1978306 1978821 D KEGG: reh:H16_A0552 hypothetical protein; hypothetical protein 1978306..1978821 Methylomonas methanica MC09 10671806 YP_004512724.1 CDS Metme_1807 NC_015572.1 1979058 1980647 D KEGG: ant:Arnit_2849 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 1979058..1980647 Methylomonas methanica MC09 10671807 YP_004512725.1 CDS Metme_1808 NC_015572.1 1980684 1981874 D KEGG: lpf:lpl2552 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein; hypothetical protein 1980684..1981874 Methylomonas methanica MC09 10671808 YP_004512726.1 CDS Metme_1809 NC_015572.1 1982227 1982814 D PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nmu:Nmul_A1967 TetR family transcriptional regulator; TetR family transcriptional regulator 1982227..1982814 Methylomonas methanica MC09 10671809 YP_004512727.1 CDS Metme_1810 NC_015572.1 1982925 1983320 D KEGG: alv:Alvin_0868 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 1982925..1983320 Methylomonas methanica MC09 10671810 YP_004512728.1 CDS Metme_1811 NC_015572.1 1983443 1983727 D KEGG: dae:Dtox_4336 hypothetical protein; hypothetical protein 1983443..1983727 Methylomonas methanica MC09 10671811 YP_004512729.1 CDS Metme_1812 NC_015572.1 1983733 1983912 D PFAM: Ferredoxin soy-like; KEGG: pdi:BDI_3075 hypothetical protein; hypothetical protein 1983733..1983912 Methylomonas methanica MC09 10671812 YP_004512730.1 CDS Metme_1813 NC_015572.1 1984011 1985210 D KEGG: axy:AXYL_04215 pyridine nucleotide-disulfide oxidoreductase 5; pyridine nucleotide-disulfide oxidoreductase 5 1984011..1985210 Methylomonas methanica MC09 10671813 YP_004512731.1 CDS Metme_1814 NC_015572.1 1985228 1985641 D PFAM: Protein of unknown function DUF1641; KEGG: ctt:CtCNB1_1682 hypothetical protein; hypothetical protein 1985228..1985641 Methylomonas methanica MC09 10671814 YP_004512732.1 CDS Metme_1815 NC_015572.1 1985803 1986975 D KEGG: nwa:Nwat_1635 hypothetical protein; hypothetical protein 1985803..1986975 Methylomonas methanica MC09 10671815 YP_004512733.1 CDS Metme_1817 NC_015572.1 1987437 1988066 R KEGG: eli:ELI_06530 LexA repressor; TIGRFAM: Peptidase S24, LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; LexA DNA-binding region; SOS-response transcriptional repressor, LexA complement(1987437..1988066) Methylomonas methanica MC09 10671817 YP_004512734.1 CDS Metme_1818 NC_015572.1 1988163 1991609 R TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription-repair-coupling factor; Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: mca:MCA1864 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; transcription-repair coupling factor complement(1988163..1991609) Methylomonas methanica MC09 10671818 YP_004512735.1 CDS Metme_1819 NC_015572.1 1991718 1992455 R PFAM: YcgR; KEGG: app:CAP2UW1_0922 YcgR family protein; hypothetical protein complement(1991718..1992455) Methylomonas methanica MC09 10671819 YP_004512736.1 CDS Metme_1820 NC_015572.1 1992541 1992861 D PFAM: Small multidrug resistance protein; KEGG: paa:Paes_0600 small multidrug resistance protein; small multidrug resistance protein 1992541..1992861 Methylomonas methanica MC09 10671820 YP_004512737.1 CDS Metme_1821 NC_015572.1 1992861 1993154 D TIGRFAM: Sulphur relay, TusB/DsrH; KEGG: hch:HCH_02546 hypothetical protein; sulfur relay protein TusB/DsrH 1992861..1993154 Methylomonas methanica MC09 10671821 YP_004512738.1 CDS Metme_1822 NC_015572.1 1993145 1993477 D KEGG: hiq:CGSHiGG_00525 dissimilatory sulfite reductase, desulfoviridin, gamma subunit; TIGRFAM: DsrC-like protein; PFAM: DsrC-like protein; TusE/DsrC/DsvC family sulfur relay protein 1993145..1993477 Methylomonas methanica MC09 10671822 YP_004512739.1 CDS Metme_1823 NC_015572.1 1993507 1994817 D SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: mca:MCA0082 MiaB-like tRNA modifying enzyme YliG; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; 30S ribosomal protein S12 methylthiotransferase 1993507..1994817 Methylomonas methanica MC09 10671823 YP_004512740.1 CDS Metme_1824 NC_015572.1 1994894 1995103 R KEGG: tcx:Tcr_1862 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(1994894..1995103) Methylomonas methanica MC09 10671824 YP_004512741.1 CDS Metme_1825 NC_015572.1 1995956 1996165 R KEGG: tcx:Tcr_1862 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(1995956..1996165) Methylomonas methanica MC09 10671825 YP_004512742.1 CDS Metme_1826 NC_015572.1 1996421 1998133 R KEGG: acr:Acry_3383 thiamine pyrophosphate binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate dehydrogenase (cytochrome) complement(1996421..1998133) Methylomonas methanica MC09 10671826 YP_004512743.1 CDS Metme_1828 NC_015572.1 2000351 2001715 D KEGG: eba:p1B277 transposase; transposase 2000351..2001715 Methylomonas methanica MC09 10671828 YP_004512744.1 CDS Metme_1829 NC_015572.1 2002271 2004625 D PFAM: Fatty acid cis-trans isomerase; KEGG: mca:MCA1806 fatty acid cis/trans isomerase; fatty acid cis/trans isomerase 2002271..2004625 Methylomonas methanica MC09 10671829 YP_004512745.1 CDS Metme_1830 NC_015572.1 2004849 2006936 R PFAM: Cation/H+ exchanger; KEGG: sua:Saut_2027 sodium/proton antiporter, CPA1 family; sodium/hydrogen exchanger complement(2004849..2006936) Methylomonas methanica MC09 10671830 YP_004512746.1 CDS Metme_1831 NC_015572.1 2007101 2010769 R PFAM: Oxidoreductase FAD/NAD(P)-binding; KEGG: mca:MCA0335 hypothetical protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(2007101..2010769) Methylomonas methanica MC09 10671831 YP_004512747.1 CDS Metme_1832 NC_015572.1 2010818 2011744 R KEGG: noc:Noc_2349 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF complement(2010818..2011744) Methylomonas methanica MC09 10671832 YP_004512748.1 CDS Metme_1833 NC_015572.1 2011833 2013290 R KEGG: mca:MCA2041 TrkH family potassium uptake protein; TIGRFAM: Potassium uptake protein TrkH; PFAM: Cation transporter; TrkH family potassium uptake protein complement(2011833..2013290) Methylomonas methanica MC09 10671833 YP_004512749.1 CDS Metme_1834 NC_015572.1 2013530 2014051 D KEGG: mca:MCA2985 PAP2 superfamily protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein 2013530..2014051 Methylomonas methanica MC09 10671834 YP_004512750.1 CDS Metme_1835 NC_015572.1 2014051 2015112 D TIGRFAM: Conserved hypothetical protein CHP00661; KEGG: mca:MCA2984 hypothetical protein; hypothetical protein 2014051..2015112 Methylomonas methanica MC09 10671835 YP_004512751.1 CDS Metme_1836 NC_015572.1 2015128 2016162 R KEGG: mca:MCA0080 hypothetical protein; hypothetical protein complement(2015128..2016162) Methylomonas methanica MC09 10671836 YP_004512752.1 CDS Metme_1837 NC_015572.1 2016249 2016632 D TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: pmy:Pmen_0332 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein; Glycine cleavage system H protein 2016249..2016632 Methylomonas methanica MC09 10671837 YP_004512753.1 CDS Metme_1838 NC_015572.1 2016643 2017002 D PFAM: Diacylglycerol kinase, prokaryotic; KEGG: tmz:Tmz1t_1798 diacylglycerol kinase; diacylglycerol kinase 2016643..2017002 Methylomonas methanica MC09 10671838 YP_004512754.1 CDS Metme_1839 NC_015572.1 2017114 2018046 D KEGG: tgr:Tgr7_0173 PfkB domain protein; PFAM: Carbohydrate/purine kinase; adenosine kinase 2017114..2018046 Methylomonas methanica MC09 10671839 YP_004512755.1 CDS Metme_1840 NC_015572.1 2018043 2018861 D KEGG: mca:MCA0046 MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, catalytic core; nucleotide pyrophosphohydrolase 2018043..2018861 Methylomonas methanica MC09 10671840 YP_004512756.1 CDS Metme_1841 NC_015572.1 2018858 2019271 D hypothetical protein 2018858..2019271 Methylomonas methanica MC09 10671841 YP_004512757.1 CDS Metme_1842 NC_015572.1 2019903 2020031 D hypothetical protein 2019903..2020031 Methylomonas methanica MC09 10671842 YP_004512758.1 CDS Metme_1843 NC_015572.1 2020047 2020505 D KEGG: saz:Sama_2843 hypothetical protein; hypothetical protein 2020047..2020505 Methylomonas methanica MC09 10671843 YP_004512759.1 CDS Metme_1844 NC_015572.1 2020516 2020902 D manually curated; KEGG: sna:Snas_6402 hypothetical protein; hypothetical protein 2020516..2020902 Methylomonas methanica MC09 10671844 YP_004512760.1 CDS Metme_1845 NC_015572.1 2021046 2021357 D manually curated; hypothetical protein 2021046..2021357 Methylomonas methanica MC09 10671845 YP_004512761.1 CDS Metme_1846 NC_015572.1 2021332 2021448 D manually curated; hypothetical protein 2021332..2021448 Methylomonas methanica MC09 10671846 YP_004512762.1 CDS Metme_1847 NC_015572.1 2021868 2022506 D KEGG: cpc:Cpar_0475 multiple antibiotic resistance (MarC)-related protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related; multiple antibiotic resistance (MarC)-like protein 2021868..2022506 Methylomonas methanica MC09 10671847 YP_004512763.1 CDS Metme_1848 NC_015572.1 2023024 2023431 R KEGG: pat:Patl_0614 hypothetical protein; hypothetical protein complement(2023024..2023431) Methylomonas methanica MC09 10671848 YP_004512764.1 CDS Metme_1849 NC_015572.1 2023907 2024113 D KEGG: fjo:Fjoh_4853 hypothetical protein; hypothetical protein 2023907..2024113 Methylomonas methanica MC09 10671849 YP_004512765.1 CDS Metme_1850 NC_015572.1 2024188 2025510 R KEGG: rpf:Rpic12D_3163 hypothetical protein; hypothetical protein complement(2024188..2025510) Methylomonas methanica MC09 10671850 YP_004512766.1 CDS Metme_1851 NC_015572.1 2025550 2026041 R PFAM: Glycosyl transferase, family 28, C-terminal; KEGG: hch:HCH_03417 hypothetical protein; Glycosyltransferase 28 domain-containing protein complement(2025550..2026041) Methylomonas methanica MC09 10671851 YP_004512767.1 CDS Metme_1852 NC_015572.1 2026038 2026493 R PFAM: Oligosaccharide biosynthesis protein Alg14 like; KEGG: hch:HCH_03418 glycosyltransferase; oligosaccharide biosynthesis protein Alg14-like protein complement(2026038..2026493) Methylomonas methanica MC09 10671852 YP_004512768.1 CDS Metme_1853 NC_015572.1 2026544 2027851 R KEGG: mpt:Mpe_A0729 hypothetical protein; hypothetical protein complement(2026544..2027851) Methylomonas methanica MC09 10671853 YP_004512769.1 CDS Metme_1854 NC_015572.1 2027872 2029311 R PFAM: Polysaccharide biosynthesis protein; KEGG: mpt:Mpe_A0730 polysaccharide transport protein; polysaccharide biosynthesis protein complement(2027872..2029311) Methylomonas methanica MC09 10671854 YP_004512770.1 CDS Metme_1855 NC_015572.1 2029308 2030552 R KEGG: acr:Acry_2668 hypothetical protein; hypothetical protein complement(2029308..2030552) Methylomonas methanica MC09 10671855 YP_004512771.1 CDS Metme_1856 NC_015572.1 2030549 2031601 R KEGG: pla:Plav_1708 hypothetical protein; hypothetical protein complement(2030549..2031601) Methylomonas methanica MC09 10671856 YP_004512772.1 CDS Metme_1857 NC_015572.1 2031606 2032490 R KEGG: pha:PSHAa1787 glycosyl transferase; glycosyl transferase family protein complement(2031606..2032490) Methylomonas methanica MC09 10671857 YP_004512773.1 CDS Metme_1858 NC_015572.1 2032496 2032969 R PFAM: Bacterial transferase hexapeptide repeat; KEGG: rle:RL3644 polysaccharide acetyltransferase; transferase hexapeptide repeat containing protein complement(2032496..2032969) Methylomonas methanica MC09 10671858 YP_004512774.1 CDS Metme_1859 NC_015572.1 2032971 2034191 R PFAM: O-antigen ligase-related; KEGG: ppy:PPE_01126 hypothetical protein; O-antigen polymerase complement(2032971..2034191) Methylomonas methanica MC09 10671859 YP_004512775.1 CDS Metme_1860 NC_015572.1 2034243 2035526 R KEGG: tbd:Tbd_1796 hypothetical protein; hypothetical protein complement(2034243..2035526) Methylomonas methanica MC09 10671860 YP_004512776.1 CDS Metme_1861 NC_015572.1 2035535 2036383 R KEGG: mmb:Mmol_1794 chain length determinant protein tyrosine kinase EpsG; TIGRFAM: Tyrosine-protein kinase, chain length determinant protein EpsG; Exopolysaccharide synthesis protein; chain length determinant protein tyrosine kinase EpsG complement(2035535..2036383) Methylomonas methanica MC09 10671861 YP_004512777.1 CDS Metme_1862 NC_015572.1 2036402 2037847 R KEGG: mfa:Mfla_2025 lipopolysaccharide biosynthesis; TIGRFAM: Chain length determinant protein EpsF; PFAM: Lipopolysaccharide biosynthesis; chain length determinant protein EpsF complement(2036402..2037847) Methylomonas methanica MC09 10671862 YP_004512778.1 CDS Metme_1863 NC_015572.1 2037895 2038707 R PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: har:HEAR0714 polysaccharide export protein; polysaccharide export protein complement(2037895..2038707) Methylomonas methanica MC09 10671863 YP_004512779.1 CDS Metme_1864 NC_015572.1 2038889 2040313 R KEGG: pat:Patl_1070 sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; UDP-phosphate glucose phosphotransferase complement(2038889..2040313) Methylomonas methanica MC09 10671864 YP_004512780.1 CDS Metme_1865 NC_015572.1 2040660 2041310 D PFAM: SNARE associated Golgi protein; KEGG: tmz:Tmz1t_1822 SNARE associated Golgi protein; hypothetical protein 2040660..2041310 Methylomonas methanica MC09 10671865 YP_004512781.1 CDS Metme_1866 NC_015572.1 2041400 2043040 D PFAM: Sulphate transporter; KEGG: mca:MCA2472 sulfate transporter family protein; sulfate transporter 2041400..2043040 Methylomonas methanica MC09 10671866 YP_004512782.1 CDS Metme_1867 NC_015572.1 2043151 2043630 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: alv:Alvin_2801 peroxiredoxin; alkyl hydroperoxide reductase complement(2043151..2043630) Methylomonas methanica MC09 10671867 YP_004512783.1 CDS Metme_1868 NC_015572.1 2043899 2045101 D KEGG: gpb:HDN1F_29390 HlyD family secretion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2043899..2045101 Methylomonas methanica MC09 10671868 YP_004512784.1 CDS Metme_1869 NC_015572.1 2045098 2047053 D PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; KEGG: pla:Plav_1100 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 2045098..2047053 Methylomonas methanica MC09 10671869 YP_004512785.1 CDS Metme_1870 NC_015572.1 2047050 2048402 D KEGG: pla:Plav_1099 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 2047050..2048402 Methylomonas methanica MC09 10671870 YP_004512786.1 CDS Metme_1871 NC_015572.1 2048412 2049512 R KEGG: ana:alr0568 hypothetical protein; hypothetical protein complement(2048412..2049512) Methylomonas methanica MC09 10671871 YP_004512787.1 CDS Metme_1872 NC_015572.1 2049512 2050000 R KEGG: nwa:Nwat_2778 signal peptide protein; hypothetical protein complement(2049512..2050000) Methylomonas methanica MC09 10671872 YP_004512788.1 CDS Metme_1873 NC_015572.1 2050133 2051887 R KEGG: tgr:Tgr7_1963 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer complement(2050133..2051887) Methylomonas methanica MC09 10671873 YP_004512789.1 CDS Metme_1874 NC_015572.1 2052011 2052499 D KEGG: mag:amb0869 protein-tyrosine-phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 2052011..2052499 Methylomonas methanica MC09 10671874 YP_004512790.1 CDS Metme_1875 NC_015572.1 2052510 2053229 D PFAM: Dienelactone hydrolase; KEGG: mca:MCA1803 dienelactone hydrolase; dienelactone hydrolase 2052510..2053229 Methylomonas methanica MC09 10671875 YP_004512791.1 CDS Metme_1876 NC_015572.1 2053353 2055959 D SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: mca:MCA1421 DNA gyrase, A subunit; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; DNA gyrase subunit A 2053353..2055959 Methylomonas methanica MC09 10671876 YP_004512792.1 CDS Metme_1877 NC_015572.1 2055959 2057038 D PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; KEGG: mca:MCA1420 phosphoserine aminotransferase; phosphoserine aminotransferase 2055959..2057038 Methylomonas methanica MC09 10671877 YP_004512793.1 CDS Metme_1878 NC_015572.1 2057046 2058131 D KEGG: alv:Alvin_2084 chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; chorismate mutase 2057046..2058131 Methylomonas methanica MC09 10671878 YP_004512794.1 CDS Metme_1879 NC_015572.1 2058143 2059246 D PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: pfs:PFLU1646 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 2058143..2059246 Methylomonas methanica MC09 10671879 YP_004512795.1 CDS Metme_1880 NC_015572.1 2059239 2060117 D KEGG: mca:MCA1416 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 2059239..2060117 Methylomonas methanica MC09 10671880 YP_004512796.1 CDS Metme_1881 NC_015572.1 2060128 2061444 D PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: pap:PSPA7_1965 bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 2060128..2061444 Methylomonas methanica MC09 10671881 YP_004512797.1 CDS Metme_1882 NC_015572.1 2061446 2062102 D PFAM: Cytidylate kinase region; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: mca:MCA1414 cytidylate kinase; cytidylate kinase 2061446..2062102 Methylomonas methanica MC09 10671882 YP_004512798.1 CDS Metme_1883 NC_015572.1 2062198 2063859 D KEGG: mca:MCA1413 30S ribosomal protein S1; TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA binding domain; 30S ribosomal protein S1 2062198..2063859 Methylomonas methanica MC09 10671883 YP_004512799.1 CDS Metme_1884 NC_015572.1 2063918 2064223 D KEGG: hha:Hhal_0562 integration host factor subunit beta; PFAM: Histone-like bacterial DNA-binding protein; manually curated; TIGRFAM: Integration host factor, beta subunit; SMART: Histone-like bacterial DNA-binding protein; HAMAP: Integration host factor, beta subunit; Integration host factor subunit beta 2063918..2064223 Methylomonas methanica MC09 10671884 YP_004512800.1 CDS Metme_1885 NC_015572.1 2064332 2065291 D KEGG: app:CAP2UW1_1859 acetyl xylan esterase; manually curated; PFAM: Acetyl xylan esterase; acetyl xylan esterase 2064332..2065291 Methylomonas methanica MC09 10671885 YP_004512801.1 CDS Metme_1886 NC_015572.1 2065295 2066023 D KEGG: mgm:Mmc1_2519 esterase; manually curated; PFAM: esterase; esterase 2065295..2066023 Methylomonas methanica MC09 10671886 YP_004512802.1 CDS Metme_1887 NC_015572.1 2066080 2067174 D KEGG: nhl:Nhal_0091 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2066080..2067174 Methylomonas methanica MC09 10671887 YP_004512803.1 CDS Metme_1888 NC_015572.1 2067171 2070221 D PFAM: Acriflavin resistance protein; KEGG: noc:Noc_0201 acriflavin resistance protein; acriflavin resistance protein 2067171..2070221 Methylomonas methanica MC09 10671888 YP_004512804.1 CDS Metme_1889 NC_015572.1 2070440 2070703 D KEGG: mca:MCA0793 RNA-binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1; RNP-1 like RNA-binding protein 2070440..2070703 Methylomonas methanica MC09 10671889 YP_004512805.1 CDS Metme_1890 NC_015572.1 2070789 2071577 D KEGG: eok:G2583_3129 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2070789..2071577 Methylomonas methanica MC09 10671890 YP_004512806.1 CDS Metme_1891 NC_015572.1 2071638 2071979 D KEGG: bcb:BCB4264_A3403 alkylphosphonate utilization operon protein PhnA; TIGRFAM: PhnA protein; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal; alkylphosphonate utilization protein PhnA 2071638..2071979 Methylomonas methanica MC09 10671891 YP_004512807.1 CDS Metme_1892 NC_015572.1 2072177 2073196 D TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: tgr:Tgr7_2069 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2072177..2073196 Methylomonas methanica MC09 10671892 YP_004512808.1 CDS Metme_1893 NC_015572.1 2073443 2076022 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; PAS fold; KEGG: cps:CPS_3258 sensory box protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2073443..2076022 Methylomonas methanica MC09 10671893 YP_004512809.1 CDS Metme_1894 NC_015572.1 2076080 2076724 R KEGG: bja:blr5281 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(2076080..2076724) Methylomonas methanica MC09 10671894 YP_004512810.1 CDS Metme_1895 NC_015572.1 2076729 2078081 R KEGG: msl:Msil_2272 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; HAMP linker domain; ATP-binding region, ATPase-like; SMART: HAMP linker domain; integral membrane sensor signal transduction histidine kinase complement(2076729..2078081) Methylomonas methanica MC09 10671895 YP_004512811.1 CDS Metme_1896 NC_015572.1 2078300 2078737 D KEGG: pna:Pnap_2639 hypothetical protein; hypothetical protein 2078300..2078737 Methylomonas methanica MC09 10671896 YP_004512812.1 CDS Metme_1897 NC_015572.1 2078749 2079261 D KEGG: mfa:Mfla_0366 hypothetical protein; hypothetical protein 2078749..2079261 Methylomonas methanica MC09 10671897 YP_004512813.1 CDS Metme_1898 NC_015572.1 2079274 2079909 R KEGG: reu:Reut_A3268 beta-lactamase-like; beta-lactamase-like protein complement(2079274..2079909) Methylomonas methanica MC09 10671898 YP_004512814.1 CDS Metme_1899 NC_015572.1 2079965 2081173 R TIGRFAM: Dihydrolipoamide succinyltransferase; KEGG: tgr:Tgr7_0078 dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; 2-oxoglutarate dehydrogenase E2 complement(2079965..2081173) Methylomonas methanica MC09 10671899 YP_004512815.1 CDS Metme_1900 NC_015572.1 2081163 2084000 R TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: mca:MCA1952 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase E1 complement(2081163..2084000) Methylomonas methanica MC09 10671900 YP_004512816.1 CDS Metme_1901 NC_015572.1 2084049 2084819 D KEGG: nhl:Nhal_0411 hypothetical protein; hypothetical protein 2084049..2084819 Methylomonas methanica MC09 10671901 YP_004512817.1 CDS Metme_1902 NC_015572.1 2084890 2085207 D KEGG: mca:MCA1863 regulator protein, PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 2084890..2085207 Methylomonas methanica MC09 10671902 YP_004512818.1 CDS Metme_1903 NC_015572.1 2085200 2085988 R PFAM: Alpha/beta hydrolase fold-1; KEGG: mca:MCA0369 alpha/beta fold family hydrolase; alpha/beta hydrolase complement(2085200..2085988) Methylomonas methanica MC09 10671903 YP_004512819.1 CDS Metme_1904 NC_015572.1 2085981 2086997 R PFAM: Peptidase M14, carboxypeptidase A; KEGG: bba:Bd2418 zinc carboxypeptidase-related protein; peptidase M14 carboxypeptidase A complement(2085981..2086997) Methylomonas methanica MC09 10671904 YP_004512820.1 CDS Metme_1905 NC_015572.1 2087006 2088727 R KEGG: tcx:Tcr_2021 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(2087006..2088727) Methylomonas methanica MC09 10671905 YP_004512821.1 CDS Metme_1906 NC_015572.1 2088872 2092870 R PFAM: Protein of unknown function DUF490; KEGG: tkm:TK90_0295 protein of unknown function DUF490; hypothetical protein complement(2088872..2092870) Methylomonas methanica MC09 10671906 YP_004512822.1 CDS Metme_1907 NC_015572.1 2092867 2094597 R PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: tgr:Tgr7_0448 outer membrane protein, OMP85 family; surface antigen (D15) complement(2092867..2094597) Methylomonas methanica MC09 10671907 YP_004512823.1 CDS Metme_1908 NC_015572.1 2094986 2095327 D KEGG: cpc:Cpar_0222 hypothetical protein; hypothetical protein 2094986..2095327 Methylomonas methanica MC09 10671908 YP_004512824.1 CDS Metme_1909 NC_015572.1 2095642 2098260 D KEGG: mca:MCA0810 hypothetical protein; manually curated; TIGRFAM: Hopanoid biosynthesis associated RND transporter like protein HpnN; hopanoid biosynthesis associated RND transporter like protein HpnN 2095642..2098260 Methylomonas methanica MC09 10671909 YP_004512825.1 CDS Metme_1910 NC_015572.1 2098329 2099822 D PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: hch:HCH_02510 sulfate permease; sulfate transporter 2098329..2099822 Methylomonas methanica MC09 10671910 YP_004512826.1 CDS Metme_1911 NC_015572.1 2099822 2100688 D PFAM: UspA; KEGG: hch:HCH_02511 universal stress protein UspA-like nucleotide-binding protein; UspA domain-containing protein 2099822..2100688 Methylomonas methanica MC09 10671911 YP_004512827.1 CDS Metme_1912 NC_015572.1 2100878 2103190 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; KEGG: tdn:Suden_1041 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; PAC motif; PAS/PAC sensor-containing diguanylate cyclase 2100878..2103190 Methylomonas methanica MC09 10671912 YP_004512828.1 CDS Metme_1913 NC_015572.1 2103296 2104576 D KEGG: mca:MCA2157 ribonuclease BN, TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related; Transcriptional regulator, Rrf2; ribonuclease BN 2103296..2104576 Methylomonas methanica MC09 10671913 YP_004512829.1 CDS Metme_1914 NC_015572.1 2104573 2106768 D PFAM: Mechanosensitive ion channel MscS; KEGG: wch:wcw_1073 mechanosensitive ion channel; mechanosensitive ion channel MscS 2104573..2106768 Methylomonas methanica MC09 10671914 YP_004512830.1 CDS Metme_1915 NC_015572.1 2106915 2107508 D PFAM: Peptidase, C-terminal, archaeal/bacterial; PEP-CTERM bacterial; peptidase domain-containing protein 2106915..2107508 Methylomonas methanica MC09 10671915 YP_004512831.1 CDS Metme_1916 NC_015572.1 2107610 2109352 R KEGG: cph:Cpha266_1774 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase complement(2107610..2109352) Methylomonas methanica MC09 10671916 YP_004512832.1 CDS Metme_1917 NC_015572.1 2109471 2110448 R PFAM: Cytochrome oxidase assembly; KEGG: mca:MCA1778 cytochrome oxidase assembly protein; cytochrome oxidase assembly complement(2109471..2110448) Methylomonas methanica MC09 10671917 YP_004512833.1 CDS Metme_1918 NC_015572.1 2110454 2111296 R PFAM: Metal-dependent hydrolase HDOD; KEGG: nwa:Nwat_0678 signal transduction protein; signal transduction protein complement(2110454..2111296) Methylomonas methanica MC09 10671918 YP_004512834.1 CDS Metme_1919 NC_015572.1 2111312 2112214 R KEGG: lhk:LHK_01002 glycine cleavage T-protein (aminomethyl transferase); TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; folate-binding protein YgfZ complement(2111312..2112214) Methylomonas methanica MC09 10671919 YP_004512835.1 CDS Metme_1920 NC_015572.1 2112298 2112729 D hypothetical protein 2112298..2112729 Methylomonas methanica MC09 10671920 YP_004512836.1 CDS Metme_1921 NC_015572.1 2112729 2113595 D PFAM: Metal-dependent hydrolase HDOD; KEGG: dak:DaAHT2_1625 signal transduction protein; signal transduction protein 2112729..2113595 Methylomonas methanica MC09 10671921 YP_004512837.1 CDS Metme_1922 NC_015572.1 2113589 2114797 D SMART: Diguanylate cyclase, predicted; GAF; TIGRFAM: Diguanylate cyclase, predicted; KEGG: tgr:Tgr7_3042 response regulator receiver protein; PFAM: Diguanylate cyclase, predicted; GAF; diguanylate cyclase 2113589..2114797 Methylomonas methanica MC09 10671922 YP_004512838.1 CDS Metme_1923 NC_015572.1 2115041 2116132 D KEGG: gpb:HDN1F_18490 predicted GTPase, probable translation factor; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related; GTP-binding protein YchF 2115041..2116132 Methylomonas methanica MC09 10671923 YP_004512839.1 CDS Metme_1924 NC_015572.1 2116272 2117303 R PFAM: Integrase, catalytic core, phage; KEGG: afr:AFE_0995 site-specific recombinase, phage integrase; integrase complement(2116272..2117303) Methylomonas methanica MC09 10671925 YP_004512840.1 CDS Metme_1926 NC_015572.1 2118264 2120318 D PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: nwa:Nwat_1158 TonB-dependent receptor plug; TonB-dependent receptor plug 2118264..2120318 Methylomonas methanica MC09 10671927 YP_004512841.1 CDS Metme_1927 NC_015572.1 2120306 2121655 D KEGG: mxa:MXAN_2304 cytochrome P450 family protein; PFAM: Cytochrome P450; monooxygenase 2120306..2121655 Methylomonas methanica MC09 10671928 YP_004512842.1 CDS Metme_1928 NC_015572.1 2121757 2122701 D KEGG: cja:CJA_0757 signal transduction protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 2121757..2122701 Methylomonas methanica MC09 10671929 YP_004512843.1 CDS Metme_1929 NC_015572.1 2122682 2124145 R KEGG: cyn:Cyan7425_3699 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase complement(2122682..2124145) Methylomonas methanica MC09 10671930 YP_004512844.1 CDS Metme_1930 NC_015572.1 2124142 2125020 R KEGG: nhl:Nhal_1406 hypothetical protein; hypothetical protein complement(2124142..2125020) Methylomonas methanica MC09 10671931 YP_004512845.1 CDS Metme_1931 NC_015572.1 2125001 2125939 R hypothetical protein complement(2125001..2125939) Methylomonas methanica MC09 10671932 YP_004512846.1 CDS Metme_1932 NC_015572.1 2126169 2127002 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: hha:Hhal_0643 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 2126169..2127002 Methylomonas methanica MC09 10671933 YP_004512847.1 CDS Metme_1933 NC_015572.1 2126999 2128510 D KEGG: hha:Hhal_0642 hypothetical protein; hypothetical protein 2126999..2128510 Methylomonas methanica MC09 10671934 YP_004512848.1 CDS Metme_1934 NC_015572.1 2128524 2129081 D KEGG: hdu:HD0969 hypothetical protein; hypothetical protein 2128524..2129081 Methylomonas methanica MC09 10671935 YP_004512849.1 CDS Metme_1935 NC_015572.1 2129133 2130467 D KEGG: noc:Noc_0621 hypothetical protein; hypothetical protein 2129133..2130467 Methylomonas methanica MC09 10671936 YP_004512850.1 CDS Metme_1936 NC_015572.1 2130730 2131617 D KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4669 family; PFAM: Protein of unknown function DUF1845; integrating conjugative element protein 2130730..2131617 Methylomonas methanica MC09 10671937 YP_004512851.1 CDS Metme_1937 NC_015572.1 2131708 2132142 D hypothetical protein 2131708..2132142 Methylomonas methanica MC09 10671938 YP_004512852.1 CDS Metme_1938 NC_015572.1 2132483 2136529 D KEGG: ara:Arad_7837 adenylate/guanylate cyclase; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2132483..2136529 Methylomonas methanica MC09 10671939 YP_004512853.1 CDS Metme_1939 NC_015572.1 2136488 2136709 R hypothetical protein complement(2136488..2136709) Methylomonas methanica MC09 10671940 YP_004512854.1 CDS Metme_1941 NC_015572.1 2137721 2139265 D KEGG: tau:Tola_1606 integrase catalytic region; manually curated; PFAM: Integrase, catalytic core; integrase catalytic subunit 2137721..2139265 Methylomonas methanica MC09 10671942 YP_004512855.1 CDS Metme_1942 NC_015572.1 2139376 2140131 D PFAM: IstB-like ATP-binding protein; KEGG: tau:Tola_1607 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein 2139376..2140131 Methylomonas methanica MC09 10671943 YP_004512856.1 CDS Metme_1943 NC_015572.1 2140262 2141146 D KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; hypothetical protein 2140262..2141146 Methylomonas methanica MC09 10671944 YP_004512857.1 CDS Metme_1944 NC_015572.1 2141330 2142513 R KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(join(2141330..2142250,2142250..2142513)) Methylomonas methanica MC09 10671945 YP_004512858.1 CDS Metme_1945 NC_015572.1 2142662 2143519 R hypothetical protein complement(2142662..2143519) Methylomonas methanica MC09 10671946 YP_004512859.1 CDS Metme_1946 NC_015572.1 2143791 2143964 D hypothetical protein 2143791..2143964 Methylomonas methanica MC09 10671947 YP_004512860.1 CDS Metme_1947 NC_015572.1 2144334 2144903 D KEGG: nwa:Nwat_1520 PEBP family protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP; hypothetical protein 2144334..2144903 Methylomonas methanica MC09 10671948 YP_004512861.1 CDS Metme_1948 NC_015572.1 2144949 2145608 D PFAM: Protein of unknown function DUF159; KEGG: cyj:Cyan7822_4818 hypothetical protein; hypothetical protein 2144949..2145608 Methylomonas methanica MC09 10671949 YP_004512862.1 CDS Metme_1949 NC_015572.1 2145799 2146419 D PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix region; KEGG: ecv:APECO1_O1CoBM103 resolvase; resolvase domain-containing protein 2145799..2146419 Methylomonas methanica MC09 10671950 YP_004512863.1 CDS Metme_1950 NC_015572.1 2146423 2146665 D KEGG: nhl:Nhal_3374 WGR domain protein; PFAM: WGR; SMART: WGR; WGR domain-containing protein 2146423..2146665 Methylomonas methanica MC09 10671951 YP_004512864.1 CDS Metme_1951 NC_015572.1 2146715 2146834 D hypothetical protein 2146715..2146834 Methylomonas methanica MC09 10671952 YP_004512865.1 CDS Metme_1952 NC_015572.1 2146971 2148482 D PFAM: Transposase, IS4-like; KEGG: mac:MA1045 transposase; transposase IS4 family protein 2146971..2148482 Methylomonas methanica MC09 10671953 YP_004512866.1 CDS Metme_1953 NC_015572.1 2148608 2148790 D KEGG: nhl:Nhal_2861 CopG domain protein DNA-binding domain protein; DNA-binding domain-containing protein 2148608..2148790 Methylomonas methanica MC09 10671954 YP_004512867.1 CDS Metme_1954 NC_015572.1 2148787 2149062 D KEGG: nhl:Nhal_2862 addiction module toxin, RelE/StbE family; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin 2148787..2149062 Methylomonas methanica MC09 10671955 YP_004512868.1 CDS Metme_1955 NC_015572.1 2149378 2150748 D KEGG: spl:Spea_2921 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2149378..2150748 Methylomonas methanica MC09 10671956 YP_004512869.1 CDS Metme_1957 NC_015572.1 2151216 2151548 D PFAM: Transposase IS3/IS911; KEGG: azl:AZL_f00580 transposase; transposase IS3/IS911 family protein 2151216..2151548 Methylomonas methanica MC09 10671957 YP_004512870.1 CDS Metme_1958 NC_015572.1 2151545 2152447 D PFAM: Integrase, catalytic core; KEGG: psp:PSPPH_A0089 ISPsy21, transposase orfB; integrase catalytic subunit 2151545..2152447 Methylomonas methanica MC09 10671958 YP_004512871.1 CDS Metme_1959 NC_015572.1 2153177 2153542 D KEGG: gdj:Gdia_1685 hypothetical protein; hypothetical protein 2153177..2153542 Methylomonas methanica MC09 10671959 YP_004512872.1 CDS Metme_1960 NC_015572.1 2153593 2154078 D KEGG: gdj:Gdia_1686 RES domain protein; manually curated; PFAM: RES; RES domain-containing protein 2153593..2154078 Methylomonas methanica MC09 10671960 YP_004512873.1 CDS Metme_1961 NC_015572.1 2154068 2154388 D KEGG: swi:Swit_0155 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF1044; hypothetical protein 2154068..2154388 Methylomonas methanica MC09 10671961 YP_004512874.1 CDS Metme_1962 NC_015572.1 2154369 2154533 D KEGG: alv:Alvin_3149 transcriptional regulator, XRE family; hypothetical protein 2154369..2154533 Methylomonas methanica MC09 10671962 YP_004512875.1 CDS Metme_1963 NC_015572.1 2154567 2156120 D KEGG: bxe:Bxe_A0224 type I restriction-modification system, M subunit; PFAM: DNA methylase, adenine-specific; adenine-specific DNA methyltransferase 2154567..2156120 Methylomonas methanica MC09 10671963 YP_004512876.1 CDS Metme_1964 NC_015572.1 2156110 2157174 D PFAM: Protein of unknown function DUF1016; KEGG: rsc:RCFBP_11648 hypothetical protein; hypothetical protein 2156110..2157174 Methylomonas methanica MC09 10671964 YP_004512877.1 CDS Metme_1965 NC_015572.1 2157171 2158571 D PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: spc:Sputcn32_2909 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein 2157171..2158571 Methylomonas methanica MC09 10671965 YP_004512878.1 CDS Metme_1966 NC_015572.1 2158673 2159821 D PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: filamentation induced by camp protein fic; Fic family protein 2158673..2159821 Methylomonas methanica MC09 10671966 YP_004512879.1 CDS Metme_1967 NC_015572.1 2159865 2162999 D TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: app:CAP2UW1_1871 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal; HsdR family type I site-specific deoxyribonuclease 2159865..2162999 Methylomonas methanica MC09 10671967 YP_004512880.1 CDS Metme_1968 NC_015572.1 2163457 2165016 D KEGG: tbd:Tbd_0353 hypothetical protein; hypothetical protein 2163457..2165016 Methylomonas methanica MC09 10671968 YP_004512881.1 CDS Metme_1969 NC_015572.1 2165457 2166068 R hypothetical protein complement(2165457..2166068) Methylomonas methanica MC09 10671969 YP_004512882.1 CDS Metme_1970 NC_015572.1 2166055 2166660 R PFAM: Exosortase EpsH-related; KEGG: srm:SRM_00719 conserved hypothetical protein, membrane; exosortase complement(2166055..2166660) Methylomonas methanica MC09 10671970 YP_004512883.1 CDS Metme_1971 NC_015572.1 2166623 2167642 R KEGG: nde:NIDE1715 hypothetical protein; TIGRFAM: YD repeat; PFAM: YD repeat; hypothetical protein complement(2166623..2167642) Methylomonas methanica MC09 10671971 YP_004512884.1 CDS Metme_1972 NC_015572.1 2167705 2168478 R KEGG: mpi:Mpet_1589 YD repeat protein; TIGRFAM: YD repeat; PFAM: YD repeat; hypothetical protein complement(2167705..2168478) Methylomonas methanica MC09 10671972 YP_004512885.1 CDS Metme_1973 NC_015572.1 2168904 2176184 R KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: Transglutaminase-like; YD repeat; RHS repeat-associated core domain-containing protein complement(2168904..2176184) Methylomonas methanica MC09 10671973 YP_004512886.1 CDS Metme_1974 NC_015572.1 2176181 2176915 R hypothetical protein complement(2176181..2176915) Methylomonas methanica MC09 10671974 YP_004512887.1 CDS Metme_1975 NC_015572.1 2176926 2178158 R KEGG: gme:Gmet_1475 YD repeat-containing protein; hypothetical protein complement(2176926..2178158) Methylomonas methanica MC09 10671975 YP_004512888.1 CDS Metme_1977 NC_015572.1 2179209 2179616 D PFAM: Transposase IS3/IS911; KEGG: dac:Daci_3090 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2179209..2179616 Methylomonas methanica MC09 10671977 YP_004512889.1 CDS Metme_1978 NC_015572.1 2179592 2179942 D PFAM: Transposase (), IS66 Orf2 like; KEGG: cti:pRALTA_0497 transposase IS66 Orf2 like protein; IS66 Orf2 family protein 2179592..2179942 Methylomonas methanica MC09 10671978 YP_004512890.1 CDS Metme_1979 NC_015572.1 2179974 2181536 D PFAM: Transposase, IS66; KEGG: reu:Reut_C6183 transposase IS66; transposase IS66 2179974..2181536 Methylomonas methanica MC09 10671979 YP_004512891.1 CDS Metme_1981 NC_015572.1 2182382 2182873 D KEGG: tmz:Tmz1t_0978 hypothetical protein; hypothetical protein 2182382..2182873 Methylomonas methanica MC09 10671981 YP_004512892.1 CDS Metme_1982 NC_015572.1 2183579 2184031 D hypothetical protein 2183579..2184031 Methylomonas methanica MC09 10671982 YP_004512893.1 CDS Metme_1983 NC_015572.1 2184191 2184664 D KEGG: rso:RSc2620 hypothetical protein; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like; DNA repair protein RadC 2184191..2184664 Methylomonas methanica MC09 10671983 YP_004512894.1 CDS Metme_1984 NC_015572.1 2184756 2185574 D PFAM: Protein of unknown function DUF932; KEGG: ajs:Ajs_4210 hypothetical protein; hypothetical protein 2184756..2185574 Methylomonas methanica MC09 10671984 YP_004512895.1 CDS Metme_1985 NC_015572.1 2185658 2186080 D KEGG: pnu:Pnuc_1692 hypothetical protein; hypothetical protein 2185658..2186080 Methylomonas methanica MC09 10671985 YP_004512896.1 CDS Metme_1986 NC_015572.1 2186105 2186293 D KEGG: eta:ETA_pET350270 hypothetical protein; hypothetical protein 2186105..2186293 Methylomonas methanica MC09 10671986 YP_004512897.1 CDS Metme_1987 NC_015572.1 2186394 2187695 R KEGG: shw:Sputw3181_1082 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like; DNA-directed DNA polymerase complement(2186394..2187695) Methylomonas methanica MC09 10671987 YP_004512898.1 CDS Metme_1988 NC_015572.1 2187692 2188171 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: syn:sll5123 hypothetical protein; peptidase S24/S26A/S26B complement(2187692..2188171) Methylomonas methanica MC09 10671988 YP_004512899.1 CDS Metme_1989 NC_015572.1 2188322 2189722 D SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: dar:Daro_1907 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon 2188322..2189722 Methylomonas methanica MC09 10671989 YP_004512900.1 CDS Metme_1990 NC_015572.1 2189701 2190366 D PFAM: Protein of unknown function DUF159; KEGG: ava:Ava_3892 hypothetical protein; hypothetical protein 2189701..2190366 Methylomonas methanica MC09 10671990 YP_004512901.1 CDS Metme_1991 NC_015572.1 2190489 2190779 D KEGG: avn:Avin_39840 hypothetical protein; hypothetical protein 2190489..2190779 Methylomonas methanica MC09 10671991 YP_004512902.1 CDS Metme_1992 NC_015572.1 2190980 2191192 D hypothetical protein 2190980..2191192 Methylomonas methanica MC09 10671992 YP_004512903.1 CDS Metme_1993 NC_015572.1 2191242 2192996 D KEGG: mgm:Mmc1_2003 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein 2191242..2192996 Methylomonas methanica MC09 10671993 YP_004512904.1 CDS Metme_1994 NC_015572.1 2193168 2194370 D KEGG: cco:CCC13826_0131 peptidoglycan associated lipoprotein; PFAM: Peptidase S41; SMART: Peptidase S41; peptidase S41 2193168..2194370 Methylomonas methanica MC09 10671994 YP_004512905.1 CDS Metme_1995 NC_015572.1 2194539 2194835 R hypothetical protein complement(2194539..2194835) Methylomonas methanica MC09 10671995 YP_004512906.1 CDS Metme_1996 NC_015572.1 2195015 2195308 D PFAM: Nucleotidyltransferase; KEGG: mbn:Mboo_0854 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein 2195015..2195308 Methylomonas methanica MC09 10671996 YP_004512907.1 CDS Metme_1997 NC_015572.1 2195345 2195776 R PFAM: Fertility inhibition FinO-like; KEGG: bmj:BMULJ_05375 ProP effector; Fertility inhibition FinO-like protein complement(2195345..2195776) Methylomonas methanica MC09 10671997 YP_004512908.1 CDS Metme_1998 NC_015572.1 2196236 2196805 D KEGG: noc:Noc_0628 PilL protein; hypothetical protein 2196236..2196805 Methylomonas methanica MC09 10671998 YP_004512909.1 CDS Metme_1999 NC_015572.1 2196802 2197629 D KEGG: gpb:HDN1F_34980 hypothetical protein; hypothetical protein 2196802..2197629 Methylomonas methanica MC09 10671999 YP_004512910.1 CDS Metme_2000 NC_015572.1 2197607 2198383 D TIGRFAM: integrating conjugative element protein, PFL_4693 family; KEGG: hso:HS_1747 hypothetical protein; integrating conjugative element protein 2197607..2198383 Methylomonas methanica MC09 10672000 YP_004512911.1 CDS Metme_2001 NC_015572.1 2198384 2198950 D PFAM: Lytic transglycosylase-like, catalytic; KEGG: noc:Noc_0630 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 2198384..2198950 Methylomonas methanica MC09 10672001 YP_004512912.1 CDS Metme_2002 NC_015572.1 2198982 2199707 R PFAM: DSBA oxidoreductase; KEGG: tgr:Tgr7_1053 hypothetical protein; DSBA oxidoreductase complement(2198982..2199707) Methylomonas methanica MC09 10672002 YP_004512913.1 CDS Metme_2003 NC_015572.1 2199798 2200601 D PFAM: ParB-like nuclease; SMART: ParB-like nuclease; ParB domain-containing protein nuclease 2199798..2200601 Methylomonas methanica MC09 10672003 YP_004512914.1 CDS Metme_2005 NC_015572.1 2201313 2202371 R hypothetical protein complement(2201313..2202371) Methylomonas methanica MC09 10672005 YP_004512915.1 CDS Metme_2006 NC_015572.1 2202564 2203928 R KEGG: eba:p1B277 transposase; transposase complement(2202564..2203928) Methylomonas methanica MC09 10672006 YP_004512916.1 CDS Metme_2007 NC_015572.1 2203992 2204492 R hypothetical protein complement(2203992..2204492) Methylomonas methanica MC09 10672007 YP_004512917.1 CDS Metme_2008 NC_015572.1 2204774 2205733 R KEGG: gem:GM21_1244 hypothetical protein; hypothetical protein complement(2204774..2205733) Methylomonas methanica MC09 10672008 YP_004512918.1 CDS Metme_2009 NC_015572.1 2205910 2206719 R KEGG: tmz:Tmz1t_2283 hypothetical protein; hypothetical protein complement(2205910..2206719) Methylomonas methanica MC09 10672009 YP_004512919.1 CDS Metme_2010 NC_015572.1 2206735 2207016 R manually curated; hypothetical protein complement(2206735..2207016) Methylomonas methanica MC09 10672010 YP_004512920.1 CDS Metme_2011 NC_015572.1 2207132 2207674 R PFAM: Flavin reductase-like, FMN-binding; KEGG: tgr:Tgr7_1944 flavin reductase domain protein FMN-binding; flavin reductase domain-containing FMN-binding protein complement(2207132..2207674) Methylomonas methanica MC09 10672011 YP_004512921.1 CDS Metme_2012 NC_015572.1 2207795 2208418 R PFAM: Integrase, catalytic core, phage; KEGG: gca:Galf_2491 integrase; integrase complement(2207795..2208418) Methylomonas methanica MC09 10672012 YP_004512922.1 CDS Metme_2013 NC_015572.1 2208606 2209097 D TIGRFAM: integrating conjugative element protein, PFL_4695 family; KEGG: net:Neut_0099 hypothetical protein; integrating conjugative element protein 2208606..2209097 Methylomonas methanica MC09 10672013 YP_004512923.1 CDS Metme_2014 NC_015572.1 2209094 2211148 D TIGRFAM: conjugative coupling factor TraD, SXT/TOL subfamily; KEGG: noc:Noc_0632 hypothetical protein; conjugative coupling factor TraD 2209094..2211148 Methylomonas methanica MC09 10672014 YP_004512924.1 CDS Metme_2016 NC_015572.1 2211544 2211978 D PFAM: Transposase IS200-like; KEGG: eba:ebA563 transposition helper protein; transposase IS200-family protein 2211544..2211978 Methylomonas methanica MC09 10672016 YP_004512925.1 CDS Metme_2017 NC_015572.1 2213029 2213826 D KEGG: syf:Synpcc7942_0761 hypothetical protein; hypothetical protein 2213029..2213826 Methylomonas methanica MC09 10672017 YP_004512926.1 CDS Metme_2018 NC_015572.1 2214273 2215787 D KEGG: cyn:Cyan7425_2057 leucine-rich repeat protein; PFAM: Leucine-rich repeat; adenylate cyclase 2214273..2215787 Methylomonas methanica MC09 10672018 YP_004512927.1 CDS Metme_2019 NC_015572.1 2215817 2216548 D KEGG: ant:Arnit_2460 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 2215817..2216548 Methylomonas methanica MC09 10672019 YP_004512928.1 CDS Metme_2020 NC_015572.1 2216610 2217668 D PFAM: FRG domain; KEGG: pwa:Pecwa_1726 FRG domain protein; FRG domain-containing protein 2216610..2217668 Methylomonas methanica MC09 10672020 YP_004512929.1 CDS Metme_2021 NC_015572.1 2218175 2218465 D KEGG: noc:Noc_0640 hypothetical protein; TIGRFAM: Protein of unknown function, RAQPRD; PFAM: Protein of unknown function, RAQPRD; hypothetical protein 2218175..2218465 Methylomonas methanica MC09 10672021 YP_004512930.1 CDS Metme_2022 NC_015572.1 2218476 2218709 D KEGG: noc:Noc_0641 hypothetical protein; hypothetical protein 2218476..2218709 Methylomonas methanica MC09 10672022 YP_004512931.1 CDS Metme_2023 NC_015572.1 2218736 2219095 D TIGRFAM: integrating conjugative element membrane protein, PFL_4702 family; KEGG: noc:Noc_0642 hypothetical protein; integrating conjugative element membrane protein 2218736..2219095 Methylomonas methanica MC09 10672023 YP_004512932.1 CDS Metme_2024 NC_015572.1 2219098 2219475 D TIGRFAM: conjugative transfer region protein, TIGR03750 family; KEGG: noc:Noc_0643 hypothetical protein; conjugative transfer region protein 2219098..2219475 Methylomonas methanica MC09 10672024 YP_004512933.1 CDS Metme_2025 NC_015572.1 2219475 2220119 D TIGRFAM: integrating conjugative element protein, PFL_4703 family; KEGG: noc:Noc_0644 hypothetical protein; integrating conjugative element protein 2219475..2220119 Methylomonas methanica MC09 10672025 YP_004512934.1 CDS Metme_2026 NC_015572.1 2220130 2220981 D TIGRFAM: integrating conjugative element protein, PFL_4704 family; KEGG: noc:Noc_0645 hypothetical protein; integrating conjugative element protein 2220130..2220981 Methylomonas methanica MC09 10672026 YP_004512935.1 CDS Metme_2027 NC_015572.1 2220983 2222386 D TIGRFAM: integrating conjugative element protein, PFL_4705 family; KEGG: noc:Noc_0646 hypothetical protein; integrating conjugative element protein 2220983..2222386 Methylomonas methanica MC09 10672027 YP_004512936.1 CDS Metme_2028 NC_015572.1 2222373 2222819 D TIGRFAM: conjugative transfer region lipoprotein, TIGR03751 family; KEGG: noc:Noc_0647 hypothetical protein; conjugative transfer region lipoprotein 2222373..2222819 Methylomonas methanica MC09 10672028 YP_004512937.1 CDS Metme_2029 NC_015572.1 2222819 2225629 D TIGRFAM: conjugative transfer ATPase, PFL_4706 family; KEGG: noc:Noc_0648 hypothetical protein; conjugative transfer ATPase 2222819..2225629 Methylomonas methanica MC09 10672029 YP_004512938.1 CDS Metme_2030 NC_015572.1 2225683 2226123 D KEGG: noc:Noc_0650 hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4709 family; PFAM: Protein of unknown function DUF1525; integrating conjugative element protein 2225683..2226123 Methylomonas methanica MC09 10672030 YP_004512939.1 CDS Metme_2032 NC_015572.1 2226718 2227620 R PFAM: Integrase, catalytic core; KEGG: psp:PSPPH_A0089 ISPsy21, transposase orfB; integrase catalytic subunit complement(2226718..2227620) Methylomonas methanica MC09 10672031 YP_004512940.1 CDS Metme_2033 NC_015572.1 2227617 2227949 R KEGG: azl:AZL_f00580 transposase; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(2227617..2227949) Methylomonas methanica MC09 10672032 YP_004512941.1 CDS Metme_2034 NC_015572.1 2228352 2229713 D TIGRFAM: integrating conjugative element protein, PFL_4711 family; KEGG: noc:Noc_0652 hypothetical protein; integrating conjugative element protein 2228352..2229713 Methylomonas methanica MC09 10672033 YP_004512942.1 CDS Metme_2035 NC_015572.1 2229710 2230096 D hypothetical protein 2229710..2230096 Methylomonas methanica MC09 10672034 YP_004512943.1 CDS Metme_2036 NC_015572.1 2230093 2231613 D KEGG: noc:Noc_0653 hypothetical protein; hypothetical protein 2230093..2231613 Methylomonas methanica MC09 10672035 YP_004512944.1 CDS Metme_2037 NC_015572.1 2231644 2232099 D hypothetical protein 2231644..2232099 Methylomonas methanica MC09 10672036 YP_004512945.1 CDS Metme_2038 NC_015572.1 2232106 2232954 D KEGG: eba:ebA436 hypothetical protein; hypothetical protein 2232106..2232954 Methylomonas methanica MC09 10672037 YP_004512946.1 CDS Metme_2039 NC_015572.1 2232979 2233614 R hypothetical protein complement(2232979..2233614) Methylomonas methanica MC09 10672038 YP_004512947.1 CDS Metme_2040 NC_015572.1 2233842 2234318 R KEGG: app:CAP2UW1_0602 inorganic pyrophosphatase; inorganic pyrophosphatase complement(2233842..2234318) Methylomonas methanica MC09 10672039 YP_004512948.1 CDS Metme_2041 NC_015572.1 2234547 2236310 D KEGG: tau:Tola_2455 relaxase; TIGRFAM: integrating conjugative element relaxase, PFGI-1 class; PFAM: Protein of unknown function, helicase/relaxase; Protein of unknown function DUF1528, C-terminal; integrating conjugative element relaxase, PFGI-1 class 2234547..2236310 Methylomonas methanica MC09 10672040 YP_004512949.1 CDS Metme_2044 NC_015572.1 2237444 2237542 D hypothetical protein 2237444..2237542 Methylomonas methanica MC09 10672043 YP_004512950.1 CDS Metme_2045 NC_015572.1 2237889 2238638 R KEGG: cyn:Cyan7425_3995 hypothetical protein; hypothetical protein complement(2237889..2238638) Methylomonas methanica MC09 10672044 YP_004512951.1 CDS Metme_2046 NC_015572.1 2238727 2238942 R KEGG: mca:MCA1531 hypothetical protein; hypothetical protein complement(2238727..2238942) Methylomonas methanica MC09 10672045 YP_004512952.1 CDS Metme_2047 NC_015572.1 2238978 2240054 R PFAM: Radical SAM; KEGG: mfa:Mfla_1266 radical SAM family protein; radical SAM protein complement(2238978..2240054) Methylomonas methanica MC09 10672046 YP_004512953.1 CDS Metme_2048 NC_015572.1 2240242 2241525 D PFAM: Protein of unknown function DUF2130; KEGG: rfr:Rfer_0075 hypothetical protein; hypothetical protein 2240242..2241525 Methylomonas methanica MC09 10672047 YP_004512954.1 CDS Metme_2049 NC_015572.1 2241642 2244179 R KEGG: cwo:Cwoe_4861 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: HTH transcriptional regulator, ArsR; Tetratricopeptide repeat; hypothetical protein complement(2241642..2244179) Methylomonas methanica MC09 10672048 YP_004512955.1 CDS Metme_2050 NC_015572.1 2244191 2245375 R KEGG: cwo:Cwoe_4860 hypothetical protein; hypothetical protein complement(2244191..2245375) Methylomonas methanica MC09 10672049 YP_004512956.1 CDS Metme_2051 NC_015572.1 2245882 2249631 R KEGG: rhi:NGR_b16700 WD-repeart protein, beta transducin-like protein; hypothetical protein complement(2245882..2249631) Methylomonas methanica MC09 10672050 YP_004512957.1 CDS Metme_2052 NC_015572.1 2249945 2250748 R KEGG: mlo:mll5814 N-hydroxyarylamine O-acetyltransferase; PFAM: N-acetyltransferase; N-hydroxyarylamine O-acetyltransferase complement(2249945..2250748) Methylomonas methanica MC09 10672051 YP_004512958.1 CDS Metme_2053 NC_015572.1 2250884 2251489 D KEGG: cja:CJA_0650 hypothetical protein; hypothetical protein 2250884..2251489 Methylomonas methanica MC09 10672052 YP_004512959.1 CDS Metme_2054 NC_015572.1 2251591 2251953 R PFAM: BLUF; KEGG: lxx:Lxx04275 photopigment and puc expression activator; BLUF domain-containing protein complement(2251591..2251953) Methylomonas methanica MC09 10672053 YP_004512960.1 CDS Metme_2055 NC_015572.1 2252142 2252660 D KEGG: tbd:Tbd_1195 hypothetical protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; Appr-1-p processing protein 2252142..2252660 Methylomonas methanica MC09 10672054 YP_004512961.1 CDS Metme_2056 NC_015572.1 2252651 2253295 R PFAM: Methyltransferase type 12; KEGG: kko:Kkor_0489 methyltransferase-related protein; type 12 methyltransferase complement(2252651..2253295) Methylomonas methanica MC09 10672055 YP_004512962.1 CDS Metme_2057 NC_015572.1 2253585 2254013 D PFAM: Heat shock protein Hsp20; KEGG: aav:Aave_1292 heat shock protein HSP20; heat shock protein Hsp20 2253585..2254013 Methylomonas methanica MC09 10672057 YP_004512963.1 CDS Metme_2058 NC_015572.1 2254071 2254574 R PFAM: NUDIX hydrolase domain; KEGG: ote:Oter_2376 NUDIX hydrolase; NUDIX hydrolase complement(2254071..2254574) Methylomonas methanica MC09 10672058 YP_004512964.1 CDS Metme_2059 NC_015572.1 2254644 2255273 D PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: abo:ABO_0054 TetR family transcriptional regulator; TetR family transcriptional regulator 2254644..2255273 Methylomonas methanica MC09 10672059 YP_004512965.1 CDS Metme_2060 NC_015572.1 2255215 2256387 R PFAM: Major facilitator superfamily MFS-1; KEGG: mca:MCA2465 lysophospholipid transporter LplT; major facilitator superfamily protein complement(2255215..2256387) Methylomonas methanica MC09 10672060 YP_004512966.1 CDS Metme_2061 NC_015572.1 2256394 2258550 R PFAM: AMP-dependent synthetase/ligase; Phospholipid/glycerol acyltransferase; KEGG: nhl:Nhal_2321 AMP-dependent synthetase and ligase; SMART: Phospholipid/glycerol acyltransferase; acyl-ACP--phospholipid O-acyltransferase complement(2256394..2258550) Methylomonas methanica MC09 10672061 YP_004512967.1 CDS Metme_2062 NC_015572.1 2258775 2259869 R PFAM: PEP-CTERM bacterial; KEGG: sus:Acid_6890 hypothetical protein; hypothetical protein complement(2258775..2259869) Methylomonas methanica MC09 10672062 YP_004512968.1 CDS Metme_2063 NC_015572.1 2260053 2262227 R PFAM: Cell surface receptor IPT/TIG; KEGG: acp:A2cp1_3119 hypothetical protein; cell surface receptor IPT/TIG domain-containing protein complement(2260053..2262227) Methylomonas methanica MC09 10672063 YP_004512969.1 CDS Metme_2064 NC_015572.1 2262374 2264155 R KEGG: sfu:Sfum_0766 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core; type II secretion system protein E complement(2262374..2264155) Methylomonas methanica MC09 10672064 YP_004512970.1 CDS Metme_2065 NC_015572.1 2264223 2264777 R KEGG: dar:Daro_0969 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein complement(2264223..2264777) Methylomonas methanica MC09 10672065 YP_004512971.1 CDS Metme_2066 NC_015572.1 2264826 2265545 D KEGG: dak:DaAHT2_0232 hypothetical protein; hypothetical protein 2264826..2265545 Methylomonas methanica MC09 10672066 YP_004512972.1 CDS Metme_2067 NC_015572.1 2265555 2266847 R KEGG: gca:Galf_0834 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein complement(2265555..2266847) Methylomonas methanica MC09 10672067 YP_004512973.1 CDS Metme_2068 NC_015572.1 2266870 2268615 R TIGRFAM: Haemerythrin-like, metal-binding; PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Haemerythrin/HHE cation-binding motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: dar:Daro_0965 PAS:hemerythrin HHE cation binding region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; PAS/PAC sensor signal transduction histidine kinase complement(2266870..2268615) Methylomonas methanica MC09 10672068 YP_004512974.1 CDS Metme_2069 NC_015572.1 2268831 2269949 D TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; KEGG: mca:MCA0563 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, N-terminal; Alanine dehydrogenase/PNT, C-terminal; alanine dehydrogenase 2268831..2269949 Methylomonas methanica MC09 10672069 YP_004512975.1 CDS Metme_2070 NC_015572.1 2270093 2271229 D KEGG: dar:Daro_3172 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 2270093..2271229 Methylomonas methanica MC09 10672070 YP_004512976.1 CDS Metme_2072 NC_015572.1 2271806 2272717 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: slt:Slit_1030 transcriptional regulator, LysR family; LysR family transcriptional regulator 2271806..2272717 Methylomonas methanica MC09 10672072 YP_004512977.1 CDS Metme_2073 NC_015572.1 2273079 2273249 D KEGG: dak:DaAHT2_1647 hypothetical protein; hypothetical protein 2273079..2273249 Methylomonas methanica MC09 10672073 YP_004512978.1 CDS Metme_2074 NC_015572.1 2273507 2273614 D hypothetical protein 2273507..2273614 Methylomonas methanica MC09 10672074 YP_004512979.1 CDS Metme_2075 NC_015572.1 2273735 2275528 D TIGRFAM: PAS; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Signal transduction response regulator, receiver region; PAS fold; KEGG: abu:Abu_0453 two-component response regulator; SMART: Signal transduction response regulator, receiver region; PAS; PAC motif; Metal-dependent phosphohydrolase, HD region; PAS/PAC sensor protein 2273735..2275528 Methylomonas methanica MC09 10672075 YP_004512980.1 CDS Metme_2076 NC_015572.1 2275533 2276951 D PFAM: Outer membrane efflux protein; KEGG: ppd:Ppro_1440 outer membrane efflux protein; outer membrane efflux protein 2275533..2276951 Methylomonas methanica MC09 10672076 YP_004512981.1 CDS Metme_2077 NC_015572.1 2277159 2278067 D KEGG: ote:Oter_4131 ABC-type phosphate/phosphonate transport system periplasmic component-like protein; hypothetical protein 2277159..2278067 Methylomonas methanica MC09 10672077 YP_004512982.1 CDS Metme_2078 NC_015572.1 2278228 2278797 R PFAM: Cytochrome c, class I; KEGG: cps:CPS_0283 cytochrome c family protein; cytochrome c class I complement(2278228..2278797) Methylomonas methanica MC09 10672078 YP_004512983.1 CDS Metme_2079 NC_015572.1 2278929 2280596 D KEGG: asa:ASA_0825 hypothetical protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication; Regulator of K+ conductance, C-terminal; hypothetical protein 2278929..2280596 Methylomonas methanica MC09 10672079 YP_004512984.1 CDS Metme_2080 NC_015572.1 2280603 2281199 D KEGG: pat:Patl_0448 2OG-Fe(II) oxygenase; manually curated; PFAM: Oxoglutarate/iron-dependent oxygenase; 2OG-Fe(II) oxygenase 2280603..2281199 Methylomonas methanica MC09 10672080 YP_004512985.1 CDS Metme_2081 NC_015572.1 2281308 2281865 R PFAM: GCN5-related N-acetyltransferase; KEGG: drt:Dret_0159 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2281308..2281865) Methylomonas methanica MC09 10672081 YP_004512986.1 CDS Metme_2082 NC_015572.1 2281909 2282916 D KEGG: mca:MCA1033 hypothetical protein; manually curated; PFAM: Alpha/beta hydrolase fold-1; alpha/beta hydrolase 2281909..2282916 Methylomonas methanica MC09 10672082 YP_004512987.1 CDS Metme_2083 NC_015572.1 2282964 2283587 R KEGG: sli:Slin_2409 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase; inorganic diphosphatase complement(2282964..2283587) Methylomonas methanica MC09 10672083 YP_004512988.1 CDS Metme_2084 NC_015572.1 2283672 2284844 R SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: mca:MCA2836 molybdenum ABC transporter, ATP-binding protein, PFAM: ABC transporter-like; Transport-associated OB, type 1; molybdate ABC transporter ATPase complement(2283672..2284844) Methylomonas methanica MC09 10672084 YP_004512989.1 CDS Metme_2085 NC_015572.1 2284912 2285340 R KEGG: mca:MCA1381 molybdenum transport protein ModG, TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; molybdenum-pterin-binding protein complement(2284912..2285340) Methylomonas methanica MC09 10672085 YP_004512990.1 CDS Metme_2086 NC_015572.1 2285363 2286505 R SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: mca:MCA1380 molybdenum ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; molybdate ABC transporter ATPase complement(2285363..2286505) Methylomonas methanica MC09 10672086 YP_004512991.1 CDS Metme_2087 NC_015572.1 2286502 2287185 R KEGG: pap:PSPA7_3428 molybdenum transporter; TIGRFAM: Molybdate ABC transporter, permease; PFAM: Binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter permease complement(2286502..2287185) Methylomonas methanica MC09 10672087 YP_004512992.1 CDS Metme_2088 NC_015572.1 2287192 2287956 R KEGG: har:HEAR3439 molybdate-binding periplasmic protein precursor; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1; molybdenum ABC transporter periplasmic molybdate-binding protein complement(2287192..2287956) Methylomonas methanica MC09 10672088 YP_004512993.1 CDS Metme_2089 NC_015572.1 2288004 2289488 R KEGG: mex:Mext_1519 hypothetical protein; hypothetical protein complement(2288004..2289488) Methylomonas methanica MC09 10672089 YP_004512994.1 CDS Metme_2090 NC_015572.1 2289856 2290392 D KEGG: mca:MCA0665 glycine cleavage system transcriptional repressor; glycine cleavage system transcriptional repressor 2289856..2290392 Methylomonas methanica MC09 10672090 YP_004512995.1 CDS Metme_2091 NC_015572.1 2290397 2290864 D PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: kko:Kkor_1628 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 2290397..2290864 Methylomonas methanica MC09 10672091 YP_004512996.1 CDS Metme_2092 NC_015572.1 2290873 2291361 R PFAM: SEC-C motif; KEGG: nwa:Nwat_1183 sec-C motif domain-containing protein; SEC-C motif domain-containing protein complement(2290873..2291361) Methylomonas methanica MC09 10672092 YP_004512997.1 CDS Metme_2093 NC_015572.1 2291461 2292687 D PFAM: Sodium:dicarboxylate symporter; KEGG: meh:M301_0255 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 2291461..2292687 Methylomonas methanica MC09 10672093 YP_004512998.1 CDS Metme_2094 NC_015572.1 2292835 2295339 D PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: plm:Plim_2493 membrane protein-like protein; hypothetical protein 2292835..2295339 Methylomonas methanica MC09 10672094 YP_004512999.1 CDS Metme_2095 NC_015572.1 2295336 2296682 D KEGG: hypothetical protein; hypothetical protein 2295336..2296682 Methylomonas methanica MC09 10672095 YP_004513000.1 CDS Metme_2096 NC_015572.1 2296733 2297587 R PFAM: Metal-dependent hydrolase HDOD; KEGG: tgr:Tgr7_3043 signal transduction protein; signal transduction protein complement(2296733..2297587) Methylomonas methanica MC09 10672096 YP_004513001.1 CDS Metme_2097 NC_015572.1 2297596 2302629 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: dat:HRM2_43250 sensory box histidine kinase/response regulator; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase complement(2297596..2302629) Methylomonas methanica MC09 10672097 YP_004513002.1 CDS Metme_2098 NC_015572.1 2302632 2303180 R KEGG: dat:HRM2_43260 hypothetical protein; hypothetical protein complement(2302632..2303180) Methylomonas methanica MC09 10672098 YP_004513003.1 CDS Metme_2099 NC_015572.1 2303184 2305208 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: gme:Gmet_1669 TonB-dependent receptor, plug; TonB-dependent receptor plug complement(2303184..2305208) Methylomonas methanica MC09 10672099 YP_004513004.1 CDS Metme_2100 NC_015572.1 2305840 2306151 D hypothetical protein 2305840..2306151 Methylomonas methanica MC09 10672100 YP_004513005.1 CDS Metme_2101 NC_015572.1 2306256 2307680 R PFAM: Aminotransferase, class I/II; HTH transcriptional regulator, GntR; KEGG: cja:CJA_1192 transcriptional regulator, GntR family/aminotransferase class-I; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(2306256..2307680) Methylomonas methanica MC09 10672101 YP_004513006.1 CDS Metme_2102 NC_015572.1 2307827 2308621 D manually curated; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: opr:Ocepr_0008 phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family 2307827..2308621 Methylomonas methanica MC09 10672102 YP_004513007.1 CDS Metme_2103 NC_015572.1 2308736 2309608 D TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: sde:Sde_3057 branched chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; branched-chain amino acid aminotransferase 2308736..2309608 Methylomonas methanica MC09 10672103 YP_004513008.1 CDS Metme_2104 NC_015572.1 2309771 2310067 D KEGG: neu:NE1551 hypothetical protein; hypothetical protein 2309771..2310067 Methylomonas methanica MC09 10672104 YP_004513009.1 CDS Metme_2105 NC_015572.1 2310174 2310650 D PFAM: Cupin 2, conserved barrel; KEGG: app:CAP2UW1_1944 cupin 2 conserved barrel domain protein; cupin 2310174..2310650 Methylomonas methanica MC09 10672105 YP_004513010.1 CDS Metme_2106 NC_015572.1 2310852 2312198 D KEGG: amr:AM1_2928 hypothetical protein; hypothetical protein 2310852..2312198 Methylomonas methanica MC09 10672106 YP_004513011.1 CDS Metme_2107 NC_015572.1 2312289 2312726 R hypothetical protein complement(2312289..2312726) Methylomonas methanica MC09 10672107 YP_004513012.1 CDS Metme_2108 NC_015572.1 2312989 2313183 R hypothetical protein complement(2312989..2313183) Methylomonas methanica MC09 10672108 YP_004513013.1 CDS Metme_2109 NC_015572.1 2313475 2314176 R SMART: HTH transcriptional regulator, DeoR N-terminal; KEGG: azl:AZL_004070 transcriptional regulator; regulatory protein DeoR complement(2313475..2314176) Methylomonas methanica MC09 10672109 YP_004513014.1 CDS Metme_2110 NC_015572.1 2314201 2314575 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azl:AZL_004080 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(2314201..2314575) Methylomonas methanica MC09 10672110 YP_004513015.1 CDS Metme_2111 NC_015572.1 2315140 2315934 D KEGG: pap:PSPA7_5593 hypothetical protein; hypothetical protein 2315140..2315934 Methylomonas methanica MC09 10672111 YP_004513016.1 CDS Metme_2112 NC_015572.1 2316128 2316931 R PFAM: Methyltransferase type 11; KEGG: mac:MA1801 hypothetical protein; type 11 methyltransferase complement(2316128..2316931) Methylomonas methanica MC09 10672112 YP_004513017.1 CDS Metme_2113 NC_015572.1 2316946 2318679 R TIGRFAM: Yeast 2-isopropylmalate synthase; KEGG: app:CAP2UW1_2224 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; 2-isopropylmalate synthase complement(2316946..2318679) Methylomonas methanica MC09 10672113 YP_004513018.1 CDS Metme_2114 NC_015572.1 2318843 2319316 D KEGG: app:CAP2UW1_2225 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; AsnC family transcriptional regulator 2318843..2319316 Methylomonas methanica MC09 10672114 YP_004513019.1 CDS Metme_2115 NC_015572.1 2319541 2320185 D KEGG: ava:Ava_0113 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD superfamily hydrolase 2319541..2320185 Methylomonas methanica MC09 10672115 YP_004513020.1 CDS Metme_2116 NC_015572.1 2320212 2320403 D hypothetical protein 2320212..2320403 Methylomonas methanica MC09 10672116 YP_004513021.1 CDS Metme_2117 NC_015572.1 2320424 2320975 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: nde:NIDE3505 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2320424..2320975 Methylomonas methanica MC09 10672117 YP_004513022.1 CDS Metme_2118 NC_015572.1 2321293 2321922 D PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: asa:ASA_3408 TetR family transcriptional regulator; TetR family transcriptional regulator 2321293..2321922 Methylomonas methanica MC09 10672118 YP_004513023.1 CDS Metme_2119 NC_015572.1 2321922 2323037 D PFAM: O-methyltransferase, family 2; KEGG: rme:Rmet_5070 O-methyltransferase 2; O-methyltransferase 2 2321922..2323037 Methylomonas methanica MC09 10672119 YP_004513024.1 CDS Metme_2120 NC_015572.1 2323167 2323715 D hypothetical protein 2323167..2323715 Methylomonas methanica MC09 10672120 YP_004513025.1 CDS Metme_2121 NC_015572.1 2323869 2325083 D KEGG: app:CAP2UW1_1742 hypothetical protein; hypothetical protein 2323869..2325083 Methylomonas methanica MC09 10672121 YP_004513026.1 CDS Metme_2122 NC_015572.1 2325162 2326448 R KEGG: neu:NE0879 esterase/lipase/thioesterase lipase; esterase complement(2325162..2326448) Methylomonas methanica MC09 10672122 YP_004513027.1 CDS Metme_2123 NC_015572.1 2326675 2327202 D PFAM: Polyketide cyclase/dehydrase; KEGG: plm:Plim_1249 hypothetical protein; polyketide cyclase/dehydrase 2326675..2327202 Methylomonas methanica MC09 10672123 YP_004513028.1 CDS Metme_2124 NC_015572.1 2327384 2327917 D KEGG: azo:azo1214 hypothetical protein; hypothetical protein 2327384..2327917 Methylomonas methanica MC09 10672124 YP_004513029.1 CDS Metme_2125 NC_015572.1 2328245 2328715 D hypothetical protein 2328245..2328715 Methylomonas methanica MC09 10672125 YP_004513030.1 CDS Metme_2126 NC_015572.1 2328731 2328904 D hypothetical protein 2328731..2328904 Methylomonas methanica MC09 10672126 YP_004513031.1 CDS Metme_2127 NC_015572.1 2329146 2329256 R manually curated; KEGG: sbp:Sbal223_3827 hypothetical protein; hypothetical protein complement(2329146..2329256) Methylomonas methanica MC09 10672127 YP_004513032.1 CDS Metme_2128 NC_015572.1 2329402 2329635 R PFAM: Protein of unknown function DUF2132; KEGG: ypb:YPTS_1267 hypothetical protein; hypothetical protein complement(2329402..2329635) Methylomonas methanica MC09 10672128 YP_004513033.1 CDS Metme_2129 NC_015572.1 2329628 2329891 R KEGG: mmw:Mmwyl1_1536 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1; RNP-1 like RNA-binding protein complement(2329628..2329891) Methylomonas methanica MC09 10672129 YP_004513034.1 CDS Metme_2130 NC_015572.1 2330113 2332653 D KEGG: gob:Gobs_2142 40-residue YVTN family beta-propeller repeat-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; peptidoglycan-binding lysin domain-containing protein 2330113..2332653 Methylomonas methanica MC09 10672130 YP_004513035.1 CDS Metme_2131 NC_015572.1 2332756 2333112 D KEGG: type VI secretion system vgr family protein; type VI secretion system vgr family protein 2332756..2333112 Methylomonas methanica MC09 10672131 YP_004513036.1 CDS Metme_2132 NC_015572.1 2333192 2334040 R KEGG: npu:Npun_R4418 hypothetical protein; hypothetical protein complement(2333192..2334040) Methylomonas methanica MC09 10672132 YP_004513037.1 CDS Metme_2133 NC_015572.1 2334301 2335014 R KEGG: ttu:TERTU_2610 transcriptional activator protein anr; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(2334301..2335014) Methylomonas methanica MC09 10672133 YP_004513038.1 CDS Metme_2134 NC_015572.1 2335394 2336548 D PFAM: FIST C domain; FIST domain, N-terminal; KEGG: slt:Slit_1459 FIST C domain protein; FIST C domain-containing protein 2335394..2336548 Methylomonas methanica MC09 10672134 YP_004513039.1 CDS Metme_2135 NC_015572.1 2336545 2338407 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: slt:Slit_1460 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase 2336545..2338407 Methylomonas methanica MC09 10672135 YP_004513040.1 CDS Metme_2136 NC_015572.1 2338437 2341571 R KEGG: sse:Ssed_0651 metal dependent phosphohydrolase; PFAM: Extracellular solute-binding protein, family 3; HAMP linker domain; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Extracellular solute-binding protein, family 3; Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(2338437..2341571) Methylomonas methanica MC09 10672136 YP_004513041.1 CDS Metme_2137 NC_015572.1 2341986 2343293 D TIGRFAM: Citrate synthase, type II; KEGG: alv:Alvin_3052 citrate synthase I; PFAM: Citrate synthase-like; citrate synthase I 2341986..2343293 Methylomonas methanica MC09 10672137 YP_004513042.1 CDS Metme_2138 NC_015572.1 2343309 2343479 D PFAM: Protein of unknown function DUF1674; KEGG: sbi:SORBI_10g003960 hypothetical protein; hypothetical protein 2343309..2343479 Methylomonas methanica MC09 10672138 YP_004513043.1 CDS Metme_2139 NC_015572.1 2343513 2343884 D KEGG: azl:AZL_001730 succinate dehydrogenase cytochrome b-556 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 2343513..2343884 Methylomonas methanica MC09 10672139 YP_004513044.1 CDS Metme_2140 NC_015572.1 2343897 2344277 D KEGG: apt:APA01_00320 succinate dehydrogenase membrane anchor subunit; TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; PFAM: Succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, hydrophobic membrane anchor protein 2343897..2344277 Methylomonas methanica MC09 10672140 YP_004513045.1 CDS Metme_2141 NC_015572.1 2344281 2346065 D TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: mca:MCA1550 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase, flavoprotein subunit 2344281..2346065 Methylomonas methanica MC09 10672141 YP_004513046.1 CDS Metme_2142 NC_015572.1 2346065 2346847 D KEGG: aeh:Mlg_1335 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 2346065..2346847 Methylomonas methanica MC09 10672142 YP_004513047.1 CDS Metme_2143 NC_015572.1 2346844 2347089 D PFAM: Protein of unknown function DUF339; KEGG: xac:XAC2079 hypothetical protein; hypothetical protein 2346844..2347089 Methylomonas methanica MC09 10672143 YP_004513048.1 CDS Metme_2144 NC_015572.1 2347130 2348299 D hypothetical protein 2347130..2348299 Methylomonas methanica MC09 10672144 YP_004513049.1 CDS Metme_2145 NC_015572.1 2348761 2349180 R KEGG: hch:HCH_05926 Tfp pilus assembly protein PilE; Tfp pilus assembly protein PilE complement(2348761..2349180) Methylomonas methanica MC09 10672145 YP_004513050.1 CDS Metme_2146 NC_015572.1 2349249 2353739 R PFAM: Neisseria PilC; KEGG: nhl:Nhal_0907 fimbrial assembly protein; PilC domain-containing protein complement(2349249..2353739) Methylomonas methanica MC09 10672146 YP_004513051.1 CDS Metme_2147 NC_015572.1 2353786 2354304 R KEGG: pca:Pcar_2156 Tfp pilus assembly protein PilX; Tfp pilus assembly protein PilX complement(2353786..2354304) Methylomonas methanica MC09 10672147 YP_004513052.1 CDS Metme_2148 NC_015572.1 2354318 2355358 R KEGG: nhl:Nhal_0908 type IV pilus assembly protein PilW; type IV pilus assembly protein PilW complement(2354318..2355358) Methylomonas methanica MC09 10672148 YP_004513053.1 CDS Metme_2149 NC_015572.1 2355355 2355852 R TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: nhl:Nhal_0911 type IV pilus modification protein PilV; type IV pilus modification protein PilV complement(2355355..2355852) Methylomonas methanica MC09 10672149 YP_004513054.1 CDS Metme_2150 NC_015572.1 2355843 2356418 R KEGG: pca:Pcar_2159 Tfp pilus assembly protein FimT; Tfp pilus assembly protein FimT complement(2355843..2356418) Methylomonas methanica MC09 10672150 YP_004513055.1 CDS Metme_2151 NC_015572.1 2356875 2357237 D KEGG: hch:HCH_00454 CheY-like receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 2356875..2357237 Methylomonas methanica MC09 10672151 YP_004513056.1 CDS Metme_2152 NC_015572.1 2357268 2359325 D KEGG: hha:Hhal_2167 CheA signal transduction histidine kinases; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like; CheA signal transduction histidine kinase 2357268..2359325 Methylomonas methanica MC09 10672152 YP_004513057.1 CDS Metme_2153 NC_015572.1 2359336 2359875 D KEGG: sde:Sde_3106 biotin synthase; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 2359336..2359875 Methylomonas methanica MC09 10672153 YP_004513058.1 CDS Metme_2154 NC_015572.1 2360025 2362223 D TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: meh:M301_0856 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; PAC motif; PAS; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 2360025..2362223 Methylomonas methanica MC09 10672154 YP_004513059.1 CDS Metme_2155 NC_015572.1 2362264 2362776 D KEGG: ttu:TERTU_1340 purine-binding chemotaxis protein CheW; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 2362264..2362776 Methylomonas methanica MC09 10672155 YP_004513060.1 CDS Metme_2156 NC_015572.1 2362773 2363534 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: hha:Hhal_2164 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 2362773..2363534 Methylomonas methanica MC09 10672156 YP_004513061.1 CDS Metme_2157 NC_015572.1 2363534 2364070 D KEGG: sde:Sde_3109 hypothetical protein; hypothetical protein 2363534..2364070 Methylomonas methanica MC09 10672157 YP_004513062.1 CDS Metme_2158 NC_015572.1 2364115 2364957 D PFAM: MCP methyltransferase, CheR-type; KEGG: tcx:Tcr_0757 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type; chemotaxis protein CheR 2364115..2364957 Methylomonas methanica MC09 10672158 YP_004513063.1 CDS Metme_2159 NC_015572.1 2364954 2365592 D HAMAP: Chemoreceptor glutamine deamidase cheD; KEGG: hha:Hhal_2161 chemoreceptor glutamine deamidase CheD; PFAM: Chemoreceptor glutamine deamidase cheD; protein CheD 2364954..2365592 Methylomonas methanica MC09 10672159 YP_004513064.1 CDS Metme_2160 NC_015572.1 2365600 2366655 D SMART: Signal transduction response regulator, receiver region; HAMAP: Chemotaxis response regulator protein-glutamate methylesterase; KEGG: xac:XAC1888 chemotaxis-specific methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver region; response regulator receiver modulated CheB methylesterase 2365600..2366655 Methylomonas methanica MC09 10672160 YP_004513065.1 CDS Metme_2161 NC_015572.1 2366663 2367868 D KEGG: mgm:Mmc1_3578 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer 2366663..2367868 Methylomonas methanica MC09 10672161 YP_004513066.1 CDS Metme_2162 NC_015572.1 2367900 2368199 D PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: gpb:HDN1F_31750 hypothetical protein; sulfate transporter/antisigma-factor antagonist STAS 2367900..2368199 Methylomonas methanica MC09 10672162 YP_004513067.1 CDS Metme_2163 NC_015572.1 2368264 2369385 D PFAM: Uncharacterised protein family UPF0118; KEGG: mca:MCA0662 permease; hypothetical protein 2368264..2369385 Methylomonas methanica MC09 10672163 YP_004513068.1 CDS Metme_2164 NC_015572.1 2369364 2370779 R KEGG: mca:MCA0663 PhoH family protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; PhoH family protein complement(2369364..2370779) Methylomonas methanica MC09 10672164 YP_004513069.1 CDS Metme_2165 NC_015572.1 2370994 2371533 D KEGG: dol:Dole_0882 hypothetical protein; hypothetical protein 2370994..2371533 Methylomonas methanica MC09 10672165 YP_004513070.1 CDS Metme_2166 NC_015572.1 2371559 2372230 D KEGG: tgr:Tgr7_1408 TPR repeat-containing protein; hypothetical protein 2371559..2372230 Methylomonas methanica MC09 10672166 YP_004513071.1 CDS Metme_2167 NC_015572.1 2372246 2374168 D SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; Helicase-like, DEXD box c2 type; KEGG: mca:MCA1991 ATP-dependent helicase; helicase c2 2372246..2374168 Methylomonas methanica MC09 10672167 YP_004513072.1 CDS Metme_2168 NC_015572.1 2374165 2374848 D KEGG: tgr:Tgr7_1410 peptidase M22 glycoprotease; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease; hypothetical protein 2374165..2374848 Methylomonas methanica MC09 10672168 YP_004513073.1 CDS Metme_2169 NC_015572.1 2374885 2375508 D KEGG: mmw:Mmwyl1_3395 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein 2374885..2375508 Methylomonas methanica MC09 10672169 YP_004513074.1 CDS Metme_2170 NC_015572.1 2375511 2376164 D PFAM: Peptidase M50; KEGG: dak:DaAHT2_0739 peptidase M50; peptidase M50 2375511..2376164 Methylomonas methanica MC09 10672170 YP_004513075.1 CDS Metme_2171 NC_015572.1 2376193 2377032 D KEGG: tgr:Tgr7_2013 hypothetical protein; HAMAP: Segregation and condensation protein A; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; segregation and condensation protein A 2376193..2377032 Methylomonas methanica MC09 10672171 YP_004513076.1 CDS Metme_2172 NC_015572.1 2377013 2378014 D KEGG: tgr:Tgr7_2012 segregation and condensation protein B; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; chromosome segregation and condensation protein ScpB 2377013..2378014 Methylomonas methanica MC09 10672172 YP_004513077.1 CDS Metme_2173 NC_015572.1 2378049 2378759 D TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: maq:Maqu_1162 RNA-binding S4 domain-containing protein; SMART: RNA-binding S4; pseudouridine synthase 2378049..2378759 Methylomonas methanica MC09 10672173 YP_004513078.1 CDS Metme_2174 NC_015572.1 2378950 2379828 D KEGG: tbd:Tbd_1803 hypothetical protein; hypothetical protein 2378950..2379828 Methylomonas methanica MC09 10672174 YP_004513079.1 CDS Metme_2175 NC_015572.1 2379945 2380751 R KEGG: sdn:Sden_0659 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein complement(2379945..2380751) Methylomonas methanica MC09 10672175 YP_004513080.1 CDS Metme_2176 NC_015572.1 2380810 2381376 D PFAM: Protein of unknown function DUF447; KEGG: mfa:Mfla_1580 hypothetical protein; hypothetical protein 2380810..2381376 Methylomonas methanica MC09 10672176 YP_004513081.1 CDS Metme_2177 NC_015572.1 2381373 2382113 D PFAM: Protein of unknown function DUF556; KEGG: mca:MCA1243 hypothetical protein; hypothetical protein 2381373..2382113 Methylomonas methanica MC09 10672177 YP_004513082.1 CDS Metme_2179 NC_015572.1 2382290 2383378 D TIGRFAM: Glycine cleavage system T protein; KEGG: hch:HCH_03858 glycine cleavage system T protein; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; glycine cleavage system T protein 2382290..2383378 Methylomonas methanica MC09 10672179 YP_004513083.1 CDS Metme_2180 NC_015572.1 2383381 2386281 D TIGRFAM: Glycine cleavage system P-protein; HAMAP: Glycine cleavage system P-protein; KEGG: rpx:Rpdx1_1499 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; Aromatic amino acid beta-eliminating lyase/threonine aldolase; Glycine dehydrogenase 2383381..2386281 Methylomonas methanica MC09 10672180 YP_004513084.1 CDS Metme_2181 NC_015572.1 2386456 2386599 R hypothetical protein complement(2386456..2386599) Methylomonas methanica MC09 10672181 YP_004513085.1 CDS Metme_2182 NC_015572.1 2386807 2387499 D KEGG: yps:YPTB0221 cell division protein; hypothetical protein 2386807..2387499 Methylomonas methanica MC09 10672182 YP_004513086.1 CDS Metme_2183 NC_015572.1 2387947 2388168 D hypothetical protein 2387947..2388168 Methylomonas methanica MC09 10672183 YP_004513087.1 CDS Metme_2184 NC_015572.1 2388296 2389969 R HAMAP: Formate-tetrahydrofolate ligase, FTHFS; KEGG: mca:MCA2219 formate--tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS; Formate--tetrahydrofolate ligase complement(2388296..2389969) Methylomonas methanica MC09 10672184 YP_004513088.1 CDS Metme_2185 NC_015572.1 2390080 2390757 R PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: mfa:Mfla_0507 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein complement(2390080..2390757) Methylomonas methanica MC09 10672185 YP_004513089.1 CDS Metme_2186 NC_015572.1 2390909 2391487 D KEGG: bam:Bamb_4195 MobA-like protein-like protein; MobA-like protein 2390909..2391487 Methylomonas methanica MC09 10672186 YP_004513090.1 CDS Metme_2187 NC_015572.1 2391494 2392315 D PFAM: XdhC- CoxI; KEGG: aeh:Mlg_1569 hypothetical protein; XshC-Cox1-family protein 2391494..2392315 Methylomonas methanica MC09 10672187 YP_004513091.1 CDS Metme_2188 NC_015572.1 2392403 2392870 D KEGG: har:HEAR1179 isoquinoline 1-oxidoreductase alpha subunit; PFAM: [2Fe-2S]-binding; Ferredoxin; Isoquinoline 1-oxidoreductase 2392403..2392870 Methylomonas methanica MC09 10672188 YP_004513092.1 CDS Metme_2189 NC_015572.1 2392867 2395200 D KEGG: pap:PSPA7_2883 aldehyde dehydrogenase; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; aldehyde dehydrogenase 2392867..2395200 Methylomonas methanica MC09 10672189 YP_004513093.1 CDS Metme_2190 NC_015572.1 2395647 2396096 D KEGG: nmu:Nmul_A0976 hypothetical protein; hypothetical protein 2395647..2396096 Methylomonas methanica MC09 10672190 YP_004513094.1 CDS Metme_2191 NC_015572.1 2396105 2396530 R PFAM: Histidine triad (HIT) protein; KEGG: mmw:Mmwyl1_2336 histidine triad (HIT) protein; histidine triad (HIT) protein complement(2396105..2396530) Methylomonas methanica MC09 10672191 YP_004513095.1 CDS Metme_2192 NC_015572.1 2396683 2397732 D hypothetical protein 2396683..2397732 Methylomonas methanica MC09 10672192 YP_004513096.1 CDS Metme_2193 NC_015572.1 2397733 2398515 R KEGG: tva:TVAG_460570 hypothetical protein; hypothetical protein complement(2397733..2398515) Methylomonas methanica MC09 10672193 YP_004513097.1 CDS Metme_2194 NC_015572.1 2398773 2398982 R PFAM: Dodecin flavoprotein; KEGG: brh:RBRH_04236 hypothetical cytosolic protein; hypothetical protein complement(2398773..2398982) Methylomonas methanica MC09 10672194 YP_004513098.1 CDS Metme_2195 NC_015572.1 2398998 2399615 R TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: alv:Alvin_0104 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(2398998..2399615) Methylomonas methanica MC09 10672195 YP_004513099.1 CDS Metme_2196 NC_015572.1 2399612 2400397 R KEGG: tgr:Tgr7_2419 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase complement(2399612..2400397) Methylomonas methanica MC09 10672196 YP_004513100.1 CDS Metme_2197 NC_015572.1 2400394 2402349 R PFAM: NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; BRCT; KEGG: dps:DP1006 NAD-dependent DNA ligase; SMART: NAD-dependent DNA ligase, N-terminal; BRCT; DNA ligase (NAD(+)) complement(2400394..2402349) Methylomonas methanica MC09 10672197 YP_004513101.1 CDS Metme_2198 NC_015572.1 2402554 2403042 R KEGG: mca:MCA2322 transctiptional regulator; transctiptional regulator complement(2402554..2403042) Methylomonas methanica MC09 10672198 YP_004513102.1 CDS Metme_2199 NC_015572.1 2403284 2404522 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: sku:Sulku_1101 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 2403284..2404522 Methylomonas methanica MC09 10672199 YP_004513103.1 CDS Metme_2200 NC_015572.1 2404600 2407335 R TIGRFAM: Pyruvate, phosphate dikinase; KEGG: mca:MCA3020 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme; pyruvate, phosphate dikinase complement(2404600..2407335) Methylomonas methanica MC09 10672200 YP_004513104.1 CDS Metme_2201 NC_015572.1 2407559 2408041 R PFAM: Pyrrolo-quinoline quinone repeat; pyrrolo-quinoline quinone repeat-containing protein complement(2407559..2408041) Methylomonas methanica MC09 10672201 YP_004513105.1 CDS Metme_2202 NC_015572.1 2408078 2409094 R hypothetical protein complement(2408078..2409094) Methylomonas methanica MC09 10672202 YP_004513106.1 CDS Metme_2203 NC_015572.1 2409681 2410115 D PFAM: Transposase IS200-like; KEGG: eba:ebA563 transposition helper protein; transposase IS200-family protein 2409681..2410115 Methylomonas methanica MC09 10672203 YP_004513107.1 CDS Metme_2204 NC_015572.1 2410243 2411160 R KEGG: bpf:BpOF4_06025 hypothetical protein; hypothetical protein complement(2410243..2411160) Methylomonas methanica MC09 10672204 YP_004513108.1 CDS Metme_2205 NC_015572.1 2411208 2412323 R PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein complement(2411208..2412323) Methylomonas methanica MC09 10672205 YP_004513109.1 CDS Metme_2206 NC_015572.1 2412832 2414967 R HAMAP: UPF0313 protein ygiQ; PFAM: Radical SAM N-terminal; Radical SAM; KEGG: mca:MCA0293 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein complement(2412832..2414967) Methylomonas methanica MC09 10672206 YP_004513110.1 CDS Metme_2207 NC_015572.1 2414964 2415767 R PFAM: Spermine synthase; KEGG: mca:MCA1034 hypothetical protein; spermine synthase complement(2414964..2415767) Methylomonas methanica MC09 10672207 YP_004513111.1 CDS Metme_2208 NC_015572.1 2415932 2417227 R KEGG: swi:Swit_2398 hypothetical protein; hypothetical protein complement(2415932..2417227) Methylomonas methanica MC09 10672208 YP_004513112.1 CDS Metme_2209 NC_015572.1 2417363 2418445 R PFAM: Amine oxidase; KEGG: mca:MCA2837 amine oxidase; amine oxidase complement(2417363..2418445) Methylomonas methanica MC09 10672209 YP_004513113.1 CDS Metme_2210 NC_015572.1 2418449 2419384 R hypothetical protein complement(2418449..2419384) Methylomonas methanica MC09 10672210 YP_004513114.1 CDS Metme_2211 NC_015572.1 2419719 2420102 D hypothetical protein 2419719..2420102 Methylomonas methanica MC09 10672211 YP_004513115.1 CDS Metme_2212 NC_015572.1 2420120 2420773 D KEGG: mca:MCA1304 hypothetical protein; hypothetical protein 2420120..2420773 Methylomonas methanica MC09 10672212 YP_004513116.1 CDS Metme_2213 NC_015572.1 2420770 2422611 D KEGG: mca:MCA1305 DnaK-related protein; molecular chaperone DnaK 2420770..2422611 Methylomonas methanica MC09 10672213 YP_004513117.1 CDS Metme_2214 NC_015572.1 2422666 2423547 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Rickettsia 17kDa surface antigen; KEGG: hel:HELO_4468 OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(2422666..2423547) Methylomonas methanica MC09 10672214 YP_004513118.1 CDS Metme_2215 NC_015572.1 2423663 2424484 R PFAM: MOSC, N-terminal beta barrel; Molybdenum cofactor sulfurase, C-terminal; KEGG: MOSC domain-containing protein; MOSC domain-containing protein beta barrel domain-containing protein complement(2423663..2424484) Methylomonas methanica MC09 10672215 YP_004513119.1 CDS Metme_2216 NC_015572.1 2424503 2424919 R PFAM: Type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(2424503..2424919) Methylomonas methanica MC09 10672216 YP_004513120.1 CDS Metme_2217 NC_015572.1 2425061 2426224 D TIGRFAM: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system; KEGG: mca:MCA1278 hypothetical protein; ABC transporter substrate binding protein 2425061..2426224 Methylomonas methanica MC09 10672217 YP_004513121.1 CDS Metme_2218 NC_015572.1 2426366 2427331 D TIGRFAM: PQQ-dependent catabolism-associated beta-propeller protein; YVTN beta-propeller repeat; KEGG: mca:MCA1279 hypothetical protein; PQQ-dependent catabolism-associated beta-propeller protein 2426366..2427331 Methylomonas methanica MC09 10672218 YP_004513122.1 CDS Metme_2219 NC_015572.1 2427307 2428068 D SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system; KEGG: mca:MCA1280 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; ABC transporter ATP-binding protein 2427307..2428068 Methylomonas methanica MC09 10672219 YP_004513123.1 CDS Metme_2220 NC_015572.1 2428065 2428871 D KEGG: mca:MCA1281 ABC transporter, permease; TIGRFAM: alcohol ABC transporter, permease; PFAM: ABC-2 type transporter; alcohol ABC transporter permease 2428065..2428871 Methylomonas methanica MC09 10672220 YP_004513124.1 CDS Metme_2221 NC_015572.1 2428980 2429699 R PFAM: Peptidase M50; KEGG: rpf:Rpic12D_2396 peptidase M50; peptidase M50 complement(2428980..2429699) Methylomonas methanica MC09 10672221 YP_004513125.1 CDS Metme_2222 NC_015572.1 2430177 2431184 D KEGG: tmz:Tmz1t_1472 hypothetical protein; hypothetical protein 2430177..2431184 Methylomonas methanica MC09 10672222 YP_004513126.1 CDS Metme_2223 NC_015572.1 2431369 2431545 R PFAM: CsbD-like; KEGG: dar:Daro_2060 CsbD-like; CsbD family protein complement(2431369..2431545) Methylomonas methanica MC09 10672223 YP_004513127.1 CDS Metme_2224 NC_015572.1 2431711 2440419 R PFAM: Glycosyltransferase 36; carbohydrate binding; Glycosyltransferase 36 associated; KEGG: mms:mma_1954 cyclic beta 1-2 glucan synthetase; glycosyltransferase complement(2431711..2440419) Methylomonas methanica MC09 10672224 YP_004513128.1 CDS Metme_2225 NC_015572.1 2440699 2440857 R KEGG: sbp:Sbal223_2127 hypothetical protein; hypothetical protein complement(2440699..2440857) Methylomonas methanica MC09 10672225 YP_004513129.1 CDS Metme_2226 NC_015572.1 2440936 2441067 R KEGG: sno:Snov_4005 hypothetical protein; hypothetical protein complement(2440936..2441067) Methylomonas methanica MC09 10672226 YP_004513130.1 CDS Metme_2227 NC_015572.1 2441305 2441502 R hypothetical protein complement(2441305..2441502) Methylomonas methanica MC09 10672227 YP_004513131.1 CDS Metme_2228 NC_015572.1 2441697 2442530 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tbd:Tbd_0244 outer membrane protein; OmpA/MotB domain-containing protein complement(2441697..2442530) Methylomonas methanica MC09 10672228 YP_004513132.1 CDS Metme_2229 NC_015572.1 2442549 2442941 R KEGG: tbd:Tbd_0243 hypothetical protein; hypothetical protein complement(2442549..2442941) Methylomonas methanica MC09 10672229 YP_004513133.1 CDS Metme_2230 NC_015572.1 2443303 2443854 D KEGG: meh:M301_0483 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 2443303..2443854 Methylomonas methanica MC09 10672230 YP_004513134.1 CDS Metme_2231 NC_015572.1 2443915 2444982 R PFAM: Integrase, catalytic core; KEGG: azl:AZL_b03960 transposase; integrase catalytic subunit complement(2443915..2444982) Methylomonas methanica MC09 10672231 YP_004513135.1 CDS Metme_2232 NC_015572.1 2445195 2445290 R hypothetical protein complement(2445195..2445290) Methylomonas methanica MC09 10672232 YP_004513136.1 CDS Metme_2233 NC_015572.1 2445290 2446894 R KEGG: vsp:VS_1816 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase complement(2445290..2446894) Methylomonas methanica MC09 10672233 YP_004513137.1 CDS Metme_2234 NC_015572.1 2446884 2448116 R KEGG: nde:NIDE2119 histidine kinase; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; Protein phosphatase 2C-related; response regulator receiver modulated protein serine/threonine phosphatase complement(2446884..2448116) Methylomonas methanica MC09 10672234 YP_004513138.1 CDS Metme_2235 NC_015572.1 2448119 2449345 R KEGG: dma:DMR_27280 response regulator receiver protein; PFAM: Metal-dependent hydrolase HDOD; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver modulated metal dependent hydrolase complement(2448119..2449345) Methylomonas methanica MC09 10672235 YP_004513139.1 CDS Metme_2236 NC_015572.1 2449359 2450789 R TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; KEGG: dma:DMR_27290 sensor histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; multi-sensor signal transduction histidine kinase complement(2449359..2450789) Methylomonas methanica MC09 10672236 YP_004513140.1 CDS Metme_2237 NC_015572.1 2451020 2451520 R PFAM: SmpA/OmlA; KEGG: mca:MCA2622 small protein A; SmpA/OmlA domain-containing protein complement(2451020..2451520) Methylomonas methanica MC09 10672237 YP_004513141.1 CDS Metme_2238 NC_015572.1 2451634 2452050 D PFAM: Ferric-uptake regulator; KEGG: mca:MCA2623 ferric uptake regulation protein; Fur family ferric uptake regulator 2451634..2452050 Methylomonas methanica MC09 10672238 YP_004513142.1 CDS Metme_2239 NC_015572.1 2452062 2453309 D KEGG: mca:MCA2624 lipoprotein ABC transporter, permease LolE; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted; lipoprotein releasing system transmembrane protein LolC/E family 2452062..2453309 Methylomonas methanica MC09 10672239 YP_004513143.1 CDS Metme_2240 NC_015572.1 2453302 2453979 D SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: mca:MCA2625 lipoprotein ABC transporter, ATP-binding protein LolD; PFAM: ABC transporter-like; lipoprotein releasing system, ATP-binding protein 2453302..2453979 Methylomonas methanica MC09 10672240 YP_004513144.1 CDS Metme_2241 NC_015572.1 2454086 2454523 R hypothetical protein complement(2454086..2454523) Methylomonas methanica MC09 10672241 YP_004513145.1 CDS Metme_2242 NC_015572.1 2454715 2455230 R PFAM: Protein of unknown function DUF2062; KEGG: avn:Avin_14720 hypothetical protein; hypothetical protein complement(2454715..2455230) Methylomonas methanica MC09 10672242 YP_004513146.1 CDS Metme_2243 NC_015572.1 2455335 2456624 R PFAM: PepSY-associated TM helix; KEGG: mca:MCA1027 hypothetical protein; PepSY-associated TM helix domain-containing protein complement(2455335..2456624) Methylomonas methanica MC09 10672243 YP_004513147.1 CDS Metme_2244 NC_015572.1 2456751 2459009 D KEGG: mca:MCA2627 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 2456751..2459009 Methylomonas methanica MC09 10672244 YP_004513148.1 CDS Metme_2245 NC_015572.1 2459033 2459476 R PFAM: Dynein light chain-related; Roadblock/LC7 family protein complement(2459033..2459476) Methylomonas methanica MC09 10672245 YP_004513149.1 CDS Metme_2246 NC_015572.1 2459497 2459910 R PFAM: Dynein light chain-related; KEGG: mpi:Mpet_2717 roadblock/LC7 family protein; Roadblock/LC7 family protein complement(2459497..2459910) Methylomonas methanica MC09 10672246 YP_004513150.1 CDS Metme_2247 NC_015572.1 2459948 2460496 R PFAM: 4-vinyl reductase, 4VR; KEGG: hth:HTH_0148 hypothetical protein; 4-vinyl reductase 4VR complement(2459948..2460496) Methylomonas methanica MC09 10672247 YP_004513151.1 CDS Metme_2248 NC_015572.1 2460521 2461270 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: ppn:Palpr_2910 OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(2460521..2461270) Methylomonas methanica MC09 10672248 YP_004513152.1 CDS Metme_2249 NC_015572.1 2461484 2462368 R PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: nmu:Nmul_A2329 fructosamine kinase; fructosamine/Ketosamine-3-kinase complement(2461484..2462368) Methylomonas methanica MC09 10672249 YP_004513153.1 CDS Metme_2250 NC_015572.1 2462372 2464033 R PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase; KEGG: gpb:HDN1F_33480 glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase complement(2462372..2464033) Methylomonas methanica MC09 10672250 YP_004513154.1 CDS Metme_2251 NC_015572.1 2464259 2465113 D KEGG: mca:MCA0136 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-32 subunit RpoH 2464259..2465113 Methylomonas methanica MC09 10672251 YP_004513155.1 CDS Metme_2252 NC_015572.1 2466138 2466806 D PFAM: Protein of unknown function DUF159; KEGG: rxy:Rxyl_0489 hypothetical protein; hypothetical protein 2466138..2466806 Methylomonas methanica MC09 10672253 YP_004513156.1 CDS Metme_2253 NC_015572.1 2466928 2467410 D KEGG: vei:Veis_0127 hypothetical protein; hypothetical protein 2466928..2467410 Methylomonas methanica MC09 10672254 YP_004513157.1 CDS Metme_2254 NC_015572.1 2467367 2468197 R KEGG: vei:Veis_0124 hypothetical protein; hypothetical protein complement(2467367..2468197) Methylomonas methanica MC09 10672255 YP_004513158.1 CDS Metme_2255 NC_015572.1 2468326 2469042 R KEGG: aca:ACP_3139 hypothetical protein; hypothetical protein complement(2468326..2469042) Methylomonas methanica MC09 10672256 YP_004513159.1 CDS Metme_2256 NC_015572.1 2469148 2469789 R hypothetical protein complement(2469148..2469789) Methylomonas methanica MC09 10672257 YP_004513160.1 CDS Metme_2257 NC_015572.1 2469983 2470396 R KEGG: opr:Ocepr_1901 hypothetical protein; hypothetical protein complement(2469983..2470396) Methylomonas methanica MC09 10672258 YP_004513161.1 CDS Metme_2258 NC_015572.1 2470377 2470709 R hypothetical protein complement(2470377..2470709) Methylomonas methanica MC09 10672259 YP_004513162.1 CDS Metme_2259 NC_015572.1 2470706 2471131 R hypothetical protein complement(2470706..2471131) Methylomonas methanica MC09 10672260 YP_004513163.1 CDS Metme_2260 NC_015572.1 2471232 2472059 R PFAM: Protein of unknown function DUF114; KEGG: ppf:Pput_4091 hypothetical protein; hypothetical protein complement(2471232..2472059) Methylomonas methanica MC09 10672261 YP_004513164.1 CDS Metme_2261 NC_015572.1 2472069 2472272 R hypothetical protein complement(2472069..2472272) Methylomonas methanica MC09 10672262 YP_004513165.1 CDS Metme_2262 NC_015572.1 2472774 2473160 R KEGG: gur:Gura_2107 hypothetical protein; hypothetical protein complement(2472774..2473160) Methylomonas methanica MC09 10672263 YP_004513166.1 CDS Metme_2263 NC_015572.1 2473815 2474210 D KEGG: nhl:Nhal_2265 hypothetical protein; hypothetical protein 2473815..2474210 Methylomonas methanica MC09 10672264 YP_004513167.1 CDS Metme_2264 NC_015572.1 2474207 2474383 D hypothetical protein 2474207..2474383 Methylomonas methanica MC09 10672265 YP_004513168.1 CDS Metme_2265 NC_015572.1 2475194 2477281 D PFAM: Methenyltetrahydromethanopterin cyclohydrolase; ATP-grasp fold, DUF201-type; TIGRFAM: Methenyltetrahydromethanopterin cyclohydrolase; HAMAP: Methenyltetrahydromethanopterin cyclohydrolase; KEGG: mca:MCA2863 N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase; methenyltetrahydromethanopterin cyclohydrolase 2475194..2477281 Methylomonas methanica MC09 10672267 YP_004513169.1 CDS Metme_2266 NC_015572.1 2477343 2478257 D KEGG: mca:MCA2864 ribosomal protein S6 modification protein, TIGRFAM: S6 modification enzyme RimK; PFAM: ATP-grasp fold, RimK-type; RimK family alpha-L-glutamate ligase 2477343..2478257 Methylomonas methanica MC09 10672268 YP_004513170.1 CDS Metme_2267 NC_015572.1 2478254 2479114 D PFAM: Triphosphoribosyl-dephospho-CoA protein; KEGG: mca:MCA2865 ATP:dephospho-CoA triphosphoribosyl transferase; triphosphoribosyl-dephospho-CoA protein 2478254..2479114 Methylomonas methanica MC09 10672269 YP_004513171.1 CDS Metme_2268 NC_015572.1 2479208 2479726 D KEGG: mpt:Mpe_A2612 formaldehyde-activating enzyme; TIGRFAM: Formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme; formaldehyde-activating enzyme 2479208..2479726 Methylomonas methanica MC09 10672270 YP_004513172.1 CDS Metme_2269 NC_015572.1 2479782 2480459 R PFAM: Histidine biosynthesis; KEGG: mfa:Mfla_1651 histidine biosynthesis; histidine biosynthesis protein complement(2479782..2480459) Methylomonas methanica MC09 10672271 YP_004513173.1 CDS Metme_2270 NC_015572.1 2480475 2481467 D PFAM: ATP-grasp fold, DUF201-type; KEGG: mca:MCA2868 hypothetical protein; ATP-grasp fold domain-containing protein 2480475..2481467 Methylomonas methanica MC09 10672272 YP_004513174.1 CDS Metme_2271 NC_015572.1 2481477 2482523 D KEGG: mep:MPQ_1555 h4mpt-linked c1 transfer pathway protein; TIGRFAM: Tetrahydromethanopterin-linked C1 transfer pathway, PFAM: Hydantoinase/oxoprolinase; H4MPT-linked C1 transfer pathway protein 2481477..2482523 Methylomonas methanica MC09 10672273 YP_004513175.1 CDS Metme_2272 NC_015572.1 2482601 2483974 D TIGRFAM: Para-aminobenzoate synthase, component I; KEGG: mca:MCA2870 para-aminobenzoate synthase, component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; para-aminobenzoate synthase subunit I 2482601..2483974 Methylomonas methanica MC09 10672274 YP_004513176.1 CDS Metme_2273 NC_015572.1 2483971 2484537 D PFAM: Aspartate/glutamate/uridylate kinase; KEGG: bxe:Bxe_B2457 tetrahydromethanopterin biosynthesis protein, kinase; aspartate/glutamate/uridylate kinase 2483971..2484537 Methylomonas methanica MC09 10672275 YP_004513177.1 CDS Metme_2274 NC_015572.1 2484521 2485183 D KEGG: mca:MCA0520 hypothetical protein; hypothetical protein 2484521..2485183 Methylomonas methanica MC09 10672276 YP_004513178.1 CDS Metme_2275 NC_015572.1 2485186 2485620 R hypothetical protein complement(2485186..2485620) Methylomonas methanica MC09 10672277 YP_004513179.1 CDS Metme_2276 NC_015572.1 2485740 2487482 D PFAM: GTP-binding protein, HSR1-related; KEGG: hypothetical protein; HSR1-like GTP-binding protein 2485740..2487482 Methylomonas methanica MC09 10672278 YP_004513180.1 CDS Metme_2277 NC_015572.1 2487463 2489037 D KEGG: mca:MCA1394 hypothetical protein; hypothetical protein 2487463..2489037 Methylomonas methanica MC09 10672279 YP_004513181.1 CDS Metme_2278 NC_015572.1 2489180 2491135 R PFAM: Glycosyl hydrolase, family 13, catalytic region; KEGG: tcx:Tcr_1797 alpha amylase, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; amylosucrase complement(2489180..2491135) Methylomonas methanica MC09 10672280 YP_004513182.1 CDS Metme_2279 NC_015572.1 2491428 2492180 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: alv:Alvin_2821 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2491428..2492180 Methylomonas methanica MC09 10672281 YP_004513183.1 CDS Metme_2280 NC_015572.1 2492183 2493061 D PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nwa:Nwat_2274 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2492183..2493061 Methylomonas methanica MC09 10672282 YP_004513184.1 CDS Metme_2281 NC_015572.1 2493078 2493674 D PFAM: Type IV pilus assembly PilZ; KEGG: hch:HCH_05860 hypothetical protein; type IV pilus assembly PilZ 2493078..2493674 Methylomonas methanica MC09 10672283 YP_004513185.1 CDS Metme_2282 NC_015572.1 2493725 2493910 D hypothetical protein 2493725..2493910 Methylomonas methanica MC09 10672284 YP_004513186.1 CDS Metme_2283 NC_015572.1 2493976 2494695 R PFAM: Glycoside hydrolase, family 24; SH3, type 3; KEGG: btr:Btr_0306 phage-related lysozyme; SMART: Bacterial SH3-like region; lysozyme complement(2493976..2494695) Methylomonas methanica MC09 10672285 YP_004513187.1 CDS Metme_2284 NC_015572.1 2494833 2496224 R KEGG: mca:MCA2767 NAD(P) transhydrogenase, beta subunit; PFAM: NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase complement(2494833..2496224) Methylomonas methanica MC09 10672286 YP_004513188.1 CDS Metme_2285 NC_015572.1 2496236 2497789 R KEGG: nhl:Nhal_3870 NAD(P) transhydrogenase, alpha subunit; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; NAD(P) transhydrogenase subunit alpha complement(2496236..2497789) Methylomonas methanica MC09 10672287 YP_004513189.1 CDS Metme_2286 NC_015572.1 2497949 2498881 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: cja:CJA_2420 response regulator; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase 2497949..2498881 Methylomonas methanica MC09 10672288 YP_004513190.1 CDS Metme_2287 NC_015572.1 2498878 2499807 D KEGG: nhl:Nhal_0416 hypothetical protein; hypothetical protein 2498878..2499807 Methylomonas methanica MC09 10672289 YP_004513191.1 CDS Metme_2288 NC_015572.1 2499804 2500484 D KEGG: mca:MCA2733 HAD-superfamily hydrolase, subfamily IA, variant 3 family protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD superfamily hydrolase 2499804..2500484 Methylomonas methanica MC09 10672290 YP_004513192.1 CDS Metme_2289 NC_015572.1 2500517 2501476 D KEGG: mca:MCA2861 GHMP family kinase; TIGRFAM: GHMP kinase group 1; PFAM: GHMP kinase; GHMP kinase, C-terminal; beta-ribofuranosylaminobenzene 5'-phosphate synthase 2500517..2501476 Methylomonas methanica MC09 10672291 YP_004513193.1 CDS Metme_2290 NC_015572.1 2501483 2501794 R PFAM: Sulphur oxidation protein SoxZ; KEGG: mca:MCA1989 sulfur compound-chelating protein SoxZ; sulfur oxidation protein SoxZ complement(2501483..2501794) Methylomonas methanica MC09 10672292 YP_004513194.1 CDS Metme_2291 NC_015572.1 2501794 2502252 R KEGG: cch:Cag_1923 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(2501794..2502252) Methylomonas methanica MC09 10672293 YP_004513195.1 CDS Metme_2292 NC_015572.1 2502371 2502565 D KEGG: mca:MCA0160 hypothetical protein; hypothetical protein 2502371..2502565 Methylomonas methanica MC09 10672294 YP_004513196.1 CDS Metme_2293 NC_015572.1 2502700 2503452 R TIGRFAM: Methylthioadenosine phosphorylase; KEGG: tgr:Tgr7_1751 methylthioadenosine phosphorylase; PFAM: Nucleoside phosphorylase; methylthioadenosine phosphorylase complement(2502700..2503452) Methylomonas methanica MC09 10672295 YP_004513197.1 CDS Metme_2294 NC_015572.1 2503449 2503994 R PFAM: Phosphoribosyltransferase; KEGG: cbg:CbuG_0930 hypoxanthine-guanine phosphoribosyltransferase; phosphoribosyltransferase complement(2503449..2503994) Methylomonas methanica MC09 10672296 YP_004513198.1 CDS Metme_2295 NC_015572.1 2503987 2504976 R KEGG: mca:MCA1984 beta-hexosaminidase; HAMAP: Beta-hexosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-hexosaminidase complement(2503987..2504976) Methylomonas methanica MC09 10672297 YP_004513199.1 CDS Metme_2296 NC_015572.1 2505071 2505469 D PFAM: Flagellar basal body-associated protein FliL; KEGG: hch:HCH_06420 flagellar basal body-associated protein FliL-like protein; flagellar basal body protein FliL 2505071..2505469 Methylomonas methanica MC09 10672298 YP_004513200.1 CDS Metme_2298 NC_015572.1 2507721 2508803 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(2507721..2508803) Methylomonas methanica MC09 10672299 YP_004513201.1 CDS Metme_2299 NC_015572.1 2508800 2509300 R KEGG: pna:Pnap_1740 transposase; transposase complement(2508800..2509300) Methylomonas methanica MC09 10672300 YP_004513202.1 CDS Metme_2300 NC_015572.1 2511152 2513734 R KEGG: dac:Daci_4192 chromosome segregation ATPase-like protein; chromosome segregation ATPase-like protein complement(2511152..2513734) Methylomonas methanica MC09 10672301 YP_004513203.1 CDS Metme_2301 NC_015572.1 2513737 2515689 R KEGG: bpt:Bpet4251 hypothetical protein; hypothetical protein complement(2513737..2515689) Methylomonas methanica MC09 10672302 YP_004513204.1 CDS Metme_2302 NC_015572.1 2515683 2519051 R SMART: ATPase, AAA+ type, core; KEGG: dac:Daci_4194 AAA ATPase; ATPase AAA complement(2515683..2519051) Methylomonas methanica MC09 10672303 YP_004513205.1 CDS Metme_2303 NC_015572.1 2519048 2520400 R SMART: Serine/threonine-protein kinase domain; KEGG: dac:Daci_4195 serine/threonine protein kinase; serine/threonine protein kinase complement(2519048..2520400) Methylomonas methanica MC09 10672304 YP_004513206.1 CDS Metme_2304 NC_015572.1 2520393 2521127 R KEGG: dac:Daci_4196 hypothetical protein; hypothetical protein complement(2520393..2521127) Methylomonas methanica MC09 10672305 YP_004513207.1 CDS Metme_2305 NC_015572.1 2521124 2521600 R KEGG: dac:Daci_4197 hypothetical protein; hypothetical protein complement(2521124..2521600) Methylomonas methanica MC09 10672306 YP_004513208.1 CDS Metme_2306 NC_015572.1 2521597 2523360 R KEGG: bpt:Bpet4246 hypothetical protein; hypothetical protein complement(2521597..2523360) Methylomonas methanica MC09 10672307 YP_004513209.1 CDS Metme_2307 NC_015572.1 2523357 2526035 R PFAM: Cell divisionFtsK/SpoIIIE; KEGG: bpt:Bpet4245 hypothetical protein; DNA translocase FtsK complement(2523357..2526035) Methylomonas methanica MC09 10672308 YP_004513210.1 CDS Metme_2308 NC_015572.1 2526032 2526262 R KEGG: dac:Daci_4200 hypothetical protein; hypothetical protein complement(2526032..2526262) Methylomonas methanica MC09 10672309 YP_004513211.1 CDS Metme_2309 NC_015572.1 2526255 2526596 R KEGG: bpt:Bpet4244 hypothetical protein; hypothetical protein complement(2526255..2526596) Methylomonas methanica MC09 10672310 YP_004513212.1 CDS Metme_2310 NC_015572.1 2526593 2527903 R KEGG: dac:Daci_4201 hypothetical protein; hypothetical protein complement(2526593..2527903) Methylomonas methanica MC09 10672311 YP_004513213.1 CDS Metme_2311 NC_015572.1 2527920 2528189 R PFAM: Protein of unknown function Hp0062; KEGG: dac:Daci_4202 hypothetical protein; hypothetical protein complement(2527920..2528189) Methylomonas methanica MC09 10672312 YP_004513214.1 CDS Metme_2312 NC_015572.1 2528189 2528923 R KEGG: dac:Daci_4203 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A complement(2528189..2528923) Methylomonas methanica MC09 10672313 YP_004513215.1 CDS Metme_2313 NC_015572.1 2529253 2530167 R KEGG: gpb:HDN1F_22890 hypothetical protein; hypothetical protein complement(2529253..2530167) Methylomonas methanica MC09 10672314 YP_004513216.1 CDS Metme_2315 NC_015572.1 2531097 2531357 D KEGG: mpo:Mpop_5139 addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: addiction module antidote protein, CC2985; PFAM: addiction module antidote protein, CC2985; addiction module antidote protein 2531097..2531357 Methylomonas methanica MC09 10672316 YP_004513217.1 CDS Metme_2316 NC_015572.1 2531360 2531650 D PFAM: Plasmid stabilisation system; KEGG: vvu:VV1_2525 plasmid stabilization element ParE; plasmid stabilization system 2531360..2531650 Methylomonas methanica MC09 10672317 YP_004513218.1 CDS Metme_2317 NC_015572.1 2532062 2532979 R KEGG: pin:Ping_1854 hypothetical protein; hypothetical protein complement(2532062..2532979) Methylomonas methanica MC09 10672318 YP_004513219.1 CDS Metme_2318 NC_015572.1 2532981 2534210 R KEGG: cps:CPS_2618 hypothetical protein; hypothetical protein complement(2532981..2534210) Methylomonas methanica MC09 10672319 YP_004513220.1 CDS Metme_2319 NC_015572.1 2534207 2534839 R KEGG: pin:Ping_1847 hypothetical protein; hypothetical protein complement(2534207..2534839) Methylomonas methanica MC09 10672320 YP_004513221.1 CDS Metme_2320 NC_015572.1 2534832 2538512 R KEGG: cps:CPS_2616 hypothetical protein; hypothetical protein complement(2534832..2538512) Methylomonas methanica MC09 10672321 YP_004513222.1 CDS Metme_2321 NC_015572.1 2539054 2539650 D hypothetical protein 2539054..2539650 Methylomonas methanica MC09 10672322 YP_004513223.1 CDS Metme_2322 NC_015572.1 2539731 2541173 R PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III; KEGG: hch:HCH_05002 exonuclease I; SMART: Exonuclease; exodeoxyribonuclease I complement(2539731..2541173) Methylomonas methanica MC09 10672323 YP_004513224.1 CDS Metme_2323 NC_015572.1 2541303 2541902 D PFAM: Polyketide cyclase/dehydrase; KEGG: msl:Msil_0195 hypothetical protein; polyketide cyclase/dehydrase 2541303..2541902 Methylomonas methanica MC09 10672324 YP_004513225.1 CDS Metme_2324 NC_015572.1 2541968 2542918 D KEGG: mei:Msip34_0604 40-residue YVTN family beta-propeller repeat protein; TIGRFAM: YVTN beta-propeller repeat; PFAM: NHL repeat; hypothetical protein 2541968..2542918 Methylomonas methanica MC09 10672325 YP_004513226.1 CDS Metme_2325 NC_015572.1 2542965 2543252 D KEGG: alv:Alvin_1472 hypothetical protein; hypothetical protein 2542965..2543252 Methylomonas methanica MC09 10672326 YP_004513227.1 CDS Metme_2326 NC_015572.1 2543300 2543521 R PFAM: FeoC like transcriptional regulator; KEGG: alv:Alvin_1524 hypothetical protein; hypothetical protein complement(2543300..2543521) Methylomonas methanica MC09 10672327 YP_004513228.1 CDS Metme_2327 NC_015572.1 2543518 2545827 R KEGG: hch:HCH_03835 ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B, N-terminal; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; ferrous iron transport protein B complement(2543518..2545827) Methylomonas methanica MC09 10672328 YP_004513229.1 CDS Metme_2328 NC_015572.1 2545824 2546057 R PFAM: Ferrous iron transporter, FeoA subunit; KEGG: hch:HCH_03834 Fe2+ transport system protein A; FeoA family protein complement(2545824..2546057) Methylomonas methanica MC09 10672329 YP_004513230.1 CDS Metme_2329 NC_015572.1 2546237 2546638 D hypothetical protein 2546237..2546638 Methylomonas methanica MC09 10672330 YP_004513231.1 CDS Metme_2330 NC_015572.1 2546694 2546999 D hypothetical protein 2546694..2546999 Methylomonas methanica MC09 10672331 YP_004513232.1 CDS Metme_2331 NC_015572.1 2548099 2549445 R PFAM: Zonular occludens toxin; KEGG: pap:PSPA7_5366 hypothetical protein; Zonular occludens toxin complement(2548099..2549445) Methylomonas methanica MC09 10672332 YP_004513233.1 CDS Metme_2332 NC_015572.1 2549446 2549793 R PFAM: Protein of unknown function DUF2523; KEGG: pap:PSPA7_5367 bacteriophage protein; hypothetical protein complement(2549446..2549793) Methylomonas methanica MC09 10672333 YP_004513234.1 CDS Metme_2333 NC_015572.1 2549796 2551193 R KEGG: ote:Oter_1689 cell wall surface anchor family protein; hypothetical protein complement(2549796..2551193) Methylomonas methanica MC09 10672334 YP_004513235.1 CDS Metme_2334 NC_015572.1 2551263 2551493 R hypothetical protein complement(2551263..2551493) Methylomonas methanica MC09 10672335 YP_004513236.1 CDS Metme_2335 NC_015572.1 2551688 2552104 R hypothetical protein complement(2551688..2552104) Methylomonas methanica MC09 10672336 YP_004513237.1 CDS Metme_2336 NC_015572.1 2552124 2553266 R KEGG: hiq:CGSHiGG_00610 hypothetical protein; hypothetical protein complement(2552124..2553266) Methylomonas methanica MC09 10672337 YP_004513238.1 CDS Metme_2337 NC_015572.1 2553268 2553774 R hypothetical protein complement(2553268..2553774) Methylomonas methanica MC09 10672338 YP_004513239.1 CDS Metme_2339 NC_015572.1 2554154 2554618 R hypothetical protein complement(2554154..2554618) Methylomonas methanica MC09 10672340 YP_004513240.1 CDS Metme_2340 NC_015572.1 2554856 2555050 D hypothetical protein 2554856..2555050 Methylomonas methanica MC09 10672341 YP_004513241.1 CDS Metme_2341 NC_015572.1 2555061 2555417 D KEGG: hypothetical protein; hypothetical protein 2555061..2555417 Methylomonas methanica MC09 10672342 YP_004513242.1 CDS Metme_2342 NC_015572.1 2555494 2556873 R TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: tcx:Tcr_0501 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(2555494..2556873) Methylomonas methanica MC09 10672343 YP_004513243.1 CDS Metme_2343 NC_015572.1 2556873 2558018 R KEGG: gca:Galf_1765 cytochrome c-type biogenesis protein CcmI; TIGRFAM: Cytochrome c-type biogenesis protein CcmI; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-3; cytochrome c-type biogenesis protein CcmI complement(2556873..2558018) Methylomonas methanica MC09 10672344 YP_004513244.1 CDS Metme_2344 NC_015572.1 2558069 2558530 R PFAM: Cytochrome C biogenesis protein CcmH; KEGG: mca:MCA0416 cytochrome c-type biogenesis protein CcmH; cytochrome C biogenesis protein complement(2558069..2558530) Methylomonas methanica MC09 10672345 YP_004513245.1 CDS Metme_2345 NC_015572.1 2558527 2559066 R KEGG: pna:Pnap_0584 periplasmic protein thiol--disulphide oxidoreductase DsbE; TIGRFAM: Periplasmic protein thiol:disulphide oxidoreductase DsbE; PFAM: Redoxin; protein thiol/disulfide oxidoreductase DsbE complement(2558527..2559066) Methylomonas methanica MC09 10672346 YP_004513246.1 CDS Metme_2346 NC_015572.1 2559059 2561008 R KEGG: gca:Galf_1768 cytochrome c-type biogenesis protein CcmF; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF complement(2559059..2561008) Methylomonas methanica MC09 10672347 YP_004513247.1 CDS Metme_2347 NC_015572.1 2561005 2561439 R KEGG: psp:PSPPH_3310 cytochrome c-type biogenesis protein CcmE; HAMAP: CcmE/CycJ protein; PFAM: CcmE/CycJ protein; Cytochrome c-type biogenesis protein ccmE complement(2561005..2561439) Methylomonas methanica MC09 10672348 YP_004513248.1 CDS Metme_2348 NC_015572.1 2561436 2561600 R KEGG: mca:MCA0420 heme exporter protein CcmD, TIGRFAM: Haem exporter protein D (CcmD); PFAM: Haem exporter protein D (CcmD); heme exporter protein CcmD complement(2561436..2561600) Methylomonas methanica MC09 10672349 YP_004513249.1 CDS Metme_2349 NC_015572.1 2561597 2562358 R KEGG: mca:MCA0952 heme exporter protein CcmC; TIGRFAM: Cytochrome c-type biogenesis protein CcmC; PFAM: Cytochrome c assembly protein; heme exporter protein CcmC complement(2561597..2562358) Methylomonas methanica MC09 10672350 YP_004513250.1 CDS Metme_2350 NC_015572.1 2562364 2563038 R KEGG: mca:MCA0953 heme exporter protein CcmB; TIGRFAM: Cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB complement(2562364..2563038) Methylomonas methanica MC09 10672351 YP_004513251.1 CDS Metme_2351 NC_015572.1 2563029 2563661 R SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, haem export, CcmA; KEGG: ppr:PBPRA0948 cytochrome c biogenesis protein CcmA; PFAM: ABC transporter-like; heme exporter protein CcmA complement(2563029..2563661) Methylomonas methanica MC09 10672352 YP_004513252.1 CDS Metme_2352 NC_015572.1 2564339 2564527 D KEGG: tgr:Tgr7_1278 hypothetical protein; hypothetical protein 2564339..2564527 Methylomonas methanica MC09 10672353 YP_004513253.1 CDS Metme_2353 NC_015572.1 2564521 2564823 D PFAM: Plasmid stabilisation system; KEGG: gur:Gura_3199 addiction module antitoxin; plasmid stabilization system 2564521..2564823 Methylomonas methanica MC09 10672354 YP_004513254.1 CDS Metme_2354 NC_015572.1 2565145 2565396 D KEGG: pna:Pnap_1740 transposase; hypothetical protein 2565145..2565396 Methylomonas methanica MC09 10672355 YP_004513255.1 CDS Metme_2355 NC_015572.1 2565872 2566000 D hypothetical protein 2565872..2566000 Methylomonas methanica MC09 10672356 YP_004513256.1 CDS Metme_2357 NC_015572.1 2567432 2568745 R KEGG: dar:Daro_1888 hypothetical protein; hypothetical protein complement(2567432..2568745) Methylomonas methanica MC09 10672358 YP_004513257.1 CDS Metme_2358 NC_015572.1 2569344 2569841 D TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: mrb:Mrub_1135 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 2569344..2569841 Methylomonas methanica MC09 10672359 YP_004513258.1 CDS Metme_2359 NC_015572.1 2569838 2570932 D TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: mrb:Mrub_1137 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; phosphoribosylaminoimidazole carboxylase ATPase subunit 2569838..2570932 Methylomonas methanica MC09 10672360 YP_004513259.1 CDS Metme_2360 NC_015572.1 2570999 2572360 D PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: cyh:Cyan8802_2894 V-type ATP synthase subunit B; H+transporting two-sector ATPase subunit alpha/beta 2570999..2572360 Methylomonas methanica MC09 10672361 YP_004513260.1 CDS Metme_2361 NC_015572.1 2572341 2572943 D KEGG: cyp:PCC8801_3225 V-type ATP synthase subunit D; TIGRFAM: ATPase, V1/A1 complex, subunit D; PFAM: ATPase, V1/A1 complex, subunit D; V-type ATPase subunit D 2572341..2572943 Methylomonas methanica MC09 10672362 YP_004513261.1 CDS Metme_2362 NC_015572.1 2572944 2574740 D PFAM: ATPase, V0/A0 complex, 116kDa subunit; KEGG: cyh:Cyan8802_2896 V-type ATPase 116 kDa subunit; V-type ATPase 116 kDa subunit 2572944..2574740 Methylomonas methanica MC09 10672363 YP_004513262.1 CDS Metme_2363 NC_015572.1 2574740 2575189 D PFAM: ATPase, F0/V0 complex, subunit C; KEGG: hel:HELO_2670 V-type ATP synthase subunit K; H+transporting two-sector ATPase subunit C 2574740..2575189 Methylomonas methanica MC09 10672364 YP_004513263.1 CDS Metme_2364 NC_015572.1 2575200 2575886 D KEGG: hel:HELO_2669 hypothetical protein; hypothetical protein 2575200..2575886 Methylomonas methanica MC09 10672365 YP_004513264.1 CDS Metme_2365 NC_015572.1 2575883 2576575 D KEGG: cyh:Cyan8802_2899 hypothetical protein; hypothetical protein 2575883..2576575 Methylomonas methanica MC09 10672366 YP_004513265.1 CDS Metme_2366 NC_015572.1 2576572 2578377 D PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: cyp:PCC8801_3217 V-type ATP synthase subunit A; H+transporting two-sector ATPase subunit alpha/beta 2576572..2578377 Methylomonas methanica MC09 10672367 YP_004513266.1 CDS Metme_2367 NC_015572.1 2578530 2579051 D manually curated; TIGRFAM: PAS; KEGG: slt:Slit_2381 PAS/PAC sensor protein; PFAM: PAS fold-3; PAS sensor protein 2578530..2579051 Methylomonas methanica MC09 10672368 YP_004513267.1 CDS Metme_2368 NC_015572.1 2579029 2580522 D KEGG: azo:azo3475 MCP-domain-containing signal transduction protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer 2579029..2580522 Methylomonas methanica MC09 10672369 YP_004513268.1 CDS Metme_2369 NC_015572.1 2580709 2582631 D PFAM: Lipopolysaccharide biosynthesis; KEGG: neu:NE0588 phage integrase:chain length determinant protein; lipopolysaccharide biosynthesis protein 2580709..2582631 Methylomonas methanica MC09 10672370 YP_004513269.1 CDS Metme_2370 NC_015572.1 2582735 2584795 D PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: Inorganic H+ pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; KEGG: mem:Memar_0044 membrane-bound proton-translocating pyrophosphatase; pyrophosphate-energized proton pump 2582735..2584795 Methylomonas methanica MC09 10672371 YP_004513270.1 CDS Metme_2371 NC_015572.1 2584802 2586049 D KEGG: nwa:Nwat_0840 hypothetical protein; hypothetical protein 2584802..2586049 Methylomonas methanica MC09 10672372 YP_004513271.1 CDS Metme_2372 NC_015572.1 2586351 2587199 D KEGG: slt:Slit_1299 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 2586351..2587199 Methylomonas methanica MC09 10672373 YP_004513272.1 CDS Metme_2373 NC_015572.1 2587243 2588058 D KEGG: mms:mma_0564 signal transduction protein; TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD; signal transduction protein 2587243..2588058 Methylomonas methanica MC09 10672374 YP_004513273.1 CDS Metme_2374 NC_015572.1 2588072 2589925 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; GAF; KEGG: hse:Hsero_3733 two component transmembrane sensor histidine kinase; SMART: ATP-binding region, ATPase-like; GAF; PAC motif; multi-sensor signal transduction histidine kinase 2588072..2589925 Methylomonas methanica MC09 10672375 YP_004513274.1 CDS Metme_2375 NC_015572.1 2589922 2592123 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS fold; KEGG: response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS; PAC motif; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 2589922..2592123 Methylomonas methanica MC09 10672376 YP_004513275.1 CDS Metme_2376 NC_015572.1 2592137 2593612 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; KEGG: cyc:PCC7424_3523 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase 2592137..2593612 Methylomonas methanica MC09 10672377 YP_004513276.1 CDS Metme_2377 NC_015572.1 2594223 2596169 D TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor region; GAF; PAS fold; ATP-binding region, ATPase-like; KEGG: pol:Bpro_3509 signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; GAF; signal transduction histidine kinase 2594223..2596169 Methylomonas methanica MC09 10672378 YP_004513277.1 CDS Metme_2378 NC_015572.1 2596186 2598684 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS fold-4; PAS fold; KEGG: npu:Npun_F3678 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS; PAC motif; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 2596186..2598684 Methylomonas methanica MC09 10672379 YP_004513278.1 CDS Metme_2379 NC_015572.1 2599012 2599311 R KEGG: hch:HCH_04031 hypothetical protein; hypothetical protein complement(2599012..2599311) Methylomonas methanica MC09 10672380 YP_004513279.1 CDS Metme_2380 NC_015572.1 2599326 2600141 R PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: mca:MCA2497 tRNA pseudouridine synthase A; tRNA pseudouridine synthase A complement(2599326..2600141) Methylomonas methanica MC09 10672381 YP_004513280.1 CDS Metme_2381 NC_015572.1 2600134 2600616 R PFAM: YkuD domain; KEGG: mca:MCA1874 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(2600134..2600616) Methylomonas methanica MC09 10672382 YP_004513281.1 CDS Metme_2382 NC_015572.1 2600613 2601938 R TIGRFAM: 23S rRNA methyltransferase/RumA; HAMAP: 23S rRNA (uracil-5-)-methyltransferase rumA; KEGG: mca:MCA1898 23S rRNA (uracil-5-)-methyltransferase RumA; PFAM: (Uracil-5)-methyltransferase; Deoxyribonuclease/rho motif-related TRAM; 23S rRNA (uracil-5-)-methyltransferase RumA complement(2600613..2601938) Methylomonas methanica MC09 10672383 YP_004513282.1 CDS Metme_2383 NC_015572.1 2602059 2602949 R TIGRFAM: Cysteine synthase B; Cysteine synthase K/M; KEGG: mca:MCA1899 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase B complement(2602059..2602949) Methylomonas methanica MC09 10672384 YP_004513283.1 CDS Metme_2384 NC_015572.1 2603087 2605171 D PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; HAMAP: Polyphosphate kinase; KEGG: mca:MCA1954 polyphosphate kinase; polyphosphate kinase 2603087..2605171 Methylomonas methanica MC09 10672385 YP_004513284.1 CDS Metme_2385 NC_015572.1 2605178 2605897 D SMART: Exonuclease; TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; KEGG: mmw:Mmwyl1_1705 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; DNA polymerase III subunit epsilon 2605178..2605897 Methylomonas methanica MC09 10672386 YP_004513285.1 CDS Metme_2386 NC_015572.1 2605911 2606897 R KEGG: alv:Alvin_0780 RNA polymerase sigma-70 subunit RpoD subfamily; TIGRFAM: RNA polymerase sigma factor RpoS, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; RpoD subfamily RNA polymerase sigma-70 subunit complement(2605911..2606897) Methylomonas methanica MC09 10672387 YP_004513286.1 CDS Metme_2387 NC_015572.1 2607315 2607812 R KEGG: alv:Alvin_1130 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ complement(2607315..2607812) Methylomonas methanica MC09 10672388 YP_004513287.1 CDS Metme_2388 NC_015572.1 2607893 2608408 D KEGG: mca:MCA2450 molybdopterin-guanine dinucleotide biosynthesis protein MobB; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; PFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; molybdopterin-guanine dinucleotide biosynthesis protein B 2607893..2608408 Methylomonas methanica MC09 10672389 YP_004513288.1 CDS Metme_2389 NC_015572.1 2608411 2609655 D KEGG: tgr:Tgr7_2132 molybdenum cofactor synthesis domain protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; molybdenum cofactor synthesis domain-containing protein 2608411..2609655 Methylomonas methanica MC09 10672390 YP_004513289.1 CDS Metme_2390 NC_015572.1 2609682 2611103 R PFAM: Porin, alpha proteobacteria type; KEGG: pol:Bpro_5280 hypothetical protein; porin complement(2609682..2611103) Methylomonas methanica MC09 10672391 YP_004513290.1 CDS Metme_2391 NC_015572.1 2611114 2611581 R hypothetical protein complement(2611114..2611581) Methylomonas methanica MC09 10672392 YP_004513291.1 CDS Metme_2392 NC_015572.1 2611673 2615500 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Type IV pilus assembly PilZ; KEGG: hch:HCH_01032 signal transduction protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase complement(2611673..2615500) Methylomonas methanica MC09 10672393 YP_004513292.1 CDS Metme_2393 NC_015572.1 2615737 2616513 R KEGG: spl:Spea_0714 hypothetical protein; hypothetical protein complement(2615737..2616513) Methylomonas methanica MC09 10672394 YP_004513293.1 CDS Metme_2394 NC_015572.1 2616474 2616797 R KEGG: bur:Bcep18194_A4015 rhodanese-related sulfurtransferase; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein complement(2616474..2616797) Methylomonas methanica MC09 10672395 YP_004513294.1 CDS Metme_2395 NC_015572.1 2616788 2617984 R KEGG: nhl:Nhal_2700 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; aspartate transaminase complement(2616788..2617984) Methylomonas methanica MC09 10672396 YP_004513295.1 CDS Metme_2396 NC_015572.1 2618064 2618486 D TIGRFAM: RNA polymerase-binding, DksA; KEGG: mca:MCA0517 DnaK suppressor protein; TraR/DksA family transcriptional regulator 2618064..2618486 Methylomonas methanica MC09 10672397 YP_004513296.1 CDS Metme_2397 NC_015572.1 2618489 2619376 D PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; manually curated; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; KEGG: mfa:Mfla_1109 glutamyl-Q tRNA(Asp) synthetase; HAMAP: Glutamyl-Q tRNA(Asp) synthetase; glutamyl-Q tRNA(Asp) synthetase 2618489..2619376 Methylomonas methanica MC09 10672398 YP_004513297.1 CDS Metme_2398 NC_015572.1 2619522 2621051 D hypothetical protein 2619522..2621051 Methylomonas methanica MC09 10672399 YP_004513298.1 CDS Metme_2399 NC_015572.1 2621226 2623163 D PFAM: AMP-dependent synthetase/ligase; TIGRFAM: Acetate--CoA ligase; HAMAP: Acetyl-coenzyme A synthetase; KEGG: alv:Alvin_0165 acetate/CoA ligase; acetyl-coenzyme A synthetase 2621226..2623163 Methylomonas methanica MC09 10672400 YP_004513299.1 CDS Metme_2400 NC_015572.1 2623169 2624047 D PFAM: Protein of unknown function DUF6, transmembrane; KEGG: mca:MCA2967 hypothetical protein; hypothetical protein 2623169..2624047 Methylomonas methanica MC09 10672401 YP_004513300.1 CDS Metme_2401 NC_015572.1 2624189 2624389 R hypothetical protein complement(2624189..2624389) Methylomonas methanica MC09 10672402 YP_004513301.1 CDS Metme_2402 NC_015572.1 2624504 2627266 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS fold-4; GAF; KEGG: mmb:Mmol_1227 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(2624504..2627266) Methylomonas methanica MC09 10672403 YP_004513302.1 CDS Metme_2403 NC_015572.1 2627274 2630573 R TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS fold-4; PAS fold; Signal transduction response regulator, receiver region; KEGG: gca:Galf_1309 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS; PAC motif; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase complement(2627274..2630573) Methylomonas methanica MC09 10672404 YP_004513303.1 CDS Metme_2404 NC_015572.1 2630578 2631204 R KEGG: gur:Gura_1551 hypothetical protein; hypothetical protein complement(2630578..2631204) Methylomonas methanica MC09 10672405 YP_004513304.1 CDS Metme_2405 NC_015572.1 2631265 2633727 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: TonB-dependent receptor plug; TonB-dependent receptor plug complement(2631265..2633727) Methylomonas methanica MC09 10672406 YP_004513305.1 CDS Metme_2406 NC_015572.1 2634223 2636322 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS fold; KEGG: rfr:Rfer_1767 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS; PAC motif; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(2634223..2636322) Methylomonas methanica MC09 10672407 YP_004513306.1 CDS Metme_2407 NC_015572.1 2636319 2638484 R KEGG: rfr:Rfer_1768 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Hpt sensor hybrid histidine kinase complement(2636319..2638484) Methylomonas methanica MC09 10672408 YP_004513307.1 CDS Metme_2408 NC_015572.1 2638541 2640922 R TIGRFAM: PAS; PFAM: HAMP linker domain; PAS fold; PAS fold-3; KEGG: tbd:Tbd_1456 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: HAMP linker domain; PAS; PAC motif; PAS/PAC sensor protein complement(2638541..2640922) Methylomonas methanica MC09 10672409 YP_004513308.1 CDS Metme_2409 NC_015572.1 2641311 2643671 R KEGG: mca:MCA3025 penicillin acylase II; PFAM: Peptidase S45, penicillin amidase; acyl-homoserine-lactone acylase complement(2641311..2643671) Methylomonas methanica MC09 10672410 YP_004513309.1 CDS Metme_2410 NC_015572.1 2644083 2644748 D PFAM: PspA/IM30; KEGG: PspA/IM30 family protein; PspA/IM30 family protein 2644083..2644748 Methylomonas methanica MC09 10672411 YP_004513310.1 CDS Metme_2411 NC_015572.1 2644766 2645392 D PFAM: Protein of unknown function DUF1449; KEGG: hypothetical protein; hypothetical protein 2644766..2645392 Methylomonas methanica MC09 10672412 YP_004513311.1 CDS Metme_2412 NC_015572.1 2645413 2647113 D KEGG: tbd:Tbd_2218 hypothetical protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 2645413..2647113 Methylomonas methanica MC09 10672413 YP_004513312.1 CDS Metme_2413 NC_015572.1 2647178 2647858 D KEGG: nde:NIDE4194 hypothetical protein; TIGRFAM: Protein of unknown function DUF124; PFAM: Protein of unknown function DUF124; hypothetical protein 2647178..2647858 Methylomonas methanica MC09 10672414 YP_004513313.1 CDS Metme_2414 NC_015572.1 2647876 2649030 D PFAM: Peptidase M48, Ste24p; KEGG: nde:NIDE4192 peptidase; peptidase M48 Ste24p 2647876..2649030 Methylomonas methanica MC09 10672415 YP_004513314.1 CDS Metme_2415 NC_015572.1 2649238 2649630 D KEGG: aav:Aave_2301 hypothetical protein; hypothetical protein 2649238..2649630 Methylomonas methanica MC09 10672416 YP_004513315.1 CDS Metme_2416 NC_015572.1 2649681 2650067 D KEGG: rru:Rru_A0637 hypothetical protein; hypothetical protein 2649681..2650067 Methylomonas methanica MC09 10672417 YP_004513316.1 CDS Metme_2418 NC_015572.1 2650949 2652235 D KEGG: msl:Msil_2615 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase (ubiquinone) 2650949..2652235 Methylomonas methanica MC09 10672419 YP_004513317.1 CDS Metme_2419 NC_015572.1 2652474 2652845 R KEGG: mil:ML5_4023 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF1877; hypothetical protein complement(2652474..2652845) Methylomonas methanica MC09 10672420 YP_004513318.1 CDS Metme_2421 NC_015572.1 2653983 2654957 R KEGG: dfe:Dfer_0662 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; hypothetical protein complement(2653983..2654957) Methylomonas methanica MC09 10672422 YP_004513319.1 CDS Metme_2422 NC_015572.1 2654957 2658496 R KEGG: dfe:Dfer_0663 hypothetical protein; hypothetical protein complement(2654957..2658496) Methylomonas methanica MC09 10672423 YP_004513320.1 CDS Metme_2423 NC_015572.1 2658496 2660448 R KEGG: tmz:Tmz1t_1864 AAA ATPase central domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; ATPase AAA complement(2658496..2660448) Methylomonas methanica MC09 10672424 YP_004513321.1 CDS Metme_2424 NC_015572.1 2660459 2662030 R KEGG: tmz:Tmz1t_1865 hypothetical protein; hypothetical protein complement(2660459..2662030) Methylomonas methanica MC09 10672425 YP_004513322.1 CDS Metme_2425 NC_015572.1 2662027 2663889 R KEGG: tmz:Tmz1t_1866 hypothetical protein; hypothetical protein complement(2662027..2663889) Methylomonas methanica MC09 10672426 YP_004513323.1 CDS Metme_2426 NC_015572.1 2663911 2665617 R KEGG: tmz:Tmz1t_1867 hypothetical protein; hypothetical protein complement(2663911..2665617) Methylomonas methanica MC09 10672427 YP_004513324.1 CDS Metme_2427 NC_015572.1 2665621 2667462 R KEGG: tmz:Tmz1t_1869 hypothetical protein; hypothetical protein complement(2665621..2667462) Methylomonas methanica MC09 10672428 YP_004513325.1 CDS Metme_2428 NC_015572.1 2667478 2668419 R KEGG: tmz:Tmz1t_1870 hypothetical protein; hypothetical protein complement(2667478..2668419) Methylomonas methanica MC09 10672429 YP_004513326.1 CDS Metme_2429 NC_015572.1 2668421 2670820 R KEGG: tmz:Tmz1t_1871 hypothetical protein; hypothetical protein complement(2668421..2670820) Methylomonas methanica MC09 10672430 YP_004513327.1 CDS Metme_2430 NC_015572.1 2670825 2672999 R TIGRFAM: Conserved hypothetical protein CHP02243; KEGG: tmz:Tmz1t_1872 hypothetical protein; hypothetical protein complement(2670825..2672999) Methylomonas methanica MC09 10672431 YP_004513328.1 CDS Metme_2431 NC_015572.1 2673038 2673472 R PFAM: GPW/gp25; KEGG: tmz:Tmz1t_1873 gpW/GP25 family protein; GPW/gp25 family protein complement(2673038..2673472) Methylomonas methanica MC09 10672432 YP_004513329.1 CDS Metme_2432 NC_015572.1 2673430 2675289 R KEGG: tmz:Tmz1t_1874 hypothetical protein; hypothetical protein complement(2673430..2675289) Methylomonas methanica MC09 10672433 YP_004513330.1 CDS Metme_2433 NC_015572.1 2675283 2675930 R KEGG: tmz:Tmz1t_1875 hypothetical protein; hypothetical protein complement(2675283..2675930) Methylomonas methanica MC09 10672434 YP_004513331.1 CDS Metme_2434 NC_015572.1 2675932 2676975 R KEGG: tmz:Tmz1t_1876 hypothetical protein; hypothetical protein complement(2675932..2676975) Methylomonas methanica MC09 10672435 YP_004513332.1 CDS Metme_2435 NC_015572.1 2676977 2677138 R hypothetical protein complement(2676977..2677138) Methylomonas methanica MC09 10672436 YP_004513333.1 CDS Metme_2436 NC_015572.1 2677162 2677947 R KEGG: tmz:Tmz1t_1878 hypothetical protein; hypothetical protein complement(2677162..2677947) Methylomonas methanica MC09 10672437 YP_004513334.1 CDS Metme_2437 NC_015572.1 2677940 2678425 R KEGG: tmz:Tmz1t_1879 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; hypothetical protein complement(2677940..2678425) Methylomonas methanica MC09 10672438 YP_004513335.1 CDS Metme_2438 NC_015572.1 2678418 2679971 R KEGG: tmz:Tmz1t_1880 hypothetical protein; hypothetical protein complement(2678418..2679971) Methylomonas methanica MC09 10672439 YP_004513336.1 CDS Metme_2439 NC_015572.1 2679975 2680430 R KEGG: tmz:Tmz1t_1881 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; hypothetical protein complement(2679975..2680430) Methylomonas methanica MC09 10672440 YP_004513337.1 CDS Metme_2440 NC_015572.1 2680443 2682620 R KEGG: tmz:Tmz1t_1882 tail sheath protein; tail sheath protein complement(2680443..2682620) Methylomonas methanica MC09 10672441 YP_004513338.1 CDS Metme_2441 NC_015572.1 2682661 2683482 R KEGG: tmz:Tmz1t_1883 hypothetical protein; hypothetical protein complement(2682661..2683482) Methylomonas methanica MC09 10672442 YP_004513339.1 CDS Metme_2442 NC_015572.1 2683479 2684072 R KEGG: tmz:Tmz1t_1884 hypothetical protein; hypothetical protein complement(2683479..2684072) Methylomonas methanica MC09 10672443 YP_004513340.1 CDS Metme_2443 NC_015572.1 2684480 2684929 R hypothetical protein complement(2684480..2684929) Methylomonas methanica MC09 10672444 YP_004513341.1 CDS Metme_2444 NC_015572.1 2685091 2685339 R KEGG: pat:Patl_2821 hypothetical protein; hypothetical protein complement(2685091..2685339) Methylomonas methanica MC09 10672445 YP_004513342.1 CDS Metme_2445 NC_015572.1 2685926 2687281 D KEGG: mca:MCA1102 sigma-54 dependent transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; Fis family transcriptional regulator 2685926..2687281 Methylomonas methanica MC09 10672446 YP_004513343.1 CDS Metme_2446 NC_015572.1 2687278 2688141 R KEGG: mca:MCA0359 phosphotransferase domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein complement(2687278..2688141) Methylomonas methanica MC09 10672447 YP_004513344.1 CDS Metme_2447 NC_015572.1 2688141 2689937 R PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: nhl:Nhal_1910 ABC transporter related protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase complement(2688141..2689937) Methylomonas methanica MC09 10672448 YP_004513345.1 CDS Metme_2448 NC_015572.1 2690029 2691945 D PFAM: Lytic transglycosylase-like, catalytic; KEGG: tkm:TK90_2373 lytic transglycosylase catalytic; lytic transglycosylase catalytic subunit 2690029..2691945 Methylomonas methanica MC09 10672449 YP_004513346.1 CDS Metme_2449 NC_015572.1 2692022 2692537 D PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; HAMAP: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; KEGG: mmb:Mmol_1540 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; 3-hydroxydecanoyl-ACP dehydratase 2692022..2692537 Methylomonas methanica MC09 10672450 YP_004513347.1 CDS Metme_2450 NC_015572.1 2692547 2693767 D KEGG: mca:MCA2879 3-oxoacyl-(acyl-carrier-protein) synthase I; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-ketoacyl-ACP synthase I 2692547..2693767 Methylomonas methanica MC09 10672451 YP_004513348.1 CDS Metme_2451 NC_015572.1 2693816 2694673 D KEGG: cja:CJA_2075 hypothetical protein; HAMAP: tRNA 2-thiocytidine biosynthesis protein TtcA; PFAM: PP-loop; tRNA 2-thiocytidine biosynthesis protein TtcA 2693816..2694673 Methylomonas methanica MC09 10672452 YP_004513349.1 CDS Metme_2452 NC_015572.1 2694690 2695736 D TIGRFAM: UDP-glucose 4-epimerase; KEGG: sde:Sde_0734 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 2694690..2695736 Methylomonas methanica MC09 10672453 YP_004513350.1 CDS Metme_2453 NC_015572.1 2695819 2696178 R PFAM: TfoX, N-terminal; KEGG: mep:MPQ_0202 tfox domain protein; TfoX domain-containing protein complement(2695819..2696178) Methylomonas methanica MC09 10672454 YP_004513351.1 CDS Metme_2454 NC_015572.1 2696201 2696674 R KEGG: hna:Hneap_1663 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2696201..2696674) Methylomonas methanica MC09 10672455 YP_004513352.1 CDS Metme_2455 NC_015572.1 2696721 2700311 R KEGG: mac:MA2300 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; 5-oxoprolinase complement(2696721..2700311) Methylomonas methanica MC09 10672456 YP_004513353.1 CDS Metme_2456 NC_015572.1 2700527 2700880 R KEGG: gbm:Gbem_1715 hypothetical protein; HAMAP: Protein of unknown function DUF167; PFAM: Protein of unknown function DUF167; hypothetical protein complement(2700527..2700880) Methylomonas methanica MC09 10672457 YP_004513354.1 CDS Metme_2457 NC_015572.1 2700970 2701653 R PFAM: Helix-turn-helix, HxlR type; KEGG: helix-turn-helix HxlR type; HxlR family transcriptional regulator complement(2700970..2701653) Methylomonas methanica MC09 10672458 YP_004513355.1 CDS Metme_2458 NC_015572.1 2701821 2702036 D PFAM: 4-oxalocrotonate tautomerase; KEGG: pst:PSPTO_4257 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2701821..2702036 Methylomonas methanica MC09 10672459 YP_004513356.1 CDS Metme_2459 NC_015572.1 2702196 2708603 R PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; KEGG: meh:M301_0675 alpha-2-macroglobulin domain protein; alpha-2-macroglobulin complement(2702196..2708603) Methylomonas methanica MC09 10672460 YP_004513357.1 CDS Metme_2460 NC_015572.1 2708924 2709055 D hypothetical protein 2708924..2709055 Methylomonas methanica MC09 10672461 YP_004513358.1 CDS Metme_2461 NC_015572.1 2709531 2711540 D TIGRFAM: Hopene cyclase; Squalene cyclase; KEGG: mca:MCA0812 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 2709531..2711540 Methylomonas methanica MC09 10672462 YP_004513359.1 CDS Metme_2462 NC_015572.1 2711615 2713321 R TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: mca:MCA1114 general secretion pathway protein E; SMART: ATPase, AAA+ type, core; general secretory pathway protein E complement(2711615..2713321) Methylomonas methanica MC09 10672463 YP_004513360.1 CDS Metme_2463 NC_015572.1 2713599 2714480 D PFAM: Protein of unknown function DUF2167, membrane; KEGG: pfl:PFL_1898 hypothetical protein; hypothetical protein 2713599..2714480 Methylomonas methanica MC09 10672464 YP_004513361.1 CDS Metme_2464 NC_015572.1 2714608 2715690 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(2714608..2715690) Methylomonas methanica MC09 10672465 YP_004513362.1 CDS Metme_2465 NC_015572.1 2715687 2716187 R KEGG: pna:Pnap_1740 transposase; transposase complement(2715687..2716187) Methylomonas methanica MC09 10672466 YP_004513363.1 CDS Metme_2466 NC_015572.1 2716466 2716828 D KEGG: plm:Plim_3480 UspA domain protein; UspA domain-containing protein 2716466..2716828 Methylomonas methanica MC09 10672467 YP_004513364.1 CDS Metme_2467 NC_015572.1 2717212 2717922 R KEGG: mep:MPQ_2599 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(2717212..2717922) Methylomonas methanica MC09 10672468 YP_004513365.1 CDS Metme_2468 NC_015572.1 2718094 2718246 D hypothetical protein 2718094..2718246 Methylomonas methanica MC09 10672469 YP_004513366.1 CDS Metme_2469 NC_015572.1 2718573 2718875 R KEGG: plm:Plim_0349 hypothetical protein; hypothetical protein complement(2718573..2718875) Methylomonas methanica MC09 10672470 YP_004513367.1 CDS Metme_2471 NC_015572.1 2720014 2721126 D PFAM: Transposase, IS801/IS1294; KEGG: dat:HRM2_00150 transposase for insertion sequence 801 (transposase 32 family protein); transposase 2720014..2721126 Methylomonas methanica MC09 10672472 YP_004513368.1 CDS Metme_2472 NC_015572.1 2721443 2721715 R hypothetical protein complement(2721443..2721715) Methylomonas methanica MC09 10672473 YP_004513369.1 CDS Metme_2473 NC_015572.1 2721735 2721917 R hypothetical protein complement(2721735..2721917) Methylomonas methanica MC09 10672474 YP_004513370.1 CDS Metme_2474 NC_015572.1 2721997 2722419 R KEGG: hypothetical protein; hypothetical protein complement(2721997..2722419) Methylomonas methanica MC09 10672475 YP_004513371.1 CDS Metme_2475 NC_015572.1 2722516 2723889 R PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: acl:ACL_0438 Fic-domain-containing protein; Fic family protein complement(2722516..2723889) Methylomonas methanica MC09 10672476 YP_004513372.1 CDS Metme_2476 NC_015572.1 2724029 2724535 R PFAM: HEPN; HEPN domain-containing protein complement(2724029..2724535) Methylomonas methanica MC09 10672477 YP_004513373.1 CDS Metme_2478 NC_015572.1 2726632 2726808 D PFAM: CsbD-like; KEGG: alv:Alvin_1144 CsbD family protein; CsbD family protein 2726632..2726808 Methylomonas methanica MC09 10672479 YP_004513374.1 CDS Metme_2479 NC_015572.1 2727004 2727153 D KEGG: cli:Clim_0907 hypothetical protein; hypothetical protein 2727004..2727153 Methylomonas methanica MC09 10672480 YP_004513375.1 CDS Metme_2481 NC_015572.1 2727638 2728821 R KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(join(2727638..2728558,2728558..2728821)) Methylomonas methanica MC09 10672482 YP_004513376.1 CDS Metme_2482 NC_015572.1 2730243 2730581 D hypothetical protein 2730243..2730581 Methylomonas methanica MC09 10672483 YP_004513377.1 CDS Metme_2483 NC_015572.1 2730670 2732007 D KEGG: neu:NE0538 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 2730670..2732007 Methylomonas methanica MC09 10672484 YP_004513378.1 CDS Metme_2484 NC_015572.1 2732004 2733179 D KEGG: nmu:Nmul_A1841 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2732004..2733179 Methylomonas methanica MC09 10672485 YP_004513379.1 CDS Metme_2485 NC_015572.1 2733176 2736304 D PFAM: Acriflavin resistance protein; KEGG: nmu:Nmul_A1842 acriflavin resistance protein; acriflavin resistance protein 2733176..2736304 Methylomonas methanica MC09 10672486 YP_004513380.1 CDS Metme_2486 NC_015572.1 2736378 2736662 D hypothetical protein 2736378..2736662 Methylomonas methanica MC09 10672487 YP_004513381.1 CDS Metme_2488 NC_015572.1 2737567 2737854 D hypothetical protein 2737567..2737854 Methylomonas methanica MC09 10672489 YP_004513382.1 CDS Metme_2490 NC_015572.1 2738386 2738886 D KEGG: pna:Pnap_1740 transposase; transposase 2738386..2738886 Methylomonas methanica MC09 10672490 YP_004513383.1 CDS Metme_2492 NC_015572.1 2741486 2742625 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: dma:DMR_01230 transposase for insertion sequence element; transposase IS116/IS110/IS902 family protein 2741486..2742625 Methylomonas methanica MC09 10672492 YP_004513384.1 CDS Metme_2493 NC_015572.1 2743149 2743775 D hypothetical protein 2743149..2743775 Methylomonas methanica MC09 10672493 YP_004513385.1 CDS Metme_2494 NC_015572.1 2743901 2744425 D KEGG: cvi:CV_0126 hypothetical protein; hypothetical protein 2743901..2744425 Methylomonas methanica MC09 10672494 YP_004513386.1 CDS Metme_2495 NC_015572.1 2744504 2745802 R PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: aca:ACP_3214 group II intron-encoded maturase; RNA-directed DNA polymerase complement(2744504..2745802) Methylomonas methanica MC09 10672495 YP_004513387.1 CDS Metme_2496 NC_015572.1 2746566 2747180 D hypothetical protein 2746566..2747180 Methylomonas methanica MC09 10672496 YP_004513388.1 CDS Metme_2498 NC_015572.1 2747644 2748804 R PFAM: PepSY-associated TM helix; KEGG: ccs:CCNA_01860 rare lipoprotein B precursor; PepSY-associated TM helix domain-containing protein complement(2747644..2748804) Methylomonas methanica MC09 10672498 YP_004513389.1 CDS Metme_2499 NC_015572.1 2748812 2751145 R PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; KEGG: pfs:PFLU2509 TonB-receptor protein; TonB-dependent receptor plug complement(2748812..2751145) Methylomonas methanica MC09 10672499 YP_004513390.1 CDS Metme_2500 NC_015572.1 2751436 2752296 R PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: tgr:Tgr7_3076 transcriptional regulator; LysR family transcriptional regulator complement(2751436..2752296) Methylomonas methanica MC09 10672500 YP_004513391.1 CDS Metme_2501 NC_015572.1 2752438 2753304 D hypothetical protein 2752438..2753304 Methylomonas methanica MC09 10672501 YP_004513392.1 CDS Metme_2502 NC_015572.1 2753345 2754925 D KEGG: nde:NIDE3241 multidrug resistance protein B; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; EmrB/QacA subfamily drug resistance transporter 2753345..2754925 Methylomonas methanica MC09 10672502 YP_004513393.1 CDS Metme_2503 NC_015572.1 2754925 2756400 D KEGG: afr:AFE_0863 RND efflux system, drug efflux transporter, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 2754925..2756400 Methylomonas methanica MC09 10672503 YP_004513394.1 CDS Metme_2504 NC_015572.1 2756390 2757547 D PFAM: Secretion protein HlyD; KEGG: nde:NIDE3239 multidrug resistance protein A; secretion protein HlyD family protein 2756390..2757547 Methylomonas methanica MC09 10672504 YP_004513395.1 CDS Metme_2505 NC_015572.1 2757554 2758009 R KEGG: mca:MCA2506 Rrf2 family protein; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2; BadM/Rrf2 family transcriptional regulator complement(2757554..2758009) Methylomonas methanica MC09 10672505 YP_004513396.1 CDS Metme_2506 NC_015572.1 2758203 2758577 D PFAM: Globin, truncated bacterial-like; KEGG: mca:MCA2507 hypothetical protein; globin 2758203..2758577 Methylomonas methanica MC09 10672506 YP_004513397.1 CDS Metme_2507 NC_015572.1 2758742 2759464 D PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: llo:LLO_2922 oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2758742..2759464 Methylomonas methanica MC09 10672507 YP_004513398.1 CDS Metme_2508 NC_015572.1 2759579 2759749 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: hne:HNE_0571 rubredoxin; rubredoxin-type Fe(Cys)4 protein 2759579..2759749 Methylomonas methanica MC09 10672508 YP_004513399.1 CDS Metme_2509 NC_015572.1 2759919 2760236 D KEGG: gca:Galf_2474 hypothetical protein; hypothetical protein 2759919..2760236 Methylomonas methanica MC09 10672509 YP_004513400.1 CDS Metme_2510 NC_015572.1 2760233 2760829 D KEGG: mca:MCA2401 hypothetical protein; hypothetical protein 2760233..2760829 Methylomonas methanica MC09 10672510 YP_004513401.1 CDS Metme_2511 NC_015572.1 2760832 2762319 D KEGG: mca:MCA2400 nitric-oxide reductase, B subunit; nitric-oxide reductase 2760832..2762319 Methylomonas methanica MC09 10672511 YP_004513402.1 CDS Metme_2512 NC_015572.1 2762375 2762599 R KEGG: eba:ebB104 transposase, fragment; hypothetical protein complement(2762375..2762599) Methylomonas methanica MC09 10672512 YP_004513403.1 CDS Metme_2513 NC_015572.1 2762596 2762883 R hypothetical protein complement(2762596..2762883) Methylomonas methanica MC09 10672513 YP_004513404.1 CDS Metme_2514 NC_015572.1 2762990 2763433 R PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: bfs:BF1743 hypothetical protein; Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein complement(2762990..2763433) Methylomonas methanica MC09 10672514 YP_004513405.1 CDS Metme_2515 NC_015572.1 2763455 2770768 R KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: Transglutaminase-like; Delta endotoxin, N-terminal; YD repeat; RHS repeat-associated core domain-containing protein complement(2763455..2770768) Methylomonas methanica MC09 10672515 YP_004513406.1 CDS Metme_2516 NC_015572.1 2770848 2772551 R PFAM: Prenyltransferase/squalene oxidase; Thrombospondin, type 3-like repeat; KEGG: hau:Haur_2819 AAA ATPase; prenyltransferase/squalene oxidase complement(2770848..2772551) Methylomonas methanica MC09 10672516 YP_004513407.1 CDS Metme_2517 NC_015572.1 2772659 2773078 R hypothetical protein complement(2772659..2773078) Methylomonas methanica MC09 10672517 YP_004513408.1 CDS Metme_2518 NC_015572.1 2773758 2774420 R KEGG: ava:Ava_1652 O-methyltransferase; PFAM: O-methyltransferase, family 3; caffeoyl-CoA O-methyltransferase complement(2773758..2774420) Methylomonas methanica MC09 10672518 YP_004513409.1 CDS Metme_2519 NC_015572.1 2774776 2775354 D PFAM: Carbonic anhydrase; KEGG: mca:MCA0910 carbonic anhydrase; carbonic anhydrase 2774776..2775354 Methylomonas methanica MC09 10672519 YP_004513410.1 CDS Metme_2520 NC_015572.1 2775602 2776630 D PFAM: Secretion protein HlyD; KEGG: sfu:Sfum_2390 secretion protein HlyD family protein; secretion protein HlyD family protein 2775602..2776630 Methylomonas methanica MC09 10672520 YP_004513411.1 CDS Metme_2521 NC_015572.1 2776627 2778411 D PFAM: ABC transporter-like; KEGG: slt:Slit_2512 ABC transporter related protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 2776627..2778411 Methylomonas methanica MC09 10672521 YP_004513412.1 CDS Metme_2522 NC_015572.1 2778408 2779529 D PFAM: ABC-2 type transporter; KEGG: afr:AFE_2863 ABC transporter, permease; ABC transporter 2778408..2779529 Methylomonas methanica MC09 10672522 YP_004513413.1 CDS Metme_2523 NC_015572.1 2779533 2780645 D PFAM: ABC-2 type transporter; KEGG: sfu:Sfum_2393 ABC-2 type transporter; ABC transporter 2779533..2780645 Methylomonas methanica MC09 10672523 YP_004513414.1 CDS Metme_2524 NC_015572.1 2780742 2781602 R PFAM: Xylose isomerase, TIM barrel domain; KEGG: vei:Veis_3271 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein complement(2780742..2781602) Methylomonas methanica MC09 10672524 YP_004513415.1 CDS Metme_2525 NC_015572.1 2781747 2782682 R KEGG: mfa:Mfla_1761 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(2781747..2782682) Methylomonas methanica MC09 10672525 YP_004513416.1 CDS Metme_2526 NC_015572.1 2782679 2786056 R KEGG: mfa:Mfla_1762 periplasmic sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; integral membrane sensor hybrid histidine kinase complement(2782679..2786056) Methylomonas methanica MC09 10672526 YP_004513417.1 CDS Metme_2527 NC_015572.1 2786514 2787059 R KEGG: meh:M301_0031 hypothetical protein; hypothetical protein complement(2786514..2787059) Methylomonas methanica MC09 10672527 YP_004513418.1 CDS Metme_2528 NC_015572.1 2787519 2788262 R hypothetical protein complement(2787519..2788262) Methylomonas methanica MC09 10672528 YP_004513419.1 CDS Metme_2529 NC_015572.1 2788445 2789680 D KEGG: nwa:Nwat_0215 hypothetical protein; hypothetical protein 2788445..2789680 Methylomonas methanica MC09 10672529 YP_004513420.1 CDS Metme_2530 NC_015572.1 2789808 2791112 D TIGRFAM: ABC transporter, urea, substrate-binding, UrtA; KEGG: hch:HCH_04519 branched-chain amino acid ABC transporter periplasmic protein; urea ABC transporter, urea binding protein 2789808..2791112 Methylomonas methanica MC09 10672530 YP_004513421.1 CDS Metme_2531 NC_015572.1 2791299 2793008 D KEGG: hel:HELO_2272 ABC-type transport system permease; TIGRFAM: ABC transporter, urea, permease, UrtB; PFAM: Bacterial inner-membrane translocator; urea ABC transporter permease UrtB 2791299..2793008 Methylomonas methanica MC09 10672531 YP_004513422.1 CDS Metme_2532 NC_015572.1 2793126 2794238 D KEGG: abo:ABO_2511 branched-chain amino acid ABC transporter, permease; TIGRFAM: ABC transporter, urea, permease, UrtC; PFAM: Bacterial inner-membrane translocator; urea ABC transporter permease UrtC 2793126..2794238 Methylomonas methanica MC09 10672532 YP_004513423.1 CDS Metme_2533 NC_015572.1 2794235 2795041 D TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; KEGG: tau:Tola_1624 UreA ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter-like; urea ABC transporter ATP-binding protein UrtD 2794235..2795041 Methylomonas methanica MC09 10672533 YP_004513424.1 CDS Metme_2534 NC_015572.1 2795041 2795814 D SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtE; KEGG: tau:Tola_1623 UreA ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter-like; urea ABC transporter ATP-binding protein UrtE 2795041..2795814 Methylomonas methanica MC09 10672534 YP_004513425.1 CDS Metme_2535 NC_015572.1 2795832 2796095 D hypothetical protein 2795832..2796095 Methylomonas methanica MC09 10672535 YP_004513426.1 CDS Metme_2536 NC_015572.1 2796100 2796954 D KEGG: tau:Tola_1622 urease accessory protein UreD; HAMAP: Urease accessory protein UreD; PFAM: Urease accessory protein UreD; urease accessory protein ureD 2796100..2796954 Methylomonas methanica MC09 10672536 YP_004513427.1 CDS Metme_2537 NC_015572.1 2797082 2797384 D PFAM: Urease, alpha/gamma subunit; TIGRFAM: Urease, alpha/gamma subunit; HAMAP: Urease, gamma subunit; KEGG: npu:Npun_F0823 urease subunit gamma; urease subunit gamma 2797082..2797384 Methylomonas methanica MC09 10672537 YP_004513428.1 CDS Metme_2538 NC_015572.1 2797414 2797869 D KEGG: sua:Saut_0090 hypothetical protein; hypothetical protein 2797414..2797869 Methylomonas methanica MC09 10672538 YP_004513429.1 CDS Metme_2539 NC_015572.1 2797953 2798270 D PFAM: Urease, beta subunit; TIGRFAM: Urease, beta subunit; HAMAP: Urease subunit beta; KEGG: rpc:RPC_3695 urease subunit beta; urease subunit beta 2797953..2798270 Methylomonas methanica MC09 10672539 YP_004513430.1 CDS Metme_2540 NC_015572.1 2798267 2799970 D PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; TIGRFAM: Urease, alpha subunit; HAMAP: Urease subunit alpha; KEGG: ttu:TERTU_4206 urease subunit alpha; urease subunit alpha 2798267..2799970 Methylomonas methanica MC09 10672540 YP_004513431.1 CDS Metme_2541 NC_015572.1 2800515 2802302 D KEGG: pin:Ping_2386 signal transduction protein; signal transduction protein with Nacht domain 2800515..2802302 Methylomonas methanica MC09 10672541 YP_004513432.1 CDS Metme_2542 NC_015572.1 2802413 2802940 D KEGG: psa:PST_1052 transposase and inactivated derivative; transposase-like protein 2802413..2802940 Methylomonas methanica MC09 10672542 YP_004513433.1 CDS Metme_2543 NC_015572.1 2803269 2803799 D KEGG: kva:Kvar_0627 UreE urease accessory domain protein; HAMAP: Urease accessory protein ureE; PFAM: UreE urease accessory, C-terminal; UreE urease accessory, N-terminal; urease accessory protein ureE 2803269..2803799 Methylomonas methanica MC09 10672543 YP_004513434.1 CDS Metme_2544 NC_015572.1 2803789 2804463 D KEGG: aeh:Mlg_0186 urease accessory protein UreF; HAMAP: Urease accessory protein UreF; PFAM: Urease accessory protein UreF; urease accessory protein ureF 2803789..2804463 Methylomonas methanica MC09 10672544 YP_004513435.1 CDS Metme_2545 NC_015572.1 2804611 2805225 D TIGRFAM: Urease accessory protein UreG; HAMAP: Urease accessory protein UreG; KEGG: hch:HCH_04526 urease accessory protein UreG; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; urease accessory protein ureG 2804611..2805225 Methylomonas methanica MC09 10672545 YP_004513436.1 CDS Metme_2546 NC_015572.1 2805370 2806749 D TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: mms:mma_3335 L-serine dehydratase; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; L-serine dehydratase 1 2805370..2806749 Methylomonas methanica MC09 10672546 YP_004513437.1 CDS Metme_2547 NC_015572.1 2806753 2807880 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: hse:Hsero_4138 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted; GAF; GAF sensor-containing diguanylate cyclase complement(2806753..2807880) Methylomonas methanica MC09 10672547 YP_004513438.1 CDS Metme_2548 NC_015572.1 2807978 2810536 R KEGG: mca:MCA2485 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: Aconitase B, bacterial; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; aconitate hydratase 2 complement(2807978..2810536) Methylomonas methanica MC09 10672548 YP_004513439.1 CDS Metme_2549 NC_015572.1 2810591 2811205 R PFAM: Protein of unknown function DUF820; KEGG: nhl:Nhal_2824 protein of unknown function DUF820; hypothetical protein complement(2810591..2811205) Methylomonas methanica MC09 10672549 YP_004513440.1 CDS Metme_2550 NC_015572.1 2811248 2812258 R KEGG: mca:MCA3071 isocitrate dehydrogenase, NAD-dependent, PFAM: Isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase complement(2811248..2812258) Methylomonas methanica MC09 10672550 YP_004513441.1 CDS Metme_2551 NC_015572.1 2812555 2813469 D PFAM: ABC transporter-like; KEGG: ABC transporter-like protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 2812555..2813469 Methylomonas methanica MC09 10672551 YP_004513442.1 CDS Metme_2552 NC_015572.1 2813466 2814758 D KEGG: hypothetical protein; hypothetical protein 2813466..2814758 Methylomonas methanica MC09 10672552 YP_004513443.1 CDS Metme_2553 NC_015572.1 2814772 2815641 D PFAM: Ion transport; KEGG: pca:Pcar_0515 ion transport protein; Ion transport protein 2814772..2815641 Methylomonas methanica MC09 10672553 YP_004513444.1 CDS Metme_2554 NC_015572.1 2815902 2817611 D PFAM: YkuD domain; Peptidoglycan binding-like; KEGG: mca:MCA1003 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2815902..2817611 Methylomonas methanica MC09 10672554 YP_004513445.1 CDS Metme_2555 NC_015572.1 2817638 2818228 R PFAM: Protein of unknown function DUF882, bacterial; KEGG: aeh:Mlg_1034 hypothetical protein; hypothetical protein complement(2817638..2818228) Methylomonas methanica MC09 10672555 YP_004513446.1 CDS Metme_2556 NC_015572.1 2818487 2819659 D PFAM: Aminotransferase class-III; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: mca:MCA2079 acetylornithine aminotransferase; acetylornithine/succinyldiaminopimelate aminotransferase 2818487..2819659 Methylomonas methanica MC09 10672556 YP_004513447.1 CDS Metme_2557 NC_015572.1 2819667 2820566 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: mca:MCA2080 ornithine carbamoyltransferase; ornithine carbamoyltransferase 2819667..2820566 Methylomonas methanica MC09 10672557 YP_004513448.1 CDS Metme_2558 NC_015572.1 2820598 2821251 D SMART: Bacterial SH3-like region; KEGG: nhl:Nhal_3273 SH3 type 3 domain protein; SH3 domain-containing protein 2820598..2821251 Methylomonas methanica MC09 10672558 YP_004513449.1 CDS Metme_2559 NC_015572.1 2821348 2823207 D PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: aav:Aave_1506 dihydroxy-acid dehydratase; Dihydroxy-acid dehydratase 2821348..2823207 Methylomonas methanica MC09 10672559 YP_004513450.1 CDS Metme_2560 NC_015572.1 2823390 2824223 D PFAM: ATPase associated with various cellular activities, AAA-4; KEGG: gfo:GFO_1196 divergent AAA domain-containing protein; ATPase AAA 2823390..2824223 Methylomonas methanica MC09 10672560 YP_004513451.1 CDS Metme_2561 NC_015572.1 2824253 2826478 D KEGG: rpt:Rpal_4028 hypothetical protein; hypothetical protein 2824253..2826478 Methylomonas methanica MC09 10672561 YP_004513452.1 CDS Metme_2562 NC_015572.1 2826480 2827508 D TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: cni:Calni_0302 udp-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 2826480..2827508 Methylomonas methanica MC09 10672562 YP_004513453.1 CDS Metme_2563 NC_015572.1 2827532 2828203 D TIGRFAM: Ribose 5-phosphate isomerase; KEGG: meh:M301_1566 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 2827532..2828203 Methylomonas methanica MC09 10672563 YP_004513454.1 CDS Metme_2564 NC_015572.1 2828285 2830609 R PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: neu:NE1536 TonB-dependent receptor protein; TonB-dependent receptor complement(2828285..2830609) Methylomonas methanica MC09 10672564 YP_004513455.1 CDS Metme_2565 NC_015572.1 2830990 2832222 R KEGG: hch:HCH_03572 BNR/Asp-box repeat-containing protein; BNR/Asp-box repeat-containing protein complement(2830990..2832222) Methylomonas methanica MC09 10672565 YP_004513456.1 CDS Metme_2566 NC_015572.1 2832450 2832740 R PFAM: Protein of unknown function DUF861, cupin-3; KEGG: mep:MPQ_1489 hypothetical protein; hypothetical protein complement(2832450..2832740) Methylomonas methanica MC09 10672566 YP_004513457.1 CDS Metme_2567 NC_015572.1 2832795 2833793 R KEGG: ant:Arnit_2252 lipopolysaccharide heptosyltransferase I; TIGRFAM: Lipopolysaccharide heptosyltransferase I; PFAM: Glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase I complement(2832795..2833793) Methylomonas methanica MC09 10672567 YP_004513458.1 CDS Metme_2568 NC_015572.1 2833797 2834795 R KEGG: ppw:PputW619_4862 lipopolysaccharide heptosyltransferase II; TIGRFAM: Lipopolysaccharide heptosyltransferase II; PFAM: Glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase II complement(2833797..2834795) Methylomonas methanica MC09 10672568 YP_004513459.1 CDS Metme_2569 NC_015572.1 2834796 2835725 R TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: mca:MCA2344 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; branched-chain amino acid aminotransferase complement(2834796..2835725) Methylomonas methanica MC09 10672569 YP_004513460.1 CDS Metme_2570 NC_015572.1 2836162 2836353 D hypothetical protein 2836162..2836353 Methylomonas methanica MC09 10672570 YP_004513461.1 CDS Metme_2571 NC_015572.1 2836317 2837345 R PFAM: Peptidase M48, Ste24p; KEGG: app:CAP2UW1_1582 peptidase M48 Ste24p; peptidase M48 Ste24p complement(2836317..2837345) Methylomonas methanica MC09 10672571 YP_004513462.1 CDS Metme_2573 NC_015572.1 2838635 2839243 R PFAM: Heat shock protein Hsp20; KEGG: cni:Calni_1043 heat shock protein HSP20; heat shock protein Hsp20 complement(2838635..2839243) Methylomonas methanica MC09 10672573 YP_004513463.1 CDS Metme_2574 NC_015572.1 2839353 2839769 R KEGG: ttu:TERTU_1565 hypothetical protein; hypothetical protein complement(2839353..2839769) Methylomonas methanica MC09 10672574 YP_004513464.1 CDS Metme_2575 NC_015572.1 2840045 2841451 R KEGG: gca:Galf_2013 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; integral membrane sensor signal transduction histidine kinase complement(2840045..2841451) Methylomonas methanica MC09 10672575 YP_004513465.1 CDS Metme_2576 NC_015572.1 2841454 2842173 R KEGG: dar:Daro_0704 response regulator receiver:transcriptional regulatory protein, C-terminal; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator complement(2841454..2842173) Methylomonas methanica MC09 10672576 YP_004513466.1 CDS Metme_2577 NC_015572.1 2842321 2842779 D KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related; hypothetical protein 2842321..2842779 Methylomonas methanica MC09 10672577 YP_004513467.1 CDS Metme_2578 NC_015572.1 2842831 2844036 R PFAM: Protein of unknown function DUF214, permase predicted; KEGG: sfr:Sfri_1812 hypothetical protein; hypothetical protein complement(2842831..2844036) Methylomonas methanica MC09 10672578 YP_004513468.1 CDS Metme_2579 NC_015572.1 2844030 2844740 R PFAM: ABC transporter-like; KEGG: sfu:Sfum_1083 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase complement(2844030..2844740) Methylomonas methanica MC09 10672579 YP_004513469.1 CDS Metme_2580 NC_015572.1 2844737 2846002 R KEGG: hna:Hneap_0782 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(2844737..2846002) Methylomonas methanica MC09 10672580 YP_004513470.1 CDS Metme_2581 NC_015572.1 2845995 2847428 R KEGG: sat:SYN_00851 type I secretion outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(2845995..2847428) Methylomonas methanica MC09 10672581 YP_004513471.1 CDS Metme_2582 NC_015572.1 2847436 2848722 R KEGG: mca:MCA1811 hypothetical protein; hypothetical protein complement(2847436..2848722) Methylomonas methanica MC09 10672582 YP_004513472.1 CDS Metme_2583 NC_015572.1 2848891 2849580 R PFAM: EF-Hand domain; KEGG: azo:azo3617 calcium binding protein; EF hand repeat-containing protein complement(2848891..2849580) Methylomonas methanica MC09 10672583 YP_004513473.1 CDS Metme_2584 NC_015572.1 2850025 2850231 D hypothetical protein 2850025..2850231 Methylomonas methanica MC09 10672584 YP_004513474.1 CDS Metme_2585 NC_015572.1 2850568 2851701 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mca:MCA2593 carboxynorspermidine decarboxylase; Orn/DAP/Arg decarboxylase 2 complement(2850568..2851701) Methylomonas methanica MC09 10672585 YP_004513475.1 CDS Metme_2586 NC_015572.1 2851698 2852294 R KEGG: rba:RB5405 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(2851698..2852294) Methylomonas methanica MC09 10672586 YP_004513476.1 CDS Metme_2587 NC_015572.1 2852287 2853222 R PFAM: tRNA isopentenyltransferase; Isopentenyl transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: mca:MCA1691 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase; tRNA dimethylallyltransferase complement(2852287..2853222) Methylomonas methanica MC09 10672587 YP_004513477.1 CDS Metme_2588 NC_015572.1 2853223 2855112 R TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: mca:MCA1692 DNA mismatch repair protein; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; DNA mismatch repair protein mutL complement(2853223..2855112) Methylomonas methanica MC09 10672588 YP_004513478.1 CDS Metme_2589 NC_015572.1 2855197 2856639 R KEGG: nhl:Nhal_3430 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup; cell wall hydrolase/autolysin complement(2855197..2856639) Methylomonas methanica MC09 10672589 YP_004513479.1 CDS Metme_2590 NC_015572.1 2856679 2857149 R KEGG: ddd:Dda3937_00438 ATPase with strong ADP affinity; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein complement(2856679..2857149) Methylomonas methanica MC09 10672590 YP_004513480.1 CDS Metme_2591 NC_015572.1 2857149 2858609 R KEGG: tgr:Tgr7_0892 carbohydrate kinase, YjeF related protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; hypothetical protein complement(2857149..2858609) Methylomonas methanica MC09 10672591 YP_004513481.1 CDS Metme_2592 NC_015572.1 2858662 2859738 D KEGG: alv:Alvin_1059 iron-sulfur cluster binding protein; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; iron-sulfur cluster binding protein 2858662..2859738 Methylomonas methanica MC09 10672592 YP_004513482.1 CDS Metme_2593 NC_015572.1 2859897 2861078 D KEGG: alv:Alvin_0361 aminotransferase class I and II protein; PFAM: Aminotransferase, class I/II; aspartate transaminase 2859897..2861078 Methylomonas methanica MC09 10672593 YP_004513483.1 CDS Metme_2594 NC_015572.1 2861159 2861632 R PFAM: Protein of unknown function DUF88; KEGG: shn:Shewana3_1080 hypothetical protein; hypothetical protein complement(2861159..2861632) Methylomonas methanica MC09 10672594 YP_004513484.1 CDS Metme_2595 NC_015572.1 2861638 2861949 R KEGG: gsu:GSU1328 hypothetical protein; HAMAP: Protein of unknown function DUF1255; PFAM: Protein of unknown function DUF1255; hypothetical protein complement(2861638..2861949) Methylomonas methanica MC09 10672595 YP_004513485.1 CDS Metme_2596 NC_015572.1 2861992 2862567 R PFAM: rRNA methylase; KEGG: rmr:Rmar_1203 rRNA methylase; rRNA methylase complement(2861992..2862567) Methylomonas methanica MC09 10672596 YP_004513486.1 CDS Metme_2597 NC_015572.1 2862545 2863600 R PFAM: FAD dependent oxidoreductase; KEGG: rbi:RB2501_09025 hypothetical protein; FAD dependent oxidoreductase complement(2862545..2863600) Methylomonas methanica MC09 10672597 YP_004513487.1 CDS Metme_2598 NC_015572.1 2863590 2863949 R PFAM: HopJ type III effector protein; KEGG: fba:FIC_00454 type III effector HopPmaJ; HopJ type III effector protein complement(2863590..2863949) Methylomonas methanica MC09 10672598 YP_004513488.1 CDS Metme_2599 NC_015572.1 2864171 2864830 D PFAM: Polysaccharide export protein; KEGG: nhl:Nhal_3337 polysaccharide export protein; polysaccharide export protein 2864171..2864830 Methylomonas methanica MC09 10672599 YP_004513489.1 CDS Metme_2600 NC_015572.1 2864857 2866155 D KEGG: nhl:Nhal_3336 hypothetical protein; hypothetical protein 2864857..2866155 Methylomonas methanica MC09 10672600 YP_004513490.1 CDS Metme_2601 NC_015572.1 2866157 2867902 D PFAM: Lipopolysaccharide biosynthesis; KEGG: nde:NIDE2408 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 2866157..2867902 Methylomonas methanica MC09 10672601 YP_004513491.1 CDS Metme_2602 NC_015572.1 2867919 2868698 D TIGRFAM: Exopolysaccharide synthesis protein; KEGG: nhl:Nhal_3333 tyrosine-protein kinase; capsular exopolysaccharide family protein 2867919..2868698 Methylomonas methanica MC09 10672602 YP_004513492.1 CDS Metme_2603 NC_015572.1 2868793 2871192 R PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: nde:NIDE2405 hypothetical protein; hypothetical protein complement(2868793..2871192) Methylomonas methanica MC09 10672603 YP_004513493.1 CDS Metme_2604 NC_015572.1 2871418 2872053 D KEGG: mca:MCA0039 dihydroxyacetone phosphatase; TIGRFAM: Dihydroxyacetone kinase, subunit L; PFAM: Dak phosphatase; dihydroxyacetone kinase subunit DhaL 2871418..2872053 Methylomonas methanica MC09 10672604 YP_004513494.1 CDS Metme_2605 NC_015572.1 2872085 2873071 R TIGRFAM: Dihydroxyacetone kinase DhaK, subunit 1; KEGG: mca:MCA0040 dihydroxyacetone kinase; PFAM: Dak kinase; dihydroxyacetone kinase subunit DhaK complement(2872085..2873071) Methylomonas methanica MC09 10672605 YP_004513495.1 CDS Metme_2606 NC_015572.1 2873088 2873891 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; KEGG: tra:Trad_1483 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(2873088..2873891) Methylomonas methanica MC09 10672606 YP_004513496.1 CDS Metme_2607 NC_015572.1 2874524 2875795 D PFAM: Autotransporter beta-domain; KEGG: nde:NIDE2008 outer membrane autotransporter; autotransporter beta- domain-containing protein 2874524..2875795 Methylomonas methanica MC09 10672608 YP_004513497.1 CDS Metme_2608 NC_015572.1 2875850 2876707 R KEGG: nhl:Nhal_0827 hypothetical protein; hypothetical protein complement(2875850..2876707) Methylomonas methanica MC09 10672609 YP_004513498.1 CDS Metme_2609 NC_015572.1 2876708 2880391 R PFAM: WD40 repeat, subgroup; KEGG: mac:MA2525 WD-40 repeat-containing protein; hypothetical protein complement(2876708..2880391) Methylomonas methanica MC09 10672610 YP_004513499.1 CDS Metme_2610 NC_015572.1 2880397 2881836 R SMART: Toll-Interleukin receptor; KEGG: app:CAP2UW1_3023 hypothetical protein; TIR protein complement(2880397..2881836) Methylomonas methanica MC09 10672611 YP_004513500.1 CDS Metme_2611 NC_015572.1 2881957 2882394 R PFAM: NUDIX hydrolase domain; KEGG: mca:MCA0519 MutT/NUDIX family protein; NUDIX hydrolase complement(2881957..2882394) Methylomonas methanica MC09 10672612 YP_004513501.1 CDS Metme_2612 NC_015572.1 2882499 2883428 D PFAM: Histone deacetylase superfamily; KEGG: mca:MCA2486 histone deacetylase/AcuC/AphA family protein; histone deacetylase superfamily protein 2882499..2883428 Methylomonas methanica MC09 10672613 YP_004513502.1 CDS Metme_2613 NC_015572.1 2883474 2883962 R KEGG: cps:CPS_2544 cytochrome P460; cytochrome P460 complement(2883474..2883962) Methylomonas methanica MC09 10672614 YP_004513503.1 CDS Metme_2614 NC_015572.1 2884212 2884562 D hypothetical protein 2884212..2884562 Methylomonas methanica MC09 10672615 YP_004513504.1 CDS Metme_2615 NC_015572.1 2884727 2886808 D PFAM: Carbon starvation protein CstA; KEGG: mca:MCA2607 carbon starvation protein CstA; carbon starvation protein CstA 2884727..2886808 Methylomonas methanica MC09 10672616 YP_004513505.1 CDS Metme_2618 NC_015572.1 2888496 2889764 D hypothetical protein 2888496..2889764 Methylomonas methanica MC09 10672619 YP_004513506.1 CDS Metme_2621 NC_015572.1 2890369 2891400 R KEGG: kko:Kkor_2085 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; 1-aminocyclopropane-1-carboxylate deaminase complement(2890369..2891400) Methylomonas methanica MC09 10672622 YP_004513507.1 CDS Metme_2622 NC_015572.1 2891379 2892194 R PFAM: Dihydropteroate synthase, DHPS; manually curated; KEGG: alv:Alvin_2126 dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; dihydropteroate synthase complement(2891379..2892194) Methylomonas methanica MC09 10672623 YP_004513508.1 CDS Metme_2623 NC_015572.1 2892305 2893963 D PFAM: Protein of unknown function DUF87; KEGG: mca:MCA1687 hypothetical protein; hypothetical protein 2892305..2893963 Methylomonas methanica MC09 10672624 YP_004513509.1 CDS Metme_2624 NC_015572.1 2894028 2894237 R PFAM: Protein of unknown function DUF539; KEGG: mca:MCA2383 hypothetical protein; hypothetical protein complement(2894028..2894237) Methylomonas methanica MC09 10672625 YP_004513510.1 CDS Metme_2625 NC_015572.1 2894329 2895549 R PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; Oxidoreductase FAD-binding region; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit F; KEGG: mca:MCA2384 Na(+)-translocating NADH-quinone reductase subunit F; Na(+)-translocating NADH-quinone reductase subunit F complement(2894329..2895549) Methylomonas methanica MC09 10672626 YP_004513511.1 CDS Metme_2626 NC_015572.1 2895560 2896168 R TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit E; KEGG: mca:MCA2385 Na(+)-translocating NADH-quinone reductase subunit E; PFAM: Electron transport complex, Rnf/Nqr; Na(+)-translocating NADH-quinone reductase subunit E complement(2895560..2896168) Methylomonas methanica MC09 10672627 YP_004513512.1 CDS Metme_2627 NC_015572.1 2896168 2896836 R KEGG: mca:MCA2386 Na(+)-translocating NADH-quinone reductase subunit D; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; PFAM: Electron transport complex, Rnf/Nqr; NADH:ubiquinone oxidoreductase subunit D complement(2896168..2896836) Methylomonas methanica MC09 10672628 YP_004513513.1 CDS Metme_2628 NC_015572.1 2896848 2897708 R KEGG: mca:MCA2387 Na(+)-translocating NADH-quinone reductase subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; PFAM: FMN-binding; NADH:ubiquinone oxidoreductase subunit C complement(2896848..2897708) Methylomonas methanica MC09 10672629 YP_004513514.1 CDS Metme_2629 NC_015572.1 2897701 2898900 R KEGG: mca:MCA2388 Na(+)-translocating NADH-quinone reductase subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; PFAM: NADH-quinone reductase NQR2/RnfD; NADH:ubiquinone oxidoreductase subunit B complement(2897701..2898900) Methylomonas methanica MC09 10672630 YP_004513515.1 CDS Metme_2630 NC_015572.1 2898901 2900247 R TIGRFAM: Na-translocating NADH-quinone reductase subunit A; HAMAP: Na(+)-translocating NADH-quinone reductase subunit A; KEGG: mca:MCA2389 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A; Na(+)-translocating NADH-quinone reductase subunit A complement(2898901..2900247) Methylomonas methanica MC09 10672631 YP_004513516.1 CDS Metme_2631 NC_015572.1 2900423 2901151 R PFAM: Metallophosphoesterase; KEGG: pnu:Pnuc_0863 metallophosphoesterase; metallophosphoesterase complement(2900423..2901151) Methylomonas methanica MC09 10672632 YP_004513517.1 CDS Metme_2632 NC_015572.1 2901255 2902475 D TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: mca:MCA2483 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2901255..2902475 Methylomonas methanica MC09 10672633 YP_004513518.1 CDS Metme_2633 NC_015572.1 2902534 2903709 R PFAM: NnrS; KEGG: tbd:Tbd_1409 hypothetical protein; NnrS family protein complement(2902534..2903709) Methylomonas methanica MC09 10672634 YP_004513519.1 CDS Metme_2634 NC_015572.1 2903699 2904616 R PFAM: Protein of unknown function DUF455; KEGG: mca:MCA2484 hypothetical protein; hypothetical protein complement(2903699..2904616) Methylomonas methanica MC09 10672635 YP_004513520.1 CDS Metme_2635 NC_015572.1 2904955 2906652 D PFAM: Peptidase M48, Ste24p; KEGG: peptidase M48 ste24p; peptidase M48 Ste24p 2904955..2906652 Methylomonas methanica MC09 10672636 YP_004513521.1 CDS Metme_2636 NC_015572.1 2906828 2907514 D PFAM: Sporulation/cell division region, bacteria; KEGG: sus:Acid_4099 sporulation domain-containing protein; sporulation domain-containing protein 2906828..2907514 Methylomonas methanica MC09 10672637 YP_004513522.1 CDS Metme_2637 NC_015572.1 2907532 2911023 R SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: mca:MCA1286 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA polymerase III subunit alpha complement(2907532..2911023) Methylomonas methanica MC09 10672638 YP_004513523.1 CDS Metme_2638 NC_015572.1 2911020 2911619 R KEGG: psm:PSM_A2079 RNAse HII; PFAM: Ribonuclease HII/HIII; Ribonuclease H complement(2911020..2911619) Methylomonas methanica MC09 10672639 YP_004513524.1 CDS Metme_2639 NC_015572.1 2911594 2912364 R TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; HAMAP: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: mca:MCA2444 UDP-N-acetylglucosamine acyltransferase; acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase complement(2911594..2912364) Methylomonas methanica MC09 10672640 YP_004513525.1 CDS Metme_2640 NC_015572.1 2912365 2912808 R TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; KEGG: mca:MCA2445 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; (3R)-hydroxymyristoyl-ACP dehydratase complement(2912365..2912808) Methylomonas methanica MC09 10672641 YP_004513526.1 CDS Metme_2641 NC_015572.1 2912893 2913390 R PFAM: Outer membrane chaperone Skp (OmpH); KEGG: mca:MCA2446 outer membrane protein OmpH; outer membrane chaperone Skp complement(2912893..2913390) Methylomonas methanica MC09 10672642 YP_004513527.1 CDS Metme_2642 NC_015572.1 2913481 2915775 R KEGG: mca:MCA2447 OMP85 family outer membrane protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; outer membrane protein assembly complex, YaeT protein complement(2913481..2915775) Methylomonas methanica MC09 10672643 YP_004513528.1 CDS Metme_2643 NC_015572.1 2915979 2917271 R PFAM: Flavocytochrome c sulphide dehydrogenase, flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cte:CT2081 sulfide dehydrogenase, flavoprotein subunit; flavocytochrome c sulfide dehydrogenase flavin-binding protein complement(2915979..2917271) Methylomonas methanica MC09 10672644 YP_004513529.1 CDS Metme_2644 NC_015572.1 2917275 2917565 R KEGG: tin:Tint_2898 cytochrome c class I; hypothetical protein complement(2917275..2917565) Methylomonas methanica MC09 10672645 YP_004513530.1 CDS Metme_2645 NC_015572.1 2917568 2918311 R KEGG: mca:MCA1975 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; TrmH family RNA methyltransferase complement(2917568..2918311) Methylomonas methanica MC09 10672646 YP_004513531.1 CDS Metme_2646 NC_015572.1 2918308 2920617 R TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribonuclease R winged-helix domain; Ribosomal protein S1, RNA binding domain; KEGG: mca:MCA1976 ribonuclease R; SMART: Cold shock protein; ribonuclease R complement(2918308..2920617) Methylomonas methanica MC09 10672647 YP_004513532.1 CDS Metme_2647 NC_015572.1 2920683 2922272 R KEGG: meh:M301_2440 hypothetical protein; hypothetical protein complement(2920683..2922272) Methylomonas methanica MC09 10672648 YP_004513533.1 CDS Metme_2648 NC_015572.1 2922542 2922988 R KEGG: xop:PXO_00870 hypothetical protein; hypothetical protein complement(2922542..2922988) Methylomonas methanica MC09 10672649 YP_004513534.1 CDS Metme_2649 NC_015572.1 2923074 2926016 R PFAM: Protein of unknown function DUF748; KEGG: pen:PSEEN4740 hypothetical protein; hypothetical protein complement(2923074..2926016) Methylomonas methanica MC09 10672650 YP_004513535.1 CDS Metme_2650 NC_015572.1 2926030 2927808 R hypothetical protein complement(2926030..2927808) Methylomonas methanica MC09 10672651 YP_004513536.1 CDS Metme_2651 NC_015572.1 2927932 2928342 R KEGG: mca:MCA1817 heat shock protein 15; PFAM: RNA-binding S4; SMART: RNA-binding S4; RNA-binding S4 domain-containing protein complement(2927932..2928342) Methylomonas methanica MC09 10672652 YP_004513537.1 CDS Metme_2652 NC_015572.1 2928323 2928682 R KEGG: mca:MCA1816 rhodanese-like domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein complement(2928323..2928682) Methylomonas methanica MC09 10672653 YP_004513538.1 CDS Metme_2653 NC_015572.1 2928721 2929677 R PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: mca:MCA1815 hydroxymethylbutenyl pyrophosphate reductase; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2928721..2929677) Methylomonas methanica MC09 10672654 YP_004513539.1 CDS Metme_2654 NC_015572.1 2929716 2930201 R TIGRFAM: Ribonuclease E inhibitor RraA; HAMAP: Ribonuclease E inhibitor RraA; KEGG: mca:MCA1813 ribonuclease activity regulator protein RraA; PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; Regulator of ribonuclease activity A complement(2929716..2930201) Methylomonas methanica MC09 10672655 YP_004513540.1 CDS Metme_2655 NC_015572.1 2930220 2931575 R PFAM: Peptidase U32; KEGG: mca:MCA1812 U32 family peptidase; peptidase U32 complement(2930220..2931575) Methylomonas methanica MC09 10672656 YP_004513541.1 CDS Metme_2656 NC_015572.1 2931710 2932261 R TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: ppw:PputW619_1394 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(2931710..2932261) Methylomonas methanica MC09 10672657 YP_004513542.1 CDS Metme_2657 NC_015572.1 2932261 2933145 R TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: meh:M301_1165 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase complement(2932261..2933145) Methylomonas methanica MC09 10672658 YP_004513543.1 CDS Metme_2658 NC_015572.1 2933142 2934044 R TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: meh:M301_1164 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(2933142..2934044) Methylomonas methanica MC09 10672659 YP_004513544.1 CDS Metme_2659 NC_015572.1 2934069 2935139 R TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: ppg:PputGB1_1380 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase complement(2934069..2935139) Methylomonas methanica MC09 10672660 YP_004513545.1 CDS Metme_2660 NC_015572.1 2935249 2935935 R PFAM: ATP-binding region, ATPase-like; KEGG: cja:CJA_1810 sensor histidine kinase; histidine kinase complement(2935249..2935935) Methylomonas methanica MC09 10672661 YP_004513546.1 CDS Metme_2661 NC_015572.1 2935932 2937566 R KEGG: rfr:Rfer_0477 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; Tetratricopeptide TPR-4; Tetratricopeptide TPR2; SMART: Signal transduction response regulator, receiver region; Tetratricopeptide repeat; response regulator receiver protein complement(2935932..2937566) Methylomonas methanica MC09 10672662 YP_004513547.1 CDS Metme_2662 NC_015572.1 2937696 2938163 R PFAM: GCN5-related N-acetyltransferase; KEGG: cja:CJA_0478 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(2937696..2938163) Methylomonas methanica MC09 10672663 YP_004513548.1 CDS Metme_2663 NC_015572.1 2938193 2938417 R PFAM: Addiction module component, CHP02574; KEGG: cph:Cpha266_0253 addiction module component; addiction module protein complement(2938193..2938417) Methylomonas methanica MC09 10672664 YP_004513549.1 CDS Metme_2664 NC_015572.1 2938455 2939000 D hypothetical protein 2938455..2939000 Methylomonas methanica MC09 10672665 YP_004513550.1 CDS Metme_2665 NC_015572.1 2938906 2939667 R KEGG: sde:Sde_2333 hypothetical protein; hypothetical protein complement(2938906..2939667) Methylomonas methanica MC09 10672666 YP_004513551.1 CDS Metme_2666 NC_015572.1 2939712 2940476 R PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ctu:Ctu_15240 3-deoxy-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(2939712..2940476) Methylomonas methanica MC09 10672667 YP_004513552.1 CDS Metme_2667 NC_015572.1 2940473 2940664 R KEGG: tmz:Tmz1t_3214 protein of unknown function DUF343; HAMAP: UPF0434 protein ycaR; PFAM: Protein of unknown function DUF343; hypothetical protein complement(2940473..2940664) Methylomonas methanica MC09 10672668 YP_004513553.1 CDS Metme_2668 NC_015572.1 2940645 2941658 R PFAM: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: nhl:Nhal_0526 tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase complement(2940645..2941658) Methylomonas methanica MC09 10672669 YP_004513554.1 CDS Metme_2669 NC_015572.1 2941655 2942089 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: avn:Avin_14750 biopolymer transport protein ExbD; biopolymer transport protein ExbD/TolR complement(2941655..2942089) Methylomonas methanica MC09 10672670 YP_004513555.1 CDS Metme_2670 NC_015572.1 2942089 2942703 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: nhl:Nhal_0529 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(2942089..2942703) Methylomonas methanica MC09 10672671 YP_004513556.1 CDS Metme_2671 NC_015572.1 2942737 2943891 R PFAM: Major facilitator superfamily MFS-1; KEGG: nwa:Nwat_0285 major facilitator superfamily protein; major facilitator superfamily protein complement(2942737..2943891) Methylomonas methanica MC09 10672672 YP_004513557.1 CDS Metme_2672 NC_015572.1 2943892 2944980 R TIGRFAM: Chorismate synthase; KEGG: maq:Maqu_1568 chorismate synthase; PFAM: Chorismate synthase; chorismate synthase complement(2943892..2944980) Methylomonas methanica MC09 10672673 YP_004513558.1 CDS Metme_2673 NC_015572.1 2944984 2945913 R TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; KEGG: mca:MCA0701 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific complement(2944984..2945913) Methylomonas methanica MC09 10672674 YP_004513559.1 CDS Metme_2674 NC_015572.1 2945988 2946866 D KEGG: hch:HCH_05853 signal transduction protein; TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD; signal transduction protein 2945988..2946866 Methylomonas methanica MC09 10672675 YP_004513560.1 CDS Metme_2675 NC_015572.1 2946869 2948095 R TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: aav:Aave_0770 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; amidohydrolase complement(2946869..2948095) Methylomonas methanica MC09 10672676 YP_004513561.1 CDS Metme_2676 NC_015572.1 2948742 2949503 R KEGG: alv:Alvin_2150 bis(5'nucleosyl)-tetraphosphatase ApaH; bis(5'-nucleosyl)-tetraphosphatase complement(2948742..2949503) Methylomonas methanica MC09 10672678 YP_004513562.1 CDS Metme_2677 NC_015572.1 2949539 2949904 R KEGG: avn:Avin_48710 hypothetical protein; hypothetical protein complement(2949539..2949904) Methylomonas methanica MC09 10672679 YP_004513563.1 CDS Metme_2678 NC_015572.1 2949894 2950262 R PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: avn:Avin_48700 metallocluster binding protein of the NafY/NifY/NifX/VnfX family; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(2949894..2950262) Methylomonas methanica MC09 10672680 YP_004513564.1 CDS Metme_2679 NC_015572.1 2950693 2951820 R TIGRFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; KEGG: mca:MCA2479 oxaloacetate decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta complement(2950693..2951820) Methylomonas methanica MC09 10672681 YP_004513565.1 CDS Metme_2680 NC_015572.1 2951879 2953693 R TIGRFAM: Oxaloacetate decarboxylase, alpha subunit; KEGG: mca:MCA2480 oxaloacetate decarboxylase; PFAM: Conserved carboxylase region; Pyruvate carboxyltransferase; Biotin/lipoyl attachment; oxaloacetate decarboxylase subunit alpha complement(2951879..2953693) Methylomonas methanica MC09 10672682 YP_004513566.1 CDS Metme_2681 NC_015572.1 2953785 2954102 R manually curated; TIGRFAM: Sodium ion-translocating decarboxylase; KEGG: kko:Kkor_1244 sodium pump decarboxylase, gamma subunit; PFAM: Sodium ion-translocating decarboxylase; sodium pump decarboxylase subunit gamma complement(2953785..2954102) Methylomonas methanica MC09 10672683 YP_004513567.1 CDS Metme_2682 NC_015572.1 2954215 2955126 D PFAM: Carbohydrate/purine kinase; KEGG: mca:MCA0970 carbohydrate kinase; PfkB domain-containing protein 2954215..2955126 Methylomonas methanica MC09 10672684 YP_004513568.1 CDS Metme_2683 NC_015572.1 2955123 2956007 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: azl:AZL_c04930 transcriptional regulator; LysR family transcriptional regulator complement(2955123..2956007) Methylomonas methanica MC09 10672685 YP_004513569.1 CDS Metme_2684 NC_015572.1 2956170 2958473 R TIGRFAM: Penicillin-binding protein 1C; KEGG: penicillin-binding protein 1C; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; Penicillin-binding, C-terminal; penicillin-binding protein 1C complement(2956170..2958473) Methylomonas methanica MC09 10672686 YP_004513570.1 CDS Metme_2685 NC_015572.1 2958724 2961792 R TIGRFAM: Ammonium transporter; PAS; Diguanylate cyclase, predicted; PFAM: Ammonium transporter; PAS fold; Diguanylate cyclase, predicted; Diguanylate phosphodiesterase, predicted; KEGG: mmw:Mmwyl1_3988 PAS/PAC and GAF sensor(S)-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2958724..2961792) Methylomonas methanica MC09 10672687 YP_004513571.1 CDS Metme_2687 NC_015572.1 2963794 2965158 R KEGG: eba:p1B277 transposase; transposase complement(2963794..2965158) Methylomonas methanica MC09 10672689 YP_004513572.1 CDS Metme_2688 NC_015572.1 2965222 2965812 R PFAM: Nucleotide-binding protein, predicted, TIR-like; KEGG: pin:Ping_2305 nucleic acid-binding protein; nucleotide-binding protein complement(2965222..2965812) Methylomonas methanica MC09 10672690 YP_004513573.1 CDS Metme_2689 NC_015572.1 2965884 2966567 R KEGG: ttu:TERTU_1636 ribonucleotide reductase, alpha subunit; ribonucleotide reductase subunit alpha complement(2965884..2966567) Methylomonas methanica MC09 10672691 YP_004513574.1 CDS Metme_2690 NC_015572.1 2966589 2966981 R hypothetical protein complement(2966589..2966981) Methylomonas methanica MC09 10672692 YP_004513575.1 CDS Metme_2691 NC_015572.1 2967043 2969193 R TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase large subunit, C-terminal; ribonucleoside-diphosphate reductase complement(2967043..2969193) Methylomonas methanica MC09 10672693 YP_004513576.1 CDS Metme_2692 NC_015572.1 2969491 2973711 R KEGG: cyn:Cyan7425_5008 non-specific serine/threonine protein kinase; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SNF2-like protein complement(2969491..2973711) Methylomonas methanica MC09 10672694 YP_004513577.1 CDS Metme_2693 NC_015572.1 2973789 2974676 R TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: nmu:Nmul_A1080 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha complement(2973789..2974676) Methylomonas methanica MC09 10672695 YP_004513578.1 CDS Metme_2694 NC_015572.1 2974686 2975867 R PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: nmu:Nmul_A1079 malate--CoA ligase subunit beta; succinyl-CoA ligase subunit beta complement(2974686..2975867) Methylomonas methanica MC09 10672696 YP_004513579.1 CDS Metme_2695 NC_015572.1 2975982 2976935 R KEGG: net:Neut_0607 citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; citryl-CoA lyase complement(2975982..2976935) Methylomonas methanica MC09 10672697 YP_004513580.1 CDS Metme_2696 NC_015572.1 2977033 2977137 D hypothetical protein 2977033..2977137 Methylomonas methanica MC09 10672698 YP_004513581.1 CDS Metme_2697 NC_015572.1 2977159 2978325 D KEGG: mca:MCA1406 serine--glyoxylate aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; serine--glyoxylate transaminase 2977159..2978325 Methylomonas methanica MC09 10672699 YP_004513582.1 CDS Metme_2698 NC_015572.1 2978379 2978507 R manually curated; hypothetical protein complement(2978379..2978507) Methylomonas methanica MC09 10672700 YP_004513583.1 CDS Metme_2699 NC_015572.1 2978504 2979901 R PFAM: Major facilitator superfamily MFS-1; KEGG: har:HEAR3449 major facilitator superfamily permease; major facilitator superfamily protein complement(2978504..2979901) Methylomonas methanica MC09 10672701 YP_004513584.1 CDS Metme_2700 NC_015572.1 2980439 2981368 R PFAM: PEP-CTERM bacterial; hypothetical protein complement(2980439..2981368) Methylomonas methanica MC09 10672702 YP_004513585.1 CDS Metme_2701 NC_015572.1 2981997 2984156 R KEGG: mca:MCA0444 hypothetical protein; hypothetical protein complement(2981997..2984156) Methylomonas methanica MC09 10672703 YP_004513586.1 CDS Metme_2702 NC_015572.1 2984686 2985654 D KEGG: mca:MCA1407 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; glyoxylate reductase 2984686..2985654 Methylomonas methanica MC09 10672704 YP_004513587.1 CDS Metme_2703 NC_015572.1 2985781 2986626 R PFAM: PEP-CTERM bacterial; hypothetical protein complement(2985781..2986626) Methylomonas methanica MC09 10672705 YP_004513588.1 CDS Metme_2704 NC_015572.1 2986911 2987624 R PFAM: PEP-CTERM bacterial; hypothetical protein complement(2986911..2987624) Methylomonas methanica MC09 10672706 YP_004513589.1 CDS Metme_2705 NC_015572.1 2987715 2989976 R PFAM: Di-haem cytochrome c peroxidase; KEGG: mca:MCA2590 cytochrome c peroxidase; Di-heme cytochrome c peroxidase complement(2987715..2989976) Methylomonas methanica MC09 10672707 YP_004513590.1 CDS Metme_2706 NC_015572.1 2990363 2991955 R PFAM: Sulfotransferase; KEGG: pla:Plav_1288 sulfotransferase; sulfotransferase complement(2990363..2991955) Methylomonas methanica MC09 10672708 YP_004513591.1 CDS Metme_2707 NC_015572.1 2992203 2994977 R KEGG: nhl:Nhal_2591 hypothetical protein; hypothetical protein complement(2992203..2994977) Methylomonas methanica MC09 10672709 YP_004513592.1 CDS Metme_2708 NC_015572.1 2995057 2995269 R KEGG: nhl:Nhal_2590 arginine decarboxylase; arginine decarboxylase complement(2995057..2995269) Methylomonas methanica MC09 10672710 YP_004513593.1 CDS Metme_2709 NC_015572.1 2995347 2995850 R PFAM: Redoxin; KEGG: noc:Noc_1223 hypothetical protein; redoxin domain-containing protein complement(2995347..2995850) Methylomonas methanica MC09 10672711 YP_004513594.1 CDS Metme_2710 NC_015572.1 2996198 2996650 R KEGG: nwa:Nwat_1109 hypothetical protein; hypothetical protein complement(2996198..2996650) Methylomonas methanica MC09 10672712 YP_004513595.1 CDS Metme_2711 NC_015572.1 2996722 2997468 R manually curated; KEGG: noc:Noc_1221 hypothetical protein; hypothetical protein complement(2996722..2997468) Methylomonas methanica MC09 10672713 YP_004513596.1 CDS Metme_2712 NC_015572.1 2997548 2998252 R PFAM: PEP-CTERM bacterial; hypothetical protein complement(2997548..2998252) Methylomonas methanica MC09 10672714 YP_004513597.1 CDS Metme_2713 NC_015572.1 2998736 2999644 D KEGG: nhl:Nhal_2592 ApbE family lipoprotein; manually curated; PFAM: ApbE-like lipoprotein; ApbE family lipoprotein 2998736..2999644 Methylomonas methanica MC09 10672715 YP_004513598.1 CDS Metme_2714 NC_015572.1 2999718 3000695 R TIGRFAM: Malate dehydrogenase, NAD/NADP; HAMAP: Malate dehydrogenase; KEGG: tra:Trad_2990 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase complement(2999718..3000695) Methylomonas methanica MC09 10672716 YP_004513599.1 CDS Metme_2715 NC_015572.1 3000895 3001752 D KEGG: mca:MCA0508 methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase; PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; methylenetetrahydrofolate dehydrogenase 3000895..3001752 Methylomonas methanica MC09 10672717 YP_004513600.1 CDS Metme_2716 NC_015572.1 3001774 3003141 D KEGG: sit:TM1040_3471 hydroxypyruvate reductase; PFAM: MOFRL; glycerate kinase 3001774..3003141 Methylomonas methanica MC09 10672718 YP_004513601.1 CDS Metme_2717 NC_015572.1 3003161 3004420 D KEGG: hch:HCH_03860 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase 3003161..3004420 Methylomonas methanica MC09 10672719 YP_004513602.1 CDS Metme_2718 NC_015572.1 3005000 3006835 D PFAM: Cytochrome c, class I; KEGG: hch:HCH_04215 hypothetical protein; cytochrome c class I 3005000..3006835 Methylomonas methanica MC09 10672720 YP_004513603.1 CDS Metme_2719 NC_015572.1 3006939 3007316 R KEGG: mfa:Mfla_0012 hypothetical protein; hypothetical protein complement(3006939..3007316) Methylomonas methanica MC09 10672721 YP_004513604.1 CDS Metme_2720 NC_015572.1 3007344 3008129 R PFAM: Dienelactone hydrolase; KEGG: gsu:GSU2536 dienelactone hydrolase; dienelactone hydrolase complement(3007344..3008129) Methylomonas methanica MC09 10672722 YP_004513605.1 CDS Metme_2721 NC_015572.1 3008143 3008319 R hypothetical protein complement(3008143..3008319) Methylomonas methanica MC09 10672723 YP_004513606.1 CDS Metme_2723 NC_015572.1 3008929 3009462 D PFAM: Flavin reductase-like, FMN-binding; KEGG: msl:Msil_3722 flavin reductase domain protein FMN-binding; flavin reductase domain-containing FMN-binding protein 3008929..3009462 Methylomonas methanica MC09 10672725 YP_004513607.1 CDS Metme_2724 NC_015572.1 3009924 3010766 D TIGRFAM: HAD-superfamily hydrolase, superfamily IIB, YedP; HAD-superfamily hydrolase, subfamily IIB; KEGG: pin:Ping_2602 mannosyl-3-phosphoglycerate phosphatase; PFAM: HAD superfamily hydrolase-like, type 3; mannosyl-3-phosphoglycerate phosphatase 3009924..3010766 Methylomonas methanica MC09 10672726 YP_004513608.1 CDS Metme_2725 NC_015572.1 3010780 3012003 D KEGG: amc:MADE_02160 cell wall biogenesis glycosyltransferase; cell wall biosynthesis glycosyltransferase 3010780..3012003 Methylomonas methanica MC09 10672727 YP_004513609.1 CDS Metme_2726 NC_015572.1 3012015 3013793 D PFAM: Glycosyl hydrolase, family 13, catalytic region; KEGG: sfr:Sfri_2846 alpha amylase, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; sucrose phosphorylase 3012015..3013793 Methylomonas methanica MC09 10672728 YP_004513610.1 CDS Metme_2727 NC_015572.1 3013817 3014359 R KEGG: ppg:PputGB1_1816 anti-FecI sigma factor, FecR; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3013817..3014359) Methylomonas methanica MC09 10672729 YP_004513611.1 CDS Metme_2728 NC_015572.1 3014682 3017114 R KEGG: neu:NE2165 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; TonB-dependent siderophore receptor complement(3014682..3017114) Methylomonas methanica MC09 10672730 YP_004513612.1 CDS Metme_2729 NC_015572.1 3017634 3018599 R PFAM: FecR protein; KEGG: mms:mma_1214 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR complement(3017634..3018599) Methylomonas methanica MC09 10672731 YP_004513613.1 CDS Metme_2730 NC_015572.1 3018606 3019115 R KEGG: psa:PST_4176 ECF subfamily RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3018606..3019115) Methylomonas methanica MC09 10672732 YP_004513614.1 CDS Metme_2731 NC_015572.1 3019520 3020020 R KEGG: ppf:Pput_3545 anti-FecI sigma factor, FecR; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3019520..3020020) Methylomonas methanica MC09 10672733 YP_004513615.1 CDS Metme_2733 NC_015572.1 3023032 3023337 D hypothetical protein 3023032..3023337 Methylomonas methanica MC09 10672735 YP_004513616.1 CDS Metme_2734 NC_015572.1 3023442 3023726 R manually curated; TIGRFAM: Addiction module toxin, RelE/StbE; KEGG: tin:Tint_3241 addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin complement(3023442..3023726) Methylomonas methanica MC09 10672736 YP_004513617.1 CDS Metme_2735 NC_015572.1 3023723 3024004 R KEGG: antitoxin of a toxin/antitoxin system; antitoxin of a toxin/antitoxin system complement(3023723..3024004) Methylomonas methanica MC09 10672737 YP_004513618.1 CDS Metme_2736 NC_015572.1 3024063 3025028 R PFAM: FecR protein; KEGG: mms:mma_1234 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR complement(3024063..3025028) Methylomonas methanica MC09 10672738 YP_004513619.1 CDS Metme_2737 NC_015572.1 3025022 3025525 R KEGG: psa:PST_4176 ECF subfamily RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3025022..3025525) Methylomonas methanica MC09 10672739 YP_004513620.1 CDS Metme_2738 NC_015572.1 3025876 3026766 R KEGG: ter:Tery_4268 2,3-dimethylmalate lyase; PFAM: Isocitrate lyase/phosphorylmutase; carboxyvinyl-carboxyphosphonate phosphorylmutase complement(3025876..3026766) Methylomonas methanica MC09 10672740 YP_004513621.1 CDS Metme_2739 NC_015572.1 3026786 3028003 R PFAM: Major facilitator superfamily MFS-1; KEGG: mei:Msip34_2767 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(3026786..3028003) Methylomonas methanica MC09 10672741 YP_004513622.1 CDS Metme_2740 NC_015572.1 3028154 3028732 R hypothetical protein complement(3028154..3028732) Methylomonas methanica MC09 10672742 YP_004513623.1 CDS Metme_2741 NC_015572.1 3029136 3030107 R hypothetical protein complement(3029136..3030107) Methylomonas methanica MC09 10672743 YP_004513624.1 CDS Metme_2742 NC_015572.1 3030537 3030692 R hypothetical protein complement(3030537..3030692) Methylomonas methanica MC09 10672744 YP_004513625.1 CDS Metme_2743 NC_015572.1 3030717 3031154 D manually curated; KEGG: spl:Spea_2925 hypothetical protein; hypothetical protein 3030717..3031154 Methylomonas methanica MC09 10672745 YP_004513626.1 CDS Metme_2745 NC_015572.1 3031641 3032366 R PFAM: YkuD domain; KEGG: kko:Kkor_2536 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(3031641..3032366) Methylomonas methanica MC09 10672747 YP_004513627.1 CDS Metme_2746 NC_015572.1 3032411 3032806 R KEGG: ctt:CtCNB1_0936 hypothetical protein; hypothetical protein complement(3032411..3032806) Methylomonas methanica MC09 10672748 YP_004513628.1 CDS Metme_2747 NC_015572.1 3032984 3033475 R KEGG: ttu:TERTU_1544 hypothetical protein; hypothetical protein complement(3032984..3033475) Methylomonas methanica MC09 10672749 YP_004513629.1 CDS Metme_2748 NC_015572.1 3033751 3034356 R PFAM: Protein of unknown function DUF1287; KEGG: kko:Kkor_0107 protein of unknown function DUF1287; hypothetical protein complement(3033751..3034356) Methylomonas methanica MC09 10672750 YP_004513630.1 CDS Metme_2749 NC_015572.1 3034578 3034847 D KEGG: lbf:LBF_2417 hypothetical protein; hypothetical protein 3034578..3034847 Methylomonas methanica MC09 10672751 YP_004513631.1 CDS Metme_2750 NC_015572.1 3034958 3036601 R TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: mca:MCA0753 phosphoglyceromutase; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; phosphoglycerate mutase complement(3034958..3036601) Methylomonas methanica MC09 10672752 YP_004513632.1 CDS Metme_2751 NC_015572.1 3036791 3039883 R PFAM: Acriflavin resistance protein; KEGG: mca:MCA0079 AcrB/AcrD/AcrF family protein; acriflavin resistance protein complement(3036791..3039883) Methylomonas methanica MC09 10672753 YP_004513633.1 CDS Metme_2752 NC_015572.1 3040042 3041637 D KEGG: mfa:Mfla_1260 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; Sel1-like; hypothetical protein 3040042..3041637 Methylomonas methanica MC09 10672754 YP_004513634.1 CDS Metme_2753 NC_015572.1 3041902 3043197 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: gca:Galf_2779 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase 3041902..3043197 Methylomonas methanica MC09 10672755 YP_004513635.1 CDS Metme_2754 NC_015572.1 3043283 3044509 D KEGG: azo:azo2288 HD-domain-containing protein; TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; metal dependent phosphohydrolase 3043283..3044509 Methylomonas methanica MC09 10672756 YP_004513636.1 CDS Metme_2755 NC_015572.1 3044589 3045983 D TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: mca:MCA1735 replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase 3044589..3045983 Methylomonas methanica MC09 10672757 YP_004513637.1 CDS Metme_2756 NC_015572.1 3045980 3047062 D PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: mca:MCA1734 alanine racemase; alanine racemase 3045980..3047062 Methylomonas methanica MC09 10672758 YP_004513638.1 CDS Metme_2757 NC_015572.1 3047192 3047800 D KEGG: ppd:Ppro_3210 hypothetical protein; hypothetical protein 3047192..3047800 Methylomonas methanica MC09 10672759 YP_004513639.1 CDS Metme_2758 NC_015572.1 3047931 3048434 D hypothetical protein 3047931..3048434 Methylomonas methanica MC09 10672760 YP_004513640.1 CDS Metme_2759 NC_015572.1 3048660 3050030 D KEGG: epy:EpC_06680 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core; DNA repair protein RadA 3048660..3050030 Methylomonas methanica MC09 10672761 YP_004513641.1 CDS Metme_2760 NC_015572.1 3050041 3051711 R PFAM: Spermine synthase; KEGG: nwa:Nwat_1114 hypothetical protein; spermine synthase complement(3050041..3051711) Methylomonas methanica MC09 10672762 YP_004513642.1 CDS Metme_2761 NC_015572.1 3051763 3052575 R KEGG: net:Neut_1920 PEP motif-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(3051763..3052575) Methylomonas methanica MC09 10672763 YP_004513643.1 CDS Metme_2762 NC_015572.1 3053155 3053928 R PFAM: PEP-CTERM bacterial; KEGG: mfa:Mfla_2195 hypothetical protein; hypothetical protein complement(3053155..3053928) Methylomonas methanica MC09 10672764 YP_004513644.1 CDS Metme_2763 NC_015572.1 3054521 3054814 D hypothetical protein 3054521..3054814 Methylomonas methanica MC09 10672765 YP_004513645.1 CDS Metme_2764 NC_015572.1 3054848 3055225 R PFAM: Type IV pilus assembly PilZ; KEGG: pst:PSPTO_4639 hypothetical protein; type IV pilus assembly PilZ complement(3054848..3055225) Methylomonas methanica MC09 10672766 YP_004513646.1 CDS Metme_2765 NC_015572.1 3055232 3055879 R PFAM: Forkhead-associated; KEGG: slt:Slit_0532 FHA domain containing protein; forkhead-associated protein complement(3055232..3055879) Methylomonas methanica MC09 10672767 YP_004513647.1 CDS Metme_2766 NC_015572.1 3056095 3058227 D TIGRFAM: Phosphate acetyltransferase; KEGG: sfu:Sfum_1472 phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; DRTGG; phosphate acetyltransferase 3056095..3058227 Methylomonas methanica MC09 10672768 YP_004513648.1 CDS Metme_2767 NC_015572.1 3058224 3058751 D KEGG: mfa:Mfla_0366 hypothetical protein; hypothetical protein 3058224..3058751 Methylomonas methanica MC09 10672769 YP_004513649.1 CDS Metme_2768 NC_015572.1 3058800 3059993 D PFAM: Acetate/butyrate kinase; TIGRFAM: Acetate kinase; HAMAP: Acetate kinase; KEGG: nhl:Nhal_3094 acetate kinase; acetate kinase 3058800..3059993 Methylomonas methanica MC09 10672770 YP_004513650.1 CDS Metme_2769 NC_015572.1 3060024 3060890 D PFAM: Metal-dependent hydrolase HDOD; KEGG: pfs:PFLU5794 hypothetical protein; signal transduction protein 3060024..3060890 Methylomonas methanica MC09 10672771 YP_004513651.1 CDS Metme_2770 NC_015572.1 3060981 3061223 D hypothetical protein 3060981..3061223 Methylomonas methanica MC09 10672772 YP_004513652.1 CDS Metme_2771 NC_015572.1 3061228 3061725 R hypothetical protein complement(3061228..3061725) Methylomonas methanica MC09 10672773 YP_004513653.1 CDS Metme_2772 NC_015572.1 3061847 3063220 D KEGG: mca:MCA2977 sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 3061847..3063220 Methylomonas methanica MC09 10672774 YP_004513654.1 CDS Metme_2773 NC_015572.1 3063198 3063746 D KEGG: mca:MCA2976 DNA binding response regulator; PFAM: Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; Fis family transcriptional regulator 3063198..3063746 Methylomonas methanica MC09 10672775 YP_004513655.1 CDS Metme_2774 NC_015572.1 3063774 3064154 D PFAM: VanZ like protein; KEGG: dat:HRM2_37650 hypothetical protein; VanZ family protein 3063774..3064154 Methylomonas methanica MC09 10672776 YP_004513656.1 CDS Metme_2775 NC_015572.1 3064322 3065335 R PFAM: Dihydroorotate dehydrogenase, class 1/ 2; KEGG: tbd:Tbd_2467 dihydroorotate dehydrogenase 2; dihydroorotate oxidase complement(3064322..3065335) Methylomonas methanica MC09 10672777 YP_004513657.1 CDS Metme_2776 NC_015572.1 3065328 3068966 R TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: alv:Alvin_0264 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; pyruvate ferredoxin/flavodoxin oxidoreductase complement(3065328..3068966) Methylomonas methanica MC09 10672778 YP_004513658.1 CDS Metme_2777 NC_015572.1 3069524 3070219 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mca:MCA2459 CsgA protein; short-chain dehydrogenase/reductase SDR complement(3069524..3070219) Methylomonas methanica MC09 10672779 YP_004513659.1 CDS Metme_2778 NC_015572.1 3070235 3070390 R hypothetical protein complement(3070235..3070390) Methylomonas methanica MC09 10672780 YP_004513660.1 CDS Metme_2779 NC_015572.1 3070749 3071435 R KEGG: pfl:PFL_2484 hypothetical protein; hypothetical protein complement(3070749..3071435) Methylomonas methanica MC09 10672781 YP_004513661.1 CDS Metme_2780 NC_015572.1 3071587 3071859 D hypothetical protein 3071587..3071859 Methylomonas methanica MC09 10672782 YP_004513662.1 CDS Metme_2781 NC_015572.1 3072214 3072393 D hypothetical protein 3072214..3072393 Methylomonas methanica MC09 10672783 YP_004513663.1 CDS Metme_2782 NC_015572.1 3072390 3073064 R KEGG: tgr:Tgr7_1360 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SMART: HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator complement(3072390..3073064) Methylomonas methanica MC09 10672784 YP_004513664.1 CDS Metme_2783 NC_015572.1 3073092 3073487 R KEGG: hch:HCH_04984 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein with CBS domains complement(3073092..3073487) Methylomonas methanica MC09 10672785 YP_004513665.1 CDS Metme_2784 NC_015572.1 3073760 3074593 D PFAM: Metal-dependent hydrolase HDOD; KEGG: mmw:Mmwyl1_3755 signal transduction protein; signal transduction protein 3073760..3074593 Methylomonas methanica MC09 10672786 YP_004513666.1 CDS Metme_2785 NC_015572.1 3074629 3075339 R KEGG: sfr:Sfri_2495 hypothetical protein; hypothetical protein complement(3074629..3075339) Methylomonas methanica MC09 10672787 YP_004513667.1 CDS Metme_2786 NC_015572.1 3075332 3076390 R KEGG: mca:MCA1689 hypothetical protein; hypothetical protein complement(3075332..3076390) Methylomonas methanica MC09 10672788 YP_004513668.1 CDS Metme_2787 NC_015572.1 3076387 3077640 R KEGG: mca:MCA1688 hypothetical protein; hypothetical protein complement(3076387..3077640) Methylomonas methanica MC09 10672789 YP_004513669.1 CDS Metme_2788 NC_015572.1 3077672 3078577 R TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; KEGG: sth:STH1137 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase A complement(3077672..3078577) Methylomonas methanica MC09 10672790 YP_004513670.1 CDS Metme_2789 NC_015572.1 3078592 3079989 R SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: mca:MCA1467 serine protease, MucD; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; protease Do complement(3078592..3079989) Methylomonas methanica MC09 10672791 YP_004513671.1 CDS Metme_2790 NC_015572.1 3080034 3080978 R PFAM: MucB/RseB; KEGG: mca:MCA1469 sigma-E factor regulatory protein; sigma E regulatory protein MucB/RseB complement(3080034..3080978) Methylomonas methanica MC09 10672792 YP_004513672.1 CDS Metme_2791 NC_015572.1 3080987 3081490 R KEGG: alv:Alvin_1725 anti sigma-E protein RseA; hypothetical protein complement(3080987..3081490) Methylomonas methanica MC09 10672793 YP_004513673.1 CDS Metme_2792 NC_015572.1 3081501 3082091 R KEGG: mca:MCA1471 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3081501..3082091) Methylomonas methanica MC09 10672794 YP_004513674.1 CDS Metme_2793 NC_015572.1 3082229 3083863 D TIGRFAM: L-aspartate oxidase; KEGG: mca:MCA1472 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; L-aspartate oxidase 3082229..3083863 Methylomonas methanica MC09 10672795 YP_004513675.1 CDS Metme_2794 NC_015572.1 3084120 3086405 R KEGG: mca:MCA1123 general secretion pathway protein D; TIGRFAM: Type II secretion system gspD; PFAM: Type II/III secretion system; NolW-like; general secretion pathway protein D complement(3084120..3086405) Methylomonas methanica MC09 10672796 YP_004513676.1 CDS Metme_2795 NC_015572.1 3086395 3086997 R hypothetical protein complement(3086395..3086997) Methylomonas methanica MC09 10672797 YP_004513677.1 CDS Metme_2796 NC_015572.1 3086990 3087571 R PFAM: General secretion pathway protein M; KEGG: mca:MCA1122 general secretion pathway protein; General secretion pathway protein M complement(3086990..3087571) Methylomonas methanica MC09 10672798 YP_004513678.1 CDS Metme_2797 NC_015572.1 3087564 3088772 R PFAM: Fimbrial assembly; KEGG: mca:MCA1121 general secretion pathway protein L; fimbrial assembly family protein complement(3087564..3088772) Methylomonas methanica MC09 10672799 YP_004513679.1 CDS Metme_2798 NC_015572.1 3088750 3089736 R KEGG: mca:MCA1120 general secretion pathway protein K; general secretion pathway protein K complement(3088750..3089736) Methylomonas methanica MC09 10672800 YP_004513680.1 CDS Metme_2799 NC_015572.1 3089714 3090391 R KEGG: nhl:Nhal_3653 general secretion pathway protein J; general secretion pathway protein J complement(3089714..3090391) Methylomonas methanica MC09 10672801 YP_004513681.1 CDS Metme_2800 NC_015572.1 3090388 3090816 R KEGG: nhl:Nhal_0443 general secretion pathway protein H; general secretion pathway protein H complement(3090388..3090816) Methylomonas methanica MC09 10672802 YP_004513682.1 CDS Metme_2801 NC_015572.1 3090800 3091261 R TIGRFAM: General secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal; KEGG: noc:Noc_2892 general secretion pathway protein H; general secretion pathway protein H complement(3090800..3091261) Methylomonas methanica MC09 10672803 YP_004513683.1 CDS Metme_2802 NC_015572.1 3091268 3091693 R KEGG: mca:MCA1116 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; general secretion pathway protein G complement(3091268..3091693) Methylomonas methanica MC09 10672804 YP_004513684.1 CDS Metme_2803 NC_015572.1 3091707 3092924 R PFAM: Type II secretion system F domain; KEGG: mca:MCA1115 general secretion pathway protein F; type II secretion system F domain-containing protein complement(3091707..3092924) Methylomonas methanica MC09 10672805 YP_004513685.1 CDS Metme_2804 NC_015572.1 3093017 3093979 R TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: mca:MCA0314 HflC protein, SMART: Band 7 protein; HflC protein complement(3093017..3093979) Methylomonas methanica MC09 10672806 YP_004513686.1 CDS Metme_2805 NC_015572.1 3093976 3094953 R TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: mca:MCA0313 HflK protein, SMART: Band 7 protein; HflK protein complement(3093976..3094953) Methylomonas methanica MC09 10672807 YP_004513687.1 CDS Metme_2806 NC_015572.1 3095116 3095592 R KEGG: pag:PLES_44811 peptidyl-prolyl cis-trans isomerase SlyD; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; peptidyl-prolyl isomerase complement(3095116..3095592) Methylomonas methanica MC09 10672808 YP_004513688.1 CDS Metme_2807 NC_015572.1 3095646 3095822 D PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; KEGG: transcription elongation factor GreB; transcription elongation factor GreA/GreB domain-containing protein 3095646..3095822 Methylomonas methanica MC09 10672809 YP_004513689.1 CDS Metme_2808 NC_015572.1 3096783 3098147 D KEGG: eba:p1B277 transposase; transposase 3096783..3098147 Methylomonas methanica MC09 10672810 YP_004513690.1 CDS Metme_2809 NC_015572.1 3098388 3099449 R hypothetical protein complement(3098388..3099449) Methylomonas methanica MC09 10672811 YP_004513691.1 CDS Metme_2810 NC_015572.1 3099883 3100662 R KEGG: gpb:HDN1F_07110 hypothetical protein; hypothetical protein complement(3099883..3100662) Methylomonas methanica MC09 10672812 YP_004513692.1 CDS Metme_2811 NC_015572.1 3100716 3101201 R KEGG: gca:Galf_0729 hypothetical protein; hypothetical protein complement(3100716..3101201) Methylomonas methanica MC09 10672813 YP_004513693.1 CDS Metme_2812 NC_015572.1 3101201 3101680 R KEGG: nhl:Nhal_3522 hypothetical protein; hypothetical protein complement(3101201..3101680) Methylomonas methanica MC09 10672814 YP_004513694.1 CDS Metme_2813 NC_015572.1 3101677 3101973 R KEGG: nhl:Nhal_3521 hypothetical protein; hypothetical protein complement(3101677..3101973) Methylomonas methanica MC09 10672815 YP_004513695.1 CDS Metme_2814 NC_015572.1 3102243 3104243 R KEGG: psl:Psta_3425 hypothetical protein; hypothetical protein complement(3102243..3104243) Methylomonas methanica MC09 10672816 YP_004513696.1 CDS Metme_2815 NC_015572.1 3104253 3108695 R KEGG: gpb:HDN1F_07090 hypothetical protein; hypothetical protein complement(3104253..3108695) Methylomonas methanica MC09 10672817 YP_004513697.1 CDS Metme_2816 NC_015572.1 3108717 3111491 R KEGG: gpb:HDN1F_07070 superfamily II DNA/RNA helicases, SNF2 family; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; helicase complement(3108717..3111491) Methylomonas methanica MC09 10672818 YP_004513698.1 CDS Metme_2818 NC_015572.1 3116765 3118276 D PFAM: Transposase, IS4-like; KEGG: mac:MA1045 transposase; transposase IS4 family protein 3116765..3118276 Methylomonas methanica MC09 10672820 YP_004513699.1 CDS Metme_2819 NC_015572.1 3118801 3119283 R TIGRFAM: Transcription elongation factor GreB, prokaryotic; HAMAP: Transcription elongation factor greA; KEGG: enc:ECL_04771 transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreB complement(3118801..3119283) Methylomonas methanica MC09 10672821 YP_004513700.1 CDS Metme_2820 NC_015572.1 3119288 3119896 R KEGG: spc:Sputcn32_3808 hypothetical protein; hypothetical protein complement(3119288..3119896) Methylomonas methanica MC09 10672822 YP_004513701.1 CDS Metme_2821 NC_015572.1 3119893 3122634 R PFAM: Integrase, catalytic core, phage; KEGG: spc:Sputcn32_3807 phage integrase; integrase complement(3119893..3122634) Methylomonas methanica MC09 10672823 YP_004513702.1 CDS Metme_2822 NC_015572.1 3122631 3123947 R PFAM: Integrase, catalytic core, phage; KEGG: psm:PSM_A2937 phage integrase; integrase complement(3122631..3123947) Methylomonas methanica MC09 10672824 YP_004513703.1 CDS Metme_2823 NC_015572.1 3124044 3124382 D PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; KEGG: hch:HCH_00585 transcription elongation factor GreB; GreA/GreB family elongation factor 3124044..3124382 Methylomonas methanica MC09 10672825 YP_004513704.1 CDS Metme_2824 NC_015572.1 3124382 3124552 D KEGG: mca:MCA0175 hypothetical protein; hypothetical protein 3124382..3124552 Methylomonas methanica MC09 10672826 YP_004513705.1 CDS Metme_2825 NC_015572.1 3124560 3124982 D PFAM: AIG2-like; KEGG: rpb:RPB_4134 hypothetical protein; AIG2 family protein 3124560..3124982 Methylomonas methanica MC09 10672827 YP_004513706.1 CDS Metme_2826 NC_015572.1 3125005 3127671 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: mmb:Mmol_0141 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3125005..3127671 Methylomonas methanica MC09 10672828 YP_004513707.1 CDS Metme_2827 NC_015572.1 3127637 3128074 D KEGG: gbm:Gbem_4009 hemerythrin family protein; TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Haemerythrin/HHE cation-binding motif; hemerythrin-like metal-binding protein 3127637..3128074 Methylomonas methanica MC09 10672829 YP_004513708.1 CDS Metme_2828 NC_015572.1 3128071 3128511 D TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: kko:Kkor_2277 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 3128071..3128511 Methylomonas methanica MC09 10672830 YP_004513709.1 CDS Metme_2829 NC_015572.1 3128492 3128737 R KEGG: amr:AM1_0120 hypothetical protein; hypothetical protein complement(3128492..3128737) Methylomonas methanica MC09 10672831 YP_004513710.1 CDS Metme_2830 NC_015572.1 3128750 3132676 R PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria; HAMAP: Phosphoribosylformylglycinamidine synthase; KEGG: mca:MCA0673 phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase complement(3128750..3132676) Methylomonas methanica MC09 10672832 YP_004513711.1 CDS Metme_2831 NC_015572.1 3132765 3133490 R KEGG: mca:MCA0672 lipoprotein; hypothetical protein complement(3132765..3133490) Methylomonas methanica MC09 10672833 YP_004513712.1 CDS Metme_2832 NC_015572.1 3133534 3134409 R TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: mca:MCA0671 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; Dihydrodipicolinate synthase complement(3133534..3134409) Methylomonas methanica MC09 10672834 YP_004513713.1 CDS Metme_2833 NC_015572.1 3134482 3134937 R KEGG: amr:AM1_1179 YaiI/YqxD family protein; HAMAP: Protein of unknown function DUF188; PFAM: Protein of unknown function DUF188; hypothetical protein complement(3134482..3134937) Methylomonas methanica MC09 10672835 YP_004513714.1 CDS Metme_2834 NC_015572.1 3134937 3135635 R KEGG: hor:Hore_18810 phosphoesterase PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; phosphoesterase PA-phosphatase-like protein complement(3134937..3135635) Methylomonas methanica MC09 10672836 YP_004513715.1 CDS Metme_2835 NC_015572.1 3135616 3137157 R KEGG: tye:THEYE_A0589 hypothetical protein; hypothetical protein complement(3135616..3137157) Methylomonas methanica MC09 10672837 YP_004513716.1 CDS Metme_2836 NC_015572.1 3137166 3138911 R KEGG: pap:PSPA7_1395 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; single-stranded-DNA-specific exonuclease RecJ complement(3137166..3138911) Methylomonas methanica MC09 10672838 YP_004513717.1 CDS Metme_2837 NC_015572.1 3138966 3140060 R KEGG: gpb:HDN1F_22470 threonine synthase; TIGRFAM: Threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase complement(3138966..3140060) Methylomonas methanica MC09 10672839 YP_004513718.1 CDS Metme_2838 NC_015572.1 3140064 3141374 R KEGG: mca:MCA0597 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; Homoserine dehydrogenase complement(3140064..3141374) Methylomonas methanica MC09 10672840 YP_004513719.1 CDS Metme_2839 NC_015572.1 3141411 3142595 R KEGG: tgr:Tgr7_1438 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; LL-diaminopimelate aminotransferase complement(3141411..3142595) Methylomonas methanica MC09 10672841 YP_004513720.1 CDS Metme_2840 NC_015572.1 3142741 3144033 R KEGG: mca:MCA1978 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase; adenylosuccinate synthetase complement(3142741..3144033) Methylomonas methanica MC09 10672842 YP_004513721.1 CDS Metme_2841 NC_015572.1 3144060 3145256 R TIGRFAM: Histidyl-tRNA synthetase, class IIa, HAMAP: ATP phosphoribosyltransferase regulatory subunit; KEGG: aeh:Mlg_0577 ATP phosphoribosyltransferase regulatory subunit; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; ATP phosphoribosyltransferase complement(3144060..3145256) Methylomonas methanica MC09 10672843 YP_004513722.1 CDS Metme_2842 NC_015572.1 3145328 3146182 R TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: mca:MCA1980 HflC protein; SMART: Band 7 protein; HflC protein complement(3145328..3146182) Methylomonas methanica MC09 10672844 YP_004513723.1 CDS Metme_2843 NC_015572.1 3146184 3147371 R TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: mca:MCA1981 HflK protein; SMART: Band 7 protein; HflK protein complement(3146184..3147371) Methylomonas methanica MC09 10672845 YP_004513724.1 CDS Metme_2844 NC_015572.1 3147522 3148787 R KEGG: cja:CJA_3078 hypothetical protein; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein HflX complement(3147522..3148787) Methylomonas methanica MC09 10672846 YP_004513725.1 CDS Metme_2845 NC_015572.1 3148799 3149041 R TIGRFAM: Host factor Hfq; HAMAP: Protein hfq; KEGG: mca:MCA1983 hfq protein; PFAM: Like-Sm ribonucleoprotein, core; protein hfq complement(3148799..3149041) Methylomonas methanica MC09 10672847 YP_004513726.1 CDS Metme_2846 NC_015572.1 3149324 3150988 R TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: alv:Alvin_0632 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; ChvD family ATP-binding protein complement(3149324..3150988) Methylomonas methanica MC09 10672848 YP_004513727.1 CDS Metme_2847 NC_015572.1 3151454 3151912 D hypothetical protein 3151454..3151912 Methylomonas methanica MC09 10672849 YP_004513728.1 CDS Metme_2848 NC_015572.1 3151972 3152697 D PFAM: Deoxyribonuclease, TatD-related; KEGG: TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 3151972..3152697 Methylomonas methanica MC09 10672850 YP_004513729.1 CDS Metme_2849 NC_015572.1 3152690 3153448 D PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: lby:Lbys_1163 uba/ThiF-type nad/fad binding protein; UBA/THIF-type NAD/FAD binding protein 3152690..3153448 Methylomonas methanica MC09 10672851 YP_004513730.1 CDS Metme_2850 NC_015572.1 3153441 3153875 D hypothetical protein 3153441..3153875 Methylomonas methanica MC09 10672852 YP_004513731.1 CDS Metme_2851 NC_015572.1 3154051 3154872 D KEGG: bvi:Bcep1808_6033 ModE family transcriptional regulator; TIGRFAM: Molybdenum-pterin binding; PFAM: HTH transcriptional regulator, LysR; Transport-associated OB, type 1; ModE family transcriptional regulator 3154051..3154872 Methylomonas methanica MC09 10672853 YP_004513732.1 CDS Metme_2852 NC_015572.1 3154911 3155405 D PFAM: Protein of unknown function, inner membrane,YgjV; KEGG: sus:Acid_3678 hypothetical protein; hypothetical protein 3154911..3155405 Methylomonas methanica MC09 10672854 YP_004513733.1 CDS Metme_2853 NC_015572.1 3155678 3155896 D KEGG: sse:Ssed_2614 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 3155678..3155896 Methylomonas methanica MC09 10672855 YP_004513734.1 CDS Metme_2854 NC_015572.1 3156195 3156557 D PFAM: Invasion gene expression up-regulator, SirB; KEGG: aha:AHA_0341 SirB family protein; Invasion gene expression up-regulator SirB 3156195..3156557 Methylomonas methanica MC09 10672856 YP_004513735.1 CDS Metme_2855 NC_015572.1 3156972 3157265 D KEGG: rme:Rmet_1823 heat shock protein DnaJ-like protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 3156972..3157265 Methylomonas methanica MC09 10672857 YP_004513736.1 CDS Metme_2856 NC_015572.1 3157402 3157620 R KEGG: azo:azo2922 hypothetical protein; TIGRFAM: bacteriocin propeptide, TIGR03798 family; PFAM: Protein of unknown function, nitrogen fixation; bacteriocin propeptide complement(3157402..3157620) Methylomonas methanica MC09 10672858 YP_004513737.1 CDS Metme_2857 NC_015572.1 3157904 3159604 R PFAM: ATPase, AAA-type, core; KEGG: avn:Avin_18070 ATPase, AAA superfamily; ATPase AAA complement(3157904..3159604) Methylomonas methanica MC09 10672859 YP_004513738.1 CDS Metme_2858 NC_015572.1 3159609 3160970 R PFAM: Cysteine-rich region, CCG; KEGG: avn:Avin_03450 hypothetical protein; hypothetical protein complement(3159609..3160970) Methylomonas methanica MC09 10672860 YP_004513739.1 CDS Metme_2859 NC_015572.1 3161202 3161498 D KEGG: avn:Avin_40900 hypothetical protein; hypothetical protein 3161202..3161498 Methylomonas methanica MC09 10672861 YP_004513740.1 CDS Metme_2860 NC_015572.1 3161506 3161985 D PFAM: GCN5-related N-acetyltransferase; KEGG: avn:Avin_46600 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3161506..3161985 Methylomonas methanica MC09 10672862 YP_004513741.1 CDS Metme_2861 NC_015572.1 3162236 3162745 D KEGG: neu:NE0554 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 3162236..3162745 Methylomonas methanica MC09 10672863 YP_004513742.1 CDS Metme_2862 NC_015572.1 3162812 3163786 D PFAM: FecR protein; KEGG: rsk:RSKD131_4269 FecR; anti-FecI sigma factor FecR 3162812..3163786 Methylomonas methanica MC09 10672864 YP_004513743.1 CDS Metme_2863 NC_015572.1 3163875 3166289 D KEGG: neu:NE0546 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3163875..3166289 Methylomonas methanica MC09 10672865 YP_004513744.1 CDS Metme_2865 NC_015572.1 3167835 3168221 R PFAM: PilT protein, N-terminal; KEGG: pph:Ppha_0188 PilT protein domain protein; twitching motility protein PilT complement(3167835..3168221) Methylomonas methanica MC09 10672867 YP_004513745.1 CDS Metme_2866 NC_015572.1 3168211 3168471 R hypothetical protein complement(3168211..3168471) Methylomonas methanica MC09 10672868 YP_004513746.1 CDS Metme_2867 NC_015572.1 3168802 3169662 D KEGG: mca:MCA0441 TonB domain-containing protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein 3168802..3169662 Methylomonas methanica MC09 10672869 YP_004513747.1 CDS Metme_2868 NC_015572.1 3169677 3170345 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: mca:MCA0669 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel 3169677..3170345 Methylomonas methanica MC09 10672870 YP_004513748.1 CDS Metme_2869 NC_015572.1 3170351 3170761 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_1558 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3170351..3170761 Methylomonas methanica MC09 10672871 YP_004513749.1 CDS Metme_2870 NC_015572.1 3170920 3171453 D KEGG: nde:NIDE2175 RNA polymerase sigma factor FecI (sigma-19); TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 3170920..3171453 Methylomonas methanica MC09 10672872 YP_004513750.1 CDS Metme_2871 NC_015572.1 3171558 3172529 D PFAM: FecR protein; KEGG: nde:NIDE2174 ferric citrate sensor FecR; anti-FecI sigma factor FecR 3171558..3172529 Methylomonas methanica MC09 10672873 YP_004513751.1 CDS Metme_2872 NC_015572.1 3172735 3175215 D KEGG: neu:NE0546 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3172735..3175215 Methylomonas methanica MC09 10672874 YP_004513752.1 CDS Metme_2873 NC_015572.1 3175422 3176708 D PFAM: PepSY-associated TM helix; KEGG: net:Neut_1727 PepSY-associated TM helix domain-containing protein; PepSY-associated TM helix domain-containing protein 3175422..3176708 Methylomonas methanica MC09 10672875 YP_004513753.1 CDS Metme_2874 NC_015572.1 3176705 3177058 D KEGG: neu:NE0136 hypothetical protein; hypothetical protein 3176705..3177058 Methylomonas methanica MC09 10672876 YP_004513754.1 CDS Metme_2875 NC_015572.1 3177316 3178125 D KEGG: mfa:Mfla_1560 TonB-like protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein 3177316..3178125 Methylomonas methanica MC09 10672877 YP_004513755.1 CDS Metme_2876 NC_015572.1 3178325 3178831 D KEGG: avn:Avin_03870 RNA polymerase sigma factor, FecI family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 3178325..3178831 Methylomonas methanica MC09 10672878 YP_004513756.1 CDS Metme_2877 NC_015572.1 3178919 3179932 D PFAM: FecR protein; KEGG: pen:PSEEN0275 FecR-like transmembrane sensor; anti-FecI sigma factor FecR 3178919..3179932 Methylomonas methanica MC09 10672879 YP_004513757.1 CDS Metme_2878 NC_015572.1 3180093 3182471 D KEGG: neu:NE0549 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3180093..3182471 Methylomonas methanica MC09 10672880 YP_004513758.1 CDS Metme_2879 NC_015572.1 3182834 3183421 R PFAM: Protein of unknown function DUF820; KEGG: ana:all1618 hypothetical protein; hypothetical protein complement(3182834..3183421) Methylomonas methanica MC09 10672881 YP_004513759.1 CDS Metme_2880 NC_015572.1 3183773 3184288 D KEGG: pap:PSPA7_0227 ECF subfamily RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 3183773..3184288 Methylomonas methanica MC09 10672882 YP_004513760.1 CDS Metme_2881 NC_015572.1 3184349 3185350 D PFAM: FecR protein; KEGG: avn:Avin_03880 anti-sigma factor protein, FecR family; anti-FecI sigma factor FecR 3184349..3185350 Methylomonas methanica MC09 10672883 YP_004513761.1 CDS Metme_2882 NC_015572.1 3185367 3185816 D KEGG: cps:CPS_1489 hypothetical protein; hypothetical protein 3185367..3185816 Methylomonas methanica MC09 10672884 YP_004513762.1 CDS Metme_2883 NC_015572.1 3185989 3188445 D KEGG: neu:NE0556 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3185989..3188445 Methylomonas methanica MC09 10672885 YP_004513763.1 CDS Metme_2884 NC_015572.1 3188753 3189997 D PFAM: PepSY-associated TM helix; KEGG: nde:NIDE0645 hypothetical protein; PepSY-associated TM helix domain-containing protein 3188753..3189997 Methylomonas methanica MC09 10672886 YP_004513764.1 CDS Metme_2885 NC_015572.1 3190414 3190920 D KEGG: nde:NIDE2175 RNA polymerase sigma factor FecI (sigma-19); TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 3190414..3190920 Methylomonas methanica MC09 10672887 YP_004513765.1 CDS Metme_2886 NC_015572.1 3190991 3191995 D PFAM: FecR protein; KEGG: avn:Avin_03880 anti-sigma factor protein, FecR family; anti-FecI sigma factor FecR 3190991..3191995 Methylomonas methanica MC09 10672888 YP_004513766.1 CDS Metme_2887 NC_015572.1 3192277 3192774 D KEGG: xau:Xaut_2777 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 3192277..3192774 Methylomonas methanica MC09 10672889 YP_004513767.1 CDS Metme_2888 NC_015572.1 3192844 3193845 D PFAM: FecR protein; KEGG: avn:Avin_03880 anti-sigma factor protein, FecR family; anti-FecI sigma factor FecR 3192844..3193845 Methylomonas methanica MC09 10672890 YP_004513768.1 CDS Metme_2889 NC_015572.1 3193962 3196361 D KEGG: noc:Noc_0321 ferrichrome iron receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3193962..3196361 Methylomonas methanica MC09 10672891 YP_004513769.1 CDS Metme_2890 NC_015572.1 3196429 3197691 D PFAM: Peptidase M4, propeptide, PepSY; PepSY-associated TM helix; KEGG: neu:NE0550 hypothetical protein; propeptide PepSY amd peptidase M4 3196429..3197691 Methylomonas methanica MC09 10672892 YP_004513770.1 CDS Metme_2891 NC_015572.1 3197840 3200221 D KEGG: neu:NE0546 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3197840..3200221 Methylomonas methanica MC09 10672893 YP_004513771.1 CDS Metme_2892 NC_015572.1 3200218 3200415 R hypothetical protein complement(3200218..3200415) Methylomonas methanica MC09 10672894 YP_004513772.1 CDS Metme_2893 NC_015572.1 3200440 3200970 D KEGG: cse:Cseg_0483 RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 3200440..3200970 Methylomonas methanica MC09 10672895 YP_004513773.1 CDS Metme_2894 NC_015572.1 3201011 3202027 D PFAM: FecR protein; KEGG: neu:NE0548 transmembrane sensor; anti-FecI sigma factor FecR 3201011..3202027 Methylomonas methanica MC09 10672896 YP_004513774.1 CDS Metme_2895 NC_015572.1 3202201 3204555 D KEGG: neu:NE0546 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3202201..3204555 Methylomonas methanica MC09 10672897 YP_004513775.1 CDS Metme_2896 NC_015572.1 3204645 3205874 D PFAM: PepSY-associated TM helix; KEGG: neu:NE0550 hypothetical protein; PepSY-associated TM helix domain-containing protein 3204645..3205874 Methylomonas methanica MC09 10672898 YP_004513776.1 CDS Metme_2897 NC_015572.1 3206155 3206658 D KEGG: xau:Xaut_2777 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 3206155..3206658 Methylomonas methanica MC09 10672899 YP_004513777.1 CDS Metme_2898 NC_015572.1 3206681 3207643 D PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor; anti-FecI sigma factor FecR 3206681..3207643 Methylomonas methanica MC09 10672900 YP_004513778.1 CDS Metme_2899 NC_015572.1 3207725 3210115 D KEGG: neu:NE0556 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3207725..3210115 Methylomonas methanica MC09 10672901 YP_004513779.1 CDS Metme_2900 NC_015572.1 3210510 3211022 D KEGG: neu:NE0554 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 3210510..3211022 Methylomonas methanica MC09 10672902 YP_004513780.1 CDS Metme_2901 NC_015572.1 3211092 3212075 D PFAM: FecR protein; KEGG: dac:Daci_5891 anti-FecI sigma factor FecR; anti-FecI sigma factor FecR 3211092..3212075 Methylomonas methanica MC09 10672903 YP_004513781.1 CDS Metme_2902 NC_015572.1 3212221 3214626 D KEGG: neu:NE0546 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3212221..3214626 Methylomonas methanica MC09 10672904 YP_004513782.1 CDS Metme_2903 NC_015572.1 3215013 3215531 D KEGG: xau:Xaut_2777 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 3215013..3215531 Methylomonas methanica MC09 10672905 YP_004513783.1 CDS Metme_2904 NC_015572.1 3215659 3216618 D PFAM: FecR protein; KEGG: ara:Arad_7665 FecR iron sensor protein; anti-FecI sigma factor FecR 3215659..3216618 Methylomonas methanica MC09 10672906 YP_004513784.1 CDS Metme_2905 NC_015572.1 3216763 3219165 D KEGG: neu:NE0546 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3216763..3219165 Methylomonas methanica MC09 10672907 YP_004513785.1 CDS Metme_2906 NC_015572.1 3219849 3220010 D hypothetical protein 3219849..3220010 Methylomonas methanica MC09 10672908 YP_004513786.1 CDS Metme_2907 NC_015572.1 3220374 3221459 R PFAM: Radical SAM; KEGG: mca:MCA0073 pyruvate formate lyase-activating enzyme; radical SAM protein complement(3220374..3221459) Methylomonas methanica MC09 10672909 YP_004513787.1 CDS Metme_2908 NC_015572.1 3221685 3222464 D PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related; KEGG: mca:MCA0072 hypothetical protein; hypothetical protein 3221685..3222464 Methylomonas methanica MC09 10672910 YP_004513788.1 CDS Metme_2909 NC_015572.1 3222451 3223008 D KEGG: mca:MCA0071 hypothetical protein; TIGRFAM: AMMECR1; PFAM: AMMECR1; AMMECR1 domain-containing protein 3222451..3223008 Methylomonas methanica MC09 10672911 YP_004513789.1 CDS Metme_2910 NC_015572.1 3223170 3224639 D TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: fbl:Fbal_1965 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 3223170..3224639 Methylomonas methanica MC09 10672912 YP_004513790.1 CDS Metme_2911 NC_015572.1 3224672 3225382 D KEGG: cja:CJA_1351 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; 6-phosphogluconolactonase 3224672..3225382 Methylomonas methanica MC09 10672913 YP_004513791.1 CDS Metme_2912 NC_015572.1 3225512 3226900 D PFAM: Uncharacterised conserved protein UCP028704, OpgC; KEGG: mca:MCA1763 hypothetical protein; hypothetical protein 3225512..3226900 Methylomonas methanica MC09 10672914 YP_004513792.1 CDS Metme_2913 NC_015572.1 3226949 3228769 D TIGRFAM: 6-phosphogluconate dehydratase; KEGG: pat:Patl_0972 phosphogluconate dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; 6-phosphogluconate dehydratase 3226949..3228769 Methylomonas methanica MC09 10672915 YP_004513793.1 CDS Metme_2914 NC_015572.1 3228911 3229540 D TIGRFAM: KDPG/KHG aldolase; KEGG: mca:MCA0038 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; PFAM: KDPG/KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 3228911..3229540 Methylomonas methanica MC09 10672916 YP_004513794.1 CDS Metme_2915 NC_015572.1 3229550 3229993 D KEGG: mpt:Mpe_A0377 rod shape-determining-related protein; rod shape-determining-like protein 3229550..3229993 Methylomonas methanica MC09 10672917 YP_004513795.1 CDS Metme_2916 NC_015572.1 3230018 3230518 D KEGG: pna:Pnap_1740 transposase; transposase 3230018..3230518 Methylomonas methanica MC09 10672918 YP_004513796.1 CDS Metme_2917 NC_015572.1 3230515 3231597 D PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit 3230515..3231597 Methylomonas methanica MC09 10672919 YP_004513797.1 CDS Metme_2918 NC_015572.1 3231944 3232513 D KEGG: slt:Slit_0172 cytochrome b561; cytochrome b561 3231944..3232513 Methylomonas methanica MC09 10672920 YP_004513798.1 CDS Metme_2919 NC_015572.1 3232685 3234130 D TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: wch:wcw_0356 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 3232685..3234130 Methylomonas methanica MC09 10672921 YP_004513799.1 CDS Metme_2920 NC_015572.1 3234228 3234743 R KEGG: mca:MCA2012 hypothetical protein; hypothetical protein complement(3234228..3234743) Methylomonas methanica MC09 10672922 YP_004513800.1 CDS Metme_2921 NC_015572.1 3234897 3235289 R PFAM: Stress responsive alpha-beta barrel; KEGG: mca:MCA0759 hypothetical protein; stress responsive alpha-beta barrel domain-containing protein complement(3234897..3235289) Methylomonas methanica MC09 10672923 YP_004513801.1 CDS Metme_2922 NC_015572.1 3235286 3235849 R PFAM: Redoxin; KEGG: cts:Ctha_1949 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; redoxin domain-containing protein complement(3235286..3235849) Methylomonas methanica MC09 10672924 YP_004513802.1 CDS Metme_2923 NC_015572.1 3235970 3241102 D PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; Serine/threonine-protein kinase-like domain; KEGG: phytochrome sensor protein; SMART: ATP-binding region, ATPase-like; GAF; Serine/threonine-protein kinase domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; multi-sensor signal transduction multi-kinase 3235970..3241102 Methylomonas methanica MC09 10672925 YP_004513803.1 CDS Metme_2924 NC_015572.1 3241170 3241871 D KEGG: rfr:Rfer_3573 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 3241170..3241871 Methylomonas methanica MC09 10672926 YP_004513804.1 CDS Metme_2925 NC_015572.1 3241886 3244258 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; PAS fold; KEGG: lch:Lcho_3018 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3241886..3244258 Methylomonas methanica MC09 10672927 YP_004513805.1 CDS Metme_2926 NC_015572.1 3244345 3245010 D TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: swd:Swoo_0346 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 3244345..3245010 Methylomonas methanica MC09 10672928 YP_004513806.1 CDS Metme_2927 NC_015572.1 3245077 3250230 D TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: DNA/RNA helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA helicase, UvrD/REP type; KEGG: gca:Galf_1432 ATP-dependent DNA helicase, RecQ family; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; ATP-dependent DNA helicase RecQ 3245077..3250230 Methylomonas methanica MC09 10672929 YP_004513807.1 CDS Metme_2928 NC_015572.1 3250276 3250818 D KEGG: cyc:PCC7424_3277 protein of unknown function DUF1568; hypothetical protein 3250276..3250818 Methylomonas methanica MC09 10672930 YP_004513808.1 CDS Metme_2929 NC_015572.1 3250969 3252654 D SMART: Toll-Interleukin receptor; KEGG: amr:AM1_1973 leucine-rich repeat-containing protein; TIR protein 3250969..3252654 Methylomonas methanica MC09 10672931 YP_004513809.1 CDS Metme_2930 NC_015572.1 3252792 3253975 D KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein join(3252792..3253055,3253055..3253975) Methylomonas methanica MC09 10672932 YP_004513810.1 CDS Metme_2931 NC_015572.1 3254360 3255145 R TIGRFAM: Methyltransferase FkbM; KEGG: rba:RB9235 nodulation protein NoeI- methyltransferase; FkbM family methyltransferase complement(3254360..3255145) Methylomonas methanica MC09 10672933 YP_004513811.1 CDS Metme_2932 NC_015572.1 3255392 3255643 D PFAM: Modulator of Rho-dependent transcription termination; KEGG: neu:NE0186 hypothetical protein; Modulator of Rho-dependent transcription termination 3255392..3255643 Methylomonas methanica MC09 10672934 YP_004513812.1 CDS Metme_2933 NC_015572.1 3256002 3257690 D SMART: Diguanylate cyclase, predicted; PAS; PAC motif; TIGRFAM: Diguanylate cyclase, predicted; PAS; KEGG: eat:EAT1b_1219 diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s); PFAM: Diguanylate cyclase, predicted; PAS fold; MHYT; PAS/PAC sensor-containing diguanylate cyclase 3256002..3257690 Methylomonas methanica MC09 10672935 YP_004513813.1 CDS Metme_2934 NC_015572.1 3258091 3259500 R KEGG: mca:MCA1677 glutamine synthetase, type I; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; type I glutamine synthetase complement(3258091..3259500) Methylomonas methanica MC09 10672936 YP_004513814.1 CDS Metme_2935 NC_015572.1 3259659 3260858 R PFAM: Protein of unknown function DUF1597; KEGG: nhl:Nhal_3279 protein of unknown function DUF1597; hypothetical protein complement(3259659..3260858) Methylomonas methanica MC09 10672937 YP_004513815.1 CDS Metme_2936 NC_015572.1 3261290 3261628 D PFAM: Nitrogen regulatory protein PII; KEGG: pcr:Pcryo_2346 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 3261290..3261628 Methylomonas methanica MC09 10672938 YP_004513816.1 CDS Metme_2937 NC_015572.1 3261650 3262912 D KEGG: tcx:Tcr_1500 ammonium transporter; TIGRFAM: Probable ammonium transporter, marine subtype; Ammonium transporter; PFAM: Ammonium transporter; ammonium transporter 3261650..3262912 Methylomonas methanica MC09 10672939 YP_004513817.1 CDS Metme_2938 NC_015572.1 3263079 3263417 D PFAM: Nitrogen regulatory protein PII; KEGG: abo:ABO_2530 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 3263079..3263417 Methylomonas methanica MC09 10672940 YP_004513818.1 CDS Metme_2939 NC_015572.1 3263544 3264830 D KEGG: ttu:TERTU_2481 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter; ammonium transporter 3263544..3264830 Methylomonas methanica MC09 10672941 YP_004513819.1 CDS Metme_2940 NC_015572.1 3264914 3265678 D PFAM: Inositol monophosphatase; KEGG: cpi:Cpin_1028 inositol monophosphatase; inositol monophosphatase 3264914..3265678 Methylomonas methanica MC09 10672942 YP_004513820.1 CDS Metme_2941 NC_015572.1 3265934 3268444 D TIGRFAM: Diguanylate cyclase, predicted; PAS; Haemerythrin-like, metal-binding; PFAM: Diguanylate cyclase, predicted; Transcriptional regulator, histidine kinase sensor, N-terminal; PAS fold; GAF; Haemerythrin/HHE cation-binding motif; KEGG: ant:Arnit_1186 PAS/PAC and GAF sensor-containg diguanylate cyclase; SMART: Diguanylate cyclase, predicted; GAF; PAS; diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain 3265934..3268444 Methylomonas methanica MC09 10672943 YP_004513821.1 CDS Metme_2942 NC_015572.1 3268465 3270291 R PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: scl:sce2651 carbohydrate ABC transporter; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase complement(3268465..3270291) Methylomonas methanica MC09 10672944 YP_004513822.1 CDS Metme_2943 NC_015572.1 3270806 3271660 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: hel:HELO_4408 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(3270806..3271660) Methylomonas methanica MC09 10672945 YP_004513823.1 CDS Metme_2944 NC_015572.1 3271696 3272559 R KEGG: dar:Daro_1831 hypothetical protein; hypothetical protein complement(3271696..3272559) Methylomonas methanica MC09 10672946 YP_004513824.1 CDS Metme_2945 NC_015572.1 3272572 3275019 R TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mca:MCA0805 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(3272572..3275019) Methylomonas methanica MC09 10672947 YP_004513825.1 CDS Metme_2946 NC_015572.1 3275079 3275693 R KEGG: mca:MCA0804 hypothetical protein; hypothetical protein complement(3275079..3275693) Methylomonas methanica MC09 10672948 YP_004513826.1 CDS Metme_2947 NC_015572.1 3275814 3276098 R KEGG: mag:amb2913 hypothetical protein; hypothetical protein complement(3275814..3276098) Methylomonas methanica MC09 10672949 YP_004513827.1 CDS Metme_2948 NC_015572.1 3276124 3276303 R KEGG: mca:MCA0802 hypothetical protein; hypothetical protein complement(3276124..3276303) Methylomonas methanica MC09 10672950 YP_004513828.1 CDS Metme_2949 NC_015572.1 3276454 3276696 R KEGG: mag:amb2919 hypothetical protein; hypothetical protein complement(3276454..3276696) Methylomonas methanica MC09 10672951 YP_004513829.1 CDS Metme_2950 NC_015572.1 3277104 3278537 R KEGG: tgr:Tgr7_0560 hypothetical protein; hypothetical protein complement(3277104..3278537) Methylomonas methanica MC09 10672952 YP_004513830.1 CDS Metme_2951 NC_015572.1 3278625 3279944 R PFAM: Flagellar hook-length control protein; KEGG: psa:PST_2582 flagellar hook-length control protein FliK; flagellar hook-length control protein complement(3278625..3279944) Methylomonas methanica MC09 10672953 YP_004513831.1 CDS Metme_2952 NC_015572.1 3279972 3280424 R TIGRFAM: Flagellar export FliJ; KEGG: pag:PLES_42161 flagellar biosynthesis chaperone; flagellar export protein FliJ complement(3279972..3280424) Methylomonas methanica MC09 10672954 YP_004513832.1 CDS Metme_2953 NC_015572.1 3280421 3281770 R TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: aeh:Mlg_0712 flagellar protein export ATPase FliI; SMART: ATPase, AAA+ type, core; flagellar protein export ATPase FliI complement(3280421..3281770) Methylomonas methanica MC09 10672955 YP_004513833.1 CDS Metme_2954 NC_015572.1 3281767 3282498 R PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: aeh:Mlg_0711 flagellar assembly protein FliH; flagellar assembly protein FliH complement(3281767..3282498) Methylomonas methanica MC09 10672956 YP_004513834.1 CDS Metme_2955 NC_015572.1 3282485 3283495 R KEGG: tgr:Tgr7_1968 flagellar motor switch protein G; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(3282485..3283495) Methylomonas methanica MC09 10672957 YP_004513835.1 CDS Metme_2956 NC_015572.1 3283488 3285230 R KEGG: nhl:Nhal_2345 flagellar M-ring protein FliF; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Secretory protein YscJ/FliF; Flagellar M-ring C-terminal; flagellar M-ring protein FliF complement(3283488..3285230) Methylomonas methanica MC09 10672958 YP_004513836.1 CDS Metme_2957 NC_015572.1 3285250 3285564 R TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: tgr:Tgr7_1970 flagellar hook-basal body protein FliE; PFAM: Flagellar hook-basal body complex protein FliE; Flagellar hook-basal body complex protein fliE complement(3285250..3285564) Methylomonas methanica MC09 10672959 YP_004513837.1 CDS Metme_2958 NC_015572.1 3285619 3287010 R KEGG: vfm:VFMJ11_1986 two-component response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator complement(3285619..3287010) Methylomonas methanica MC09 10672960 YP_004513838.1 CDS Metme_2959 NC_015572.1 3286997 3288205 R KEGG: maq:Maqu_2000 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAS/PAC sensor signal transduction histidine kinase complement(3286997..3288205) Methylomonas methanica MC09 10672961 YP_004513839.1 CDS Metme_2960 NC_015572.1 3288315 3289805 R KEGG: tgr:Tgr7_1973 response regulator receiver protein; PFAM: RNA polymerase sigma factor 54, interaction; Flagellar regulatory FleQ; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; Fis family transcriptional regulator complement(3288315..3289805) Methylomonas methanica MC09 10672962 YP_004513840.1 CDS Metme_2961 NC_015572.1 3289977 3291230 D PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: alv:Alvin_2216 hypothetical protein; hypothetical protein 3289977..3291230 Methylomonas methanica MC09 10672963 YP_004513841.1 CDS Metme_2962 NC_015572.1 3291416 3292123 D PFAM: Methyltransferase type 11; TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; HAMAP: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mca:MCA1272 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 3291416..3292123 Methylomonas methanica MC09 10672964 YP_004513842.1 CDS Metme_2963 NC_015572.1 3292130 3292804 D TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: mep:MPQ_1677 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase 3292130..3292804 Methylomonas methanica MC09 10672965 YP_004513843.1 CDS Metme_2964 NC_015572.1 3292795 3293523 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: maq:Maqu_2497 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3292795..3293523 Methylomonas methanica MC09 10672966 YP_004513844.1 CDS Metme_2965 NC_015572.1 3293532 3294080 D KEGG: mca:MCA1270 hypothetical protein; TIGRFAM: FeS assembly SUF system protein SufT, PFAM: Protein of unknown function DUF59; FeS assembly SUF system protein SufT 3293532..3294080 Methylomonas methanica MC09 10672967 YP_004513845.1 CDS Metme_2966 NC_015572.1 3294216 3295100 D SMART: Diguanylate cyclase, predicted; TIGRFAM: Diguanylate cyclase, predicted; KEGG: pfo:Pfl01_4084 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; diguanylate cyclase 3294216..3295100 Methylomonas methanica MC09 10672968 YP_004513846.1 CDS Metme_2967 NC_015572.1 3295154 3295777 R TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; HAMAP: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; KEGG: mca:MCA1783 outer membrane lipoprotein carrier protein LolA; PFAM: Outer membrane lipoprotein carrier protein LolA; Outer-membrane lipoprotein carrier protein complement(3295154..3295777) Methylomonas methanica MC09 10672969 YP_004513847.1 CDS Metme_2968 NC_015572.1 3295780 3298119 R PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; manually curated; KEGG: mca:MCA1672 penicillin-binding protein, TIGRFAM: Penicillin-binding protein 1B; penicillin-binding protein 1B complement(3295780..3298119) Methylomonas methanica MC09 10672970 YP_004513848.1 CDS Metme_2969 NC_015572.1 3298417 3298692 D PFAM: Type IV pilus assembly PilZ; type IV pilus assembly PilZ 3298417..3298692 Methylomonas methanica MC09 10672971 YP_004513849.1 CDS Metme_2970 NC_015572.1 3298697 3299209 R KEGG: hypothetical protein; hypothetical protein complement(3298697..3299209) Methylomonas methanica MC09 10672972 YP_004513850.1 CDS Metme_2971 NC_015572.1 3299307 3301400 D SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: mca:MCA2201 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; UvrABC system protein B 3299307..3301400 Methylomonas methanica MC09 10672973 YP_004513851.1 CDS Metme_2972 NC_015572.1 3301573 3303657 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: gca:Galf_2779 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase complement(3301573..3303657) Methylomonas methanica MC09 10672974 YP_004513852.1 CDS Metme_2973 NC_015572.1 3303916 3307590 D KEGG: ppw:PputW619_0761 exodeoxyribonuclease V subunit beta; TIGRFAM: Exodeoxyribonuclease V, beta subunit; PFAM: DNA helicase, UvrD/REP type; exodeoxyribonuclease V subunit beta 3303916..3307590 Methylomonas methanica MC09 10672975 YP_004513853.1 CDS Metme_2974 NC_015572.1 3307587 3309542 D TIGRFAM: Exodeoxyribonuclease V, alpha subunit; KEGG: ppf:Pput_4536 exodeoxyribonuclease V, alpha subunit; SMART: ATPase, AAA+ type, core; exodeoxyribonuclease V subunit alpha 3307587..3309542 Methylomonas methanica MC09 10672976 YP_004513854.1 CDS Metme_2975 NC_015572.1 3309648 3310196 D KEGG: rba:RB9338 formaldehyde-activating enzyme; TIGRFAM: Formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme; formaldehyde-activating enzyme 3309648..3310196 Methylomonas methanica MC09 10672977 YP_004513855.1 CDS Metme_2976 NC_015572.1 3310290 3310757 R KEGG: eba:ebA2110 bacterioferritin subunit; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin complement(3310290..3310757) Methylomonas methanica MC09 10672978 YP_004513856.1 CDS Metme_2977 NC_015572.1 3311040 3311132 R hypothetical protein complement(3311040..3311132) Methylomonas methanica MC09 10672979 YP_004513857.1 CDS Metme_2979 NC_015572.1 3312304 3312495 R KEGG: app:CAP2UW1_1817 hypothetical protein; hypothetical protein complement(3312304..3312495) Methylomonas methanica MC09 10672981 YP_004513858.1 CDS Metme_2980 NC_015572.1 3312452 3312997 R KEGG: sus:Acid_2325 hypothetical protein; hypothetical protein complement(3312452..3312997) Methylomonas methanica MC09 10672982 YP_004513859.1 CDS Metme_2981 NC_015572.1 3313060 3313569 R hypothetical protein complement(3313060..3313569) Methylomonas methanica MC09 10672983 YP_004513860.1 CDS Metme_2982 NC_015572.1 3314014 3314532 R KEGG: pol:Bpro_1524 hypothetical protein; hypothetical protein complement(3314014..3314532) Methylomonas methanica MC09 10672984 YP_004513861.1 CDS Metme_2983 NC_015572.1 3314532 3315227 R KEGG: pol:Bpro_1523 hypothetical protein; hypothetical protein complement(3314532..3315227) Methylomonas methanica MC09 10672985 YP_004513862.1 CDS Metme_2984 NC_015572.1 3315239 3315364 R hypothetical protein complement(3315239..3315364) Methylomonas methanica MC09 10672986 YP_004513863.1 CDS Metme_2985 NC_015572.1 3315379 3316290 R KEGG: pol:Bpro_5210 hypothetical protein; hypothetical protein complement(3315379..3316290) Methylomonas methanica MC09 10672987 YP_004513864.1 CDS Metme_2986 NC_015572.1 3316861 3317466 R PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: lch:Lcho_3369 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(3316861..3317466) Methylomonas methanica MC09 10672988 YP_004513865.1 CDS Metme_2987 NC_015572.1 3317519 3319129 R PFAM: Alkaline phosphatase D-related; KEGG: rme:Rmet_2583 alkaline phosphatase; alkaline phosphatase complement(3317519..3319129) Methylomonas methanica MC09 10672989 YP_004513866.1 CDS Metme_2988 NC_015572.1 3319378 3320229 D PFAM: Protein of unknown function DUF6, transmembrane; KEGG: pna:Pnap_2935 hypothetical protein; hypothetical protein 3319378..3320229 Methylomonas methanica MC09 10672990 YP_004513867.1 CDS Metme_2989 NC_015572.1 3320371 3320607 D KEGG: net:Neut_2281 thioredoxin; thioredoxin 3320371..3320607 Methylomonas methanica MC09 10672991 YP_004513868.1 CDS Metme_2990 NC_015572.1 3320620 3320811 D KEGG: mca:MCA1444 hypothetical protein; hypothetical protein 3320620..3320811 Methylomonas methanica MC09 10672992 YP_004513869.1 CDS Metme_2991 NC_015572.1 3320815 3321171 D hypothetical protein 3320815..3321171 Methylomonas methanica MC09 10672993 YP_004513870.1 CDS Metme_2992 NC_015572.1 3321321 3322229 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase complement(3321321..3322229) Methylomonas methanica MC09 10672994 YP_004513871.1 CDS Metme_2993 NC_015572.1 3322222 3327051 R TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; CHASE; PAS fold; PAS fold-4; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: ctt:CtCNB1_1514 proline sensor PrlS; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase complement(3322222..3327051) Methylomonas methanica MC09 10672995 YP_004513872.1 CDS Metme_2994 NC_015572.1 3327374 3328885 D KEGG: mca:MCA0866 oxygen-independent coproporphyrinogen III oxidase, PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 3327374..3328885 Methylomonas methanica MC09 10672996 YP_004513873.1 CDS Metme_2995 NC_015572.1 3328980 3329564 R PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ank:AnaeK_0239 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3328980..3329564) Methylomonas methanica MC09 10672997 YP_004513874.1 CDS Metme_2997 NC_015572.1 3330404 3331486 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(3330404..3331486) Methylomonas methanica MC09 10672998 YP_004513875.1 CDS Metme_2998 NC_015572.1 3331483 3331983 R KEGG: pna:Pnap_1740 transposase; transposase complement(3331483..3331983) Methylomonas methanica MC09 10672999 YP_004513876.1 CDS Metme_2999 NC_015572.1 3332857 3333474 D KEGG: swd:Swoo_1073 cytochrome P460; cytochrome P460 3332857..3333474 Methylomonas methanica MC09 10673000 YP_004513877.1 CDS Metme_3000 NC_015572.1 3333524 3333919 D KEGG: sde:Sde_2765 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3333524..3333919 Methylomonas methanica MC09 10673001 YP_004513878.1 CDS Metme_3001 NC_015572.1 3333916 3334503 D PFAM: Uracil-DNA glycosylase-like; KEGG: pha:PSHAb0040 uracil-DNA glycosylase; uracil-DNA glycosylase 3333916..3334503 Methylomonas methanica MC09 10673002 YP_004513879.1 CDS Metme_3002 NC_015572.1 3334659 3335123 D PFAM: Protein of unknown function DUF805; KEGG: pfl:PFL_5614 hypothetical protein; hypothetical protein 3334659..3335123 Methylomonas methanica MC09 10673003 YP_004513880.1 CDS Metme_3003 NC_015572.1 3335159 3335902 R KEGG: ethanolamine ammonia-lyase; PFAM: Ethanolamine ammonia-lyase light chain; ethanolamine ammonia-lyase complement(3335159..3335902) Methylomonas methanica MC09 10673004 YP_004513881.1 CDS Metme_3004 NC_015572.1 3335899 3337287 R KEGG: ethanolamine ammonia-lyase; PFAM: Ethanolamine ammonia lyase large subunit; ethanolamine ammonia-lyase complement(3335899..3337287) Methylomonas methanica MC09 10673005 YP_004513882.1 CDS Metme_3005 NC_015572.1 3337460 3338608 R PFAM: Glycosyl transferase, family 19; TIGRFAM: Glycosyl transferase, family 19; HAMAP: Lipid-A-disaccharide synthase; KEGG: mca:MCA0400 lipid-A-disaccharide synthase; lipid-A-disaccharide synthase complement(3337460..3338608) Methylomonas methanica MC09 10673006 YP_004513883.1 CDS Metme_3006 NC_015572.1 3338687 3339781 R KEGG: mca:MCA0399 aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase complement(3338687..3339781) Methylomonas methanica MC09 10673007 YP_004513884.1 CDS Metme_3007 NC_015572.1 3339794 3340732 R PFAM: Oxidoreductase, N-terminal; KEGG: mca:MCA0398 Gfo/Idh/MocA family oxidoreductase; oxidoreductase domain-containing protein complement(3339794..3340732) Methylomonas methanica MC09 10673008 YP_004513885.1 CDS Metme_3008 NC_015572.1 3340980 3343241 R TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mca:MCA2072 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(3340980..3343241) Methylomonas methanica MC09 10673009 YP_004513886.1 CDS Metme_3009 NC_015572.1 3343295 3343504 R PFAM: Heavy metal transport/detoxification protein; KEGG: mca:MCA0611 mercuric ion binding protein; heavy metal transport/detoxification protein complement(3343295..3343504) Methylomonas methanica MC09 10673010 YP_004513887.1 CDS Metme_3010 NC_015572.1 3343640 3344842 D KEGG: nhl:Nhal_2335 EAL domain protein; PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase metal dependent hydrolase domain-containing protein 3343640..3344842 Methylomonas methanica MC09 10673011 YP_004513888.1 CDS Metme_3011 NC_015572.1 3344858 3345298 D KEGG: mca:MCA2612 rhodanese-like domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 3344858..3345298 Methylomonas methanica MC09 10673012 YP_004513889.1 CDS Metme_3012 NC_015572.1 3345304 3345927 D KEGG: mca:MCA0201 hypothetical protein; HAMAP: Uncharacterised protein family UPF0274; PFAM: Uncharacterised protein family UPF0274; High frequency lysogenization protein hflD 3345304..3345927 Methylomonas methanica MC09 10673013 YP_004513890.1 CDS Metme_3013 NC_015572.1 3345933 3346748 D PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: tcx:Tcr_1921 formamidopyrimidine-DNA glycosylase; Formamidopyrimidine-DNA glycosylase 3345933..3346748 Methylomonas methanica MC09 10673014 YP_004513891.1 CDS Metme_3014 NC_015572.1 3346755 3348392 R KEGG: mgm:Mmc1_3580 response regulator receiver protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; response regulator receiver modulated serine phosphatase complement(3346755..3348392) Methylomonas methanica MC09 10673015 YP_004513892.1 CDS Metme_3015 NC_015572.1 3348451 3348900 D KEGG: net:Neut_1871 hypothetical protein; hypothetical protein 3348451..3348900 Methylomonas methanica MC09 10673016 YP_004513893.1 CDS Metme_3016 NC_015572.1 3348907 3349143 R KEGG: psp:PSPPH_5014 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02647; PFAM: Conserved hypothetical protein CHP02647; hypothetical protein complement(3348907..3349143) Methylomonas methanica MC09 10673017 YP_004513894.1 CDS Metme_3017 NC_015572.1 3349173 3349949 R PFAM: Phospholipase/carboxylesterase; KEGG: tbd:Tbd_2669 hypothetical protein; phospholipase/carboxylesterase complement(3349173..3349949) Methylomonas methanica MC09 10673018 YP_004513895.1 CDS Metme_3018 NC_015572.1 3349946 3351025 R PFAM: Uncharacterised protein family UPF0118; KEGG: tgr:Tgr7_2250 permease; hypothetical protein complement(3349946..3351025) Methylomonas methanica MC09 10673019 YP_004513896.1 CDS Metme_3019 NC_015572.1 3351107 3351436 R KEGG: sse:Ssed_3278 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(3351107..3351436) Methylomonas methanica MC09 10673020 YP_004513897.1 CDS Metme_3020 NC_015572.1 3351929 3352291 R hypothetical protein complement(3351929..3352291) Methylomonas methanica MC09 10673021 YP_004513898.1 CDS Metme_3021 NC_015572.1 3352427 3352834 R KEGG: mca:MCA1820 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02096; PFAM: Protein of unknown function DUF1486; hypothetical protein complement(3352427..3352834) Methylomonas methanica MC09 10673022 YP_004513899.1 CDS Metme_3022 NC_015572.1 3352898 3353434 R TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: mgm:Mmc1_0537 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; cob(I)alamin adenosyltransferase complement(3352898..3353434) Methylomonas methanica MC09 10673023 YP_004513900.1 CDS Metme_3023 NC_015572.1 3353431 3354693 R PFAM: CobB/CobQ-like glutamine amidotransferase; KEGG: gwc:GWCH70_1559 cobyrinic acid a,c-diamide synthase; CobB/CobQ domain-containing protein glutamine amidotransferase complement(3353431..3354693) Methylomonas methanica MC09 10673024 YP_004513901.1 CDS Metme_3024 NC_015572.1 3354722 3354988 R KEGG: ttu:TERTU_4530 hypothetical protein; hypothetical protein complement(3354722..3354988) Methylomonas methanica MC09 10673025 YP_004513902.1 CDS Metme_3025 NC_015572.1 3354996 3355193 R hypothetical protein complement(3354996..3355193) Methylomonas methanica MC09 10673026 YP_004513903.1 CDS Metme_3026 NC_015572.1 3355200 3357515 R PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: mca:MCA1695 cell division protein FtsK; DNA translocase FtsK complement(3355200..3357515) Methylomonas methanica MC09 10673027 YP_004513904.1 CDS Metme_3027 NC_015572.1 3358020 3358976 D TIGRFAM: Thioredoxin reductase; KEGG: mca:MCA1694 thioredoxin-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 3358020..3358976 Methylomonas methanica MC09 10673028 YP_004513905.1 CDS Metme_3028 NC_015572.1 3359020 3359712 D PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: neu:NE2219 leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 3359020..3359712 Methylomonas methanica MC09 10673029 YP_004513906.1 CDS Metme_3029 NC_015572.1 3359709 3360428 D KEGG: mca:MCA1791 arginyl-tRNA-protein transferase; HAMAP: Arginine-tRNA-protein transferase, predicted, prokaryotic; PFAM: Arginine-tRNA-protein transferase, C-terminal; Arginine-tRNA-protein transferase, N-terminal; arginyl-tRNA-protein transferase 3359709..3360428 Methylomonas methanica MC09 10673030 YP_004513907.1 CDS Metme_3030 NC_015572.1 3360432 3360998 D KEGG: tcx:Tcr_0790 elongation factor P/YeiP; HAMAP: Translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor P/YeiP, central; Translation elongation factor, KOW-like; elongation factor P 3360432..3360998 Methylomonas methanica MC09 10673031 YP_004513908.1 CDS Metme_3031 NC_015572.1 3361447 3363711 D TIGRFAM: CRISPR-associated HD domain; HDIG; Helicase Cas3, CRISPR-associated, core; PFAM: DNA/RNA helicase, C-terminal; KEGG: mfa:Mfla_0601 metal dependent phosphohydrolase; SMART: DEAD-like helicase, N-terminal; CRISPR-associated HD domain-containing protein 3361447..3363711 Methylomonas methanica MC09 10673032 YP_004513909.1 CDS Metme_3032 NC_015572.1 3363855 3363992 D hypothetical protein 3363855..3363992 Methylomonas methanica MC09 10673033 YP_004513910.1 CDS Metme_3033 NC_015572.1 3364221 3364904 D KEGG: mfa:Mfla_0602 CRISPR-associated Cas5d family protein; TIGRFAM: CRISPR-associated protein, Cas5d-type; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5d-type; CRISPR-associated protein Cas5 family 3364221..3364904 Methylomonas methanica MC09 10673034 YP_004513911.1 CDS Metme_3034 NC_015572.1 3364901 3366724 D KEGG: mfa:Mfla_0603 CRISPR-associated Csd1 family protein; TIGRFAM: CRISPR-associated protein, Csd1-type; PFAM: CRISPR-associated protein, Csd1-type; CRISPR-associated protein, Csd1 family 3364901..3366724 Methylomonas methanica MC09 10673035 YP_004513912.1 CDS Metme_3035 NC_015572.1 3366730 3367605 D KEGG: mfa:Mfla_0604 CRISPR-associated Csh2 family protein; TIGRFAM: CRISPR-associated protein Csd2; CRISPR-associated protein TM1801; PFAM: CRISPR-associated protein TM1801; CRISPR-associated protein, Csd2 family 3366730..3367605 Methylomonas methanica MC09 10673036 YP_004513913.1 CDS Metme_3036 NC_015572.1 3367719 3367970 D hypothetical protein 3367719..3367970 Methylomonas methanica MC09 10673037 YP_004513914.1 CDS Metme_3037 NC_015572.1 3368033 3368656 D KEGG: cvi:CV_1228 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4; CRISPR-associated protein Cas4 3368033..3368656 Methylomonas methanica MC09 10673038 YP_004513915.1 CDS Metme_3038 NC_015572.1 3368659 3369693 D KEGG: cvi:CV_1229 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1, DVULG subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas1 3368659..3369693 Methylomonas methanica MC09 10673039 YP_004513916.1 CDS Metme_3039 NC_015572.1 3369709 3369999 D TIGRFAM: Protein of unknown function DUF196; KEGG: psa:PST_3751 CRISPR-associated Cas2 family protein; CRISPR-associated protein Cas2 3369709..3369999 Methylomonas methanica MC09 10673040 YP_004513917.1 CDS Metme_3040 NC_015572.1 3371211 3372394 R KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(join(3371211..3372131,3372131..3372394)) Methylomonas methanica MC09 10673041 YP_004513918.1 CDS Metme_3041 NC_015572.1 3373374 3374456 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(3373374..3374456) Methylomonas methanica MC09 10673042 YP_004513919.1 CDS Metme_3042 NC_015572.1 3374453 3374953 R KEGG: pna:Pnap_1740 transposase; transposase complement(3374453..3374953) Methylomonas methanica MC09 10673043 YP_004513920.1 CDS Metme_3043 NC_015572.1 3376264 3377055 R hypothetical protein complement(3376264..3377055) Methylomonas methanica MC09 10673044 YP_004513921.1 CDS Metme_3044 NC_015572.1 3377180 3377926 R hypothetical protein complement(3377180..3377926) Methylomonas methanica MC09 10673045 YP_004513922.1 CDS Metme_3045 NC_015572.1 3378362 3380755 R KEGG: rpb:RPB_2554 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor complement(3378362..3380755) Methylomonas methanica MC09 10673046 YP_004513923.1 CDS Metme_3046 NC_015572.1 3380987 3382036 R PFAM: FecR protein; KEGG: nde:NIDE2185 ferric citrate sensor FecR; anti-FecI sigma factor FecR complement(3380987..3382036) Methylomonas methanica MC09 10673047 YP_004513924.1 CDS Metme_3047 NC_015572.1 3382130 3382657 R KEGG: dar:Daro_1832 sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3382130..3382657) Methylomonas methanica MC09 10673048 YP_004513925.1 CDS Metme_3048 NC_015572.1 3382925 3383143 D TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: gpb:HDN1F_15710 translation initiation factor IF-1; PFAM: S1, IF1 type; translation initiation factor IF-1 3382925..3383143 Methylomonas methanica MC09 10673049 YP_004513926.1 CDS Metme_3049 NC_015572.1 3383180 3385459 R TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: mca:MCA1789 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: ATPase, AAA+ type, core; ATP-dependent Clp protease ATP-binding subunit ClpA complement(3383180..3385459) Methylomonas methanica MC09 10673050 YP_004513927.1 CDS Metme_3050 NC_015572.1 3385469 3385792 R KEGG: hha:Hhal_1401 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adapter protein clpS; PFAM: Adaptor protein ClpS, core; ATP-dependent Clp protease adapter protein clpS complement(3385469..3385792) Methylomonas methanica MC09 10673051 YP_004513928.1 CDS Metme_3051 NC_015572.1 3385917 3386372 D PFAM: NUDIX hydrolase domain; KEGG: app:CAP2UW1_2937 NUDIX hydrolase; NUDIX hydrolase 3385917..3386372 Methylomonas methanica MC09 10673052 YP_004513929.1 CDS Metme_3052 NC_015572.1 3386369 3387463 D TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: mca:MCA1785 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; tRNA-specific 2-thiouridylase mnmA 3386369..3387463 Methylomonas methanica MC09 10673053 YP_004513930.1 CDS Metme_3053 NC_015572.1 3387584 3388942 D TIGRFAM: Adenylosuccinate lyase; KEGG: tgr:Tgr7_1849 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase; adenylosuccinate lyase 3387584..3388942 Methylomonas methanica MC09 10673054 YP_004513931.1 CDS Metme_3054 NC_015572.1 3388961 3390190 D PFAM: Nucleoside recognition; KEGG: tbd:Tbd_1045 hypothetical protein; nucleoside recognition domain-containing protein 3388961..3390190 Methylomonas methanica MC09 10673055 YP_004513932.1 CDS Metme_3055 NC_015572.1 3390198 3391484 D TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; KEGG: kko:Kkor_0838 MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme 3390198..3391484 Methylomonas methanica MC09 10673056 YP_004513933.1 CDS Metme_3056 NC_015572.1 3391533 3392309 R PFAM: VacJ-like lipoprotein; KEGG: mca:MCA2076 VacJ lipoprotein; VacJ family lipoprotein complement(3391533..3392309) Methylomonas methanica MC09 10673057 YP_004513934.1 CDS Metme_3057 NC_015572.1 3392487 3393272 R PFAM: VacJ-like lipoprotein; KEGG: mca:MCA2076 VacJ lipoprotein; VacJ family lipoprotein complement(3392487..3393272) Methylomonas methanica MC09 10673058 YP_004513935.1 CDS Metme_3058 NC_015572.1 3393364 3393990 D SMART: Exonuclease; TIGRFAM: Ribonuclease T; KEGG: mca:MCA2077 ribonuclease T; HAMAP: Ribonuclease T; PFAM: Exonuclease, RNase T/DNA polymerase III; Ribonuclease T 3393364..3393990 Methylomonas methanica MC09 10673059 YP_004513936.1 CDS Metme_3059 NC_015572.1 3394029 3394337 R KEGG: hch:HCH_01764 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin; glutaredoxin-like protein complement(3394029..3394337) Methylomonas methanica MC09 10673060 YP_004513937.1 CDS Metme_3060 NC_015572.1 3394405 3395439 R TIGRFAM: DNA polymerase III, delta subunit; KEGG: tgr:Tgr7_2277 DNA-directed DNA polymerase; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta complement(3394405..3395439) Methylomonas methanica MC09 10673061 YP_004513938.1 CDS Metme_3061 NC_015572.1 3395442 3395942 R PFAM: Rare lipoprotein B; KEGG: slt:Slit_2848 rare lipoprotein B; Rare lipoprotein B complement(3395442..3395942) Methylomonas methanica MC09 10673062 YP_004513939.1 CDS Metme_3062 NC_015572.1 3395968 3398556 R TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: tcx:Tcr_0479 leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(3395968..3398556) Methylomonas methanica MC09 10673063 YP_004513940.1 CDS Metme_3063 NC_015572.1 3398648 3399136 D PFAM: Protein of unknown function DUF1451; KEGG: aeh:Mlg_0399 hypothetical protein; hypothetical protein 3398648..3399136 Methylomonas methanica MC09 10673064 YP_004513941.1 CDS Metme_3064 NC_015572.1 3399196 3399969 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mca:MCA1454 ParA family protein; Cobyrinic acid ac-diamide synthase 3399196..3399969 Methylomonas methanica MC09 10673065 YP_004513942.1 CDS Metme_3065 NC_015572.1 3400292 3400846 R KEGG: amc:MADE_02672 cytochrome b561; cytochrome b561 complement(3400292..3400846) Methylomonas methanica MC09 10673066 YP_004513943.1 CDS Metme_3066 NC_015572.1 3400908 3402371 R TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: mca:MCA1455 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(3400908..3402371) Methylomonas methanica MC09 10673067 YP_004513944.1 CDS Metme_3067 NC_015572.1 3402535 3404043 D KEGG: abo:ABO_2444 hypothetical protein; hypothetical protein 3402535..3404043 Methylomonas methanica MC09 10673068 YP_004513945.1 CDS Metme_3068 NC_015572.1 3404104 3404655 D PFAM: Protein of unknown function DUF1311; KEGG: dma:DMR_02520 hypothetical protein; hypothetical protein 3404104..3404655 Methylomonas methanica MC09 10673069 YP_004513946.1 CDS Metme_3069 NC_015572.1 3404887 3406089 D PFAM: Cation/H+ exchanger; KEGG: cyn:Cyan7425_0565 sodium/hydrogen exchanger; sodium/hydrogen exchanger 3404887..3406089 Methylomonas methanica MC09 10673070 YP_004513947.1 CDS Metme_3070 NC_015572.1 3406094 3406954 R KEGG: meh:M301_0039 transglutaminase domain protein; PFAM: Transglutaminase-like; Bacterial transglutaminase-like, N-terminal; SMART: Transglutaminase-like; transglutaminase domain-containing protein complement(3406094..3406954) Methylomonas methanica MC09 10673071 YP_004513948.1 CDS Metme_3071 NC_015572.1 3406961 3407761 R KEGG: meh:M301_0038 transglutaminase domain protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; transglutaminase domain-containing protein complement(3406961..3407761) Methylomonas methanica MC09 10673072 YP_004513949.1 CDS Metme_3072 NC_015572.1 3407987 3410380 R TIGRFAM: Phosphoenolpyruvate synthase; KEGG: tin:Tint_0437 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme; phosphoenolpyruvate synthase complement(3407987..3410380) Methylomonas methanica MC09 10673073 YP_004513950.1 CDS Metme_3073 NC_015572.1 3410565 3411422 R KEGG: amc:MADE_03229 predicted aspartyl protease; hypothetical protein complement(3410565..3411422) Methylomonas methanica MC09 10673074 YP_004513951.1 CDS Metme_3074 NC_015572.1 3411520 3412377 D hypothetical protein 3411520..3412377 Methylomonas methanica MC09 10673075 YP_004513952.1 CDS Metme_3075 NC_015572.1 3412753 3413100 R hypothetical protein complement(3412753..3413100) Methylomonas methanica MC09 10673076 YP_004513953.1 CDS Metme_3076 NC_015572.1 3413869 3415056 D KEGG: lbf:LBF_2804 hypothetical protein; hypothetical protein 3413869..3415056 Methylomonas methanica MC09 10673077 YP_004513954.1 CDS Metme_3077 NC_015572.1 3415243 3415902 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mep:MPQ_2515 pyridoxamine 5'-phosphate oxidase-related fmn-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3415243..3415902 Methylomonas methanica MC09 10673078 YP_004513955.1 CDS Metme_3078 NC_015572.1 3416083 3417009 R PFAM: Type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(3416083..3417009) Methylomonas methanica MC09 10673079 YP_004513956.1 CDS Metme_3079 NC_015572.1 3417246 3418091 R PFAM: Aldo/keto reductase; KEGG: mca:MCA0485 aldo/keto reductase oxidoreductase; aldo/keto reductase complement(3417246..3418091) Methylomonas methanica MC09 10673080 YP_004513957.1 CDS Metme_3080 NC_015572.1 3418308 3419747 D TIGRFAM: Nitrogenase MoFe cofactor biosynthesis protein NifE; KEGG: avn:Avin_01450 nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase/oxidoreductase, component 1; nitrogenase MoFe cofactor biosynthesis protein NifE 3418308..3419747 Methylomonas methanica MC09 10673081 YP_004513958.1 CDS Metme_3081 NC_015572.1 3419749 3421146 D TIGRFAM: Nitrogenase molybdenum-iron cofactor biosynthesis protein; KEGG: slt:Slit_0904 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: Nitrogenase/oxidoreductase, component 1; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 3419749..3421146 Methylomonas methanica MC09 10673082 YP_004513959.1 CDS Metme_3082 NC_015572.1 3421191 3421622 D PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: avn:Avin_01480 nitrogenase MoFe cofactor biosynthesis protein NifX; dinitrogenase iron-molybdenum cofactor biosynthesis protein 3421191..3421622 Methylomonas methanica MC09 10673083 YP_004513960.1 CDS Metme_3083 NC_015572.1 3421694 3422167 D KEGG: psa:PST_1336 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0460; PFAM: Uncharacterised protein family UPF0460; nitrogen fixation protein 3421694..3422167 Methylomonas methanica MC09 10673084 YP_004513961.1 CDS Metme_3084 NC_015572.1 3422179 3422394 D PFAM: Uncharacterised protein family UPF0437; KEGG: alv:Alvin_0907 hypothetical protein; hypothetical protein 3422179..3422394 Methylomonas methanica MC09 10673085 YP_004513962.1 CDS Metme_3085 NC_015572.1 3422405 3422722 D KEGG: mgm:Mmc1_1191 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; TIGRFAM: Ferredoxin III 4[4Fe-4S], nif-specific; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; ferredoxin III 3422405..3422722 Methylomonas methanica MC09 10673086 YP_004513963.1 CDS Metme_3086 NC_015572.1 3423344 3423667 D KEGG: azo:azo3368 ferredoxin 2Fe-2S protein; (2Fe-2S) ferredoxin 3423344..3423667 Methylomonas methanica MC09 10673087 YP_004513964.1 CDS Metme_3087 NC_015572.1 3423671 3424177 D KEGG: azl:AZL_006580 hypothetical protein; hypothetical protein 3423671..3424177 Methylomonas methanica MC09 10673088 YP_004513965.1 CDS Metme_3088 NC_015572.1 3424174 3424551 D KEGG: dar:Daro_1511 hypothetical protein; hypothetical protein 3424174..3424551 Methylomonas methanica MC09 10673089 YP_004513966.1 CDS Metme_3089 NC_015572.1 3424560 3425534 D PFAM: Protein of unknown function DUF364; KEGG: mca:MCA2834 hypothetical protein; hypothetical protein 3424560..3425534 Methylomonas methanica MC09 10673090 YP_004513967.1 CDS Metme_3090 NC_015572.1 3425539 3425982 D KEGG: dar:Daro_1512 hypothetical protein; hypothetical protein 3425539..3425982 Methylomonas methanica MC09 10673091 YP_004513968.1 CDS Metme_3091 NC_015572.1 3425984 3427240 D PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: net:Neut_0446 hypothetical protein; hypothetical protein 3425984..3427240 Methylomonas methanica MC09 10673092 YP_004513969.1 CDS Metme_3092 NC_015572.1 3427304 3427600 R hypothetical protein complement(3427304..3427600) Methylomonas methanica MC09 10673093 YP_004513970.1 CDS Metme_3093 NC_015572.1 3428148 3430550 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; PAS fold-4; Signal transduction response regulator, C-terminal; KEGG: azo:azo1544 GGDEF/EAL/PAC/PAS-domain-containing protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3428148..3430550 Methylomonas methanica MC09 10673094 YP_004513971.1 CDS Metme_3094 NC_015572.1 3431012 3433867 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; MASE1; PAS fold-3; PAS fold; KEGG: slt:Slit_0879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3431012..3433867 Methylomonas methanica MC09 10673095 YP_004513972.1 CDS Metme_3095 NC_015572.1 3433980 3434411 R PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: apa:APP7_0420 sigma-E factor regulatory protein; sigma E positive regulator RseC/MucC complement(3433980..3434411) Methylomonas methanica MC09 10673096 YP_004513973.1 CDS Metme_3096 NC_015572.1 3434404 3434805 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dar:Daro_1421 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(3434404..3434805) Methylomonas methanica MC09 10673097 YP_004513974.1 CDS Metme_3097 NC_015572.1 3434816 3435349 R KEGG: azo:azo2281 flavodoxin FldA; TIGRFAM: Flavodoxin, long chain; PFAM: Flavodoxin/nitric oxide synthase; flavodoxin complement(3434816..3435349) Methylomonas methanica MC09 10673098 YP_004513975.1 CDS Metme_3098 NC_015572.1 3435374 3435991 R KEGG: mca:MCA0259 glutaredoxin-related protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin; BolA-like protein; glutaredoxin-like protein complement(3435374..3435991) Methylomonas methanica MC09 10673099 YP_004513976.1 CDS Metme_3099 NC_015572.1 3436068 3437363 R SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: mca:MCA1829 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; ATP-dependent Clp protease ATP-binding subunit ClpX complement(3436068..3437363) Methylomonas methanica MC09 10673100 YP_004513977.1 CDS Metme_3100 NC_015572.1 3437405 3438262 R KEGG: azo:azo0546 peptidylprolyl isomerase; TIGRFAM: Nitrogen fixation protein NifM; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; nitrogen fixation protein NifM complement(3437405..3438262) Methylomonas methanica MC09 10673101 YP_004513978.1 CDS Metme_3101 NC_015572.1 3438262 3438741 R PFAM: NifZ; KEGG: azo:azo0547 nitrogen fixation protein; NifZ family protein complement(3438262..3438741) Methylomonas methanica MC09 10673102 YP_004513979.1 CDS Metme_3102 NC_015572.1 3438738 3439052 R KEGG: ttu:TERTU_1593 nitrogen fixation protein NifW; HAMAP: Nitrogenase-stabilizing/protective protein nifW; PFAM: Nitrogen fixation protein NifW; nitrogenase-stabilizing/protective protein nifW complement(3438738..3439052) Methylomonas methanica MC09 10673103 YP_004513980.1 CDS Metme_3103 NC_015572.1 3439057 3439179 R hypothetical protein complement(3439057..3439179) Methylomonas methanica MC09 10673104 YP_004513981.1 CDS Metme_3104 NC_015572.1 3439256 3439420 R hypothetical protein complement(3439256..3439420) Methylomonas methanica MC09 10673105 YP_004513982.1 CDS Metme_3105 NC_015572.1 3439422 3439928 R KEGG: slt:Slit_0809 hypothetical protein; hypothetical protein complement(3439422..3439928) Methylomonas methanica MC09 10673106 YP_004513983.1 CDS Metme_3106 NC_015572.1 3439928 3440707 R KEGG: mca:MCA1830 serine acetyltransferase; TIGRFAM: Serine O-acetyltransferase; serine O-acetyltransferase complement(3439928..3440707) Methylomonas methanica MC09 10673107 YP_004513984.1 CDS Metme_3107 NC_015572.1 3440704 3440871 R hypothetical protein complement(3440704..3440871) Methylomonas methanica MC09 10673108 YP_004513985.1 CDS Metme_3108 NC_015572.1 3440884 3442008 R TIGRFAM: Homocitrate synthase NifV-type; KEGG: alv:Alvin_1499 homocitrate synthase; PFAM: Pyruvate carboxyltransferase; homocitrate synthase complement(3440884..3442008) Methylomonas methanica MC09 10673109 YP_004513986.1 CDS Metme_3109 NC_015572.1 3442356 3442571 D PFAM: Protein of unknown function DUF2191; KEGG: gpb:HDN1F_25630 hypothetical protein; hypothetical protein 3442356..3442571 Methylomonas methanica MC09 10673110 YP_004513987.1 CDS Metme_3110 NC_015572.1 3442540 3442854 D KEGG: mar:MAE_17540 PilT protein-like protein; twitching motility protein PilT 3442540..3442854 Methylomonas methanica MC09 10673111 YP_004513988.1 CDS Metme_3113 NC_015572.1 3444073 3445515 R PFAM: Dihydropteroate synthase, DHPS; KEGG: mca:MCA1245 pterin-binding domain-containing protein; dihydropteroate synthase DHPS complement(3444073..3445515) Methylomonas methanica MC09 10673114 YP_004513989.1 CDS Metme_3114 NC_015572.1 3445554 3446327 R KEGG: 5,10-methylenetetrahydrofolate reductase-like protein; 5,10-methylenetetrahydrofolate reductase complement(3445554..3446327) Methylomonas methanica MC09 10673115 YP_004513990.1 CDS Metme_3115 NC_015572.1 3446327 3448000 R HAMAP: Formate-tetrahydrofolate ligase, FTHFS; KEGG: mca:MCA2219 formate--tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS; Formate--tetrahydrofolate ligase complement(3446327..3448000) Methylomonas methanica MC09 10673116 YP_004513991.1 CDS Metme_3116 NC_015572.1 3448095 3450386 R PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; HAMAP: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; KEGG: mms:mma_0750 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(3448095..3450386) Methylomonas methanica MC09 10673117 YP_004513992.1 CDS Metme_3117 NC_015572.1 3450494 3451378 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tgr:Tgr7_0617 transcriptional regulator, LysR family; LysR family transcriptional regulator 3450494..3451378 Methylomonas methanica MC09 10673118 YP_004513993.1 CDS Metme_3118 NC_015572.1 3451517 3451867 D KEGG: neu:NE1162 hypothetical protein; hypothetical protein 3451517..3451867 Methylomonas methanica MC09 10673119 YP_004513994.1 CDS Metme_3119 NC_015572.1 3452358 3455150 D KEGG: mep:MPQ_1143 ribonucleoside-diphosphate reductase, alpha subunit; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone; ribonucleoside-diphosphate reductase subunit alpha 3452358..3455150 Methylomonas methanica MC09 10673120 YP_004513995.1 CDS Metme_3120 NC_015572.1 3455147 3456310 D KEGG: lip:LI0477 ribonucleotide reductase, beta subunit; PFAM: Ribonucleotide reductase; ribonucleoside-diphosphate reductase 3455147..3456310 Methylomonas methanica MC09 10673121 YP_004513996.1 CDS Metme_3121 NC_015572.1 3456391 3456645 D manually curated; KEGG: lbf:LBF_2417 hypothetical protein; hypothetical protein 3456391..3456645 Methylomonas methanica MC09 10673122 YP_004513997.1 CDS Metme_3122 NC_015572.1 3457021 3457611 D KEGG: ppd:Ppro_0505 hypothetical protein; hypothetical protein 3457021..3457611 Methylomonas methanica MC09 10673123 YP_004513998.1 CDS Metme_3123 NC_015572.1 3457728 3459767 R KEGG: mms:mma_2474 autotransporter; TIGRFAM: Extracellular HAF; PFAM: Autotransporter beta-domain; extracellular repeat-containing protein, HAF family complement(3457728..3459767) Methylomonas methanica MC09 10673124 YP_004513999.1 CDS Metme_3124 NC_015572.1 3460127 3461560 R KEGG: sde:Sde_3059 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR; GntR family transcriptional regulator complement(3460127..3461560) Methylomonas methanica MC09 10673125 YP_004514000.1 CDS Metme_3125 NC_015572.1 3461678 3462949 R PFAM: Monooxygenase, FAD-binding; KEGG: amr:AM1_2225 hypothetical protein; monooxygenase FAD-binding protein complement(3461678..3462949) Methylomonas methanica MC09 10673126 YP_004514001.1 CDS Metme_3126 NC_015572.1 3463004 3463291 R KEGG: mpt:Mpe_A3473 hypothetical protein; hypothetical protein complement(3463004..3463291) Methylomonas methanica MC09 10673127 YP_004514002.1 CDS Metme_3127 NC_015572.1 3463284 3464459 R PFAM: Glycosyl transferase, group 1; KEGG: pna:Pnap_2100 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3463284..3464459) Methylomonas methanica MC09 10673128 YP_004514003.1 CDS Metme_3128 NC_015572.1 3464462 3465430 R PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; KEGG: pna:Pnap_2101 AIR synthase related protein; AIR synthase-like protein complement(3464462..3465430) Methylomonas methanica MC09 10673129 YP_004514004.1 CDS Metme_3129 NC_015572.1 3465427 3465969 R PFAM: GCN5-related N-acetyltransferase; KEGG: sno:Snov_3715 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3465427..3465969) Methylomonas methanica MC09 10673130 YP_004514005.1 CDS Metme_3130 NC_015572.1 3465971 3467083 R KEGG: mea:Mex_2p1116 oxidoreductase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(3465971..3467083) Methylomonas methanica MC09 10673131 YP_004514006.1 CDS Metme_3131 NC_015572.1 3467061 3468056 R KEGG: bvi:Bcep1808_6052 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase complement(3467061..3468056) Methylomonas methanica MC09 10673132 YP_004514007.1 CDS Metme_3132 NC_015572.1 3468127 3468609 R KEGG: azc:AZC_0073 hypothetical protein; hypothetical protein complement(3468127..3468609) Methylomonas methanica MC09 10673133 YP_004514008.1 CDS Metme_3134 NC_015572.1 3469286 3469831 D hypothetical protein 3469286..3469831 Methylomonas methanica MC09 10673135 YP_004514009.1 CDS Metme_3135 NC_015572.1 3469944 3470204 R hypothetical protein complement(3469944..3470204) Methylomonas methanica MC09 10673136 YP_004514010.1 CDS Metme_3136 NC_015572.1 3470304 3471518 R TIGRFAM: Cysteine desulfurase, NifS, bacterial/archaeal; KEGG: slt:Slit_0806 cysteine desulfurase NifS; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase complement(3470304..3471518) Methylomonas methanica MC09 10673137 YP_004514011.1 CDS Metme_3137 NC_015572.1 3471511 3472428 R KEGG: slt:Slit_0805 Fe-S cluster assembly protein NifU; TIGRFAM: NIF system FeS cluster assembly, NifU; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; BFD-like [2Fe-2S]-binding region; NIF system FeS cluster assembly, NifU, C-terminal; Fe-S cluster assembly protein NifU complement(3471511..3472428) Methylomonas methanica MC09 10673138 YP_004514012.1 CDS Metme_3138 NC_015572.1 3472447 3472803 R KEGG: psa:PST_1349 Fe-S cluster assembly protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein complement(3472447..3472803) Methylomonas methanica MC09 10673139 YP_004514013.1 CDS Metme_3139 NC_015572.1 3472999 3473259 D KEGG: azo:azo3367 NifZ protein; NifZ protein 3472999..3473259 Methylomonas methanica MC09 10673140 YP_004514014.1 CDS Metme_3140 NC_015572.1 3473325 3474917 D PFAM: Nitroreductase-like; KEGG: nhl:Nhal_2027 hypothetical protein; nitroreductase 3473325..3474917 Methylomonas methanica MC09 10673141 YP_004514015.1 CDS Metme_3141 NC_015572.1 3474936 3475529 R PFAM: Protein of unknown function DUF330; KEGG: ppd:Ppro_0404 hypothetical protein; hypothetical protein complement(3474936..3475529) Methylomonas methanica MC09 10673142 YP_004514016.1 CDS Metme_3142 NC_015572.1 3475542 3476567 R PFAM: Mammalian cell entry related; KEGG: sat:SYN_02068 paraquat-inducible protein B; mammalian cell entry domain-containing protein complement(3475542..3476567) Methylomonas methanica MC09 10673143 YP_004514017.1 CDS Metme_3143 NC_015572.1 3476570 3477346 R PFAM: ABC transporter-like; KEGG: sfu:Sfum_2415 ABC transporter related; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase complement(3476570..3477346) Methylomonas methanica MC09 10673144 YP_004514018.1 CDS Metme_3144 NC_015572.1 3477361 3478518 R KEGG: sfu:Sfum_2414 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; hypothetical protein complement(3477361..3478518) Methylomonas methanica MC09 10673145 YP_004514019.1 CDS Metme_3145 NC_015572.1 3478759 3479187 R KEGG: swi:Swit_2819 hypothetical protein; HAMAP: Uncharacterised conserved protein UCP006173; PFAM: Uncharacterised protein family UPF0153; hypothetical protein complement(3478759..3479187) Methylomonas methanica MC09 10673146 YP_004514020.1 CDS Metme_3146 NC_015572.1 3479189 3480154 R PFAM: Protein of unknown function DUF214, permase predicted; KEGG: mca:MCA0135 protein insertion permease FtsX; hypothetical protein complement(3479189..3480154) Methylomonas methanica MC09 10673147 YP_004514021.1 CDS Metme_3147 NC_015572.1 3480157 3480813 R SMART: ATPase, AAA+ type, core; TIGRFAM: Cell division ATP-binding protein FtsE; KEGG: mca:MCA0134 cell division ATP-binding protein FtsE; PFAM: ABC transporter-like; cell division ATP-binding protein FtsE complement(3480157..3480813) Methylomonas methanica MC09 10673148 YP_004514022.1 CDS Metme_3148 NC_015572.1 3480818 3482782 R TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Cytochrome oxidase assembly; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: mca:MCA0133 cytochrome oxidase assembly family protein/cell division protein FtsY; SMART: ATPase, AAA+ type, core; signal recognition particle-docking protein FtsY complement(3480818..3482782) Methylomonas methanica MC09 10673149 YP_004514023.1 CDS Metme_3149 NC_015572.1 3482787 3483377 R KEGG: mca:MCA0132 hypothetical protein; hypothetical protein complement(3482787..3483377) Methylomonas methanica MC09 10673150 YP_004514024.1 CDS Metme_3150 NC_015572.1 3483361 3484107 R KEGG: mca:MCA0131 hypothetical protein; hypothetical protein complement(3483361..3484107) Methylomonas methanica MC09 10673151 YP_004514025.1 CDS Metme_3151 NC_015572.1 3484195 3484461 D KEGG: lpa:lpa_00641 hypothetical protein; hypothetical protein 3484195..3484461 Methylomonas methanica MC09 10673152 YP_004514026.1 CDS Metme_3152 NC_015572.1 3484521 3485396 R KEGG: mca:MCA0883 cytochrome c oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III; cytochrome-c oxidase complement(3484521..3485396) Methylomonas methanica MC09 10673153 YP_004514027.1 CDS Metme_3153 NC_015572.1 3485411 3485953 R PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: mca:MCA0882 cytochrome c oxidase assembly protein; cytochrome c oxidase assembly protein CtaG/Cox11 complement(3485411..3485953) Methylomonas methanica MC09 10673154 YP_004514028.1 CDS Metme_3154 NC_015572.1 3486108 3487724 R KEGG: mca:MCA0880 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I complement(3486108..3487724) Methylomonas methanica MC09 10673155 YP_004514029.1 CDS Metme_3155 NC_015572.1 3487779 3488909 R KEGG: mca:MCA0879 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane region; Cytochrome c, class I; cytochrome c oxidase subunit II complement(3487779..3488909) Methylomonas methanica MC09 10673156 YP_004514030.1 CDS Metme_3156 NC_015572.1 3489149 3489544 R KEGG: mca:MCA0715 hemerythrin family protein; TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Haemerythrin/HHE cation-binding motif; hemerythrin-like metal-binding protein complement(3489149..3489544) Methylomonas methanica MC09 10673157 YP_004514031.1 CDS Metme_3157 NC_015572.1 3489632 3490297 R KEGG: xcv:XCV3736 dithiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; dethiobiotin synthetase complement(3489632..3490297) Methylomonas methanica MC09 10673158 YP_004514032.1 CDS Metme_3158 NC_015572.1 3490294 3491085 R KEGG: mca:MCA1128 biotin synthesis protein BioC; TIGRFAM: Biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; biotin biosynthesis protein BioC complement(3490294..3491085) Methylomonas methanica MC09 10673159 YP_004514033.1 CDS Metme_3159 NC_015572.1 3491082 3491843 R TIGRFAM: BioH; KEGG: mca:MCA1127 BioH protein; PFAM: Alpha/beta hydrolase fold-1; bioH protein complement(3491082..3491843) Methylomonas methanica MC09 10673160 YP_004514034.1 CDS Metme_3160 NC_015572.1 3491840 3493000 R PFAM: Aminotransferase, class I/II; TIGRFAM: 8-amino-7-oxononanoate synthase; HAMAP: 8-amino-7-oxononanoate synthase; KEGG: tgr:Tgr7_0133 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(3491840..3493000) Methylomonas methanica MC09 10673161 YP_004514035.1 CDS Metme_3161 NC_015572.1 3493000 3493989 R KEGG: mca:MCA1125 biotin synthetase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; TIGRFAM: Biotin synthase; HAMAP: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(3493000..3493989) Methylomonas methanica MC09 10673162 YP_004514036.1 CDS Metme_3162 NC_015572.1 3494058 3494756 D KEGG: mca:MCA1124 competence protein F; manually curated; PFAM: Phosphoribosyltransferase; phosphoribosyltransferase 3494058..3494756 Methylomonas methanica MC09 10673163 YP_004514037.1 CDS Metme_3163 NC_015572.1 3494812 3495288 R PFAM: Fertility inhibition FinO-like; KEGG: bch:Bcen2424_6185 ProQ activator of osmoprotectant transporter ProP; Fertility inhibition FinO-like protein complement(3494812..3495288) Methylomonas methanica MC09 10673164 YP_004514038.1 CDS Metme_3164 NC_015572.1 3495412 3495807 R hypothetical protein complement(3495412..3495807) Methylomonas methanica MC09 10673165 YP_004514039.1 CDS Metme_3165 NC_015572.1 3496108 3496419 D KEGG: eba:p2B15 plasmid-specific DNA primase; hypothetical protein 3496108..3496419 Methylomonas methanica MC09 10673166 YP_004514040.1 CDS Metme_3166 NC_015572.1 3496464 3497750 R PFAM: Sodium:dicarboxylate symporter; KEGG: rso:RSc0330 C4-dicarboxylate transporter DctA; sodium:dicarboxylate symporter complement(3496464..3497750) Methylomonas methanica MC09 10673167 YP_004514041.1 CDS Metme_3167 NC_015572.1 3497790 3498446 R PFAM: Protein of unknown function DUF1614; KEGG: nhl:Nhal_3859 protein of unknown function DUF1614; hypothetical protein complement(3497790..3498446) Methylomonas methanica MC09 10673168 YP_004514042.1 CDS Metme_3168 NC_015572.1 3498822 3499040 D KEGG: svo:SVI_2530 cold shock domain family protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 3498822..3499040 Methylomonas methanica MC09 10673169 YP_004514043.1 CDS Metme_3169 NC_015572.1 3499601 3499927 D hypothetical protein 3499601..3499927 Methylomonas methanica MC09 10673170 YP_004514044.1 CDS Metme_3170 NC_015572.1 3500053 3500559 D PFAM: Protein of unknown function DUF45; KEGG: ppr:PBPRB0636 metal-dependent hydrolase; hypothetical protein 3500053..3500559 Methylomonas methanica MC09 10673171 YP_004514045.1 CDS Metme_3171 NC_015572.1 3500572 3501531 R PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; KEGG: cyj:Cyan7822_4382 alcohol dehydrogenase GroES domain-containing protein; molecular chaperone GroES complement(3500572..3501531) Methylomonas methanica MC09 10673172 YP_004514046.1 CDS Metme_3172 NC_015572.1 3501898 3503016 D KEGG: lbf:LBF_2938 cAMP-binding protein; PFAM: Cyclic nucleotide-binding; GCN5-related N-acetyltransferase; SMART: Cyclic nucleotide-binding; cyclic nucleotide-binding protein 3501898..3503016 Methylomonas methanica MC09 10673173 YP_004514047.1 CDS Metme_3173 NC_015572.1 3503049 3504227 D PFAM: Protein of unknown function DUF214, permase predicted; KEGG: dde:Dde_0827 ABC transporter permease; hypothetical protein 3503049..3504227 Methylomonas methanica MC09 10673174 YP_004514048.1 CDS Metme_3174 NC_015572.1 3504343 3505212 D PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: nmu:Nmul_A0374 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD binding protein 3504343..3505212 Methylomonas methanica MC09 10673175 YP_004514049.1 CDS Metme_3175 NC_015572.1 3505194 3505952 R TIGRFAM: PEP-CTERM/exosortase system-associated acyltransferase; KEGG: aeh:Mlg_0150 hypothetical protein; PEP-CTERM/exosortase system-associated acyltransferase complement(3505194..3505952) Methylomonas methanica MC09 10673176 YP_004514050.1 CDS Metme_3176 NC_015572.1 3506817 3507536 D PFAM: ABC transporter-like; KEGG: lwe:lwe2530 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 3506817..3507536 Methylomonas methanica MC09 10673177 YP_004514051.1 CDS Metme_3177 NC_015572.1 3507560 3508534 D KEGG: dma:DMR_08170 secretion protein HlyD family protein; secretion protein HlyD family protein 3507560..3508534 Methylomonas methanica MC09 10673178 YP_004514052.1 CDS Metme_3178 NC_015572.1 3508536 3509924 R KEGG: nhl:Nhal_3271 sugar transferase, PEP-Cterm system associated; TIGRFAM: Sugar transferase, PEP-CTERM system associated; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; sugar transferase complement(3508536..3509924) Methylomonas methanica MC09 10673179 YP_004514053.1 CDS Metme_3179 NC_015572.1 3509973 3510731 R PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: nmu:Nmul_A2676 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap complement(3509973..3510731) Methylomonas methanica MC09 10673180 YP_004514054.1 CDS Metme_3180 NC_015572.1 3511358 3512242 R hypothetical protein complement(3511358..3512242) Methylomonas methanica MC09 10673181 YP_004514055.1 CDS Metme_3181 NC_015572.1 3512266 3513282 R TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: mca:MCA2526 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase complement(3512266..3513282) Methylomonas methanica MC09 10673182 YP_004514056.1 CDS Metme_3182 NC_015572.1 3513487 3513786 D KEGG: hch:HCH_02127 hypothetical protein; hypothetical protein 3513487..3513786 Methylomonas methanica MC09 10673183 YP_004514057.1 CDS Metme_3183 NC_015572.1 3513821 3514225 D PFAM: 6-pyruvoyl tetrahydropterin synthase-related; KEGG: mca:MCA2527 6-pyruvoyl tetrahydropterin synthase; hypothetical protein 3513821..3514225 Methylomonas methanica MC09 10673184 YP_004514058.1 CDS Metme_3184 NC_015572.1 3514227 3514673 D PFAM: Protein of unknown function DUF1249; KEGG: mca:MCA2528 hypothetical protein; hypothetical protein 3514227..3514673 Methylomonas methanica MC09 10673185 YP_004514059.1 CDS Metme_3185 NC_015572.1 3514666 3516870 R TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: mca:MCA1868 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; ATP-dependent DNA helicase RecQ complement(3514666..3516870) Methylomonas methanica MC09 10673186 YP_004514060.1 CDS Metme_3186 NC_015572.1 3516948 3518534 D TIGRFAM: Glutamate--cysteine ligase, monofunctional; HAMAP: Glutamate--cysteine ligase; KEGG: nhl:Nhal_3173 glutamate/cysteine ligase; PFAM: Glutamate--cysteine ligase; glutamate--cysteine ligase 3516948..3518534 Methylomonas methanica MC09 10673187 YP_004514061.1 CDS Metme_3187 NC_015572.1 3518531 3519253 D TIGRFAM: Adenylylsulphate reductase, thioredoxin dependent; Phosphoadenosine phosphosulphate reductase CysH-type; KEGG: maq:Maqu_1582 phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulphate reductase; adenylylsulfate reductase 3518531..3519253 Methylomonas methanica MC09 10673188 YP_004514062.1 CDS Metme_3188 NC_015572.1 3519271 3519903 R KEGG: xau:Xaut_2681 transcriptional regulator; transcriptional regulator complement(3519271..3519903) Methylomonas methanica MC09 10673189 YP_004514063.1 CDS Metme_3189 NC_015572.1 3520103 3520483 D PFAM: Globin, truncated bacterial-like; KEGG: mca:MCA2507 hypothetical protein; globin 3520103..3520483 Methylomonas methanica MC09 10673190 YP_004514064.1 CDS Metme_3190 NC_015572.1 3520498 3521484 D KEGG: mca:MCA2508 oxygenase, PFAM: Oxidoreductase FAD-binding region; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; ferredoxin--NAD(+) reductase 3520498..3521484 Methylomonas methanica MC09 10673191 YP_004514065.1 CDS Metme_3191 NC_015572.1 3521517 3522689 D KEGG: mmb:Mmol_0023 CBS domain containing membrane protein; PFAM: HPP; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; hypothetical protein 3521517..3522689 Methylomonas methanica MC09 10673192 YP_004514066.1 CDS Metme_3192 NC_015572.1 3523331 3523567 R hypothetical protein complement(3523331..3523567) Methylomonas methanica MC09 10673193 YP_004514067.1 CDS Metme_3193 NC_015572.1 3523587 3524177 R KEGG: dps:DP2046 hypothetical protein; hypothetical protein complement(3523587..3524177) Methylomonas methanica MC09 10673194 YP_004514068.1 CDS Metme_3194 NC_015572.1 3524174 3524614 R KEGG: dps:DP2045 hypothetical protein; hypothetical protein complement(3524174..3524614) Methylomonas methanica MC09 10673195 YP_004514069.1 CDS Metme_3196 NC_015572.1 3525418 3525714 R PFAM: CopG-like DNA-binding; KEGG: cat:CA2559_06880 hypothetical protein; CopG family transcriptional regulator complement(3525418..3525714) Methylomonas methanica MC09 10673197 YP_004514070.1 CDS Metme_3197 NC_015572.1 3526096 3526299 D hypothetical protein 3526096..3526299 Methylomonas methanica MC09 10673198 YP_004514071.1 CDS Metme_3198 NC_015572.1 3526435 3528033 D PFAM: Sulphate transporter; KEGG: mca:MCA1443 sulfate transporter family protein; sulfate transporter 3526435..3528033 Methylomonas methanica MC09 10673199 YP_004514072.1 CDS Metme_3199 NC_015572.1 3528055 3528651 R SMART: Toprim domain, subgroup; TIGRFAM: RecR protein; KEGG: aeh:Mlg_1508 recombination protein RecR; HAMAP: Recombination protein recR; PFAM: Toprim domain; Zinc finger C4-type, RecR; Recombination protein recR complement(3528055..3528651) Methylomonas methanica MC09 10673200 YP_004514073.1 CDS Metme_3200 NC_015572.1 3528654 3528977 R TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: mms:mma_2329 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; hypothetical protein complement(3528654..3528977) Methylomonas methanica MC09 10673201 YP_004514074.1 CDS Metme_3201 NC_015572.1 3528990 3530666 R SMART: ATPase, AAA+ type, core; manually curated; KEGG: mca:MCA1328 DNA polymerase III, gamma and tau subunits, programmed frameshift; TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; DNA polymerase III subunits gamma and tau complement(3528990..3530666) Methylomonas methanica MC09 10673202 YP_004514075.1 CDS Metme_3202 NC_015572.1 3530867 3531835 R KEGG: slt:Slit_1753 peptidase S49; TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49; signal peptide peptidase SppA, 36K type complement(3530867..3531835) Methylomonas methanica MC09 10673204 YP_004514076.1 CDS Metme_3203 NC_015572.1 3531847 3532494 R KEGG: rso:RSc1042 phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(3531847..3532494) Methylomonas methanica MC09 10673205 YP_004514077.1 CDS Metme_3204 NC_015572.1 3532478 3533437 R TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: 23S rRNA pseudouridylate synthase; SMART: RNA-binding S4; RluA family pseudouridine synthase complement(3532478..3533437) Methylomonas methanica MC09 10673206 YP_004514078.1 CDS Metme_3205 NC_015572.1 3533852 3536044 D KEGG: mca:MCA1481 ribonuclease E; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family 3533852..3536044 Methylomonas methanica MC09 10673207 YP_004514079.1 CDS Metme_3206 NC_015572.1 3536373 3538256 D PFAM: Cation/H+ exchanger; KEGG: ppf:Pput_4254 sodium/hydrogen exchanger; sodium/hydrogen exchanger 3536373..3538256 Methylomonas methanica MC09 10673208 YP_004514080.1 CDS Metme_3207 NC_015572.1 3538343 3539926 D TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; HAMAP: Peptide chain release factor 3; KEGG: mca:MCA1990 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; peptide chain release factor 3 3538343..3539926 Methylomonas methanica MC09 10673209 YP_004514081.1 CDS Metme_3208 NC_015572.1 3540477 3541474 D manually curated; KEGG: pph:Ppha_2017 hypothetical protein; hypothetical protein join(3540477..3540908,3540908..3541474) Methylomonas methanica MC09 10673210 YP_004514082.1 CDS Metme_3209 NC_015572.1 3541481 3542014 D KEGG: swd:Swoo_4266 hypothetical protein; hypothetical protein 3541481..3542014 Methylomonas methanica MC09 10673211 YP_004514083.1 CDS Metme_3210 NC_015572.1 3542412 3542957 D KEGG: azo:azo0014 flavodoxin FldA; TIGRFAM: Flavodoxin, long chain; PFAM: Flavodoxin/nitric oxide synthase; flavodoxin 3542412..3542957 Methylomonas methanica MC09 10673212 YP_004514084.1 CDS Metme_3211 NC_015572.1 3543109 3543540 R PFAM: GCN5-related N-acetyltransferase; KEGG: gcn5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3543109..3543540) Methylomonas methanica MC09 10673213 YP_004514085.1 CDS Metme_3212 NC_015572.1 3543762 3544307 R KEGG: dol:Dole_1113 transcriptional regulator, TrmB; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR complement(3543762..3544307) Methylomonas methanica MC09 10673214 YP_004514086.1 CDS Metme_3213 NC_015572.1 3544525 3544989 D KEGG: nhl:Nhal_2226 hypothetical protein; hypothetical protein 3544525..3544989 Methylomonas methanica MC09 10673215 YP_004514087.1 CDS Metme_3214 NC_015572.1 3544986 3546233 D TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: tgr:Tgr7_0180 allantoate amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; hydantoinase/carbamoylase amidase 3544986..3546233 Methylomonas methanica MC09 10673216 YP_004514088.1 CDS Metme_3215 NC_015572.1 3546230 3546979 D PFAM: Isochorismatase-like; KEGG: tkm:TK90_0028 isochorismatase hydrolase; isochorismatase hydrolase 3546230..3546979 Methylomonas methanica MC09 10673217 YP_004514089.1 CDS Metme_3216 NC_015572.1 3546976 3548412 D PFAM: Sodium/solute symporter; KEGG: nwa:Nwat_2329 Na+/solute symporter; Na+/solute symporter 3546976..3548412 Methylomonas methanica MC09 10673218 YP_004514090.1 CDS Metme_3217 NC_015572.1 3548409 3548531 D hypothetical protein 3548409..3548531 Methylomonas methanica MC09 10673219 YP_004514091.1 CDS Metme_3218 NC_015572.1 3548525 3549583 D KEGG: nhl:Nhal_2221 aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate carbamoyltransferase 3548525..3549583 Methylomonas methanica MC09 10673220 YP_004514092.1 CDS Metme_3219 NC_015572.1 3549585 3551591 D TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: tgr:Tgr7_0185 asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; asparagine synthase 3549585..3551591 Methylomonas methanica MC09 10673221 YP_004514093.1 CDS Metme_3220 NC_015572.1 3551724 3552191 D KEGG: tgr:Tgr7_2730 YbaK/EbsC protein; TIGRFAM: Conserved hypothetical protein CHP00011; PFAM: YbaK/aminoacyl-tRNA synthetase associated region; ybaK/ebsC protein 3551724..3552191 Methylomonas methanica MC09 10673222 YP_004514094.1 CDS Metme_3221 NC_015572.1 3552482 3554755 D PFAM: Peptidase C13, legumain; KEGG: app:CAP2UW1_3877 peptidase C13, legumain asparaginyl peptidase; peptidase C13, legumain asparaginyl peptidase 3552482..3554755 Methylomonas methanica MC09 10673223 YP_004514095.1 CDS Metme_3222 NC_015572.1 3555144 3556103 R PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: smt:Smal_3243 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(3555144..3556103) Methylomonas methanica MC09 10673224 YP_004514096.1 CDS Metme_3223 NC_015572.1 3556257 3556463 D hypothetical protein 3556257..3556463 Methylomonas methanica MC09 10673225 YP_004514097.1 CDS Metme_3224 NC_015572.1 3556959 3557189 D hypothetical protein 3556959..3557189 Methylomonas methanica MC09 10673226 YP_004514098.1 CDS Metme_3225 NC_015572.1 3557230 3557535 D KEGG: pwa:Pecwa_1396 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 3557230..3557535 Methylomonas methanica MC09 10673227 YP_004514099.1 CDS Metme_3226 NC_015572.1 3557507 3558508 D KEGG: hse:Hsero_2903 retron reverse transcriptase; retron reverse transcriptase 3557507..3558508 Methylomonas methanica MC09 10673228 YP_004514100.1 CDS Metme_3228 NC_015572.1 3558827 3559126 D hypothetical protein 3558827..3559126 Methylomonas methanica MC09 10673230 YP_004514101.1 CDS Metme_3229 NC_015572.1 3559242 3559742 D KEGG: swi:Swit_5220 hypothetical protein; hypothetical protein 3559242..3559742 Methylomonas methanica MC09 10673231 YP_004514102.1 CDS Metme_3230 NC_015572.1 3559898 3560500 D KEGG: mca:MCA1821 hypothetical protein; hypothetical protein 3559898..3560500 Methylomonas methanica MC09 10673232 YP_004514103.1 CDS Metme_3231 NC_015572.1 3560493 3561353 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mmw:Mmwyl1_3133 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3560493..3561353 Methylomonas methanica MC09 10673233 YP_004514104.1 CDS Metme_3232 NC_015572.1 3561534 3561923 D KEGG: nhl:Nhal_0869 hypothetical protein; hypothetical protein 3561534..3561923 Methylomonas methanica MC09 10673234 YP_004514105.1 CDS Metme_3233 NC_015572.1 3562004 3562807 R KEGG: cpc:Cpar_0567 beta-lactamase; PFAM: Penicillin-binding protein, transpeptidase; Beta-lactamase complement(3562004..3562807) Methylomonas methanica MC09 10673235 YP_004514106.1 CDS Metme_3234 NC_015572.1 3563139 3564014 D PFAM: MTH538 TIR-like domain; KEGG: gme:Gmet_1196 PASTA; hypothetical protein 3563139..3564014 Methylomonas methanica MC09 10673236 YP_004514107.1 CDS Metme_3235 NC_015572.1 3564065 3565501 R hypothetical protein complement(3564065..3565501) Methylomonas methanica MC09 10673237 YP_004514108.1 CDS Metme_3236 NC_015572.1 3565506 3566324 R hypothetical protein complement(3565506..3566324) Methylomonas methanica MC09 10673238 YP_004514109.1 CDS Metme_3237 NC_015572.1 3566356 3567354 R hypothetical protein complement(3566356..3567354) Methylomonas methanica MC09 10673239 YP_004514110.1 CDS Metme_3238 NC_015572.1 3567416 3568099 R hypothetical protein complement(3567416..3568099) Methylomonas methanica MC09 10673240 YP_004514111.1 CDS Metme_3239 NC_015572.1 3568268 3569821 R KEGG: nhl:Nhal_3060 sigma-54 factor interaction domain-containing protein; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; Fis family transcriptional regulator complement(3568268..3569821) Methylomonas methanica MC09 10673241 YP_004514112.1 CDS Metme_3240 NC_015572.1 3570042 3570692 D PFAM: Protein of unknown function DUF938; KEGG: nhl:Nhal_3059 protein of unknown function DUF938; hypothetical protein 3570042..3570692 Methylomonas methanica MC09 10673242 YP_004514113.1 CDS Metme_3241 NC_015572.1 3570703 3571281 D PFAM: Carbonic anhydrase; KEGG: mca:MCA0910 carbonic anhydrase; carbonic anhydrase 3570703..3571281 Methylomonas methanica MC09 10673243 YP_004514114.1 CDS Metme_3242 NC_015572.1 3571281 3572015 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nhl:Nhal_3057 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3571281..3572015 Methylomonas methanica MC09 10673244 YP_004514115.1 CDS Metme_3243 NC_015572.1 3572015 3572626 D PFAM: Protein of unknown function DUF1326; KEGG: nhl:Nhal_3068 protein of unknown function DUF1326; hypothetical protein 3572015..3572626 Methylomonas methanica MC09 10673245 YP_004514116.1 CDS Metme_3244 NC_015572.1 3572630 3573367 D PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: nhl:Nhal_3056 hypothetical protein; hypothetical protein 3572630..3573367 Methylomonas methanica MC09 10673246 YP_004514117.1 CDS Metme_3245 NC_015572.1 3573392 3573904 R KEGG: hypothetical protein; hypothetical protein complement(3573392..3573904) Methylomonas methanica MC09 10673247 YP_004514118.1 CDS Metme_3247 NC_015572.1 3574409 3575164 R KEGG: kko:Kkor_1034 hypothetical protein; hypothetical protein complement(3574409..3575164) Methylomonas methanica MC09 10673249 YP_004514119.1 CDS Metme_3248 NC_015572.1 3575671 3576804 R KEGG: dak:DaAHT2_0795 radical SAM enzyme, Cfr family; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; PFAM: Radical SAM; radical SAM family protein complement(3575671..3576804) Methylomonas methanica MC09 10673250 YP_004514120.1 CDS Metme_3249 NC_015572.1 3576804 3577652 R KEGG: slo:Shew_3508 hypothetical protein; hypothetical protein complement(3576804..3577652) Methylomonas methanica MC09 10673251 YP_004514121.1 CDS Metme_3250 NC_015572.1 3577726 3578253 D KEGG: geo:Geob_0349 protoporphyrinogen oxidase; protoporphyrinogen oxidase 3577726..3578253 Methylomonas methanica MC09 10673252 YP_004514122.1 CDS Metme_3251 NC_015572.1 3578317 3578640 R KEGG: mca:MCA1524 hypothetical protein; hypothetical protein complement(3578317..3578640) Methylomonas methanica MC09 10673253 YP_004514123.1 CDS Metme_3252 NC_015572.1 3578783 3579499 R PFAM: Peptidase S54, rhomboid; KEGG: dde:Dde_1446 rhomboid family protein; rhomboid family protein complement(3578783..3579499) Methylomonas methanica MC09 10673254 YP_004514124.1 CDS Metme_3253 NC_015572.1 3579542 3583432 R TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: mca:MCA1482 ATP-dependent helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal; ATP-dependent helicase HrpA complement(3579542..3583432) Methylomonas methanica MC09 10673255 YP_004514125.1 CDS Metme_3254 NC_015572.1 3583982 3587140 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; PAS fold; KEGG: rfr:Rfer_1983 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(3583982..3587140) Methylomonas methanica MC09 10673256 YP_004514126.1 CDS Metme_3255 NC_015572.1 3587141 3588202 R KEGG: eba:ebA6324 substrate-binding protein involved in ABC-type nitrate/sulfonate/bicarbonate transport system; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein complement(3587141..3588202) Methylomonas methanica MC09 10673257 YP_004514127.1 CDS Metme_3256 NC_015572.1 3588389 3589153 D TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 3588389..3589153 Methylomonas methanica MC09 10673258 YP_004514128.1 CDS Metme_3257 NC_015572.1 3589157 3590083 R PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: hoh:Hoch_2991 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3589157..3590083) Methylomonas methanica MC09 10673259 YP_004514129.1 CDS Metme_3258 NC_015572.1 3590193 3592994 D HAMAP: Phosphoenolpyruvate carboxylase; KEGG: nhl:Nhal_2213 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 3590193..3592994 Methylomonas methanica MC09 10673260 YP_004514130.1 CDS Metme_3259 NC_015572.1 3593135 3594814 D KEGG: psl:Psta_2756 ABC transporter related protein; PFAM: ABC transporter-like; xenobiotic-transporting ATPase 3593135..3594814 Methylomonas methanica MC09 10673261 YP_004514131.1 CDS Metme_3260 NC_015572.1 3594801 3596153 D PFAM: Secretion protein HlyD; KEGG: lbf:LBF_0197 efflux pump; secretion protein HlyD family protein 3594801..3596153 Methylomonas methanica MC09 10673262 YP_004514132.1 CDS Metme_3261 NC_015572.1 3596156 3597580 D KEGG: lbf:LBF_0196 TolC-like outermembrane protein; TolC-like outermembrane protein 3596156..3597580 Methylomonas methanica MC09 10673263 YP_004514133.1 CDS Metme_3262 NC_015572.1 3597595 3598086 D hypothetical protein 3597595..3598086 Methylomonas methanica MC09 10673264 YP_004514134.1 CDS Metme_3263 NC_015572.1 3598209 3599276 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dar:Daro_0230 GGDEF; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 3598209..3599276 Methylomonas methanica MC09 10673265 YP_004514135.1 CDS Metme_3264 NC_015572.1 3599463 3599672 D hypothetical protein 3599463..3599672 Methylomonas methanica MC09 10673266 YP_004514136.1 CDS Metme_3265 NC_015572.1 3599817 3601259 R KEGG: nmu:Nmul_A2728 phosphatase-like; TIGRFAM: PEP-CTERM anchor; PFAM: Protein of unknown function DUF839, bacterial; PEP motif anchor domain-containing protein complement(3599817..3601259) Methylomonas methanica MC09 10673267 YP_004514137.1 CDS Metme_3266 NC_015572.1 3601670 3601858 D hypothetical protein 3601670..3601858 Methylomonas methanica MC09 10673268 YP_004514138.1 CDS Metme_3267 NC_015572.1 3601957 3603486 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N-acetyltransferase; KEGG: tgr:Tgr7_0656 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3601957..3603486) Methylomonas methanica MC09 10673269 YP_004514139.1 CDS Metme_3268 NC_015572.1 3603744 3604349 R PFAM: Methyltransferase type 11; KEGG: bgf:BC1003_1242 methyltransferase type 11; type 11 methyltransferase complement(3603744..3604349) Methylomonas methanica MC09 10673270 YP_004514140.1 CDS Metme_3269 NC_015572.1 3604598 3606115 D KEGG: azo:azo3855 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; alkaline phosphatase 3604598..3606115 Methylomonas methanica MC09 10673271 YP_004514141.1 CDS Metme_3270 NC_015572.1 3606161 3606895 D KEGG: avn:Avin_33810 hypothetical protein; hypothetical protein 3606161..3606895 Methylomonas methanica MC09 10673272 YP_004514142.1 CDS Metme_3271 NC_015572.1 3606927 3607670 R KEGG: rmr:Rmar_0079 hypothetical protein; hypothetical protein complement(3606927..3607670) Methylomonas methanica MC09 10673273 YP_004514143.1 CDS Metme_3272 NC_015572.1 3607989 3608360 R KEGG: pyo:PY04960 hypothetical protein; hypothetical protein complement(3607989..3608360) Methylomonas methanica MC09 10673274 YP_004514144.1 CDS Metme_3273 NC_015572.1 3608401 3608889 R KEGG: nmu:Nmul_A1980 hypothetical protein; hypothetical protein complement(3608401..3608889) Methylomonas methanica MC09 10673275 YP_004514145.1 CDS Metme_3274 NC_015572.1 3608967 3609755 D KEGG: tbd:Tbd_2354 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 3608967..3609755 Methylomonas methanica MC09 10673276 YP_004514146.1 CDS Metme_3275 NC_015572.1 3609752 3611059 D KEGG: tbd:Tbd_2353 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; integral membrane sensor signal transduction histidine kinase 3609752..3611059 Methylomonas methanica MC09 10673277 YP_004514147.1 CDS Metme_3276 NC_015572.1 3611071 3612030 R PFAM: GCN5-related N-acetyltransferase; KEGG: sml:Smlt3196 acetyltransferase; N-acetyltransferase GCN5 complement(3611071..3612030) Methylomonas methanica MC09 10673278 YP_004514148.1 CDS Metme_3277 NC_015572.1 3612077 3613228 R KEGG: tmz:Tmz1t_0130 glutaredoxin; glutaredoxin complement(3612077..3613228) Methylomonas methanica MC09 10673279 YP_004514149.1 CDS Metme_3278 NC_015572.1 3613251 3615191 R SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: mca:MCA0851 cell division protein FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; ATP-dependent metalloprotease FtsH complement(3613251..3615191) Methylomonas methanica MC09 10673280 YP_004514150.1 CDS Metme_3279 NC_015572.1 3615260 3615745 R PFAM: Flavin reductase-like, FMN-binding; KEGG: cwo:Cwoe_0945 flavin reductase domain protein FMN-binding protein; flavin reductase domain-containing FMN-binding protein complement(3615260..3615745) Methylomonas methanica MC09 10673281 YP_004514151.1 CDS Metme_3280 NC_015572.1 3615876 3617372 R PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: ilo:IL0822 lysyl-tRNA synthetase; lysyl-tRNA synthetase complement(3615876..3617372) Methylomonas methanica MC09 10673282 YP_004514152.1 CDS Metme_3281 NC_015572.1 3617391 3617804 R KEGG: ava:Ava_2494 hypothetical protein; hypothetical protein complement(3617391..3617804) Methylomonas methanica MC09 10673283 YP_004514153.1 CDS Metme_3282 NC_015572.1 3617801 3617992 R PFAM: Protein of unknown function DUF433; KEGG: ava:Ava_2493 hypothetical protein; hypothetical protein complement(3617801..3617992) Methylomonas methanica MC09 10673284 YP_004514154.1 CDS Metme_3283 NC_015572.1 3618055 3619152 R TIGRFAM: Peptide chain release factor 2; HAMAP: Peptide chain release factor 2, bacterial; KEGG: mca:MCA0302 peptide chain release factor 2, programmed frameshift; PFAM: Class I peptide chain release factor; Peptide chain release factor; peptide chain release factor 2 complement(3618055..3619152) Methylomonas methanica MC09 10673285 YP_004514155.1 CDS Metme_3284 NC_015572.1 3619222 3620010 R TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: sua:Saut_1548 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(3619222..3620010) Methylomonas methanica MC09 10673286 YP_004514156.1 CDS Metme_3285 NC_015572.1 3620349 3620888 R KEGG: nhl:Nhal_1454 outer membrane lipoprotein Slp; TIGRFAM: Outer membrane lipoprotein Slp; PFAM: Outer membrane lipoprotein Slp; outer membrane lipoprotein, Slp family complement(3620349..3620888) Methylomonas methanica MC09 10673287 YP_004514157.1 CDS Metme_3287 NC_015572.1 3621413 3623179 R PFAM: Protein of unknown function DUF262; KEGG: rlt:Rleg2_2200 protein of unknown function DUF262; hypothetical protein complement(3621413..3623179) Methylomonas methanica MC09 10673289 YP_004514158.1 CDS Metme_3288 NC_015572.1 3623375 3624250 R KEGG: bbe:BBR47_09910 hypothetical protein; hypothetical protein complement(3623375..3624250) Methylomonas methanica MC09 10673290 YP_004514159.1 CDS Metme_3289 NC_015572.1 3624602 3624982 R KEGG: mca:MCA0675 preprotein translocase, SecG subunit; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG complement(3624602..3624982) Methylomonas methanica MC09 10673292 YP_004514160.1 CDS Metme_3290 NC_015572.1 3625004 3625750 R TIGRFAM: Triosephosphate isomerase; KEGG: mca:MCA0674 triosephosphate isomerase; PFAM: Triosephosphate isomerase; triosephosphate isomerase complement(3625004..3625750) Methylomonas methanica MC09 10673293 YP_004514161.1 CDS Metme_3291 NC_015572.1 3625811 3627145 R TIGRFAM: Phosphoglucosamine mutase; KEGG: mca:MCA1847 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucosamine mutase complement(3625811..3627145) Methylomonas methanica MC09 10673294 YP_004514162.1 CDS Metme_3292 NC_015572.1 3627219 3629135 R SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: mca:MCA1848 cell division protein FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; ATP-dependent metalloprotease FtsH complement(3627219..3629135) Methylomonas methanica MC09 10673295 YP_004514163.1 CDS Metme_3293 NC_015572.1 3629261 3629878 R KEGG: ribosomal RNA methyltransferase RrmJ/FtsJ; HAMAP: Ribosomal RNA large subunit methyltransferase E; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA large subunit methyltransferase E complement(3629261..3629878) Methylomonas methanica MC09 10673296 YP_004514164.1 CDS Metme_3294 NC_015572.1 3629929 3630195 D PFAM: RNA-binding, CRM domain; KEGG: tgr:Tgr7_0979 hypothetical protein; hypothetical protein 3629929..3630195 Methylomonas methanica MC09 10673297 YP_004514165.1 CDS Metme_3295 NC_015572.1 3630238 3630714 R TIGRFAM: Prokaryotic transcription elongation factor GreA; HAMAP: Transcription elongation factor greA; KEGG: tgr:Tgr7_0978 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreA complement(3630238..3630714) Methylomonas methanica MC09 10673298 YP_004514166.1 CDS Metme_3296 NC_015572.1 3630742 3633963 R TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: mca:MCA1852 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; carbamoyl-phosphate synthase large subunit complement(3630742..3633963) Methylomonas methanica MC09 10673299 YP_004514167.1 CDS Metme_3297 NC_015572.1 3633981 3635114 R TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: tau:Tola_1026 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; carbamoyl-phosphate synthase small subunit complement(3633981..3635114) Methylomonas methanica MC09 10673300 YP_004514168.1 CDS Metme_3298 NC_015572.1 3635220 3636029 R PFAM: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: tgr:Tgr7_0974 dihydrodipicolinate reductase; Dihydrodipicolinate reductase complement(3635220..3636029) Methylomonas methanica MC09 10673301 YP_004514169.1 CDS Metme_3299 NC_015572.1 3636033 3637178 R SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: mca:MCA1855 DnaJ protein; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region; molecular chaperone DnaJ complement(3636033..3637178) Methylomonas methanica MC09 10673302 YP_004514170.1 CDS Metme_3300 NC_015572.1 3637337 3639268 R TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: mca:MCA1856 DnaK protein; PFAM: Heat shock protein 70; molecular chaperone DnaK complement(3637337..3639268) Methylomonas methanica MC09 10673303 YP_004514171.1 CDS Metme_3301 NC_015572.1 3639339 3639983 R KEGG: mca:MCA1857 GrpE protein; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; protein grpE complement(3639339..3639983) Methylomonas methanica MC09 10673304 YP_004514172.1 CDS Metme_3302 NC_015572.1 3640036 3641076 R TIGRFAM: Negative regulator of class I heat shock protein; HAMAP: Negative regulator of class I heat shock protein; KEGG: mca:MCA1858 heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; heat-inducible transcription repressor HrcA complement(3640036..3641076) Methylomonas methanica MC09 10673305 YP_004514173.1 CDS Metme_3303 NC_015572.1 3641324 3642451 D KEGG: nhl:Nhal_3127 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase 3641324..3642451 Methylomonas methanica MC09 10673306 YP_004514174.1 CDS Metme_3304 NC_015572.1 3642457 3644046 R KEGG: ttu:TERTU_2563 transcriptional regulatory protein RtcR; PFAM: Regulator of RNA terminal phosphate cyclase; RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core; sigma 54 interacting domain-containing protein complement(3642457..3644046) Methylomonas methanica MC09 10673307 YP_004514175.1 CDS Metme_3305 NC_015572.1 3644223 3645449 D PFAM: Uncharacterised protein family UPF0027; KEGG: ttu:TERTU_2561 RtcB protein; hypothetical protein 3644223..3645449 Methylomonas methanica MC09 10673308 YP_004514176.1 CDS Metme_3306 NC_015572.1 3645436 3646491 D TIGRFAM: RNA 3'-terminal phosphate cyclase, subgroup; KEGG: pmy:Pmen_1191 RNA 3'-terminal-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase-like; RNA 3'-phosphate cyclase 3645436..3646491 Methylomonas methanica MC09 10673309 YP_004514177.1 CDS Metme_3307 NC_015572.1 3646537 3646761 D KEGG: app:CAP2UW1_3147 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02450, tryptophan-rich; PFAM: Conserved hypothetical protein CHP02450, tryptophan-rich; hypothetical protein 3646537..3646761 Methylomonas methanica MC09 10673310 YP_004514178.1 CDS Metme_3308 NC_015572.1 3646796 3646939 R KEGG: mca:MCA1107 cyd operon protein YbgT; TIGRFAM: Cyd operon protein YbgT; PFAM: Membrane bound YbgT-like; cyd operon protein YbgT complement(3646796..3646939) Methylomonas methanica MC09 10673311 YP_004514179.1 CDS Metme_3309 NC_015572.1 3646950 3648089 R KEGG: mca:MCA1106 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(3646950..3648089) Methylomonas methanica MC09 10673312 YP_004514180.1 CDS Metme_3310 NC_015572.1 3648093 3648638 R KEGG: nmu:Nmul_A1680 cytochrome c family protein; cytochrome c family protein complement(3648093..3648638) Methylomonas methanica MC09 10673313 YP_004514181.1 CDS Metme_3311 NC_015572.1 3648654 3650216 R PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: mca:MCA1105 cytochrome d ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(3648654..3650216) Methylomonas methanica MC09 10673314 YP_004514182.1 CDS Metme_3312 NC_015572.1 3650206 3650454 R hypothetical protein complement(3650206..3650454) Methylomonas methanica MC09 10673315 YP_004514183.1 CDS Metme_3313 NC_015572.1 3650525 3651550 R PFAM: Heavy metal transport/detoxification protein; KEGG: mca:MCA0800 hypothetical protein; heavy metal transport/detoxification protein complement(3650525..3651550) Methylomonas methanica MC09 10673316 YP_004514184.1 CDS Metme_3314 NC_015572.1 3651583 3653349 R PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: mca:MCA2011 multicopper oxidase; multicopper oxidase type 3 complement(3651583..3653349) Methylomonas methanica MC09 10673317 YP_004514185.1 CDS Metme_3315 NC_015572.1 3653422 3653859 R KEGG: psa:PST_1042 hypothetical protein; manually curated; PFAM: Phosphate-starvation-inducible E; phosphate-starvation-inducible E complement(3653422..3653859) Methylomonas methanica MC09 10673318 YP_004514186.1 CDS Metme_3316 NC_015572.1 3653849 3654781 R PFAM: Protein of unknown function DUF81; KEGG: ach:Achl_0204 protein of unknown function DUF81; hypothetical protein complement(3653849..3654781) Methylomonas methanica MC09 10673319 YP_004514187.1 CDS Metme_3317 NC_015572.1 3654791 3655489 R KEGG: mca:MCA1103 metallo-beta-lactamase; metallo-beta-lactamase complement(3654791..3655489) Methylomonas methanica MC09 10673320 YP_004514188.1 CDS Metme_3318 NC_015572.1 3655760 3657184 R PFAM: O-antigen ligase-related; KEGG: srm:PSR_61010 pilin glycosylation enzyme; O-antigen polymerase complement(3655760..3657184) Methylomonas methanica MC09 10673321 YP_004514189.1 CDS Metme_3319 NC_015572.1 3657339 3657791 R KEGG: noc:Noc_2540 general secretion pathway protein H; general secretion pathway protein H complement(3657339..3657791) Methylomonas methanica MC09 10673322 YP_004514190.1 CDS Metme_3320 NC_015572.1 3658121 3658474 D KEGG: smd:Smed_3508 arsenate reductase and related; TIGRFAM: Conserved hypothetical protein, ArsC related; PFAM: Arsenate reductase-like; ArsC family protein 3658121..3658474 Methylomonas methanica MC09 10673323 YP_004514191.1 CDS Metme_3321 NC_015572.1 3658471 3659598 D TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; HAMAP: Succinyl-diaminopimelate desuccinylase, proteobacteria; KEGG: mca:MCA1553 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; succinyl-diaminopimelate desuccinylase 3658471..3659598 Methylomonas methanica MC09 10673324 YP_004514192.1 CDS Metme_3322 NC_015572.1 3659649 3660323 R KEGG: nwa:Nwat_0334 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like; DNA repair protein RadC complement(3659649..3660323) Methylomonas methanica MC09 10673325 YP_004514193.1 CDS Metme_3323 NC_015572.1 3660382 3661623 D PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; manually curated; KEGG: tgr:Tgr7_0102 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 3660382..3661623 Methylomonas methanica MC09 10673326 YP_004514194.1 CDS Metme_3324 NC_015572.1 3661595 3662050 D PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: spe:Spro_4844 deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase 3661595..3662050 Methylomonas methanica MC09 10673327 YP_004514195.1 CDS Metme_3325 NC_015572.1 3662071 3664701 D PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: nhl:Nhal_3802 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 3662071..3664701 Methylomonas methanica MC09 10673328 YP_004514196.1 CDS Metme_3326 NC_015572.1 3664714 3665607 D TIGRFAM: Acetylglutamate kinase; KEGG: mca:MCA2781 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; acetylglutamate kinase 3664714..3665607 Methylomonas methanica MC09 10673329 YP_004514197.1 CDS Metme_3327 NC_015572.1 3665593 3666585 R KEGG: mca:MCA2739 hypothetical protein; hypothetical protein complement(3665593..3666585) Methylomonas methanica MC09 10673330 YP_004514198.1 CDS Metme_3328 NC_015572.1 3666598 3667173 R PFAM: Protein of unknown function YGGT; KEGG: mca:MCA1534 YGGT family protein; hypothetical protein complement(3666598..3667173) Methylomonas methanica MC09 10673331 YP_004514199.1 CDS Metme_3329 NC_015572.1 3667173 3668000 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; manually curated; KEGG: mca:MCA1535 pyrroline-5-carboxylate reductase; TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase complement(3667173..3668000) Methylomonas methanica MC09 10673332 YP_004514200.1 CDS Metme_3330 NC_015572.1 3668096 3669628 R KEGG: noc:Noc_3038 virulence factor MviN-like; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; integral membrane protein MviN complement(3668096..3669628) Methylomonas methanica MC09 10673333 YP_004514201.1 CDS Metme_3331 NC_015572.1 3669740 3670003 D TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: mca:MCA2250 30S ribosomal protein S20; PFAM: Ribosomal protein S20; 30S ribosomal protein S20 3669740..3670003 Methylomonas methanica MC09 10673334 YP_004514202.1 CDS Metme_3332 NC_015572.1 3670074 3671408 R PFAM: YkuD domain; Peptidoglycan-binding lysin domain; Sporulation/cell division region, bacteria; KEGG: mca:MCA0412 LysM domain-containing protein; ErfK/YbiS/YcfS/YnhG family protein complement(3670074..3671408) Methylomonas methanica MC09 10673335 YP_004514203.1 CDS Metme_3333 NC_015572.1 3671647 3672738 D PFAM: ATPase-like, ParA/MinD; Protein of unknown function DUF59; KEGG: mmb:Mmol_1525 protein of unknown function DUF59; ParA/MinD-like ATPase 3671647..3672738 Methylomonas methanica MC09 10673336 YP_004514204.1 CDS Metme_3334 NC_015572.1 3673305 3674648 D PFAM: HipA-like, N-terminal; HipA-like, C-terminal; KEGG: gca:Galf_1839 HipA domain-containing protein; HipA domain-containing protein 3673305..3674648 Methylomonas methanica MC09 10673337 YP_004514205.1 CDS Metme_3335 NC_015572.1 3675122 3676243 R SMART: Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase, ProB-related; KEGG: mca:MCA2249 gamma-glutamyl kinase; HAMAP: Glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; glutamate 5-kinase complement(3675122..3676243) Methylomonas methanica MC09 10673338 YP_004514206.1 CDS Metme_3336 NC_015572.1 3676230 3677288 R TIGRFAM: GTP-binding protein Obg/CgtA; Small GTP-binding protein; HAMAP: GTPase obg; KEGG: mca:MCA2248 GTPase ObgE; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTPase obg complement(3676230..3677288) Methylomonas methanica MC09 10673339 YP_004514207.1 CDS Metme_3337 NC_015572.1 3677370 3677627 R TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: pct:PC1_0559 50S ribosomal protein L27; PFAM: Ribosomal protein L27; 50S ribosomal protein L27 complement(3677370..3677627) Methylomonas methanica MC09 10673340 YP_004514208.1 CDS Metme_3338 NC_015572.1 3677645 3677956 R TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: alv:Alvin_2158 50S ribosomal protein L21; PFAM: Ribosomal protein L21; 50S ribosomal protein L21 complement(3677645..3677956) Methylomonas methanica MC09 10673341 YP_004514209.1 CDS Metme_3339 NC_015572.1 3678127 3678699 R hypothetical protein complement(3678127..3678699) Methylomonas methanica MC09 10673342 YP_004514210.1 CDS Metme_3340 NC_015572.1 3678895 3680763 D TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: mca:MCA2710 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; phosphomethylpyrimidine synthase 3678895..3680763 Methylomonas methanica MC09 10673343 YP_004514211.1 CDS Metme_3341 NC_015572.1 3680843 3681244 R KEGG: mca:MCA1489 hypothetical protein; hypothetical protein complement(3680843..3681244) Methylomonas methanica MC09 10673344 YP_004514212.1 CDS Metme_3342 NC_015572.1 3681493 3683508 D PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; HAMAP: Methionyl-tRNA synthetase; KEGG: alv:Alvin_1201 methionyl-tRNA synthetase; methionyl-tRNA synthetase 3681493..3683508 Methylomonas methanica MC09 10673345 YP_004514213.1 CDS Metme_3343 NC_015572.1 3683514 3684077 D KEGG: mmb:Mmol_1955 electron transport complex, RnfABCDGE type, B subunit; TIGRFAM: Electron transport complex, RnfB; PFAM: Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; RnfABCDGE type electron transport complex subunit B 3683514..3684077 Methylomonas methanica MC09 10673346 YP_004514214.1 CDS Metme_3344 NC_015572.1 3684426 3685202 R PFAM: Peptidase M48, Ste24p; KEGG: dvu:DVU3388 lipoprotein; peptidase M48 Ste24p complement(3684426..3685202) Methylomonas methanica MC09 10673348 YP_004514215.1 CDS Metme_3345 NC_015572.1 3685165 3685815 R KEGG: ppd:Ppro_2233 17 kDa surface antigen; hypothetical protein complement(3685165..3685815) Methylomonas methanica MC09 10673349 YP_004514216.1 CDS Metme_3346 NC_015572.1 3685850 3686983 R SMART: von Willebrand factor, type A; KEGG: von Willebrand factor type A; von Willebrand factor A complement(3685850..3686983) Methylomonas methanica MC09 10673350 YP_004514217.1 CDS Metme_3347 NC_015572.1 3687029 3688717 R KEGG: protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; serine/threonine protein kinase complement(3687029..3688717) Methylomonas methanica MC09 10673351 YP_004514218.1 CDS Metme_3348 NC_015572.1 3688714 3690996 R PFAM: ABC transporter-like; Forkhead-associated; ABC-2 type transporter; KEGG: cag:Cagg_0751 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; SMART: ATPase, AAA+ type, core; Forkhead-associated; FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits complement(3688714..3690996) Methylomonas methanica MC09 10673352 YP_004514219.1 CDS Metme_3349 NC_015572.1 3691538 3691849 D hypothetical protein 3691538..3691849 Methylomonas methanica MC09 10673353 YP_004514220.1 CDS Metme_3350 NC_015572.1 3691931 3692068 R hypothetical protein complement(3691931..3692068) Methylomonas methanica MC09 10673354 YP_004514221.1 CDS Metme_3351 NC_015572.1 3692723 3692890 R hypothetical protein complement(3692723..3692890) Methylomonas methanica MC09 10673355 YP_004514222.1 CDS Metme_3352 NC_015572.1 3693110 3693403 D KEGG: dar:Daro_3742 hypothetical protein; hypothetical protein 3693110..3693403 Methylomonas methanica MC09 10673356 YP_004514223.1 CDS Metme_3353 NC_015572.1 3693612 3694118 D PFAM: Domain of unknown function DUF1993; KEGG: cyt:cce_4499 hypothetical protein; hypothetical protein 3693612..3694118 Methylomonas methanica MC09 10673357 YP_004514224.1 CDS Metme_3354 NC_015572.1 3694231 3694566 D KEGG: ppr:PBPRA0857 hypothetical protein; hypothetical protein 3694231..3694566 Methylomonas methanica MC09 10673358 YP_004514225.1 CDS Metme_3355 NC_015572.1 3694639 3694896 R KEGG: hypothetical protein; hypothetical protein complement(3694639..3694896) Methylomonas methanica MC09 10673359 YP_004514226.1 CDS Metme_3356 NC_015572.1 3695493 3695768 D TIGRFAM: Prevent-host-death protein; KEGG: prevent-host-death family protein; prevent-host-death family protein 3695493..3695768 Methylomonas methanica MC09 10673360 YP_004514227.1 CDS Metme_3357 NC_015572.1 3695771 3696187 D TIGRFAM: Protein of unknown function DUF132; KEGG: hypothetical protein; hypothetical protein 3695771..3696187 Methylomonas methanica MC09 10673361 YP_004514228.1 CDS Metme_3358 NC_015572.1 3696235 3700800 D KEGG: eta:ETA_14500 hypothetical protein; hypothetical protein 3696235..3700800 Methylomonas methanica MC09 10673362 YP_004514229.1 CDS Metme_3359 NC_015572.1 3700932 3704027 R KEGG: mca:MCA2164 DNA polymerase III, alpha subunit, PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: DNA polymerase III, alpha subunit; HAMAP: Error-prone DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; error-prone DNA polymerase complement(3700932..3704027) Methylomonas methanica MC09 10673363 YP_004514230.1 CDS Metme_3360 NC_015572.1 3704011 3705498 R KEGG: mca:MCA2165 hypothetical protein; hypothetical protein complement(3704011..3705498) Methylomonas methanica MC09 10673364 YP_004514231.1 CDS Metme_3361 NC_015572.1 3705495 3706118 R KEGG: aeh:Mlg_1095 hypothetical protein; hypothetical protein complement(3705495..3706118) Methylomonas methanica MC09 10673365 YP_004514232.1 CDS Metme_3362 NC_015572.1 3706115 3706825 R TIGRFAM: Peptidase S24, LexA repressor; HAMAP: LexA repressor; KEGG: mca:MCA2167 LexA repressor; PFAM: LexA DNA-binding region; Peptidase S24/S26A/S26B, conserved region; SOS-response transcriptional repressor, LexA complement(3706115..3706825) Methylomonas methanica MC09 10673366 YP_004514233.1 CDS Metme_3363 NC_015572.1 3706916 3708196 D PFAM: Bacterial extracellular solute-binding, family 1; KEGG: nhl:Nhal_1611 extracellular solute-binding protein family 1; ABC transporter substrate-binding protein 3706916..3708196 Methylomonas methanica MC09 10673367 YP_004514234.1 CDS Metme_3364 NC_015572.1 3708193 3709071 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nhl:Nhal_1610 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 3708193..3709071 Methylomonas methanica MC09 10673368 YP_004514235.1 CDS Metme_3365 NC_015572.1 3709068 3709895 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_0280 ABC transporter, inner membrane subunit; ABC transporter permease 3709068..3709895 Methylomonas methanica MC09 10673369 YP_004514236.1 CDS Metme_3366 NC_015572.1 3709906 3711045 D PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: nhl:Nhal_1608 ABC transporter related protein; SMART: ATPase, AAA+ type, core; Glycerol-3-phosphate-transporting ATPase 3709906..3711045 Methylomonas methanica MC09 10673370 YP_004514237.1 CDS Metme_3367 NC_015572.1 3711291 3712748 D hypothetical protein 3711291..3712748 Methylomonas methanica MC09 10673371 YP_004514238.1 CDS Metme_3368 NC_015572.1 3712745 3714697 D PFAM: Transglutaminase-like; KEGG: vha:VIBHAR_02460 hypothetical protein; transglutaminase domain-containing protein 3712745..3714697 Methylomonas methanica MC09 10673372 YP_004514239.1 CDS Metme_3369 NC_015572.1 3714751 3715431 R PFAM: 4'-phosphopantetheinyl transferase; KEGG: mca:MCA1522 4'-phosphopantetheinyltransferase; 4'-phosphopantetheinyl transferase complement(3714751..3715431) Methylomonas methanica MC09 10673373 YP_004514240.1 CDS Metme_3370 NC_015572.1 3716174 3716413 D KEGG: mca:MCA2652 hypothetical protein; TIGRFAM: addiction module antidote protein, CC2985; PFAM: addiction module antidote protein, CC2985; addiction module antidote protein 3716174..3716413 Methylomonas methanica MC09 10673374 YP_004514241.1 CDS Metme_3371 NC_015572.1 3716410 3716742 D PFAM: Plasmid stabilisation system; KEGG: mca:MCA2653 hypothetical protein; plasmid stabilization system 3716410..3716742 Methylomonas methanica MC09 10673375 YP_004514242.1 CDS Metme_3372 NC_015572.1 3717165 3717398 D hypothetical protein 3717165..3717398 Methylomonas methanica MC09 10673376 YP_004514243.1 CDS Metme_3373 NC_015572.1 3717427 3717657 D hypothetical protein 3717427..3717657 Methylomonas methanica MC09 10673377 YP_004514244.1 CDS Metme_3374 NC_015572.1 3717940 3718713 D KEGG: pwa:Pecwa_4331 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein 3717940..3718713 Methylomonas methanica MC09 10673378 YP_004514245.1 CDS Metme_3375 NC_015572.1 3718718 3719461 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: bav:BAV2119 biopolymer transport protein; MotA/TolQ/ExbB proton channel 3718718..3719461 Methylomonas methanica MC09 10673379 YP_004514246.1 CDS Metme_3376 NC_015572.1 3719461 3719886 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A3720 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3719461..3719886 Methylomonas methanica MC09 10673380 YP_004514247.1 CDS Metme_3377 NC_015572.1 3719946 3722861 R PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Thrombospondin, type 3-like repeat; KEGG: bao:BAMF_2243 D-alanyl-D-alanine carboxypeptidase (penicilin binding protein); peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 complement(3719946..3722861) Methylomonas methanica MC09 10673381 YP_004514248.1 CDS Metme_3378 NC_015572.1 3722876 3723451 R PFAM: PEP-CTERM bacterial; hypothetical protein complement(3722876..3723451) Methylomonas methanica MC09 10673382 YP_004514249.1 CDS Metme_3379 NC_015572.1 3723498 3724208 R KEGG: pat:Patl_0760 hypothetical protein; hypothetical protein complement(3723498..3724208) Methylomonas methanica MC09 10673383 YP_004514250.1 CDS Metme_3380 NC_015572.1 3724318 3724836 R hypothetical protein complement(3724318..3724836) Methylomonas methanica MC09 10673384 YP_004514251.1 CDS Metme_3381 NC_015572.1 3725126 3725278 D hypothetical protein 3725126..3725278 Methylomonas methanica MC09 10673385 YP_004514252.1 CDS Metme_3382 NC_015572.1 3725377 3726768 R KEGG: swd:Swoo_2724 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase complement(3725377..3726768) Methylomonas methanica MC09 10673386 YP_004514253.1 CDS Metme_3383 NC_015572.1 3726755 3727264 R hypothetical protein complement(3726755..3727264) Methylomonas methanica MC09 10673387 YP_004514254.1 CDS Metme_3384 NC_015572.1 3727300 3727905 R KEGG: pmy:Pmen_1766 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator complement(3727300..3727905) Methylomonas methanica MC09 10673388 YP_004514255.1 CDS Metme_3385 NC_015572.1 3728435 3728980 D PFAM: TonB-dependent receptor, plug; KEGG: net:Neut_0374 TonB-dependent siderophore receptor; TonB-dependent receptor plug 3728435..3728980 Methylomonas methanica MC09 10673389 YP_004514256.1 CDS Metme_3386 NC_015572.1 3729534 3731468 D KEGG: gca:Galf_1307 multi-sensor hybrid histidine kinase; PFAM: Transcriptional regulator, histidine kinase sensor, N-terminal; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; histidine kinase 3729534..3731468 Methylomonas methanica MC09 10673390 YP_004514257.1 CDS Metme_3387 NC_015572.1 3731465 3733303 D TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver region; PAS fold-3; Transcription regulator LuxR, C-terminal; KEGG: cyj:Cyan7822_6043 multi-sensor signal transduction histidine kinase; SMART: Signal transduction response regulator, receiver region; PAS; PAC motif; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 3731465..3733303 Methylomonas methanica MC09 10673391 YP_004514258.1 CDS Metme_3388 NC_015572.1 3733738 3735018 D KEGG: saz:Sama_3598 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer 3733738..3735018 Methylomonas methanica MC09 10673392 YP_004514259.1 CDS Metme_3389 NC_015572.1 3735252 3736286 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: rpc:RPC_2834 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 3735252..3736286 Methylomonas methanica MC09 10673393 YP_004514260.1 CDS Metme_3390 NC_015572.1 3736699 3738879 D KEGG: bgf:BC1003_0036 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; TonB-dependent siderophore receptor 3736699..3738879 Methylomonas methanica MC09 10673394 YP_004514261.1 CDS Metme_3391 NC_015572.1 3738973 3739683 D PFAM: PepSY-associated TM helix; KEGG: nmu:Nmul_A2392 PepSY-associated TM helix; PepSY-associated TM helix domain-containing protein 3738973..3739683 Methylomonas methanica MC09 10673395 YP_004514262.1 CDS Metme_3392 NC_015572.1 3739687 3740373 D HAMAP: PKHD-type hydroxylase ybiX; PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: sku:Sulku_0850 2og-fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; PKHD-type hydroxylase ybiX 3739687..3740373 Methylomonas methanica MC09 10673396 YP_004514263.1 CDS Metme_3393 NC_015572.1 3740822 3742690 D PFAM: IucA/IucC; KEGG: dze:Dd1591_2674 IucA/IucC family protein; IucA/IucC family protein 3740822..3742690 Methylomonas methanica MC09 10673397 YP_004514264.1 CDS Metme_3394 NC_015572.1 3742687 3743835 D PFAM: Major facilitator superfamily MFS-1; KEGG: pol:Bpro_4784 major facilitator transporter; major facilitator superfamily protein 3742687..3743835 Methylomonas methanica MC09 10673398 YP_004514265.1 CDS Metme_3395 NC_015572.1 3743914 3745743 D PFAM: IucA/IucC; KEGG: tbd:Tbd_0718 iron transporter; IucA/IucC family protein 3743914..3745743 Methylomonas methanica MC09 10673399 YP_004514266.1 CDS Metme_3396 NC_015572.1 3745740 3746969 D KEGG: tbd:Tbd_0717 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 3745740..3746969 Methylomonas methanica MC09 10673400 YP_004514267.1 CDS Metme_3397 NC_015572.1 3747014 3749089 D KEGG: mep:MPQ_2521 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; TonB-dependent siderophore receptor 3747014..3749089 Methylomonas methanica MC09 10673401 YP_004514268.1 CDS Metme_3398 NC_015572.1 3749575 3750885 D PFAM: Di-haem cytochrome c peroxidase; KEGG: neu:NE2137 methylamine utilization protein MauG precursor; Di-heme cytochrome c peroxidase 3749575..3750885 Methylomonas methanica MC09 10673402 YP_004514269.1 CDS Metme_3399 NC_015572.1 3750945 3752255 R KEGG: cja:CJA_2554 ATPase, AAA family domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; ATPase AAA complement(3750945..3752255) Methylomonas methanica MC09 10673403 YP_004514270.1 CDS Metme_3400 NC_015572.1 3752337 3753311 D PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: mca:MCA1804 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 3752337..3753311 Methylomonas methanica MC09 10673404 YP_004514271.1 CDS Metme_3401 NC_015572.1 3753539 3754243 D KEGG: aav:Aave_0248 hypothetical protein; hypothetical protein 3753539..3754243 Methylomonas methanica MC09 10673405 YP_004514272.1 CDS Metme_3402 NC_015572.1 3754254 3754721 D KEGG: aav:Aave_0249 hypothetical protein; hypothetical protein 3754254..3754721 Methylomonas methanica MC09 10673406 YP_004514273.1 CDS Metme_3403 NC_015572.1 3754823 3756151 D TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: nhl:Nhal_2676 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop; Lysidine-tRNA(Ile) synthetase, substrate-binding domain; tRNA(Ile)-lysidine synthase 3754823..3756151 Methylomonas methanica MC09 10673407 YP_004514274.1 CDS Metme_3404 NC_015572.1 3756185 3756367 D hypothetical protein 3756185..3756367 Methylomonas methanica MC09 10673408 YP_004514275.1 CDS Metme_3405 NC_015572.1 3756370 3756567 D KEGG: dbr:Deba_2969 hypothetical protein; hypothetical protein 3756370..3756567 Methylomonas methanica MC09 10673409 YP_004514276.1 CDS Metme_3406 NC_015572.1 3756564 3758036 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; PAS fold; KEGG: mep:MPQ_1551 diguanylate cyclase with pas/pac sensor; SMART: Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase 3756564..3758036 Methylomonas methanica MC09 10673410 YP_004514277.1 CDS Metme_3407 NC_015572.1 3758178 3759812 D PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: mca:MCA2513 CTP synthetase; CTP synthase 3758178..3759812 Methylomonas methanica MC09 10673411 YP_004514278.1 CDS Metme_3408 NC_015572.1 3759809 3760642 D PFAM: DAHP synthetase I/KDSA; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; KEGG: tgr:Tgr7_1183 2-dehydro-3-deoxyphosphooctonate aldolase; 2-dehydro-3-deoxyphosphooctonate aldolase 3759809..3760642 Methylomonas methanica MC09 10673412 YP_004514279.1 CDS Metme_3409 NC_015572.1 3760673 3761956 D PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: mca:MCA2515 enolase; enolase 3760673..3761956 Methylomonas methanica MC09 10673413 YP_004514280.1 CDS Metme_3410 NC_015572.1 3762060 3762329 D KEGG: ppw:PputW619_4062 septum formation initiator; manually curated; PFAM: Septum formation initiator; septum formation initiator 3762060..3762329 Methylomonas methanica MC09 10673414 YP_004514281.1 CDS Metme_3411 NC_015572.1 3762339 3762749 D hypothetical protein 3762339..3762749 Methylomonas methanica MC09 10673415 YP_004514282.1 CDS Metme_3412 NC_015572.1 3762827 3763531 D TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: mca:MCA2517 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3762827..3763531 Methylomonas methanica MC09 10673416 YP_004514283.1 CDS Metme_3413 NC_015572.1 3763528 3764001 D TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: psa:PST_1566 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3763528..3764001 Methylomonas methanica MC09 10673417 YP_004514284.1 CDS Metme_3414 NC_015572.1 3764110 3765141 D TIGRFAM: Pseudouridine synthase, TruD; HAMAP: tRNA pseudouridine synthase D; KEGG: tgr:Tgr7_1411 tRNA pseudouridine synthase D TruD; PFAM: Pseudouridine synthase, TruD; tRNA pseudouridine synthase D 3764110..3765141 Methylomonas methanica MC09 10673418 YP_004514285.1 CDS Metme_3416 NC_015572.1 3765439 3766098 R KEGG: etr:ETAE_1603 hypothetical protein; hypothetical protein complement(3765439..3766098) Methylomonas methanica MC09 10673420 YP_004514286.1 CDS Metme_3417 NC_015572.1 3766816 3769509 R KEGG: hch:HCH_05823 anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; BFD-like [2Fe-2S]-binding region; nitrate reductase complement(3766816..3769509) Methylomonas methanica MC09 10673421 YP_004514287.1 CDS Metme_3418 NC_015572.1 3769679 3770938 R KEGG: mca:MCA0592 nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite reductase (NAD(P)H) complement(3769679..3770938) Methylomonas methanica MC09 10673422 YP_004514288.1 CDS Metme_3419 NC_015572.1 3770932 3771372 R PFAM: Cyanate lyase, C-terminal; TIGRFAM: Cyanase; HAMAP: Cyanate hydratase; KEGG: mar:MAE_10370 cyanate hydratase; cyanate hydratase complement(3770932..3771372) Methylomonas methanica MC09 10673423 YP_004514289.1 CDS Metme_3420 NC_015572.1 3771458 3772717 R KEGG: rmr:Rmar_1225 hypothetical protein; hypothetical protein complement(3771458..3772717) Methylomonas methanica MC09 10673424 YP_004514290.1 CDS Metme_3421 NC_015572.1 3772777 3774537 R SMART: ATPase, AAA+ type, core; TIGRFAM: Nitrate transport ATP-binding subunit C/D; KEGG: sde:Sde_2266 regulatory proteins, AsnC/Lrp; PFAM: ABC transporter-like; nitrate ABC transporter ATPases C and D complement(3772777..3774537) Methylomonas methanica MC09 10673425 YP_004514291.1 CDS Metme_3422 NC_015572.1 3774547 3775560 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ttu:TERTU_1088 nitrate transporter, permease; ABC transporter permease complement(3774547..3775560) Methylomonas methanica MC09 10673426 YP_004514292.1 CDS Metme_3423 NC_015572.1 3775692 3777092 R KEGG: hch:HCH_06708 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(3775692..3777092) Methylomonas methanica MC09 10673427 YP_004514293.1 CDS Metme_3424 NC_015572.1 3777680 3781480 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: cvi:CV_1190 sensor/response regulator hybrid; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase 3777680..3781480 Methylomonas methanica MC09 10673428 YP_004514294.1 CDS Metme_3425 NC_015572.1 3781483 3782460 D KEGG: cvi:CV_1189 two-component system; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 3781483..3782460 Methylomonas methanica MC09 10673429 YP_004514295.1 CDS Metme_3426 NC_015572.1 3782585 3783768 D KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein join(3782585..3782848,3782848..3783768) Methylomonas methanica MC09 10673430 YP_004514296.1 CDS Metme_3427 NC_015572.1 3783714 3784715 R KEGG: tbd:Tbd_1967 hypothetical protein; hypothetical protein complement(3783714..3784715) Methylomonas methanica MC09 10673431 YP_004514297.1 CDS Metme_3428 NC_015572.1 3784931 3785155 R hypothetical protein complement(3784931..3785155) Methylomonas methanica MC09 10673432 YP_004514298.1 CDS Metme_3429 NC_015572.1 3785428 3786291 R KEGG: tbd:Tbd_1967 hypothetical protein; hypothetical protein complement(3785428..3786291) Methylomonas methanica MC09 10673433 YP_004514299.1 CDS Metme_3430 NC_015572.1 3786401 3787717 R PFAM: RNA-directed DNA polymerase (reverse transcriptase); KEGG: swo:Swol_2463 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase complement(3786401..3787717) Methylomonas methanica MC09 10673434 YP_004514300.1 CDS Metme_3432 NC_015572.1 3788672 3788950 R hypothetical protein complement(3788672..3788950) Methylomonas methanica MC09 10673436 YP_004514301.1 CDS Metme_3433 NC_015572.1 3788964 3793448 R KEGG: see:SNSL254_p_0173 rhs family protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: RHS protein; YD repeat; RHS repeat-associated core domain-containing protein complement(3788964..3793448) Methylomonas methanica MC09 10673437 YP_004514302.1 CDS Metme_3434 NC_015572.1 3794421 3795002 R PFAM: ANTAR; Signal transduction response regulator, receiver region; KEGG: hel:HELO_3232 K07183 response regulator NasT; response regulator receiver and ANTAR domain-containing protein complement(3794421..3795002) Methylomonas methanica MC09 10673438 YP_004514303.1 CDS Metme_3435 NC_015572.1 3795005 3796483 R PFAM: Major facilitator superfamily MFS-1; KEGG: cps:CPS_4950 nitrate permease; major facilitator superfamily protein complement(3795005..3796483) Methylomonas methanica MC09 10673439 YP_004514304.1 CDS Metme_3436 NC_015572.1 3796898 3799438 D TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG: ttu:TERTU_2948 nitrite reductase [NAD(P)H], large subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; nitrite reductase (NAD(P)H) large subunit 3796898..3799438 Methylomonas methanica MC09 10673440 YP_004514305.1 CDS Metme_3437 NC_015572.1 3799440 3799772 D KEGG: mfa:Mfla_0318 nitrite reductase (NAD(P)H) large subunit, NirD; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; nitrite reductase (NAD(P)H) small subunit 3799440..3799772 Methylomonas methanica MC09 10673441 YP_004514306.1 CDS Metme_3438 NC_015572.1 3799776 3800693 D KEGG: cyc:PCC7424_0708 phenazine biosynthesis protein PhzF family; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family 3799776..3800693 Methylomonas methanica MC09 10673442 YP_004514307.1 CDS Metme_3439 NC_015572.1 3800885 3802150 R KEGG: cak:Caul_3146 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; serine-type D-Ala-D-Ala carboxypeptidase complement(3800885..3802150) Methylomonas methanica MC09 10673443 YP_004514308.1 CDS Metme_3440 NC_015572.1 3802197 3803240 R KEGG: pna:Pnap_4859 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter complement(3802197..3803240) Methylomonas methanica MC09 10673444 YP_004514309.1 CDS Metme_3441 NC_015572.1 3803482 3805086 R TIGRFAM: Type VI secretion system-associated, BMAA0400; PFAM: Type VI secretion system-associated, BMAA0400; Protein phosphatase 2C, N-terminal; KEGG: cja:CJA_1952 serine/threonine protein phosphatase; SMART: Protein phosphatase 2C-related; Ser/Thr phosphatase complement(3803482..3805086) Methylomonas methanica MC09 10673445 YP_004514310.1 CDS Metme_3442 NC_015572.1 3805083 3808628 R KEGG: azo:azo3890 ImcF-like protein; TIGRFAM: Type VI secretion system, IcmF; PFAM: ImcF-related; Protein of unknown function DUF1215; type VI secretion protein IcmF complement(3805083..3808628) Methylomonas methanica MC09 10673446 YP_004514311.1 CDS Metme_3443 NC_015572.1 3808637 3810025 R KEGG: pap:PSPA7_0149 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; Type VI secretion system, OmpA/MotB; PFAM: Type IV / VI secretion system, DotU; Outer membrane protein, OmpA/MotB, C-terminal; DotU family type IV/VI secretion system protein complement(3808637..3810025) Methylomonas methanica MC09 10673447 YP_004514312.1 CDS Metme_3444 NC_015572.1 3810031 3811371 R KEGG: azl:AZL_017770 hypothetical protein; TIGRFAM: Protein of unknown function DUF876, bacterial; PFAM: Protein of unknown function DUF876, bacterial; type VI secretion protein complement(3810031..3811371) Methylomonas methanica MC09 10673448 YP_004514313.1 CDS Metme_3445 NC_015572.1 3811407 3812900 R TIGRFAM: Type VI secretion system, FHA domain-containing; PFAM: Forkhead-associated; KEGG: pap:PSPA7_0152 hypothetical protein; SMART: Forkhead-associated; FHA domain-containing protein complement(3811407..3812900) Methylomonas methanica MC09 10673449 YP_004514314.1 CDS Metme_3446 NC_015572.1 3812936 3815212 R KEGG: nhl:Nhal_1728 peptidase C14 caspase catalytic subunit P20; PFAM: Peptidase C14, caspase catalytic; Sel1-like; SMART: Sel1-like; peptidase C14 caspase catalytic subunit p20 complement(3812936..3815212) Methylomonas methanica MC09 10673450 YP_004514315.1 CDS Metme_3447 NC_015572.1 3815288 3816091 R KEGG: nhl:Nhal_0827 hypothetical protein; hypothetical protein complement(3815288..3816091) Methylomonas methanica MC09 10673451 YP_004514316.1 CDS Metme_3448 NC_015572.1 3816088 3816561 R TIGRFAM: Type VI secretion system, lipoprotein VCA0113; KEGG: vap:Vapar_0552 type VI secretion lipoprotein, VC_A0113 family; type VI secretion lipoprotein complement(3816088..3816561) Methylomonas methanica MC09 10673452 YP_004514317.1 CDS Metme_3449 NC_015572.1 3816804 3818528 D KEGG: bph:Bphy_3843 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; serine/threonine protein kinase 3816804..3818528 Methylomonas methanica MC09 10673453 YP_004514318.1 CDS Metme_3450 NC_015572.1 3818623 3819873 D KEGG: nhl:Nhal_0830 outer membrane autotransporter barrel domain protein; TIGRFAM: Outer membrane autotransporter barrel; PFAM: Autotransporter beta-domain; outer membrane autotransporter barrel domain-containing protein 3818623..3819873 Methylomonas methanica MC09 10673454 YP_004514319.1 CDS Metme_3451 NC_015572.1 3819930 3820763 R KEGG: bba:Bd1395 nucleic acid binding protein; nucleic acid binding protein complement(3819930..3820763) Methylomonas methanica MC09 10673455 YP_004514320.1 CDS Metme_3452 NC_015572.1 3820885 3822774 R SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA topoisomerase IV, subunit B, Gram-negative; KEGG: pmy:Pmen_0604 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; DNA topoisomerase, type IIA, subunit B, C-terminal; DNA topoisomerase IV subunit B complement(3820885..3822774) Methylomonas methanica MC09 10673456 YP_004514321.1 CDS Metme_3454 NC_015572.1 3823227 3823484 R KEGG: pcu:pc0990 hypothetical protein; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin complement(3823227..3823484) Methylomonas methanica MC09 10673458 YP_004514322.1 CDS Metme_3455 NC_015572.1 3823468 3823653 R KEGG: nwa:Nwat_2561 hypothetical protein; hypothetical protein complement(3823468..3823653) Methylomonas methanica MC09 10673459 YP_004514323.1 CDS Metme_3456 NC_015572.1 3823796 3824026 R KEGG: pap:PSPA7_3980 hypothetical protein; hypothetical protein complement(3823796..3824026) Methylomonas methanica MC09 10673460 YP_004514324.1 CDS Metme_3457 NC_015572.1 3824035 3824514 R KEGG: pap:PSPA7_3979 hypothetical protein; hypothetical protein complement(3824035..3824514) Methylomonas methanica MC09 10673461 YP_004514325.1 CDS Metme_3458 NC_015572.1 3824791 3825570 D PFAM: NERD; DNA topoisomerase, type IA, zn finger; KEGG: sat:SYN_02043 hypothetical protein; NERD domain-containing protein 3824791..3825570 Methylomonas methanica MC09 10673462 YP_004514326.1 CDS Metme_3459 NC_015572.1 3825634 3826548 R KEGG: abo:ABO_2713 hypothetical protein; hypothetical protein complement(3825634..3826548) Methylomonas methanica MC09 10673463 YP_004514327.1 CDS Metme_3460 NC_015572.1 3826604 3826978 R manually curated; KEGG: pmy:Pmen_2122 hypothetical protein; hypothetical protein complement(3826604..3826978) Methylomonas methanica MC09 10673464 YP_004514328.1 CDS Metme_3462 NC_015572.1 3827563 3827760 D hypothetical protein 3827563..3827760 Methylomonas methanica MC09 10673466 YP_004514329.1 CDS Metme_3463 NC_015572.1 3827750 3828007 D manually curated; TIGRFAM: Addiction module toxin, RelE/StbE; KEGG: alv:Alvin_1697 RelE/StbE family addiction module toxin; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin 3827750..3828007 Methylomonas methanica MC09 10673467 YP_004514330.1 CDS Metme_3464 NC_015572.1 3828350 3828562 D hypothetical protein 3828350..3828562 Methylomonas methanica MC09 10673468 YP_004514331.1 CDS Metme_3465 NC_015572.1 3828552 3828815 D KEGG: bhy:BHWA1_02010 RelE, cytotoxic translational repressor of toxin-antitoxin stability system; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin 3828552..3828815 Methylomonas methanica MC09 10673469 YP_004514332.1 CDS Metme_3466 NC_015572.1 3829044 3829238 D TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: mca:MCA0819 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; exodeoxyribonuclease 7 small subunit 3829044..3829238 Methylomonas methanica MC09 10673470 YP_004514333.1 CDS Metme_3467 NC_015572.1 3829231 3830124 D KEGG: mca:MCA0818 geranyltranstransferase; PFAM: Polyprenyl synthetase; geranyltranstransferase 3829231..3830124 Methylomonas methanica MC09 10673471 YP_004514334.1 CDS Metme_3468 NC_015572.1 3830177 3832039 D PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: mca:MCA0817 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 3830177..3832039 Methylomonas methanica MC09 10673472 YP_004514335.1 CDS Metme_3469 NC_015572.1 3832117 3832632 D TIGRFAM: Adenine phosphoribosyl transferase; HAMAP: Adenine phosphoribosyl transferase; KEGG: nhl:Nhal_2625 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; adenine phosphoribosyltransferase 3832117..3832632 Methylomonas methanica MC09 10673473 YP_004514336.1 CDS Metme_3470 NC_015572.1 3832743 3833744 R KEGG: nhl:Nhal_0340 VacJ family lipoprotein; manually curated; PFAM: VacJ-like lipoprotein; VacJ family lipoprotein complement(3832743..3833744) Methylomonas methanica MC09 10673474 YP_004514337.1 CDS Metme_3471 NC_015572.1 3833767 3834378 R KEGG: mca:MCA0806 hypothetical protein; TIGRFAM: Hopanoid biosynthesis-associated membrane protein HpnM; PFAM: Toluene tolerance; hopanoid biosynthesis associated membrane protein HpnM complement(3833767..3834378) Methylomonas methanica MC09 10673475 YP_004514338.1 CDS Metme_3472 NC_015572.1 3834423 3835523 R KEGG: nmu:Nmul_A2560 radical SAM family protein; TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM; hopanoid biosynthesis associated radical SAM protein HpnH complement(3834423..3835523) Methylomonas methanica MC09 10673476 YP_004514339.1 CDS Metme_3473 NC_015572.1 3835955 3837046 D PFAM: Squalene/phytoene synthase; KEGG: mca:MCA0813 squalene synthase; squalene/phytoene synthase 3835955..3837046 Methylomonas methanica MC09 10673477 YP_004514340.1 CDS Metme_3474 NC_015572.1 3837056 3839017 D TIGRFAM: Hopene cyclase; Squalene cyclase; KEGG: mca:MCA0812 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 3837056..3839017 Methylomonas methanica MC09 10673478 YP_004514341.1 CDS Metme_3475 NC_015572.1 3839014 3839775 D KEGG: noc:Noc_1319 purine phosphorylase 1; TIGRFAM: Hopanoid-associated phosphorylase HpnG; PFAM: Nucleoside phosphorylase; hopanoid-associated phosphorylase 3839014..3839775 Methylomonas methanica MC09 10673479 YP_004514342.1 CDS Metme_3476 NC_015572.1 3839860 3841245 D KEGG: mca:MCA0809 acetylornithine aminotransferase, PFAM: Aminotransferase class-III; acetylornithine transaminase 3839860..3841245 Methylomonas methanica MC09 10673480 YP_004514343.1 CDS Metme_3477 NC_015572.1 3841258 3841617 D KEGG: mca:MCA0808 hypothetical protein; hypothetical protein 3841258..3841617 Methylomonas methanica MC09 10673481 YP_004514344.1 CDS Metme_3478 NC_015572.1 3841623 3843254 D PFAM: Copper resistance D; KEGG: mca:MCA0807 copper resistance protein; copper resistance D domain-containing protein 3841623..3843254 Methylomonas methanica MC09 10673482 YP_004514345.1 CDS Metme_3479 NC_015572.1 3843257 3845119 D PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: mca:MCA0817 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 3843257..3845119 Methylomonas methanica MC09 10673483 YP_004514346.1 CDS Metme_3480 NC_015572.1 3845194 3846276 D PFAM: Acyltransferase 3; KEGG: pbr:PB2503_06782 acyltransferase 3 family protein; acyltransferase 3845194..3846276 Methylomonas methanica MC09 10673484 YP_004514347.1 CDS Metme_3481 NC_015572.1 3846276 3846968 D KEGG: ppm:PPSC2_c0818 lipolytic protein g-D-S-l family; G-D-S-L family lipolytic protein 3846276..3846968 Methylomonas methanica MC09 10673485 YP_004514348.1 CDS Metme_3482 NC_015572.1 3847216 3847983 D KEGG: mca:MCA0343 metallo-beta-lactamase; TIGRFAM: Hydroxyacylglutathione hydrolase; HAMAP: Hydroxyacylglutathione hydrolase; Hydroxyacylglutathione hydrolase 3847216..3847983 Methylomonas methanica MC09 10673486 YP_004514349.1 CDS Metme_3483 NC_015572.1 3847984 3849120 R HAMAP: rRNA (guanine-N2-)-methyltransferase, RsmD; KEGG: sma:SAV_1444 ribosomal RNA small subunit methyltransferase; PFAM: Methyltransferase small; Ribosomal RNA large subunit methyltransferase G complement(3847984..3849120) Methylomonas methanica MC09 10673487 YP_004514350.1 CDS Metme_3484 NC_015572.1 3849301 3850074 R KEGG: mca:MCA1993 TatD family deoxyribonuclease; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related; TatD family hydrolase complement(3849301..3850074) Methylomonas methanica MC09 10673488 YP_004514351.1 CDS Metme_3485 NC_015572.1 3850129 3850479 R PFAM: Type IV pilus assembly PilZ; KEGG: pag:PLES_21031 type 4 fimbrial biogenesis protein PilZ; type IV pilus assembly PilZ complement(3850129..3850479) Methylomonas methanica MC09 10673489 YP_004514352.1 CDS Metme_3486 NC_015572.1 3850484 3851482 R KEGG: mca:MCA1995 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' complement(3850484..3851482) Methylomonas methanica MC09 10673490 YP_004514353.1 CDS Metme_3487 NC_015572.1 3851479 3852102 R PFAM: Thymidylate kinase-like; TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: tgr:Tgr7_1829 dTMP kinase; thymidylate kinase complement(3851479..3852102) Methylomonas methanica MC09 10673491 YP_004514354.1 CDS Metme_3488 NC_015572.1 3852099 3853088 R KEGG: psa:PST_2618 hypothetical protein; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like; aminodeoxychorismate lyase complement(3852099..3853088) Methylomonas methanica MC09 10673492 YP_004514355.1 CDS Metme_3489 NC_015572.1 3853085 3853912 R TIGRFAM: Aminodeoxychorismate lyase, class IV; KEGG: noc:Noc_1662 aminotransferase, class IV; PFAM: Aminotransferase, class IV; aminodeoxychorismate lyase complement(3853085..3853912) Methylomonas methanica MC09 10673493 YP_004514356.1 CDS Metme_3490 NC_015572.1 3853939 3855183 R TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: mca:MCA1999 3-oxoacyl-(acyl-carrier-protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-oxoacyl-ACP synthase complement(3853939..3855183) Methylomonas methanica MC09 10673494 YP_004514357.1 CDS Metme_3491 NC_015572.1 3855272 3855505 R TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: cja:CJA_1677 acyl carrier protein; PFAM: Phosphopantetheine-binding; acyl carrier protein complement(3855272..3855505) Methylomonas methanica MC09 10673495 YP_004514358.1 CDS Metme_3492 NC_015572.1 3855678 3856613 R KEGG: aeh:Mlg_0758 hypothetical protein; hypothetical protein complement(3855678..3856613) Methylomonas methanica MC09 10673496 YP_004514359.1 CDS Metme_3493 NC_015572.1 3856783 3858039 R PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: nhl:Nhal_2108 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(3856783..3858039) Methylomonas methanica MC09 10673497 YP_004514360.1 CDS Metme_3494 NC_015572.1 3858209 3858856 R PFAM: Uracil-DNA glycosylase-like; KEGG: mca:MCA3092 uracil-DNA glycosylase; uracil-DNA glycosylase complement(3858209..3858856) Methylomonas methanica MC09 10673498 YP_004514361.1 CDS Metme_3495 NC_015572.1 3858947 3862213 R PFAM: Acriflavin resistance protein; KEGG: mca:MCA2152 AcrB/AcrD/AcrF family protein; acriflavin resistance protein complement(3858947..3862213) Methylomonas methanica MC09 10673499 YP_004514362.1 CDS Metme_3496 NC_015572.1 3862210 3863307 R KEGG: mca:MCA2153 HlyD family secretion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(3862210..3863307) Methylomonas methanica MC09 10673500 YP_004514363.1 CDS Metme_3497 NC_015572.1 3863328 3864671 R PFAM: Outer membrane efflux protein; KEGG: mca:MCA2154 outer membrane protein CyaE; outer membrane efflux protein complement(3863328..3864671) Methylomonas methanica MC09 10673501 YP_004514364.1 CDS Metme_3498 NC_015572.1 3864879 3865415 D KEGG: mca:MCA1398 hypothetical protein; hypothetical protein 3864879..3865415 Methylomonas methanica MC09 10673502 YP_004514365.1 CDS Metme_3500 NC_015572.1 3866415 3867008 R PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: pap:PSPA7_2104 glutathione S-transferase; glutathione S-transferase domain-containing protein complement(3866415..3867008) Methylomonas methanica MC09 10673506 YP_004514366.1 CDS Metme_3501 NC_015572.1 3867264 3867938 D PFAM: SNARE associated Golgi protein; KEGG: cni:Calni_0116 SNARE associated golgi protein-related protein; hypothetical protein 3867264..3867938 Methylomonas methanica MC09 10673507 YP_004514367.1 CDS Metme_3502 NC_015572.1 3867952 3868794 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: app:CAP2UW1_1887 endonuclease/exonuclease/phosphatase; hypothetical protein complement(3867952..3868794) Methylomonas methanica MC09 10673508 YP_004514368.1 CDS Metme_3503 NC_015572.1 3868924 3870012 R KEGG: pin:Ping_1776 hypothetical protein; hypothetical protein complement(3868924..3870012) Methylomonas methanica MC09 10673509 YP_004514369.1 CDS Metme_3504 NC_015572.1 3870255 3871814 R PFAM: Protein of unknown function DUF839, bacterial; KEGG: cyc:PCC7424_5068 protein of unknown function DUF839; hypothetical protein complement(3870255..3871814) Methylomonas methanica MC09 10673510 YP_004514370.1 CDS Metme_3505 NC_015572.1 3872256 3872762 D TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: maq:Maqu_0043 peptide deformylase; PFAM: Formylmethionine deformylase; peptide deformylase 3872256..3872762 Methylomonas methanica MC09 10673511 YP_004514371.1 CDS Metme_3506 NC_015572.1 3872771 3873697 D PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: mca:MCA2844 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 3872771..3873697 Methylomonas methanica MC09 10673512 YP_004514372.1 CDS Metme_3507 NC_015572.1 3873694 3874989 D KEGG: mca:MCA2845 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; sun protein 3873694..3874989 Methylomonas methanica MC09 10673513 YP_004514373.1 CDS Metme_3508 NC_015572.1 3874964 3875527 D KEGG: alv:Alvin_2076 hypothetical protein; hypothetical protein 3874964..3875527 Methylomonas methanica MC09 10673514 YP_004514374.1 CDS Metme_3509 NC_015572.1 3875509 3877665 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: mca:MCA2847 nitrogen regulation protein NtrY, SMART: ATP-binding region, ATPase-like; HAMP linker domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; multi-sensor signal transduction histidine kinase 3875509..3877665 Methylomonas methanica MC09 10673515 YP_004514375.1 CDS Metme_3510 NC_015572.1 3877662 3879023 D KEGG: mca:MCA2848 nitrogen regulation protein NtrX, PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator 3877662..3879023 Methylomonas methanica MC09 10673516 YP_004514376.1 CDS Metme_3511 NC_015572.1 3879102 3879530 D KEGG: mca:MCA0904 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13; 50S ribosomal protein L13 3879102..3879530 Methylomonas methanica MC09 10673517 YP_004514377.1 CDS Metme_3512 NC_015572.1 3879543 3879932 D PFAM: Ribosomal protein S9; KEGG: swp:swp_0702 30S ribosomal protein S9; 30S ribosomal protein S9 3879543..3879932 Methylomonas methanica MC09 10673518 YP_004514378.1 CDS Metme_3513 NC_015572.1 3880056 3881879 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: mca:MCA0461 CBS/GGDEF/EAL domain-containing protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase complement(3880056..3881879) Methylomonas methanica MC09 10673519 YP_004514379.1 CDS Metme_3514 NC_015572.1 3881910 3882122 R KEGG: hypothetical protein; hypothetical protein complement(3881910..3882122) Methylomonas methanica MC09 10673520 YP_004514380.1 CDS Metme_3515 NC_015572.1 3882447 3882683 D hypothetical protein 3882447..3882683 Methylomonas methanica MC09 10673521 YP_004514381.1 CDS Metme_3516 NC_015572.1 3882749 3883297 R KEGG: cja:CJA_2749 hypothetical protein; hypothetical protein complement(3882749..3883297) Methylomonas methanica MC09 10673522 YP_004514382.1 CDS Metme_3517 NC_015572.1 3883786 3884754 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kfl:Kfla_6004 endonuclease/exonuclease/phosphatase; hypothetical protein 3883786..3884754 Methylomonas methanica MC09 10673523 YP_004514383.1 CDS Metme_3518 NC_015572.1 3885053 3885229 D hypothetical protein 3885053..3885229 Methylomonas methanica MC09 10673524 YP_004514384.1 CDS Metme_3519 NC_015572.1 3885802 3891096 D TIGRFAM: Amino acid adenylation; KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Condensation domain; amino acid adenylation protein 3885802..3891096 Methylomonas methanica MC09 10673525 YP_004514385.1 CDS Metme_3520 NC_015572.1 3891150 3892760 D PFAM: Protein of unknown function DUF2070, membrane; KEGG: antibiotic biosynthesis protein; hypothetical protein 3891150..3892760 Methylomonas methanica MC09 10673526 YP_004514386.1 CDS Metme_3521 NC_015572.1 3892840 3896142 D TIGRFAM: Amino acid adenylation; KEGG: mar:MAE_60010 McnC protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; amino acid adenylation protein 3892840..3896142 Methylomonas methanica MC09 10673527 YP_004514387.1 CDS Metme_3522 NC_015572.1 3896209 3902772 D TIGRFAM: Amino acid adenylation; KEGG: psb:Psyr_1959 amino acid adenylation; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; amino acid adenylation protein 3896209..3902772 Methylomonas methanica MC09 10673528 YP_004514388.1 CDS Metme_3523 NC_015572.1 3902769 3910631 D TIGRFAM: Amino acid adenylation; Thioester reductase; KEGG: bbt:BBta_6813 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Male sterility, NAD-binding; amino acid adenylation protein 3902769..3910631 Methylomonas methanica MC09 10673529 YP_004514389.1 CDS Metme_3524 NC_015572.1 3910654 3911736 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(3910654..3911736) Methylomonas methanica MC09 10673530 YP_004514390.1 CDS Metme_3525 NC_015572.1 3911733 3912233 R PFAM: Transposase IS3/IS911; KEGG: pna:Pnap_1740 transposase; transposase IS3/IS911 family protein complement(3911733..3912233) Methylomonas methanica MC09 10673531 YP_004514391.1 CDS Metme_3526 NC_015572.1 3912470 3914914 D KEGG: neu:NE0546 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 3912470..3914914 Methylomonas methanica MC09 10673532 YP_004514392.1 CDS Metme_3527 NC_015572.1 3915246 3916136 D KEGG: cyp:PCC8801_2393 hypothetical protein; hypothetical protein 3915246..3916136 Methylomonas methanica MC09 10673533 YP_004514393.1 CDS Metme_3528 NC_015572.1 3916314 3917396 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(3916314..3917396) Methylomonas methanica MC09 10673534 YP_004514394.1 CDS Metme_3529 NC_015572.1 3917393 3917893 R KEGG: pna:Pnap_1740 transposase; transposase complement(3917393..3917893) Methylomonas methanica MC09 10673535 YP_004514395.1 CDS Metme_3530 NC_015572.1 3917988 3919508 D PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region; integrase catalytic subunit 3917988..3919508 Methylomonas methanica MC09 10673536 YP_004514396.1 CDS Metme_3531 NC_015572.1 3919498 3920247 D KEGG: gca:Galf_2409 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 3919498..3920247 Methylomonas methanica MC09 10673537 YP_004514397.1 CDS Metme_3532 NC_015572.1 3920342 3921094 D PFAM: Transposase, IS4-like; KEGG: noc:Noc_0672 transposase IS4; transposase IS4 family protein 3920342..3921094 Methylomonas methanica MC09 10673538 YP_004514398.1 CDS Metme_3533 NC_015572.1 3921463 3921798 R PFAM: MbtH-like protein; KEGG: cyt:cce_3047 MbtH-like protein; balhimycin biosynthetic protein MbtH complement(3921463..3921798) Methylomonas methanica MC09 10673539 YP_004514399.1 CDS Metme_3534 NC_015572.1 3921924 3922436 R KEGG: pfl:PFL_5380 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3921924..3922436) Methylomonas methanica MC09 10673540 YP_004514400.1 CDS Metme_3535 NC_015572.1 3923302 3924984 D SMART: ATPase, AAA+ type, core; TIGRFAM: Cyclic peptide transporter; KEGG: scl:sce8260 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; cyclic peptide transporter 3923302..3924984 Methylomonas methanica MC09 10673541 YP_004514401.1 CDS Metme_3536 NC_015572.1 3925000 3927384 D PFAM: Peptidase S45, penicillin amidase; KEGG: nde:NIDE2155 penicillin amidase; peptidase S45 penicillin amidase 3925000..3927384 Methylomonas methanica MC09 10673542 YP_004514402.1 CDS Metme_3537 NC_015572.1 3927456 3928409 D PFAM: FecR protein; KEGG: pfs:PFLU5799 iron acquisition-like protein; anti-FecI sigma factor FecR 3927456..3928409 Methylomonas methanica MC09 10673543 YP_004514403.1 CDS Metme_3538 NC_015572.1 3928512 3929474 R PFAM: FecR protein; KEGG: neu:NE2139 transmembrane sensor; anti-FecI sigma factor FecR complement(3928512..3929474) Methylomonas methanica MC09 10673544 YP_004514404.1 CDS Metme_3539 NC_015572.1 3929471 3930046 R KEGG: net:Neut_2090 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3929471..3930046) Methylomonas methanica MC09 10673545 YP_004514405.1 CDS Metme_3540 NC_015572.1 3930243 3933713 D KEGG: rba:RB6610 hypothetical protein; hypothetical protein 3930243..3933713 Methylomonas methanica MC09 10673546 YP_004514406.1 CDS Metme_3541 NC_015572.1 3933850 3934254 D TIGRFAM: Haemerythrin-like, metal-binding; KEGG: tte:TTE0259 hemerythrin; hemerythrin-like metal-binding protein 3933850..3934254 Methylomonas methanica MC09 10673547 YP_004514407.1 CDS Metme_3542 NC_015572.1 3934583 3935023 D KEGG: hya:HY04AAS1_0193 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 3934583..3935023 Methylomonas methanica MC09 10673548 YP_004514408.1 CDS Metme_3544 NC_015572.1 3935342 3936934 R SMART: Phospholipase D/Transphosphatidylase; KEGG: app:CAP2UW1_1888 phospholipase D/transphosphatidylase; phospholipase D/Transphosphatidylase complement(3935342..3936934) Methylomonas methanica MC09 10673550 YP_004514409.1 CDS Metme_3545 NC_015572.1 3937565 3939034 R PFAM: Endonuclease/exonuclease/phosphatase; phosphatase regulatory subunit; KEGG: app:CAP2UW1_1887 endonuclease/exonuclease/phosphatase; hypothetical protein complement(3937565..3939034) Methylomonas methanica MC09 10673551 YP_004514410.1 CDS Metme_3546 NC_015572.1 3939045 3940637 R PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, core; KEGG: nhl:Nhal_0096 domain of unknown function DUF1957; hypothetical protein complement(3939045..3940637) Methylomonas methanica MC09 10673552 YP_004514411.1 CDS Metme_3547 NC_015572.1 3940646 3941317 R hypothetical protein complement(3940646..3941317) Methylomonas methanica MC09 10673553 YP_004514412.1 CDS Metme_3548 NC_015572.1 3941502 3943667 D SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Glycogen debranching enzyme GlgX; KEGG: sfu:Sfum_2956 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; glycogen debranching protein GlgX 3941502..3943667 Methylomonas methanica MC09 10673554 YP_004514413.1 CDS Metme_3549 NC_015572.1 3944017 3944343 D KEGG: mno:Mnod_2293 hypothetical protein; hypothetical protein 3944017..3944343 Methylomonas methanica MC09 10673555 YP_004514414.1 CDS Metme_3550 NC_015572.1 3944741 3945673 D KEGG: mms:mma_1786 hypothetical protein; hypothetical protein 3944741..3945673 Methylomonas methanica MC09 10673556 YP_004514415.1 CDS Metme_3551 NC_015572.1 3945782 3946282 R PFAM: Uncharacterised protein family UPF0153; KEGG: dar:Daro_1132 hypothetical protein; hypothetical protein complement(3945782..3946282) Methylomonas methanica MC09 10673557 YP_004514416.1 CDS Metme_3552 NC_015572.1 3946279 3946725 R hypothetical protein complement(3946279..3946725) Methylomonas methanica MC09 10673558 YP_004514417.1 CDS Metme_3553 NC_015572.1 3946850 3948133 R PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; KEGG: cps:CPS_3939 pyridoxamine 5'-phosphate oxidase / oxidoreductase, NAD-dependent; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(3946850..3948133) Methylomonas methanica MC09 10673559 YP_004514418.1 CDS Metme_3554 NC_015572.1 3948259 3948804 R KEGG: cps:CPS_3940 alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; Uncharacterised peroxidase-related; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase complement(3948259..3948804) Methylomonas methanica MC09 10673560 YP_004514419.1 CDS Metme_3555 NC_015572.1 3948941 3949840 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cvi:CV_1773 GstR-like transcriptional regulator protein; LysR family transcriptional regulator 3948941..3949840 Methylomonas methanica MC09 10673561 YP_004514420.1 CDS Metme_3556 NC_015572.1 3950098 3950925 R manually curated; KEGG: mpt:Mpe_A0412 hypothetical protein; hypothetical protein complement(3950098..3950925) Methylomonas methanica MC09 10673562 YP_004514421.1 CDS Metme_3558 NC_015572.1 3951741 3953039 R PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: aca:ACP_3214 group II intron-encoded maturase; RNA-directed DNA polymerase complement(3951741..3953039) Methylomonas methanica MC09 10673564 YP_004514422.1 CDS Metme_3559 NC_015572.1 3954006 3954296 R KEGG: avn:Avin_39840 hypothetical protein; hypothetical protein complement(3954006..3954296) Methylomonas methanica MC09 10673565 YP_004514423.1 CDS Metme_3560 NC_015572.1 3954513 3955652 R KEGG: tau:Tola_0064 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase complement(3954513..3955652) Methylomonas methanica MC09 10673566 YP_004514424.1 CDS Metme_3561 NC_015572.1 3955878 3956732 R KEGG: pag:PLES_51651 serine/threonine protein kinase; PFAM: RIO-like kinase; SMART: RIO kinase; RIO-like kinase complement(3955878..3956732) Methylomonas methanica MC09 10673567 YP_004514425.1 CDS Metme_3562 NC_015572.1 3956919 3957635 D KEGG: maq:Maqu_2154 hypothetical protein; HAMAP: Protein of unknown function DUF28; PFAM: Protein of unknown function DUF28; hypothetical protein 3956919..3957635 Methylomonas methanica MC09 10673568 YP_004514426.1 CDS Metme_3563 NC_015572.1 3958005 3958541 D KEGG: mca:MCA1460 hypothetical protein; hypothetical protein 3958005..3958541 Methylomonas methanica MC09 10673569 YP_004514427.1 CDS Metme_3564 NC_015572.1 3958626 3959369 D PFAM: Protein of unknown function DUF547; KEGG: hch:HCH_01043 hypothetical protein; hypothetical protein 3958626..3959369 Methylomonas methanica MC09 10673570 YP_004514428.1 CDS Metme_3565 NC_015572.1 3959411 3959842 D PFAM: Polyketide cyclase/dehydrase; KEGG: nmu:Nmul_A1581 hypothetical protein; polyketide cyclase/dehydrase 3959411..3959842 Methylomonas methanica MC09 10673571 YP_004514429.1 CDS Metme_3566 NC_015572.1 3959839 3960225 D KEGG: nhl:Nhal_2945 hypothetical protein; hypothetical protein 3959839..3960225 Methylomonas methanica MC09 10673572 YP_004514430.1 CDS Metme_3567 NC_015572.1 3960409 3962556 D KEGG: app:CAP2UW1_2826 SNARE associated Golgi protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SNARE associated Golgi protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Dihydrolipoyl dehydrogenase 3960409..3962556 Methylomonas methanica MC09 10673573 YP_004514431.1 CDS Metme_3568 NC_015572.1 3962560 3963243 D PFAM: Glycosyl transferase, family 2; KEGG: app:CAP2UW1_2822 glycosyl transferase 2; family 2 glycosyl transferase 3962560..3963243 Methylomonas methanica MC09 10673574 YP_004514432.1 CDS Metme_3569 NC_015572.1 3963243 3964034 D PFAM: Fatty acid hydroxylase; KEGG: hel:HELO_3308 sterol desaturase; fatty acid hydroxylase 3963243..3964034 Methylomonas methanica MC09 10673575 YP_004514433.1 CDS Metme_3570 NC_015572.1 3964038 3964658 D PFAM: Protein of unknown function DUF2064; KEGG: nhl:Nhal_0868 hypothetical protein; hypothetical protein 3964038..3964658 Methylomonas methanica MC09 10673576 YP_004514434.1 CDS Metme_3571 NC_015572.1 3964683 3965552 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gca:Galf_1932 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(3964683..3965552) Methylomonas methanica MC09 10673577 YP_004514435.1 CDS Metme_3572 NC_015572.1 3965641 3965862 R PFAM: 4-oxalocrotonate tautomerase; KEGG: sal:Sala_2693 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(3965641..3965862) Methylomonas methanica MC09 10673578 YP_004514436.1 CDS Metme_3573 NC_015572.1 3966022 3966603 R KEGG: gca:Galf_1931 carboxymuconolactone decarboxylase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase complement(3966022..3966603) Methylomonas methanica MC09 10673579 YP_004514437.1 CDS Metme_3574 NC_015572.1 3966787 3967677 D KEGG: xce:Xcel_1435 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3966787..3967677 Methylomonas methanica MC09 10673580 YP_004514438.1 CDS Metme_3575 NC_015572.1 3967739 3968740 R KEGG: mca:MCA0345 cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase complement(3967739..3968740) Methylomonas methanica MC09 10673581 YP_004514439.1 CDS Metme_3576 NC_015572.1 3968989 3969327 D KEGG: nde:NIDE3219 metal-binding protein SmbP; metal-binding protein SmbP 3968989..3969327 Methylomonas methanica MC09 10673582 YP_004514440.1 CDS Metme_3577 NC_015572.1 3969405 3970835 R KEGG: nhl:Nhal_3135 sigma-54 factor interaction domain-containing protein; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator complement(3969405..3970835) Methylomonas methanica MC09 10673583 YP_004514441.1 CDS Metme_3578 NC_015572.1 3970828 3972288 R KEGG: nhl:Nhal_3134 ATP-binding region ATPase domain protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase complement(3970828..3972288) Methylomonas methanica MC09 10673584 YP_004514442.1 CDS Metme_3579 NC_015572.1 3972674 3973426 D hypothetical protein 3972674..3973426 Methylomonas methanica MC09 10673585 YP_004514443.1 CDS Metme_3580 NC_015572.1 3973484 3973876 R PFAM: Cupin 2, conserved barrel; KEGG: mca:MCA0909 hypothetical protein; cupin complement(3973484..3973876) Methylomonas methanica MC09 10673586 YP_004514444.1 CDS Metme_3581 NC_015572.1 3974103 3974579 R KEGG: mca:MCA1925 hypothetical protein; hypothetical protein complement(3974103..3974579) Methylomonas methanica MC09 10673587 YP_004514445.1 CDS Metme_3582 NC_015572.1 3975088 3975363 R hypothetical protein complement(3975088..3975363) Methylomonas methanica MC09 10673588 YP_004514446.1 CDS Metme_3583 NC_015572.1 3976029 3976715 R PFAM: SNARE associated Golgi protein; KEGG: cyc:PCC7424_2229 SNARE associated Golgi protein; hypothetical protein complement(3976029..3976715) Methylomonas methanica MC09 10673589 YP_004514447.1 CDS Metme_3584 NC_015572.1 3976885 3977394 D KEGG: ant:Arnit_0636 hypothetical protein; hypothetical protein 3976885..3977394 Methylomonas methanica MC09 10673590 YP_004514448.1 CDS Metme_3585 NC_015572.1 3977595 3978251 R KEGG: scl:sce4731 hypothetical protein; hypothetical protein complement(3977595..3978251) Methylomonas methanica MC09 10673591 YP_004514449.1 CDS Metme_3586 NC_015572.1 3978346 3980850 R TIGRFAM: ATPase, P-type, plasma-membrane proton-efflux; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: hna:Hneap_0971 plasma-membrane proton-efflux P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; plasma-membrane proton-efflux P-type ATPase complement(3978346..3980850) Methylomonas methanica MC09 10673592 YP_004514450.1 CDS Metme_3587 NC_015572.1 3981044 3982000 R KEGG: mea:Mex_2p0918 hypothetical protein; hypothetical protein complement(3981044..3982000) Methylomonas methanica MC09 10673593 YP_004514451.1 CDS Metme_3588 NC_015572.1 3982388 3982957 R KEGG: noc:Noc_2187 hypothetical protein; hypothetical protein complement(3982388..3982957) Methylomonas methanica MC09 10673594 YP_004514452.1 CDS Metme_3589 NC_015572.1 3983283 3984614 R PFAM: Chloride channel, voltage gated; KEGG: mca:MCA2509 chloride channel protein; Cl- channel voltage-gated family protein complement(3983283..3984614) Methylomonas methanica MC09 10673595 YP_004514453.1 CDS Metme_3590 NC_015572.1 3984693 3985334 R PFAM: Toluene tolerance; KEGG: mca:MCA2792 hypothetical protein; toluene tolerance family protein complement(3984693..3985334) Methylomonas methanica MC09 10673596 YP_004514454.1 CDS Metme_3591 NC_015572.1 3985514 3985699 R hypothetical protein complement(3985514..3985699) Methylomonas methanica MC09 10673597 YP_004514455.1 CDS Metme_3592 NC_015572.1 3985968 3987596 R PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: xau:Xaut_4170 sulphate transporter; sulfate transporter complement(3985968..3987596) Methylomonas methanica MC09 10673598 YP_004514456.1 CDS Metme_3593 NC_015572.1 3988085 3989815 R KEGG: aeh:Mlg_1763 hypothetical protein; hypothetical protein complement(3988085..3989815) Methylomonas methanica MC09 10673599 YP_004514457.1 CDS Metme_3594 NC_015572.1 3990077 3991054 D PFAM: ABC transporter-like; KEGG: xca:xccb100_3846 ABC-type transporter of unknown specificity,ATPase subunit; SMART: ATPase, AAA+ type, core; polyamine-transporting ATPase 3990077..3991054 Methylomonas methanica MC09 10673600 YP_004514458.1 CDS Metme_3595 NC_015572.1 3991051 3991812 D PFAM: ABC-2 type transporter; KEGG: hoh:Hoch_3138 ABC-2 type transporter; ABC transporter 3991051..3991812 Methylomonas methanica MC09 10673601 YP_004514459.1 CDS Metme_3596 NC_015572.1 3991832 3992227 R PFAM: PilT protein, N-terminal; KEGG: glo:Glov_2132 PilT protein domain protein; twitching motility protein PilT complement(3991832..3992227) Methylomonas methanica MC09 10673602 YP_004514460.1 CDS Metme_3597 NC_015572.1 3992214 3992492 R KEGG: ara:Arad_2862 hypothetical protein; TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted; AbrB family transcriptional regulator complement(3992214..3992492) Methylomonas methanica MC09 10673603 YP_004514461.1 CDS Metme_3598 NC_015572.1 3992788 3993198 R KEGG: dar:Daro_3431 hypothetical protein; hypothetical protein complement(3992788..3993198) Methylomonas methanica MC09 10673604 YP_004514462.1 CDS Metme_3599 NC_015572.1 3993551 3995665 D PFAM: Acyltransferase 3; KEGG: xfa:XF0778 O-antigen acetylase; acyltransferase 3993551..3995665 Methylomonas methanica MC09 10673605 YP_004514463.1 CDS Metme_3601 NC_015572.1 3996390 3997688 R PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: aca:ACP_3214 group II intron-encoded maturase; RNA-directed DNA polymerase complement(3996390..3997688) Methylomonas methanica MC09 10673607 YP_004514464.1 CDS Metme_3602 NC_015572.1 3998419 3999678 R KEGG: gbm:Gbem_3671 glucose/galactose transporter; TIGRFAM: Bacterial glucose/galactose transporter; PFAM: Major facilitator superfamily MFS-1; glucose/galactose transporter complement(3998419..3999678) Methylomonas methanica MC09 10673608 YP_004514465.1 CDS Metme_3603 NC_015572.1 3999692 4001941 R manually curated; KEGG: fjo:Fjoh_1564 glycoside hydrolase 3 protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; Beta-glucosidase complement(3999692..4001941) Methylomonas methanica MC09 10673609 YP_004514466.1 CDS Metme_3604 NC_015572.1 4002068 4007272 R KEGG: npu:Npun_F5648 LamG domain-containing protein; hypothetical protein complement(4002068..4007272) Methylomonas methanica MC09 10673610 YP_004514467.1 CDS Metme_3605 NC_015572.1 4007269 4009308 R hypothetical protein complement(4007269..4009308) Methylomonas methanica MC09 10673611 YP_004514468.1 CDS Metme_3607 NC_015572.1 4010002 4010451 D hypothetical protein 4010002..4010451 Methylomonas methanica MC09 10673613 YP_004514469.1 CDS Metme_3608 NC_015572.1 4010423 4010896 R KEGG: pph:Ppha_2791 hypothetical protein; hypothetical protein complement(4010423..4010896) Methylomonas methanica MC09 10673614 YP_004514470.1 CDS Metme_3609 NC_015572.1 4010889 4012034 R KEGG: bpd:BURPS668_3906 hypothetical protein; PFAM: Protein of unknown function DUF955; SMART: Helix-turn-helix type 3; hypothetical protein complement(4010889..4012034) Methylomonas methanica MC09 10673615 YP_004514471.1 CDS Metme_3611 NC_015572.1 4012514 4013584 D KEGG: bpt:Bpet3736 transposase; transposase 4012514..4013584 Methylomonas methanica MC09 10673617 YP_004514472.1 CDS Metme_3612 NC_015572.1 4013688 4014080 D hypothetical protein 4013688..4014080 Methylomonas methanica MC09 10673618 YP_004514473.1 CDS Metme_3613 NC_015572.1 4014133 4014723 D KEGG: slo:Shew_0485 cold-shock DNA-binding domain-containing protein; PFAM: Excalibur calcium-binding domain; Cold-shock protein, DNA-binding; SMART: Cold shock protein; excalibur domain-containing protein 4014133..4014723 Methylomonas methanica MC09 10673619 YP_004514474.1 CDS Metme_3614 NC_015572.1 4014933 4015649 D KEGG: xac:XAC0053 methyltransferase; methyltransferase 4014933..4015649 Methylomonas methanica MC09 10673620 YP_004514475.1 CDS Metme_3615 NC_015572.1 4015886 4017157 D KEGG: ppd:Ppro_0062 hypothetical protein; hypothetical protein 4015886..4017157 Methylomonas methanica MC09 10673621 YP_004514476.1 CDS Metme_3616 NC_015572.1 4017151 4018581 R KEGG: gca:Galf_1292 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; UDP-phosphate glucose phosphotransferase complement(4017151..4018581) Methylomonas methanica MC09 10673622 YP_004514477.1 CDS Metme_3617 NC_015572.1 4018571 4019347 R KEGG: xac:XAC0046 UDP-N-acetyl-D-mannosamine transferase; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; PFAM: Glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(4018571..4019347) Methylomonas methanica MC09 10673623 YP_004514478.1 CDS Metme_3618 NC_015572.1 4019344 4020426 R PFAM: Glycosyl transferase, group 1; KEGG: xac:XAC0047 galactosyltransferase; group 1 glycosyl transferase complement(4019344..4020426) Methylomonas methanica MC09 10673624 YP_004514479.1 CDS Metme_3619 NC_015572.1 4020591 4021883 R KEGG: xac:XAC0048 hypothetical protein; hypothetical protein complement(4020591..4021883) Methylomonas methanica MC09 10673625 YP_004514480.1 CDS Metme_3620 NC_015572.1 4021940 4022149 R hypothetical protein complement(4021940..4022149) Methylomonas methanica MC09 10673626 YP_004514481.1 CDS Metme_3621 NC_015572.1 4022483 4022794 D KEGG: rru:Rru_A0822 hypothetical protein; hypothetical protein 4022483..4022794 Methylomonas methanica MC09 10673627 YP_004514482.1 CDS Metme_3622 NC_015572.1 4022806 4023771 D KEGG: xac:XAC0062 hypothetical protein; hypothetical protein 4022806..4023771 Methylomonas methanica MC09 10673628 YP_004514483.1 CDS Metme_3623 NC_015572.1 4023768 4024601 D PFAM: Sulfotransferase; KEGG: gca:Galf_0827 sulfotransferase; sulfotransferase 4023768..4024601 Methylomonas methanica MC09 10673629 YP_004514484.1 CDS Metme_3624 NC_015572.1 4024763 4025302 D PFAM: Phage Tail Collar; KEGG: gur:Gura_1349 phage tail collar domain-containing protein; Tail Collar domain-containing protein 4024763..4025302 Methylomonas methanica MC09 10673630 YP_004514485.1 CDS Metme_3625 NC_015572.1 4025325 4025864 D PFAM: Phage Tail Collar; KEGG: xop:PXO_03558 microcystin dependent protein; Tail Collar domain-containing protein 4025325..4025864 Methylomonas methanica MC09 10673631 YP_004514486.1 CDS Metme_3626 NC_015572.1 4025877 4026440 D PFAM: Phage Tail Collar; KEGG: xac:XAC0065 microcystin dependent protein; Tail Collar domain-containing protein 4025877..4026440 Methylomonas methanica MC09 10673632 YP_004514487.1 CDS Metme_3627 NC_015572.1 4026510 4026677 R hypothetical protein complement(4026510..4026677) Methylomonas methanica MC09 10673633 YP_004514488.1 CDS Metme_3628 NC_015572.1 4026743 4028668 R PFAM: Asparagine synthase; KEGG: rru:Rru_A0855 asparagine synthase; asparagine synthase complement(4026743..4028668) Methylomonas methanica MC09 10673634 YP_004514489.1 CDS Metme_3629 NC_015572.1 4028665 4029423 R KEGG: mag:amb1464 hypothetical protein; manually curated; PFAM: Methyltransferase type 12; type 12 methyltransferase complement(4028665..4029423) Methylomonas methanica MC09 10673635 YP_004514490.1 CDS Metme_3630 NC_015572.1 4029557 4030054 D KEGG: hch:HCH_06057 acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4029557..4030054 Methylomonas methanica MC09 10673636 YP_004514491.1 CDS Metme_3631 NC_015572.1 4029967 4030191 R hypothetical protein complement(4029967..4030191) Methylomonas methanica MC09 10673637 YP_004514492.1 CDS Metme_3632 NC_015572.1 4030230 4031042 R KEGG: ank:AnaeK_4104 hypothetical protein; hypothetical protein complement(4030230..4031042) Methylomonas methanica MC09 10673638 YP_004514493.1 CDS Metme_3633 NC_015572.1 4031265 4032074 R TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: gme:Gmet_1475 YD repeat-containing protein; RHS repeat-associated core domain-containing protein complement(4031265..4032074) Methylomonas methanica MC09 10673639 YP_004514494.1 CDS Metme_3634 NC_015572.1 4032708 4033451 R TIGRFAM: RHS repeat-associated core domain; KEGG: gme:Gmet_1475 YD repeat-containing protein; RHS repeat-associated core domain-containing protein complement(4032708..4033451) Methylomonas methanica MC09 10673640 YP_004514495.1 CDS Metme_3635 NC_015572.1 4033571 4033891 R hypothetical protein complement(4033571..4033891) Methylomonas methanica MC09 10673641 YP_004514496.1 CDS Metme_3636 NC_015572.1 4033903 4037031 R KEGG: gme:Gmet_1475 YD repeat-containing protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: YD repeat; RHS repeat-associated core domain-containing protein complement(4033903..4037031) Methylomonas methanica MC09 10673642 YP_004514497.1 CDS Metme_3637 NC_015572.1 4037395 4037775 R hypothetical protein complement(4037395..4037775) Methylomonas methanica MC09 10673643 YP_004514498.1 CDS Metme_3638 NC_015572.1 4037785 4043385 R KEGG: gme:Gmet_1475 YD repeat-containing protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: Transglutaminase-like; YD repeat; RHS repeat-associated core domain-containing protein complement(4037785..4043385) Methylomonas methanica MC09 10673644 YP_004514499.1 CDS Metme_3639 NC_015572.1 4043390 4043983 R PFAM: YD repeat; KEGG: cps:CPS_2152 thrombospondin type 3 repeat-/CalX-beta domain-containing protein; hypothetical protein complement(4043390..4043983) Methylomonas methanica MC09 10673645 YP_004514500.1 CDS Metme_3640 NC_015572.1 4044550 4045092 D PFAM: Exosortase EpsH-related; exosortase 4044550..4045092 Methylomonas methanica MC09 10673646 YP_004514501.1 CDS Metme_3641 NC_015572.1 4045089 4045781 D hypothetical protein 4045089..4045781 Methylomonas methanica MC09 10673647 YP_004514502.1 CDS Metme_3642 NC_015572.1 4046260 4048059 D PFAM: ABC transporter-like; KEGG: gca:Galf_0823 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 4046260..4048059 Methylomonas methanica MC09 10673648 YP_004514503.1 CDS Metme_3643 NC_015572.1 4048063 4049304 D PFAM: Polysaccharide biosynthesis protein; KEGG: psp:PSPPH_0823 hypothetical protein; polysaccharide biosynthesis protein 4048063..4049304 Methylomonas methanica MC09 10673649 YP_004514504.1 CDS Metme_3644 NC_015572.1 4049340 4050518 D KEGG: xac:XAC0055 hypothetical protein; hypothetical protein 4049340..4050518 Methylomonas methanica MC09 10673650 YP_004514505.1 CDS Metme_3645 NC_015572.1 4050578 4051720 D PFAM: Glycosyl transferase, group 1; KEGG: xac:XAC0041 mannosyltransferase B; group 1 glycosyl transferase 4050578..4051720 Methylomonas methanica MC09 10673651 YP_004514506.1 CDS Metme_3646 NC_015572.1 4051734 4052855 D PFAM: Glycosyl transferase, group 1; KEGG: pau:PA14_71910 glycosyltransferase WbpZ; group 1 glycosyl transferase 4051734..4052855 Methylomonas methanica MC09 10673652 YP_004514507.1 CDS Metme_3647 NC_015572.1 4052862 4053953 D TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: xac:XAC0044 lipopolysaccharide biosynthesis protein; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 4052862..4053953 Methylomonas methanica MC09 10673653 YP_004514508.1 CDS Metme_3648 NC_015572.1 4053957 4055252 D PFAM: O-antigen ligase-related; KEGG: xac:XAC0045 hypothetical protein; O-antigen polymerase 4053957..4055252 Methylomonas methanica MC09 10673654 YP_004514509.1 CDS Metme_3649 NC_015572.1 4055290 4056240 D KEGG: xac:XAC0054 degenerated UDP-glucose epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 4055290..4056240 Methylomonas methanica MC09 10673655 YP_004514510.1 CDS Metme_3650 NC_015572.1 4056437 4057135 D PFAM: Methyltransferase type 11; KEGG: gsu:GSU3022 hypothetical protein; type 11 methyltransferase 4056437..4057135 Methylomonas methanica MC09 10673656 YP_004514511.1 CDS Metme_3651 NC_015572.1 4057132 4058622 D KEGG: xac:XAC0052 hypothetical protein; hypothetical protein 4057132..4058622 Methylomonas methanica MC09 10673657 YP_004514512.1 CDS Metme_3652 NC_015572.1 4058622 4060505 D TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: xac:XAC0051 asparagine synthase; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; asparagine synthase 4058622..4060505 Methylomonas methanica MC09 10673658 YP_004514513.1 CDS Metme_3653 NC_015572.1 4060502 4061494 D PFAM: Methyltransferase type 11; KEGG: xac:XAC0050 hypothetical protein; type 11 methyltransferase 4060502..4061494 Methylomonas methanica MC09 10673659 YP_004514514.1 CDS Metme_3654 NC_015572.1 4061491 4062795 D KEGG: xac:XAC0049 hypothetical protein; hypothetical protein 4061491..4062795 Methylomonas methanica MC09 10673660 YP_004514515.1 CDS Metme_3655 NC_015572.1 4063150 4064244 R hypothetical protein complement(4063150..4064244) Methylomonas methanica MC09 10673661 YP_004514516.1 CDS Metme_3656 NC_015572.1 4064370 4066196 R KEGG: rpa:RPA0819 hypothetical protein; hypothetical protein complement(4064370..4066196) Methylomonas methanica MC09 10673662 YP_004514517.1 CDS Metme_3657 NC_015572.1 4066707 4066997 R KEGG: bwe:BcerKBAB4_3384 hypothetical protein; hypothetical protein complement(4066707..4066997) Methylomonas methanica MC09 10673663 YP_004514518.1 CDS Metme_3658 NC_015572.1 4067168 4068046 R PFAM: Sulfotransferase; KEGG: gca:Galf_0827 sulfotransferase; sulfotransferase complement(4067168..4068046) Methylomonas methanica MC09 10673664 YP_004514519.1 CDS Metme_3659 NC_015572.1 4068051 4068950 R KEGG: gca:Galf_0826 HPr serine kinase domain-containing protein; HPr serine kinase domain-containing protein complement(4068051..4068950) Methylomonas methanica MC09 10673665 YP_004514520.1 CDS Metme_3660 NC_015572.1 4068957 4069733 R PFAM: Sulfotransferase; KEGG: rru:Rru_A1463 sulfotransferase; sulfotransferase complement(4068957..4069733) Methylomonas methanica MC09 10673666 YP_004514521.1 CDS Metme_3661 NC_015572.1 4069889 4070167 R KEGG: pmf:P9303_27021 hypothetical protein; hypothetical protein complement(4069889..4070167) Methylomonas methanica MC09 10673667 YP_004514522.1 CDS Metme_3662 NC_015572.1 4070253 4071053 R KEGG: rru:Rru_A3022 hypothetical protein; hypothetical protein complement(4070253..4071053) Methylomonas methanica MC09 10673668 YP_004514523.1 CDS Metme_3663 NC_015572.1 4071063 4071971 R PFAM: Cupin 4; KEGG: rru:Rru_A0823 cupin region; cupin complement(4071063..4071971) Methylomonas methanica MC09 10673669 YP_004514524.1 CDS Metme_3664 NC_015572.1 4072276 4073190 R KEGG: rru:Rru_A1478 HPr(Ser) kinase/phosphatase; HPr(Ser) kinase/phosphatase complement(4072276..4073190) Methylomonas methanica MC09 10673670 YP_004514525.1 CDS Metme_3665 NC_015572.1 4073204 4073848 R SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: rru:Rru_A3024 prolyl 4-hydroxylase, alpha subunit; prolyl 4-hydroxylase subunit alpha complement(4073204..4073848) Methylomonas methanica MC09 10673671 YP_004514526.1 CDS Metme_3666 NC_015572.1 4073940 4075889 R PFAM: Asparagine synthase; KEGG: xac:XAC0059 asparagine synthetase like protein; asparagine synthase complement(4073940..4075889) Methylomonas methanica MC09 10673672 YP_004514527.1 CDS Metme_3667 NC_015572.1 4075919 4076104 R hypothetical protein complement(4075919..4076104) Methylomonas methanica MC09 10673673 YP_004514528.1 CDS Metme_3668 NC_015572.1 4076577 4077209 D KEGG: swd:Swoo_1994 hypothetical protein; hypothetical protein 4076577..4077209 Methylomonas methanica MC09 10673674 YP_004514529.1 CDS Metme_3669 NC_015572.1 4077206 4079728 D PFAM: Ribulose-phosphate 3-epimerase; KEGG: cdl:CDR20291_2461 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 4077206..4079728 Methylomonas methanica MC09 10673675 YP_004514530.1 CDS Metme_3670 NC_015572.1 4079728 4081233 D KEGG: hba:Hbal_3213 hypothetical protein; hypothetical protein 4079728..4081233 Methylomonas methanica MC09 10673676 YP_004514531.1 CDS Metme_3671 NC_015572.1 4081230 4081949 D PFAM: Glycosyl transferase, family 2; KEGG: psl:Psta_4574 glycosyl transferase 2; family 2 glycosyl transferase 4081230..4081949 Methylomonas methanica MC09 10673677 YP_004514532.1 CDS Metme_3672 NC_015572.1 4082302 4083900 D KEGG: dal:Dalk_2391 hypothetical protein; hypothetical protein 4082302..4083900 Methylomonas methanica MC09 10673678 YP_004514533.1 CDS Metme_3673 NC_015572.1 4084032 4085099 D PFAM: Integrase, catalytic core; KEGG: azl:AZL_b03960 transposase; integrase catalytic subunit 4084032..4085099 Methylomonas methanica MC09 10673679 YP_004514534.1 CDS Metme_3674 NC_015572.1 4085232 4085831 D hypothetical protein 4085232..4085831 Methylomonas methanica MC09 10673680 YP_004514535.1 CDS Metme_3675 NC_015572.1 4085906 4087726 R hypothetical protein complement(4085906..4087726) Methylomonas methanica MC09 10673681 YP_004514536.1 CDS Metme_3676 NC_015572.1 4088155 4088430 D KEGG: pla:Plav_1654 hypothetical protein; hypothetical protein 4088155..4088430 Methylomonas methanica MC09 10673682 YP_004514537.1 CDS Metme_3677 NC_015572.1 4088440 4089552 D KEGG: pla:Plav_1656 hypothetical protein; hypothetical protein 4088440..4089552 Methylomonas methanica MC09 10673683 YP_004514538.1 CDS Metme_3678 NC_015572.1 4089619 4091265 D PFAM: Sulfotransferase; KEGG: slo:Shew_2702 hypothetical protein; sulfotransferase 4089619..4091265 Methylomonas methanica MC09 10673684 YP_004514539.1 CDS Metme_3679 NC_015572.1 4091262 4092677 D KEGG: pmb:A9601_17341 hypothetical protein; hypothetical protein 4091262..4092677 Methylomonas methanica MC09 10673685 YP_004514540.1 CDS Metme_3680 NC_015572.1 4092717 4093409 D KEGG: hch:HCH_06059 hypothetical protein; hypothetical protein 4092717..4093409 Methylomonas methanica MC09 10673686 YP_004514541.1 CDS Metme_3682 NC_015572.1 4093865 4094389 R KEGG: gca:Galf_0830 hypothetical protein; hypothetical protein complement(4093865..4094389) Methylomonas methanica MC09 10673688 YP_004514542.1 CDS Metme_3683 NC_015572.1 4094877 4096625 R PFAM: Cobalt chelatase, CobT subunit; KEGG: acr:Acry_1711 cobalt chelatase, pCobT subunit; SMART: von Willebrand factor, type A; cobaltochelatase complement(4094877..4096625) Methylomonas methanica MC09 10673689 YP_004514543.1 CDS Metme_3684 NC_015572.1 4096609 4097568 R KEGG: rha:RHA1_ro03584 cobaltochelatase; PFAM: ATPase associated with various cellular activities, AAA-5; cobaltochelatase complement(4096609..4097568) Methylomonas methanica MC09 10673690 YP_004514544.1 CDS Metme_3685 NC_015572.1 4098513 4099094 R KEGG: syg:sync_2436 hypothetical protein; hypothetical protein complement(4098513..4099094) Methylomonas methanica MC09 10673691 YP_004514545.1 CDS Metme_3686 NC_015572.1 4099329 4099613 D PFAM: Protein of unknown function DUF159; KEGG: dar:Daro_2685 hypothetical protein; hypothetical protein 4099329..4099613 Methylomonas methanica MC09 10673692 YP_004514546.1 CDS Metme_3687 NC_015572.1 4099619 4100698 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRB1144 transposase; integrase catalytic subunit complement(4099619..4100698) Methylomonas methanica MC09 10673693 YP_004514547.1 CDS Metme_3688 NC_015572.1 4100695 4101195 R PFAM: Transposase IS3/IS911; KEGG: pna:Pnap_1740 transposase; transposase IS3/IS911 family protein complement(4100695..4101195) Methylomonas methanica MC09 10673694 YP_004514548.1 CDS Metme_3690 NC_015572.1 4101487 4102089 R PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: meh:M301_2687 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4101487..4102089) Methylomonas methanica MC09 10673696 YP_004514549.1 CDS Metme_3692 NC_015572.1 4103152 4103631 D KEGG: bbt:BBta_5144 hypothetical protein; hypothetical protein 4103152..4103631 Methylomonas methanica MC09 10673698 YP_004514550.1 CDS Metme_3693 NC_015572.1 4103768 4105174 D KEGG: bge:BC1002_4059 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase 4103768..4105174 Methylomonas methanica MC09 10673699 YP_004514551.1 CDS Metme_3694 NC_015572.1 4105375 4106163 D PFAM: Alpha/beta hydrolase fold-1; KEGG: afw:Anae109_1019 hypothetical protein; alpha/beta hydrolase 4105375..4106163 Methylomonas methanica MC09 10673700 YP_004514552.1 CDS Metme_3695 NC_015572.1 4106597 4107163 R hypothetical protein complement(4106597..4107163) Methylomonas methanica MC09 10673701 YP_004514553.1 CDS Metme_3696 NC_015572.1 4107308 4108306 D manually curated; PFAM: ThiJ/PfpI; Helix-turn-helix, AraC type; KEGG: AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4107308..4108306 Methylomonas methanica MC09 10673702 YP_004514554.1 CDS Metme_3697 NC_015572.1 4108383 4108736 R hypothetical protein complement(4108383..4108736) Methylomonas methanica MC09 10673703 YP_004514555.1 CDS Metme_3698 NC_015572.1 4108752 4109876 R PFAM: Fatty acid desaturase, type 1; KEGG: mxa:MXAN_3390 fatty acid desaturase; fatty acid desaturase complement(4108752..4109876) Methylomonas methanica MC09 10673704 YP_004514556.1 CDS Metme_3699 NC_015572.1 4110328 4110519 R TIGRFAM: Carbon storage regulator; HAMAP: Carbon storage regulator; KEGG: mca:MCA0391 carbon storage regulator; PFAM: Carbon storage regulator; carbon storage regulator CsrA complement(4110328..4110519) Methylomonas methanica MC09 10673708 YP_004514557.1 CDS Metme_3700 NC_015572.1 4110677 4111585 D KEGG: son:SO_2590 ribosomal biogenesis GTPase; TIGRFAM: GTP-binding protein, ribosome biogenesis, YlqF; PFAM: GTP-binding protein, HSR1-related; ribosome biogenesis GTP-binding protein YlqF 4110677..4111585 Methylomonas methanica MC09 10673709 YP_004514558.1 CDS Metme_3701 NC_015572.1 4111586 4112683 R PFAM: Quinolinate synthetase A; TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A; KEGG: mca:MCA0376 quinolinate synthetase; quinolinate synthase A complement(4111586..4112683) Methylomonas methanica MC09 10673710 YP_004514559.1 CDS Metme_3702 NC_015572.1 4112745 4113293 R KEGG: noc:Noc_1094 hypothetical protein; hypothetical protein complement(4112745..4113293) Methylomonas methanica MC09 10673711 YP_004514560.1 CDS Metme_3703 NC_015572.1 4113428 4115218 R TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: mca:MCA1776 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; aspartyl-tRNA synthetase complement(4113428..4115218) Methylomonas methanica MC09 10673712 YP_004514561.1 CDS Metme_3704 NC_015572.1 4115288 4115554 R KEGG: cja:CJA_1026 hypothetical protein; TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB; FmdB family regulatory protein complement(4115288..4115554) Methylomonas methanica MC09 10673713 YP_004514562.1 CDS Metme_3705 NC_015572.1 4115633 4116712 D TIGRFAM: Dihydroorotase homodimeric type; KEGG: slt:Slit_2960 dihydroorotase, homodimeric type; PFAM: Amidohydrolase 1; dihydroorotase, homodimeric type 4115633..4116712 Methylomonas methanica MC09 10673714 YP_004514563.1 CDS Metme_3706 NC_015572.1 4116983 4118560 D KEGG: tbd:Tbd_1534 glycosyltransferase; glycosyltransferase 4116983..4118560 Methylomonas methanica MC09 10673715 YP_004514564.1 CDS Metme_3707 NC_015572.1 4118635 4119354 D PFAM: Glycosyl transferase, family 2; KEGG: mca:MCA0374 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 4118635..4119354 Methylomonas methanica MC09 10673716 YP_004514565.1 CDS Metme_3708 NC_015572.1 4119354 4119638 D PFAM: Lipid A biosynthesis, N-terminal; KEGG: sno:Snov_3026 lipid A biosynthesis domain protein; lipid A biosynthesis domain-containing protein 4119354..4119638 Methylomonas methanica MC09 10673717 YP_004514566.1 CDS Metme_3709 NC_015572.1 4119986 4120345 D KEGG: rpi:Rpic_0247 proline-rich transmembrane protein; proline-rich transmembrane protein 4119986..4120345 Methylomonas methanica MC09 10673718 YP_004514567.1 CDS Metme_3710 NC_015572.1 4120470 4120964 D hypothetical protein 4120470..4120964 Methylomonas methanica MC09 10673719 YP_004514568.1 CDS Metme_3711 NC_015572.1 4120927 4122321 R PFAM: Fumarate lyase; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: maq:Maqu_0490 argininosuccinate lyase; argininosuccinate lyase complement(4120927..4122321) Methylomonas methanica MC09 10673720 YP_004514569.1 CDS Metme_3712 NC_015572.1 4122521 4123837 D TIGRFAM: Amino-acid N-acetyltransferase (ArgA); KEGG: mca:MCA2084 N-acetylglutamate synthase; PFAM: Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; amino-acid N-acetyltransferase 4122521..4123837 Methylomonas methanica MC09 10673721 YP_004514570.1 CDS Metme_3713 NC_015572.1 4123889 4124677 D PFAM: Metallophosphoesterase; Calcineurin-like phosphoesterase C-terminal; KEGG: aha:AHA_3763 Icc protein; metallophosphoesterase 4123889..4124677 Methylomonas methanica MC09 10673722 YP_004514571.1 CDS Metme_3714 NC_015572.1 4124674 4125312 R KEGG: mca:MCA2086 dinucleoside polyphosphate hydrolase; HAMAP: RNA pyrophosphohydrolase; PFAM: NUDIX hydrolase domain; RNA pyrophosphohydrolase complement(4124674..4125312) Methylomonas methanica MC09 10673723 YP_004514572.1 CDS Metme_3715 NC_015572.1 4125349 4126002 D TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: mca:MCA2087 HAD family hydrolase; HAD-superfamily hydrolase 4125349..4126002 Methylomonas methanica MC09 10673724 YP_004514573.1 CDS Metme_3716 NC_015572.1 4126092 4126322 R PFAM: SirA-like; KEGG: mca:MCA2088 hypothetical protein; SirA-like domain-containing protein complement(4126092..4126322) Methylomonas methanica MC09 10673725 YP_004514574.1 CDS Metme_3717 NC_015572.1 4126397 4127797 D PFAM: Tetrapyrrole methylase; Sirohaem synthase, dimerisation domain; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; HAMAP: Siroheme synthase; KEGG: net:Neut_1002 uroporphyrin-III C-methyltransferase; siroheme synthase 4126397..4127797 Methylomonas methanica MC09 10673726 YP_004514575.1 CDS Metme_3718 NC_015572.1 4127995 4128330 D hypothetical protein 4127995..4128330 Methylomonas methanica MC09 10673727 YP_004514576.1 CDS Metme_3719 NC_015572.1 4128410 4129024 R KEGG: mca:MCA1668 hypothetical protein; hypothetical protein complement(4128410..4129024) Methylomonas methanica MC09 10673728 YP_004514577.1 CDS Metme_3720 NC_015572.1 4129186 4130394 R PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: pen:PSEEN1210 argininosuccinate synthase; argininosuccinate synthase complement(4129186..4130394) Methylomonas methanica MC09 10673729 YP_004514578.1 CDS Metme_3721 NC_015572.1 4130488 4131747 R PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; KEGG: nhl:Nhal_3504 three-deoxy-D-manno-octulosonic-acid transferase domain protein; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein complement(4130488..4131747) Methylomonas methanica MC09 10673730 YP_004514579.1 CDS Metme_3722 NC_015572.1 4132143 4132598 R KEGG: cyj:Cyan7822_2577 hypothetical protein; hypothetical protein complement(4132143..4132598) Methylomonas methanica MC09 10673731 YP_004514580.1 CDS Metme_3723 NC_015572.1 4132690 4133028 R PFAM: Domain of unknown function, Spy-related; KEGG: neu:NE0512 hypothetical protein; hypothetical protein complement(4132690..4133028) Methylomonas methanica MC09 10673732 YP_004514581.1 CDS Metme_3724 NC_015572.1 4133141 4133839 R KEGG: neu:NE0514 response regulator BaeR; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator complement(4133141..4133839) Methylomonas methanica MC09 10673733 YP_004514582.1 CDS Metme_3725 NC_015572.1 4133839 4135284 R KEGG: neu:NE0515 sensory transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; integral membrane sensor signal transduction histidine kinase complement(4133839..4135284) Methylomonas methanica MC09 10673734 YP_004514583.1 CDS Metme_3726 NC_015572.1 4135408 4136148 D KEGG: asa:ASA_3376 ROK family protein; PFAM: ROK; polyphosphate--glucose phosphotransferase 4135408..4136148 Methylomonas methanica MC09 10673735 YP_004514584.1 CDS Metme_3727 NC_015572.1 4136183 4136830 D PFAM: ABC transporter-like; KEGG: mca:MCA0168 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 4136183..4136830 Methylomonas methanica MC09 10673736 YP_004514585.1 CDS Metme_3728 NC_015572.1 4136832 4137629 D KEGG: mca:MCA0169 ABC transporter, permease, TIGRFAM: Conserved hypothetical protein CHP00245; PFAM: Conserved hypothetical protein CHP00245; hypothetical protein 4136832..4137629 Methylomonas methanica MC09 10673737 YP_004514586.1 CDS Metme_3729 NC_015572.1 4137810 4138538 R KEGG: hypothetical protein; hypothetical protein complement(4137810..4138538) Methylomonas methanica MC09 10673738 YP_004514587.1 CDS Metme_3730 NC_015572.1 4139377 4139562 R hypothetical protein complement(4139377..4139562) Methylomonas methanica MC09 10673739 YP_004514588.1 CDS Metme_3731 NC_015572.1 4139590 4140402 D PFAM: Formate/nitrite transporter; KEGG: tbd:Tbd_1943 l formate transporter; formate/nitrite transporter 4139590..4140402 Methylomonas methanica MC09 10673740 YP_004514589.1 CDS Metme_3732 NC_015572.1 4140519 4142246 D KEGG: dar:Daro_0820 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Protein phosphatase 2C, N-terminal; SMART: Serine/threonine-protein kinase domain; Protein phosphatase 2C-related; Tyrosine-protein kinase, subgroup, catalytic domain; Ser/Thr phosphatase 4140519..4142246 Methylomonas methanica MC09 10673741 YP_004514590.1 CDS Metme_3733 NC_015572.1 4142273 4144129 R SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: nwa:Nwat_1476 malto-oligosyltrehalose trehalohydrolase; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal; malto-oligosyltrehalose trehalohydrolase complement(4142273..4144129) Methylomonas methanica MC09 10673742 YP_004514591.1 CDS Metme_3734 NC_015572.1 4144226 4145662 R TIGRFAM: Pyruvate kinase; KEGG: tkm:TK90_2387 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; pyruvate kinase complement(4144226..4145662) Methylomonas methanica MC09 10673743 YP_004514592.1 CDS Metme_3735 NC_015572.1 4145672 4146685 R TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: nhl:Nhal_3449 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase complement(4145672..4146685) Methylomonas methanica MC09 10673744 YP_004514593.1 CDS Metme_3736 NC_015572.1 4147047 4149101 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: gme:Gmet_1669 TonB-dependent receptor, plug; TonB-dependent receptor 4147047..4149101 Methylomonas methanica MC09 10673745 YP_004514594.1 CDS Metme_3737 NC_015572.1 4149132 4150223 D PFAM: Protein of unknown function DUF2006; KEGG: mgm:Mmc1_1599 secreted hydrolase-like protein; hypothetical protein 4149132..4150223 Methylomonas methanica MC09 10673746 YP_004514595.1 CDS Metme_3738 NC_015572.1 4150473 4151114 D KEGG: slt:Slit_0937 hypothetical protein; hypothetical protein 4150473..4151114 Methylomonas methanica MC09 10673747 YP_004514596.1 CDS Metme_3739 NC_015572.1 4151104 4154148 D KEGG: dap:Dacet_2058 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase 4151104..4154148 Methylomonas methanica MC09 10673748 YP_004514597.1 CDS Metme_3740 NC_015572.1 4154145 4155065 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: alv:Alvin_2394 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase 4154145..4155065 Methylomonas methanica MC09 10673749 YP_004514598.1 CDS Metme_3741 NC_015572.1 4155128 4157377 R TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold; PAS fold-3; KEGG: mca:MCA1683 sensory box protein; SMART: Protein phosphatase 2C-related; PAC motif; PAS; PAS/PAC sensor protein complement(4155128..4157377) Methylomonas methanica MC09 10673750 YP_004514599.1 CDS Metme_3742 NC_015572.1 4157380 4159041 R KEGG: mca:MCA0996 thiamine pyrophosphate enzyme family decarboxylase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate decarboxylase complement(4157380..4159041) Methylomonas methanica MC09 10673751 YP_004514600.1 CDS Metme_3743 NC_015572.1 4159330 4159662 D KEGG: nwa:Nwat_3031 anti-sigma-factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 4159330..4159662 Methylomonas methanica MC09 10673752 YP_004514601.1 CDS Metme_3744 NC_015572.1 4159678 4160103 D PFAM: ATP-binding region, ATPase-like; KEGG: mca:MCA1685 anti-sigma B factor; anti-sigma regulatory factor 4159678..4160103 Methylomonas methanica MC09 10673753 YP_004514602.1 CDS Metme_3745 NC_015572.1 4160158 4163487 D PFAM: Bacterial NAD-glutamate dehydrogenase; KEGG: nhl:Nhal_0405 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 4160158..4163487 Methylomonas methanica MC09 10673754 YP_004514603.1 CDS Metme_3746 NC_015572.1 4163550 4165880 R PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: mca:MCA2074 TonB domain-containing protein; TonB-dependent receptor complement(4163550..4165880) Methylomonas methanica MC09 10673755 YP_004514604.1 CDS Metme_3747 NC_015572.1 4166088 4167245 D SMART: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; TIGRFAM: Ribonuclease D; KEGG: tgr:Tgr7_0509 ribonuclease D; PFAM: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; ribonuclease D 4166088..4167245 Methylomonas methanica MC09 10673756 YP_004514605.1 CDS Metme_3748 NC_015572.1 4167306 4171406 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; MASE1; PAS fold; PAS fold-4; KEGG: slt:Slit_0879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(4167306..4171406) Methylomonas methanica MC09 10673757 YP_004514606.1 CDS Metme_3749 NC_015572.1 4171433 4172086 R PFAM: Uncharacterised protein family UPF0016; KEGG: app:CAP2UW1_0879 protein of unknown function UPF0016; hypothetical protein complement(4171433..4172086) Methylomonas methanica MC09 10673758 YP_004514607.1 CDS Metme_3750 NC_015572.1 4172167 4173096 R PFAM: Zinc/iron permease; KEGG: mca:MCA2417 ZIP zinc transporter family protein; zinc/iron permease complement(4172167..4173096) Methylomonas methanica MC09 10673759 YP_004514608.1 CDS Metme_3751 NC_015572.1 4173245 4174225 R PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); TIGRFAM: Lysyl-tRNA synthetase-related; HAMAP: Lysyl-tRNA synthetase-related; KEGG: mca:MCA1319 hypothetical protein; hypothetical protein complement(4173245..4174225) Methylomonas methanica MC09 10673760 YP_004514609.1 CDS Metme_3752 NC_015572.1 4174225 4174794 R TIGRFAM: Translation elongation factor P; HAMAP: Translation elongation factor P; KEGG: mca:MCA1320 elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; elongation factor P complement(4174225..4174794) Methylomonas methanica MC09 10673761 YP_004514610.1 CDS Metme_3753 NC_015572.1 4175014 4176000 D TIGRFAM: lysine-2,3-aminomutase-related protein; Protein of unknown function DUF160; KEGG: mca:MCA1321 hypothetical protein; PFAM: Radical SAM; lysine-2,3-aminomutase-like protein 4175014..4176000 Methylomonas methanica MC09 10673762 YP_004514611.1 CDS Metme_3754 NC_015572.1 4176078 4180061 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; PAS fold-4; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: syn:slr2104 hybrid sensory kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase 4176078..4180061 Methylomonas methanica MC09 10673763 YP_004514612.1 CDS Metme_3755 NC_015572.1 4180064 4180990 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: alv:Alvin_2394 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase 4180064..4180990 Methylomonas methanica MC09 10673764 YP_004514613.1 CDS Metme_3756 NC_015572.1 4181071 4181775 D KEGG: mca:MCA1095 hypothetical protein; hypothetical protein 4181071..4181775 Methylomonas methanica MC09 10673765 YP_004514614.1 CDS Metme_3757 NC_015572.1 4181796 4182767 D KEGG: mca:MCA1096 sigma-54-dependent transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; Fis family transcriptional regulator 4181796..4182767 Methylomonas methanica MC09 10673766 YP_004514615.1 CDS Metme_3758 NC_015572.1 4182816 4183556 R SMART: Protein phosphatase 2C-related; KEGG: slt:Slit_0402 protein serine/threonine phosphatase; Ser/Thr phosphatase complement(4182816..4183556) Methylomonas methanica MC09 10673767 YP_004514616.1 CDS Metme_3759 NC_015572.1 4183563 4184306 R PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: alv:Alvin_1715 pyridoxal phosphate biosynthetic protein PdxJ; pyridoxine 5'-phosphate synthase complement(4183563..4184306) Methylomonas methanica MC09 10673768 YP_004514617.1 CDS Metme_3760 NC_015572.1 4184410 4185111 R TIGRFAM: Recombination protein O, RecO; HAMAP: DNA repair protein recO; KEGG: mca:MCA1461 DNA repair protein RecO; PFAM: Recombination protein O, RecO; DNA repair protein recO complement(4184410..4185111) Methylomonas methanica MC09 10673769 YP_004514618.1 CDS Metme_3761 NC_015572.1 4185114 4186001 R TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: mca:MCA1462 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; GTP-binding protein Era complement(4185114..4186001) Methylomonas methanica MC09 10673770 YP_004514619.1 CDS Metme_3762 NC_015572.1 4186001 4186681 R KEGG: mca:MCA1463 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA binding; ribonuclease 3 complement(4186001..4186681) Methylomonas methanica MC09 10673771 YP_004514620.1 CDS Metme_3763 NC_015572.1 4186678 4187055 R KEGG: mca:MCA1464 hypothetical protein; hypothetical protein complement(4186678..4187055) Methylomonas methanica MC09 10673772 YP_004514621.1 CDS Metme_3764 NC_015572.1 4187085 4187861 R KEGG: mca:MCA1465 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I complement(4187085..4187861) Methylomonas methanica MC09 10673773 YP_004514622.1 CDS Metme_3765 NC_015572.1 4187876 4189675 R TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: mca:MCA1466 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein LepA complement(4187876..4189675) Methylomonas methanica MC09 10673774 YP_004514623.1 CDS Metme_3766 NC_015572.1 4189741 4190439 R KEGG: mca:MCA2439 cell division protein ZipA, PFAM: ZipA, C-terminal FtsZ-binding region; SMART: ZipA, C-terminal FtsZ-binding region; ZipA FtsZ-binding region protein complement(4189741..4190439) Methylomonas methanica MC09 10673775 YP_004514624.1 CDS Metme_3767 NC_015572.1 4190439 4193939 R KEGG: tgr:Tgr7_2026 chromosome segregation SMC protein; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal; SMCs flexible hinge; chromosome segregation protein SMC complement(4190439..4193939) Methylomonas methanica MC09 10673776 YP_004514625.1 CDS Metme_3768 NC_015572.1 4194136 4194648 D PFAM: Guanine-specific ribonuclease N1/T1; KEGG: msm:MSMEG_0208 ribonuclease; guanine-specific ribonuclease N1 and T1 4194136..4194648 Methylomonas methanica MC09 10673777 YP_004514626.1 CDS Metme_3769 NC_015572.1 4194645 4195535 R TIGRFAM: ADP-ribosyl-dinitrogen reductase hydrolase; KEGG: rru:Rru_A1008 ADP-ribosyl-(dinitrogen reductase) hydrolase; PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosyl-(dinitrogen reductase) hydrolase complement(4194645..4195535) Methylomonas methanica MC09 10673778 YP_004514627.1 CDS Metme_3770 NC_015572.1 4195557 4196366 R KEGG: mca:MCA1828 dinitrogenase reductase ADP-ribosyltransferase-like protein; PFAM: Dinitrogenase reductase ADP-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase complement(4195557..4196366) Methylomonas methanica MC09 10673779 YP_004514628.1 CDS Metme_3771 NC_015572.1 4196505 4196900 D PFAM: thiol-disulphide oxidoreductase DCC; KEGG: rba:RB11399 hypothetical protein; thiol-disulfide oxidoreductase 4196505..4196900 Methylomonas methanica MC09 10673780 YP_004514629.1 CDS Metme_3772 NC_015572.1 4197016 4198551 D KEGG: afl:Aflv_2201 phytoene dehydrogenase; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase; phytoene desaturase 4197016..4198551 Methylomonas methanica MC09 10673781 YP_004514630.1 CDS Metme_3773 NC_015572.1 4198554 4200146 D PFAM: Aldehyde dehydrogenase; KEGG: bbe:BBR47_48070 aldehyde dehydrogenase; aldehyde dehydrogenase 4198554..4200146 Methylomonas methanica MC09 10673782 YP_004514631.1 CDS Metme_3774 NC_015572.1 4200128 4201636 D KEGG: oih:OB2459 phytoene dehydrogenase; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; phytoene desaturase 4200128..4201636 Methylomonas methanica MC09 10673783 YP_004514632.1 CDS Metme_3775 NC_015572.1 4202034 4202732 D hypothetical protein 4202034..4202732 Methylomonas methanica MC09 10673784 YP_004514633.1 CDS Metme_3776 NC_015572.1 4202911 4203309 R PFAM: Transposase IS3/IS911; KEGG: dac:Daci_3090 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(4202911..4203309) Methylomonas methanica MC09 10673785 YP_004514634.1 CDS Metme_3777 NC_015572.1 4203361 4203522 R hypothetical protein complement(4203361..4203522) Methylomonas methanica MC09 10673786 YP_004514635.1 CDS Metme_3778 NC_015572.1 4203519 4203665 R hypothetical protein complement(4203519..4203665) Methylomonas methanica MC09 10673787 YP_004514636.1 CDS Metme_3780 NC_015572.1 4204755 4206236 R PFAM: Integrase, catalytic core; KEGG: pol:Bpro_5321 ISPsy20, transposase IstA; integrase catalytic subunit complement(4204755..4206236) Methylomonas methanica MC09 10673789 YP_004514637.1 CDS Metme_3781 NC_015572.1 4206664 4207599 R KEGG: psl:Psta_2515 lipolytic protein G-D-S-L family; hypothetical protein complement(4206664..4207599) Methylomonas methanica MC09 10673790 YP_004514638.1 CDS Metme_3782 NC_015572.1 4207677 4208804 R PFAM: Acyltransferase 3; KEGG: ret:RHE_CH00500 acyltransferase; acyltransferase complement(4207677..4208804) Methylomonas methanica MC09 10673791 YP_004514639.1 CDS Metme_3785 NC_015572.1 4209936 4211018 R PFAM: Integrase, catalytic core; KEGG: ppr:PBPRA2371 transposase; integrase catalytic subunit complement(4209936..4211018) Methylomonas methanica MC09 10673794 YP_004514640.1 CDS Metme_3786 NC_015572.1 4211015 4211515 R KEGG: pna:Pnap_1740 transposase; transposase complement(4211015..4211515) Methylomonas methanica MC09 10673795 YP_004514641.1 CDS Metme_3787 NC_015572.1 4211672 4211821 R hypothetical protein complement(4211672..4211821) Methylomonas methanica MC09 10673796 YP_004514642.1 CDS Metme_3788 NC_015572.1 4211811 4213331 R PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region; integrase catalytic subunit complement(4211811..4213331) Methylomonas methanica MC09 10673797 YP_004514643.1 CDS Metme_3789 NC_015572.1 4213532 4213774 D hypothetical protein 4213532..4213774 Methylomonas methanica MC09 10673798 YP_004514644.1 CDS Metme_3790 NC_015572.1 4213953 4214315 R TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: aeh:Mlg_0484 50S ribosomal protein L17P; PFAM: Ribosomal protein L17; 50S ribosomal protein L17 complement(4213953..4214315) Methylomonas methanica MC09 10673800 YP_004514645.1 CDS Metme_3791 NC_015572.1 4214331 4215338 R SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: ttu:TERTU_0933 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase subunit alpha complement(4214331..4215338) Methylomonas methanica MC09 10673801 YP_004514646.1 CDS Metme_3792 NC_015572.1 4215355 4215975 R TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: mca:MCA2348 30S ribosomal protein S4; SMART: RNA-binding S4; 30S ribosomal protein S4 complement(4215355..4215975) Methylomonas methanica MC09 10673802 YP_004514647.1 CDS Metme_3793 NC_015572.1 4215993 4216379 R KEGG: asa:ASA_4064 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11; 30S ribosomal protein S11 complement(4215993..4216379) Methylomonas methanica MC09 10673803 YP_004514648.1 CDS Metme_3794 NC_015572.1 4216401 4216757 R KEGG: kko:Kkor_0459 ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13; 30S ribosomal protein S13 complement(4216401..4216757) Methylomonas methanica MC09 10673804 YP_004514649.1 CDS Metme_3795 NC_015572.1 4216827 4216940 R PFAM: Ribosomal protein L36; manually curated; TIGRFAM: Ribosomal protein L36; KEGG: tkm:TK90_2148 ribosomal protein L36; HAMAP: Ribosomal protein L36; 50S ribosomal protein L36 complement(4216827..4216940) Methylomonas methanica MC09 10673805 YP_004514650.1 CDS Metme_3796 NC_015572.1 4216961 4218286 R KEGG: mca:MCA2352 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein; preprotein translocase subunit SecY complement(4216961..4218286) Methylomonas methanica MC09 10673806 YP_004514651.1 CDS Metme_3797 NC_015572.1 4218287 4218721 R KEGG: tgr:Tgr7_2305 ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15; 50S ribosomal protein L15 complement(4218287..4218721) Methylomonas methanica MC09 10673807 YP_004514652.1 CDS Metme_3798 NC_015572.1 4218721 4218906 R KEGG: dno:DNO_1257 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region; 50S ribosomal protein L30 complement(4218721..4218906) Methylomonas methanica MC09 10673808 YP_004514653.1 CDS Metme_3799 NC_015572.1 4218912 4219418 R KEGG: mca:MCA2355 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal; 30S ribosomal protein S5 complement(4218912..4219418) Methylomonas methanica MC09 10673809 YP_004514654.1 CDS Metme_3800 NC_015572.1 4219430 4219783 R KEGG: aeh:Mlg_0474 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5; 50S ribosomal protein L18 complement(4219430..4219783) Methylomonas methanica MC09 10673810 YP_004514655.1 CDS Metme_3801 NC_015572.1 4219792 4220325 R KEGG: tcx:Tcr_0310 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 complement(4219792..4220325) Methylomonas methanica MC09 10673811 YP_004514656.1 CDS Metme_3802 NC_015572.1 4220341 4220736 R PFAM: Ribosomal protein S8; KEGG: saz:Sama_0227 30S ribosomal protein S8; 30S ribosomal protein S8 complement(4220341..4220736) Methylomonas methanica MC09 10673812 YP_004514657.1 CDS Metme_3803 NC_015572.1 4220767 4221072 R KEGG: abo:ABO_0410 30S ribosomal protein S14; HAMAP: 30S ribosomal protein S14; PFAM: Ribosomal protein S14; 30S ribosomal protein S14 complement(4220767..4221072) Methylomonas methanica MC09 10673813 YP_004514658.1 CDS Metme_3804 NC_015572.1 4221084 4221623 R PFAM: Ribosomal protein L5; KEGG: mep:MPQ_0332 ribosomal protein L5; 50S ribosomal protein L5 complement(4221084..4221623) Methylomonas methanica MC09 10673814 YP_004514659.1 CDS Metme_3805 NC_015572.1 4221636 4221953 R TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: dar:Daro_0330 50S ribosomal protein L24; SMART: KOW; 50S ribosomal protein L24 complement(4221636..4221953) Methylomonas methanica MC09 10673815 YP_004514660.1 CDS Metme_3806 NC_015572.1 4221969 4222337 R KEGG: alv:Alvin_2353 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e; 50S ribosomal protein L14 complement(4221969..4222337) Methylomonas methanica MC09 10673816 YP_004514661.1 CDS Metme_3807 NC_015572.1 4222366 4222629 R KEGG: amc:MADE_00454 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17; 30S ribosomal protein S17 complement(4222366..4222629) Methylomonas methanica MC09 10673817 YP_004514662.1 CDS Metme_3808 NC_015572.1 4222632 4222823 R KEGG: nhl:Nhal_2393 ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; 50S ribosomal protein L29 complement(4222632..4222823) Methylomonas methanica MC09 10673818 YP_004514663.1 CDS Metme_3809 NC_015572.1 4222823 4223236 R PFAM: Ribosomal protein L10e/L16; manually curated; TIGRFAM: Ribosomal protein L16; KEGG: mca:MCA2365 50S ribosomal protein L16; HAMAP: Ribosomal protein L16; 50S ribosomal protein L16 complement(4222823..4223236) Methylomonas methanica MC09 10673819 YP_004514664.1 CDS Metme_3810 NC_015572.1 4223253 4223924 R TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: mca:MCA2366 30S ribosomal protein S3; SMART: K Homology; 30S ribosomal protein S3 complement(4223253..4223924) Methylomonas methanica MC09 10673820 YP_004514665.1 CDS Metme_3811 NC_015572.1 4223937 4224269 R KEGG: abo:ABO_0402 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17; 50S ribosomal protein L22 complement(4223937..4224269) Methylomonas methanica MC09 10673821 YP_004514666.1 CDS Metme_3812 NC_015572.1 4224278 4224550 R KEGG: hna:Hneap_0327 ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15; 30S ribosomal protein S19 complement(4224278..4224550) Methylomonas methanica MC09 10673822 YP_004514667.1 CDS Metme_3813 NC_015572.1 4224563 4225390 R KEGG: cja:CJA_0702 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2; 50S ribosomal protein L2 complement(4224563..4225390) Methylomonas methanica MC09 10673823 YP_004514668.1 CDS Metme_3814 NC_015572.1 4225420 4225719 R PFAM: Ribosomal protein L25/L23; KEGG: mca:MCA2370 ribosomal protein L23; 50S ribosomal protein L25 complement(4225420..4225719) Methylomonas methanica MC09 10673824 YP_004514669.1 CDS Metme_3815 NC_015572.1 4225716 4226336 R PFAM: Ribosomal protein L4/L1e; KEGG: mca:MCA2371 50S ribosomal protein L4; 50S ribosomal protein L4 complement(4225716..4226336) Methylomonas methanica MC09 10673825 YP_004514670.1 CDS Metme_3816 NC_015572.1 4226340 4226990 R KEGG: aeh:Mlg_0458 50S ribosomal protein L3P; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3; 50S ribosomal protein L3 complement(4226340..4226990) Methylomonas methanica MC09 10673826 YP_004514671.1 CDS Metme_3817 NC_015572.1 4227018 4227329 R TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: abo:ABO_0396 30S ribosomal protein S10; PFAM: Ribosomal protein S10; 30S ribosomal protein S10 complement(4227018..4227329) Methylomonas methanica MC09 10673827 YP_004514672.1 CDS Metme_3818 NC_015572.1 4227336 4228526 R KEGG: tgr:Tgr7_2338 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu complement(4227336..4228526) Methylomonas methanica MC09 10673828 YP_004514673.1 CDS Metme_3819 NC_015572.1 4228555 4230651 R manually curated; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; KEGG: mca:MCA2375 elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; translation elongation factor G complement(4228555..4230651) Methylomonas methanica MC09 10673829 YP_004514674.1 CDS Metme_3820 NC_015572.1 4230677 4231147 R KEGG: aeh:Mlg_0454 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7; 30S ribosomal protein S7 complement(4230677..4231147) Methylomonas methanica MC09 10673830 YP_004514675.1 CDS Metme_3821 NC_015572.1 4231161 4231535 R KEGG: kko:Kkor_0432 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23; 30S ribosomal protein S12 complement(4231161..4231535) Methylomonas methanica MC09 10673831 YP_004514676.1 CDS Metme_3822 NC_015572.1 4231687 4235910 R SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: mca:MCA1067 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; DNA-directed RNA polymerase subunit beta' complement(4231687..4235910) Methylomonas methanica MC09 10673832 YP_004514677.1 CDS Metme_3823 NC_015572.1 4235986 4240062 R TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: mca:MCA1066 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; DNA-directed RNA polymerase subunit beta complement(4235986..4240062) Methylomonas methanica MC09 10673833 YP_004514678.1 CDS Metme_3824 NC_015572.1 4240190 4240558 R TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: alv:Alvin_2371 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; 50S ribosomal protein L7/L12 complement(4240190..4240558) Methylomonas methanica MC09 10673834 YP_004514679.1 CDS Metme_3825 NC_015572.1 4240606 4241100 R KEGG: mca:MCA1064 50S ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 complement(4240606..4241100) Methylomonas methanica MC09 10673835 YP_004514680.1 CDS Metme_3826 NC_015572.1 4241276 4241971 R KEGG: msu:MS0208 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1; 50S ribosomal protein L1 complement(4241276..4241971) Methylomonas methanica MC09 10673836 YP_004514681.1 CDS Metme_3827 NC_015572.1 4241971 4242402 R TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal; KEGG: mca:MCA1062 ribosomal protein L11; SMART: Ribosomal protein L11; 50S ribosomal protein L11 complement(4241971..4242402) Methylomonas methanica MC09 10673837 YP_004514682.1 CDS Metme_3828 NC_015572.1 4242504 4243037 R TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: mca:MCA1061 transcription antitermination protein NusG; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; NusG antitermination factor complement(4242504..4243037) Methylomonas methanica MC09 10673838 YP_004514683.1 CDS Metme_3829 NC_015572.1 4243037 4243417 R KEGG: hha:Hhal_0871 preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein; preprotein translocase subunit SecE complement(4243037..4243417) Methylomonas methanica MC09 10673839 YP_004514684.1 CDS Metme_3830 NC_015572.1 4243563 4244753 R KEGG: tgr:Tgr7_2338 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu complement(4243563..4244753) Methylomonas methanica MC09 10673841 YP_004514685.1 CDS Metme_3831 NC_015572.1 4245133 4245711 R PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: dno:DNO_0063 peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(4245133..4245711) Methylomonas methanica MC09 10673845 YP_004514686.1 CDS Metme_3832 NC_015572.1 4245724 4246338 R TIGRFAM: Ribosomal protein L25; HAMAP: 50S ribosomal protein L25; Ribosomal protein L25; KEGG: mca:MCA1057 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25, N-terminal; 50S ribosomal protein L25 complement(4245724..4246338) Methylomonas methanica MC09 10673846 YP_004514687.1 CDS Metme_3833 NC_015572.1 4246387 4247340 R TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: mca:MCA1056 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(4246387..4247340) Methylomonas methanica MC09 10673847 YP_004514688.1 CDS Metme_3834 NC_015572.1 4247466 4248323 R PFAM: GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: alv:Alvin_2383 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(4247466..4248323) Methylomonas methanica MC09 10673849 YP_004514689.1 CDS Metme_3835 NC_015572.1 4248332 4248901 R KEGG: mca:MCA1054 outer membrane lipoprotein LolB, TIGRFAM: Outer membrane lipoprotein LolB; PFAM: Outer membrane lipoprotein LolB; molecular chaperone LolB complement(4248332..4248901) Methylomonas methanica MC09 10673850 YP_004514690.1 CDS Metme_3836 NC_015572.1 4248898 4250622 R PFAM: Sel1-like; Tetratricopeptide TPR-1; KEGG: mca:MCA1053 TPR domain-containing protein; Sel1 domain-containing protein repeat-containing protein complement(4248898..4250622) Methylomonas methanica MC09 10673851 YP_004514691.1 CDS Metme_3837 NC_015572.1 4250768 4252018 D TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: mca:MCA1052 glutamyl-tRNA reductase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; glutamyl-tRNA reductase 4250768..4252018 Methylomonas methanica MC09 10673852 YP_004514692.1 CDS Metme_3838 NC_015572.1 4252028 4253113 D TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: mca:MCA1051 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor; peptide chain release factor 1 4252028..4253113 Methylomonas methanica MC09 10673853 YP_004514693.1 CDS Metme_3839 NC_015572.1 4253106 4253975 D KEGG: mca:MCA1050 protein methyltransferase HemK; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase 4253106..4253975 Methylomonas methanica MC09 10673854 YP_004514694.1 CDS Metme_3840 NC_015572.1 4253972 4254397 D SMART: Mov34/MPN/PAD-1; KEGG: nhl:Nhal_0257 Mov34/MPN/PAD-1 family protein; Mov34/MPN/PAD-1 family protein 4253972..4254397 Methylomonas methanica MC09 10673855 YP_004514695.1 CDS Metme_3841 NC_015572.1 4254355 4255356 R KEGG: rrs:RoseRS_1483 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter complement(4254355..4255356) Methylomonas methanica MC09 10673856 YP_004514696.1 CDS Metme_3842 NC_015572.1 4255418 4257307 R PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; KEGG: sli:Slin_1125 NADH dehydrogenase (quinone); NADH-ubiquinone/plastoquinone (complex I) oxidoreductase complement(4255418..4257307) Methylomonas methanica MC09 10673857 YP_004514697.1 CDS Metme_3843 NC_015572.1 4257304 4259865 R KEGG: avn:Avin_17870 hypothetical protein; HAMAP: UPF0753 protein; PFAM: Protein of unknown function DUF2309; hypothetical protein complement(4257304..4259865) Methylomonas methanica MC09 10673858 YP_004514698.1 CDS Metme_3844 NC_015572.1 4260257 4261903 D PFAM: Sulphate transporter; KEGG: mca:MCA2472 sulfate transporter family protein; sulfate transporter 4260257..4261903 Methylomonas methanica MC09 10673859 YP_004514699.1 CDS Metme_3845 NC_015572.1 4262091 4263521 D KEGG: nhl:Nhal_3134 ATP-binding region ATPase domain protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; histidine kinase 4262091..4263521 Methylomonas methanica MC09 10673860 YP_004514700.1 CDS Metme_3846 NC_015572.1 4263555 4264952 D KEGG: noc:Noc_1623 two component, sigma-54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator 4263555..4264952 Methylomonas methanica MC09 10673861 YP_004514701.1 CDS Metme_3847 NC_015572.1 4264962 4265510 R KEGG: nhl:Nhal_2672 hypothetical protein; hypothetical protein complement(4264962..4265510) Methylomonas methanica MC09 10673862 YP_004514702.1 CDS Metme_3848 NC_015572.1 4265546 4266133 D KEGG: alv:Alvin_0368 hypothetical protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520; hypothetical protein 4265546..4266133 Methylomonas methanica MC09 10673863 YP_004514703.1 CDS Metme_3849 NC_015572.1 4266218 4267519 D KEGG: eba:ebA6677 hypothetical protein; hypothetical protein 4266218..4267519 Methylomonas methanica MC09 10673864 YP_004514704.1 CDS Metme_3850 NC_015572.1 4267733 4267858 R hypothetical protein complement(4267733..4267858) Methylomonas methanica MC09 10673865 YP_004514705.1 CDS Metme_3851 NC_015572.1 4268343 4268591 D KEGG: pst:PSPTO_1046 virulence-associated protein; hypothetical protein 4268343..4268591 Methylomonas methanica MC09 10673866 YP_004514706.1 CDS Metme_3853 NC_015572.1 4269038 4269691 D manually curated; PFAM: Helix-turn-helix type 3; KEGG: hha:Hhal_1869 transcriptional regulator; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 4269038..4269691 Methylomonas methanica MC09 10673868 YP_004514707.1 CDS Metme_3854 NC_015572.1 4269734 4271782 D manually curated; TIGRFAM: TonB-dependent siderophore receptor; KEGG: ana:alr2175 ferrichrome iron receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; TonB-dependent siderophore receptor 4269734..4271782 Methylomonas methanica MC09 10673869 YP_004514708.1 CDS Metme_3855 NC_015572.1 4271936 4272301 R KEGG: sbl:Sbal_1344 hypothetical protein; hypothetical protein complement(4271936..4272301) Methylomonas methanica MC09 10673870 YP_004514709.1 CDS Metme_3856 NC_015572.1 4272670 4273230 R KEGG: bam:Bamb_4800 hypothetical protein; hypothetical protein complement(4272670..4273230) Methylomonas methanica MC09 10673871 YP_004514710.1 CDS Metme_3857 NC_015572.1 4273762 4275081 D KEGG: sde:Sde_1233 TRAP dicarboxylate transporter, DctM subunit; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 4273762..4275081 Methylomonas methanica MC09 10673872 YP_004514711.1 CDS Metme_3858 NC_015572.1 4275132 4275824 D KEGG: pmy:Pmen_4120 DNA-binding response regulator CreB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 4275132..4275824 Methylomonas methanica MC09 10673873 YP_004514712.1 CDS Metme_3859 NC_015572.1 4275828 4277276 D KEGG: cja:CJA_1407 sensory histidine kinase CreC; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; integral membrane sensor signal transduction histidine kinase 4275828..4277276 Methylomonas methanica MC09 10673874 YP_004514713.1 CDS Metme_3860 NC_015572.1 4277506 4278180 D HAMAP: Thiopurine S-methyltransferase; KEGG: psa:PST_1312 thiopurine S-methyltransferase; PFAM: Thiopurine S-methyltransferase; thiopurine S-methyltransferase 4277506..4278180 Methylomonas methanica MC09 10673875 YP_004514714.1 CDS Metme_3861 NC_015572.1 4278306 4279304 D KEGG: ptm:GSPATT00028720001 hypothetical protein; PFAM: MORN motif; SMART: MORN motif; MORN repeat-containing protein 4278306..4279304 Methylomonas methanica MC09 10673876 YP_004514715.1 CDS Metme_3862 NC_015572.1 4279349 4281427 R KEGG: mgm:Mmc1_1921 serine/threonine protein kinase; PFAM: Sulphatase-modifying factor; Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; serine/threonine protein kinase complement(4279349..4281427) Methylomonas methanica MC09 10673877 YP_004514716.1 CDS Metme_3863 NC_015572.1 4281511 4283517 D KEGG: hna:Hneap_1994 vault protein inter-alpha-trypsin domain protein; PFAM: Vault protein inter-alpha-trypsin; von Willebrand factor, type A; SMART: von Willebrand factor, type A; Vault protein inter-alpha-trypsin, metazoa; Vault protein inter-alpha-trypsin domain-containing protein 4281511..4283517 Methylomonas methanica MC09 10673878 YP_004514717.1 CDS Metme_3864 NC_015572.1 4283504 4284319 D KEGG: hna:Hneap_1995 hypothetical protein; hypothetical protein 4283504..4284319 Methylomonas methanica MC09 10673879 YP_004514718.1 CDS Metme_3865 NC_015572.1 4284703 4286208 D PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, KEGG: neu:NE1263 hypothetical protein; hypothetical protein 4284703..4286208 Methylomonas methanica MC09 10673880 YP_004514719.1 CDS Metme_3866 NC_015572.1 4286243 4287685 D PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: cpb:Cphamn1_1902 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 4286243..4287685 Methylomonas methanica MC09 10673881 YP_004514720.1 CDS Metme_3867 NC_015572.1 4287751 4288176 D KEGG: mca:MCA0938 hypothetical protein; hypothetical protein 4287751..4288176 Methylomonas methanica MC09 10673882 YP_004514721.1 CDS Metme_3868 NC_015572.1 4288288 4290897 R KEGG: mca:MCA0389 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; alanyl-tRNA synthetase complement(4288288..4290897) Methylomonas methanica MC09 10673883 YP_004514722.1 CDS Metme_3869 NC_015572.1 4290982 4291230 R PFAM: Protein of unknown function DUF86; KEGG: fra:Francci3_2193 hypothetical protein; hypothetical protein complement(4290982..4291230) Methylomonas methanica MC09 10673884 YP_004514723.1 CDS Metme_3870 NC_015572.1 4291220 4291531 R PFAM: Nucleotidyltransferase; KEGG: ami:Amir_6474 DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein complement(4291220..4291531) Methylomonas methanica MC09 10673885 YP_004514724.1 CDS Metme_3871 NC_015572.1 4291845 4292066 D hypothetical protein 4291845..4292066 Methylomonas methanica MC09 10673886 YP_004514725.1 CDS Metme_3872 NC_015572.1 4292137 4292394 R manually curated; KEGG: cyh:Cyan8802_3861 hypothetical protein; hypothetical protein complement(4292137..4292394) Methylomonas methanica MC09 10673887 YP_004514726.1 CDS Metme_3873 NC_015572.1 4292391 4292603 R KEGG: cyh:Cyan8802_3860 hypothetical protein; hypothetical protein complement(4292391..4292603) Methylomonas methanica MC09 10673888 YP_004514727.1 CDS Metme_3874 NC_015572.1 4292606 4293097 R KEGG: tgr:Tgr7_1288 regulatory protein RecX; HAMAP: Regulatory protein recX; PFAM: Regulatory protein RecX; Regulatory protein recX complement(4292606..4293097) Methylomonas methanica MC09 10673889 YP_004514728.1 CDS Metme_3875 NC_015572.1 4293060 4294115 R SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: mca:MCA0387 RecA protein; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; recombinase A complement(4293060..4294115) Methylomonas methanica MC09 10673890 YP_004514729.1 CDS Metme_3876 NC_015572.1 4294235 4294747 R hypothetical protein complement(4294235..4294747) Methylomonas methanica MC09 10673891 YP_004514730.1 CDS Metme_3877 NC_015572.1 4294780 4295250 R KEGG: dma:DMR_08790 hypothetical protein; hypothetical protein complement(4294780..4295250) Methylomonas methanica MC09 10673892 YP_004514731.1 CDS Metme_3878 NC_015572.1 4295360 4295980 D PFAM: SOUL haem-binding protein; KEGG: paa:Paes_2155 SOUL heme-binding protein; SOUL heme-binding protein 4295360..4295980 Methylomonas methanica MC09 10673893 YP_004514732.1 CDS Metme_3879 NC_015572.1 4296160 4297770 R KEGG: mca:MCA1268 peptide ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core; ABC transporter complement(4296160..4297770) Methylomonas methanica MC09 10673894 YP_004514733.1 CDS Metme_3880 NC_015572.1 4297763 4299106 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1266 peptide ABC transporter, permease; ABC transporter permease complement(4297763..4299106) Methylomonas methanica MC09 10673895 YP_004514734.1 CDS Metme_3881 NC_015572.1 4299106 4300083 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1265 peptide ABC transporter, permease; ABC transporter permease complement(4299106..4300083) Methylomonas methanica MC09 10673896 YP_004514735.1 CDS Metme_3882 NC_015572.1 4300133 4300522 R PFAM: PilT protein, N-terminal; KEGG: gur:Gura_2455 PilT domain-containing protein; twitching motility protein PilT complement(4300133..4300522) Methylomonas methanica MC09 10673897 YP_004514736.1 CDS Metme_3883 NC_015572.1 4300494 4300745 R TIGRFAM: Prevent-host-death protein; KEGG: amc:MADE_00630 prevent-host-death protein; prevent-host-death family protein complement(4300494..4300745) Methylomonas methanica MC09 10673898 YP_004514737.1 CDS Metme_3884 NC_015572.1 4300843 4302993 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: mca:MCA1264 peptide ABC transporter, periplasmic peptide-binding protein; ABC transporter substrate-binding protein complement(4300843..4302993) Methylomonas methanica MC09 10673899 YP_004514738.1 CDS Metme_3885 NC_015572.1 4303172 4304362 R HAMAP: Uncharacterised protein family, TER reductase; KEGG: pag:PLES_21131 trans-2-enoyl-CoA reductase; PFAM: Uncharacterised protein family, TER reductase; reductase complement(4303172..4304362) Methylomonas methanica MC09 10673900 YP_004514739.1 CDS Metme_3886 NC_015572.1 4304663 4305403 D KEGG: alv:Alvin_0388 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 4304663..4305403 Methylomonas methanica MC09 10673901 YP_004514740.1 CDS Metme_3887 NC_015572.1 4305452 4305574 R hypothetical protein complement(4305452..4305574) Methylomonas methanica MC09 10673902 YP_004514741.1 CDS Metme_3888 NC_015572.1 4305821 4306255 D KEGG: nmu:Nmul_A0053 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 4305821..4306255 Methylomonas methanica MC09 10673903 YP_004514742.1 CDS Metme_3889 NC_015572.1 4306295 4307794 R KEGG: mca:MCA1132 hypothetical protein; hypothetical protein complement(4306295..4307794) Methylomonas methanica MC09 10673904 YP_004514743.1 CDS Metme_3890 NC_015572.1 4307848 4308387 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cts:Ctha_1325 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(4307848..4308387) Methylomonas methanica MC09 10673905 YP_004514744.1 CDS Metme_3891 NC_015572.1 4308511 4310202 R KEGG: nde:NIDE2024 hypothetical protein; PFAM: Forkhead-associated; Lytic transglycosylase-like, catalytic; SMART: Forkhead-associated; forkhead-associated protein complement(4308511..4310202) Methylomonas methanica MC09 10673906 YP_004514745.1 CDS Metme_3892 NC_015572.1 4311105 4312499 R TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: tgr:Tgr7_1579 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase complement(4311105..4312499) Methylomonas methanica MC09 10673910 YP_004514746.1 CDS Metme_3893 NC_015572.1 4312502 4312966 R KEGG: sfu:Sfum_3151 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein complement(4312502..4312966) Methylomonas methanica MC09 10673911 YP_004514747.1 CDS Metme_3894 NC_015572.1 4313127 4314305 D PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dal:Dalk_0230 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4313127..4314305 Methylomonas methanica MC09 10673912 YP_004514748.1 CDS Metme_3895 NC_015572.1 4314361 4315191 R KEGG: nhl:Nhal_0762 nuclease (SNase domain protein); PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); nuclease complement(4314361..4315191) Methylomonas methanica MC09 10673913 YP_004514749.1 CDS Metme_3896 NC_015572.1 4315203 4315760 D PFAM: Protein of unknown function DUF1415; KEGG: swd:Swoo_3180 hypothetical protein; hypothetical protein 4315203..4315760 Methylomonas methanica MC09 10673914 YP_004514750.1 CDS Metme_3897 NC_015572.1 4315751 4316452 R KEGG: nhl:Nhal_2259 hypothetical protein; hypothetical protein complement(4315751..4316452) Methylomonas methanica MC09 10673915 YP_004514751.1 CDS Metme_3898 NC_015572.1 4316543 4316869 D PFAM: Protein of unknown function DUF2288; KEGG: slt:Slit_2955 protein of unknown function DUF2288; hypothetical protein 4316543..4316869 Methylomonas methanica MC09 10673916 YP_004514752.1 CDS Metme_3899 NC_015572.1 4316859 4317503 R PFAM: DoxX; KEGG: shn:Shewana3_2495 DoxX family protein; DoxX family protein complement(4316859..4317503) Methylomonas methanica MC09 10673917 YP_004514753.1 CDS Metme_3900 NC_015572.1 4317533 4317862 D PFAM: Cupin 2, conserved barrel; KEGG: tdn:Suden_1847 hypothetical protein; cupin 4317533..4317862 Methylomonas methanica MC09 10673918 YP_004514754.1 CDS Metme_3901 NC_015572.1 4318006 4322688 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; CHASE3; PAS fold; PAS fold-4; KEGG: gbm:Gbem_2131 PAS/PAC domain-containing sensor histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; multi-sensor signal transduction histidine kinase 4318006..4322688 Methylomonas methanica MC09 10673919 YP_004514755.1 CDS Metme_3902 NC_015572.1 4322685 4323131 D KEGG: tgr:Tgr7_1115 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 4322685..4323131 Methylomonas methanica MC09 10673920 YP_004514756.1 CDS Metme_3903 NC_015572.1 4323140 4324888 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: gca:Galf_1153 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 4323140..4324888 Methylomonas methanica MC09 10673921 YP_004514757.1 CDS Metme_3904 NC_015572.1 4324918 4326213 R KEGG: reu:Reut_A0517 helicase, C-terminal:type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase complement(4324918..4326213) Methylomonas methanica MC09 10673922 YP_004514758.1 CDS Metme_3905 NC_015572.1 4326360 4326719 D hypothetical protein 4326360..4326719 Methylomonas methanica MC09 10673923 YP_004514759.1 CDS Metme_3906 NC_015572.1 4326762 4329536 R KEGG: mca:MCA2531 ATP-dependent helicase HepA; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SNF2-like protein complement(4326762..4329536) Methylomonas methanica MC09 10673924 YP_004514760.1 CDS Metme_3907 NC_015572.1 4329559 4332861 R PFAM: VanZ like protein; KEGG: nmu:Nmul_A2514 VanZ like protein; VanZ family protein complement(4329559..4332861) Methylomonas methanica MC09 10673925 YP_004514761.1 CDS Metme_3908 NC_015572.1 4332882 4333838 R KEGG: vsa:VSAL_I3048 hypothetical protein; hypothetical protein complement(4332882..4333838) Methylomonas methanica MC09 10673926 YP_004514762.1 CDS Metme_3909 NC_015572.1 4333851 4334465 R PFAM: Adenylylsulphate kinase, C-terminal; TIGRFAM: Adenylylsulphate kinase, C-terminal; HAMAP: Adenylyl-sulfate kinase; KEGG: cyn:Cyan7425_3345 adenylyl-sulfate kinase; adenylylsulfate kinase complement(4333851..4334465) Methylomonas methanica MC09 10673927 YP_004514763.1 CDS Metme_3910 NC_015572.1 4334535 4334858 R KEGG: gem:GM21_3716 hypothetical protein; hypothetical protein complement(4334535..4334858) Methylomonas methanica MC09 10673928 YP_004514764.1 CDS Metme_3911 NC_015572.1 4334868 4335698 R PFAM: Sulphur oxidation protein SoxZ; KEGG: mca:MCA0297 hypothetical protein; sulfur oxidation protein SoxZ complement(4334868..4335698) Methylomonas methanica MC09 10673929 YP_004514765.1 CDS Metme_3912 NC_015572.1 4335723 4336637 R KEGG: mca:MCA0298 metallo-beta-lactamase; metallo-beta-lactamase complement(4335723..4336637) Methylomonas methanica MC09 10673930 YP_004514766.1 CDS Metme_3913 NC_015572.1 4336646 4337176 R PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: npu:Npun_R6631 peptide deformylase; peptide deformylase complement(4336646..4337176) Methylomonas methanica MC09 10673931 YP_004514767.1 CDS Metme_3914 NC_015572.1 4337345 4337668 D KEGG: mca:MCA3107 hypothetical protein; hypothetical protein 4337345..4337668 Methylomonas methanica MC09 10673932 YP_004514768.1 CDS Metme_3915 NC_015572.1 4337713 4338036 R KEGG: mca:MCA2885 HesB/YadR/YfhF family protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein complement(4337713..4338036) Methylomonas methanica MC09 10673933 YP_004514769.1 CDS Metme_3916 NC_015572.1 4338049 4339155 R KEGG: mca:MCA2884 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase complement(4338049..4339155) Methylomonas methanica MC09 10673934 YP_004514770.1 CDS Metme_3917 NC_015572.1 4339156 4339641 R KEGG: mca:MCA2883 Rrf2 family protein; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2; BadM/Rrf2 family transcriptional regulator complement(4339156..4339641) Methylomonas methanica MC09 10673935 YP_004514771.1 CDS Metme_3918 NC_015572.1 4339727 4340476 R KEGG: mca:MCA2611 serine acetyltransferase; TIGRFAM: Serine O-acetyltransferase; serine O-acetyltransferase complement(4339727..4340476) Methylomonas methanica MC09 10673936 YP_004514772.1 CDS Metme_3919 NC_015572.1 4340482 4341201 R KEGG: mca:MCA2610 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU; TrmH family RNA methyltransferase, group 1 complement(4340482..4341201) Methylomonas methanica MC09 10673937 YP_004514773.1 CDS Metme_3920 NC_015572.1 4341304 4342089 D PFAM: Inositol monophosphatase; KEGG: mca:MCA2609 inositol monophosphatase; inositol monophosphatase 4341304..4342089 Methylomonas methanica MC09 10673938 YP_004514774.1 CDS Metme_3921 NC_015572.1 4342186 4343094 D KEGG: mca:MCA3019 methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; methylenetetrahydrofolate dehydrogenase 4342186..4343094 Methylomonas methanica MC09 10673939 YP_004514775.1 CDS Metme_3922 NC_015572.1 4343143 4344048 D KEGG: nhl:Nhal_3874 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; methylenetetrahydrofolate dehydrogenase 4343143..4344048 Methylomonas methanica MC09 10673940 YP_004514776.1 CDS Metme_3923 NC_015572.1 4344093 4344731 R KEGG: spe:Spro_1848 response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(4344093..4344731) Methylomonas methanica MC09 10673941 YP_004514777.1 CDS Metme_3924 NC_015572.1 4344903 4346612 D TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: mca:MCA2013 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding; prolyl-tRNA synthetase 4344903..4346612 Methylomonas methanica MC09 10673942 YP_004514778.1 CDS Metme_3925 NC_015572.1 4346682 4346852 R PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: mmi:MMAR_1293 rubredoxin RubB; rubredoxin-type Fe(Cys)4 protein complement(4346682..4346852) Methylomonas methanica MC09 10673943 YP_004514779.1 CDS Metme_3926 NC_015572.1 4347138 4349081 R KEGG: psl:Psta_1811 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; ImpA family type VI secretion-associated protein complement(4347138..4349081) Methylomonas methanica MC09 10673944 YP_004514780.1 CDS Metme_3927 NC_015572.1 4349135 4349428 R PFAM: PAAR motif; KEGG: fjo:Fjoh_3156 PaaR repeat-containing protein; PAAR repeat-containing protein complement(4349135..4349428) Methylomonas methanica MC09 10673945 YP_004514781.1 CDS Metme_3928 NC_015572.1 4349448 4350041 R KEGG: sus:Acid_0241 secreted protein; secreted protein complement(4349448..4350041) Methylomonas methanica MC09 10673946 YP_004514782.1 CDS Metme_3929 NC_015572.1 4350062 4351399 R PFAM: Methyltransferase type 11; Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: lch:Lcho_4081 methyltransferase type 12; type 11 methyltransferase complement(4350062..4351399) Methylomonas methanica MC09 10673947 YP_004514783.1 CDS Metme_3930 NC_015572.1 4351684 4352673 D KEGG: reu:Reut_A0065 Mg2+ transporter protein, CorA-like; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 4351684..4352673 Methylomonas methanica MC09 10673948 YP_004514784.1 CDS Metme_3931 NC_015572.1 4352822 4355239 R PFAM: Protein of unknown function DUF214, permase predicted; KEGG: rrs:RoseRS_1075 hypothetical protein; hypothetical protein complement(4352822..4355239) Methylomonas methanica MC09 10673949 YP_004514785.1 CDS Metme_3932 NC_015572.1 4355241 4355936 R SMART: ATPase, AAA+ type, core; manually curated; KEGG: rrs:RoseRS_3212 cyclic nucleotide-binding protein; PFAM: ABC transporter-like; phosphonate-transporting ATPase complement(4355241..4355936) Methylomonas methanica MC09 10673950 YP_004514786.1 CDS Metme_3933 NC_015572.1 4356017 4356589 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: xcb:XC_0112 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 4356017..4356589 Methylomonas methanica MC09 10673951 YP_004514787.1 CDS Metme_3934 NC_015572.1 4356615 4356971 R hypothetical protein complement(4356615..4356971) Methylomonas methanica MC09 10673952 YP_004514788.1 CDS Metme_3935 NC_015572.1 4357198 4357587 D PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, QueF; HAMAP: Nitrile oxidoreductase, NADPH-dependent, QueF; KEGG: nhl:Nhal_1446 7-cyano-7-deazaguanine reductase; NADPH-dependent 7-cyano-7-deazaguanine reductase 4357198..4357587 Methylomonas methanica MC09 10673953 YP_004514789.1 CDS Metme_3936 NC_015572.1 4357594 4357878 D PFAM: Type III secretion exporter; KEGG: hch:HCH_04371 flagellar protein FhlB cytoplasmic domain-containing protein; type III secretion exporter 4357594..4357878 Methylomonas methanica MC09 10673954 YP_004514790.1 CDS Metme_3937 NC_015572.1 4357875 4358732 D TIGRFAM: Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; KEGG: pfl:PFL_0552 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase proenzyme 4357875..4358732 Methylomonas methanica MC09 10673955 YP_004514791.1 CDS Metme_3938 NC_015572.1 4358856 4359203 D KEGG: mca:MCA0682 preprotein translocase YajC subunit; TIGRFAM: YajC; PFAM: YajC; preprotein translocase subunit YajC 4358856..4359203 Methylomonas methanica MC09 10673956 YP_004514792.1 CDS Metme_3939 NC_015572.1 4359281 4361128 D KEGG: mca:MCA0683 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD 4359281..4361128 Methylomonas methanica MC09 10673957 YP_004514793.1 CDS Metme_3940 NC_015572.1 4361183 4361614 D SMART: Nucleoside diphosphate kinase, core; HAMAP: Nucleoside diphosphate kinase; KEGG: pmy:Pmen_3504 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core; nucleoside diphosphate kinase 4361183..4361614 Methylomonas methanica MC09 10673958 YP_004514794.1 CDS Metme_3941 NC_015572.1 4361589 4362704 D TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: mca:MCA2887 hypothetical protein; PFAM: Radical SAM; ribosomal RNA large subunit methyltransferase N 4361589..4362704 Methylomonas methanica MC09 10673959 YP_004514795.1 CDS Metme_3942 NC_015572.1 4362694 4363464 D TIGRFAM: Pilus biogenesis/stability type IV, PilW; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: mca:MCA2888 type IV pilus biogenesis protein PilF, SMART: Tetratricopeptide repeat; type IV pilus biogenesis/stability protein PilW 4362694..4363464 Methylomonas methanica MC09 10673960 YP_004514796.1 CDS Metme_3943 NC_015572.1 4363482 4364780 D PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: mca:MCA2889 histidyl-tRNA synthetase; histidyl-tRNA synthetase 4363482..4364780 Methylomonas methanica MC09 10673961 YP_004514797.1 CDS Metme_3944 NC_015572.1 4364800 4365462 D PFAM: Protein of unknown function DUF2133; KEGG: mca:MCA2890 hypothetical protein; hypothetical protein 4364800..4365462 Methylomonas methanica MC09 10673962 YP_004514798.1 CDS Metme_3945 NC_015572.1 4365476 4366690 D TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat; KEGG: mca:MCA2891 lipoprotein; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; outer membrane assembly lipoprotein YfgL 4365476..4366690 Methylomonas methanica MC09 10673963 YP_004514799.1 CDS Metme_3946 NC_015572.1 4366696 4368087 D TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; HAMAP: GTP-binding, EngA; KEGG: mca:MCA2892 GTPase; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engA 4366696..4368087 Methylomonas methanica MC09 10673964 YP_004514800.1 CDS Metme_3947 NC_015572.1 4368109 4368615 D KEGG: mep:MPQ_1757 redoxin domain protein; HAMAP: thiol peroxidase; PFAM: Redoxin; thiol peroxidase 4368109..4368615 Methylomonas methanica MC09 10673965 YP_004514801.1 CDS Metme_3948 NC_015572.1 4368663 4369433 D KEGG: hch:HCH_01514 hypothetical protein; hypothetical protein 4368663..4369433 Methylomonas methanica MC09 10673966 YP_004514802.1 CDS Metme_3949 NC_015572.1 4369494 4370123 R KEGG: mpo:Mpop_1750 formiminotransferase-cyclodeaminase; PFAM: Cyclodeaminase/cyclohydrolase; methenyltetrahydrofolate cyclohydrolase complement(4369494..4370123) Methylomonas methanica MC09 10673967 YP_004514803.1 CDS Metme_3950 NC_015572.1 4370233 4371648 R TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: mca:MCA0509 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; cysteinyl-tRNA synthetase complement(4370233..4371648) Methylomonas methanica MC09 10673968 YP_004514804.1 CDS Metme_3951 NC_015572.1 4371718 4372299 D PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: mca:MCA0516 peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase 4371718..4372299 Methylomonas methanica MC09 10673969 YP_004514805.1 CDS Metme_3952 NC_015572.1 4372250 4373077 D TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; HAMAP: UDP-2,3-diacylglucosamine hydrolase; KEGG: mca:MCA1318 UDP-2,3-diacylglucosamine hydrolase; PFAM: Metallophosphoesterase; UDP-2,3-diacylglucosamine hydrolase 4372250..4373077 Methylomonas methanica MC09 10673970 YP_004514806.1 CDS Metme_3953 NC_015572.1 4373201 4373401 R KEGG: ttu:TERTU_2904 hypothetical protein; hypothetical protein complement(4373201..4373401) Methylomonas methanica MC09 10673971 YP_004514807.1 CDS Metme_3954 NC_015572.1 4373411 4374688 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mca:MCA2155 sulfide-quinone reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4373411..4374688) Methylomonas methanica MC09 10673972 YP_004514808.1 CDS Metme_3955 NC_015572.1 4374905 4375300 D PFAM: Methionine sulphoxide reductase B; TIGRFAM: Methionine sulphoxide reductase B; HAMAP: Peptide methionine sulfoxide reductase msrB; KEGG: pmy:Pmen_2521 methionine sulfoxide reductase B; peptide methionine sulfoxide reductase 4374905..4375300 Methylomonas methanica MC09 10673973 YP_004514809.1 CDS Metme_3956 NC_015572.1 4375297 4376601 D KEGG: net:Neut_1358 aminopeptidase 2; PFAM: Peptidase M18, aminopeptidase I; aspartyl aminopeptidase 4375297..4376601 Methylomonas methanica MC09 10673974 YP_004514810.1 CDS Metme_3957 NC_015572.1 4376659 4377228 D KEGG: hch:HCH_02557 hypothetical protein; hypothetical protein 4376659..4377228 Methylomonas methanica MC09 10673975 YP_004514811.1 CDS Metme_3958 NC_015572.1 4377225 4379585 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain; PAS fold-3; KEGG: nwa:Nwat_2894 PAS/PAC sensor(S)-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4377225..4379585 Methylomonas methanica MC09 10673976 YP_004514812.1 CDS Metme_3959 NC_015572.1 4379594 4381711 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: cja:CJA_0755 TonB-dependent receptor; TonB-dependent receptor 4379594..4381711 Methylomonas methanica MC09 10673977 YP_004514813.1 CDS Metme_3960 NC_015572.1 4381722 4382129 R KEGG: NarL family two-component response regulator; hypothetical protein complement(4381722..4382129) Methylomonas methanica MC09 10673978 YP_004514814.1 CDS Metme_3961 NC_015572.1 4382220 4382996 R TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: mca:MCA0397 UDP-N-acetylglucosamine acyltransferase; PFAM: Bacterial transferase hexapeptide repeat; acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase complement(4382220..4382996) Methylomonas methanica MC09 10673979 YP_004514815.1 CDS Metme_3962 NC_015572.1 4383000 4383887 R TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: mca:MCA0396 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; Tyrosine recombinase xerD complement(4383000..4383887) Methylomonas methanica MC09 10673980 YP_004514816.1 CDS Metme_3963 NC_015572.1 4383884 4384393 R KEGG: slt:Slit_2735 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase complement(4383884..4384393) Methylomonas methanica MC09 10673981 YP_004514817.1 CDS Metme_3964 NC_015572.1 4384486 4384833 R TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: tgr:Tgr7_0849 ribosomal protein L19; PFAM: Ribosomal protein L19; 50S ribosomal protein L19 complement(4384486..4384833) Methylomonas methanica MC09 10673982 YP_004514818.1 CDS Metme_3965 NC_015572.1 4384826 4385587 R PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: mca:MCA0394 tRNA (guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase complement(4384826..4385587) Methylomonas methanica MC09 10673983 YP_004514819.1 CDS Metme_3966 NC_015572.1 4385594 4386103 R PFAM: RimM protein; PRC-barrel; manually curated; TIGRFAM: 16S rRNA processing protein RimM; KEGG: alv:Alvin_2484 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; Ribosome maturation factor rimM complement(4385594..4386103) Methylomonas methanica MC09 10673984 YP_004514820.1 CDS Metme_3967 NC_015572.1 4386109 4386360 R TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: swp:swp_3768 30S ribosomal protein S16; PFAM: Ribosomal protein S16; 30S ribosomal protein S16 complement(4386109..4386360) Methylomonas methanica MC09 10673985 YP_004514821.1 CDS Metme_3968 NC_015572.1 4386436 4387791 R TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: mca:MCA1338 signal recognition particle protein; SMART: ATPase, AAA+ type, core; signal recognition particle protein complement(4386436..4387791) Methylomonas methanica MC09 10673986 YP_004514822.1 CDS Metme_3969 NC_015572.1 4387921 4388721 D PFAM: Cytochrome c assembly protein; KEGG: mca:MCA1337 hypothetical protein; cytochrome c assembly protein 4387921..4388721 Methylomonas methanica MC09 10673987 YP_004514823.1 CDS Metme_3970 NC_015572.1 4388725 4388925 R hypothetical protein complement(4388725..4388925) Methylomonas methanica MC09 10673988 YP_004514824.1 CDS Metme_3971 NC_015572.1 4388989 4391499 R PFAM: Protein of unknown function DUF115; KEGG: gme:Gmet_0447 TPR repeat-containing protein; hypothetical protein complement(4388989..4391499) Methylomonas methanica MC09 10673989 YP_004514825.1 CDS Metme_3972 NC_015572.1 4391521 4392375 R PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: hna:Hneap_0622 flagellin domain protein; flagellin domain-containing protein complement(4391521..4392375) Methylomonas methanica MC09 10673990 YP_004514826.1 CDS Metme_3973 NC_015572.1 4392871 4393947 R SMART: Signal transduction response regulator, receiver region; HAMAP: Chemotaxis response regulator protein-glutamate methylesterase; KEGG: mep:MPQ_2641 response regulator receiver modulated CheB methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver region; response regulator receiver modulated CheB methylesterase complement(4392871..4393947) Methylomonas methanica MC09 10673991 YP_004514827.1 CDS Metme_3974 NC_015572.1 4393960 4394472 R manually curated; HAMAP: Chemoreceptor glutamine deamidase cheD; KEGG: tmz:Tmz1t_1321 CheD, stimulates methylation of MCP protein; protein CheD complement(4393960..4394472) Methylomonas methanica MC09 10673992 YP_004514828.1 CDS Metme_3975 NC_015572.1 4394453 4395316 R PFAM: MCP methyltransferase, CheR-type; KEGG: psb:Psyr_0783 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase, CheR-type; chemotaxis protein CheR complement(4394453..4395316) Methylomonas methanica MC09 10673993 YP_004514829.1 CDS Metme_3976 NC_015572.1 4395303 4395854 R KEGG: app:CAP2UW1_3443 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW complement(4395303..4395854) Methylomonas methanica MC09 10673994 YP_004514830.1 CDS Metme_3977 NC_015572.1 4395866 4399399 R KEGG: gem:GM21_1280 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer complement(4395866..4399399) Methylomonas methanica MC09 10673995 YP_004514831.1 CDS Metme_3978 NC_015572.1 4399430 4401637 R KEGG: slt:Slit_1588 CheA signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimeric; CheW-like protein; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like; CheA signal transduction histidine kinase complement(4399430..4401637) Methylomonas methanica MC09 10673996 YP_004514832.1 CDS Metme_3979 NC_015572.1 4401643 4401936 R KEGG: rcu:RCOM_0025820 hypothetical protein; hypothetical protein complement(4401643..4401936) Methylomonas methanica MC09 10673997 YP_004514833.1 CDS Metme_3980 NC_015572.1 4401982 4402350 R KEGG: psp:PSPPH_0807 chemotaxis protein CheY; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein complement(4401982..4402350) Methylomonas methanica MC09 10673998 YP_004514834.1 CDS Metme_3981 NC_015572.1 4402362 4403435 R KEGG: rfr:Rfer_0898 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer complement(4402362..4403435) Methylomonas methanica MC09 10673999 YP_004514835.1 CDS Metme_3982 NC_015572.1 4404042 4404443 R PFAM: Flagellar protein FlaG protein; KEGG: azo:azo2705 flagellar protein; flagellar protein FlaG protein complement(4404042..4404443) Methylomonas methanica MC09 10674000 YP_004514836.1 CDS Metme_3983 NC_015572.1 4404835 4406049 D KEGG: slt:Slit_2536 hypothetical protein; hypothetical protein 4404835..4406049 Methylomonas methanica MC09 10674001 YP_004514837.1 CDS Metme_3984 NC_015572.1 4406074 4407180 D HAMAP: Phosphoserine aminotransferase; KEGG: slt:Slit_2537 phosphoserine transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase; phosphoserine aminotransferase 4406074..4407180 Methylomonas methanica MC09 10674002 YP_004514838.1 CDS Metme_3986 NC_015572.1 4407552 4407938 R KEGG: cja:CJA_1701 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS; flagellar protein FliS complement(4407552..4407938) Methylomonas methanica MC09 10674004 YP_004514839.1 CDS Metme_3987 NC_015572.1 4407956 4409371 R PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; KEGG: hna:Hneap_0624 flagellar hook-associated 2 domain protein; flagellar hook-associated 2 domain-containing protein complement(4407956..4409371) Methylomonas methanica MC09 10674005 YP_004514840.1 CDS Metme_3988 NC_015572.1 4409399 4409824 R PFAM: Flagellar protein FlaG protein; KEGG: alv:Alvin_1952 flagellar protein FlaG protein; flagellar protein FlaG protein complement(4409399..4409824) Methylomonas methanica MC09 10674006 YP_004514841.1 CDS Metme_3989 NC_015572.1 4409891 4410739 R PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: hna:Hneap_0622 flagellin domain protein; flagellin domain-containing protein complement(4409891..4410739) Methylomonas methanica MC09 10674007 YP_004514842.1 CDS Metme_3990 NC_015572.1 4410996 4412039 R TIGRFAM: Pseudaminic acid biosynthesis, PseI; KEGG: nhl:Nhal_0399 N-acylneuraminate-9-phosphate synthase; PFAM: N-acetylneuraminic acid synthase, N-terminal; SAF domain; pseudaminic acid synthase complement(4410996..4412039) Methylomonas methanica MC09 10674008 YP_004514843.1 CDS Metme_3991 NC_015572.1 4412106 4413323 R PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; KEGG: apr:Apre_1270 protein of unknown function DUF201; ATP-dependent carboxylate-amine ligase domain-containing protein complement(4412106..4413323) Methylomonas methanica MC09 10674009 YP_004514844.1 CDS Metme_3992 NC_015572.1 4413320 4414801 R KEGG: mmg:MTBMA_c02530 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulpholactate synthase, ComA; 2-phosphosulpholactate phosphatase; phosphosulfolactate synthase complement(4413320..4414801) Methylomonas methanica MC09 10674010 YP_004514845.1 CDS Metme_3993 NC_015572.1 4414815 4415729 R PFAM: Methyltransferase type 11; KEGG: dsa:Desal_3707 methyltransferase type 12; type 11 methyltransferase complement(4414815..4415729) Methylomonas methanica MC09 10674011 YP_004514846.1 CDS Metme_3994 NC_015572.1 4415826 4416866 R TIGRFAM: Pseudaminic acid biosynthesis-associated protein PseG; KEGG: pde:Pden_3551 flagellin modification protein FlmD; pseudaminic acid biosynthesis-associated protein PseG complement(4415826..4416866) Methylomonas methanica MC09 10674012 YP_004514847.1 CDS Metme_3995 NC_015572.1 4416880 4417584 R TIGRFAM: Pseudaminic acid biosynthesis, PseF; KEGG: aeh:Mlg_2324 acylneuraminate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; pseudaminic acid CMP-transferase complement(4416880..4417584) Methylomonas methanica MC09 10674013 YP_004514848.1 CDS Metme_3996 NC_015572.1 4417619 4418773 R KEGG: har:HEAR1121 polysaccharide biosynthesis protein; TIGRFAM: Pseudaminic acid biosynthesis, PseC; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase complement(4417619..4418773) Methylomonas methanica MC09 10674014 YP_004514849.1 CDS Metme_3997 NC_015572.1 4418780 4419769 R KEGG: nhl:Nhal_0393 polysaccharide biosynthesis protein CapD; TIGRFAM: Pseudaminic acid biosynthesis, PseB; PFAM: Polysaccharide biosynthesis protein CapD-like; UDP-N-acetylglucosamine 4,6-dehydratase complement(4418780..4419769) Methylomonas methanica MC09 10674015 YP_004514850.1 CDS Metme_3998 NC_015572.1 4419929 4421353 R PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: nhl:Nhal_0697 RNA-metabolising metallo-beta-lactamase; RNA-metabolising metallo-beta-lactamase complement(4419929..4421353) Methylomonas methanica MC09 10674016 YP_004514851.1 CDS Metme_3999 NC_015572.1 4421568 4422173 D KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein 4421568..4422173 Methylomonas methanica MC09 10674017 YP_004514852.1 CDS Metme_4000 NC_015572.1 4422259 4422969 D hypothetical protein 4422259..4422969 Methylomonas methanica MC09 10674018 YP_004514853.1 CDS Metme_4001 NC_015572.1 4423133 4425916 R KEGG: mca:MCA1306 DnaK-related protein; molecular chaperone DnaK complement(4423133..4425916) Methylomonas methanica MC09 10674019 YP_004514854.1 CDS Metme_4002 NC_015572.1 4426216 4427124 D TIGRFAM: variant PEP-CTERM exosortase signal; PFAM: PEP-CTERM bacterial; Peptidase, C-terminal, archaeal/bacterial; variant PEP-CTERM exosortase signal 4426216..4427124 Methylomonas methanica MC09 10674020 YP_004514855.1 CDS Metme_4003 NC_015572.1 4427172 4428347 R PFAM: Radical SAM; KEGG: tbd:Tbd_0071 elongator protein 3/MiaB/NifB; radical SAM protein complement(4427172..4428347) Methylomonas methanica MC09 10674021 YP_004514856.1 CDS Metme_4004 NC_015572.1 4428349 4428828 R SMART: Transcription regulator, AsnC-type; KEGG: tbd:Tbd_0072 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(4428349..4428828) Methylomonas methanica MC09 10674022 YP_004514857.1 CDS Metme_4005 NC_015572.1 4428828 4429271 R KEGG: mag:amb1405 transcriptional regulator; AsnC family transcriptional regulator complement(4428828..4429271) Methylomonas methanica MC09 10674023 YP_004514858.1 CDS Metme_4006 NC_015572.1 4429264 4429773 R KEGG: tbd:Tbd_0074 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(4429264..4429773) Methylomonas methanica MC09 10674024 YP_004514859.1 CDS Metme_4007 NC_015572.1 4429766 4430221 R KEGG: tbd:Tbd_0074 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(4429766..4430221) Methylomonas methanica MC09 10674025 YP_004514860.1 CDS Metme_4008 NC_015572.1 4430225 4431403 R PFAM: Cytochrome d1, haem region; KEGG: psa:PST_3527 heme d1 biosynthesis protein NirF; cytochrome d1 heme subunit complement(4430225..4431403) Methylomonas methanica MC09 10674026 YP_004514861.1 CDS Metme_4009 NC_015572.1 4431487 4431903 R KEGG: vcj:VCD_000926 hypothetical protein; hypothetical protein complement(4431487..4431903) Methylomonas methanica MC09 10674027 YP_004514862.1 CDS Metme_4010 NC_015572.1 4431900 4432208 R KEGG: app:CAP2UW1_2487 hypothetical protein; hypothetical protein complement(4431900..4432208) Methylomonas methanica MC09 10674028 YP_004514863.1 CDS Metme_4011 NC_015572.1 4432212 4432520 R PFAM: Cytochrome c, class I; KEGG: bmj:BMULJ_02318 cytochrome c553; cytochrome c class I complement(4432212..4432520) Methylomonas methanica MC09 10674029 YP_004514864.1 CDS Metme_4012 NC_015572.1 4432517 4434097 R PFAM: Cytochrome d1, haem region; KEGG: rme:Rmet_3331 cytochrome d1, heme region; cytochrome d1 heme subunit complement(4432517..4434097) Methylomonas methanica MC09 10674030 YP_004514865.1 CDS Metme_4013 NC_015572.1 4434285 4434866 D KEGG: nhl:Nhal_2066 regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; regulatory protein MarR 4434285..4434866 Methylomonas methanica MC09 10674031 YP_004514866.1 CDS Metme_4014 NC_015572.1 4434909 4435943 D PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: alv:Alvin_0812 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 4434909..4435943 Methylomonas methanica MC09 10674032 YP_004514867.1 CDS Metme_4015 NC_015572.1 4435940 4436230 D PFAM: Nucleotidyltransferase; KEGG: app:CAP2UW1_0719 DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein 4435940..4436230 Methylomonas methanica MC09 10674033 YP_004514868.1 CDS Metme_4016 NC_015572.1 4436223 4436582 D PFAM: Protein of unknown function DUF86; KEGG: slt:Slit_1851 protein of unknown function DUF86; hypothetical protein 4436223..4436582 Methylomonas methanica MC09 10674034 YP_004514869.1 CDS Metme_4017 NC_015572.1 4436579 4437370 D SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: aeh:Mlg_0267 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; ribosomal RNA small subunit methyltransferase A 4436579..4437370 Methylomonas methanica MC09 10674035 YP_004514870.1 CDS Metme_4018 NC_015572.1 4437760 4438638 D hypothetical protein 4437760..4438638 Methylomonas methanica MC09 10674036 YP_004514871.1 CDS Metme_4019 NC_015572.1 4439109 4439747 D TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: tgr:Tgr7_0354 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region; adenylate kinase 4439109..4439747 Methylomonas methanica MC09 10674037 YP_004514872.1 CDS Metme_4020 NC_015572.1 4439781 4441190 D PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: mca:MCA2065 isopropylmalate isomerase large subunit; 3-isopropylmalate dehydratase large subunit 4439781..4441190 Methylomonas methanica MC09 10674038 YP_004514873.1 CDS Metme_4021 NC_015572.1 4441267 4441905 D TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: mca:MCA2064 isopropylmalate isomerase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; 3-isopropylmalate dehydratase small subunit 4441267..4441905 Methylomonas methanica MC09 10674039 YP_004514874.1 CDS Metme_4022 NC_015572.1 4441923 4443002 D PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; KEGG: mca:MCA2063 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 4441923..4443002 Methylomonas methanica MC09 10674040 YP_004514875.1 CDS Metme_4023 NC_015572.1 4443008 4444030 D TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: tgr:Tgr7_1248 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding; aspartate-semialdehyde dehydrogenase 4443008..4444030 Methylomonas methanica MC09 10674041 YP_004514876.1 CDS Metme_4024 NC_015572.1 4444068 4446848 D TIGRFAM: Motility protein FimV, C-terminal; Motility protein FimV, N-terminal; KEGG: pag:PLES_19441 motility protein FimV; Motility protein FimV 4444068..4446848 Methylomonas methanica MC09 10674042 YP_004514877.1 CDS Metme_4025 NC_015572.1 4447545 4448600 D KEGG: tcx:Tcr_2179 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 4447545..4448600 Methylomonas methanica MC09 10674043 YP_004514878.1 CDS Metme_4026 NC_015572.1 4448635 4453059 D KEGG: tcx:Tcr_2180 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Extracellular solute-binding protein, family 3; PAC motif; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase 4448635..4453059 Methylomonas methanica MC09 10674044 YP_004514879.1 CDS Metme_4027 NC_015572.1 4453072 4453734 R PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; KEGG: tgr:Tgr7_1433 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(4453072..4453734) Methylomonas methanica MC09 10674045 YP_004514880.1 CDS Metme_4028 NC_015572.1 4453737 4454486 R PFAM: Survival protein SurE-like phosphatase/nucleotidase; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: mca:MCA2418 stationary phase survival protein SurE; multifunctional protein surE complement(4453737..4454486) Methylomonas methanica MC09 10674046 YP_004514881.1 CDS Metme_4029 NC_015572.1 4454550 4455119 D KEGG: noc:Noc_1906 Smr protein/MutS2-like; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal; Smr protein/MutS2 4454550..4455119 Methylomonas methanica MC09 10674047 YP_004514882.1 CDS Metme_4030 NC_015572.1 4455128 4455646 D KEGG: dar:Daro_3867 hypothetical protein; hypothetical protein 4455128..4455646 Methylomonas methanica MC09 10674048 YP_004514883.1 CDS Metme_4031 NC_015572.1 4455824 4456375 D KEGG: pha:PSHAa1467 hypothetical protein; hypothetical protein 4455824..4456375 Methylomonas methanica MC09 10674049 YP_004514884.1 CDS Metme_4032 NC_015572.1 4456511 4456822 D KEGG: ssm:Spirs_2005 hypothetical protein; hypothetical protein 4456511..4456822 Methylomonas methanica MC09 10674050 YP_004514885.1 CDS Metme_4033 NC_015572.1 4456843 4457490 D KEGG: rha:RHA1_ro04983 hypothetical protein; hypothetical protein 4456843..4457490 Methylomonas methanica MC09 10674051 YP_004514886.1 CDS Metme_4034 NC_015572.1 4457554 4458369 R KEGG: vpa:VP1254 hypothetical protein; hypothetical protein complement(4457554..4458369) Methylomonas methanica MC09 10674052 YP_004514887.1 CDS Metme_4035 NC_015572.1 4458514 4459638 D PFAM: Lytic transglycosylase-like, catalytic; KEGG: lytic transglycosylase catalytic; lytic transglycosylase catalytic subunit 4458514..4459638 Methylomonas methanica MC09 10674053 YP_004514888.1 CDS Metme_4036 NC_015572.1 4459635 4462928 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; CHASE; MASE1; PAS fold; KEGG: gca:Galf_1970 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase complement(4459635..4462928) Methylomonas methanica MC09 10674054 YP_004514889.1 CDS Metme_4037 NC_015572.1 4463114 4463587 R PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: tcx:Tcr_0178 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(4463114..4463587) Methylomonas methanica MC09 10674055 YP_004514890.1 CDS Metme_4038 NC_015572.1 4463593 4464159 R KEGG: sus:Acid_0536 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(4463593..4464159) Methylomonas methanica MC09 10674056 YP_004514891.1 CDS Metme_4039 NC_015572.1 4464156 4464518 R SMART: HNH nuclease; KEGG: sfr:Sfri_1362 hypothetical protein; HNH nuclease complement(4464156..4464518) Methylomonas methanica MC09 10674057 YP_004514892.1 CDS Metme_4040 NC_015572.1 4464536 4465543 R SMART: Elongator protein 3/MiaB/NifB; manually curated; KEGG: mca:MCA1949 molybdenum cofactor biosynthesis protein A; TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; molybdenum cofactor biosynthesis protein A complement(4464536..4465543) Methylomonas methanica MC09 10674058 YP_004514893.1 CDS Metme_4041 NC_015572.1 4465812 4466159 D hypothetical protein 4465812..4466159 Methylomonas methanica MC09 10674059 YP_004514894.1 CDS Metme_4042 NC_015572.1 4466345 4467310 D KEGG: azl:AZL_a05750 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 4466345..4467310 Methylomonas methanica MC09 10674060 YP_004514895.1 CDS Metme_4043 NC_015572.1 4467310 4468068 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: psa:PST_2932 sulfonate ABC transporter, permease; ABC transporter permease 4467310..4468068 Methylomonas methanica MC09 10674061 YP_004514896.1 CDS Metme_4044 NC_015572.1 4468065 4468808 D PFAM: ABC transporter-like; KEGG: hdn:Hden_1465 ABC transporter related protein; SMART: ATPase, AAA+ type, core; taurine-transporting AtPase 4468065..4468808 Methylomonas methanica MC09 10674062 YP_004514897.1 CDS Metme_4045 NC_015572.1 4468810 4469370 D PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: mfa:Mfla_1667 hypothetical protein; hypothetical protein 4468810..4469370 Methylomonas methanica MC09 10674063 YP_004514898.1 CDS Metme_4046 NC_015572.1 4469527 4469688 D hypothetical protein 4469527..4469688 Methylomonas methanica MC09 10674064 YP_004514899.1 CDS Metme_4047 NC_015572.1 4469792 4471594 R SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, lipid A export, MsbA; KEGG: avn:Avin_44710 lipid A export ATP-binding/permease MsbA; PFAM: ABC transporter-like; ABC transporter, transmembrane region; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA complement(4469792..4471594) Methylomonas methanica MC09 10674065 YP_004514900.1 CDS Metme_4048 NC_015572.1 4471645 4472760 D PFAM: Glycosyl transferase, family 9; KEGG: bmj:BMULJ_02299 heptosyltransferase III; glycosyl transferase family protein 4471645..4472760 Methylomonas methanica MC09 10674066 YP_004514901.1 CDS Metme_4049 NC_015572.1 4472811 4473533 D PFAM: Glycosyl transferase, family 25; KEGG: vsp:VS_0190 glycosyltransferase; glycosyl transferase family protein 4472811..4473533 Methylomonas methanica MC09 10674067 YP_004514902.1 CDS Metme_4050 NC_015572.1 4473548 4474768 D PFAM: O-antigen ligase-related; KEGG: meh:M301_2021 O-antigen polymerase; O-antigen polymerase 4473548..4474768 Methylomonas methanica MC09 10674068 YP_004514903.1 CDS Metme_4051 NC_015572.1 4474813 4475643 D PFAM: Glycosyl transferase, family 2; KEGG: gsu:GSU2254 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 4474813..4475643 Methylomonas methanica MC09 10674069 YP_004514904.1 CDS Metme_4052 NC_015572.1 4475646 4476476 D PFAM: Glycosyl transferase, family 2; KEGG: rpi:Rpic_2399 glycosyl transferase 2; family 2 glycosyl transferase 4475646..4476476 Methylomonas methanica MC09 10674070 YP_004514905.1 CDS Metme_4053 NC_015572.1 4476485 4476901 R KEGG: tgr:Tgr7_1349 hypothetical protein; hypothetical protein complement(4476485..4476901) Methylomonas methanica MC09 10674071 YP_004514906.1 CDS Metme_4054 NC_015572.1 4476901 4477074 R hypothetical protein complement(4476901..4477074) Methylomonas methanica MC09 10674072 YP_004514907.1 CDS Metme_4055 NC_015572.1 4477098 4477571 R KEGG: cja:CJA_2132 CheW; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW complement(4477098..4477571) Methylomonas methanica MC09 10674073 YP_004514908.1 CDS Metme_4056 NC_015572.1 4477590 4478297 R KEGG: tgr:Tgr7_1346 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW complement(4477590..4478297) Methylomonas methanica MC09 10674074 YP_004514909.1 CDS Metme_4057 NC_015572.1 4478294 4479097 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mmw:Mmwyl1_3421 cobyrinic acid ac-diamide synthase; Cobyrinic acid ac-diamide synthase complement(4478294..4479097) Methylomonas methanica MC09 10674075 YP_004514910.1 CDS Metme_4058 NC_015572.1 4479094 4480011 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nhl:Nhal_3607 OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(4479094..4480011) Methylomonas methanica MC09 10674076 YP_004514911.1 CDS Metme_4059 NC_015572.1 4480024 4480770 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: ppg:PputGB1_3905 flagellar motor protein; MotA/TolQ/ExbB proton channel complement(4480024..4480770) Methylomonas methanica MC09 10674077 YP_004514912.1 CDS Metme_4060 NC_015572.1 4480982 4483180 R KEGG: psa:PST_2566 chemotaxis histidine kinase CheA; PFAM: CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheA signal transduction histidine kinase complement(4480982..4483180) Methylomonas methanica MC09 10674078 YP_004514913.1 CDS Metme_4061 NC_015572.1 4483191 4483913 R PFAM: Chemotaxis phosphatase, CheZ; KEGG: tgr:Tgr7_1340 chemotaxis phosphatase, CheZ; chemotaxis protein CheZ complement(4483191..4483913) Methylomonas methanica MC09 10674079 YP_004514914.1 CDS Metme_4062 NC_015572.1 4483931 4484305 R KEGG: aeh:Mlg_0986 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein complement(4483931..4484305) Methylomonas methanica MC09 10674080 YP_004514915.1 CDS Metme_4063 NC_015572.1 4484403 4485134 R KEGG: nhl:Nhal_3609 RNA polymerase sigma factor, FliA/WhiG family; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; RNA polymerase sigma-28 subunit FliA/WhiG complement(4484403..4485134) Methylomonas methanica MC09 10674081 YP_004514916.1 CDS Metme_4064 NC_015572.1 4485146 4486018 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: nhl:Nhal_3610 cobyrinic acid ac-diamide synthase; Cobyrinic acid ac-diamide synthase complement(4485146..4486018) Methylomonas methanica MC09 10674082 YP_004514917.1 CDS Metme_4065 NC_015572.1 4486011 4487426 R TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: aha:AHA_1380 flagellar biosynthesis protein FlhF; SMART: ATPase, AAA+ type, core; flagellar biosynthetic protein FlhF complement(4486011..4487426) Methylomonas methanica MC09 10674083 YP_004514918.1 CDS Metme_4066 NC_015572.1 4487446 4489551 R KEGG: tgr:Tgr7_1335 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP; flagellar biosynthesis protein FlhA complement(4487446..4489551) Methylomonas methanica MC09 10674084 YP_004514919.1 CDS Metme_4067 NC_015572.1 4489570 4490697 R KEGG: tgr:Tgr7_1334 flagellar biosynthetic protein FlhB; TIGRFAM: Flagellar biosynthetic protein FlhB; PFAM: Type III secretion exporter; flagellar biosynthetic protein FlhB complement(4489570..4490697) Methylomonas methanica MC09 10674085 YP_004514920.1 CDS Metme_4068 NC_015572.1 4490697 4491473 R KEGG: tgr:Tgr7_1333 flagellar biosynthetic protein FliR; TIGRFAM: Flagellar biosynthesis protein FliR; PFAM: Type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR complement(4490697..4491473) Methylomonas methanica MC09 10674086 YP_004514921.1 CDS Metme_4069 NC_015572.1 4491470 4491739 R KEGG: hna:Hneap_0711 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3; flagellar biosynthetic protein FliQ complement(4491470..4491739) Methylomonas methanica MC09 10674087 YP_004514922.1 CDS Metme_4070 NC_015572.1 4491756 4492511 R KEGG: alv:Alvin_2932 flagellar biosynthetic protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP complement(4491756..4492511) Methylomonas methanica MC09 10674088 YP_004514923.1 CDS Metme_4071 NC_015572.1 4492504 4492944 R KEGG: tcx:Tcr_0739 flagellar biosynthesis protein, FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO; flagellar biosynthetic protein FliO complement(4492504..4492944) Methylomonas methanica MC09 10674089 YP_004514924.1 CDS Metme_4072 NC_015572.1 4492944 4493396 R KEGG: hch:HCH_05180 flagellar motor switch protein; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA); flagellar motor switch protein FliN complement(4492944..4493396) Methylomonas methanica MC09 10674090 YP_004514925.1 CDS Metme_4073 NC_015572.1 4493417 4494397 R KEGG: tgr:Tgr7_1328 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); flagellar motor switch protein FliM complement(4493417..4494397) Methylomonas methanica MC09 10674091 YP_004514926.1 CDS Metme_4074 NC_015572.1 4494398 4494919 R PFAM: Flagellar basal body-associated protein FliL; KEGG: mmb:Mmol_0933 flagellar basal body-associated protein FliL; flagellar basal body protein FliL complement(4494398..4494919) Methylomonas methanica MC09 10674092 YP_004514927.1 CDS Metme_4075 NC_015572.1 4495192 4496268 R TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; KEGG: tau:Tola_1258 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase complement(4495192..4496268) Methylomonas methanica MC09 10674093 YP_004514928.1 CDS Metme_4076 NC_015572.1 4496377 4497363 R TIGRFAM: Transaldolase AB; HAMAP: Transaldolase; KEGG: mca:MCA3045 transaldolase B; PFAM: Transaldolase; Transaldolase complement(4496377..4497363) Methylomonas methanica MC09 10674094 YP_004514929.1 CDS Metme_4077 NC_015572.1 4497642 4498301 R KEGG: mca:MCA3048 hypothetical protein; hypothetical protein complement(4497642..4498301) Methylomonas methanica MC09 10674095 YP_004514930.1 CDS Metme_4078 NC_015572.1 4498365 4500377 R TIGRFAM: Transketolase, bacterial-like; KEGG: mca:MCA3046 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase complement(4498365..4500377) Methylomonas methanica MC09 10674096 YP_004514931.1 CDS Metme_4079 NC_015572.1 4500560 4501093 R TIGRFAM: 6-phospho 3-hexuloisomerase; KEGG: mca:MCA3050 SIS domain-containing protein; PFAM: Sugar isomerase (SIS); 6-phospho 3-hexuloisomerase complement(4500560..4501093) Methylomonas methanica MC09 10674097 YP_004514932.1 CDS Metme_4080 NC_015572.1 4501097 4501744 R TIGRFAM: 3-hexulose-6-phosphate synthase; KEGG: mca:MCA2738 hexulose-6-phosphate synthase/SIS domain-containing protein; PFAM: Orotidine 5'-phosphate decarboxylase, core; 3-hexulose-6-phosphate synthase complement(4501097..4501744) Methylomonas methanica MC09 10674098 YP_004514933.1 CDS Metme_4081 NC_015572.1 4502012 4502311 R TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; KEGG: tcx:Tcr_1673 competence protein ComEA helix-hairpin-helix region; competence protein ComEA complement(4502012..4502311) Methylomonas methanica MC09 10674099 YP_004514934.1 CDS Metme_4082 NC_015572.1 4502429 4503403 R TIGRFAM: tRNA (mo5U34)-methyltransferase; HAMAP: tRNA (mo5U34)-methyltransferase; KEGG: gme:Gmet_2531 methyltransferase; PFAM: tRNA (mo5U34)-methyltransferase; tRNA (mo5U34)-methyltransferase complement(4502429..4503403) Methylomonas methanica MC09 10674100 YP_004514935.1 CDS Metme_4083 NC_015572.1 4503400 4504131 R TIGRFAM: tRNA (cmo5U34)-methyltransferase; HAMAP: tRNA (cmo5U34)-methyltransferase; KEGG: glo:Glov_2669 methyltransferase; PFAM: Methyltransferase type 11; tRNA (cmo5U34)-methyltransferase complement(4503400..4504131) Methylomonas methanica MC09 10674101 YP_004514936.1 CDS Metme_4084 NC_015572.1 4504178 4504858 R PFAM: Toluene tolerance; KEGG: mca:MCA2792 hypothetical protein; toluene tolerance family protein complement(4504178..4504858) Methylomonas methanica MC09 10674102 YP_004514937.1 CDS Metme_4085 NC_015572.1 4504966 4505979 D KEGG: mca:MCA2793 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; porphobilinogen synthase 4504966..4505979 Methylomonas methanica MC09 10674103 YP_004514938.1 CDS Metme_4086 NC_015572.1 4506003 4506551 D KEGG: noc:Noc_1407 hypothetical protein; hypothetical protein 4506003..4506551 Methylomonas methanica MC09 10674104 YP_004514939.1 CDS Metme_4087 NC_015572.1 4506544 4507371 D TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: mca:MCA2794 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; shikimate dehydrogenase 4506544..4507371 Methylomonas methanica MC09 10674105 YP_004514940.1 CDS Metme_4088 NC_015572.1 4507464 4508738 D PFAM: Metal-dependent hydrolase HDOD; KEGG: tgr:Tgr7_2694 metal dependent phosphohydrolase; signal transduction protein 4507464..4508738 Methylomonas methanica MC09 10674106 YP_004514941.1 CDS Metme_4089 NC_015572.1 4508743 4510038 D PFAM: Metal-dependent hydrolase HDOD; Cyclic nucleotide-binding; KEGG: maq:Maqu_2422 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 4508743..4510038 Methylomonas methanica MC09 10674107 YP_004514942.1 CDS Metme_4090 NC_015572.1 4510181 4512220 D KEGG: mca:MCA1253 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; oligopeptidase A 4510181..4512220 Methylomonas methanica MC09 10674108 YP_004514943.1 CDS Metme_4091 NC_015572.1 4512294 4512581 D hypothetical protein 4512294..4512581 Methylomonas methanica MC09 10674109 YP_004514944.1 CDS Metme_4092 NC_015572.1 4513469 4514287 R TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; HAMAP: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; KEGG: mca:MCA1490 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(4513469..4514287) Methylomonas methanica MC09 10674113 YP_004514945.1 CDS Metme_4093 NC_015572.1 4514355 4515557 R TIGRFAM: Succinyldiaminopimelate transaminase, beta/gammaproteobacteria; KEGG: mca:MCA1491 succinyldiaminopimelate transaminase; PFAM: Aminotransferase, class I/II; succinyldiaminopimelate transaminase complement(4514355..4515557) Methylomonas methanica MC09 10674114 YP_004514946.1 CDS Metme_4094 NC_015572.1 4515557 4516342 R PFAM: Peptidase M48, Ste24p; KEGG: neu:NE1475 hypothetical protein; peptidase M48 Ste24p complement(4515557..4516342) Methylomonas methanica MC09 10674115 YP_004514947.1 CDS Metme_4095 NC_015572.1 4516418 4516933 R KEGG: yen:YE0828 competence damage-inducible protein A; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal; CinA domain-containing protein complement(4516418..4516933) Methylomonas methanica MC09 10674116 YP_004514948.1 CDS Metme_4096 NC_015572.1 4516946 4517524 R PFAM: Protein of unknown function DUF502; KEGG: mca:MCA0167 hypothetical protein; hypothetical protein complement(4516946..4517524) Methylomonas methanica MC09 10674117 YP_004514949.1 CDS Metme_4097 NC_015572.1 4517799 4518845 D KEGG: app:CAP2UW1_2592 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4517799..4518845 Methylomonas methanica MC09 10674118 YP_004514950.1 CDS Metme_4098 NC_015572.1 4519088 4520377 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: nhl:Nhal_1254 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4519088..4520377 Methylomonas methanica MC09 10674119 YP_004514951.1 CDS Metme_4099 NC_015572.1 4520374 4520847 D PFAM: Protein of unknown function DUF2269, transmembrane; KEGG: nhl:Nhal_1253 integral membrane protein; hypothetical protein 4520374..4520847 Methylomonas methanica MC09 10674120 YP_004514952.1 CDS Metme_4100 NC_015572.1 4520851 4521459 D KEGG: app:CAP2UW1_2589 hypothetical protein; hypothetical protein 4520851..4521459 Methylomonas methanica MC09 10674121 YP_004514953.1 CDS Metme_4101 NC_015572.1 4521619 4523100 R KEGG: pla:Plav_0433 hypothetical protein; hypothetical protein complement(4521619..4523100) Methylomonas methanica MC09 10674122 YP_004514954.1 CDS Metme_4102 NC_015572.1 4523238 4523528 R hypothetical protein complement(4523238..4523528) Methylomonas methanica MC09 10674123 YP_004514955.1 CDS Metme_4103 NC_015572.1 4524052 4524693 D KEGG: sfu:Sfum_1537 hypothetical protein; hypothetical protein 4524052..4524693 Methylomonas methanica MC09 10674124 YP_004514956.1 CDS Metme_4104 NC_015572.1 4524741 4525187 D KEGG: hypothetical protein; manually curated; PFAM: Ribosomal protein L7/L12, C-terminal; 50S ribosomal protein L7/L12 4524741..4525187 Methylomonas methanica MC09 10674125 YP_004514957.1 CDS Metme_4105 NC_015572.1 4525315 4528425 D KEGG: swd:Swoo_0714 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 3; PFAM: Aldehyde dehydrogenase; Proline dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 4525315..4528425 Methylomonas methanica MC09 10674126 YP_004514958.1 CDS Metme_4106 NC_015572.1 4528572 4528862 D PFAM: Nucleotidyltransferase; KEGG: vap:Vapar_3618 DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein 4528572..4528862 Methylomonas methanica MC09 10674127 YP_004514959.1 CDS Metme_4107 NC_015572.1 4528859 4529215 D PFAM: Protein of unknown function DUF86; KEGG: avn:Avin_50240 hypothetical protein; hypothetical protein 4528859..4529215 Methylomonas methanica MC09 10674128 YP_004514960.1 CDS Metme_4108 NC_015572.1 4529525 4530997 D PFAM: Cation transporter; KEGG: nhl:Nhal_3151 cation transporter; cation transporter 4529525..4530997 Methylomonas methanica MC09 10674129 YP_004514961.1 CDS Metme_4109 NC_015572.1 4530994 4531653 D PFAM: Regulator of K+ conductance, N-terminal; KEGG: nhl:Nhal_3150 TrkA-N domain protein; TrkA-N domain-containing protein 4530994..4531653 Methylomonas methanica MC09 10674130 YP_004514962.1 CDS Metme_4110 NC_015572.1 4531871 4534066 D HAMAP: S-adenosyl-L-dependent RNA methyltransferase, bacteria,; KEGG: mca:MCA0712 23S rRNA m(2)G2445 methyltransferase; PFAM: RNA methylase; THUMP; Protein of unknown function methylase; Ribosomal RNA large subunit methyltransferase L 4531871..4534066 Methylomonas methanica MC09 10674131 YP_004514963.1 CDS Metme_4111 NC_015572.1 4534063 4534335 D KEGG: aap:NT05HA_0393 acylphosphatase; HAMAP: Acylphosphatase; PFAM: Acylphosphatase-like; acylphosphatase 4534063..4534335 Methylomonas methanica MC09 10674132 YP_004514964.1 CDS Metme_4112 NC_015572.1 4534393 4535868 R KEGG: pat:Patl_1835 hypothetical protein; hypothetical protein complement(4534393..4535868) Methylomonas methanica MC09 10674133 YP_004514965.1 CDS Metme_4113 NC_015572.1 4536234 4537160 D TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: mca:MCA3060 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; porphobilinogen deaminase 4536234..4537160 Methylomonas methanica MC09 10674134 YP_004514966.1 CDS Metme_4114 NC_015572.1 4537157 4537939 D PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: mca:MCA3061 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; uroporphyrinogen III synthase HEM4 4537157..4537939 Methylomonas methanica MC09 10674135 YP_004514967.1 CDS Metme_4115 NC_015572.1 4537923 4539101 D PFAM: HemX; KEGG: mca:MCA3061 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; hemX domain-containing protein 4537923..4539101 Methylomonas methanica MC09 10674136 YP_004514968.1 CDS Metme_4116 NC_015572.1 4539114 4540364 D PFAM: HemY, N-terminal; KEGG: mca:MCA3062 HemY protein; HemY domain-containing protein 4539114..4540364 Methylomonas methanica MC09 10674137 YP_004514969.1 CDS Metme_4117 NC_015572.1 4540608 4540952 R KEGG: ecc:c3205 hypothetical protein; hypothetical protein complement(4540608..4540952) Methylomonas methanica MC09 10674138 YP_004514970.1 CDS Metme_4118 NC_015572.1 4540952 4541692 R hypothetical protein complement(4540952..4541692) Methylomonas methanica MC09 10674139 YP_004514971.1 CDS Metme_4119 NC_015572.1 4542022 4543485 R TIGRFAM: Carboxylyase-related; HAMAP: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: cja:CJA_0362 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Carboxylyase-related; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(4542022..4543485) Methylomonas methanica MC09 10674140 YP_004514972.1 CDS Metme_4120 NC_015572.1 4543613 4543933 R hypothetical protein complement(4543613..4543933) Methylomonas methanica MC09 10674141 YP_004514973.1 CDS Metme_4121 NC_015572.1 4543983 4544228 R PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: mei:Msip34_1918 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(4543983..4544228) Methylomonas methanica MC09 10674142 YP_004514974.1 CDS Metme_4122 NC_015572.1 4544232 4544717 R PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: mca:MCA0066 pantetheine-phosphate adenylyltransferase; phosphopantetheine adenylyltransferase complement(4544232..4544717) Methylomonas methanica MC09 10674143 YP_004514975.1 CDS Metme_4123 NC_015572.1 4544806 4545357 R TIGRFAM: Conserved hypothetical protein CHP00095; KEGG: mca:MCA0065 methyltransferase, PFAM: Protein of unknown function methylase; methyltransferase complement(4544806..4545357) Methylomonas methanica MC09 10674144 YP_004514976.1 CDS Metme_4124 NC_015572.1 4545361 4546659 R PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: mca:MCA0064 hypothetical protein; peptidase M16 domain-containing protein complement(4545361..4546659) Methylomonas methanica MC09 10674145 YP_004514977.1 CDS Metme_4125 NC_015572.1 4546649 4548034 R KEGG: mca:MCA0063 M16 family peptidase; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; processing peptidase complement(4546649..4548034) Methylomonas methanica MC09 10674146 YP_004514978.1 CDS Metme_4126 NC_015572.1 4548139 4549029 D TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: mca:MCA0062 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 4548139..4549029 Methylomonas methanica MC09 10674147 YP_004514979.1 CDS Metme_4127 NC_015572.1 4549026 4550030 D PFAM: Glycosyl transferase, family 3, N-terminal; KEGG: hch:HCH_02544 hypothetical protein; Glycosyl transferase, family 3 4549026..4550030 Methylomonas methanica MC09 10674148 YP_004514980.1 CDS Metme_4128 NC_015572.1 4550019 4550663 R PFAM: Type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(4550019..4550663) Methylomonas methanica MC09 10674149 YP_004514981.1 CDS Metme_4129 NC_015572.1 4550706 4551296 D KEGG: cps:CPS_4077 lipoprotein; lipoprotein 4550706..4551296 Methylomonas methanica MC09 10674150 YP_004514982.1 CDS Metme_4130 NC_015572.1 4551427 4551906 D KEGG: pru:PRU_2860 FKBP family peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; peptidyl-prolyl isomerase 4551427..4551906 Methylomonas methanica MC09 10674151 YP_004514983.1 CDS Metme_4131 NC_015572.1 4551979 4552593 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: azo:azo0629 hypothetical protein; OmpA/MotB domain-containing protein complement(4551979..4552593) Methylomonas methanica MC09 10674152 YP_004514984.1 CDS Metme_4132 NC_015572.1 4552593 4553042 R KEGG: pol:Bpro_0719 hypothetical protein; hypothetical protein complement(4552593..4553042) Methylomonas methanica MC09 10674153 YP_004514985.1 CDS Metme_4133 NC_015572.1 4553276 4555465 D KEGG: azo:azo0631 HD-domain-containing protein; PFAM: GAF; Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: GAF; Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase with GAF sensor 4553276..4555465 Methylomonas methanica MC09 10674154 YP_004514986.1 CDS Metme_4134 NC_015572.1 4555510 4557648 D KEGG: pol:Bpro_0721 adenylate/guanylate cyclase; PFAM: CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; guanylate cyclase 4555510..4557648 Methylomonas methanica MC09 10674155 YP_004514987.1 CDS Metme_4135 NC_015572.1 4557705 4560710 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain; GAF; PAS fold-4; KEGG: meh:M301_1495 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain; GAF; PAS; PAC motif; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(4557705..4560710) Methylomonas methanica MC09 10674156 YP_004514988.1 CDS Metme_4136 NC_015572.1 4560707 4561684 R KEGG: gca:Galf_1308 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter substrate-binding protein complement(4560707..4561684) Methylomonas methanica MC09 10674157 YP_004514989.1 CDS Metme_4137 NC_015572.1 4561815 4565846 D KEGG: mca:MCA0157 hypothetical protein; hypothetical protein 4561815..4565846 Methylomonas methanica MC09 10674158 YP_004514990.1 CDS Metme_4138 NC_015572.1 4565888 4567360 R KEGG: gpb:HDN1F_24550 probable methyl-accepting chemotaxis protein IV; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer complement(4565888..4567360) Methylomonas methanica MC09 10674159 YP_004514991.1 CDS Metme_4139 NC_015572.1 4567357 4567902 R KEGG: gpb:HDN1F_24560 hypothetical protein; TIGRFAM: PAS; PFAM: PAS fold-3; PAS sensor protein complement(4567357..4567902) Methylomonas methanica MC09 10674160 YP_004514992.1 CDS Metme_4140 NC_015572.1 4568214 4568606 R KEGG: rru:Rru_A0637 hypothetical protein; hypothetical protein complement(4568214..4568606) Methylomonas methanica MC09 10674161 YP_004514993.1 CDS Metme_4141 NC_015572.1 4568765 4568899 D TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: pml:ATP_00378 50S ribosomal protein L34; PFAM: Ribosomal protein L34; 50S ribosomal protein L34 4568765..4568899 Methylomonas methanica MC09 10674162 YP_004514994.1 CDS Metme_4142 NC_015572.1 4568900 4569268 D PFAM: Ribonuclease P; manually curated; TIGRFAM: Ribonuclease P; KEGG: mca:MCA3035 ribonuclease P protein component; HAMAP: Ribonuclease P; Ribonuclease P protein component 4568900..4569268 Methylomonas methanica MC09 10674163 YP_004514995.1 CDS Metme_4143 NC_015572.1 4569250 4569474 D PFAM: Protein of unknown function DUF37; manually curated; TIGRFAM: Protein of unknown function DUF37; KEGG: alv:Alvin_3124 hypothetical protein; HAMAP: Protein of unknown function DUF37; hypothetical protein 4569250..4569474 Methylomonas methanica MC09 10674164 YP_004514996.1 CDS Metme_4144 NC_015572.1 4569478 4571166 D TIGRFAM: Membrane insertion protein, OxoA/YidC, N-terminal; Membrane insertion protein, OxaA/YidC, core; HAMAP: Membrane protein oxaA; KEGG: mca:MCA3037 inner membrane protein, 60 kDa; PFAM: Membrane insertion protein, OxaA/YidC; membrane protein OxaA 4569478..4571166 Methylomonas methanica MC09 10674165 YP_004514997.1 CDS Metme_4145 NC_015572.1 4571176 4572516 D TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; HAMAP: tRNA modification GTPase TrmE; KEGG: tcx:Tcr_2195 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; tRNA modification GTPase mnmE 4571176..4572516 Methylomonas methanica MC09 10674166 YP_004514998.1 CDS Metme_4147 NC_015572.1 4573322 4573600 D PFAM: Plasmid maintenance system killer; KEGG: nde:NIDE1719 toxin of proteic killer gene system; plasmid maintenance system killer protein 4573322..4573600 Methylomonas methanica MC09 10674168 YP_004514999.1 CDS Metme_4148 NC_015572.1 4573613 4573915 D TIGRFAM: Addiction module antidote protein, HigA; KEGG: nde:NIDE1720 antidote of proteic killer gene system; XRE family transcriptional regulator 4573613..4573915 Methylomonas methanica MC09 10674169 YP_004515000.1 CDS Metme_4150 NC_015572.1 4574335 4575402 R PFAM: Integrase, catalytic core; KEGG: azl:AZL_b03960 transposase; integrase catalytic subunit complement(4574335..4575402) Methylomonas methanica MC09 10674171 YP_004515001.1 CDS Metme_4151 NC_015572.1 4575527 4575859 D SMART: HTH transcriptional regulator, ArsR; KEGG: rfr:Rfer_3667 ArsR family transcriptional regulator; regulatory protein ArsR 4575527..4575859 Methylomonas methanica MC09 10674172 YP_004515002.1 CDS Metme_4152 NC_015572.1 4575890 4576375 D KEGG: psa:PST_0240 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 4575890..4576375 Methylomonas methanica MC09 10674173 YP_004515003.1 CDS Metme_4153 NC_015572.1 4576388 4576732 D PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: rpf:Rpic12D_0651 arsenical resistance operon trans-acting repressor ArsD; arsenical resistance operon trans-acting repressor ArsD 4576388..4576732 Methylomonas methanica MC09 10674174 YP_004515004.1 CDS Metme_4154 NC_015572.1 4576778 4578532 D SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, anion-transporting; KEGG: mfa:Mfla_1491 arsenite-activated ATPase (ArsA); PFAM: ATPase, anion-transporting; arsenite-activated ATPase ArsA 4576778..4578532 Methylomonas methanica MC09 10674175 YP_004515005.1 CDS Metme_4155 NC_015572.1 4578582 4579016 D KEGG: bmj:BMULJ_06257 hypothetical protein; hypothetical protein 4578582..4579016 Methylomonas methanica MC09 10674176 YP_004515006.1 CDS Metme_4156 NC_015572.1 4579049 4580119 D KEGG: rrs:RoseRS_1917 arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 4579049..4580119 Methylomonas methanica MC09 10674177 YP_004515007.1 CDS Metme_4157 NC_015572.1 4580121 4582001 R KEGG: mca:MCA0318 SCO1/SenC family protein/methylamine utilization protein MauG, PFAM: Di-haem cytochrome c peroxidase; Copper chaperone SCO1/SenC; cytochrome-c peroxidase complement(4580121..4582001) Methylomonas methanica MC09 10674178 YP_004515008.1 CDS Metme_4158 NC_015572.1 4582336 4582836 R PFAM: Chromate resistance exported protein; KEGG: dal:Dalk_2290 WD-40 repeat protein; chromate resistance exported protein complement(4582336..4582836) Methylomonas methanica MC09 10674179 YP_004515009.1 CDS Metme_4159 NC_015572.1 4582824 4583546 R PFAM: ABC transporter-like; KEGG: pam:PANA_3315 FbpC; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase complement(4582824..4583546) Methylomonas methanica MC09 10674180 YP_004515010.1 CDS Metme_4160 NC_015572.1 4583546 4585144 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_2292 binding-protein-dependent transport systems inner membrane component; ABC transporter permease complement(4583546..4585144) Methylomonas methanica MC09 10674181 YP_004515011.1 CDS Metme_4161 NC_015572.1 4585151 4586149 R PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dal:Dalk_2293 extracellular solute-binding protein family 1; ABC transporter substrate-binding protein complement(4585151..4586149) Methylomonas methanica MC09 10674182 YP_004515012.1 CDS Metme_4162 NC_015572.1 4586146 4586814 R KEGG: rcu:RCOM_2085040 hypothetical protein; hypothetical protein complement(4586146..4586814) Methylomonas methanica MC09 10674183 YP_004515013.1 CDS Metme_4163 NC_015572.1 4586830 4587345 R SMART: Rhodanese-like; KEGG: mpd:MCP_2739 hypothetical protein; rhodanese-like protein complement(4586830..4587345) Methylomonas methanica MC09 10674184 YP_004515014.1 CDS Metme_4164 NC_015572.1 4587395 4588537 R KEGG: dal:Dalk_2285 hypothetical protein; hypothetical protein complement(4587395..4588537) Methylomonas methanica MC09 10674185 YP_004515015.1 CDS Metme_4165 NC_015572.1 4588585 4589457 R PFAM: WD40-like Beta Propeller; KEGG: Tol-Pal system beta propeller repeat protein TolB; hypothetical protein complement(4588585..4589457) Methylomonas methanica MC09 10674186 YP_004515016.1 CDS Metme_4166 NC_015572.1 4589807 4590328 R hypothetical protein complement(4589807..4590328) Methylomonas methanica MC09 10674187 YP_004515017.1 CDS Metme_4167 NC_015572.1 4590353 4593916 R KEGG: mpi:Mpet_1589 YD repeat protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: YD repeat; RHS repeat-associated core domain-containing protein complement(4590353..4593916) Methylomonas methanica MC09 10674188 YP_004515018.1 CDS Metme_4168 NC_015572.1 4593919 4594314 R hypothetical protein complement(4593919..4594314) Methylomonas methanica MC09 10674189 YP_004515019.1 CDS Metme_4169 NC_015572.1 4594332 4597604 R PFAM: PKD; KEGG: dal:Dalk_2289 PKD domain containing protein; PKD domain-containing protein complement(4594332..4597604) Methylomonas methanica MC09 10674190 YP_004515020.1 CDS Metme_4170 NC_015572.1 4598036 4598701 R KEGG: pat:Patl_1068 hypothetical protein; hypothetical protein complement(4598036..4598701) Methylomonas methanica MC09 10674191 YP_004515021.1 CDS Metme_4171 NC_015572.1 4599516 4601024 R KEGG: bha:BH1848 hypothetical protein; PFAM: FAD dependent oxidoreductase; Amine oxidase; all-trans-retinol 13,14-reductase complement(4599516..4601024) Methylomonas methanica MC09 10674192 YP_004515022.1 CDS Metme_4172 NC_015572.1 4601143 4601415 R hypothetical protein complement(4601143..4601415) Methylomonas methanica MC09 10674193 YP_004515023.1 CDS Metme_4173 NC_015572.1 4601590 4602918 R PFAM: AMP-dependent synthetase/ligase; KEGG: xop:PXO_03741 AMP-ligase; AMP-dependent synthetase/ligase complement(4601590..4602918) Methylomonas methanica MC09 10674194 YP_004515024.1 CDS Metme_4174 NC_015572.1 4602959 4604227 D PFAM: Monooxygenase, FAD-binding; KEGG: sfr:Sfri_0342 tryptophan halogenase; monooxygenase FAD-binding protein 4602959..4604227 Methylomonas methanica MC09 10674195 YP_004515025.1 CDS Metme_4175 NC_015572.1 4604249 4605418 D KEGG: pfl:PFL_0464 3-oxoacyl-(acyl carrier protein) synthase I; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; 3-ketoacyl-ACP synthase I 4604249..4605418 Methylomonas methanica MC09 10674196 YP_004515026.1 CDS Metme_4176 NC_015572.1 4605390 4605881 D PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: pst:PSPTO_5108 hypothetical protein; 3-hydroxyacyl-ACP dehydratase 4605390..4605881 Methylomonas methanica MC09 10674197 YP_004515027.1 CDS Metme_4177 NC_015572.1 4605878 4606606 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, KEGG: sml:Smlt4557 3-oxoacyl-[acyl-carrier protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 4605878..4606606 Methylomonas methanica MC09 10674198 YP_004515028.1 CDS Metme_4178 NC_015572.1 4606600 4607835 D KEGG: sbm:Shew185_0325 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-ketoacyl-ACP synthase I 4606600..4607835 Methylomonas methanica MC09 10674199 YP_004515029.1 CDS Metme_4179 NC_015572.1 4607849 4608604 D KEGG: pen:PSEEN0364 hypothetical protein; hypothetical protein 4607849..4608604 Methylomonas methanica MC09 10674200 YP_004515030.1 CDS Metme_4180 NC_015572.1 4608597 4609376 D KEGG: smt:Smal_3924 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4608597..4609376 Methylomonas methanica MC09 10674201 YP_004515031.1 CDS Metme_4181 NC_015572.1 4609363 4609632 D KEGG: abc:ACICU_00519 acyl carrier protein; acyl carrier protein 4609363..4609632 Methylomonas methanica MC09 10674202 YP_004515032.1 CDS Metme_4182 NC_015572.1 4609629 4609877 D PFAM: Phosphopantetheine-binding; KEGG: cja:CJA_0108 acyl carrier protein; phosphopantetheine-binding protein 4609629..4609877 Methylomonas methanica MC09 10674203 YP_004515033.1 CDS Metme_4183 NC_015572.1 4609965 4610525 D KEGG: spe:Spro_0892 inner membrane protein; inner membrane protein 4609965..4610525 Methylomonas methanica MC09 10674204 YP_004515034.1 CDS Metme_4184 NC_015572.1 4610522 4610905 D KEGG: pfo:Pfl01_0436 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 4610522..4610905 Methylomonas methanica MC09 10674205 YP_004515035.1 CDS Metme_4185 NC_015572.1 4610889 4611632 D PFAM: Glycosyl transferase, family 2; KEGG: efe:EFER_3458 acyltransferase; family 2 glycosyl transferase 4610889..4611632 Methylomonas methanica MC09 10674206 YP_004515036.1 CDS Metme_4186 NC_015572.1 4611629 4612612 D PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: son:SO_4373 glycosyl transferase, group 2 family protein; lipid A biosynthesis acyltransferase 4611629..4612612 Methylomonas methanica MC09 10674207 YP_004515037.1 CDS Metme_4187 NC_015572.1 4612609 4613025 D PFAM: Thioesterase superfamily; KEGG: aha:AHA_3389 4-hydroxybenzoyl-CoA thioesterase domain-containing protein; thioesterase 4612609..4613025 Methylomonas methanica MC09 10674208 YP_004515038.1 CDS Metme_4188 NC_015572.1 4613015 4613992 D PFAM: Protein of unknown function DUF81; KEGG: ter:Tery_0309 hypothetical protein; hypothetical protein 4613015..4613992 Methylomonas methanica MC09 10674209 YP_004515039.1 CDS Metme_4189 NC_015572.1 4614016 4614579 D KEGG: dak:DaAHT2_0585 hypothetical protein; hypothetical protein 4614016..4614579 Methylomonas methanica MC09 10674210 YP_004515040.1 CDS Metme_4190 NC_015572.1 4614569 4615885 D PFAM: Monooxygenase, FAD-binding; KEGG: bpr:GBP346_A2174 alkylhalidase; monooxygenase FAD-binding protein 4614569..4615885 Methylomonas methanica MC09 10674211 YP_004515041.1 CDS Metme_4191 NC_015572.1 4616010 4616624 R hypothetical protein complement(4616010..4616624) Methylomonas methanica MC09 10674212 YP_004515042.1 CDS Metme_4192 NC_015572.1 4617033 4617554 D KEGG: tgr:Tgr7_2011 molybdenum cofactor biosynthesis protein B; TIGRFAM: Molybdenum cofactor biosynthesis protein B, proteobacteria; Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; molybdenum cofactor biosynthesis protein B 4617033..4617554 Methylomonas methanica MC09 10674213 YP_004515043.1 CDS Metme_4193 NC_015572.1 4617554 4617934 D PFAM: Protein of unknown function DUF423; KEGG: mca:MCA2407 hypothetical protein; hypothetical protein 4617554..4617934 Methylomonas methanica MC09 10674214 YP_004515044.1 CDS Metme_4194 NC_015572.1 4617894 4618463 D PFAM: Protein of unknown function DUF2495; KEGG: paa:Paes_1487 membrane protein; hypothetical protein 4617894..4618463 Methylomonas methanica MC09 10674215 YP_004515045.1 CDS Metme_4195 NC_015572.1 4618467 4621109 D TIGRFAM: Peptidase M1, alanyl aminopeptidase; KEGG: mca:MCA0774 aminopeptidase N; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; aminopeptidase 4618467..4621109 Methylomonas methanica MC09 10674216 YP_004515046.1 CDS Metme_4196 NC_015572.1 4621159 4621752 D HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: tgr:Tgr7_0213 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 4621159..4621752 Methylomonas methanica MC09 10674217 YP_004515047.1 CDS Metme_4197 NC_015572.1 4621792 4622433 D TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: mca:MCA2804 amidotransferase HisH; PFAM: Glutamine amidotransferase class-I, C-terminal; imidazole glycerol phosphate synthase subunit HisH 4621792..4622433 Methylomonas methanica MC09 10674218 YP_004515048.1 CDS Metme_4198 NC_015572.1 4622499 4623245 D PFAM: Histidine biosynthesis; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: mca:MCA2803 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 4622499..4623245 Methylomonas methanica MC09 10674219 YP_004515049.1 CDS Metme_4199 NC_015572.1 4623281 4624054 D PFAM: Histidine biosynthesis; TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: mmw:Mmwyl1_0751 imidazoleglycerol phosphate synthase, cyclase subunit; imidazole glycerol phosphate synthase subunit HisF 4623281..4624054 Methylomonas methanica MC09 10674220 YP_004515050.1 CDS Metme_4200 NC_015572.1 4624051 4624437 D HAMAP: Phosphoribosyl-AMP cyclohydrolase; KEGG: mca:MCA2801 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 4624051..4624437 Methylomonas methanica MC09 10674221 YP_004515051.1 CDS Metme_4201 NC_015572.1 4624603 4625571 R PFAM: Integrase, catalytic core, phage; KEGG: bpy:Bphyt_0269 integrase; integrase complement(4624603..4625571) Methylomonas methanica MC09 10674223 YP_004515052.1 CDS Metme_4202 NC_015572.1 4625786 4627078 R KEGG: pmy:Pmen_2111 hypothetical protein; hypothetical protein complement(4625786..4627078) Methylomonas methanica MC09 10674224 YP_004515053.1 CDS Metme_4203 NC_015572.1 4627920 4629302 R PFAM: Zonular occludens toxin; KEGG: mfa:Mfla_1458 hypothetical protein; Zonular occludens toxin complement(4627920..4629302) Methylomonas methanica MC09 10674225 YP_004515054.1 CDS Metme_4204 NC_015572.1 4629302 4629652 R hypothetical protein complement(4629302..4629652) Methylomonas methanica MC09 10674226 YP_004515055.1 CDS Metme_4205 NC_015572.1 4629655 4631076 R hypothetical protein complement(4629655..4631076) Methylomonas methanica MC09 10674227 YP_004515056.1 CDS Metme_4206 NC_015572.1 4631099 4631320 R KEGG: vex:VEA_003457 hypothetical protein; hypothetical protein complement(4631099..4631320) Methylomonas methanica MC09 10674228 YP_004515057.1 CDS Metme_4207 NC_015572.1 4631464 4631580 R hypothetical protein complement(4631464..4631580) Methylomonas methanica MC09 10674229 YP_004515058.1 CDS Metme_4208 NC_015572.1 4631612 4632010 R hypothetical protein complement(4631612..4632010) Methylomonas methanica MC09 10674230 YP_004515059.1 CDS Metme_4209 NC_015572.1 4632171 4632275 R hypothetical protein complement(4632171..4632275) Methylomonas methanica MC09 10674231 YP_004515060.1 CDS Metme_4210 NC_015572.1 4632840 4633136 R hypothetical protein complement(4632840..4633136) Methylomonas methanica MC09 10674232 YP_004515061.1 CDS Metme_4211 NC_015572.1 4633129 4633800 R hypothetical protein complement(4633129..4633800) Methylomonas methanica MC09 10674233 YP_004515062.1 CDS Metme_4212 NC_015572.1 4633802 4634032 R hypothetical protein complement(4633802..4634032) Methylomonas methanica MC09 10674234 YP_004515063.1 CDS Metme_4213 NC_015572.1 4634149 4634415 D SMART: Helix-turn-helix type 3; KEGG: eca:ECA2636 phage repressor protein C; helix-turn-helix domain-containing protein 4634149..4634415 Methylomonas methanica MC09 10674235 YP_004515064.1 CDS Metme_4214 NC_015572.1 4634441 4635235 D PFAM: Restriction endonuclease, type IV-like, Mrr; DNA topoisomerase, type IA, zn finger; KEGG: afr:AFE_2769 restriction endonuclease; restriction endonuclease 4634441..4635235 Methylomonas methanica MC09 10674236 YP_004515065.1 CDS Metme_4215 NC_015572.1 4635283 4635564 D KEGG: nhl:Nhal_1263 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 4635283..4635564 Methylomonas methanica MC09 10674237 YP_004515066.1 CDS Metme_4216 NC_015572.1 4635855 4637975 D PFAM: DNA methylase, adenine-specific; KEGG: N-6 DNA methylase; N-6 DNA methylase 4635855..4637975 Methylomonas methanica MC09 10674239 YP_004515067.1 CDS Metme_4217 NC_015572.1 4637972 4639000 D KEGG: dap:Dacet_1979 hypothetical protein; hypothetical protein 4637972..4639000 Methylomonas methanica MC09 10674240 YP_004515068.1 CDS Metme_4218 NC_015572.1 4638997 4640466 D PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ccs:CCNA_00657 type I restriction-modification system specificity subunit; restriction modification system DNA specificity domain-containing protein 4638997..4640466 Methylomonas methanica MC09 10674241 YP_004515069.1 CDS Metme_4219 NC_015572.1 4640463 4640858 D PFAM: Nucleotidyltransferase; KEGG: pna:Pnap_0133 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein 4640463..4640858 Methylomonas methanica MC09 10674242 YP_004515070.1 CDS Metme_4220 NC_015572.1 4640848 4641276 D PFAM: Protein of unknown function DUF86; KEGG: neu:NE2225 hypothetical protein; hypothetical protein 4640848..4641276 Methylomonas methanica MC09 10674243 YP_004515071.1 CDS Metme_4221 NC_015572.1 4641279 4643183 D PFAM: ATPase associated with various cellular activities, AAA-4; KEGG: gka:GK0575 hypothetical protein; transcriptional regulator 4641279..4643183 Methylomonas methanica MC09 10674244 YP_004515072.1 CDS Metme_4222 NC_015572.1 4643193 4646279 D KEGG: dze:Dd1591_4250 protein of unknown function DUF450; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; Restriction endonuclease, type I, EcoRI, R subunit/Type III 4643193..4646279 Methylomonas methanica MC09 10674245 YP_004515073.1 CDS Metme_4223 NC_015572.1 4646292 4646549 D hypothetical protein 4646292..4646549 Methylomonas methanica MC09 10674246 YP_004515074.1 CDS Metme_4224 NC_015572.1 4646546 4647298 D PFAM: Protein of unknown function DUF980; KEGG: tcx:Tcr_2033 hypothetical protein; hypothetical protein 4646546..4647298 Methylomonas methanica MC09 10674247 YP_004515075.1 CDS Metme_4225 NC_015572.1 4647548 4649023 R KEGG: hch:HCH_04677 colanic acid biosynthsis UDP-glucose lipid carrier transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; UDP-phosphate glucose phosphotransferase complement(4647548..4649023) Methylomonas methanica MC09 10674248 YP_004515076.1 CDS Metme_4226 NC_015572.1 4649264 4649956 R KEGG: mfa:Mfla_2194 hypothetical protein; hypothetical protein complement(4649264..4649956) Methylomonas methanica MC09 10674249 YP_004515077.1 CDS Metme_4227 NC_015572.1 4650171 4650938 R PFAM: PEP-CTERM bacterial; KEGG: mfa:Mfla_2194 hypothetical protein; hypothetical protein complement(4650171..4650938) Methylomonas methanica MC09 10674250 YP_004515078.1 CDS Metme_4228 NC_015572.1 4651538 4653940 R KEGG: rpe:RPE_1094 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; hypothetical protein complement(4651538..4653940) Methylomonas methanica MC09 10674251 YP_004515079.1 CDS Metme_4229 NC_015572.1 4653998 4655626 R KEGG: rpe:RPE_1095 eight transmembrane protein EpsH; TIGRFAM: Methanolan biosynthesis EpsI; Exosortase, EpsH; PFAM: Exosortase EpsH-related; EpsI family protein complement(4653998..4655626) Methylomonas methanica MC09 10674252 YP_004515080.1 CDS Metme_4230 NC_015572.1 4655936 4657849 R KEGG: ccb:Clocel_2600 hypothetical protein; PFAM: PA14; Glycoside hydrolase, family 5; SMART: PA14; PA14 domain-containing protein complement(4655936..4657849) Methylomonas methanica MC09 10674253 YP_004515081.1 CDS Metme_4231 NC_015572.1 4658158 4659117 D hypothetical protein 4658158..4659117 Methylomonas methanica MC09 10674254 YP_004515082.1 CDS Metme_4232 NC_015572.1 4659359 4660507 D hypothetical protein 4659359..4660507 Methylomonas methanica MC09 10674255 YP_004515083.1 CDS Metme_4233 NC_015572.1 4660631 4664074 R KEGG: gme:Gmet_1506 tetratricopeptide TPR_4; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SMART: Tetratricopeptide repeat; hypothetical protein complement(4660631..4664074) Methylomonas methanica MC09 10674256 YP_004515084.1 CDS Metme_4234 NC_015572.1 4664267 4665499 R KEGG: ttu:TERTU_4316 glycosyltransferase 4 domain protein; manually curated; PFAM: Glycosyl transferase, group 1; group 1 glycosyl transferase complement(4664267..4665499) Methylomonas methanica MC09 10674257 YP_004515085.1 CDS Metme_4235 NC_015572.1 4665508 4666458 R PFAM: Glycosyl transferase, family 2; KEGG: dak:DaAHT2_1756 glycosyl transferase 2; family 2 glycosyl transferase complement(4665508..4666458) Methylomonas methanica MC09 10674258 YP_004515086.1 CDS Metme_4236 NC_015572.1 4666489 4667478 R PFAM: Glycosyl transferase, family 2; KEGG: cyc:PCC7424_5290 glycosyl transferase 2; family 2 glycosyl transferase complement(4666489..4667478) Methylomonas methanica MC09 10674259 YP_004515087.1 CDS Metme_4237 NC_015572.1 4667540 4668538 R KEGG: acp:A2cp1_2967 glycosyl transferase 2; family 2 glycosyl transferase complement(4667540..4668538) Methylomonas methanica MC09 10674260 YP_004515088.1 CDS Metme_4238 NC_015572.1 4668556 4669674 R PFAM: Glycosyl transferase, group 1; KEGG: cyt:cce_2100 glycosyl transferase; group 1 glycosyl transferase complement(4668556..4669674) Methylomonas methanica MC09 10674261 YP_004515089.1 CDS Metme_4239 NC_015572.1 4669667 4670398 R PFAM: Methyltransferase type 11; KEGG: cyj:Cyan7822_3759 type 11 methyltransferase; type 11 methyltransferase complement(4669667..4670398) Methylomonas methanica MC09 10674262 YP_004515090.1 CDS Metme_4240 NC_015572.1 4670413 4671786 R PFAM: Polysaccharide biosynthesis protein; KEGG: ppu:PP_3132 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(4670413..4671786) Methylomonas methanica MC09 10674263 YP_004515091.1 CDS Metme_4241 NC_015572.1 4671788 4673197 R manually curated; KEGG: bbt:BBta_0993 hypothetical protein; hypothetical protein complement(4671788..4673197) Methylomonas methanica MC09 10674264 YP_004515092.1 CDS Metme_4242 NC_015572.1 4673289 4675667 R KEGG: amr:AM1_0645 hypothetical protein; PFAM: PA14; SMART: PA14; PA14 domain-containing protein complement(4673289..4675667) Methylomonas methanica MC09 10674265 YP_004515093.1 CDS Metme_4243 NC_015572.1 4675701 4676573 R KEGG: nmu:Nmul_A0257 hypothetical protein; hypothetical protein complement(4675701..4676573) Methylomonas methanica MC09 10674266 YP_004515094.1 CDS Metme_4244 NC_015572.1 4676611 4677708 R PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: nmu:Nmul_A0256 oxidoreductase-like; oxidoreductase domain-containing protein complement(4676611..4677708) Methylomonas methanica MC09 10674267 YP_004515095.1 CDS Metme_4245 NC_015572.1 4677801 4678649 R KEGG: gka:GK3311 teichoic acid biosynthesis; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; PFAM: Glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(4677801..4678649) Methylomonas methanica MC09 10674268 YP_004515096.1 CDS Metme_4246 NC_015572.1 4678719 4679468 R KEGG: nde:NIDE2409 exopolysaccharide biosynthesis related tyrosine-protein kinase; exopolysaccharide biosynthesis related tyrosine-protein kinase complement(4678719..4679468) Methylomonas methanica MC09 10674269 YP_004515097.1 CDS Metme_4247 NC_015572.1 4679557 4681302 R PFAM: Lipopolysaccharide biosynthesis; KEGG: nde:NIDE2408 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(4679557..4681302) Methylomonas methanica MC09 10674270 YP_004515098.1 CDS Metme_4248 NC_015572.1 4681322 4682548 R KEGG: pen:PSEEN2948 hypothetical protein; hypothetical protein complement(4681322..4682548) Methylomonas methanica MC09 10674271 YP_004515099.1 CDS Metme_4249 NC_015572.1 4682565 4683152 R PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: nhl:Nhal_3337 polysaccharide export protein; polysaccharide export protein complement(4682565..4683152) Methylomonas methanica MC09 10674272 YP_004515100.1 CDS Metme_4251 NC_015572.1 4683985 4684281 D hypothetical protein 4683985..4684281 Methylomonas methanica MC09 10674274 YP_004515101.1 CDS Metme_4252 NC_015572.1 4684557 4686923 R HAMAP: phosphoketolase; KEGG: gca:Galf_1757 phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal; phosphoketolase complement(4684557..4686923) Methylomonas methanica MC09 10674275 YP_004515102.1 CDS Metme_4253 NC_015572.1 4687068 4688204 R KEGG: ttu:TERTU_4035 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(4687068..4688204) Methylomonas methanica MC09 10674276 YP_004515103.1 CDS Metme_4254 NC_015572.1 4688208 4689599 R PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: swp:swp_1469 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(4688208..4689599) Methylomonas methanica MC09 10674277 YP_004515104.1 CDS Metme_4255 NC_015572.1 4689706 4690980 R TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: mca:MCA3104 histidine protein kinase PhoR; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; histidine kinase complement(4689706..4690980) Methylomonas methanica MC09 10674278 YP_004515105.1 CDS Metme_4256 NC_015572.1 4690986 4691684 R TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: mca:MCA3105 DNA-binding response regulator PhoB; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator PhoB complement(4690986..4691684) Methylomonas methanica MC09 10674279 YP_004515106.1 CDS Metme_4257 NC_015572.1 4691810 4692346 R KEGG: azo:azo0662 hypothetical protein; hypothetical protein complement(4691810..4692346) Methylomonas methanica MC09 10674280 YP_004515107.1 CDS Metme_4258 NC_015572.1 4692532 4694397 R PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: mca:MCA0533 peptidyl-prolyl cis-trans isomerse D; PpiC-type peptidyl-prolyl cis-trans isomerase complement(4692532..4694397) Methylomonas methanica MC09 10674281 YP_004515108.1 CDS Metme_4259 NC_015572.1 4694667 4694939 R KEGG: mca:MCA0532 DNA-binding protein HU-beta; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein complement(4694667..4694939) Methylomonas methanica MC09 10674284 YP_004515109.1 CDS Metme_4260 NC_015572.1 4695144 4697558 R SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: mca:MCA0531 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; anti-sigma H sporulation factor LonB complement(4695144..4697558) Methylomonas methanica MC09 10674285 YP_004515110.1 CDS Metme_4261 NC_015572.1 4697710 4698984 R SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: mca:MCA0530 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; ATP-dependent Clp protease ATP-binding subunit ClpX complement(4697710..4698984) Methylomonas methanica MC09 10674286 YP_004515111.1 CDS Metme_4262 NC_015572.1 4699082 4699714 R PFAM: Peptidase S14, ClpP; TIGRFAM: Peptidase S14, ClpP; HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: mca:MCA0242 ATP-dependent Clp protease proteolytic subunit; ATP-dependent Clp protease proteolytic subunit complement(4699082..4699714) Methylomonas methanica MC09 10674287 YP_004515112.1 CDS Metme_4263 NC_015572.1 4699723 4701024 R TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: tkm:TK90_0572 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; trigger factor Tig complement(4699723..4701024) Methylomonas methanica MC09 10674288 YP_004515113.1 CDS Metme_4264 NC_015572.1 4701288 4701749 D PFAM: Protein of unknown function DUF192; KEGG: pmo:Pmob_0461 hypothetical protein; hypothetical protein 4701288..4701749 Methylomonas methanica MC09 10674290 YP_004515114.1 CDS Metme_4265 NC_015572.1 4701765 4704083 R SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: mca:MCA2839 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger; DNA topoisomerase I complement(4701765..4704083) Methylomonas methanica MC09 10674291 YP_004515115.1 CDS Metme_4266 NC_015572.1 4704100 4704567 R KEGG: mca:MCA2840 hypothetical protein; HAMAP: Protein smg; PFAM: Protein of unknown function DUF494; protein smg complement(4704100..4704567) Methylomonas methanica MC09 10674292 YP_004515116.1 CDS Metme_4267 NC_015572.1 4704576 4705691 R KEGG: nwa:Nwat_3069 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA complement(4704576..4705691) Methylomonas methanica MC09 10674293 YP_004515117.1 CDS Metme_4268 NC_015572.1 4705730 4706773 R PFAM: Peptidoglycan-binding lysin domain; KEGG: nwa:Nwat_3070 peptidoglycan-binding lysin domain-containing protein; peptidoglycan-binding lysin domain-containing protein complement(4705730..4706773) Methylomonas methanica MC09 10674294 YP_004515118.1 CDS Metme_4269 NC_015572.1 4706927 4707895 R KEGG: dps:DP0023 GDP-L-fucose synthetase; PFAM: NAD-dependent epimerase/dehydratase; GDP-L-fucose synthase complement(4706927..4707895) Methylomonas methanica MC09 10674295 YP_004515119.1 CDS Metme_4270 NC_015572.1 4707900 4709021 R TIGRFAM: GDP-mannose 4,6-dehydratase; KEGG: tau:Tola_2053 GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; GDP-mannose 4,6-dehydratase complement(4707900..4709021) Methylomonas methanica MC09 10674296 YP_004515120.1 CDS Metme_4271 NC_015572.1 4709194 4710423 R TIGRFAM: Isocitrate dehydrogenase NADP-dependent, eukaryotic; KEGG: bba:Bd3723 isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase complement(4709194..4710423) Methylomonas methanica MC09 10674297 YP_004515121.1 CDS Metme_4272 NC_015572.1 4710609 4710950 D KEGG: tgr:Tgr7_3066 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 4710609..4710950 Methylomonas methanica MC09 10674298 YP_004515122.1 CDS Metme_4273 NC_015572.1 4711064 4712101 D TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: mca:MCA1537 twitching motility protein PilT; SMART: ATPase, AAA+ type, core; twitching motility protein 4711064..4712101 Methylomonas methanica MC09 10674299 YP_004515123.1 CDS Metme_4274 NC_015572.1 4712116 4713249 D KEGG: mca:MCA1538 twitching motility protein PilU; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; twitching motility protein 4712116..4713249 Methylomonas methanica MC09 10674300 YP_004515124.1 CDS Metme_4275 NC_015572.1 4713263 4714420 D TIGRFAM: Lytic murein transglycosylase B; KEGG: lytic murein transglycosylase B; lytic murein transglycosylase B 4713263..4714420 Methylomonas methanica MC09 10674301 YP_004515125.1 CDS Metme_4276 NC_015572.1 4714540 4714908 D KEGG: cja:CJA_0784 hypothetical protein; hypothetical protein 4714540..4714908 Methylomonas methanica MC09 10674302 YP_004515126.1 CDS Metme_4277 NC_015572.1 4715071 4715874 R hypothetical protein complement(4715071..4715874) Methylomonas methanica MC09 10674303 YP_004515127.1 CDS Metme_4278 NC_015572.1 4716341 4717027 D KEGG: sus:Acid_1755 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4716341..4717027 Methylomonas methanica MC09 10674304 YP_004515128.1 CDS Metme_4279 NC_015572.1 4717427 4719232 D KEGG: sna:Snas_6341 bilirubin oxidase; PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; bilirubin oxidase 4717427..4719232 Methylomonas methanica MC09 10674305 YP_004515129.1 CDS Metme_4280 NC_015572.1 4719278 4719949 D KEGG: hoh:Hoch_4298 electron transport protein SCO1/SenC; hypothetical protein 4719278..4719949 Methylomonas methanica MC09 10674306 YP_004515130.1 CDS Metme_4281 NC_015572.1 4719997 4721694 D KEGG: sna:Snas_6342 hypothetical protein; hypothetical protein 4719997..4721694 Methylomonas methanica MC09 10674307 YP_004515131.1 CDS Metme_4282 NC_015572.1 4721812 4722480 D PFAM: Copper chaperone SCO1/SenC; KEGG: gsu:GSU1398 SCO1/SenC family protein; electron transport protein SCO1/SenC 4721812..4722480 Methylomonas methanica MC09 10674308 YP_004515132.1 CDS Metme_4283 NC_015572.1 4722536 4724257 D KEGG: slt:Slit_1812 hypothetical protein; hypothetical protein 4722536..4724257 Methylomonas methanica MC09 10674309 YP_004515133.1 CDS Metme_4284 NC_015572.1 4724408 4724707 D KEGG: spl:Spea_1502 hypothetical protein; hypothetical protein 4724408..4724707 Methylomonas methanica MC09 10674310 YP_004515134.1 CDS Metme_4285 NC_015572.1 4724725 4725597 D PFAM: Protein of unknown function DUF692; KEGG: mep:MPQ_1794 hypothetical protein; hypothetical protein 4724725..4725597 Methylomonas methanica MC09 10674311 YP_004515135.1 CDS Metme_4286 NC_015572.1 4725594 4726364 D PFAM: Protein of unknown function DUF2063; KEGG: mmb:Mmol_1967 hypothetical protein; hypothetical protein 4725594..4726364 Methylomonas methanica MC09 10674312 YP_004515136.1 CDS Metme_4287 NC_015572.1 4726361 4726918 D PFAM: DoxX; KEGG: mmb:Mmol_1090 DoxX family protein; DoxX family protein 4726361..4726918 Methylomonas methanica MC09 10674313 YP_004515137.1 CDS Metme_4288 NC_015572.1 4726927 4727574 D KEGG: dba:Dbac_1613 hypothetical protein; hypothetical protein 4726927..4727574 Methylomonas methanica MC09 10674314 YP_004515138.1 CDS Metme_4289 NC_015572.1 4727577 4728545 D PFAM: Radical SAM; KEGG: nhl:Nhal_1112 radical SAM domain protein; radical SAM protein 4727577..4728545 Methylomonas methanica MC09 10674315 YP_004515139.1 CDS Metme_4290 NC_015572.1 4728561 4729091 R KEGG: nhl:Nhal_1454 outer membrane lipoprotein Slp; TIGRFAM: Outer membrane lipoprotein Slp; PFAM: Outer membrane lipoprotein Slp; outer membrane lipoprotein, Slp family complement(4728561..4729091) Methylomonas methanica MC09 10674316 YP_004515140.1 CDS Metme_4291 NC_015572.1 4729206 4729445 R hypothetical protein complement(4729206..4729445) Methylomonas methanica MC09 10674317 YP_004515141.1 CDS Metme_4292 NC_015572.1 4729531 4730646 R KEGG: gvi:glr2981 hypothetical protein; hypothetical protein complement(4729531..4730646) Methylomonas methanica MC09 10674318 YP_004515142.1 CDS Metme_4293 NC_015572.1 4730657 4732792 R PFAM: TonB-dependent receptor, plug; KEGG: mca:MCA2180 TonB-dependent receptor; TonB-dependent receptor plug complement(4730657..4732792) Methylomonas methanica MC09 10674319 YP_004515143.1 CDS Metme_4294 NC_015572.1 4732872 4734239 R KEGG: rpd:RPD_1166 HupE/UreJ protein; hypothetical protein complement(4732872..4734239) Methylomonas methanica MC09 10674320 YP_004515144.1 CDS Metme_4295 NC_015572.1 4734469 4734915 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: pva:Pvag_2307 tRNA-specific adenosine deaminase; CMP/dCMP deaminase zinc-binding protein complement(4734469..4734915) Methylomonas methanica MC09 10674321 YP_004515145.1 CDS Metme_4296 NC_015572.1 4734912 4735880 R KEGG: afr:AFE_1674 SUA5/YciO/YrdC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5; Sua5/YciO/YrdC/YwlC family protein complement(4734912..4735880) Methylomonas methanica MC09 10674322 YP_004515146.1 CDS Metme_4297 NC_015572.1 4736197 4736571 D hypothetical protein 4736197..4736571 Methylomonas methanica MC09 10674323 YP_004515147.1 CDS Metme_4298 NC_015572.1 4736595 4737521 R KEGG: ppw:PputW619_2065 5'-nucleotidase; PFAM: 5-nucleotidase; 5'-nucleotidase complement(4736595..4737521) Methylomonas methanica MC09 10674324 YP_004515148.1 CDS Metme_4299 NC_015572.1 4737571 4737786 R KEGG: pph:Ppha_2270 hypothetical protein; hypothetical protein complement(4737571..4737786) Methylomonas methanica MC09 10674325 YP_004515149.1 CDS Metme_4300 NC_015572.1 4737911 4738015 R hypothetical protein complement(4737911..4738015) Methylomonas methanica MC09 10674326 YP_004515150.1 CDS Metme_4301 NC_015572.1 4738265 4738906 D KEGG: mca:MCA0777 LuxR family DNA binding response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 4738265..4738906 Methylomonas methanica MC09 10674327 YP_004515151.1 CDS Metme_4302 NC_015572.1 4739459 4740646 R PFAM: PepSY-associated TM helix; KEGG: nde:NIDE2177 hypothetical protein; PepSY-associated TM helix domain-containing protein complement(4739459..4740646) Methylomonas methanica MC09 10674328 YP_004515152.1 CDS Metme_4303 NC_015572.1 4740679 4743027 R KEGG: neu:NE0549 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor complement(4740679..4743027) Methylomonas methanica MC09 10674329 YP_004515153.1 CDS Metme_4304 NC_015572.1 4743304 4744281 R PFAM: FecR protein; KEGG: pfl:PFL_3155 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR complement(4743304..4744281) Methylomonas methanica MC09 10674330 YP_004515154.1 CDS Metme_4305 NC_015572.1 4744396 4744911 R KEGG: pfl:PFL_4080 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit complement(4744396..4744911) Methylomonas methanica MC09 10674331 YP_004515155.1 CDS Metme_4307 NC_015572.1 4747353 4748012 D PFAM: Carbonic anhydrase; KEGG: tpr:Tpau_2947 carbonic anhydrase; carbonic anhydrase 4747353..4748012 Methylomonas methanica MC09 10674333 YP_004515156.1 CDS Metme_4308 NC_015572.1 4748311 4748601 R PFAM: Protein of unknown function DUF1330; KEGG: hna:Hneap_0092 protein of unknown function DUF1330; hypothetical protein complement(4748311..4748601) Methylomonas methanica MC09 10674334 YP_004515157.1 CDS Metme_4309 NC_015572.1 4748598 4749230 R KEGG: vvy:VV1875 hypothetical protein; hypothetical protein complement(4748598..4749230) Methylomonas methanica MC09 10674335 YP_004515158.1 CDS Metme_4310 NC_015572.1 4749227 4749355 R hypothetical protein complement(4749227..4749355) Methylomonas methanica MC09 10674336 YP_004515159.1 CDS Metme_4311 NC_015572.1 4749365 4750432 R PFAM: Integrase, catalytic core; KEGG: azl:AZL_b03960 transposase; integrase catalytic subunit complement(4749365..4750432) Methylomonas methanica MC09 10674337 YP_004515160.1 CDS Metme_4312 NC_015572.1 4750485 4751540 R KEGG: azo:azo1851 hypothetical protein; hypothetical protein complement(4750485..4751540) Methylomonas methanica MC09 10674338 YP_004515161.1 CDS Metme_4313 NC_015572.1 4751899 4752018 R hypothetical protein complement(4751899..4752018) Methylomonas methanica MC09 10674339 YP_004515162.1 CDS Metme_4314 NC_015572.1 4752198 4752725 D PFAM: Polyketide cyclase/dehydrase; KEGG: mca:MCA0789 MxaD protein; polyketide cyclase/dehydrase 4752198..4752725 Methylomonas methanica MC09 10674340 YP_004515163.1 CDS Metme_4315 NC_015572.1 4752767 4753351 D KEGG: mca:MCA3048 hypothetical protein; hypothetical protein 4752767..4753351 Methylomonas methanica MC09 10674341 YP_004515164.1 CDS Metme_4316 NC_015572.1 4753462 4754118 R KEGG: mca:MCA0777 LuxR family DNA binding response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(4753462..4754118) Methylomonas methanica MC09 10674342 YP_004515165.1 CDS Metme_4317 NC_015572.1 4754465 4756273 D TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; KEGG: mca:MCA0779 methanol dehydrogenase, large subunit; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal; PQQ-dependent dehydrogenase 4754465..4756273 Methylomonas methanica MC09 10674343 YP_004515166.1 CDS Metme_4318 NC_015572.1 4756307 4757212 D TIGRFAM: methanol oxidation system protein MoxJ; PFAM: Extracellular solute-binding protein, family 3; KEGG: vei:Veis_1828 extracellular solute-binding protein; SMART: Extracellular solute-binding protein, family 3; methanol oxidation system protein MoxJ 4756307..4757212 Methylomonas methanica MC09 10674344 YP_004515167.1 CDS Metme_4319 NC_015572.1 4757228 4757707 D KEGG: mca:MCA0781 cytochrome c family protein; TIGRFAM: cytochrome c(L), periplasmic; PFAM: Cytochrome c, class I; cytochrome c(L), periplasmic 4757228..4757707 Methylomonas methanica MC09 10674345 YP_004515168.1 CDS Metme_4320 NC_015572.1 4757721 4757999 D KEGG: sno:Snov_4191 alcohol dehydrogenase (acceptor); PFAM: Methanol dehydrogenase, beta subunit; alcohol dehydrogenase 4757721..4757999 Methylomonas methanica MC09 10674346 YP_004515169.1 CDS Metme_4321 NC_015572.1 4758196 4759215 D KEGG: sno:Snov_4192 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core; ATPase 4758196..4759215 Methylomonas methanica MC09 10674347 YP_004515170.1 CDS Metme_4322 NC_015572.1 4759700 4760146 D hypothetical protein 4759700..4760146 Methylomonas methanica MC09 10674348 YP_004515171.1 CDS Metme_4323 NC_015572.1 4760143 4760769 D hypothetical protein 4760143..4760769 Methylomonas methanica MC09 10674349 YP_004515172.1 CDS Metme_4324 NC_015572.1 4760775 4761629 D KEGG: mca:MCA0784 hypothetical protein; hypothetical protein 4760775..4761629 Methylomonas methanica MC09 10674350 YP_004515173.1 CDS Metme_4325 NC_015572.1 4761626 4762516 D KEGG: mca:MCA0785 MxaA protein; MxaA protein 4761626..4762516 Methylomonas methanica MC09 10674351 YP_004515174.1 CDS Metme_4326 NC_015572.1 4762513 4763502 D KEGG: mca:MCA0786 MxaC protein, PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 4762513..4763502 Methylomonas methanica MC09 10674352 YP_004515175.1 CDS Metme_4327 NC_015572.1 4763499 4764056 D KEGG: mca:MCA0787 MxaK protein; MxaK protein 4763499..4764056 Methylomonas methanica MC09 10674353 YP_004515176.1 CDS Metme_4328 NC_015572.1 4764085 4765011 D SMART: von Willebrand factor, type A; KEGG: mca:MCA0788 MxaL protein; von Willebrand factor A 4764085..4765011 Methylomonas methanica MC09 10674354 YP_004515177.1 CDS Metme_4329 NC_015572.1 4765323 4765817 D KEGG: rfr:Rfer_0381 hypothetical protein; hypothetical protein 4765323..4765817 Methylomonas methanica MC09 10674355 YP_004515178.1 CDS Metme_4330 NC_015572.1 4765937 4766602 D KEGG: mrd:Mrad2831_3420 hypothetical protein; hypothetical protein 4765937..4766602 Methylomonas methanica MC09 10674356 YP_004515179.1 CDS Metme_4331 NC_015572.1 4766682 4766888 D hypothetical protein 4766682..4766888 Methylomonas methanica MC09 10674357 YP_004515180.1 CDS Metme_4332 NC_015572.1 4766994 4768115 R KEGG: avn:Avin_07130 glucan 1,3-beta-glucosidase; glucan 1,3-beta-glucosidase complement(4766994..4768115) Methylomonas methanica MC09 10674358 YP_004515181.1 CDS Metme_4333 NC_015572.1 4768123 4769823 R PFAM: ABC transporter, N-terminal; ABC transporter-like; KEGG: ABC transporter domain-containing protein; ABC transporter complement(4768123..4769823) Methylomonas methanica MC09 10674359 YP_004515182.1 CDS Metme_4334 NC_015572.1 4770007 4771263 R TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: mca:MCA0056 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core; transcription termination factor Rho complement(4770007..4771263) Methylomonas methanica MC09 10674360 YP_004515183.1 CDS Metme_4335 NC_015572.1 4771441 4771767 R KEGG: mca:MCA0057 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(4771441..4771767) Methylomonas methanica MC09 10674361 YP_004515184.1 CDS Metme_4336 NC_015572.1 4771869 4773203 D manually curated; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: tgr:Tgr7_0356 DEAD/DEAH box helicase domain-containing protein; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase 4771869..4773203 Methylomonas methanica MC09 10674362 YP_004515185.1 CDS Metme_4337 NC_015572.1 4773139 4773807 R KEGG: mca:MCA2982 HAD superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD superfamily hydrolase complement(4773139..4773807) Methylomonas methanica MC09 10674363 YP_004515186.1 CDS Metme_4338 NC_015572.1 4773915 4774475 D PFAM: NUDIX hydrolase domain; KEGG: fbl:Fbal_0225 NUDIX hydrolase; NUDIX hydrolase 4773915..4774475 Methylomonas methanica MC09 10674364 YP_004515187.1 CDS Metme_4339 NC_015572.1 4774437 4775009 R KEGG: vcj:VCD_001934 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase complement(4774437..4775009) Methylomonas methanica MC09 10674365 YP_004515188.1 CDS Metme_4340 NC_015572.1 4775126 4775965 D TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: mca:MCA3101 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 4775126..4775965 Methylomonas methanica MC09 10674366 YP_004515189.1 CDS Metme_4341 NC_015572.1 4776030 4776542 R KEGG: maq:Maqu_4168 hypothetical protein; hypothetical protein complement(4776030..4776542) Methylomonas methanica MC09 10674367 YP_004515190.1 CDS Metme_4342 NC_015572.1 4776784 4777386 D KEGG: hch:HCH_04994 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; peroxiredoxin 4776784..4777386 Methylomonas methanica MC09 10674368 YP_004515191.1 CDS Metme_4344 NC_015572.1 4778392 4779690 R PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; KEGG: aca:ACP_3214 group II intron-encoded maturase; RNA-directed DNA polymerase complement(4778392..4779690) Methylomonas methanica MC09 10674370 YP_004515192.1 CDS Metme_4345 NC_015572.1 4780438 4781823 D KEGG: avn:Avin_37630 hypothetical protein; hypothetical protein 4780438..4781823 Methylomonas methanica MC09 10674371 YP_004515193.1 CDS Metme_4346 NC_015572.1 4782709 4782948 R PFAM: BRO, N-terminal; KEGG: hel:HELO_2103 prophage antirepressor; BRO domain-containing protein complement(4782709..4782948) Methylomonas methanica MC09 10674372 YP_004515194.1 CDS Metme_4347 NC_015572.1 4782938 4783789 R hypothetical protein complement(4782938..4783789) Methylomonas methanica MC09 10674373 YP_004515195.1 CDS Metme_4348 NC_015572.1 4783850 4784626 R PFAM: BRO, N-terminal; KEGG: hel:HELO_2103 prophage antirepressor; prophage antirepressor complement(4783850..4784626) Methylomonas methanica MC09 10674374 YP_004515196.1 CDS Metme_4349 NC_015572.1 4784623 4784898 R KEGG: nmu:Nmul_A2182 phage transcriptional regulator, AlpA; manually curated; PFAM: Prophage CP4-57 regulatory; prophage CP4-57 regulator complement(4784623..4784898) Methylomonas methanica MC09 10674375 YP_004515197.1 CDS Metme_4350 NC_015572.1 4785051 4785539 R hypothetical protein complement(4785051..4785539) Methylomonas methanica MC09 10674376 YP_004515198.1 CDS Metme_4351 NC_015572.1 4785583 4785759 R hypothetical protein complement(4785583..4785759) Methylomonas methanica MC09 10674377 YP_004515199.1 CDS Metme_4352 NC_015572.1 4785756 4785992 R hypothetical protein complement(4785756..4785992) Methylomonas methanica MC09 10674378 YP_004515200.1 CDS Metme_4353 NC_015572.1 4785989 4786468 R hypothetical protein complement(4785989..4786468) Methylomonas methanica MC09 10674379 YP_004515201.1 CDS Metme_4354 NC_015572.1 4786901 4787422 R KEGG: ajs:Ajs_0939 hypothetical protein; hypothetical protein complement(4786901..4787422) Methylomonas methanica MC09 10674380 YP_004515202.1 CDS Metme_4355 NC_015572.1 4787476 4787853 R KEGG: bcj:BCAM1062 hypothetical protein; hypothetical protein complement(4787476..4787853) Methylomonas methanica MC09 10674381 YP_004515203.1 CDS Metme_4356 NC_015572.1 4787858 4788409 R KEGG: ajs:Ajs_0932 XRE family transcriptional regulator; XRE family transcriptional regulator complement(4787858..4788409) Methylomonas methanica MC09 10674382 YP_004515204.1 CDS Metme_4357 NC_015572.1 4788484 4789074 R KEGG: ajs:Ajs_0932 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(4788484..4789074) Methylomonas methanica MC09 10674383 YP_004515205.1 CDS Metme_4358 NC_015572.1 4789095 4789823 R KEGG: ajs:Ajs_0937 hypothetical protein; hypothetical protein complement(4789095..4789823) Methylomonas methanica MC09 10674384 YP_004515206.1 CDS Metme_4359 NC_015572.1 4789836 4791746 R KEGG: abn:AB57_1255 hypothetical protein; hypothetical protein complement(4789836..4791746) Methylomonas methanica MC09 10674385 YP_004515207.1 CDS Metme_4360 NC_015572.1 4791751 4791981 R hypothetical protein complement(4791751..4791981) Methylomonas methanica MC09 10674386 YP_004515208.1 CDS Metme_4361 NC_015572.1 4792038 4792631 R hypothetical protein complement(4792038..4792631) Methylomonas methanica MC09 10674387 YP_004515209.1 CDS Metme_4362 NC_015572.1 4792752 4793177 R KEGG: rso:RSc2476 hypothetical protein; hypothetical protein complement(4792752..4793177) Methylomonas methanica MC09 10674388 YP_004515210.1 CDS Metme_4363 NC_015572.1 4793167 4794510 R KEGG: hoh:Hoch_1218 type III restriction protein res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; type III restriction protein res subunit complement(4793167..4794510) Methylomonas methanica MC09 10674389 YP_004515211.1 CDS Metme_4364 NC_015572.1 4794652 4795764 R KEGG: bte:BTH_I3137 hypothetical protein; hypothetical protein complement(4794652..4795764) Methylomonas methanica MC09 10674390 YP_004515212.1 CDS Metme_4365 NC_015572.1 4795754 4796164 R hypothetical protein complement(4795754..4796164) Methylomonas methanica MC09 10674391 YP_004515213.1 CDS Metme_4366 NC_015572.1 4796173 4796421 R PFAM: Prophage CP4-57 regulatory; KEGG: gca:Galf_0723 prophage CP4-57 regulatory; prophage CP4-57 regulator complement(4796173..4796421) Methylomonas methanica MC09 10674392 YP_004515214.1 CDS Metme_4367 NC_015572.1 4796550 4797110 R hypothetical protein complement(4796550..4797110) Methylomonas methanica MC09 10674393 YP_004515215.1 CDS Metme_4368 NC_015572.1 4797103 4798365 R PFAM: Integrase, catalytic core, phage; KEGG: nmu:Nmul_A0064 phage integrase; integrase complement(4797103..4798365) Methylomonas methanica MC09 10674394 YP_004515216.1 CDS Metme_4369 NC_015572.1 4798542 4799405 R KEGG: nhl:Nhal_0748 YicC domain protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal; hypothetical protein complement(4798542..4799405) Methylomonas methanica MC09 10674395 YP_004515217.1 CDS Metme_4370 NC_015572.1 4799450 4800346 D KEGG: alv:Alvin_2985 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; serine/threonine protein kinase 4799450..4800346 Methylomonas methanica MC09 10674396 YP_004515218.1 CDS Metme_4371 NC_015572.1 4800443 4801174 D PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: mca:MCA3024 ribonuclease PH; Ribonuclease PH 4800443..4801174 Methylomonas methanica MC09 10674397 YP_004515219.1 CDS Metme_4372 NC_015572.1 4801205 4801792 D PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: alv:Alvin_2897 non-canonical purine NTP pyrophosphatase; nucleoside-triphosphatase rdgB 4801205..4801792 Methylomonas methanica MC09 10674398 YP_004515220.1 CDS Metme_4373 NC_015572.1 4801789 4802862 D PFAM: Aminoglycoside phosphotransferase; KEGG: npu:Npun_R1422 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 4801789..4802862 Methylomonas methanica MC09 10674399 YP_004515221.1 CDS Metme_4375 NC_015572.1 4803903 4804895 R TIGRFAM: Glucokinase; KEGG: mca:MCA0561 glucokinase; PFAM: Glucokinase; glucokinase complement(4803903..4804895) Methylomonas methanica MC09 10674401 YP_004515222.1 CDS Metme_4376 NC_015572.1 4804907 4808170 R PFAM: Phosphorylase kinase alphabeta; KEGG: ava:Ava_0370 phosphorylase kinase alphabeta; phosphorylase kinase alphabeta complement(4804907..4808170) Methylomonas methanica MC09 10674402 YP_004515223.1 CDS Metme_4377 NC_015572.1 4808185 4808751 R manually curated; KEGG: tgr:Tgr7_2620 dCTP deaminase; TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; Deoxycytidine triphosphate deaminase complement(4808185..4808751) Methylomonas methanica MC09 10674403 YP_004515224.1 CDS Metme_4378 NC_015572.1 4808819 4810393 R KEGG: slt:Slit_2157 hypothetical protein; hypothetical protein complement(4808819..4810393) Methylomonas methanica MC09 10674404 YP_004515225.1 CDS Metme_4379 NC_015572.1 4810495 4811091 R KEGG: mxa:MXAN_3732 hypothetical protein; hypothetical protein complement(4810495..4811091) Methylomonas methanica MC09 10674405 YP_004515226.1 CDS Metme_4380 NC_015572.1 4811310 4811516 R hypothetical protein complement(4811310..4811516) Methylomonas methanica MC09 10674406 YP_004515227.1 CDS Metme_4381 NC_015572.1 4811861 4812457 D PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nmu:Nmul_A1967 TetR family transcriptional regulator; TetR family transcriptional regulator 4811861..4812457 Methylomonas methanica MC09 10674407 YP_004515228.1 CDS Metme_4382 NC_015572.1 4812557 4812946 D hypothetical protein 4812557..4812946 Methylomonas methanica MC09 10674408 YP_004515229.1 CDS Metme_4383 NC_015572.1 4813142 4813417 D KEGG: kko:Kkor_1884 hypothetical protein; hypothetical protein 4813142..4813417 Methylomonas methanica MC09 10674409 YP_004515230.1 CDS Metme_4384 NC_015572.1 4813447 4814772 D KEGG: mca:MCA0317 selenium-binding protein; selenium-binding protein 4813447..4814772 Methylomonas methanica MC09 10674410 YP_004515231.1 CDS Metme_4385 NC_015572.1 4814962 4816098 D KEGG: nhl:Nhal_3354 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 4814962..4816098 Methylomonas methanica MC09 10674411 YP_004515232.1 CDS Metme_4386 NC_015572.1 4816095 4816757 D PFAM: ABC transporter-like; KEGG: pin:Ping_3710 ABC transporter foramino acid ATP-binding protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 4816095..4816757 Methylomonas methanica MC09 10674412 YP_004515233.1 CDS Metme_4387 NC_015572.1 4816744 4816941 R hypothetical protein complement(4816744..4816941) Methylomonas methanica MC09 10674413 YP_004515234.1 CDS Metme_4388 NC_015572.1 4817239 4817550 R hypothetical protein complement(4817239..4817550) Methylomonas methanica MC09 10674414 YP_004515235.1 CDS Metme_4389 NC_015572.1 4817619 4818686 R PFAM: Permease YjgP/YjgQ, predicted; KEGG: mca:MCA2101 hypothetical protein; YjgP/YjgQ family permease complement(4817619..4818686) Methylomonas methanica MC09 10674415 YP_004515236.1 CDS Metme_4390 NC_015572.1 4818683 4819819 R PFAM: Permease YjgP/YjgQ, predicted; KEGG: mca:MCA2100 hypothetical protein; YjgP/YjgQ family permease complement(4818683..4819819) Methylomonas methanica MC09 10674416 YP_004515237.1 CDS Metme_4391 NC_015572.1 4819837 4820094 R hypothetical protein complement(4819837..4820094) Methylomonas methanica MC09 10674417 YP_004515238.1 CDS Metme_4392 NC_015572.1 4820078 4821046 R PFAM: Polyprenyl synthetase; KEGG: nth:Nther_1254 polyprenyl synthetase; polyprenyl synthetase complement(4820078..4821046) Methylomonas methanica MC09 10674418 YP_004515239.1 CDS Metme_4393 NC_015572.1 4821247 4822179 D PFAM: Methyltransferase type 11; KEGG: mca:MCA0083 UbiE/COQ5 family methlytransferase; type 11 methyltransferase 4821247..4822179 Methylomonas methanica MC09 10674419 YP_004515240.1 CDS Metme_4394 NC_015572.1 4822207 4823130 D PFAM: Methyltransferase type 11; KEGG: mca:MCA0083 UbiE/COQ5 family methlytransferase; type 11 methyltransferase 4822207..4823130 Methylomonas methanica MC09 10674420 YP_004515241.1 CDS Metme_4395 NC_015572.1 4823453 4823890 D KEGG: mca:MCA2812 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; MarR family transcriptional regulator 4823453..4823890 Methylomonas methanica MC09 10674421 YP_004515242.1 CDS Metme_4396 NC_015572.1 4824149 4825486 D PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: mca:MCA2813 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 4824149..4825486 Methylomonas methanica MC09 10674422 YP_004515243.1 CDS Metme_4397 NC_015572.1 4826234 4827550 R KEGG: cni:Calni_0504 hypothetical protein; hypothetical protein complement(4826234..4827550) Methylomonas methanica MC09 10674423 YP_004515244.1 CDS Metme_4398 NC_015572.1 4827547 4830798 R KEGG: cni:Calni_0505 cyclic nucleotide-binding protein; PFAM: Forkhead-associated; Patched; Cyclic nucleotide-binding; SMART: Forkhead-associated; Cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(4827547..4830798) Methylomonas methanica MC09 10674424 YP_004515245.1 CDS Metme_4399 NC_015572.1 4830905 4831756 R KEGG: cni:Calni_0506 hypothetical protein; hypothetical protein complement(4830905..4831756) Methylomonas methanica MC09 10674425 YP_004515246.1 CDS Metme_4400 NC_015572.1 4832128 4833612 D HAMAP: cytosol aminopeptidase; KEGG: mca:MCA2099 aminopeptidase A/I; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal; cytosol aminopeptidase 4832128..4833612 Methylomonas methanica MC09 10674426 YP_004515247.1 CDS Metme_4401 NC_015572.1 4833609 4833821 D KEGG: nde:NIDE0067 hypothetical protein; hypothetical protein 4833609..4833821 Methylomonas methanica MC09 10674427 YP_004515248.1 CDS Metme_4402 NC_015572.1 4833809 4834273 D PFAM: DNA polymerase III chi subunit, HolC; KEGG: nhl:Nhal_3009 DNA polymerase III chi subunit HolC; DNA polymerase III chi subunit HolC 4833809..4834273 Methylomonas methanica MC09 10674428 YP_004515249.1 CDS Metme_4403 NC_015572.1 4834322 4834852 D PFAM: Protein of unknown function DUF457, transmembrane; KEGG: nhl:Nhal_1375 hypothetical protein; hypothetical protein 4834322..4834852 Methylomonas methanica MC09 10674429 YP_004515250.1 CDS Metme_4404 NC_015572.1 4834979 4836106 R KEGG: mmb:Mmol_2054 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(4834979..4836106) Methylomonas methanica MC09 10674430 YP_004515251.1 CDS Metme_4405 NC_015572.1 4836583 4836972 D KEGG: vpa:VPA0752 glutathione S-transfersae-related protein; glutathione S-transferase-like protein 4836583..4836972 Methylomonas methanica MC09 10674431 YP_004515252.1 CDS Metme_4406 NC_015572.1 4837209 4837505 D hypothetical protein 4837209..4837505 Methylomonas methanica MC09 10674432 YP_004515253.1 CDS Metme_4407 NC_015572.1 4837533 4838540 D KEGG: lbf:LBF_2415 poly(3-hydroxybutyrate) depolymerase; poly(3-hydroxybutyrate) depolymerase 4837533..4838540 Methylomonas methanica MC09 10674433 YP_004515254.1 CDS Metme_4408 NC_015572.1 4838658 4839425 D hypothetical protein 4838658..4839425 Methylomonas methanica MC09 10674434 YP_004515255.1 CDS Metme_4409 NC_015572.1 4839470 4841428 R PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; KEGG: met:M446_1127 glycoside hydrolase 13 protein; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; 1,4-alpha-glucan-branching protein complement(4839470..4841428) Methylomonas methanica MC09 10674435 YP_004515256.1 CDS Metme_4410 NC_015572.1 4841688 4842413 R PFAM: PEP-CTERM bacterial; hypothetical protein complement(4841688..4842413) Methylomonas methanica MC09 10674436 YP_004515257.1 CDS Metme_4412 NC_015572.1 4843264 4843848 R hypothetical protein complement(4843264..4843848) Methylomonas methanica MC09 10674438 YP_004515258.1 CDS Metme_4415 NC_015572.1 4847045 4847455 R PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: sml:Smlt1456 hypothetical protein; Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein complement(4847045..4847455) Methylomonas methanica MC09 10674441 YP_004515259.1 CDS Metme_4417 NC_015572.1 4849014 4849442 R KEGG: amr:AM1_1201 hypothetical protein; hypothetical protein complement(4849014..4849442) Methylomonas methanica MC09 10674443 YP_004515260.1 CDS Metme_4418 NC_015572.1 4849470 4849778 R hypothetical protein complement(4849470..4849778) Methylomonas methanica MC09 10674444 YP_004515261.1 CDS Metme_4419 NC_015572.1 4849775 4857316 R KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: Transglutaminase-like; YD repeat; RHS repeat-associated core domain-containing protein complement(4849775..4857316) Methylomonas methanica MC09 10674445 YP_004515262.1 CDS Metme_4420 NC_015572.1 4857341 4858576 R PFAM: Ig; KEGG: gur:Gura_3989 hypothetical protein; Ig family protein complement(4857341..4858576) Methylomonas methanica MC09 10674446 YP_004515263.1 CDS Metme_4421 NC_015572.1 4859210 4859749 D KEGG: dac:Daci_1177 hypothetical protein; hypothetical protein 4859210..4859749 Methylomonas methanica MC09 10674447 YP_004515264.1 CDS Metme_4422 NC_015572.1 4859742 4860440 D hypothetical protein 4859742..4860440 Methylomonas methanica MC09 10674448 YP_004515265.1 CDS Metme_4423 NC_015572.1 4860456 4861280 R PFAM: Zinc/iron permease; KEGG: mei:Msip34_1703 zinc/iron permease; zinc/iron permease complement(4860456..4861280) Methylomonas methanica MC09 10674449 YP_004515266.1 CDS Metme_4424 NC_015572.1 4861283 4862005 R KEGG: mca:MCA0973 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; multi-copper polyphenol oxidoreductase, laccase complement(4861283..4862005) Methylomonas methanica MC09 10674450 YP_004515267.1 CDS Metme_4425 NC_015572.1 4861986 4862936 R TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: mca:MCA0972 ribosomal large subunit pseudouridine synthase D; SMART: RNA-binding S4; RluA family pseudouridine synthase complement(4861986..4862936) Methylomonas methanica MC09 10674451 YP_004515268.1 CDS Metme_4426 NC_015572.1 4863020 4863862 D TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: mca:MCA0971 competence lipoprotein ComL; outer membrane assembly lipoprotein YfiO 4863020..4863862 Methylomonas methanica MC09 10674452 YP_004515269.1 CDS Metme_4427 NC_015572.1 4863866 4865086 D hypothetical protein 4863866..4865086 Methylomonas methanica MC09 10674453 YP_004515270.1 CDS Metme_4428 NC_015572.1 4865133 4865729 D PFAM: Protein of unknown function DUF820; KEGG: tmz:Tmz1t_3766 protein of unknown function DUF820; hypothetical protein 4865133..4865729 Methylomonas methanica MC09 10674454 YP_004515271.1 CDS Metme_4429 NC_015572.1 4865726 4866280 D PFAM: Protein of unknown function DUF2058; KEGG: hch:HCH_01554 hypothetical protein; hypothetical protein 4865726..4866280 Methylomonas methanica MC09 10674455 YP_004515272.1 CDS Metme_4430 NC_015572.1 4866409 4867242 D PFAM: Thymidylate synthase, C-terminal; TIGRFAM: Thymidylate synthase, C-terminal; HAMAP: Thymidylate synthase; KEGG: asa:ASA_0676 thymidylate synthase; thymidylate synthase 4866409..4867242 Methylomonas methanica MC09 10674456 YP_004515273.1 CDS Metme_4431 NC_015572.1 4867399 4869702 D TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor region; GAF; PAS fold; ATP-binding region, ATPase-like; KEGG: cvi:CV_3259 sensory transduction histidine kinase; SMART: ATP-binding region, ATPase-like; GAF; PAS; PAC motif; signal transduction histidine kinase 4867399..4869702 Methylomonas methanica MC09 10674457 YP_004515274.1 CDS Metme_4432 NC_015572.1 4869719 4872181 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS fold-4; KEGG: npu:Npun_F3678 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS; PAC motif; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 4869719..4872181 Methylomonas methanica MC09 10674458 YP_004515275.1 CDS Metme_4433 NC_015572.1 4872230 4873114 R SMART: Ankyrin repeat; KEGG: slt:Slit_1312 ankyrin; ankyrin complement(4872230..4873114) Methylomonas methanica MC09 10674459 YP_004515276.1 CDS Metme_4434 NC_015572.1 4873325 4873957 D SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: mca:MCA2899 endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; endonuclease III 4873325..4873957 Methylomonas methanica MC09 10674460 YP_004515277.1 CDS Metme_4435 NC_015572.1 4874062 4874676 D KEGG: sse:Ssed_2858 hypothetical protein; hypothetical protein 4874062..4874676 Methylomonas methanica MC09 10674461 YP_004515278.1 CDS Metme_4436 NC_015572.1 4874703 4875551 D KEGG: mca:MCA3108 hypothetical protein; HAMAP: UPF0276 protein; PFAM: Protein of unknown function DUF692; hypothetical protein 4874703..4875551 Methylomonas methanica MC09 10674462 YP_004515279.1 CDS Metme_4437 NC_015572.1 4875551 4876312 D PFAM: Protein of unknown function DUF2063; KEGG: mca:MCA3109 hypothetical protein; hypothetical protein 4875551..4876312 Methylomonas methanica MC09 10674463 YP_004515280.1 CDS Metme_4438 NC_015572.1 4876290 4876625 R KEGG: bbe:BBR47_55640 hypothetical protein; hypothetical protein complement(4876290..4876625) Methylomonas methanica MC09 10674464 YP_004515281.1 CDS Metme_4439 NC_015572.1 4876700 4877140 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rhi:NGR_c14120 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 4876700..4877140 Methylomonas methanica MC09 10674465 YP_004515282.1 CDS Metme_4440 NC_015572.1 4877152 4878288 D TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; KEGG: mca:MCA3079 oxygen-independent coproporphyrinogen III oxidase, SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 4877152..4878288 Methylomonas methanica MC09 10674466 YP_004515283.1 CDS Metme_4441 NC_015572.1 4878337 4878975 D PFAM: Phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: ctu:Ctu_41470 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 4878337..4878975 Methylomonas methanica MC09 10674467 YP_004515284.1 CDS Metme_4442 NC_015572.1 4879078 4881018 D KEGG: mei:Msip34_1996 hypothetical protein; hypothetical protein 4879078..4881018 Methylomonas methanica MC09 10674468 YP_004515285.1 CDS Metme_4443 NC_015572.1 4881095 4881874 R PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal; TIGRFAM: S-adenosylmethionine decarboxylase, bacterial; HAMAP: S-adenosylmethionine decarboxylase proenzyme; KEGG: mca:MCA1749 S-adenosylmethionine decarboxylase; S-adenosylmethionine decarboxylase complement(4881095..4881874) Methylomonas methanica MC09 10674469 YP_004515286.1 CDS Metme_4444 NC_015572.1 4881879 4882298 R PFAM: Peroxiredoxin, OsmC-like protein; KEGG: ttu:TERTU_3124 OsmC family protein; OsmC family protein complement(4881879..4882298) Methylomonas methanica MC09 10674470 YP_004515287.1 CDS Metme_4445 NC_015572.1 4882424 4883080 D KEGG: nhl:Nhal_0863 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 4882424..4883080 Methylomonas methanica MC09 10674471 YP_004515288.1 CDS Metme_4446 NC_015572.1 4883081 4884274 D KEGG: rpf:Rpic12D_1388 major facilitator superfamily MFS_1; manually curated; PFAM: Major facilitator superfamily MFS-1; major facilitator superfamily protein 4883081..4884274 Methylomonas methanica MC09 10674472 YP_004515289.1 CDS Metme_4447 NC_015572.1 4884242 4885192 R PFAM: Peptidase M23; KEGG: pca:Pcar_1475 metalloendopeptidase-like membrane protein; peptidase M23 complement(4884242..4885192) Methylomonas methanica MC09 10674473 YP_004515290.1 CDS Metme_4448 NC_015572.1 4885209 4885553 R KEGG: maq:Maqu_3821 hypothetical protein; hypothetical protein complement(4885209..4885553) Methylomonas methanica MC09 10674474 YP_004515291.1 CDS Metme_4449 NC_015572.1 4885655 4887250 D KEGG: hypothetical protein; HAMAP: UPF0061 protein ydiU; PFAM: Uncharacterised protein family UPF0061; hypothetical protein 4885655..4887250 Methylomonas methanica MC09 10674475 YP_004515292.1 CDS Metme_4450 NC_015572.1 4887329 4889992 D KEGG: rpf:Rpic12D_1619 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; 2-oxo-acid dehydrogenase E1 4887329..4889992 Methylomonas methanica MC09 10674476 YP_004515293.1 CDS Metme_4451 NC_015572.1 4890018 4891319 D KEGG: aeh:Mlg_0270 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; Dihydrolipoyllysine-residue acetyltransferase 4890018..4891319 Methylomonas methanica MC09 10674477 YP_004515294.1 CDS Metme_4452 NC_015572.1 4891385 4891792 D KEGG: geo:Geob_3291 nucleotidyltransferase substrate binding protein, HI0074 family; TIGRFAM: Nucleotidyltransferase substrate binding protein, HI0074; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; nucleotidyltransferase substrate binding protein 4891385..4891792 Methylomonas methanica MC09 10674478 YP_004515295.1 CDS Metme_4453 NC_015572.1 4891782 4892108 D PFAM: Nucleotidyltransferase; KEGG: gur:Gura_1133 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein 4891782..4892108 Methylomonas methanica MC09 10674479 YP_004515296.1 CDS Metme_4454 NC_015572.1 4892194 4893609 D TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: mca:MCA3002 pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 4892194..4893609 Methylomonas methanica MC09 10674480 YP_004515297.1 CDS Metme_4455 NC_015572.1 4893701 4894201 D hypothetical protein 4893701..4894201 Methylomonas methanica MC09 10674481 YP_004515298.1 CDS Metme_4456 NC_015572.1 4894269 4894481 D KEGG: efe:EFER_1271 hypothetical protein; hypothetical protein 4894269..4894481 Methylomonas methanica MC09 10674482 YP_004515299.1 CDS Metme_4457 NC_015572.1 4894478 4894693 D KEGG: efe:EFER_1270 hypothetical protein, exported membran protein, cation/multidrug efflux pump; hypothetical protein 4894478..4894693 Methylomonas methanica MC09 10674483 YP_004515300.1 CDS Metme_4458 NC_015572.1 4894748 4895398 R PFAM: Glutathione S-transferase, N-terminal; KEGG: mca:MCA1002 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein complement(4894748..4895398) Methylomonas methanica MC09 10674484 YP_004515301.1 CDS Metme_4459 NC_015572.1 4895507 4896076 D PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mfa:Mfla_0472 TetR family transcriptional regulator; TetR family transcriptional regulator 4895507..4896076 Methylomonas methanica MC09 10674485 YP_004515302.1 CDS Metme_4460 NC_015572.1 4896104 4896523 D KEGG: pct:PC1_3510 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047; hypothetical protein 4896104..4896523 Methylomonas methanica MC09 10674486 YP_004515303.1 CDS Metme_4461 NC_015572.1 4896597 4897058 D PFAM: Protein of unknown function DUF411; KEGG: nhl:Nhal_2564 protein of unknown function DUF411; hypothetical protein 4896597..4897058 Methylomonas methanica MC09 10674487 YP_004515304.1 CDS Metme_4462 NC_015572.1 4897102 4898118 D PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: nhl:Nhal_0682 anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 4897102..4898118 Methylomonas methanica MC09 10674488 YP_004515305.1 CDS Metme_4463 NC_015572.1 4898191 4898991 D KEGG: mca:MCA2587 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase 4898191..4898991 Methylomonas methanica MC09 10674489 YP_004515306.1 CDS Metme_4464 NC_015572.1 4899027 4899857 D KEGG: azl:AZL_a06430 protein phosphatase; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related; Ser/Thr phosphatase 4899027..4899857 Methylomonas methanica MC09 10674490 YP_004515307.1 CDS Metme_4465 NC_015572.1 4899862 4900563 R KEGG: nde:NIDE1528 hypothetical protein; PFAM: Forkhead-associated; SMART: Forkhead-associated; FHA domain-containing protein complement(4899862..4900563) Methylomonas methanica MC09 10674491 YP_004515308.1 CDS Metme_4466 NC_015572.1 4900637 4901542 R PFAM: Aldose 1-epimerase; KEGG: amr:AM1_5101 aldose 1-epimerase; aldose-1-epimerase complement(4900637..4901542) Methylomonas methanica MC09 10674492 YP_004515309.1 CDS Metme_4467 NC_015572.1 4901863 4902141 R KEGG: aba:Acid345_3226 hypothetical protein; hypothetical protein complement(4901863..4902141) Methylomonas methanica MC09 10674493 YP_004515310.1 CDS Metme_4468 NC_015572.1 4902239 4902652 D hypothetical protein 4902239..4902652 Methylomonas methanica MC09 10674494 YP_004515311.1 CDS Metme_4469 NC_015572.1 4902670 4903155 R hypothetical protein complement(4902670..4903155) Methylomonas methanica MC09 10674495 YP_004515312.1 CDS Metme_4470 NC_015572.1 4903219 4903893 R hypothetical protein complement(4903219..4903893) Methylomonas methanica MC09 10674496 YP_004515313.1 CDS Metme_4471 NC_015572.1 4904175 4905080 R PFAM: PEP-CTERM bacterial; Peptidase, C-terminal, archaeal/bacterial; hypothetical protein complement(4904175..4905080) Methylomonas methanica MC09 10674497 YP_004515314.1 CDS Metme_4473 NC_015572.1 4906210 4907313 R KEGG: hau:Haur_5273 hypothetical protein; hypothetical protein complement(4906210..4907313) Methylomonas methanica MC09 10674499 YP_004515315.1 CDS Metme_4474 NC_015572.1 4907297 4909327 R KEGG: geo:Geob_2866 hypothetical protein; hypothetical protein complement(4907297..4909327) Methylomonas methanica MC09 10674500 YP_004515316.1 CDS Metme_4475 NC_015572.1 4909327 4911057 R PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: sbp:Sbal223_0390 restriction modification system DNA specificity domain protein; restriction modification system DNA specificity domain-containing protein complement(4909327..4911057) Methylomonas methanica MC09 10674501 YP_004515317.1 CDS Metme_4476 NC_015572.1 4911054 4913597 R PFAM: DNA methylase, adenine-specific; KEGG: geo:Geob_2868 N-6 DNA methylase; N-6 DNA methylase complement(4911054..4913597) Methylomonas methanica MC09 10674502 YP_004515318.1 CDS Metme_4477 NC_015572.1 4913619 4916351 R PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; DNA/RNA helicase, C-terminal; KEGG: geo:Geob_2869 type III restriction protein res subunit; SMART: DEAD-like helicase, N-terminal; Type I site-specific deoxyribonuclease complement(4913619..4916351) Methylomonas methanica MC09 10674503 YP_004515319.1 CDS Metme_4478 NC_015572.1 4916430 4917137 R manually curated; KEGG: hmo:HM1_1450 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase complement(4916430..4917137) Methylomonas methanica MC09 10674504 YP_004515320.1 CDS Metme_4481 NC_015572.1 4918578 4919255 D KEGG: app:CAP2UW1_4519 phage DNA methylase; phage DNA methylase 4918578..4919255 Methylomonas methanica MC09 10674507 YP_004515321.1 CDS Metme_4482 NC_015572.1 4919252 4920127 D KEGG: app:CAP2UW1_4518 hypothetical protein; hypothetical protein 4919252..4920127 Methylomonas methanica MC09 10674508 YP_004515322.1 CDS Metme_4483 NC_015572.1 4920062 4920757 R KEGG: app:CAP2UW1_4517 hypothetical protein; hypothetical protein complement(4920062..4920757) Methylomonas methanica MC09 10674509 YP_004515323.1 CDS Metme_4484 NC_015572.1 4920723 4921328 R PFAM: Queuosine synthesis-like; KEGG: app:CAP2UW1_4516 ExsB family protein; queuosine synthesis-like protein complement(4920723..4921328) Methylomonas methanica MC09 10674510 YP_004515324.1 CDS Metme_4485 NC_015572.1 4921325 4922560 R PFAM: Nucleoside 2-deoxyribosyltransferase; Carbohydrate/purine kinase; KEGG: nucleoside 2-deoxyribosyltransferase; nucleoside 2-deoxyribosyltransferase complement(4921325..4922560) Methylomonas methanica MC09 10674511 YP_004515325.1 CDS Metme_4486 NC_015572.1 4922557 4922886 R manually curated; KEGG: app:CAP2UW1_4510 hypothetical protein; hypothetical protein complement(4922557..4922886) Methylomonas methanica MC09 10674512 YP_004515326.1 CDS Metme_4487 NC_015572.1 4923172 4923648 R KEGG: rpi:Rpic_2614 hypothetical protein; hypothetical protein complement(4923172..4923648) Methylomonas methanica MC09 10674513 YP_004515327.1 CDS Metme_4488 NC_015572.1 4923725 4924672 R hypothetical protein complement(4923725..4924672) Methylomonas methanica MC09 10674514 YP_004515328.1 CDS Metme_4489 NC_015572.1 4925085 4925324 R KEGG: tmz:Tmz1t_2134 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(4925085..4925324) Methylomonas methanica MC09 10674515 YP_004515329.1 CDS Metme_4490 NC_015572.1 4925426 4926559 D KEGG: bhy:BHWA1_01953 hypothetical protein; hypothetical protein 4925426..4926559 Methylomonas methanica MC09 10674516 YP_004515330.1 CDS Metme_4491 NC_015572.1 4926656 4927396 R KEGG: 5,10-methylenetetrahydrofolate reductase-like protein; 5,10-methylenetetrahydrofolate reductase complement(4926656..4927396) Methylomonas methanica MC09 10674517 YP_004515331.1 CDS Metme_4492 NC_015572.1 4928083 4929678 R KEGG: sbl:Sbal_4356 hypothetical protein; hypothetical protein complement(4928083..4929678) Methylomonas methanica MC09 10674518 YP_004515332.1 CDS Metme_4493 NC_015572.1 4929675 4931171 R KEGG: sbl:Sbal_4357 transposition protein; transposition protein complement(4929675..4931171) Methylomonas methanica MC09 10674519 YP_004515333.1 CDS Metme_4494 NC_015572.1 4931171 4932826 R KEGG: sbl:Sbal_4358 transposon Tn7 transposition protein TnsC; transposon Tn7 transposition protein TnsC complement(4931171..4932826) Methylomonas methanica MC09 10674520 YP_004515334.1 CDS Metme_4495 NC_015572.1 4932970 4933608 R KEGG: nca:Noca_1093 hypothetical protein; hypothetical protein complement(4932970..4933608) Methylomonas methanica MC09 10674521 YP_004515335.1 CDS Metme_4496 NC_015572.1 4933610 4934203 R hypothetical protein complement(4933610..4934203) Methylomonas methanica MC09 10674522 YP_004515336.1 CDS Metme_4497 NC_015572.1 4934196 4935134 R KEGG: mta:Moth_2233 hypothetical protein; hypothetical protein complement(4934196..4935134) Methylomonas methanica MC09 10674523 YP_004515337.1 CDS Metme_4498 NC_015572.1 4935124 4936110 R KEGG: hne:HNE_2537 hypothetical protein; hypothetical protein complement(4935124..4936110) Methylomonas methanica MC09 10674524 YP_004515338.1 CDS Metme_4499 NC_015572.1 4936104 4936670 R PFAM: Queuosine synthesis-like; KEGG: hne:HNE_2538 hypothetical protein; queuosine synthesis-like protein complement(4936104..4936670) Methylomonas methanica MC09 10674525 YP_004515339.1 CDS Metme_4500 NC_015572.1 4936848 4938929 R PFAM: Integrase, catalytic core; KEGG: sbl:Sbal_4359 integrase catalytic subunit; integrase catalytic subunit complement(4936848..4938929) Methylomonas methanica MC09 10674526 YP_004515340.1 CDS Metme_4501 NC_015572.1 4938916 4939740 R PFAM: TnsA endonuclease, N-terminal; TnsA endonuclease C-terminal; KEGG: sbl:Sbal_4360 transposon Tn7 transposition protein TnsA; TnsA endonuclease complement(4938916..4939740) Methylomonas methanica MC09 10674527 YP_004515341.1 CDS Metme_4502 NC_015572.1 4939883 4941712 R PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: nhl:Nhal_3943 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase complement(4939883..4941712) Methylomonas methanica MC09 10674528 YP_004515342.1 CDS Metme_4503 NC_015572.1 4941714 4943084 R PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: mca:MCA0014 UDP-N-acetylglucosamine pyrophosphorylase; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(4941714..4943084) Methylomonas methanica MC09 10674529 YP_004515343.1 CDS Metme_4504 NC_015572.1 4943175 4943597 R TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; KEGG: nwa:Nwat_3128 ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal; ATP synthase subunit epsilon complement(4943175..4943597) Methylomonas methanica MC09 10674530 YP_004515344.1 CDS Metme_4505 NC_015572.1 4943625 4944998 R TIGRFAM: ATPase, F1 complex, beta subunit; HAMAP: ATPase, F1 complex, beta subunit; KEGG: kko:Kkor_2628 ATP synthase F1, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta complement(4943625..4944998) Methylomonas methanica MC09 10674531 YP_004515345.1 CDS Metme_4506 NC_015572.1 4945042 4945905 R TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: mca:MCA0011 ATP synthase F1, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma complement(4945042..4945905) Methylomonas methanica MC09 10674532 YP_004515346.1 CDS Metme_4507 NC_015572.1 4945919 4947460 R TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: mca:MCA0010 F0F1 ATP synthase subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha complement(4945919..4947460) Methylomonas methanica MC09 10674533 YP_004515347.1 CDS Metme_4508 NC_015572.1 4947482 4948012 R TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: mca:MCA0009 ATP synthase F1, delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta complement(4947482..4948012) Methylomonas methanica MC09 10674534 YP_004515348.1 CDS Metme_4509 NC_015572.1 4948016 4948489 R TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: mca:MCA0008 ATP synthase F0, B subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b complement(4948016..4948489) Methylomonas methanica MC09 10674535 YP_004515349.1 CDS Metme_4510 NC_015572.1 4948602 4948886 R TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: aeh:Mlg_2874 F0F1 ATP synthase subunit C; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c complement(4948602..4948886) Methylomonas methanica MC09 10674536 YP_004515350.1 CDS Metme_4511 NC_015572.1 4948937 4949701 R TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: mca:MCA0006 F0F1 ATP synthase subunit A; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a complement(4948937..4949701) Methylomonas methanica MC09 10674537 YP_004515351.1 CDS Metme_4512 NC_015572.1 4949720 4950088 R PFAM: ATPase, F0 complex, subunit I, proteobacteria-type; KEGG: aeh:Mlg_2876 ATP synthase I chain; ATP synthase I chain complement(4949720..4950088) Methylomonas methanica MC09 10674538 YP_004515352.1 CDS Metme_4513 NC_015572.1 4950403 4951254 R TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: psm:PSM_A3115 partitioning protein B; SMART: ParB-like nuclease; parB-like partition protein complement(4950403..4951254) Methylomonas methanica MC09 10674539 YP_004515353.1 CDS Metme_4514 NC_015572.1 4951251 4952027 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: maq:Maqu_3884 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase complement(4951251..4952027) Methylomonas methanica MC09 10674540 YP_004515354.1 CDS Metme_4515 NC_015572.1 4952020 4952646 R TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: gca:Galf_2943 methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; Ribosomal RNA small subunit methyltransferase G complement(4952020..4952646) Methylomonas methanica MC09 10674541 YP_004515355.1 CDS Metme_4516 NC_015572.1 4952646 4954514 R TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: mca:MCA0001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG complement(4952646..4954514) Methylomonas methanica MC09 10674542 YP_004515356.1 CDS Metme_4517 NC_015572.1 4954583 4954813 D hypothetical protein 4954583..4954813 Methylomonas methanica MC09 10674543 YP_004515357.1 CDS Metme_4518 NC_015572.1 4954810 4955418 D PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; HAMAP: GTP cyclohydrolase-2; KEGG: srm:SRM_01710 riboflavin-specific deaminase/GTP cyclohydrolase II; GTP cyclohydrolase-2 4954810..4955418 Methylomonas methanica MC09 10674544 YP_004515358.1 CDS Metme_4519 NC_015572.1 4955429 4957819 D PFAM: Peptidase S16, lon C-terminal; KEGG: pag:PLES_49591 ATP-dependent protease; peptidase S16 lon domain-containing protein 4955429..4957819 Methylomonas methanica MC09 10674545 YP_004515359.1 CDS Metme_4520 NC_015572.1 4958114 4958626 R KEGG: vha:VIBHAR_p08263 hypothetical protein; hypothetical protein complement(4958114..4958626) Methylomonas methanica MC09 10674546 YP_004515360.1 CDS Metme_4521 NC_015572.1 4958623 4959675 R KEGG: eic:NT01EI_2025 hypothetical protein; hypothetical protein complement(4958623..4959675) Methylomonas methanica MC09 10674547 YP_004515361.1 CDS Metme_4523 NC_015572.1 4960691 4961164 R PFAM: MEKHLA; KEGG: mca:MCA0608 hypothetical protein; MEKHLA domain-containing protein complement(4960691..4961164) Methylomonas methanica MC09 10674549 YP_004515362.1 CDS Metme_4524 NC_015572.1 4961338 4961604 D KEGG: hypothetical protein; hypothetical protein 4961338..4961604 Methylomonas methanica MC09 10674550 YP_004515363.1 CDS Metme_4525 NC_015572.1 4961733 4962170 D hypothetical protein 4961733..4962170 Methylomonas methanica MC09 10674551 YP_004515364.1 CDS Metme_4526 NC_015572.1 4962201 4963721 R KEGG: sml:Smlt3222 fumarate hydratase; TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha complement(4962201..4963721) Methylomonas methanica MC09 10674552 YP_004515365.1 CDS Metme_4527 NC_015572.1 4963782 4964015 R PFAM: Glutaredoxin 2; KEGG: slo:Shew_1813 glutaredoxin 2; glutaredoxin complement(4963782..4964015) Methylomonas methanica MC09 10674553 YP_004515366.1 CDS Metme_4528 NC_015572.1 4964012 4964515 R PFAM: Uncharacterised protein family UPF0114, prokaryotic; manually curated; TIGRFAM: Uncharacterised protein family UPF0114, bacteria; KEGG: sbp:Sbal223_3668 hypothetical protein; HAMAP: Uncharacterised protein family UPF0114, gammaproteobacteria; hypothetical protein complement(4964012..4964515) Methylomonas methanica MC09 10674554 YP_004515367.1 CDS Metme_4529 NC_015572.1 4964530 4968201 R TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: mca:MCA1545 B12-dependent methionine synthase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region; methionine synthase complement(4964530..4968201) Methylomonas methanica MC09 10674555 YP_004515368.1 CDS Metme_4530 NC_015572.1 4968282 4968470 D KEGG: ilo:IL2326 hypothetical protein; hypothetical protein 4968282..4968470 Methylomonas methanica MC09 10674556 YP_004515369.1 CDS Metme_4531 NC_015572.1 4968533 4968952 R hypothetical protein complement(4968533..4968952) Methylomonas methanica MC09 10674557 YP_004515370.1 CDS Metme_4532 NC_015572.1 4969163 4969291 D hypothetical protein 4969163..4969291 Methylomonas methanica MC09 10674558 YP_004515371.1 CDS Metme_4533 NC_015572.1 4969428 4971335 D KEGG: noc:Noc_2136 hypothetical protein; PFAM: thiol-disulphide oxidoreductase DCC; SMART: HTTM; thiol-disulfide oxidoreductase 4969428..4971335 Methylomonas methanica MC09 10674559 YP_004515372.1 CDS Metme_4534 NC_015572.1 4971447 4971584 D hypothetical protein 4971447..4971584 Methylomonas methanica MC09 10674560 YP_004515373.1 CDS Metme_4535 NC_015572.1 4971771 4971908 D hypothetical protein 4971771..4971908 Methylomonas methanica MC09 10674561 YP_004515374.1 CDS Metme_4536 NC_015572.1 4971930 4972157 R hypothetical protein complement(4971930..4972157) Methylomonas methanica MC09 10674562 YP_004515375.1 CDS Metme_4537 NC_015572.1 4972302 4973063 R KEGG: nwa:Nwat_2728 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(4972302..4973063) Methylomonas methanica MC09 10674563 YP_004515376.1 CDS Metme_4538 NC_015572.1 4973029 4973571 R KEGG: mca:MCA2051 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase; histidinol-phosphate phosphatase complement(4973029..4973571) Methylomonas methanica MC09 10674564 YP_004515377.1 CDS Metme_4539 NC_015572.1 4973568 4975628 R TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; KEGG: mca:MCA2050 glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(4973568..4975628) Methylomonas methanica MC09 10674565 YP_004515378.1 CDS Metme_4540 NC_015572.1 4975658 4976176 R KEGG: sli:Slin_1473 hypothetical protein; hypothetical protein complement(4975658..4976176) Methylomonas methanica MC09 10674566 YP_004515379.1 CDS Metme_4541 NC_015572.1 4976169 4977224 R KEGG: sli:Slin_1472 ATPase-like protein; ATPase-like protein complement(4976169..4977224) Methylomonas methanica MC09 10674567 YP_004515380.1 CDS Metme_4542 NC_015572.1 4977237 4978253 R PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: mca:MCA2049 glycyl-tRNA synthetase subunit alpha; glycyl-tRNA synthetase subunit alpha complement(4977237..4978253) Methylomonas methanica MC09 10674568 YP_004515381.1 CDS Metme_4543 NC_015572.1 4978261 4979256 R PFAM: Alpha/beta hydrolase fold-1; KEGG: pmy:Pmen_4180 alpha/beta hydrolase fold; alpha/beta hydrolase complement(4978261..4979256) Methylomonas methanica MC09 10674569 YP_004515382.1 CDS Metme_4544 NC_015572.1 4979367 4980320 D manually curated; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; KEGG: app:CAP2UW1_1580 heat shock protein DnaJ domain protein; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 4979367..4980320 Methylomonas methanica MC09 10674570 YP_004515383.1 CDS Metme_4545 NC_015572.1 4980324 4980653 D KEGG: app:CAP2UW1_1581 transcriptional regulatory protein, MerR family; MerR family transcriptional regulator 4980324..4980653 Methylomonas methanica MC09 10674571 YP_004515384.1 CDS Metme_4546 NC_015572.1 4980711 4981430 R KEGG: nhl:Nhal_2293 phosphate transport system regulatory protein PhoU; TIGRFAM: PhoU; PFAM: PhoU; phosphate uptake regulator PhoU complement(4980711..4981430) Methylomonas methanica MC09 10674572 YP_004515385.1 CDS Metme_4547 NC_015572.1 4981442 4982275 R SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease 1; KEGG: psa:PST_4024 phosphate transporter ATP-binding protein; PFAM: ABC transporter-like; phosphate ABC transporter ATPase complement(4981442..4982275) Methylomonas methanica MC09 10674573 YP_004515386.1 CDS Metme_4548 NC_015572.1 4982313 4983968 R KEGG: nhl:Nhal_2291 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(4982313..4983968) Methylomonas methanica MC09 10674574 YP_004515387.1 CDS Metme_4549 NC_015572.1 4983965 4986244 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nhl:Nhal_2290 binding-protein-dependent transport systems inner membrane component; ABC transporter permease complement(4983965..4986244) Methylomonas methanica MC09 10674575 YP_004515388.1 CDS Metme_4550 NC_015572.1 4986450 4987439 R TIGRFAM: Phosphate binding protein; KEGG: nhl:Nhal_2289 phosphate binding protein; phosphate binding protein complement(4986450..4987439) Methylomonas methanica MC09 10674576 YP_004515389.1 CDS Metme_4551 NC_015572.1 4987581 4988063 R KEGG: mca:MCA2729 dihydrofolate reductase; PFAM: Dihydrofolate reductase region; Dihydrofolate reductase complement(4987581..4988063) Methylomonas methanica MC09 10674577 YP_004515390.1 CDS Metme_4552 NC_015572.1 4988111 4989121 D KEGG: pjd:Pjdr2_5900 asparaginase/glutaminase; manually curated; PFAM: Asparaginase/glutaminase; asparaginase/glutaminase 4988111..4989121 Methylomonas methanica MC09 10674578 YP_004515391.1 CDS Metme_4553 NC_015572.1 4989151 4989639 R KEGG: app:CAP2UW1_2163 hypothetical protein; hypothetical protein complement(4989151..4989639) Methylomonas methanica MC09 10674579 YP_004515392.1 CDS Metme_4554 NC_015572.1 4989695 4989892 R hypothetical protein complement(4989695..4989892) Methylomonas methanica MC09 10674580 YP_004515393.1 CDS Metme_4555 NC_015572.1 4989918 4991810 R PFAM: Transketolase, C-terminal; Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: npu:Npun_F4396 transketolase domain-containing protein; transketolase complement(4989918..4991810) Methylomonas methanica MC09 10674581 YP_004515394.1 CDS Metme_4556 NC_015572.1 4992467 4993054 R HAMAP: Phosphoheptose isomerase; KEGG: hel:HELO_1949 phosphoheptose isomerase; phosphoheptose isomerase complement(4992467..4993054) Methylomonas methanica MC09 10674582 YP_004515395.1 CDS Metme_4557 NC_015572.1 4993059 4993427 R TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: tgr:Tgr7_0756 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; hypothetical protein complement(4993059..4993427) Methylomonas methanica MC09 10674583 YP_004515396.1 CDS Metme_4558 NC_015572.1 4993427 4995253 R PFAM: LppC lipoprotein; KEGG: mca:MCA0185 lipoprotein; LppC family lipoprotein complement(4993427..4995253) Methylomonas methanica MC09 10674584 YP_004515397.1 CDS Metme_4559 NC_015572.1 4995276 4996127 D TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: mca:MCA0186 hypothetical protein; PFAM: Tetrapyrrole methylase; Ribosomal RNA small subunit methyltransferase I 4995276..4996127 Methylomonas methanica MC09 10674585 YP_004515398.1 CDS Metme_4560 NC_015572.1 4996647 4997159 D KEGG: npu:Npun_F3836 transcriptional regulator; transcriptional regulator 4996647..4997159 Methylomonas methanica MC09 10674586 YP_004515399.1 CDS Metme_4561 NC_015572.1 4997146 4998108 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: npu:Npun_F2364 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 4997146..4998108 Methylomonas methanica MC09 10674587 YP_004515400.1 CDS Metme_4562 NC_015572.1 4998549 4998881 R manually curated; hypothetical protein complement(4998549..4998881) Methylomonas methanica MC09 10674588 YP_004515401.1 CDS Metme_4563 NC_015572.1 4998971 4999633 R PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A0556 hypothetical protein; N-acetyltransferase GCN5 complement(4998971..4999633) Methylomonas methanica MC09 10674589 YP_004515402.1 CDS Metme_4564 NC_015572.1 5000745 5001728 R KEGG: dar:Daro_1526 zinc-containing alcohol dehydrogenase superfamily protein; TIGRFAM: Quinone oxidoreductase , YhdH/YhfP; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; YhdH/YhfP family quinone oxidoreductase complement(5000745..5001728) Methylomonas methanica MC09 10674590 YP_004515403.1 CDS Metme_4565 NC_015572.1 5001847 5002461 R KEGG: cpi:Cpin_2552 hypothetical protein; hypothetical protein complement(5001847..5002461) Methylomonas methanica MC09 10674591 YP_004515404.1 CDS Metme_4567 NC_015572.1 5003055 5004122 R PFAM: Integrase, catalytic core; KEGG: azl:AZL_b03960 transposase; integrase catalytic subunit complement(5003055..5004122) Methylomonas methanica MC09 10674593 YP_004515405.1 CDS Metme_4568 NC_015572.1 5004335 5005102 R KEGG: lil:LA_1701 hypothetical protein; hypothetical protein complement(5004335..5005102) Methylomonas methanica MC09 10674594 YP_004515406.1 CDS Metme_4569 NC_015572.1 5005583 5005900 D KEGG: azo:azo2488 hypothetical protein; hypothetical protein 5005583..5005900 Methylomonas methanica MC09 10674595 YP_004515407.1 CDS Metme_4570 NC_015572.1 5005997 5006473 D PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: ttu:TERTU_1575 dinitrogenase iron-molybdenum cofactor; dinitrogenase iron-molybdenum cofactor biosynthesis protein 5005997..5006473 Methylomonas methanica MC09 10674596 YP_004515408.1 CDS Metme_4571 NC_015572.1 5006547 5006852 R hypothetical protein complement(5006547..5006852) Methylomonas methanica MC09 10674597 YP_004515409.1 CDS Metme_4572 NC_015572.1 5007313 5007843 D KEGG: azo:azo2661 hypothetical protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 5007313..5007843 Methylomonas methanica MC09 10674598 YP_004515410.1 CDS Metme_4573 NC_015572.1 5008070 5008618 D hypothetical protein 5008070..5008618 Methylomonas methanica MC09 10674599 YP_004515411.1 CDS Metme_4574 NC_015572.1 5008928 5010001 D KEGG: meh:M301_2731 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Biotin/lipoyl attachment; RND family efflux transporter MFP subunit 5008928..5010001 Methylomonas methanica MC09 10674600 YP_004515412.1 CDS Metme_4575 NC_015572.1 5009998 5013096 D PFAM: Acriflavin resistance protein; KEGG: mfa:Mfla_2533 acriflavin resistance protein; acriflavin resistance protein 5009998..5013096 Methylomonas methanica MC09 10674601 YP_004515413.1 CDS Metme_4576 NC_015572.1 5013222 5014031 D PFAM: Protein of unknown function DUF81; KEGG: mei:Msip34_1516 protein of unknown function DUF81; hypothetical protein 5013222..5014031 Methylomonas methanica MC09 10674602 YP_004515414.1 CDS Metme_4577 NC_015572.1 5014147 5015919 D PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; KEGG: ttu:TERTU_0455 TrkA-C domain protein; TrkA-C domain-containing protein 5014147..5015919 Methylomonas methanica MC09 10674603 YP_004515415.1 CDS Metme_4578 NC_015572.1 5016013 5017821 R KEGG: tkm:TK90_0204 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein TypA complement(5016013..5017821) Methylomonas methanica MC09 10674604 YP_004515416.1 CDS Metme_4579 NC_015572.1 5017902 5018294 R KEGG: mca:MCA2851 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein complement(5017902..5018294) Methylomonas methanica MC09 10674605 YP_004515417.1 CDS Metme_4580 NC_015572.1 5018291 5018878 R PFAM: Methyltransferase type 12; KEGG: tgr:Tgr7_0203 tellurite resistance methyltransferase, TehB, core; type 12 methyltransferase complement(5018291..5018878) Methylomonas methanica MC09 10674606 YP_004515418.1 CDS Metme_4581 NC_015572.1 5018875 5019780 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mca:MCA2456 LysR family transcriptional regulator; LysR family transcriptional regulator complement(5018875..5019780) Methylomonas methanica MC09 10674607 YP_004515419.1 CDS Metme_4582 NC_015572.1 5019972 5020124 D hypothetical protein 5019972..5020124 Methylomonas methanica MC09 10674608 YP_004515420.1 CDS Metme_4583 NC_015572.1 5020306 5020623 D TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphatase; KEGG: mca:MCA2800 phosphoribosyl-ATP pyrophosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase 5020306..5020623 Methylomonas methanica MC09 10674609 YP_004515421.1 CDS Metme_4584 NC_015572.1 5020663 5020884 D TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: abo:ABO_2250 sec-independent protein translocase TatA/E homolog; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase tatA/E-like protein 5020663..5020884 Methylomonas methanica MC09 10674610 YP_004515422.1 CDS Metme_4585 NC_015572.1 5020891 5021208 D TIGRFAM: Twin-arginine translocation protein TatB; HAMAP: Twin-arginine translocation protein TatB; KEGG: alv:Alvin_2527 twin-arginine translocation protein, TatB subunit; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase tatB-like protein 5020891..5021208 Methylomonas methanica MC09 10674611 YP_004515423.1 CDS Metme_4586 NC_015572.1 5021192 5021935 D KEGG: mca:MCA1486 sec-independent protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 5021192..5021935 Methylomonas methanica MC09 10674612 YP_004515424.1 CDS Metme_4587 NC_015572.1 5021939 5022622 D KEGG: pen:PSEEN0318 hypothetical protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal; hypothetical protein 5021939..5022622 Methylomonas methanica MC09 10674613 YP_004515425.1 CDS Metme_4588 NC_015572.1 5022714 5024474 D TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: mca:MCA3089 arginyl-tRNA synthetase; arginyl-tRNA synthetase 5022714..5024474 Methylomonas methanica MC09 10674614 YP_004515426.1 CDS Metme_4589 NC_015572.1 5024474 5025115 D PFAM: Sporulation/cell division region, bacteria; KEGG: mca:MCA3090 hypothetical protein; sporulation domain-containing protein 5024474..5025115 Methylomonas methanica MC09 10674615 YP_004515427.1 CDS Metme_4590 NC_015572.1 5025142 5027040 R KEGG: multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; integral membrane sensor hybrid histidine kinase complement(5025142..5027040) Methylomonas methanica MC09 10674616 YP_004515428.1 CDS Metme_4591 NC_015572.1 5027037 5027519 R KEGG: rmr:Rmar_2315 transmembrane protein; transmembrane protein complement(5027037..5027519) Methylomonas methanica MC09 10674617 YP_004515429.1 CDS Metme_4592 NC_015572.1 5027565 5029598 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: gme:Gmet_1669 TonB-dependent receptor, plug; TonB-dependent receptor plug complement(5027565..5029598) Methylomonas methanica MC09 10674618 YP_004515430.1 CDS Metme_4593 NC_015572.1 5029724 5030959 R KEGG: slt:Slit_2244 HI0933 family protein; TIGRFAM: uncharacterized flavoprotein, PP_4765 family; HI0933-like protein; PFAM: HI0933-like protein; flavoprotein complement(5029724..5030959) Methylomonas methanica MC09 10674619 YP_004515431.1 CDS Metme_4594 NC_015572.1 5031049 5031498 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: xcb:XC_0670 cytosine deaminase; CMP/dCMP deaminase zinc-binding protein complement(5031049..5031498) Methylomonas methanica MC09 10674620 YP_004515432.1 CDS Metme_4595 NC_015572.1 5031544 5032134 R TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: mca:MCA2585 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal; glutamine amidotransferase of anthranilate synthase complement(5031544..5032134) Methylomonas methanica MC09 10674621 YP_004515433.1 CDS Metme_4596 NC_015572.1 5032131 5033615 R TIGRFAM: Anthranilate synthase component I; KEGG: mca:MCA2584 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase component I complement(5032131..5033615) Methylomonas methanica MC09 10674622 YP_004515434.1 CDS Metme_4597 NC_015572.1 5033767 5034642 D KEGG: pla:Plav_1540 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: Fumarylacetoacetase, C-terminal-like; ureidoglycolate lyase 5033767..5034642 Methylomonas methanica MC09 10674623 YP_004515435.1 CDS Metme_4598 NC_015572.1 5034723 5035214 D KEGG: stp:Strop_3603 hypothetical protein; hypothetical protein 5034723..5035214 Methylomonas methanica MC09 10674624 YP_004515436.1 CDS Metme_4599 NC_015572.1 5035221 5037107 R KEGG: mep:MPQ_0973 potassium transporter; HAMAP: Low affinity potassium transport system protein kup; PFAM: K+ potassium transporter; Low affinity potassium transport system protein kup complement(5035221..5037107) Methylomonas methanica MC09 10674625 YP_004515437.1 CDS Metme_4600 NC_015572.1 5037331 5038119 D KEGG: mca:MCA0441 TonB domain-containing protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein 5037331..5038119 Methylomonas methanica MC09 10674626 YP_004515438.1 CDS Metme_4601 NC_015572.1 5038142 5038807 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: mep:MPQ_0123 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 5038142..5038807 Methylomonas methanica MC09 10674627 YP_004515439.1 CDS Metme_4602 NC_015572.1 5038819 5039229 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mca:MCA0670 biopolymer ExbD/TolR family transporter; biopolymer transport protein ExbD/TolR 5038819..5039229 Methylomonas methanica MC09 10674628 YP_004515440.1 CDS Metme_4603 NC_015572.1 5039281 5040165 R TIGRFAM: S6 modification enzyme RimK; HAMAP: Ribosomal protein S6 modification protein; KEGG: alv:Alvin_1979 alpha-L-glutamate ligase; PFAM: ATP-grasp fold, RimK-type; 30S ribosomal protein S6 complement(5039281..5040165) Methylomonas methanica MC09 10674629 YP_004515441.1 CDS Metme_4604 NC_015572.1 5040181 5040855 R PFAM: Haloacid dehalogenase-like hydrolase; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAMAP: Enolase-phosphatase E1; KEGG: tgr:Tgr7_2625 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; enolase complement(5040181..5040855) Methylomonas methanica MC09 10674630 YP_004515442.1 CDS Metme_4605 NC_015572.1 5040852 5041409 R HAMAP: Acireductone dioxygenase; KEGG: nwa:Nwat_0695 acireductone dioxygenase; PFAM: Acireductone dioxygenase, ARD; acireductone dioxygenase complement(5040852..5041409) Methylomonas methanica MC09 10674631 YP_004515443.1 CDS Metme_4606 NC_015572.1 5041406 5042029 R PFAM: Class II aldolase/adducin, N-terminal; TIGRFAM: Methylthioribulose-1-phosphate dehydratase; HAMAP: Methylthioribulose-1-phosphate dehydratase; KEGG: mca:MCA0799 methylthioribulose-1-phosphate dehydratase; methylthioribulose-1-phosphate dehydratase complement(5041406..5042029) Methylomonas methanica MC09 10674632 YP_004515444.1 CDS Metme_4607 NC_015572.1 5042474 5042941 R KEGG: bbe:BBR47_41610 acetoin utilization protein AcuB; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein with CBS domains complement(5042474..5042941) Methylomonas methanica MC09 10674634 YP_004515445.1 CDS Metme_4608 NC_015572.1 5043140 5044393 R PFAM: Aldehyde dehydrogenase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: maq:Maqu_2417 gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(5043140..5044393) Methylomonas methanica MC09 10674635 YP_004515446.1 CDS Metme_4609 NC_015572.1 5044441 5046003 R PFAM: GTP-binding protein, HSR1-related; KEGG: gpb:HDN1F_16900 hypothetical protein; HSR1-like GTP-binding protein complement(5044441..5046003) Methylomonas methanica MC09 10674636 YP_004515447.1 CDS Metme_4610 NC_015572.1 5046000 5047205 R KEGG: hypothetical protein; hypothetical protein complement(5046000..5047205) Methylomonas methanica MC09 10674637 YP_004515448.1 CDS Metme_4611 NC_015572.1 5047788 5049137 R PFAM: RmuC; KEGG: maq:Maqu_2040 hypothetical protein; RmuC-domain-containing protein complement(5047788..5049137) Methylomonas methanica MC09 10674638 YP_004515449.1 CDS Metme_4612 NC_015572.1 5049134 5050414 R PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: tcx:Tcr_1570 glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde 2,1-aminomutase complement(5049134..5050414) Methylomonas methanica MC09 10674639 YP_004515450.1 CDS Metme_4613 NC_015572.1 5050493 5050960 R hypothetical protein complement(5050493..5050960) Methylomonas methanica MC09 10674640 YP_004515451.1 CDS Metme_4614 NC_015572.1 5050976 5051590 R KEGG: pmy:Pmen_4388 guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; HAMAP: Guanylate kinase, sub-group; SMART: Guanylate kinase/L-type calcium channel region; guanylate kinase complement(5050976..5051590) Methylomonas methanica MC09 10674641 Metme_R0002 tRNA Metme_R0002 NC_015572.1 394190 394266 D tRNA-Ile 394190..394266 Methylomonas methanica MC09 10670349 Metme_R0003 tRNA Metme_R0003 NC_015572.1 394380 394455 D tRNA-Ala 394380..394455 Methylomonas methanica MC09 10670350 Metme_R0006 tRNA Metme_R0006 NC_015572.1 398188 398274 D tRNA-Leu 398188..398274 Methylomonas methanica MC09 10670353 Metme_R0007 tRNA Metme_R0007 NC_015572.1 402814 402889 R tRNA-Lys complement(402814..402889) Methylomonas methanica MC09 10670359 Metme_R0010 tRNA Metme_R0010 NC_015572.1 693236 693312 D tRNA-Ile 693236..693312 Methylomonas methanica MC09 10670630 Metme_R0011 tRNA Metme_R0011 NC_015572.1 693426 693501 D tRNA-Ala 693426..693501 Methylomonas methanica MC09 10670631 Metme_R0014 tRNA Metme_R0014 NC_015572.1 808135 808211 D tRNA-Met 808135..808211 Methylomonas methanica MC09 10670748 Metme_R0017 tRNA Metme_R0017 NC_015572.1 852026 852102 D tRNA-Ile 852026..852102 Methylomonas methanica MC09 10670788 Metme_R0018 tRNA Metme_R0018 NC_015572.1 852216 852291 D tRNA-Ala 852216..852291 Methylomonas methanica MC09 10670789 Metme_R0021 tRNA Metme_R0021 NC_015572.1 890961 891037 D tRNA-Met 890961..891037 Methylomonas methanica MC09 10670824 Metme_R0022 tRNA Metme_R0022 NC_015572.1 1100923 1100999 R tRNA-Arg complement(1100923..1100999) Methylomonas methanica MC09 10671018 Metme_R0023 tRNA Metme_R0023 NC_015572.1 1167766 1167841 D tRNA-Val 1167766..1167841 Methylomonas methanica MC09 10671090 Metme_R0024 tRNA Metme_R0024 NC_015572.1 1403761 1403836 R tRNA-Phe complement(1403761..1403836) Methylomonas methanica MC09 10671292 Metme_R0025 tRNA Metme_R0025 NC_015572.1 1669809 1669895 D tRNA-Leu 1669809..1669895 Methylomonas methanica MC09 10671521 Metme_R0026 tRNA Metme_R0026 NC_015572.1 1886987 1887063 R tRNA-Pro complement(1886987..1887063) Methylomonas methanica MC09 10671710 Metme_R0027 tRNA Metme_R0027 NC_015572.1 1894557 1894633 R tRNA-Val complement(1894557..1894633) Methylomonas methanica MC09 10671719 Metme_R0028 tRNA Metme_R0028 NC_015572.1 2116180 2116257 D tRNA-Met 2116180..2116257 Methylomonas methanica MC09 10671924 Metme_R0029 tRNA Metme_R0029 NC_015572.1 2253368 2253444 D tRNA-Asp 2253368..2253444 Methylomonas methanica MC09 10672056 Metme_R0030 tRNA Metme_R0030 NC_015572.1 2465171 2465255 D tRNA-Leu 2465171..2465255 Methylomonas methanica MC09 10672252 Metme_R0031 tRNA Metme_R0031 NC_015572.1 2475023 2475112 R tRNA-Ser complement(2475023..2475112) Methylomonas methanica MC09 10672266 Metme_R0032 tRNA Metme_R0032 NC_015572.1 2874115 2874190 D tRNA-Phe 2874115..2874190 Methylomonas methanica MC09 10672607 Metme_R0033 tRNA Metme_R0033 NC_015572.1 2948278 2948365 D tRNA-Ser 2948278..2948365 Methylomonas methanica MC09 10672677 Metme_R0035 tRNA Metme_R0035 NC_015572.1 3624493 3624577 R tRNA-Leu complement(3624493..3624577) Methylomonas methanica MC09 10673291 Metme_R0036 tRNA Metme_R0036 NC_015572.1 3684141 3684217 D tRNA-Arg 3684141..3684217 Methylomonas methanica MC09 10673347 Metme_R0037 tRNA Metme_R0037 NC_015572.1 3865476 3865551 D tRNA-Gly 3865476..3865551 Methylomonas methanica MC09 10673503 Metme_R0038 tRNA Metme_R0038 NC_015572.1 3865600 3865673 D tRNA-Cys 3865600..3865673 Methylomonas methanica MC09 10673504 Metme_R0039 tRNA Metme_R0039 NC_015572.1 4109988 4110063 R tRNA-Asn complement(4109988..4110063) Methylomonas methanica MC09 10673705 Metme_R0040 tRNA Metme_R0040 NC_015572.1 4110089 4110165 R tRNA-Arg complement(4110089..4110165) Methylomonas methanica MC09 10673706 Metme_R0041 tRNA Metme_R0041 NC_015572.1 4110229 4110319 R tRNA-Ser complement(4110229..4110319) Methylomonas methanica MC09 10673707 Metme_R0042 tRNA Metme_R0042 NC_015572.1 4213856 4213931 R tRNA-Thr complement(4213856..4213931) Methylomonas methanica MC09 10673799 Metme_R0043 tRNA Metme_R0043 NC_015572.1 4243454 4243529 R tRNA-Trp complement(4243454..4243529) Methylomonas methanica MC09 10673840 Metme_R0044 tRNA Metme_R0044 NC_015572.1 4244790 4244865 R tRNA-Thr complement(4244790..4244865) Methylomonas methanica MC09 10673842 Metme_R0045 tRNA Metme_R0045 NC_015572.1 4244886 4244959 R tRNA-Gly complement(4244886..4244959) Methylomonas methanica MC09 10673843 Metme_R0046 tRNA Metme_R0046 NC_015572.1 4244979 4245063 R tRNA-Tyr complement(4244979..4245063) Methylomonas methanica MC09 10673844 Metme_R0047 tRNA Metme_R0047 NC_015572.1 4247377 4247451 R tRNA-Gln complement(4247377..4247451) Methylomonas methanica MC09 10673848 Metme_R0048 tRNA Metme_R0048 NC_015572.1 4310753 4310828 R tRNA-Glu complement(4310753..4310828) Methylomonas methanica MC09 10673907 Metme_R0049 tRNA Metme_R0049 NC_015572.1 4310887 4310962 R tRNA-Glu complement(4310887..4310962) Methylomonas methanica MC09 10673908 Metme_R0050 tRNA Metme_R0050 NC_015572.1 4310988 4311063 R tRNA-Ala complement(4310988..4311063) Methylomonas methanica MC09 10673909 Metme_R0051 tRNA Metme_R0051 NC_015572.1 4512847 4512922 R tRNA-His complement(4512847..4512922) Methylomonas methanica MC09 10674110 Metme_R0052 tRNA Metme_R0052 NC_015572.1 4512944 4513020 R tRNA-Arg complement(4512944..4513020) Methylomonas methanica MC09 10674111 Metme_R0053 tRNA Metme_R0053 NC_015572.1 4513027 4513103 R tRNA-Pro complement(4513027..4513103) Methylomonas methanica MC09 10674112 Metme_R0054 tRNA Metme_R0054 NC_015572.1 4624446 4624521 D tRNA-Thr 4624446..4624521 Methylomonas methanica MC09 10674222 Metme_R0055 tRNA Metme_R0055 NC_015572.1 4635654 4635723 D tRNA-Thr 4635654..4635723 Methylomonas methanica MC09 10674238 Metme_R0056 tRNA Metme_R0056 NC_015572.1 4694495 4694571 R tRNA-Asp complement(4694495..4694571) Methylomonas methanica MC09 10674282 Metme_R0057 tRNA Metme_R0057 NC_015572.1 4694578 4694653 R tRNA-Val complement(4694578..4694653) Methylomonas methanica MC09 10674283 Metme_R0058 tRNA Metme_R0058 NC_015572.1 4701136 4701219 R tRNA-Leu complement(4701136..4701219) Methylomonas methanica MC09 10674289 Metme_R0001 rRNA Metme_R0001 NC_015572.1 392605 394125 D 16S ribosomal RNA 392605..394125 Methylomonas methanica MC09 10670348 Metme_R0004 rRNA Metme_R0004 NC_015572.1 394792 397684 D 23S ribosomal RNA 394792..397684 Methylomonas methanica MC09 10670351 Metme_R0005 rRNA Metme_R0005 NC_015572.1 397961 398076 D 5S ribosomal RNA 397961..398076 Methylomonas methanica MC09 10670352 Metme_R0009 rRNA Metme_R0009 NC_015572.1 691651 693171 D 16S ribosomal RNA 691651..693171 Methylomonas methanica MC09 10670629 Metme_R0012 rRNA Metme_R0012 NC_015572.1 693838 696730 D 23S ribosomal RNA 693838..696730 Methylomonas methanica MC09 10670632 Metme_R0013 rRNA Metme_R0013 NC_015572.1 697007 697122 D 5S ribosomal RNA 697007..697122 Methylomonas methanica MC09 10670633 Metme_R0016 rRNA Metme_R0016 NC_015572.1 850441 851961 D 16S ribosomal RNA 850441..851961 Methylomonas methanica MC09 10670787 Metme_R0019 rRNA Metme_R0019 NC_015572.1 852628 855520 D 23S ribosomal RNA 852628..855520 Methylomonas methanica MC09 10670790 Metme_R0020 rRNA Metme_R0020 NC_015572.1 855797 855912 D 5S ribosomal RNA 855797..855912 Methylomonas methanica MC09 10670791